BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 001407
         (1083 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255544956|ref|XP_002513539.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223547447|gb|EEF48942.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1403

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 400/1161 (34%), Positives = 584/1161 (50%), Gaps = 176/1161 (15%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            M+ +  V  VGIWGMGGIGKTT AKA+F Q S+E E + FV++VR  SE    +  L+ +
Sbjct: 212  MEFTTNVLFVGIWGMGGIGKTTTAKALFTQISNELEAAYFVANVREESEKRT-VVRLRDE 270

Query: 61   MLSTTLSEK-LEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            +LS  L E+ L +   +I P F   R+RR ++LIVLDDV+ V QL  L G+   FG GSR
Sbjct: 271  ILSNILEEENLHLGMRSILPRFILNRLRRKRILIVLDDVSNVEQLTTLAGDHSWFGSGSR 330

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            +++T+RDK+VL        +IY V GL + EA +      FK+NH  E     S+ VV+Y
Sbjct: 331  VIITSRDKQVL---VNAADRIYEVKGLNYCEALQLLSFKVFKQNHPVEGYIELSKRVVNY 387

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
            TKG PL L VL S L  K++  W   L  L    ES   +I  +LKIS+++L    K IF
Sbjct: 388  TKGVPLALNVLASFLYSKQREEWTSTLEKLE---ESSNLEIQKVLKISYDELEWVDKDIF 444

Query: 239  LDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
            LDIACFF+G D D+V +ILD  +   S  +  L+DKSL++I  N L+MHD+LQEMG+ IV
Sbjct: 445  LDIACFFKGADVDYVTTILDGCDFFPSIGISRLVDKSLIAIIDNKLDMHDLLQEMGQHIV 504

Query: 296  RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
            ++ES + PGK SRLW P+ I  VL  N+GT A EGIFLD+SKI+ ++L   AF+ M NLR
Sbjct: 505  QKESSENPGKNSRLWTPESIHHVLTGNRGTFATEGIFLDISKIEKVDLSSVAFSKMWNLR 564

Query: 356  LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
            L KFY   F   +      +E  L        +GL  LP KL +LHW  YP  +LPSNF 
Sbjct: 565  LLKFYHNSFLSWKNPTGFVSESTLDSR-----DGLQSLPNKLCFLHWHGYPWESLPSNFS 619

Query: 416  PKNLVELNLRCSKVEQPWEGEKAC------------------------------------ 439
             +NLVELN+  S+V++ W G K                                      
Sbjct: 620  MENLVELNMPFSQVKELWTGVKHLQKLKLLDLHDSELLVTLPDLSSASNLEKIILNNCTS 679

Query: 440  ---VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR 496
               +PSSIQ  + L  LS   C+ L+S PS +      T+N S C NL +FP+ISG++  
Sbjct: 680  LLEIPSSIQCLRKLVCLSLSNCKELQSLPSLIPLKYLKTLNLSSCSNLKKFPEISGEIEE 739

Query: 497  LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
            L+L  + +EE PSS++ L  L +L L  C+ LK +  S   L SL  L L  C +L++FP
Sbjct: 740  LHLDGTGLEEWPSSVQYLDKLRLLSLDHCEDLKSLPGSI-HLNSLDNLDLSWCSSLKNFP 798

Query: 557  EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
            +++  +++L       T I ELPSS  +L  L  L ++D +++  LP +IG+L  L  + 
Sbjct: 799  DVVGNIKYLN---VGHTAIEELPSSIGSLVSLTKLNLKD-TEIKELPSSIGNLSSLVELN 854

Query: 617  AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE 676
               S+I +LPSS+   + L  L+ +    +E  P + L  LS++   ++    +  +P  
Sbjct: 855  LKESSIKELPSSIGCLSSLVKLNIA-VVDIEELPSS-LGQLSSLVEFNLEKSTLTALPSS 912

Query: 677  IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP----ELPLCLKYLHL 732
            I  L+SL  L L+    + LP  I  +S L  ++L    ML SLP    EL  CL+ L+L
Sbjct: 913  IGCLTSLVKLNLAVTEIKELPPSIGCLSSLVELNLSQCPMLGSLPFSIGELK-CLEKLYL 971

Query: 733  IDCKMLQSLPVLPFCLESLD---LTGCNMLRSLPELPLC--------------------- 768
               + L+S+P     L+ L    L  C  L  LP L  C                     
Sbjct: 972  CGLRRLRSIPSSIRELKRLQDVYLNHCTKLSKLPSLSGCSSLRDLVLSYSGIVKVPGSLG 1031

Query: 769  ---------------------------LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRL 801
                                       L+ L++  C  L++LPELP  +++L   NC  L
Sbjct: 1032 YLSSLQVLLLKGNNFMRIPATIRQLSWLEVLDISYCKRLKALPELPQRIRVLVAHNCTSL 1091

Query: 802  QSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILA 861
            +++   L+  QE          + SPD ++           F F NC+ L   A + I+ 
Sbjct: 1092 KTVSSPLIQFQESQ--------EQSPDDKYG----------FTFANCVSLEKNARSNIVE 1133

Query: 862  DSLLRIRHMAIASLRL--GYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
             +LL+ +H+A A L L   YE         L   ++  PGSEIP+ F  Q++G+S+   L
Sbjct: 1134 SALLKTQHLATAVLELLTSYEEI-------LVSPVVCFPGSEIPECFRYQNTGASVTTLL 1186

Query: 920  PPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVD-LGYNSRYI 978
            P       L+GF FCAV++ +       R++   F F  + +   E ++ D L + S+ I
Sbjct: 1187 PSKWHNNKLVGFTFCAVIELEN------RHYQDGFTFQCDCRI--ENEYGDSLEFTSKEI 1238

Query: 979  EDL-----IDSDRVILGFKPCLNVGFPDGYHH-----TIATFKF--FAERKF-------- 1018
             +       ++D V L    C+ +   + Y         A F+F  + E ++        
Sbjct: 1239 GEWGNQFEFETDHVFLWNTSCIYILTEERYEQLRKNSCTAIFEFACYTEDEYKVMLPGAN 1298

Query: 1019 -YKIKRCGLCPVYANPSETKD 1038
             +K+K  G  PVYA   +  D
Sbjct: 1299 SFKVKNSGFNPVYAKDEKEWD 1319


>gi|224127917|ref|XP_002329209.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870990|gb|EEF08121.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1470

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 377/1064 (35%), Positives = 545/1064 (51%), Gaps = 163/1064 (15%)

Query: 10   VGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST-TLSE 68
            VGIWGMGG GKTT+A  IF++ + E+EG  F+++VR  SE  GGL  ++ ++ S  T  E
Sbjct: 212  VGIWGMGGTGKTTIAGEIFNKIAREYEGHYFLANVR-ESEKNGGLFRIRDELFSKITEEE 270

Query: 69   KLEVAGPNIPH-FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKR 127
             L +  P I H F K+R+ R K+LIV DDVN+V Q++ L+G  + FG GSRI++T+RDK+
Sbjct: 271  NLHIRTPRIGHPFIKDRICRKKILIVFDDVNDVDQIEMLLGGCESFGPGSRIILTSRDKQ 330

Query: 128  VLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLE 187
            VL+K+     KI+ V GL   EA   F   AFK+N  P +    S   ++Y KGNPL L+
Sbjct: 331  VLKKY---ADKIFEVEGLNHREALHLFSLHAFKDNQPPYNYMELSVRAINYAKGNPLALK 387

Query: 188  VLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEG 247
            VLGSSL  +    W   L+ + ++   ++H +   L+IS+  L    KSIFLDIACFF G
Sbjct: 388  VLGSSLFGRTTKEWESALNKVEKLTRQKVHSV---LRISYEALDSEEKSIFLDIACFFRG 444

Query: 248  EDKDFVASILDDS--ESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPG 304
               DFV  ILD    ++D+   +LID+ L+ IS + + MHD+LQEM   +VR+ES  E G
Sbjct: 445  HRVDFVKRILDGCGFKTDIGFSVLIDRCLIKISDDKVEMHDLLQEMAHDVVRKESLDELG 504

Query: 305  KRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKF 364
             +SRLW PK++ +VL +N GT  +EGIFLD+SKI+ I L   A   M  LRL K Y    
Sbjct: 505  GQSRLWSPKDVYQVLTNNLGTGKVEGIFLDVSKIREIELSSTALGRMYKLRLLKIY---- 560

Query: 365  YEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNL 424
                        E     +V LP+GL+ L ++LRYLHWD YPL +LPSNF+P+NLVE+NL
Sbjct: 561  ----------NSEAGVKCRVHLPHGLESLSEELRYLHWDGYPLTSLPSNFRPQNLVEINL 610

Query: 425  RCSKVEQPWEGEKACV---------------------------------------PSSIQ 445
             CSKV + W G++  V                                       PSSIQ
Sbjct: 611  SCSKVNRLWRGDQNLVNLKDVNLSNCEHITFLPDLSKARNLERLNLQFCTSLVKVPSSIQ 670

Query: 446  NFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIE 505
            +   L  L  +GC+ L + PS ++  C  T+N S C NL + P+ + K+T L L ++A+E
Sbjct: 671  HLDRLVDLDLRGCERLVNLPSRINSSCLETLNLSGCANLKKCPETARKLTYLNLNETAVE 730

Query: 506  EVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHL 565
            E+P SI  L+ L  L+L+ CK L  +  +   L SL+ + + GC ++   P+    + +L
Sbjct: 731  ELPQSIGELSGLVALNLKNCKLLVNLPENMYLLTSLLLVDISGCSSISRLPDFSRNIRYL 790

Query: 566  KRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQL 625
               Y + T I ELPSS  +L  L  L +  CS +   P    +++ LY      +AI ++
Sbjct: 791  ---YLNGTAIEELPSSIGDLRKLIYLNLSGCSSITEFPKVSNNIKELYL---DGTAIREI 844

Query: 626  PSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEI 685
            PSS+     L  L   +CK  E                         +P  I  L  LE 
Sbjct: 845  PSSIDCLFELVELHLRNCKQFEI------------------------LPSSICTLRKLER 880

Query: 686  LYLSGN-NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL-------CL-----KYLHL 732
            L LSG   F   P +++ M  LR+++LE+   +  LP  P+       CL     KYL+ 
Sbjct: 881  LNLSGCLQFRDFPEVLEPMVCLRYLYLEE-TRITKLPS-PIGNLKGLACLEVGNCKYLND 938

Query: 733  IDC----KMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPL 788
            I+C    ++ +    L + L  L+L GC+ +  +P+   CL  L + D +   +   +PL
Sbjct: 939  IECFVDLQLSERWVDLDY-LRKLNLDGCH-ISVVPDSLGCLSSLEVLDLSG-NNFSTIPL 995

Query: 789  C------LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC 842
                   LQ L +RNC RL+SLPE+   L +LDA   E L+        +   +K     
Sbjct: 996  SINKLSELQYLGLRNCKRLESLPELPPRLSKLDADNCESLNYLGSS---SSTVVKGNIFE 1052

Query: 843  FEFTNCLKLNGKANNKILADSLLRIRHM---AIASLRLGYEMAINEKLSELRGSL-IVLP 898
            F FTNCL             SL RI  +   A+   RL Y   +++    L G+    LP
Sbjct: 1053 FIFTNCL-------------SLCRINQILPYALKKFRL-YTKRLHQLTDVLEGACSFFLP 1098

Query: 899  GSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDL 958
            G   P W S+QS GS++  QL  H +    +GF+ CAV+             + SF   L
Sbjct: 1099 GGVSPQWLSHQSWGSTVTCQLSSHWANSKFLGFSLCAVIA------------FHSFGHSL 1146

Query: 959  EIKTLSE--TKHVD-----LGYNSRYIEDLIDSDRVILGFKPCL 995
            ++K       +H D        +  Y E  IDS+ +++GF PCL
Sbjct: 1147 QVKCTYHFSNEHGDSHDLYCYLHGWYDEKRIDSEHILVGFDPCL 1190



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 19/104 (18%)

Query: 899  GSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDL 958
            G   P+WFS+QS GS++  QL  H +    +GF+ CA++             + SF+  L
Sbjct: 1300 GDVTPEWFSHQSWGSTVTCQLSSHWANSEFLGFSLCAIIA------------FHSFKHSL 1347

Query: 959  EIKTLSETKHVDLGYNSRYI-------EDLIDSDRVILGFKPCL 995
            ++K     ++     +  Y        E  IDSD V++GF PCL
Sbjct: 1348 QVKCTYHFRNEHGDSHDLYCYLHEEIDERRIDSDHVLVGFDPCL 1391


>gi|255563202|ref|XP_002522604.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223538080|gb|EEF39691.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1158

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 315/744 (42%), Positives = 439/744 (59%), Gaps = 74/744 (9%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+++GIWGMGGIGKTTLA A+F Q + +FEG CF+S++   S+  GGL  L +++LS  L
Sbjct: 250 VRVLGIWGMGGIGKTTLAGAVFKQIAFQFEGCCFLSNIGKESQKCGGLTRLGEELLSKVL 309

Query: 67  SEK-LEVAGPNI--PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
            E+ +++  P+I   HF KE +R  ++LIVLDDVN + QL+   G+   FG GSRI VT+
Sbjct: 310 KEREVKLNTPDIRSSHF-KEMLRHNRVLIVLDDVNNIEQLEYFAGDPCWFGSGSRIFVTS 368

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           RDK++L          Y V  L +E+A    C  AFK+    ED    +  VV Y +GNP
Sbjct: 369 RDKQLLST---TVDVTYEVKELNYEDALHLVCWNAFKQKSPLEDFVALTHLVVRYARGNP 425

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L L+VLGS L  K K+ WG  L  L R   +   DI DILK +++ L      IFL IAC
Sbjct: 426 LALKVLGSMLYGKSKTEWGSALKKLTR---APHKDIQDILKFTYDNLDDEELDIFLHIAC 482

Query: 244 FFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
            FE ED+D V   LD     +D+ +  L+DKSL++IS N L MHD+LQEMGR+IVRQES 
Sbjct: 483 LFESEDRDRVTQALDGCGFSADIGISTLVDKSLLTISKNKLKMHDLLQEMGREIVRQES- 541

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
           K P +RSRLW+P +I +VL+ N GT+AI GI L +S+ + + L+  AFT +SNL   KF 
Sbjct: 542 KRPSERSRLWNPDDIYKVLEENTGTEAIVGILLGMSEARKLELNRNAFTRISNL---KFL 598

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
           + +            EE+    KVQ P GL+ LP++LRYL+W  YPL+ LP+NF P NL+
Sbjct: 599 ILRMSN----NCGGFEEE---CKVQFPEGLESLPQQLRYLYWHGYPLKFLPANFHPTNLI 651

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
           ELN   S++E  WEG+K  VPSSI     L+ +S +  +++RSFP+ +      T++ S 
Sbjct: 652 ELNFPYSRLEGLWEGDK--VPSSIGQLTKLTFMSLRCSKNIRSFPTTIDLQSLETLDLSG 709

Query: 481 CVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS 540
           C NL  FP++S  +  LYL ++AI+EVP SIE L+ L VL+++ C  L+ I ++  KL+S
Sbjct: 710 CSNLKIFPEVSRNIRYLYLNETAIQEVPLSIEHLSKLVVLNMKNCNELECIPSTIFKLKS 769

Query: 541 LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
           L  LIL GC  LE FPEILE   HL+ +  D T +  LP +F NL  L +L   DCSKL 
Sbjct: 770 LGVLILSGCKKLESFPEILETTNHLQHLSLDETAMVNLPDTFCNLKALNMLNFSDCSKLG 829

Query: 601 NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAM 660
            LP N+ +L+ L  + A    +S LP+                                 
Sbjct: 830 KLPKNMKNLKSLAELRAGGCNLSTLPA--------------------------------- 856

Query: 661 GLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSL 720
                          ++ YLSS+  L LSG+NF+++PA I Q+S+LR+I++     LQSL
Sbjct: 857 ---------------DLKYLSSIVELNLSGSNFDTMPAGINQLSKLRWINVTGCKRLQSL 901

Query: 721 PELPLCLKYLHLIDCKMLQSLPVL 744
           PELP  ++YL+  DC+ L S+  L
Sbjct: 902 PELPPRIRYLNARDCRSLVSISGL 925


>gi|359486075|ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1291

 Score =  491 bits (1263), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 381/1116 (34%), Positives = 540/1116 (48%), Gaps = 195/1116 (17%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG----GLEHLQ 58
             SD V++VGIWGM GIGKTT+A+A++ +   +FEG CF+S+VR  S+        +E L 
Sbjct: 212  GSDDVRMVGIWGMAGIGKTTIAEAVYQKICTQFEGCCFLSNVREKSQKNDPAVIQMELLS 271

Query: 59   KQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            +      L+ ++   G N     K+ +  M++LIVLDDV+   QL+ L G  + FG GSR
Sbjct: 272  QVFWEGNLNTRIFNRGINA---IKKTLHSMRVLIVLDDVDRPQQLEVLAGNHNWFGPGSR 328

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            I++TTR+K +L+    E+ +IY V  L  +EA   F   AFK      D        ++Y
Sbjct: 329  IIITTREKHLLD----EKVEIYEVKELNKDEARRLFYQHAFKYKPPAGDFVQLCDRALNY 384

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
            TKG PL L++LG  L  + K  W   L  L RI   EI D+   L+ISF+ L    K IF
Sbjct: 385  TKGIPLALKILGRFLYNRSKKEWESELEKLRRIPNKEIQDV---LRISFDGLDDNQKDIF 441

Query: 239  LDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
             DIACFF+G+DKD+V  +L   +      +  LIDKSLV+IS N L MHD++QEMG +IV
Sbjct: 442  FDIACFFKGQDKDYVIKLLKSCDFFPEIGIRNLIDKSLVTISYNKLCMHDLIQEMGWEIV 501

Query: 296  RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
            RQES K+PGKRSRLW   ++  +L  N GT+A+EG+ L+LS +K ++     FT M+ LR
Sbjct: 502  RQESMKDPGKRSRLWVNDDVIDMLTTNTGTEAVEGMVLNLSTLKELHFSVNVFTKMNKLR 561

Query: 356  LFKFYVPKFYEIEKLPSMSTEEQLSYS--KVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
            + +FY  + +    +   +   +  Y+  K  L     +L   LR L+WD YPL++LPSN
Sbjct: 562  VLRFYDAQIWGSSWIWRRNDRYKSPYTECKFHLSGDFKFLSNHLRSLYWDGYPLKSLPSN 621

Query: 414  FKPKNLVELNLRCSKVEQPWEGEKA----------------------------------C 439
            F P+ L+EL +  S++EQ WEG K+                                  C
Sbjct: 622  FHPEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHLIKAPDFSGAPKLRRIILEGC 681

Query: 440  -----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG-- 492
                 V  SI   K L  L+ +GC++L+SF S++H      +  S C  L + P++ G  
Sbjct: 682  TSLVKVHPSIGALKKLIFLNLEGCKNLKSFLSSIHLESLQILTLSGCSKLKKLPEVQGAM 741

Query: 493  -KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
              ++ L L  +AI+ +P SIE L  L + +L  CK L+ +     KL+SL TLIL  CL 
Sbjct: 742  DNLSELSLKGTAIKGLPLSIEYLNGLALFNLEECKSLESLPGCIFKLKSLKTLILSNCLR 801

Query: 552  LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL----------------------- 588
            L+  PEI E ME LK ++ D T + ELPSS E+L GL                       
Sbjct: 802  LKKLPEIQENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESICKLTS 861

Query: 589  -EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
             + L +  CS+L  LPD++GSL+ L  + A  S I ++PSS+ L   L+ L  + CKG  
Sbjct: 862  LQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEVPSSITLLTRLQVLSLAGCKGGG 921

Query: 648  SFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
            S  R   L L             R  P +   LSSL +L+                  L+
Sbjct: 922  SKSRNLALSL-------------RASPTDGLRLSSLTVLH-----------------SLK 951

Query: 708  FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLR---SLPE 764
             ++L D N+L+    LP  L  L  ++C               LDL+  N +    SL  
Sbjct: 952  KLNLSDRNLLEG--ALPSDLSSLSWLEC---------------LDLSRNNFITVPTSLSR 994

Query: 765  LPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSK 824
            LP  L+ L +E C  L+SLPELP  ++ L   +C  L++            A  L K   
Sbjct: 995  LPH-LRRLIVEHCKNLQSLPELPSSIKELLANDCTSLETFS------YPSSAYPLRKFGD 1047

Query: 825  HSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAIN 884
             +                FEF+NC +L G   +  +   L  IR +A     +   MA +
Sbjct: 1048 FN----------------FEFSNCFRLVGNEQSDTVEAILQEIRLVA----SIQKSMAPS 1087

Query: 885  E---KLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKK 941
            E   +  E R   +V PGS IP+WF++QS G SI ++LPP     N IG A CAV   K 
Sbjct: 1088 EHSARYGESRYDAVV-PGSRIPEWFTHQSEGDSITVELPPGCYNTNSIGLAACAVFHPKF 1146

Query: 942  VDSDCFRYFYVSFQ----FDLEIKT---LSETKHVDLGYNSRYIEDLIDSDRVILGFKPC 994
                  R  Y S      F L+  T    S+  H+  GY            R+I G    
Sbjct: 1147 SMGKIGRSAYFSVNESGGFSLDNTTSMHFSKADHIWFGY------------RLISG---- 1190

Query: 995  LNVGFPDGYHHTIATFKFFAERKFYKIKRCGLCPVY 1030
              V   D      AT K   E     +K+CG+  VY
Sbjct: 1191 --VDLRDHLKVAFATSKVPGE----VVKKCGVRLVY 1220


>gi|359486073|ref|XP_002272820.2| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1296

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 370/1113 (33%), Positives = 549/1113 (49%), Gaps = 188/1113 (16%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
             SD V++VGIWGM GIGKTT+A+A++ +   +FEG CF+S+VR  S+       +Q ++L
Sbjct: 217  GSDDVRMVGIWGMAGIGKTTIAEAVYQKIRTQFEGCCFLSNVREKSQN-NDPAVIQMKLL 275

Query: 63   ST-----TLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            S       L+  L   G N+    ++ +  M++LIVLDDV+   QL+ L G  + FG GS
Sbjct: 276  SQIFEKGNLNTGLLSGGINV---IEKTLHSMRVLIVLDDVDCPQQLEVLAGNHNWFGPGS 332

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI++TTR+K +L+    E+ +IY V  L  +EA + F   AFK      D        ++
Sbjct: 333  RIIITTREKHLLD----EKVEIYIVKELNKDEARKLFYQHAFKYKPPAGDFVQLCDRALN 388

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
            YTKG PL L++LG  L  + K  W   L  L RI  +EI D+   L+ISF+ L    K I
Sbjct: 389  YTKGIPLALKILGRFLYNRSKKEWESELEKLRRIPNNEIQDV---LRISFDGLDDNQKDI 445

Query: 238  FLDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
            FLDIACFF+G+DKD+V  +L   +      +  LIDKSLV+IS N L MHD++Q+MG +I
Sbjct: 446  FLDIACFFKGQDKDYVIKLLKSCDFFPEIGIRNLIDKSLVTISYNKLCMHDLIQKMGWEI 505

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            VRQES K+PGKRSRLW   ++  +L  N GT+A+EG+ L+LS +K ++     FT M+ L
Sbjct: 506  VRQESIKDPGKRSRLWVNDDVIDMLTTNTGTEAVEGMVLNLSTLKELHFSVNVFTKMNKL 565

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYS--KVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            R+ +FY  + +    +   +   +  Y+  K  L     +L   LR L+WD YPL++LPS
Sbjct: 566  RVLRFYDAQIWGSSWIWRRNDRYKSPYTECKFHLSGDFKFLSNHLRSLYWDGYPLKSLPS 625

Query: 413  NFKPKNLVELNLRCSKVEQPWEGEKA---------------------------------- 438
            NF P+ L+EL +  S++EQ WEG K+                                  
Sbjct: 626  NFHPEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHLIKTPDFSGAPKLRRIILEG 685

Query: 439  C-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
            C     V  SI   K L  L+ +GC++L+SF S++H      +  S C  L +FP++ G 
Sbjct: 686  CTSLVKVHPSIGALKKLIFLNLEGCKNLKSFLSSIHLESLQILTLSGCSKLKKFPEVQGP 745

Query: 494  V---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
            +   + L L  +AI+ +P SIE L  L +L+L  CK L+ + +   KL+SL TLIL  C 
Sbjct: 746  MDNFSELSLKGTAIKGLPLSIEYLNGLALLNLEECKSLESLPSCIFKLKSLKTLILSNCS 805

Query: 551  NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL---------------------- 588
             L+  PEI E ME LK ++ D T + ELPSS E+L GL                      
Sbjct: 806  RLKKLPEIGENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESFCKLT 865

Query: 589  --EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
              + L +  CS+L  LPD++GSL+ L  + A  S I ++P+S+ L   L+ L  + CKG 
Sbjct: 866  SLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEVPTSITLLTKLQVLSLAGCKGG 925

Query: 647  ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
             S  +   L L             R  P +   LSSL +L+                  L
Sbjct: 926  GSKSKNLALSL-------------RASPTDGLRLSSLTVLH-----------------SL 955

Query: 707  RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLR--SLPE 764
            + ++L D N+L+    LP  L  L  ++C               LDL+  + +   SL  
Sbjct: 956  KKLNLSDCNLLEG--ALPSDLSSLSWLEC---------------LDLSRNSFITVPSLSR 998

Query: 765  LPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSK 824
            LP  L+ L LE C  LRSLPELP  ++ L   +C                  + LE +S 
Sbjct: 999  LPR-LERLILEHCKSLRSLPELPSSVEELLANDC------------------TSLETISN 1039

Query: 825  HSPDLQWAPESLKSAAICFEFTNCLKL--NGKANNKILADSLLRIRHMAIASLRLGYEMA 882
             S    W      S  +  EF NC +L  N +++N    +++LR        +RL   + 
Sbjct: 1040 PSSAYAWR----NSGHLYSEFCNCFRLVENEQSDN---VEAILR-------GIRLVASIP 1085

Query: 883  INEKLSELRGSL-----IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
             +   S+++  L      V+PGS IP+WF++QS   S+ ++LPPH     L+G A C V 
Sbjct: 1086 NSVAPSDIQRDLSIVYDAVVPGSSIPEWFTHQSERCSVTVELPPHWCNTRLMGLAVCVVF 1145

Query: 938  DSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNV 997
             +        R  Y S     E    S    V + ++         +D +  G++P    
Sbjct: 1146 HANIGMGKFGRSAYFSMN---ESGGFSLHNTVSMHFSK--------ADHIWFGYRPLFGD 1194

Query: 998  GFPDGYHHTIATFKFFAERKFYKIKRCGLCPVY 1030
             F     H   +F   + R    +K+CG+  V+
Sbjct: 1195 VFSSSIDHLKVSFA-GSNRAGEVVKKCGVRLVF 1226


>gi|451798990|gb|AGF69193.1| TMV resistance protein N-like protein 7 [Vitis labrusca]
          Length = 1335

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 389/1146 (33%), Positives = 549/1146 (47%), Gaps = 191/1146 (16%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V++VGIWGM GIGKTT+AK I+++   +FEG CF+S+VR  S   G L +LQ ++LS  L
Sbjct: 211  VRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREESYKHG-LPYLQMELLSQIL 269

Query: 67   SEKLEVAG--PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
             E+   AG      +F K+ +   K+LI+LDDV++  QL+ L G+ + FG GSRI++TTR
Sbjct: 270  KERNPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRKQLEDLAGDNNWFGSGSRIIITTR 329

Query: 125  DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
            D+ +L     E   IY V  L+ +EA + FC +AF+  H  ED        + YT G PL
Sbjct: 330  DRHLLTC--QEVDAIYEVKELDNDEALKLFCLYAFRHKHGTEDFRQLCGHALDYTSGLPL 387

Query: 185  VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
             L+VLGSSL  K    W   L  L +    E+ ++   LK SF  L    ++IFLDIA F
Sbjct: 388  ALKVLGSSLYTKGIHEWKSELDKLKQFPNKEVQNV---LKTSFEGLDDNEQNIFLDIAFF 444

Query: 245  FEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
            ++G DKDFV  ILD         +  L DKSL++IS N L MHD+LQEMG +IVRQ+SE 
Sbjct: 445  YKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISENKLCMHDLLQEMGWEIVRQKSEV 504

Query: 302  EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF-- 359
             PG+RSRL   ++I+ VL  N GT+A+EGIFLDLS  K +N    AFT M  LRL K   
Sbjct: 505  -PGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSASKELNFSIDAFTKMKRLRLLKICN 563

Query: 360  --------YVPKFYEIEKLPSMSTEEQLSYS--KVQLPNGLDYLPKKLRYLHWDTYPLRT 409
                    Y+ K   I     +  E    Y+  K+ L     +L   LR L+W  YPL++
Sbjct: 564  VQIDRSLGYLSKKELIAYTHDVWIERNYLYTQNKLHLYEDSKFLSNNLRDLYWHGYPLKS 623

Query: 410  LPSNFKPKNLVELNLRCSKVEQPWEGEK----------------------ACVPS----- 442
             PSNF P+ LVELN+  S+++QPWEG+K                      + VP+     
Sbjct: 624  FPSNFHPEKLVELNMCFSRLKQPWEGKKGFEKLKSIKLSHSQHLTKIPDFSGVPNLRRLI 683

Query: 443  ------------SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
                        SI   K L  L+ +GC+ L+SF S++H      +  S C  L +FP++
Sbjct: 684  LKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESLQILTLSGCSKLKKFPEV 743

Query: 491  SGKVTRL---YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL 547
             G +  L    L  +AI+ +P SIE LT L +L+L+ CK L+ +  S  KL+SL TLIL 
Sbjct: 744  QGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLKSLKTLILS 803

Query: 548  GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC----------- 596
             C  L+  PEI E ME L  ++ D + I ELPSS   L GL  L +++C           
Sbjct: 804  NCTRLKKLPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFC 863

Query: 597  -------------SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
                         S+L +LPDN+GSL+ L  + A  S + ++P S+ L   L+ L  + C
Sbjct: 864  ELTSLRTLTLCGCSELKDLPDNLGSLQCLTELNADGSGVQEVPPSITLLTNLQILSLAGC 923

Query: 644  KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
            KG ES  R  +             ++    P E   L S   LY       SL  +I Q 
Sbjct: 924  KGGESKSRNMI-------------FSFHSSPTEELRLPSFSGLY-------SLRVLILQR 963

Query: 704  SQLRFIHL-EDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSL 762
              L    L  D   + SL  L L              S   +P       L+G + LRSL
Sbjct: 964  CNLSEGALPSDLGSIPSLERLDLSR-----------NSFITIP-----ASLSGLSRLRSL 1007

Query: 763  PELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKL 822
                       LE C  L+SLPELP  ++ L   +C  L++             S     
Sbjct: 1008 ----------TLEYCKSLQSLPELPSSVESLNAHSCTSLETFT----------CSSSAYT 1047

Query: 823  SKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMA 882
            SK   DL+            F FTNC +L     + I+   L  I+ M+     L  +  
Sbjct: 1048 SKKFGDLR------------FNFTNCFRLGENQGSDIVGAILEGIQLMSSIPKFLVPDRG 1095

Query: 883  INEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKV 942
            I    +E      ++PG+ IP+WF +QS G S+ I+LP H     L+G AFCA L+ K  
Sbjct: 1096 IPTPHNEYNA---LVPGNRIPEWFRHQSVGCSVNIELPQHWYNTKLMGLAFCAALNFKGA 1152

Query: 943  -----DSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYI----EDLIDSDRVILGF-- 991
                  ++   +  V +  D  ++T         G +S Y        I+SD  +  +  
Sbjct: 1153 MDGNPGTEPSSFGLVCYLNDCFVET---------GLHSLYTPPEGSKFIESDHTLFEYIS 1203

Query: 992  ----KPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGLCPVYANPSETKDNTFTINFAT 1047
                + CL   F     + +A+F         ++K+CG+  VY    + KD   +  F T
Sbjct: 1204 LARLEICLGNWFRKLSDNVVASFALTGSDG--EVKKCGIRLVYE--EDEKDGGCSFPFGT 1259

Query: 1048 EVWKLD 1053
              W  D
Sbjct: 1260 -TWPGD 1264


>gi|224145021|ref|XP_002325498.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862373|gb|EEE99879.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1561

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 368/1075 (34%), Positives = 540/1075 (50%), Gaps = 170/1075 (15%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNI- 77
            KTT+A+A F   S ++EG  F+ ++R  SE  G L  L+  +LS  L E+ L V  P+I 
Sbjct: 222  KTTIAEAFFYSISSQYEGCHFLPNIRQESE-KGPLSDLRDDLLSKLLEEENLRVGTPHIG 280

Query: 78   PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
            P F ++R+ + K+L+VLDDVN+  Q ++LI E+   G GS +VVT+RDK+VL+    E  
Sbjct: 281  PTFIRDRLCQKKVLLVLDDVNDARQFQQLI-EVPLIGAGSVVVVTSRDKQVLKNVADE-- 337

Query: 138  KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
             IY V  L   EA E F   AFK NH P+     S + ++Y KGNPL L VLGS L  + 
Sbjct: 338  -IYEVEELNSHEALELFSLIAFKGNHPPKSYMELSITAINYAKGNPLALRVLGSFLIRRE 396

Query: 198  KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR-VKSIFLDIACFFEGEDKDFVASI 256
            +  W   L+++    E    +I D+L+I F+ L     KSIFLDIACFF G   DFV  I
Sbjct: 397  RHFWESQLNNIESFPEL---NICDLLRIGFDALRDNNTKSIFLDIACFFRGHQVDFVKRI 453

Query: 257  LDDS--ESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
            LD    ++D+   +LID+ L+  S + + MHD+LQEM  ++VR+ES  E G +SR W PK
Sbjct: 454  LDGCGFKTDIGFSVLIDRCLIKFSDDKVQMHDLLQEMAHEVVRKESLNELGGQSRSWSPK 513

Query: 314  EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
            ++ +VL +N+GT  +EGIFLD+SKI+ I L   A   M  LRL K Y             
Sbjct: 514  DVYQVLTNNQGTGKVEGIFLDVSKIREIELSSTALERMYKLRLLKIY------------- 560

Query: 374  STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
               E     +V LP+GL+ L ++LRYLHWD YPL +LPSNF+P+NLVE+NL CSKV + W
Sbjct: 561  -NSEAGVKCRVHLPHGLESLSEELRYLHWDGYPLTSLPSNFRPQNLVEINLSCSKVNRLW 619

Query: 434  EGEKACV---------------------------------------PSSIQNFKYLSALS 454
             G +  V                                       PSS+Q+   L  L 
Sbjct: 620  RGHQNLVNLKDVNLSNCEHITFMPDLSKARNLERLNLQFCTSLVKFPSSVQHLDKLVDLD 679

Query: 455  FKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECL 514
             +GC+ L + PS ++  C  T+N S C NL + P+ + K+T L L ++A+EE+P SI  L
Sbjct: 680  LRGCKRLINLPSRINSSCLETLNVSGCANLKKCPETARKLTYLNLNETAVEELPQSIGEL 739

Query: 515  TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTP 574
              L  L+L+ CK L  +  +   L+SL+   + GC ++   P+    + +L   Y + T 
Sbjct: 740  NGLVALNLKNCKLLVNLPENMYLLKSLLIADISGCSSISRLPDFSRNIRYL---YLNGTA 796

Query: 575  ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
            I ELPSS  +L  L  L +  C++L NLP                SA+S+L         
Sbjct: 797  IEELPSSIGDLRELIYLDLGGCNRLKNLP----------------SAVSKLVC------- 833

Query: 635  LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNF 693
            L  LD S C  +  FP+      + +  L+++  A+REIP  I  L  L  L+L     F
Sbjct: 834  LEKLDLSGCSNITEFPKVS----NTIKELYLNGTAIREIPSSIECLFELAELHLRNCKQF 889

Query: 694  ESLPAIIKQMSQLRFIHLEDFNMLQSLPEL---PLCLKYLHLIDCKMLQSLPVLPF---- 746
            E LP+ I ++ +L+ ++L      +  PE+    +CL+YL+L   ++ + LP  P     
Sbjct: 890  EILPSSICKLRKLQRLNLSGCVQFRDFPEVLEPMVCLRYLYLEQTRITK-LPS-PIGNLK 947

Query: 747  CLESLDLTGCNMLRSLP-----ELPL-----CLQYLNLEDC------------------- 777
             L  L++  C  LR +      +LP      CL+ LNL+ C                   
Sbjct: 948  GLACLEVGNCQHLRDIECIVDLQLPERCKLDCLRKLNLDGCQIWEVPDSLGLVSSLEVLD 1007

Query: 778  ---NMLRSLP---ELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQW 831
               N  RS+P        LQ L +RNC  L+SLPE+   L +LDA     L      +  
Sbjct: 1008 LSGNNFRSIPISINKLFELQYLGLRNCRNLESLPELPPRLSKLDADNCWSLRT----VSC 1063

Query: 832  APESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMA-INEKLSEL 890
            +  +++     F FTNC +L  +  N+IL  SLL+ +   + + RL +++  + E+    
Sbjct: 1064 SSTAVEGNIFEFIFTNCKRL--RRINQILEYSLLKFQ---LYTKRLYHQLPDVPEEACSF 1118

Query: 891  RGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLD----SKKVDSDC 946
                  LPG   P+WFS+QS GS +  QL  H +    +GF+ CAV+     S  +   C
Sbjct: 1119 -----CLPGDMTPEWFSHQSWGSIVTFQLSSHWAHTKFLGFSLCAVIAFHSFSHSLQVKC 1173

Query: 947  FRYFYVSFQFDLEIKTLSETKHVDLG------YNSRYIEDLIDSDRVILGFKPCL 995
              +F+       +   L    HV  G       +  Y E  I+S  + +G  PCL
Sbjct: 1174 TYHFHNEHG---DSHDLYCYLHVCYGNDLYCYLHDWYGEKRINSKHIFVGLDPCL 1225



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 27/182 (14%)

Query: 874  SLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPH-SSCRNLIGFA 932
            S  L +EM ++  +S    S   LPG   P+WFS+Q  GS++   L    ++ ++ +GF 
Sbjct: 1335 SEELYHEMPMSYTMSSRECSSFYLPGDVTPEWFSHQRWGSTVTFHLSSQWANSKSFLGFC 1394

Query: 933  FCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHV--------DLGYNSR--YIEDLI 982
             CAV+             + SF   L++K    T H         DL +  R  Y ++ I
Sbjct: 1395 LCAVIA------------FCSFGHSLQVKC---TYHFCNEHGDSHDLYFYLRDWYDKECI 1439

Query: 983  DSDRVILGFKPCLNVGFPDGY-HHTIATFKFFAERKFYKIKRCGLCPVYANPSETKDNTF 1041
            +S  + +GF PCL     D +  ++  + +F     +  +    LC VY       D  +
Sbjct: 1440 NSTHIFVGFDPCLVAKEKDMFSEYSEVSVEFQPADIYGNLLPLNLCQVYECGVRPLDTEY 1499

Query: 1042 TI 1043
             I
Sbjct: 1500 EI 1501


>gi|225448053|ref|XP_002273151.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1468

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 377/1097 (34%), Positives = 537/1097 (48%), Gaps = 167/1097 (15%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVR----GNSETAGGLEHLQK 59
            SD VQ+VGIWGM GIGK+T+AK ++ +   +FEG CF+S+VR     N      +E L +
Sbjct: 213  SDDVQMVGIWGMAGIGKSTIAKVVYQKIRTQFEGYCFLSNVREKSLKNDPADMQMELLSQ 272

Query: 60   QMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
                  L+ ++   G N     K  +  MK+L+VLDDV+   QL+ L G  + FG GS+I
Sbjct: 273  IFWEGNLNTRIFNRGINA---IKNTLHSMKVLVVLDDVDCPQQLEVLAGNHNWFGLGSQI 329

Query: 120  VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
            ++TTR+K +L+    E+ +IY V  L   EA   FC  AFK     ED        ++YT
Sbjct: 330  IITTREKNLLD----EKTEIYEVKELNNSEAHMLFCQHAFKYKPPTEDFVQLCDCALNYT 385

Query: 180  KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            KG PL L++LG SL  + K  W   L  L RI    I D+   L+ISF+ L    K IFL
Sbjct: 386  KGIPLALKILGCSLYNRSKKEWESELEKLKRIPNKAIQDV---LRISFDGLDNNQKDIFL 442

Query: 240  DIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
            DIACFF+G+DKD+   I    +      +  LIDKSLV+IS N L MHD++QEMG +IVR
Sbjct: 443  DIACFFKGQDKDYTTKIQKSCDFFPEIGIRNLIDKSLVTISYNKLCMHDLIQEMGWEIVR 502

Query: 297  QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
            QES K+PGKRSRLW  +++  +L  N GT+A+EGI LDLS +K ++     FT M+ LR+
Sbjct: 503  QESIKDPGKRSRLWVTEDVIHMLTTNIGTEAVEGIVLDLSALKELHFSVDVFTKMNRLRV 562

Query: 357  FKFYVPKFYEI-----EKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
             +F   +  EI     ++    S + Q    K+ L     +L   L+ LHWD YP ++LP
Sbjct: 563  LRFCNAQICEIWDYAWKRGNYDSCKNQYPKCKLHLYGDFKFLSNNLKSLHWDGYPSKSLP 622

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGEKA--------------------------------- 438
            S F P+ LVEL +  S++EQ WEG K+                                 
Sbjct: 623  STFHPEKLVELKMSFSRLEQLWEGNKSFQKLKFIKLSHSQHLIKTPDFSGAPNLRRIILV 682

Query: 439  -C-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
             C     V  SI   K L  L  +GC++L+SF S++H      +N + C  L +FP++ G
Sbjct: 683  GCTSLVKVHPSIGALKKLIFLDLEGCKNLKSFSSSIHMESLQILNLAGCSKLKKFPEVQG 742

Query: 493  ---KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
                +  L L  +AI+ +P SIE L  L +L+L  CK L+ + +   KL+SL TLIL  C
Sbjct: 743  AMYNLPELSLKGTAIKGLPLSIEYLNGLALLNLGECKSLESLPSCIFKLKSLKTLILSNC 802

Query: 550  LNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
            L L+  PEI E ME LK ++ D T + ELPSS E+L  L +L +++C KL +LP++I  L
Sbjct: 803  LRLKKLPEIRENMESLKELFLDDTGLRELPSSIEHLNELVLLQMKNCKKLASLPESIFKL 862

Query: 610  EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA 669
            +                        L++L  S+C  L+  P      + ++  L + D  
Sbjct: 863  K-----------------------SLKTLTISNCLRLKKLPE-IRENMESLKELFLDDTG 898

Query: 670  VREIPQEIAYLSS-LEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLK 728
            +RE+P  I +L+  + +   +     SLP  I +++ L+ + L   + L+ LP+    L+
Sbjct: 899  LRELPSSIEHLNGLVLLKLKNCKKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQ 958

Query: 729  YLHLIDCK--MLQSLP---VLPFCLESLDLTGC--------NMLRSLPELP--------- 766
             L  ++     +Q +P    L   L+ L LTGC        N+  SL   P         
Sbjct: 959  CLVKLESNGSGIQEVPTSITLLTNLQVLSLTGCKGGESKSRNLALSLRSSPTEGFRLSSL 1018

Query: 767  ---LCLQYLNLEDCNMLR---------------------------SLPELPLCLQLLTVR 796
                 L+ LNL DCN+L                            SL  LP  L+ L + 
Sbjct: 1019 TALYSLKELNLSDCNLLEGALPSDLSSLSWLERLDLSINSFITVPSLSRLPQ-LERLILE 1077

Query: 797  NCNRLQSLPEILLCLQEL---DASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNG 853
            +C  LQSLPE+   + EL   D + LE +S  S          K     FEF NC +L  
Sbjct: 1078 HCKSLQSLPELPSSIIELLANDCTSLENISYLSSGFVLR----KFCDFNFEFCNCFRLME 1133

Query: 854  KANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELR--GSLI----VLPGSEIPDWFS 907
               +  L   LL IR  A  +     +       S LR   S I    V+PGS IP+WF+
Sbjct: 1134 NEQSDTLEAILLAIRRFASVT-----KFMDPMDYSSLRTFASRIPYDAVVPGSSIPEWFT 1188

Query: 908  NQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFY------VSFQFDLEIK 961
            +QS G S+ ++LPPH     LIG A CAV           R  Y      V F  D    
Sbjct: 1189 DQSVGCSVTVELPPHWYTTRLIGLAVCAVFHPNISKGKFGRSAYFSMNESVGFSIDNTAS 1248

Query: 962  T-LSETKHVDLGYNSRY 977
               S+ +H+  GY S +
Sbjct: 1249 MHFSKAEHIWFGYRSLF 1265


>gi|224145030|ref|XP_002325501.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862376|gb|EEE99882.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1435

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 375/1086 (34%), Positives = 541/1086 (49%), Gaps = 187/1086 (17%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKL-EVAGPNIP 78
            KTT+A A +D FS ++EG  F+ ++R  SE  G L  L+ ++LS  L E+   V  P+IP
Sbjct: 222  KTTIAGAFYDSFSSQYEGHHFLPNIRQESE-KGRLNDLRDELLSKLLEEENLRVGTPHIP 280

Query: 79   HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
             F ++R+ + K+L+VLDDVN+V Q + L  E+   G GS +VVT+RDK+VL+    E   
Sbjct: 281  TFIRDRLCQKKVLLVLDDVNDVRQFQHL-NEVPLIGAGSVVVVTSRDKQVLKNVVDE--- 336

Query: 139  IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            IY V  L   EA + F   AFK NH P+     S + ++Y KGNPL L VLGS L  + +
Sbjct: 337  IYEVGELNSHEALQLFSLNAFKGNHPPKAYMELSITAINYAKGNPLALRVLGSFLFNRER 396

Query: 199  SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR-VKSIFLDIACFFEGEDKDFVASIL 257
              W   L+++    E    +I D+L+I F+ L     KSIFLDIACFF G   DFV  IL
Sbjct: 397  HFWESQLNEIESFPEL---NICDLLRIGFDALRDNNTKSIFLDIACFFRGHRVDFVKRIL 453

Query: 258  DDS--ESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
            D    ++D+   +LID+ L+ IS + + MHD+LQEM  ++VR+ES  E  K+SRLW+PK+
Sbjct: 454  DGCGFKTDIGFSVLIDRCLIKISDDKVEMHDLLQEMAHEVVRKESAYELRKQSRLWNPKD 513

Query: 315  ISRVLKHNKGTDAIEGIFLDLSKIKG---------------INLDPRAFTNMSNLRLFKF 359
              +VL +N GT  +EGIFLD+SKI+                I L   AF  M NLRL K 
Sbjct: 514  AYQVLTNNLGTGKVEGIFLDVSKIRTEKVEGMFLDVSEIREIELSSTAFARMYNLRLLKI 573

Query: 360  YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
            Y           S + ++      V LP+GL+ L  +LRYLHWD YPL +LP NF+P+NL
Sbjct: 574  Y----------NSAAGDK----CTVHLPSGLESLSHELRYLHWDGYPLTSLPCNFRPQNL 619

Query: 420  VELNLRCSKVEQPWEGEKAC---------------------------------------V 440
            VELNL  SKV+Q W G++                                          
Sbjct: 620  VELNLSSSKVKQLWRGDQNLGNLKDVNLSNCEHITFLPDLSKARNLERLNLQFCKSLVKF 679

Query: 441  PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLG 500
            PSSIQ+   L  L  +GC+ L + PS ++  C  T+N S C NL + P+ +GK+T L L 
Sbjct: 680  PSSIQHLDKLVDLDLRGCKRLINLPSRINSSCLETLNLSGCANLKKCPETAGKLTYLNLN 739

Query: 501  QSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILE 560
            ++A+EE+P SI  L+ L  L+L+ CK +  +  +   L+SL+ + + GC ++  FP+   
Sbjct: 740  ETAVEELPQSIGELSGLVTLNLKNCKLVLNLPENIYLLKSLLIVDISGCSSISRFPDFSW 799

Query: 561  KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAAS 620
             + +L   Y + T I ELPSS   L  L  L +  C++L NLP                S
Sbjct: 800  NIRYL---YLNGTAIEELPSSIGGLRELIYLDLVGCNRLKNLP----------------S 840

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
            A+S+L         L  LD S C  +  FP+        +  L++   A+REIP  I  L
Sbjct: 841  AVSKL-------GCLEKLDLSGCSSITEFPKVS----RNIRELYLDGTAIREIPSSIECL 889

Query: 681  SSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL---PLCLKYLHL---- 732
              L  L+L     FE LP+ I ++ +LR ++L      +  PE+    +CL+YL+L    
Sbjct: 890  CELNELHLRNCKQFEILPSSICKLKKLRRLNLSGCLQFRDFPEVLEPMVCLRYLYLEQTR 949

Query: 733  -------------------IDCKMLQSLPVLPF------------CLESLDLTGCNMLRS 761
                                +CK L+ +                 CL  L+L GC++   
Sbjct: 950  ITKLPSPIGNLKGLACLEVGNCKYLEDIHCFVGLQLSKRHRVDLDCLRKLNLDGCSLSEV 1009

Query: 762  LPELPL--CLQYLNLEDCNMLRSLP---ELPLCLQLLTVRNCNRLQSLPEILLCLQELDA 816
               L L   L+ L+L   N LR++P        LQ L +RNC RLQSLPE+   L +LD 
Sbjct: 1010 PDSLGLLSSLEVLDLSG-NNLRTIPISINKLFELQYLGLRNCKRLQSLPELPPRLSKLDV 1068

Query: 817  SVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLR 876
               + L+     +  +   ++     F FTNCL+L     N+IL  SLL+ +   + + R
Sbjct: 1069 DNCQSLNYL---VSRSSTVVEGNIFEFIFTNCLRL--PVVNQILEYSLLKFQ---LYTKR 1120

Query: 877  LGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAV 936
            L +++     + E   S   LPG   P+WFS+QS GS    QL  H      +GF+ CAV
Sbjct: 1121 LYHQLP---DVPEGACSF-CLPGDVTPEWFSHQSWGSIATFQLSSHWVNSEFLGFSLCAV 1176

Query: 937  LDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYI-------EDLIDSDRVIL 989
            +         FR    S    L++K     ++     + RY        E  IDS  + +
Sbjct: 1177 I--------AFR----SISHSLQVKCTYHFRNEHGDSHDRYCYLYGWYDEKRIDSAHIFV 1224

Query: 990  GFKPCL 995
            GF PCL
Sbjct: 1225 GFDPCL 1230


>gi|359487015|ref|XP_003633506.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1610

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 379/1113 (34%), Positives = 547/1113 (49%), Gaps = 170/1113 (15%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S+ V++VGI+G GGIGKTT+AK ++++   +F  + F+++VR +S++ G L +LQKQ+L 
Sbjct: 418  SNNVRMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANVREDSKSRG-LLYLQKQLLH 476

Query: 64   TTLSEK---LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
              L ++   +      I H  K+R+   K+L+VLDDV+++ QL+ L G+ + FG GSRI+
Sbjct: 477  DILPKRKNFIRNVDEGI-HMIKDRLCFKKVLLVLDDVDDLNQLEALAGDHNWFGPGSRII 535

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            VTTRDK +LE    E   +Y    L+ +EA E FC  AFK+NH  ED    S SVV Y  
Sbjct: 536  VTTRDKHLLEVH--EMDALYEAKKLDHKEAVELFCWNAFKQNHPKEDYKTLSNSVVHYVN 593

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            G PL L+VLG  L  K    W   L  L R    EI  +   LK S++ L    + IFLD
Sbjct: 594  GLPLGLKVLGCFLYGKTICQWESELQKLQREPNQEIQRV---LKRSYDVLDYTQQQIFLD 650

Query: 241  IACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
            +ACFF GEDKDFV  ILD         + +L DK  ++I  N + MHD+LQ+MGR IVRQ
Sbjct: 651  VACFFNGEDKDFVTRILDACNFYAKSGIGVLGDKCFITILDNKIWMHDLLQQMGRDIVRQ 710

Query: 298  ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
            E  K+PGK SRL  P+ ++RVL    GT+AIEGI L+LS++  I++   AF  M NLRL 
Sbjct: 711  ECPKDPGKWSRLCYPEVVNRVLTRKMGTEAIEGILLNLSRLTRIHITTEAFVMMKNLRLL 770

Query: 358  KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
            K Y    +++E   +   E+    +KV+L    ++   +LRYLHW  YPL +LP  F  +
Sbjct: 771  KIY----WDLES--AFMRED----NKVKLSKDFEFPSYELRYLHWHGYPLESLPLGFYAE 820

Query: 418  NLVELNLRCSKVEQPWEGE----------KAC------VPSSIQNFKYLSALSFKGCQSL 461
            +LVEL++  S +++ WEG+           +C      +P  I +   L  L   GC SL
Sbjct: 821  DLVELDMCYSSLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDIIVSAPNLEKLILDGCSSL 880

Query: 462  RS------------------------FPSNLHFVCPVTINFSYCVNLIEFPQISGKVT-- 495
                                      FPS +       +NFS C  L +FP I G +   
Sbjct: 881  LEVHPSIGKLNKLILLNLKNCKKLICFPSIIDMKALEILNFSSCSGLKKFPNIQGNMENL 940

Query: 496  -RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
              LYL  +AIEE+PSSI  LT L +LDL+ CK LK + TS CKL+SL  L L GC  LE 
Sbjct: 941  LELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSGCSKLES 1000

Query: 555  FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
            FPE+ E M++LK +  D TPI  LP S E L GL +L +  C  L +L + + +L     
Sbjct: 1001 FPEVTENMDNLKELLLDGTPIEVLPLSIERLKGLILLNLRKCKNLVSLSNGMCNL----- 1055

Query: 615  ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP 674
                                L +L  S C  L + PR  L  L  +  LH    A+ + P
Sbjct: 1056 ------------------TSLETLIVSGCSQLNNLPRN-LGSLQRLAQLHADGTAIAQPP 1096

Query: 675  QEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ-SLPELPLCLKY---L 730
              I  L +L++L   G    + P  +  +     +H    N +   LP      +    L
Sbjct: 1097 DSIVLLRNLQVLIYPGCKILA-PNSLGSLFSFWLLHGNSSNGIGLRLPSSFSSFRSLSNL 1155

Query: 731  HLIDCKMLQSLPVLPFC----LESLDLTGCNMLRSLP----ELPLCLQYLNLEDCNMLRS 782
             + DCK+++       C    L+ LDL+  N L S+P    EL   L+ L L  C  L  
Sbjct: 1156 DISDCKLIEGAIPNGICSLISLKKLDLSRNNFL-SIPAGISELT-NLKDLRLGQCQSLTG 1213

Query: 783  LPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC 842
            +PELP  ++ +   NC  L      +  LQ L                            
Sbjct: 1214 IPELPPSVRDIDAHNCTALLPGSSSVSTLQGLQ--------------------------- 1246

Query: 843  FEFTNCLKLNGKANNKILADSLLRIRHMAIASL----RLGYEMAINEKLSELRGSLIVLP 898
            F F NC K     ++      L    H+ ++S      +     + +KL E     IV P
Sbjct: 1247 FLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASESSVTTSPVMMQKLLENIAFSIVFP 1306

Query: 899  GSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSK------KVDSDCFRYFYV 952
            G+ IPDW  +Q+ GSSI IQLP      + +GFA C+VL+         ++SD F Y   
Sbjct: 1307 GTGIPDWIWHQNVGSSIKIQLPTDWYSDDFLGFALCSVLEHLPERIICHLNSDVFDY--- 1363

Query: 953  SFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGF-----PDGYHHTI 1007
                DL+          D G++  +  +++ S+ V LG++PC  +       P+ ++H  
Sbjct: 1364 ---GDLK----------DFGHDFHWTGNIVGSEHVWLGYQPCSQLRLFQFNDPNEWNHIE 1410

Query: 1008 ATFKFFAERKFYK-----IKRCGLCPVYANPSE 1035
             +F+  A  +F       +K+CG+C +YA   E
Sbjct: 1411 ISFE--AAHRFNSSASNVVKKCGVCLIYAEDLE 1441


>gi|359493273|ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1233

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 376/1079 (34%), Positives = 538/1079 (49%), Gaps = 153/1079 (14%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL---SEKLEVAGPN 76
            KTT+AK +++  S +FEG  F++++R  S+  G L  LQKQ+L   L   S+++      
Sbjct: 225  KTTIAKVVYNLISSQFEGISFLANIREVSKNCGLLP-LQKQLLGDILMGWSQRISNLDEG 283

Query: 77   IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
            I +   +R+   K+LI+LDDV+++ QL+ L G +D FG GSRIV+TTRDK +L      E
Sbjct: 284  I-NVLMDRLHSKKVLIILDDVDDLNQLESLAGNVDWFGIGSRIVITTRDKHLLNVHGVSE 342

Query: 137  KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
              IY    LE EEA + F  +AFK     +D    S +VV Y KG PL L+VLGS L  K
Sbjct: 343  --IYEAKELEPEEALQLFSQYAFKRKSPDKDYMNLSDNVVHYAKGLPLALKVLGSFLFSK 400

Query: 197  RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
                W   LH L +   +++ D+   L+ISF+ L    K IFLD+ACFF+G++ DFV  I
Sbjct: 401  TILEWESELHKLKKELNTKVQDV---LRISFDGLDFTQKEIFLDLACFFKGQEYDFVIKI 457

Query: 257  LDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
            LD         + +L D+ L+ +  N L MHD++Q+MG +IVRQE  K+PGK SRLWD +
Sbjct: 458  LDGCGFHAKSGIRVLSDRCLIDLLDNRLWMHDLIQQMGWEIVRQECPKDPGKWSRLWDYE 517

Query: 314  EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
             I  VLK N GT+ IEGIFLD+ + K I     AF  M+ LRL K +   F  I K    
Sbjct: 518  HIYSVLKKNTGTETIEGIFLDMYRSKEIQFTTEAFAKMNRLRLLKVF--NFSGIGK---E 572

Query: 374  STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
              +E LS S        ++   +LRYL+W  YP  +LPS F  +NL+ELN+  S + + W
Sbjct: 573  GYKEPLSVS-------FEFPSYELRYLYWHGYPFGSLPSKFHSENLIELNMCYSYMRELW 625

Query: 434  EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
            +G +            L+ +     Q L   P           NFS   NL         
Sbjct: 626  KGNEV--------LDNLNTIELSNSQHLIHLP-----------NFSSMPNL--------- 657

Query: 494  VTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
              RL L G + I E+P SI  LT L +LDL  CKRLK + +S CKL+SL TLIL  C  L
Sbjct: 658  -ERLVLEGCTTISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACSKL 716

Query: 553  EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
            E FPEI+E MEHLK++  D T + +L  S E+L GL  L + DC  L  LP +IG+L+ L
Sbjct: 717  ESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSL 776

Query: 613  -YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR 671
               I++  S + QLP          +L S  C          L+ L A G L      VR
Sbjct: 777  ETLIVSGCSKLQQLP---------ENLGSLQC----------LVKLQADGTL------VR 811

Query: 672  EIPQEIAYLSSLEILYLSG------NNFESLPA---IIKQMSQLRFIHLEDFNMLQSLPE 722
            + P  I  L +LEIL   G      N++ SL +   + ++ S    + L   + L SL E
Sbjct: 812  QPPSSIVLLRNLEILSFGGCKGLASNSWSSLFSFWLLPRKSSDTIGLQLPSLSGLCSLRE 871

Query: 723  LPLCLKYLHLIDCKMLQSLPVLPFC----LESLDLTGCNMLRSLP----ELPLCLQYLNL 774
            L +        DC +++       C    LE+L+L+  N   SLP    +L   L++L+L
Sbjct: 872  LDIS-------DCNLMEGAVPFDICNLSSLETLNLSRNNFF-SLPAGISKLSK-LRFLSL 922

Query: 775  EDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPE 834
              C  L  +PELP  +  +  + C+ L ++         L  S    +  + P  +W   
Sbjct: 923  NHCKSLLQIPELPSSIIEVNAQYCSSLNTI---------LTPS---SVCNNQPVCRW--- 967

Query: 835  SLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELR--- 891
                  + F   NC  L+  A N    D       MAI S R+     + +KL       
Sbjct: 968  ------LVFTLPNCFNLD--AENPCSND-------MAIISPRMQIVTNMLQKLQNFLPDF 1012

Query: 892  GSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSD-CFRYF 950
            G  I LPGSEIPDW SNQ+ GS + I+LPPH    N +GFA C V   + +  + C    
Sbjct: 1013 GFSIFLPGSEIPDWISNQNLGSEVTIELPPHWFESNFLGFAVCCVFAFEDIAPNGCSSQL 1072

Query: 951  YVSFQFD-LEIKTLSETKH-VDLGYNSRYIEDLIDSDRVILGFKP--CLNVGF---PDGY 1003
                Q D    + +    H +D   NS   ED + S  + L +KP   L + +   P+ +
Sbjct: 1073 LCQLQSDESHFRGIGHILHSIDCEGNS---EDRLKSHHMWLAYKPRGRLRISYGDCPNRW 1129

Query: 1004 HHTIATFKFFAERKFYKIKRCGLCPVYANPSETKDNTFTINFATEVWKLDDLPSASGTL 1062
             H  A+F F +      +++CG+  +YA   E +++T   + ++      DL SA  ++
Sbjct: 1130 RHAKASFGFISCCPSNMVRKCGIHLIYAQDHEERNSTMIHHSSSG--NFSDLKSADSSV 1186


>gi|359493483|ref|XP_003634610.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1274

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 377/1107 (34%), Positives = 527/1107 (47%), Gaps = 184/1107 (16%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V++VGIWGM GIGKTT+AK I+++   +FEG CF+S+VR  S   G L +LQ ++LS  L
Sbjct: 211  VRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREESYKHG-LPYLQMELLSQIL 269

Query: 67   SEKLEVAG--PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
             E+   AG      +F K+ +   K+LI+LDDV++  QL+ L G+ + FG GSRI++TTR
Sbjct: 270  KERNPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRKQLEDLAGDNNWFGSGSRIIITTR 329

Query: 125  DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
            D+ +L     E   IY V  L+ +EA + FC +AF+  H  ED        + YT G PL
Sbjct: 330  DRHLLTC--QEVDAIYEVKELDNDEALKLFCLYAFRHKHGTEDFRQLCGHALDYTSGLPL 387

Query: 185  VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
             L+VLGSSL  K    W   L  L +    E+ ++   LK SF  L    ++IFLDIA F
Sbjct: 388  ALKVLGSSLYTKGIHEWKSELDKLKQFPNKEVQNV---LKTSFEGLDDNEQNIFLDIAFF 444

Query: 245  FEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
            ++G DKDFV  ILD         +  L DKSL++IS N L MHD+LQEMG +IVRQ+SE 
Sbjct: 445  YKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISENKLCMHDLLQEMGWEIVRQKSEV 504

Query: 302  EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF-- 359
             PG+RSRL   ++I+ VL  N GT+A+EGIFLDLS  K +N    AFT M  LRL K   
Sbjct: 505  -PGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSASKELNFSIDAFTKMKRLRLLKICN 563

Query: 360  --------YVPKFYEIEKLPSMSTEEQLSYS--KVQLPNGLDYLPKKLRYLHWDTYPLRT 409
                    Y+ K   I     +  E    Y+  K+ L     +L   LR L+W  YPL++
Sbjct: 564  VQIDRSLGYLSKKELIAYTHDVWIERNYLYTQNKLHLYEDSKFLSNNLRDLYWHGYPLKS 623

Query: 410  LPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLH 469
             PSNF P+ LVELN+  S+++QPWEG+K                   G + L+S      
Sbjct: 624  FPSNFHPEKLVELNMCFSRLKQPWEGKK-------------------GFEKLKS------ 658

Query: 470  FVCPVTINFSYCVNLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCK 526
                  I  S+  +L + P  SG   + RL L G +++ EV  SI  L  L  L+L GCK
Sbjct: 659  ------IKLSHSQHLTKIPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCK 712

Query: 527  RLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLP 586
            +LK  S+S   + SL  L L GC  L+ FPE+   MEHL  +  + T I  LP S ENL 
Sbjct: 713  KLKSFSSSI-HMESLQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLT 771

Query: 587  GL------------------------EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAI 622
            GL                        + L +  CS+L +LPDN+GSL+ L  + A  S +
Sbjct: 772  GLALLNLKECKSLESLPRSIFKLKSLKTLILSGCSELKDLPDNLGSLQCLTELNADGSGV 831

Query: 623  SQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSS 682
             ++P S+ L   L+ L  + CKG ES  R  +             ++    P E   L S
Sbjct: 832  QEVPPSITLLTNLQILSLAGCKGGESKSRNMI-------------FSFHSSPTEELRLPS 878

Query: 683  LEILYLSGNNFESLPAIIKQMSQLRFIHL-EDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
               LY       SL  +I Q   L    L  D   + SL  L L              S 
Sbjct: 879  FSGLY-------SLRVLILQRCNLSEGALPSDLGSIPSLERLDLSR-----------NSF 920

Query: 742  PVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRL 801
              +P       L+G + LRSL           LE C  L+SLPELP  ++ L   +C  L
Sbjct: 921  ITIP-----ASLSGLSRLRSL----------TLEYCKSLQSLPELPSSVESLNAHSCTSL 965

Query: 802  QSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILA 861
            ++             S     SK   DL+            F FTNC +L     + I+ 
Sbjct: 966  ETFT----------CSSSAYTSKKFGDLR------------FNFTNCFRLGENQGSDIVG 1003

Query: 862  DSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
              L  I+ M+     L  +  I    +E      ++PG+ IP+WF +QS G S+ I+LP 
Sbjct: 1004 AILEGIQLMSSIPKFLVPDRGIPTPHNEYNA---LVPGNRIPEWFRHQSVGCSVNIELPQ 1060

Query: 922  HSSCRNLIGFAFCAVLDSKKV-----DSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSR 976
            H     L+G AFCA L+ K        ++   +  V +  D  ++T         G +S 
Sbjct: 1061 HWYNTKLMGLAFCAALNFKGAMDGNPGTEPSSFGLVCYLNDCFVET---------GLHSL 1111

Query: 977  YI----EDLIDSDRVILGF------KPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGL 1026
            Y        I+SD  +  +      + CL   F     + +A+F         ++K+CG+
Sbjct: 1112 YTPPEGSKFIESDHTLFEYISLARLEICLGNWFRKLSDNVVASFALTGSDG--EVKKCGI 1169

Query: 1027 CPVYANPSETKDNTFTINFATEVWKLD 1053
              VY    + KD   +  F T  W  D
Sbjct: 1170 RLVYE--EDEKDGGCSFPFGT-TWPGD 1193


>gi|224145016|ref|XP_002325496.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862371|gb|EEE99877.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1254

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 359/1046 (34%), Positives = 519/1046 (49%), Gaps = 162/1046 (15%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V+ +GIWGMG IGKTT+A+A F   S ++EG  F+ ++R  SE  G L  L+ ++LS  L
Sbjct: 209  VRRIGIWGMGAIGKTTIAEAFFYSISSQYEGCHFLPNIRQESE-KGRLNDLRDELLSKLL 267

Query: 67   SEKL-EVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
             E+   V  P+IP F ++R+ + K+L+VLDDV +V Q + LI E+   G GS +VVT+RD
Sbjct: 268  EEENLRVGTPHIPTFIRDRLCQKKVLLVLDDVIDVRQFQHLI-EMPLIGPGSVLVVTSRD 326

Query: 126  KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
            ++VL+    E   IY V  L   EA + F   AFK NH P+     S + ++Y KGNPL 
Sbjct: 327  RQVLKNVVDE---IYEVEELNSHEALQLFSLNAFKGNHPPKAYMELSITAINYAKGNPLA 383

Query: 186  LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR-VKSIFLDIACF 244
            L+VLGS L  K +  W   L+++    E    +IYD+L+I F+ L     KSIFLD+ACF
Sbjct: 384  LQVLGSYLFDKGRQFWESQLNEIESFPEL---NIYDLLRIGFDALRDNNTKSIFLDVACF 440

Query: 245  FEGEDKDFVASILDDS--ESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
            F G   DFV  ILD    ++D    +LID+ L+ IS + + MHD+LQEM  ++VR+ES  
Sbjct: 441  FRGHRVDFVKRILDGCGFKTDTGFSVLIDRCLIKISDDKVEMHDLLQEMAHEVVRKESVD 500

Query: 302  EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
            E G++SRLW PK++ +VL +N GT  +EGIFLD+SK + I L   A   M  LRL K Y 
Sbjct: 501  ELGRQSRLWSPKDVYQVLTNNLGTGKVEGIFLDVSKTREIELSSTALERMYKLRLLKIY- 559

Query: 362  PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVE 421
                           E     +V LP+GL+ L ++LRYLHWD YPL +LP NF+P+NLVE
Sbjct: 560  -------------NSEAGVKCRVHLPHGLESLSEELRYLHWDGYPLTSLPCNFRPQNLVE 606

Query: 422  LNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC 481
            LNL  S V+Q W G+        QN   L  ++   C+ +   P          +N  +C
Sbjct: 607  LNLSSSNVKQLWRGD--------QNLVNLKDVNLSNCEHITLLPDLSKARNLERLNLQFC 658

Query: 482  VNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL----KRISTSFCK 537
             +L++FP                    SS++ L  L  LDLRGCKRL     R ++SF  
Sbjct: 659  TSLVKFP--------------------SSVQHLDKLVDLDLRGCKRLINLPSRFNSSF-- 696

Query: 538  LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS 597
               L TL L GC N++  PE   K+ +L     + T + ELP S   L GL  L +++C 
Sbjct: 697  ---LETLNLSGCSNIKKCPETARKLTYLNL---NETAVEELPQSIGELGGLVALNLKNCK 750

Query: 598  KLDNLPDNIGSLEYLY---------------------YILAAASAISQLPSSVALSNMLR 636
             L NLP+N+  L+ L                      Y+    +AI +LPSS+     L 
Sbjct: 751  LLVNLPENMYLLKSLLIADISGCSSISRFPDFSRNIRYLYLNGTAIEELPSSIGDLRELI 810

Query: 637  SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY-------------LSSL 683
             LD S C  +  FP+        +  L++   A+REIP  I                ++L
Sbjct: 811  YLDLSGCSSITEFPKVS----RNIRELYLDGTAIREIPSSIQLNVCVNFMNCTCETANNL 866

Query: 684  EILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL----IDCKMLQ 739
                 +      LP+ +  +  L  + + +   L+ +     CL  LHL    +D K L+
Sbjct: 867  RFFQAASTGITKLPSPVGNLKGLACLEVGNCKYLKGIE----CLVDLHLPERDMDLKYLR 922

Query: 740  SLPVLPFCLESL-DLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNC 798
             L +   C+  + D  GC  L SL  L L          N+ + +      LQ L +R+C
Sbjct: 923  KLNLDGCCISKVPDSLGC--LSSLEVLDLSGNNFETMPMNIYKLVE-----LQYLGLRSC 975

Query: 799  NRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNK 858
             +L+S+P +   L +LDA   + L K S     +   ++     F FTNCL+L     N+
Sbjct: 976  RKLKSIPRLPRRLSKLDAHDCQSLIKVS-----SSYVVEGNIFEFIFTNCLRL--PVINQ 1028

Query: 859  ILADSLLRIRHMAIASLRLGYEMAINEKLSELRG--SLIVLPGSEIPDWFSNQSSGSSIC 916
            IL  SLL+ +                E+L ++    S   LPG   P+WFS+QS GS++ 
Sbjct: 1029 ILLYSLLKFQ-------------LYTERLHQVPAGTSSFCLPGDVTPEWFSHQSWGSTVT 1075

Query: 917  IQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSE--TKHVD---- 970
              L  H +    +GF+  AV+         FR    SF   L++K       KH D    
Sbjct: 1076 FHLSSHWANSEFLGFSLGAVI--------AFR----SFGHSLQVKCTYHFRNKHGDSHDL 1123

Query: 971  -LGYNSRYIEDLIDSDRVILGFKPCL 995
                +  Y E  +DS+ + +GF PCL
Sbjct: 1124 YCYLHGWYDERRMDSEHIFIGFDPCL 1149


>gi|255537137|ref|XP_002509635.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223549534|gb|EEF51022.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1034

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 305/784 (38%), Positives = 429/784 (54%), Gaps = 74/784 (9%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+++GIWGMGGIGKTTLAKA+F   + +FEG CF+  VR   E   G  ++ K++LS   
Sbjct: 223 VRVLGIWGMGGIGKTTLAKAVFSDIACQFEGRCFLPSVRKFFEKDDGY-YIIKELLSQIS 281

Query: 67  SEK-LEVAGPNI--PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
            E  ++++  +I    F K  + R  +L+++DDVN   QL       + FG GSRI+VT+
Sbjct: 282 RESDVKISKTDILCSPFVKRMLNR-NVLVIIDDVNSPQQLDFFAENRNWFGTGSRIIVTS 340

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           RD+++L    G    IY +  L + EA + F   AFK+   PE L   S S + Y  G P
Sbjct: 341 RDRQIL---LGSADDIYEIKKLGYNEAQQLFSQNAFKKTFPPEGLIALSHSYIQYANGIP 397

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L L+VLGS+L  + +  W   L  L    ++   D+ +ILK+S++ L    K IFL +  
Sbjct: 398 LALKVLGSNLFGRTERKWKSTLEKLR---QAPNKDVLNILKVSYDGLDKEEKEIFLHVVS 454

Query: 244 FFEGEDK-DFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
           FF  + K D V  ILD    S   VL  L+DKSL++IS N + +HD+L  MG +IVRQES
Sbjct: 455 FFSRKKKIDEVTQILDGCGFSTEVVLCDLVDKSLITISDNTIAIHDLLHAMGMEIVRQES 514

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGI-NLDPRAFTNMSNLRLFK 358
             EPG+ SRLWD ++I RVL  N GT+AIE IFLD+SKI  I +L+P  F  MSNL+L +
Sbjct: 515 -TEPGEWSRLWDHEDILRVLTRNAGTEAIEAIFLDMSKIDEIIDLNPNVFARMSNLKLLR 573

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
           FY P F             +L   KV+L  GLD L  KL+YL+W+ YP +TLP+NF PK+
Sbjct: 574 FYDPNF----------DSRELKDIKVRLSRGLDSLSSKLQYLYWNGYPSKTLPANFHPKD 623

Query: 419 LVELNLRCSKVEQ----------------PWEGEKACVPSSIQNFKYLSALSFKGCQSLR 462
           LVEL+L  SK+++                 W      VP  +     L+ ++    + +R
Sbjct: 624 LVELHLPSSKLKRLPWKNMDLKKLKEIDLSWSSRLTTVPE-LSRATNLTCINLSDSKRIR 682

Query: 463 SFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDL 522
            FPS +      T+N S CV L  FP +S  +  LYL  +AIEEVPSS+ CL+ L  L+L
Sbjct: 683 RFPSTIGLDSLETLNLSDCVKLERFPDVSRSIRFLYLYGTAIEEVPSSVGCLSRLVSLNL 742

Query: 523 RGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
             C +LK + TS CK++SL  L L GC NL+HFPEI E M+ L  +Y D T I +LP S 
Sbjct: 743 FDCTKLKSLPTSICKIKSLELLCLSGCTNLKHFPEISETMDCLVELYLDGTAIADLPLSV 802

Query: 583 ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSH 642
           ENL  L  L + +C  L  LP++I  L++                       L SLD S 
Sbjct: 803 ENLKRLSSLSLSNCRNLVCLPESISKLKH-----------------------LSSLDFSD 839

Query: 643 CKGLESFPRTFLLGLSAMGL-LHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIK 701
           C  LE  P   ++ L  +    H+S  A      +++ LS L  L LS   FE+LP  IK
Sbjct: 840 CPKLEKLPEELIVSLELIARGCHLSKLA-----SDLSGLSCLSFLDLSKTKFETLPPSIK 894

Query: 702 QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ-SLPVLPFCLESLDLTGCNMLR 760
           Q+SQL  + +   + L+SLP+L L L+++  I  +    +L   PF    L   G ++++
Sbjct: 895 QLSQLITLDISFCDRLESLPDLSLSLQFIQAIYARAEHVALFYRPFYCNELAYNGFSVIK 954

Query: 761 SLPE 764
              E
Sbjct: 955 QYEE 958


>gi|147770134|emb|CAN76615.1| hypothetical protein VITISV_040107 [Vitis vinifera]
          Length = 1414

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 368/1111 (33%), Positives = 522/1111 (46%), Gaps = 214/1111 (19%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            SD V++VGIWGM GIGKTT+A+A++ +   +FE                           
Sbjct: 213  SDDVRMVGIWGMAGIGKTTIAEAVYQKICTQFE-----------------------VFWE 249

Query: 64   TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
              L+ ++   G N     K+ +  M++LIVLDDV+   QL+ L G  + FG GSRI++TT
Sbjct: 250  GNLNTRIFNRGINA---IKKXLHSMRVLIVLDDVDRPQQLEVLAGNHNWFGPGSRIIITT 306

Query: 124  RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
            R+K +L+    E+ +IY    L  +EA       AFK               ++YTKG P
Sbjct: 307  REKHLLD----EKVEIYEXKELNKDEARXLXYQHAFKYKPPAGXFVQLCDRALNYTKGIP 362

Query: 184  LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
            L L++LG  L  + K  W   L  L RI   EI D+   L+ISF+ L    K IF DIAC
Sbjct: 363  LALKILGRFLYNRSKKEWESELEKLRRIPNKEIQDV---LRISFDGLDDNQKDIFXDIAC 419

Query: 244  FFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
            FF+G+DKD+V  +L   +      +  LIDKSLV+IS N L MHD++QEMG +IVRQES 
Sbjct: 420  FFKGQDKDYVIKLLKSCDFFPEIGIRNLIDKSLVTISYNKLCMHDLIQEMGWEIVRQESX 479

Query: 301  KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
            K+PGK SRLW   ++  +L  N GT+A+EG+ L+LS +K ++     FT M+ LR+ +FY
Sbjct: 480  KDPGKXSRLWVNDDVIDMLTTNTGTEAVEGMVLNLSTLKELHFSVNVFTKMNKLRVXRFY 539

Query: 361  VPKFYEIEKLPSMSTEEQLSYS--KVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
              + +    +   +   +  Y+  K  L     +L   LR L+WD YPL++LPSNF P+ 
Sbjct: 540  DAQIWGSSWIWRRNDRYKSPYTECKFHLSGDFKFLSNHLRSLYWDGYPLKSLPSNFHPEK 599

Query: 419  LVELNLRCSKVEQPWEGEKA----------------------------------C----- 439
            L+EL +  S++EQ WEG K+                                  C     
Sbjct: 600  LLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHLIKXPDFSGAPKLRRIILEGCTSLVK 659

Query: 440  VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG---KVTR 496
            V  SI   K L  L+ +GC++L+SF S++H      +  S C  L + P++ G    ++ 
Sbjct: 660  VHPSIGALKKLIFLNLEGCKNLKSFLSSIHLESLQILTLSGCSKLKKXPEVQGAMDNLSE 719

Query: 497  LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
            L L  +AI+ +P SIE L  L + +L  CK L+ +     KL+SL TLIL  CL L+  P
Sbjct: 720  LSLKGTAIKGLPLSIEYLNGLALFNLEECKSLESLPGCXFKLKSLKTLILSNCLRLKKLP 779

Query: 557  EILEKMEHLKRIYSDRTPITELPSSFENLPGL------------------------EVLF 592
            EI E ME LK ++ D T + ELPSS E+L GL                        + L 
Sbjct: 780  EIQENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESICKLTSLQTLT 839

Query: 593  VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
            +  CS+L  LPD++GSL+ L  + A  S I ++PSS+ L   L+ L  + CKG  S  R 
Sbjct: 840  LSGCSELKKLPDDMGSLQCLLKLKANGSGIQEVPSSITLLTRLQVLSLAGCKGGGSKSRN 899

Query: 653  FLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE 712
              L L             R  P +   LSSL +L+                  L+ ++L 
Sbjct: 900  LALSL-------------RASPTDGLRLSSLTVLH-----------------SLKKLNLS 929

Query: 713  DFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLR---SLPELPLCL 769
            D N+L+    LP  L  L  ++C               LDL+  N +    SL  LP  L
Sbjct: 930  DRNLLEG--ALPSDLSSLSWLEC---------------LDLSRNNFITVPTSLSRLPH-L 971

Query: 770  QYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDL 829
            + L +E C  L+SLPELP  ++ L   +C  L++            A  L K    +   
Sbjct: 972  RRLIVEHCKNLQSLPELPSSIKELLANDCTSLETFS------YPSSAYPLRKFGDFN--- 1022

Query: 830  QWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINE---K 886
                         FEF+NC +L G   +  +   L  IR +A     +   MA +E   +
Sbjct: 1023 -------------FEFSNCFRLVGNEQSDTVEAILQEIRLVA----SIQKSMAPSEHSAR 1065

Query: 887  LSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDC 946
              E R   +V PGS IP+WF++QS G SI ++LPP     N IG A CAV   K      
Sbjct: 1066 YGESRYDAVV-PGSRIPEWFTHQSEGDSITVELPPGCYNTNSIGLAACAVFHPKFSMGKI 1124

Query: 947  FRYFYVSFQ----FDLEIKT---LSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGF 999
             R  Y S      F L+  T    S+  H+  GY            R+I G      V  
Sbjct: 1125 GRSAYFSVNESGGFSLDNTTSMHFSKADHIWFGY------------RLISG------VDL 1166

Query: 1000 PDGYHHTIATFKFFAERKFYKIKRCGLCPVY 1030
             D      AT K   E     +K+CG+  VY
Sbjct: 1167 RDHLKVAFATSKVPGE----VVKKCGVRLVY 1193


>gi|359493487|ref|XP_003634612.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1162

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 356/985 (36%), Positives = 487/985 (49%), Gaps = 162/985 (16%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            SD V++VGIWGM GIGKTT+AK I+++   +FEG CF+S+VR  S    GL +LQ ++LS
Sbjct: 214  SDDVRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREES-YKHGLPYLQMELLS 272

Query: 64   TTLSEKLEVAG--PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
              L E+   AG      +F K+ +   K+LI+LDDV++  QL+ L G  + FG GSRI++
Sbjct: 273  QILKERKPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRQQLEDLAGYNNWFGLGSRIII 332

Query: 122  TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
            TTRD+ +L     E   IY V  L+ +EA + FC +AF+  H  ED        + YT G
Sbjct: 333  TTRDRHLLTC--QEVDAIYEVKELDNDEALKLFCLYAFRHRHGTEDFRQLCGHALDYTSG 390

Query: 182  NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
             PL L+VLGSSL  K    W   L+ L +    E+ ++   LK SF  L    ++IFLDI
Sbjct: 391  LPLALKVLGSSLYTKGIHEWESELNKLKQFPNKEVQNV---LKTSFEGLDDNEQNIFLDI 447

Query: 242  ACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
            A F++G DKDFV  ILD         +  L DKSL++IS N L MHD+LQEMG +IVRQ+
Sbjct: 448  AFFYKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISENKLCMHDLLQEMGWEIVRQK 507

Query: 299  SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
            SE  PG+RSRL   ++I+ VL  N GT+A+EGIFLDLS+ K +N    AFT M  LRL K
Sbjct: 508  SEV-PGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSESKELNFSIDAFTKMKRLRLLK 566

Query: 359  F----------YVPKFYEIEKLPSMSTEEQLSYS--KVQLPNGLDYLPKKLRYLHWDTYP 406
                       Y+ K   I     + TE    Y+  K+ L     +L   LR L+W  YP
Sbjct: 567  ICNVQIDRSLGYLSKKELIAYTHDVWTERNYLYTQNKLHLYEDSKFLSNNLRDLYWHGYP 626

Query: 407  LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS 466
            L++ PSNF P+ LVELN+  S+++Q WEG+K                   G + L+S   
Sbjct: 627  LKSFPSNFHPEKLVELNMCFSRLKQLWEGKK-------------------GFEKLKS--- 664

Query: 467  NLHFVCPVTINFSYCVNLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLR 523
                     I  S+  +L + P  SG   + RL L G +++ EV  SI  L  L  L+L 
Sbjct: 665  ---------IKLSHSQHLTKTPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLE 715

Query: 524  GCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE 583
            GCK+LK  S+S   + SL  L L GC  L+ FPE+   MEHL  +  + T I  LP S E
Sbjct: 716  GCKKLKSFSSSI-HMESLQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIE 774

Query: 584  NLPGLEVLFVEDC------------------------SKLDNLPDNIGSLEYLYYILAAA 619
            NL GL +L +++C                        S+L  LPD++GSL+ L  + A  
Sbjct: 775  NLTGLALLNLKECKSLESLPRSIFKLKSLKTLTLCGCSELKELPDDLGSLQCLAELNADG 834

Query: 620  SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
            S I ++P S+ L   L+ L  + CKG +S  R  +             ++    P E   
Sbjct: 835  SGIQEVPPSITLLTNLQKLSLAGCKGGDSKSRNMV-------------FSFHSSPTEELR 881

Query: 680  LSSLEILYLSGNNFESLPAIIKQMSQLRFIHL-EDFNMLQSLPELPLCLKYLHLIDCKML 738
            L S   LY       SL  +I Q   L    L  D   + SL  L L             
Sbjct: 882  LPSFSGLY-------SLRVLILQRCNLSEGALPSDLGSIPSLERLDLSR----------- 923

Query: 739  QSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNC 798
             S   +P       L+G + LRSL           LE C  L+SLPELP  ++ L   +C
Sbjct: 924  NSFITIP-----ASLSGLSRLRSL----------TLEYCKSLQSLPELPSSVESLNAHSC 968

Query: 799  NRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNK 858
              L++             S     SK   DL+            F FTNC +L     + 
Sbjct: 969  TSLETF----------SCSSGAYTSKKFGDLR------------FNFTNCFRLGENQGSD 1006

Query: 859  ILADSLLRIRHMAIASLRL---GYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSI 915
            I+   L  I+ M+     L   G     NE  +       ++PGS IP+WF +QS G S+
Sbjct: 1007 IVGAILEGIQLMSSIPKFLVPWGIPTPHNEYNA-------LVPGSRIPEWFRHQSVGCSV 1059

Query: 916  CIQLPPHSSCRNLIGFAFCAVLDSK 940
             I+LPPH     L+G AFCA L+ K
Sbjct: 1060 NIELPPHWYNTKLMGLAFCAALNFK 1084


>gi|359493267|ref|XP_002271591.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1417

 Score =  451 bits (1160), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 378/1135 (33%), Positives = 539/1135 (47%), Gaps = 172/1135 (15%)

Query: 10   VGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML---STTL 66
            VGI+G+GGIGKTT+AK  F+  + +F  + F+++VR  S++ G L HLQKQ+L   S   
Sbjct: 344  VGIYGLGGIGKTTIAKVSFNHIASDFMITSFIANVRECSKSKG-LLHLQKQLLRDCSMRR 402

Query: 67   SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
             E L      I    K R+   K+L+VLDDV+ + QL+ L G+ + FG GS I++TTR+K
Sbjct: 403  VESLSNVDEGIT-MIKARLCFKKVLLVLDDVDNLSQLEALAGDHNWFGPGSIIIITTREK 461

Query: 127  RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVL 186
             +L     E   +Y    L  +EA E F   AF +NH  E     S SVV Y  G PL L
Sbjct: 462  HLLGH---EMDALYEAKKLGHKEAVELFSWHAFNQNHPKEYYETLSNSVVRYVDGLPLGL 518

Query: 187  EVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFE 246
            +VLG  LC K    W   LH L +    EI  +   LK S+++L    K +FLD+ACFF 
Sbjct: 519  KVLGRFLCGKTVGEWESELHKLKQEPNQEIQSV---LKRSYDELDHTQKQLFLDVACFFN 575

Query: 247  GEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEP 303
            GEDKDFV  ILD         + +L DK LV+I  N + MHD+LQ+MGR IVRQES ++P
Sbjct: 576  GEDKDFVTRILDACNFYAKGGIRVLTDKCLVTILDNKIWMHDLLQQMGRDIVRQESPEDP 635

Query: 304  GKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPK 363
            GK SRL  P  ISRVL    GT+AI+G+  ++S  K I++  ++F  M NLRL K Y   
Sbjct: 636  GKWSRLCYPGVISRVLTRKMGTEAIKGMLFNVSIPKQIHITTKSFAMMKNLRLLKIY--- 692

Query: 364  FYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELN 423
                  L S S  E  S   V+L    ++   +LRYL+W  YPL +LPS+F  ++LVEL+
Sbjct: 693  ----SHLKSTSAREDNS---VKLSKDFEFPSCELRYLYWQGYPLESLPSSFDAEDLVELD 745

Query: 424  LRCSKVEQPWEGE-----------------------------------KAC-----VPSS 443
            +R S ++Q WE +                                     C     V +S
Sbjct: 746  MRYSNLKQLWENDMLLEKLNTIRLSCSQHLIEIPDISISAPNLETLILDGCSSLLEVHTS 805

Query: 444  IQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL---YLG 500
            I     L  LS K C+ L SFPS ++      +N S C  L +FP I G +  L   YL 
Sbjct: 806  IGKLSKLILLSLKNCKKLSSFPSIINMEALKILNLSGCSGLKKFPDIQGNMEHLLELYLA 865

Query: 501  QSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILE 560
             +AIEE+P S   LT L +LDL+ CK LK +  S CKL SL  L L GC  LE+FPE++E
Sbjct: 866  STAIEELPLSFGHLTGLVILDLKRCKNLKSLPASICKLESLEYLFLSGCSKLENFPEMME 925

Query: 561  KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAAS 620
             ME+LK +  D T I  LP S + L GL +L + +C  L +LP  +  L  L  ++ +  
Sbjct: 926  DMENLKELLLDGTSIEGLPLSIDRLKGLVLLNLRNCKNLVSLPKGMCKLTSLETLIVSGC 985

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
            ++        L+N+ R+L S                L  +  LH    A+ + P  I  L
Sbjct: 986  SL--------LNNLPRNLGS----------------LQRLVQLHAEGTAITQPPDSIVLL 1021

Query: 681  SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ-SLPE-LPLCLKY--LHLIDCK 736
             +LE+L   G    + P  +  +     +H    N +   LP   P+   +  L L DCK
Sbjct: 1022 RNLEVLVYPGRKILT-PTSLGSLFSFWLLHRNSSNGIGLHLPSGFPIFRSFTNLDLSDCK 1080

Query: 737  MLQSLPVLPFC----LESLDLTGCNMLRSLPELPLCLQYL-NLED-----CNMLRSLPEL 786
            +++       C    L+ L L+  N L     +P  +  L NL+D     C  L  +PEL
Sbjct: 1081 LIEGAIPNDICSLISLKKLALSKNNFL----SIPAGISELTNLKDLLIGQCQSLIEIPEL 1136

Query: 787  PLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFT 846
            P  ++ +   NC  L      +  LQ L                            F F 
Sbjct: 1137 PPSIRDIDAHNCTALLPGSSSVSTLQGLQ---------------------------FLFY 1169

Query: 847  NCLKLNGKANNKILADSLLRIRH----MAIASLRLGYEMAINEKLSELRGSLIVLPGSEI 902
            NC KL    ++    + L R  H     + +   L     + +KL E     IV PGSEI
Sbjct: 1170 NCSKLFEDQSSDDKRNVLQRFPHNDASSSASVSSLTTSPVVMQKLLENIAFSIVFPGSEI 1229

Query: 903  PDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSK------KVDSDCFRYFYVSFQF 956
            P+W  +Q  GSSI I+LP      +L+GF+ C+VL+        +++SD F Y       
Sbjct: 1230 PEWIWHQHVGSSIKIELPT-DWYNDLLGFSLCSVLEHLPERIICRLNSDVFDY------G 1282

Query: 957  DLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVG---FPDGYHHTIATFKFF 1013
            DL+          D G++     + +  + V LG++PC  +    F D     +    F 
Sbjct: 1283 DLK----------DFGHDFHGKGNNVGPEHVWLGYQPCSQLRLFEFNDPNDWNLIEISFE 1332

Query: 1014 AERKFYK-----IKRCGLCPVYANPSETKDNTFTINFATEVWKLDDLPSASGTLD 1063
            A  +F       +K+CG+C +YA   E       I   +  + + +  S S  L+
Sbjct: 1333 AAHRFSSSASNVVKKCGVCLIYAEDLEGIHPQNKIQLKSRGYNVVERSSDSAGLN 1387


>gi|147769268|emb|CAN68108.1| hypothetical protein VITISV_013549 [Vitis vinifera]
          Length = 1236

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 354/997 (35%), Positives = 500/997 (50%), Gaps = 164/997 (16%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
             SD V+ VGIWGM GIGKTT+A+AI+D+   +F+G CF+ +                   
Sbjct: 212  GSDDVRFVGIWGMAGIGKTTIAEAIYDRIYTKFDGCCFLKN------------------- 252

Query: 63   STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
                               K R+R  ++LIVLDDV    QL+ L G  D FG GSRI++T
Sbjct: 253  ----------------DIYKARLRPKRVLIVLDDVVHRQQLEALAGNHDWFGSGSRIIIT 296

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            TR+KR+L     E  +IY+V  LE++EA + FC +AF+  H  ED        V YT G 
Sbjct: 297  TREKRLL--IEQEVDEIYKVEKLEYDEALKLFCQYAFRYKHPTEDFMQLCHHAVDYTGGL 354

Query: 183  PLVLEVLGSSLCLKRKS--HWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            PL L+VLGS  CL RKS   W   L  LN+    E+    ++LK SF+ L    K++FLD
Sbjct: 355  PLALKVLGS--CLYRKSIHEWKSELDKLNQFPNKEV---LNVLKTSFDGLDDNEKNMFLD 409

Query: 241  IACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
            IA F++GEDKDFV  +LD+    SE   +  L+DKSL++IS N L MHD+LQEMG +IVR
Sbjct: 410  IAFFYKGEDKDFVIEVLDNFFPVSE---IGNLVDKSLITISDNKLYMHDLLQEMGWEIVR 466

Query: 297  QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
            QES K+PGKRSRL   ++I  VL  NKGT+A+EG+  DLS  K +NL   AF  M+ LRL
Sbjct: 467  QESIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFDLSASKELNLSVDAFAKMNKLRL 526

Query: 357  FKFYVPKFYEIEKLPS-----MSTEEQLSY----------SKVQLPNGLDYLPKKLRYLH 401
             +FY  +FY   +  S      ST +   +          SK+ L     +    LR LH
Sbjct: 527  LRFYNCQFYGSSEYLSEEELIASTRDAWRWMGYDNSPYNDSKLHLSRDFKFPSNNLRSLH 586

Query: 402  WDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALS------- 454
            W  YPL++LPS F PK LVELN+  S ++Q WEG+KA          +   L+       
Sbjct: 587  WHGYPLKSLPSIFHPKKLVELNMCYSLLKQLWEGKKAFEKLKFIKLSHSQHLTKTPDFSA 646

Query: 455  --------FKGCQSL-RSFPSNLHFVCPVTINFSYCVNLIEFPQISG----KVTRLYLGQ 501
                      GC SL +  PS       + +N   C  L +FP++       ++ + L  
Sbjct: 647  APKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEG 706

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            +AI E+PSSI  L  L +L+LR CK+L  +  S C+L SL TL L GC  L+  P+ L +
Sbjct: 707  TAIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGR 766

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASA 621
            ++ L  ++ D T I E+PSS   L  L+ L +  C   ++   N+            A +
Sbjct: 767  LQCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWESKSWNL------------AFS 814

Query: 622  ISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE--IPQEIAY 679
                P+   L                  PR  L GL ++ +L++SD  + E  +P +++ 
Sbjct: 815  FGSWPTLEPL----------------RLPR--LSGLYSLKILNLSDCNLLEGALPIDLSS 856

Query: 680  LSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ 739
            LSSLE+L LS N+F ++PA +  +S+L  + L     LQSLPELP  ++YL+   C  L+
Sbjct: 857  LSSLEMLDLSRNSFITIPANLSGLSRLHVLMLPYCKSLQSLPELPSSIRYLNAEACTSLE 916

Query: 740  SLPVLPFCLES-----LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLT 794
            +    P    S     L L   N  R +      L  L L  C  L+SLPELP  ++ L 
Sbjct: 917  TFSCSPSACTSKRYGGLRLEFSNCFRLMENEHSRLHVLMLPYCKSLQSLPELPSSIRYLN 976

Query: 795  VRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGK 854
               C  L++      C               SP    A  S +   +  EF+NC +L   
Sbjct: 977  AEACTSLETFS----C---------------SPS---ACTSKRYGGLRLEFSNCFRLMEN 1014

Query: 855  ANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLI---------VLPGSEIPDW 905
             +N  +   LL I+ +A          +I + L    G  I         ++PGS IP+W
Sbjct: 1015 EHNDSVKHILLGIQLLA----------SIPKFLQPFLGGFIDGPHNLYDAIVPGSRIPEW 1064

Query: 906  FSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKV 942
            F +QS+GSS+ ++LPPH     L+G A CAV+ +  V
Sbjct: 1065 FVDQSTGSSVTVELPPHWYNTKLMGMAVCAVIGATGV 1101


>gi|255537139|ref|XP_002509636.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223549535|gb|EEF51023.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1137

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 284/747 (38%), Positives = 413/747 (55%), Gaps = 83/747 (11%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+ +GIWGMGGIGKTTLA+A+F Q +++FEGSCF+++VRGN E  GGL  LQ+++LS TL
Sbjct: 205 VRFLGIWGMGGIGKTTLAEAVFYQIAYQFEGSCFLANVRGNFEKNGGLARLQEELLSKTL 264

Query: 67  SEK-LEVAGPNIPH--FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
            ++  ++  PNI +  + K+ ++  ++LIV+DD N+  QL  L+G  D FG GSRI+VT+
Sbjct: 265 EKRDFKIDTPNIGYSFWVKQMLKHRRVLIVVDDANDSEQLDLLVGSHDWFGPGSRIIVTS 324

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           RDK+VL K   +   IY V  L   EA + F    FK+   PED ++ S  V+ Y KG P
Sbjct: 325 RDKQVLTKIVDD---IYEVKELVHHEALQLFNQTTFKKKCVPEDYSYLSDLVIEYAKGVP 381

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L L+VLGS L  K K+ W   L  L +       ++   LKIS++ L    K+IFLDIAC
Sbjct: 382 LALKVLGSFLFGKSKTEWESALDKLKKAPHRATQNV---LKISYDGLDAEEKNIFLDIAC 438

Query: 244 FFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
           FF GE  + V  ILD    S    L +L+DKSL++I  + + MHD+LQEMG++IV QES 
Sbjct: 439 FFRGESVEMVTKILDGCGFSTKIGLCLLVDKSLITILNDKVEMHDLLQEMGKEIVLQES- 497

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
           K+P +R+RLW+ ++I  V   N GT+ IEG+ L+ S I  I L+  AF  M NLR  KFY
Sbjct: 498 KQPSQRTRLWNHEDILHVFSRNLGTETIEGMCLNTSMINKIELNSNAFGRMYNLRFLKFY 557

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
               +   K            +K++LP GLD L  +LRYLHW  YPL++LP+     NLV
Sbjct: 558 QSYIHGGFK----------ECTKIRLPQGLDSLSNELRYLHWHGYPLKSLPARIHLMNLV 607

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
            L L  SKV++ W                      KGC+ L+             I+ SY
Sbjct: 608 VLVLPYSKVKRLW----------------------KGCKDLKKLK---------VIDLSY 636

Query: 481 CVNLIEFPQISGKVTRLYL---GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
              LI   +++      Y+   G   +  +PS+      L  L++  C +L+ + +S CK
Sbjct: 637 SQALIRITELTTASNLSYMKLSGCKNLRSMPSTTR-WKSLSTLEMNYCTKLESLPSSICK 695

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS 597
           L+SL +L L GC NL+ FPEILE M+ LK +  + T I ELPSS E L GL  +++E+C 
Sbjct: 696 LKSLESLSLCGCSNLQSFPEILESMDRLKVLVLNGTAIKELPSSIERLKGLSSIYLENCR 755

Query: 598 KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGL 657
            L +LP++  +L+ LY++                         + C  LE  P   L  L
Sbjct: 756 NLAHLPESFCNLKALYWLFL-----------------------TFCPKLEKLPEK-LSNL 791

Query: 658 SAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNML 717
           + +  L +    + ++P  + +LS +  L LSGN F+ LP+  K +  LR + +     L
Sbjct: 792 TTLEDLSVGVCNLLKLPSHMNHLSCISKLDLSGNYFDQLPS-FKYLLNLRCLDISSCRRL 850

Query: 718 QSLPELPLCLKYLHLIDCKMLQSLPVL 744
           +SLPE+P  L  +   DC+ L+++  L
Sbjct: 851 RSLPEVPHSLTDIDAHDCRSLETISGL 877



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 208/453 (45%), Gaps = 54/453 (11%)

Query: 613  YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAV 670
            Y  L+    +  +PS+    + L +L+ ++C  LES P +   L  L ++ L   S+  +
Sbjct: 654  YMKLSGCKNLRSMPSTTRWKS-LSTLEMNYCTKLESLPSSICKLKSLESLSLCGCSN--L 710

Query: 671  REIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLK-- 728
            +  P+ +  +  L++L L+G   + LP+ I+++  L  I+LE+   L  LPE    LK  
Sbjct: 711  QSFPEILESMDRLKVLVLNGTAIKELPSSIERLKGLSSIYLENCRNLAHLPESFCNLKAL 770

Query: 729  -YLHLIDCKMLQSLPVLP---FCLESLDLTGCNMLRSLPELPL--CLQYLNLEDCNMLRS 782
             +L L  C  L+ LP        LE L +  CN+L+    +    C+  L+L   N    
Sbjct: 771  YWLFLTFCPKLEKLPEKLSNLTTLEDLSVGVCNLLKLPSHMNHLSCISKLDLSG-NYFDQ 829

Query: 783  LPELPLCLQL--LTVRNCNRLQSLPEILLCLQELDAS---VLEKLS--KHSPDLQWAPES 835
            LP     L L  L + +C RL+SLPE+   L ++DA     LE +S  K    L++    
Sbjct: 830  LPSFKYLLNLRCLDISSCRRLRSLPEVPHSLTDIDAHDCRSLETISGLKQIFQLKYTHTF 889

Query: 836  LKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLI 895
                 I   FT+C K++  A +  LAD+   I+ +A   +R   E + +          I
Sbjct: 890  YDKKII---FTSCFKMDESAWSDFLADAQFWIQKVA---MRAKDEESFS----------I 933

Query: 896  VLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL---DSKKVDSDCFRYFYV 952
              PGS+IP WF  QS GSSI IQL P S   NL+GF  C VL   D  +  +  F    V
Sbjct: 934  WYPGSKIPKWFGYQSEGSSIVIQLHPRSHKHNLLGFTLCVVLAFEDEFEYHNSFFDVLCV 993

Query: 953  SFQFDLEIKTLSETKHVDLGYNSRY----IEDLIDSDRVILGFKPCLNVGFPDGYHHTIA 1008
             +Q        ++ K V   Y+SR         + SD VIL + P  +    +   +  A
Sbjct: 994  -YQLKNYRGEYTDCKEV---YSSRTHVSGKNKYVGSDHVILFYDPNFSSTEANELSYNEA 1049

Query: 1009 TFKFFAER------KFYKIKRCGLCPVYANPSE 1035
            +F+F+ +       +   +K+C   P+Y+   E
Sbjct: 1050 SFEFYWQNNESCCMQSSMVKKCAAIPLYSREEE 1082


>gi|359486071|ref|XP_002272667.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1261

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 367/1079 (34%), Positives = 546/1079 (50%), Gaps = 134/1079 (12%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG----GLEHLQ 58
             SD V++VGIWGM GIGKTT+A+A++ +    FEG CF+S+VR  S+        +E L 
Sbjct: 212  GSDDVRMVGIWGMAGIGKTTIAEAVYQKIRTRFEGCCFLSNVREKSQKNDPAVIQMELLS 271

Query: 59   KQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            +      L+  +   G N+    ++ +  M++LIVLDDV+   QL+ L G  + F  GSR
Sbjct: 272  QIFEEGNLNTGVLSGGINV---IEKTLHSMRVLIVLDDVDCPQQLEVLAGNHNWFSPGSR 328

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            I++TTR+K +L+    E+ +IY    L  +EA + F   AFK      D        ++Y
Sbjct: 329  IIITTREKHLLD----EKVEIYVAKELNKDEARKLFYQHAFKYKPPVGDFVQLCDRALNY 384

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
            TKG PL L++LG  L  + K  W   L  L RI   EI D+   L+ISF+ L    K IF
Sbjct: 385  TKGIPLALKILGRFLYNRSKKEWESELEKLRRIPNKEIQDV---LRISFDGLDDNQKDIF 441

Query: 239  LDIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
            LDIACFF+G+DKD+V  +L       E ++ + LIDKSLV+IS N L MHD++QEMG +I
Sbjct: 442  LDIACFFKGQDKDYVIKLLKSCDFFPEIEIRN-LIDKSLVTISYNKLCMHDLIQEMGWEI 500

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            VRQES K+PGKRSRLW   ++  +L  N GT+A+EG+ L+LS +K ++     FT M+ L
Sbjct: 501  VRQESIKDPGKRSRLWVNDDVIDMLTTNTGTEAVEGMVLNLSTLKELHFSVNVFTKMNKL 560

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYS--KVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            R+ +FY  + +    +   +   +  Y+  K  L     +L   LR LHWD YPL++LPS
Sbjct: 561  RVLRFYDAQIWGSSWIGRHNDRYKSPYTECKFHLSGDFKFLSNHLRSLHWDGYPLKSLPS 620

Query: 413  NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
            NF P+ L+EL +  S++EQ WEG K     S Q  K+                       
Sbjct: 621  NFHPEKLLELKMCFSQLEQLWEGNK-----SFQKLKF----------------------- 652

Query: 473  PVTINFSYCVNLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
               I  S+  +LI+ P  SG  K+ R+ L G +++ +V  SI  L  L  L+L GCK LK
Sbjct: 653  ---IELSHSQHLIKTPDFSGAPKLRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLK 709

Query: 530  RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
              S+S   L SL T+ L GC  L+ FPE+   M++L  +    T I  LP S E L GL 
Sbjct: 710  SFSSSI-HLESLQTITLSGCSKLKKFPEVQGAMDNLPELSLKGTAIKGLPLSIEYLNGLS 768

Query: 590  VLFVEDCSKLDNLPDNIGSLEYL-YYILAAASAISQLPSSVALSNM------------LR 636
            +L +E+C  L++LP  I  L+ L   IL+  S + +LP      NM            LR
Sbjct: 769  LLNLEECKSLESLPGCIFKLKSLKTLILSNCSRLKKLPE--IQENMESLKKLFLDDTGLR 826

Query: 637  SLDSS--HCKGL-----------ESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSS 682
             L SS  H  GL            S P + +  L+++  L +S  + ++++P ++  L  
Sbjct: 827  ELPSSIEHLNGLVLLKLKNCKKLASLPES-ICKLTSLQTLTLSGCSELKKLPDDMGSLQC 885

Query: 683  LEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE-LPLCLKYLHLIDCKMLQS- 740
            L  L  +G   + +P  I  +++L  + L      +S    L LCL+       K L+  
Sbjct: 886  LVKLKANGTGIQEVPTSITLLTKLEVLSLAGCKGGESKSRNLALCLRS---SPTKGLRPS 942

Query: 741  -LPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDC-----NMLRSLPELPLC--LQL 792
             LPVL + L  L+L+GCN+L     LP  L  L+  +C     N   ++P L     L+ 
Sbjct: 943  FLPVL-YSLRKLNLSGCNLLEG--ALPSDLSSLSWLECLDLSRNSFITVPNLSRLPRLKR 999

Query: 793  LTVRNCNRLQSLPEILLCLQEL---DASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCL 849
            L + +C  L+SLPE+   +++L   D + LE  S  S    W      S  + F+F NC 
Sbjct: 1000 LILEHCKSLRSLPELPSNIEKLLANDCTSLETFSNPSSAYAWR----NSRHLNFQFYNCF 1055

Query: 850  KL--NGKANNKILADSLLR-IRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWF 906
            +L  N +++N    +++LR IR +A  S  +           EL+    V+PGS IP+WF
Sbjct: 1056 RLVENEQSDN---VEAILRGIRLVASISNFVAPHY-------ELKWYDAVVPGSSIPEWF 1105

Query: 907  SNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSET 966
            ++QS G S+ ++LPPH     L+G A C V           R  Y S         ++E+
Sbjct: 1106 TDQSLGCSVTVELPPHWCTTRLMGLAVCFVFHPNIGMGKFGRSEYFS---------MNES 1156

Query: 967  KHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCG 1025
                L +N+        +D +  G++P     F     H   +F   + R    +K+CG
Sbjct: 1157 GGFSL-HNTASTH-FSKADHIWFGYRPLYGEVFSPSIDHLKVSFA-GSNRAGEVVKKCG 1212


>gi|224131070|ref|XP_002328446.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838161|gb|EEE76526.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1272

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 349/995 (35%), Positives = 511/995 (51%), Gaps = 100/995 (10%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S+ TV IVGIWGM GIGK+T A+A++ +   +FEG CF  +VR  S+  G ++ +++++L
Sbjct: 207  STGTVLIVGIWGMCGIGKSTTAEAVYHRNRSKFEGHCFFQNVREESQKHG-VDQVRQEIL 265

Query: 63   STTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
               L +  L++ G  +P   K  ++R K+LIV DDV++   LK L+GE   FGQGSRI+V
Sbjct: 266  GMVLGKNDLKICGKVLPSAIKRMLQRKKVLIVFDDVDDARDLKYLLGEDGLFGQGSRIIV 325

Query: 122  TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
            T+RD++VL     +E KIY+V  L  E+A   F   AFK+N+  E     S++VVS  +G
Sbjct: 326  TSRDRQVLIN-ACDEDKIYQVKILVKEDALRLFSLHAFKQNNPIEGYIGLSKTVVSCVQG 384

Query: 182  NPLVLEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
             PLVLEVLG+SL  K    +W   +  L R    E  DI   L++ +++L    K IFLD
Sbjct: 385  IPLVLEVLGASLYKKTSLEYWESKVAQL-RTTGGE--DIKKCLEMCYHELDQTEKKIFLD 441

Query: 241  IACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
            IACFF    +D +   LD  ES  +D L D  L+ I  + + MHD+L  +G++IV +E+ 
Sbjct: 442  IACFFGRCKRDLLQQTLDLEESSGIDRLADMCLIKIVQDKIWMHDVLLILGQEIVLREN- 500

Query: 301  KEPGKRSRLWDPKEISRVLKHNKGTDA-IEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
             +P +RSRLW  +++ RVL     T + +E I L L   K + L P AF  M NLRL K 
Sbjct: 501  VDPRERSRLWRAEDVCRVLTTQGTTGSKVESISLILDATKELRLSPTAFEGMYNLRLLKI 560

Query: 360  YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
            Y P F    K PS       +   + LP GL +L  +LR+L+W  YPL++LPSNF P+ L
Sbjct: 561  YYPPFL---KDPSKEKIMIRTRIGIHLPRGLHFLSSELRFLYWYNYPLKSLPSNFFPEKL 617

Query: 420  VELNLRCSKVEQPW-EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT-IN 477
            V+L + CS++EQ W EG         Q +   +    K C  L S P+++  +  +T +N
Sbjct: 618  VQLEMPCSQLEQLWNEG---------QTYHIRAFHHSKDCSGLASLPNSIGELKSLTKLN 668

Query: 478  FSYCVNLIEFPQISGKVT---RLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
               C  L   P   G++     LYL   S +  +P SI  L  L+ L L GC  L  +  
Sbjct: 669  LKGCSRLATLPDSIGELKSLDSLYLKDCSGLATLPDSIGELKSLDSLYLGGCSGLATLPE 728

Query: 534  SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY-SDRTPITELPSSFENLPGLEVLF 592
            S  +L+SL +L L GC  L   P+ + +++ L  +Y    + +  LP S   L  L+ L+
Sbjct: 729  SIGELKSLDSLYLRGCSGLASLPDSIGELKSLDSLYLGGCSGLATLPDSIGELKSLDSLY 788

Query: 593  VEDCSKLDNLPDNIG---SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            +  CS L  LPD+IG   SL+ LY  L   S ++ LP+S+     L SL    C GL S 
Sbjct: 789  LRGCSGLATLPDSIGELKSLDSLY--LGGCSGLASLPNSIGELKSLDSLYLRGCSGLASL 846

Query: 650  PRTFLLG--------LSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSG-NNFESLPAI 699
            P +  L         L ++  L++S    +  +P  I  L SL  LYL G +   +LP  
Sbjct: 847  PDSIGLASLPDSIGELKSLIWLYLSSCLGLESLPDSICELKSLSYLYLQGCSRLATLPNK 906

Query: 700  IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP--VLPFCLESLDLTGCN 757
            I ++  L  + LE  + L SLP             C  L SLP  ++      LD   C 
Sbjct: 907  IGELKSLDKLCLEGCSGLASLPNNI----------CSGLASLPNNIIYLEFRGLDKQCCY 956

Query: 758  ML---RSLPELPL------CLQYLNLEDCNMLR---------SLPELPL----------- 788
            ML   + + E+ L      C ++LNLE+  +L+         SL +L L           
Sbjct: 957  MLSGFQKVEEIALSTNKLGCHEFLNLENSRVLKTPESLGSLVSLTQLTLSKIDFERIPAS 1016

Query: 789  -----CLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICF 843
                  L  L + +C  LQ LPE+ L LQ L AS    L   +          K+A+  F
Sbjct: 1017 IKHLTSLHNLYLDDCKWLQCLPELPLTLQVLIASGCISLKSVASIFMQGDREYKAASQEF 1076

Query: 844  EFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIP 903
             F+ CL+L+  +  +I+  + LRI+ MA +   L Y     + L E+R   + +PGSE+P
Sbjct: 1077 NFSECLQLDQNSRTRIMGAARLRIQRMATSLFSLEYH---GKPLKEVR---LCIPGSEVP 1130

Query: 904  DWFSNQS-SGSSICIQLPPHSSCRNLIGFAFCAVL 937
            +WFS ++  GSS+ I  P         GF FCAV+
Sbjct: 1131 EWFSYKNREGSSVKIWQPAQWH----RGFTFCAVV 1161


>gi|356577113|ref|XP_003556672.1| PREDICTED: putative disease resistance protein At4g11170-like
            [Glycine max]
          Length = 1344

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 371/1154 (32%), Positives = 554/1154 (48%), Gaps = 180/1154 (15%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S  V+I+GIWGMGG+GKTT+A A+F + S ++EGSCF+++VR   E  G L +L+ ++ S
Sbjct: 238  SKEVRIIGIWGMGGVGKTTIANALFTKLSSQYEGSCFLANVREEYENQG-LGYLRNKLFS 296

Query: 64   TTLSE--KLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
              L +   L ++ P +   F   R+R+ K+LIVLDDV++  +L+ L  + D  G GS ++
Sbjct: 297  EVLEDDVNLHISTPKVRSTFVMRRLRQKKVLIVLDDVDDSKKLEYLAAQHDCLGSGSIVI 356

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            VTTRDK V+ K   E    Y V GL    A   F   AF + +  +     S+ VV +  
Sbjct: 357  VTTRDKHVISKGVDE---TYEVKGLSLHHAVRLFSLNAFGKTYPEKGFEMLSKQVVDHAN 413

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            GNPL L+VLGS L  + +  W   L  L ++  +EI ++   L+ S++ L    K++FLD
Sbjct: 414  GNPLALKVLGSLLHSRNEQQWANALRKLTKVPNAEIQNV---LRWSYDGLDYEQKNMFLD 470

Query: 241  IACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVR 296
            IACFF GE+ + V  +L+         + IL +KSLV+ S +  + MHD++QEMG +IV 
Sbjct: 471  IACFFRGENIENVIRLLEICGFYPYIGIKILQEKSLVTFSDDGKVCMHDLIQEMGWEIVH 530

Query: 297  QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
            +ES K+PG+RSRLWDPKE+  VLK+N+GTDA+EGI LD+S+I  + L    F+ M N+R 
Sbjct: 531  RESIKDPGRRSRLWDPKEVYDVLKNNRGTDAVEGIILDVSQISDLPLSYETFSRMINIRF 590

Query: 357  FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
             KFY+ +      L               LP+GL  LP KL YL WD YP ++LPS F  
Sbjct: 591  LKFYMGRGRTCNLL---------------LPSGLKSLPNKLMYLQWDGYPSKSLPSTFCT 635

Query: 417  KNLVELNLRCSKVEQPWEGEKA----------------------------------C--- 439
             NLV L++  S VE+ W+G K+                                  C   
Sbjct: 636  DNLVVLSMMESHVEKLWDGIKSFASLKEINLRASKKLTNLPDLSLAPNLETIDVSHCTSL 695

Query: 440  --VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL 497
              VP SIQ  K L   + + C++L+S P N+H           C +L EF   S  +T L
Sbjct: 696  LHVPLSIQYVKKLLLFNLESCKNLKSLPINIHLSSLEMFILRRCSSLDEFSVTSQNMTNL 755

Query: 498  YLGQSAIEEVPSSI-ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
             L ++AI++ P  + E L  L  L+L  C  LK + TS   L+SL  L L  C +LE F 
Sbjct: 756  DLRETAIKDFPEYLWEHLNKLVYLNLESCSMLKSL-TSKIHLKSLQKLSLRDCSSLEEFS 814

Query: 557  EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG--------- 607
               E M  L       T I ELP+S      L  L +  C KL N PD            
Sbjct: 815  VTSENMGCLNL---RGTSIKELPTSLWRNNKLFTLVLHSCKKLVNFPDRPKLEDLPLIFN 871

Query: 608  --------------SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP--- 650
                          +L  L  +    S+I  LP S+     L+ L  + CK L S P   
Sbjct: 872  GVSSSESPNTDEPWTLSSLADLSLKGSSIENLPVSIKDLPSLKKLTLTECKKLRSLPSLP 931

Query: 651  ----------------RTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFE 694
                               +  LS + +L +++Y     PQ++   SS +   L+ +  +
Sbjct: 932  PSLEDLSLDESDIECLSLSIKDLSHLKILTLTNYKKLMSPQDLP--SSSKASLLNESKVD 989

Query: 695  SLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL----IDCKMLQSLPVLPFCLES 750
            S    +K +S L+   L  +    SLPELP  L+ L L    I+C + +S+  L   L  
Sbjct: 990  SHLVSMKGLSHLQKFPLVKWKRFHSLPELPPFLEELSLSESNIEC-IPKSIKNLSH-LRK 1047

Query: 751  LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLP---ELPLCLQLLTVRNCNRLQSLPEI 807
            L +  C  LR LPELP  L+ L +  C+ + SLP   +  + L+ +T+  C +LQ LPE+
Sbjct: 1048 LAIKKCTGLRYLPELPPYLKDLFVRGCD-IESLPISIKDLVHLRKITLIECKKLQVLPEL 1106

Query: 808  LLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRI 867
              CLQ   A+    L     ++  + +++        + NC+ L+  + N I+AD+    
Sbjct: 1107 PPCLQSFCAADCRSL-----EIVRSSKTVLIEDRYAYYYNCISLDQNSRNNIIADAPFE- 1160

Query: 868  RHMAIASLRLGYEMAINEKLSELRGSL--IVLPGSEIPDWFSNQSSGSSICIQLPPHS-S 924
               A  SL+ G  +          G L  I LPG+EIPDWFS QS+ SS+ +++P     
Sbjct: 1161 --AAYTSLQQGTPL----------GPLISICLPGTEIPDWFSYQSTNSSLDMEIPQQWFK 1208

Query: 925  CRNLIGFAFCAVL--------DSKKVDSDCFRYFYVSFQFDLEIKTL---SETKHVDLGY 973
                +GFA C V+        +    D  C+ +   +F  D  +  L   +    V  G+
Sbjct: 1209 DSKFLGFALCLVIGGFLQNSYEGYDPDVKCYHFVKSAFNSDPSVPFLGHCTTVMQVPQGF 1268

Query: 974  NSRYIEDLIDSDRVILGFKPCLNVG----FPD-GYHHTIATFKFFAERKF---YK----I 1021
            N         SD + + + P  N      F D G ++   + +     KF   Y+    +
Sbjct: 1269 N---------SDHMFICYYPTFNASILQDFKDLGMYYDANSLRLRVIFKFKGPYQRLDIV 1319

Query: 1022 KRCGLCPVYANPSE 1035
            K+CG+ P+    +E
Sbjct: 1320 KKCGVRPLLIANTE 1333


>gi|359493269|ref|XP_003634556.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1299

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 370/1111 (33%), Positives = 537/1111 (48%), Gaps = 166/1111 (14%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S+ V++VGI+G GGIGKTT+AK +++Q S +F  + F+++VR +S++ G L   ++ +  
Sbjct: 218  SNDVRMVGIYGFGGIGKTTIAKVLYNQISAQFMIASFIANVREDSKSRGLLHLQKQLLQD 277

Query: 64   TTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
                 K  ++  +   H  K+R+   K+L+VLDDV+++ QL+ L G+ + FG GSRI+VT
Sbjct: 278  IFPRRKNFISNVDEGIHMIKDRLCFKKVLLVLDDVDDLNQLEALAGDHNWFGLGSRIIVT 337

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            TRDK +LE    E   +Y    L+ +EA E F   AFK+NH  ED    + SVV Y  G 
Sbjct: 338  TRDKHLLEVH--EMDALYEAKKLDHKEAVELFSWNAFKQNHPKEDYEIVTNSVVHYVNGL 395

Query: 183  PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
            PL L+VLGS L  K    W   LH L R    EI  +   L  S+++L    K IFLD+A
Sbjct: 396  PLGLKVLGSFLYGKTIQQWKSELHKLEREPNREIQCV---LMRSYDELDRTQKQIFLDVA 452

Query: 243  CFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
            CFF GEDKDFV  ILD     +ES  L +L DK L+SI  N + MHD+L+ MGR IV Q+
Sbjct: 453  CFFNGEDKDFVTRILDACNFFAESG-LRVLGDKCLISIIDNNIWMHDLLRHMGRGIVGQK 511

Query: 299  SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
              ++PGK SRL  P+ +SRVL    GT AI+GI  +LS  K I++   +   M NLRL K
Sbjct: 512  FPEDPGKWSRLCYPEVVSRVLTRKMGTKAIKGILFNLSIPKPIHITTESLEMMKNLRLLK 571

Query: 359  FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
             Y+          S ST E    +KV+L    ++   +LRYL+W  YPL +LPS+F  ++
Sbjct: 572  IYLDH-------ESFSTRED---NKVKLSKDFEFPSLELRYLYWQGYPLESLPSSFFVED 621

Query: 419  LVELNLRCSKVEQPWEGE-----------------------KACVPS------------- 442
            LVEL++R S + Q WE +                         C P+             
Sbjct: 622  LVELDMRYSSLTQLWENDMLLEKLNTIRLSCSQHLIEIPDISICAPNLEKLILDGCSSLL 681

Query: 443  ----SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL- 497
                SI     L  L+ K C+ L SFPS +       +NFS C  L +FP I G +  L 
Sbjct: 682  ILHPSIGKLSKLILLNLKNCKKLSSFPSIIDMKALEILNFSGCSGLKKFPDIRGNMDHLL 741

Query: 498  --YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
              +L  +AIEE+PSSI  +T L +LDL+ CK LK + TS C+L+SL  L L GC  LE+F
Sbjct: 742  ELHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLKSLEYLFLSGCSKLENF 801

Query: 556  PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
            PE++  ME+LK +  D T I  LPSS + L GL +L +  C  L +LP  +  L      
Sbjct: 802  PEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVSLPKGMCKL------ 855

Query: 616  LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
                               L +L  S C  L + PR  L  L  +  LH    A+ + P+
Sbjct: 856  -----------------TSLETLIVSGCSQLNNLPRN-LGSLQRLAQLHADGTAITQPPE 897

Query: 676  EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ-SLPELPLCLKY---LH 731
             I  L +L++L   G    + P  +  +     +H    N +   LP      +    L 
Sbjct: 898  SIVLLRNLQVLIYPGCKILA-PTSLGSLFSFWLMHRNSSNGVGLRLPSSFFSFRSFTNLD 956

Query: 732  LIDCKMLQSLPVLPFC----LESLDLTGCNMLRSLPELPLCLQYLNLED-----CNMLRS 782
            L D K+++       C    L+ LDL+  N L S+P      Q  NL+D     C  L  
Sbjct: 957  LSDLKLIEGAIPNDICSLISLKKLDLSRNNFL-SIP--AGISQLTNLKDLRLGHCQSLII 1013

Query: 783  LPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC 842
            +PELP  ++ +   NC  L      +  LQ L                            
Sbjct: 1014 IPELPPSIRDVDAHNCTALFPTSSSVCTLQGLQ--------------------------- 1046

Query: 843  FEFTNCLKLNGKANNKILADSLLRIRH----MAIASLRLGYEMAINEKLSELRGSLIVLP 898
            F F NC K     ++    ++L R  H     + +   +     + +KL E     IV P
Sbjct: 1047 FLFYNCSKPVEDQSSDQKRNALQRFPHNDASSSASVSSVTTSPVVRQKLLENIAFSIVFP 1106

Query: 899  GSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSK------KVDSDCFRYFYV 952
            GS IP+W  +Q+ GS I I+LP      + +GF  C++L+        +++SD F  +Y 
Sbjct: 1107 GSGIPEWIWHQNVGSFIKIELPTDWYNDDFLGFVLCSILEHLPERIICRLNSDVF--YYG 1164

Query: 953  SFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNV---GFPDGYHHTIAT 1009
             F+              D+G++  +  D++ S+ V LG++PC  +    F D        
Sbjct: 1165 DFK--------------DIGHDFHWKGDILGSEHVWLGYQPCSQLRLFQFNDPNDWNYIE 1210

Query: 1010 FKFFAERKFYK-----IKRCGLCPVYANPSE 1035
              F A  +F       +K+CG+C +YA   E
Sbjct: 1211 ISFEAAHRFNSSASNVVKKCGVCLIYAEDLE 1241


>gi|296089409|emb|CBI39228.3| unnamed protein product [Vitis vinifera]
          Length = 1161

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 364/1120 (32%), Positives = 541/1120 (48%), Gaps = 185/1120 (16%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVA----G 74
            KTT+AK +++  SH+FE   F+ +VR  S+    L  LQK++L+     K L+++    G
Sbjct: 47   KTTIAKVVYNNISHQFESRIFLENVRERSKDHSSLLQLQKELLNGVAKGKYLKISNIHEG 106

Query: 75   PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRG 134
             N+    + R    ++L++LDDV++  QL+ L+GE   FG  SRI++T+RD+ +LE++  
Sbjct: 107  VNV---IRNRFLSKRVLLILDDVDKSEQLQFLVGEHGWFGPRSRIIITSRDQHLLEEY-- 161

Query: 135  EEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLC 194
            E    Y V  L++EE+ + FC  AFK+N   +D    S  VV+Y  G PL LE+LGS L 
Sbjct: 162  EMDASYEVKVLDYEESMQLFCLHAFKQNILRKDYVDLSNDVVNYVNGLPLALEILGSFLF 221

Query: 195  LKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVA 254
             K K  W   L  L R       ++ ++LKISF+ L    K IFLD+ACFF+G ++  V 
Sbjct: 222  NKSKLEWESTLQKLKR---KPNMNVQNVLKISFDGLDEIEKEIFLDVACFFKGWNETDVT 278

Query: 255  SILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
             +LD + + V+ +L DK L+++S N + MHD++QEMGR+IVRQ   KEPGK SRLWDP++
Sbjct: 279  RLLDHA-NIVIRVLSDKCLITLSHNIIWMHDLVQEMGREIVRQNHPKEPGKWSRLWDPED 337

Query: 315  ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
            I  VL+   GT+AIEGIFLD+S+ + I+    AF  M  LRLFK Y    +    +  M 
Sbjct: 338  ICLVLRRKMGTEAIEGIFLDMSRSREISFTTEAFRRMERLRLFKVYWSHGF----VNYMG 393

Query: 375  TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
             E    Y K  LP   +     LRYLHW+ Y L++LPSNF  +NL+ELNL+ S +EQ W+
Sbjct: 394  KE----YQKFLLPEDFEIPSHDLRYLHWEGYSLKSLPSNFHGENLIELNLKHSNIEQLWQ 449

Query: 435  GEKAC---------------------------------------VPSSIQNFKYLSALSF 455
            G+K                                         V SSI   K L+ L+ 
Sbjct: 450  GKKYLEELKMLTLSESQLLNEIPHFSNMPNLEQLNIELCEKLDKVDSSIGILKKLTLLNL 509

Query: 456  KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT 515
            +GCQ + S PS + ++                      + RLYL   AI+E+PSSI  LT
Sbjct: 510  RGCQKISSLPSTIQYLV--------------------SLKRLYLHSIAIDELPSSIHHLT 549

Query: 516  DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
             L+ L +RGC+ L+ + +S C+L+SL  L L GC NL  FPEI+E ME L  +    T +
Sbjct: 550  QLQTLSIRGCENLRSLPSSICRLKSLEELDLYGCSNLGTFPEIMENMEWLTELNLSGTHV 609

Query: 576  TELPSSFE------------------------NLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
              LPSS E                         L  LE L +  CS L+  P+ +  +E 
Sbjct: 610  KGLPSSIEYLNHLTRLELRCCKNLRSLPSSIWRLKSLEELDLFGCSNLETFPEIMEDMEC 669

Query: 612  LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYA 669
            L  +  + + I +LP S+   N L  L    C+ L S P +   L  L  + L + S+  
Sbjct: 670  LMELNLSRTCIKELPPSIGYLNHLTFLGLQCCQNLRSLPSSICRLKSLEELDLYYCSNLE 729

Query: 670  VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY 729
            +   P+ +  +  L  L LSG + + LP+ I+ ++ L  + L +   L+SLP     LK+
Sbjct: 730  I--FPEIMENMECLIKLDLSGTHIKELPSSIEYLNHLTSMRLVESKNLRSLPSSICRLKF 787

Query: 730  ---LHLIDCKMLQSLPVL---PFCLESLDLTGCNMLRSLPELPLCLQYLN------LEDC 777
               L+L  C  L++ P +     CL+ LDL+G     S+ +LP  + YLN      L  C
Sbjct: 788  LEKLNLYGCSHLETFPEIMEDMECLKKLDLSGT----SIKKLPSSIGYLNHLTSFRLSYC 843

Query: 778  NMLRSLPELPLCLQLLTVRNC---------------NRLQSLPEIL--LC-LQELDASVL 819
              LRSLP     L+ LT  +                N +  +P ++  LC L+ LD S  
Sbjct: 844  TNLRSLPSSIGGLKSLTKLSLSGRPNRVTEQLFLSKNNIHHIPSVISQLCNLECLDISHC 903

Query: 820  EKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGY 879
             K+ +  PDL   P SL+      +   C    G       +  L          +   +
Sbjct: 904  -KMLEEIPDL---PSSLRE----IDAHGC---TGLGTLSSPSSLLWSSLLKWFKKVETPF 952

Query: 880  EMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCR---NLIGFAFCAV 936
            E              I L  + IP W  +Q  GS I I+LP   +C    + +GF F  +
Sbjct: 953  EWG-----------RINLGSNGIPRWVLHQEVGSQIRIELP--MNCYHDDHFLGFGFFCL 999

Query: 937  LDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDL--IDSDRVILGFKPC 994
             +   VD +      +S +FD   + L E  +   G +     D+   +SD V + + P 
Sbjct: 1000 YEP-VVDLN------LSLRFD---EDLDEKAYAYKGASWCECHDINSSESDEVWVVYCPK 1049

Query: 995  LNVG---FPDGYHHTIATFKFFAERKFYKIKRCGLCPVYA 1031
            + +G     + Y H  A+F          IK CG+  VY+
Sbjct: 1050 IAIGDKLQSNQYKHLHASFDACIIDCSKNIKSCGIHLVYS 1089


>gi|147862827|emb|CAN78931.1| hypothetical protein VITISV_024045 [Vitis vinifera]
          Length = 1454

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 304/889 (34%), Positives = 458/889 (51%), Gaps = 119/889 (13%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
            + V++VGI+G GGIGKTT+AK ++++   +F G+ F+ DV+  S+    LE LQKQ+L  
Sbjct: 211  NDVRVVGIYGTGGIGKTTIAKIVYNEIQCQFSGASFLQDVKERSKNGCQLE-LQKQLLRG 269

Query: 65   TLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
             L + +  +  N   +  + R+   K+LIV+DDV+ + QL+ L      FG GSRI++TT
Sbjct: 270  ILGKDIAFSDINEGINIIQGRLGSKKILIVIDDVDHLKQLESLAKSPKWFGPGSRIIITT 329

Query: 124  RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
            RD+ +L ++       YRV  L ++EA + F  +AFK+N   ED    S  +V Y +G P
Sbjct: 330  RDQHLLGEYGVNIP--YRVTELHYKEALQLFSRYAFKQNVPKEDYVDFSNCMVDYAQGLP 387

Query: 184  LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
            L L+VLGSSL       W   L   +R+ ++ + +I D+L+ISF+ L    K +FLDIAC
Sbjct: 388  LALKVLGSSLHGMTIDEWRSAL---DRLKKNPVKEINDVLRISFDGLDNLEKDVFLDIAC 444

Query: 244  FFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
            FF+ E KDFV+ ILD      +  + IL DK L++IS N + MHD++++MG  IVR E  
Sbjct: 445  FFKKECKDFVSRILDGCNLFATHGITILHDKCLITISDNIIQMHDLIRQMGWAIVRDEYP 504

Query: 301  KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
             +P K SRLWD  +I       +G + I+ I LD+S  K +      F  M+ LRL K Y
Sbjct: 505  GDPSKWSRLWDVDDIYDAFSRQEGMENIQTISLDMSTSKEMQFTTEVFAKMNKLRLLKVY 564

Query: 361  VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                        ++ EE     KV LP  +++ P KLRYLHW    LR+LPS F  +NLV
Sbjct: 565  CNDH------DGLTREEY----KVFLPKDIEF-PHKLRYLHWQGCTLRSLPSKFYGENLV 613

Query: 421  ELNLRCSKVEQPWEGEK----------------------ACVPS---------------- 442
            E+NL+ S ++Q W+G+K                      + +P+                
Sbjct: 614  EINLKSSNIKQLWKGDKFLGKLKVIDLSDSKQLVKMPKFSSMPNLERLNLEGCISLRELH 673

Query: 443  -SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV---TRLY 498
             SI + K L+ L+  GC+ L+SFP  + F     +    C NL +FP+I G +     LY
Sbjct: 674  LSIGDLKRLTYLNLGGCEQLQSFPPGMKFESLEVLYLDRCQNLKKFPKIHGNMGHLKELY 733

Query: 499  LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
            L +S I+E+PSSI  L  LEVL+L  C  L++       ++ L  L L GC   E F + 
Sbjct: 734  LNKSEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGNMKFLRELHLEGCSKFEKFSDT 793

Query: 559  LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
               MEHL+ ++   + I ELPSS   L  LE+L +  CSK +  P+  G+++ L  +   
Sbjct: 794  FTYMEHLRGLHLGESGIKELPSSIGYLESLEILDLSYCSKFEKFPEIKGNMKCLKELYLD 853

Query: 619  ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGL---LHISDYAVREIPQ 675
             +AI +LP+S+     L  L    C   E F   F    + MGL   L++ +  ++E+P 
Sbjct: 854  NTAIKELPNSMGSLTSLEILSLKECLKFEKFSDIF----TNMGLLRELYLRESGIKELPN 909

Query: 676  EIAYLSSLEILYLS-GNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID 734
             I YL SLEIL LS  +NF+  P I   +  L+ + LE+   ++ LP    CL+      
Sbjct: 910  SIGYLESLEILNLSYCSNFQKFPEIQGNLKCLKELCLEN-TAIKELPNGIGCLQ------ 962

Query: 735  CKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC------------------------LQ 770
                         LESL L+GC+     PE+ +                         L+
Sbjct: 963  ------------ALESLALSGCSNFERFPEIQMGKLWALFLDETPIKELPCSIGHLTRLK 1010

Query: 771  YLNLEDCNMLRSLPELPLC----LQLLTVRNCNRLQSLPEILLCLQELD 815
            +L+LE+C  LRSLP   +C    L+ L++  C+ L++  EI   ++ L+
Sbjct: 1011 WLDLENCRNLRSLPN-SICGLKSLERLSLNGCSNLEAFSEITEDMERLE 1058



 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 190/413 (46%), Gaps = 54/413 (13%)

Query: 331  IFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGL 390
            ++LD + IK +   P +  ++++L +    + +  + EK   + T   L        +G+
Sbjct: 850  LYLDNTAIKEL---PNSMGSLTSLEILS--LKECLKFEKFSDIFTNMGLLRELYLRESGI 904

Query: 391  DYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYL 450
              LP  + YL        +  SNF+    ++ NL+C K           +P+ I   + L
Sbjct: 905  KELPNSIGYLESLEILNLSYCSNFQKFPEIQGNLKCLKELCLENTAIKELPNGIGCLQAL 964

Query: 451  SALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS-GKVTRLYLGQSAIEEVPS 509
             +L+  GC                        N   FP+I  GK+  L+L ++ I+E+P 
Sbjct: 965  ESLALSGCS-----------------------NFERFPEIQMGKLWALFLDETPIKELPC 1001

Query: 510  SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY 569
            SI  LT L+ LDL  C+ L+ +  S C L+SL  L L GC NLE F EI E ME L+ ++
Sbjct: 1002 SIGHLTRLKWLDLENCRNLRSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLEHLF 1061

Query: 570  SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSS 628
               T ITELPS   +L GLE L + +C  L  LP++IGSL  L  + +   + +  LP +
Sbjct: 1062 LRETGITELPSLIGHLRGLESLELINCENLVALPNSIGSLTCLTTLRVRNCTKLRNLPDN 1121

Query: 629  V-ALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
            + +L   L  LD   C  +E                        EIP ++  LS L  L 
Sbjct: 1122 LRSLQCCLLWLDLGGCNLMEG-----------------------EIPSDLWCLSLLVSLD 1158

Query: 688  LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
            +S N+   +PA I Q+S+L+ + +    ML+ + E+P  L  +    C  L++
Sbjct: 1159 VSENHIRCIPAGITQLSKLKALFMNHCPMLEEIGEVPSSLTVMEAHGCPSLET 1211


>gi|147834354|emb|CAN69843.1| hypothetical protein VITISV_019700 [Vitis vinifera]
          Length = 1284

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 302/847 (35%), Positives = 441/847 (52%), Gaps = 125/847 (14%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVA----G 74
            KTT+AK +++  SH+FE   F+ +VR  S+    L  LQK++L+     K L+++    G
Sbjct: 237  KTTIAKVVYNNISHQFESRIFLENVRERSKDHSSLLQLQKELLNGVAKGKYLKISNIHEG 296

Query: 75   PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRG 134
             N+    + R    ++L++LDDV++  QL+ L+GE   FG  SRI++T+RD+ +LE++  
Sbjct: 297  VNV---IRNRFLSKRVLLILDDVDKSEQLQFLVGEHGWFGPRSRIIITSRDQHLLEEY-- 351

Query: 135  EEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLC 194
            E    Y V  L++EE+ + FC  AFK+N   +D    S  VV+Y  G PL LE+LGS L 
Sbjct: 352  EMDASYEVKVLDYEESMQLFCLHAFKQNILRKDYVDLSNDVVNYVNGLPLALEILGSFLF 411

Query: 195  LKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVA 254
             K K  W   L  L R       ++ ++LKISF+ L    K IFLD+ACFF+G ++  V 
Sbjct: 412  NKSKLEWESTLQKLKR---KPNMNVQNVLKISFDGLDEIEKEIFLDVACFFKGWNETDVT 468

Query: 255  SILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
             +LD + + V+ +L DK L+++S N + MHD++QEMGR+IVRQ   KEPGK SRLWDP++
Sbjct: 469  RLLDHA-NIVIRVLSDKCLITLSHNIIWMHDLVQEMGREIVRQNHPKEPGKWSRLWDPED 527

Query: 315  ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
            I  VL+   GT+AIEGIFLD+S+ + I+    AF  M  LRLFK Y    +    +  M 
Sbjct: 528  ICLVLRRKMGTEAIEGIFLDMSRSREISFTTEAFRRMERLRLFKVYWSHGF----VNYMG 583

Query: 375  TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
             E    Y K  LP   +     LRYLHW+ Y L++LPSNF  +NL+ELNL+ S +EQ W+
Sbjct: 584  KE----YQKFLLPEDFEIPSHDLRYLHWEGYSLKSLPSNFHGENLIELNLKHSNIEQLWQ 639

Query: 435  GEKAC---------------------------------------VPSSIQNFKYLSALSF 455
            G+K                                         V SSI   K L+ L+ 
Sbjct: 640  GKKYLEELKMLTLSESQLLNEIPHFSNMPNLEQLNIELCEKLDKVDSSIGILKKLTLLNL 699

Query: 456  KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT 515
            +GCQ + S PS + ++                      + RLYL   AI+E+PSSI  LT
Sbjct: 700  RGCQKISSLPSTIQYLVS--------------------LKRLYLHSIAIDELPSSIHHLT 739

Query: 516  DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
             L+ L +RGC+ L+ + +S C+L+SL  L L GC NL  FPEI+E ME L  +    T +
Sbjct: 740  QLQTLSIRGCENLRSLPSSICRLKSLEELDLYGCSNLXTFPEIMENMEWLTELNLSGTHV 799

Query: 576  TELPSSFE------------------------NLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
              LPSS E                         L  LE L +  CS L+  P+ +  +E 
Sbjct: 800  KGLPSSIEYLNHLTRLELRCCKNLRSLPSSIWRLKSLEELDLFGCSNLETFPEIMEDMEC 859

Query: 612  LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYA 669
            L  +  + + I +LP S+   N L  L    C+ L S P +   L  L  + L + S+  
Sbjct: 860  LMELNLSRTCIKELPPSIGYLNHLTFLGLQCCQNLRSLPSSICRLKSLEELDLYYCSNLE 919

Query: 670  VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY 729
            +   P+ +  +  L  L LSG + + LP+ I+ ++ L  + L +   L+SLP     LK+
Sbjct: 920  I--FPEIMENMECLIKLDLSGTHIKELPSSIEYLNHLTSMRLVEXKNLRSLPSSICRLKF 977

Query: 730  ---LHLIDCKMLQSLPVL---PFCLESLDLTGCNMLRSLPELPLCLQYLN------LEDC 777
               L+L  C  L++ P +     CL+ LDL+G     S+ +LP  + YLN      L  C
Sbjct: 978  LEKLNLYGCSHLETFPEIMEDMECLKKLDLSGT----SIKKLPSSIGYLNHLTSFRLSYC 1033

Query: 778  NMLRSLP 784
              LRSLP
Sbjct: 1034 TNLRSLP 1040


>gi|147789504|emb|CAN71924.1| hypothetical protein VITISV_006193 [Vitis vinifera]
          Length = 1297

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 372/1133 (32%), Positives = 540/1133 (47%), Gaps = 230/1133 (20%)

Query: 1    MDS-SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHL-- 57
            MDS S+ V++VGI+G+GGIGKTT+AK ++++ S +F  + F+++ + +S++ G L     
Sbjct: 234  MDSISNDVRMVGIYGLGGIGKTTIAKVLYNRISAQFMITTFIANAKEDSKSQGLLHLQKQ 293

Query: 58   -------QKQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGEL 110
                   +++   +T+ E +        H  K+R+   K+L+VLDDV+++ QL+ L G+ 
Sbjct: 294  LLHDILPRRKNFISTVDEGI--------HMIKDRLCFKKVLLVLDDVDDLNQLEALAGDH 345

Query: 111  DQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNW 170
            + FG GSRI+VTTRDK +LE    E   +Y    L  +E  E FC  AFK+NH  E+   
Sbjct: 346  NWFGPGSRIIVTTRDKHLLEVH--EVDTLYEAKKLYHKEVVELFCWNAFKQNHPKEEYET 403

Query: 171  HSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
             S  VV Y  G PL L+VLG  L  K    W   LH L      EI  +   LK S+++L
Sbjct: 404  VSNFVVHYVNGLPLGLKVLGCFLYGKTIRQWESELHKLEWEPNQEIQCV---LKRSYDEL 460

Query: 231  TPRVKSIFLDIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDI 286
                + IFLD+ACFF GEDKD V  IL+     +ES  + +L DK L+SI  N + MHD+
Sbjct: 461  DC-TQHIFLDVACFFNGEDKDSVTRILEACKFYAESG-MRVLGDKCLISIVDNKIWMHDL 518

Query: 287  LQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR 346
            LQ+MG+ IV QE  +EPGK SRLW P  +SRVL    GT+AI+GI L+LS  K I++   
Sbjct: 519  LQQMGQHIVGQEFPEEPGKWSRLWFPDVVSRVLTRKMGTEAIKGILLNLSIPKPIHVTTE 578

Query: 347  AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
            +F  M NL L K Y    YE   +          +SKV+L    ++   +LRYL+W  YP
Sbjct: 579  SFAMMKNLSLLKIYSD--YEFASMRE--------HSKVKLSKDFEFSSYELRYLYWQGYP 628

Query: 407  LRTLPSNFKPKNLVELNLRCSKVEQPWEGE------------------------------ 436
            L +LPS+F  ++LVEL++  S ++Q WE +                              
Sbjct: 629  LESLPSSFYAEDLVELDMCYSSLKQLWESDMLLEKLNTIRLSCCQHLIEIPDISVSAPNL 688

Query: 437  -----KAC-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIE 486
                   C     V  SI     L  L+ K C+ LRSF S ++      +N S C  L +
Sbjct: 689  EKLTLDGCSSLVKVHPSIGKLSKLILLNLKNCKKLRSFLSIINMEALEILNLSDCSELKK 748

Query: 487  FPQISGKVTRL---YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVT 543
            FP I G +  L   YL  +AIEE+PSS+E LT L +LDL+ CK LK + TS CKL SL  
Sbjct: 749  FPDIQGNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLESLEY 808

Query: 544  LILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE-------------------- 583
            L   GC  LE+FPE++E ME+LK +  D T I  LPSS +                    
Sbjct: 809  LFPSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLP 868

Query: 584  ----NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
                 L  LE L V  CS+L+NLP N+GSL++L    A  +AI+Q P S+ L   L+ L 
Sbjct: 869  KGMCTLTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLI 928

Query: 640  SSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL--P 697
               CK                          R  P  +  L S  +L+ +G+N  SL  P
Sbjct: 929  YPGCK--------------------------RLAPTSLGSLFSFWLLHRNGSNGISLRLP 962

Query: 698  AIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC----LESLDL 753
            +               F+   S   L L        DCK+++       C    L+ LDL
Sbjct: 963  S--------------GFSCFMSFTNLDLS-------DCKLIEGAIPNSICSLISLKKLDL 1001

Query: 754  TGCNMLRS---LPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
            +  + L +   + EL   L+ L L     L  +P+LP  ++ +   NC  L  LP     
Sbjct: 1002 SRNDFLSTPAGISELT-SLKDLRLGQYQSLTEIPKLPPSVRDIHPHNCTAL--LP----- 1053

Query: 811  LQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKA--NNKILADSLLRIR 868
                                  P SL+        TN + + G    +  I+  S   + 
Sbjct: 1054 ---------------------GPSSLR--------TNPVVIRGMKYKDFHIIVSSTASVS 1084

Query: 869  HMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNL 928
             +  + + +       +KL E     IV PGS IP+W  +QS GSSI I+LP      + 
Sbjct: 1085 SLTTSPVLM-------QKLFENIAFSIVFPGSGIPEWIWHQSVGSSIKIELPTDWYNDDF 1137

Query: 929  IGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVI 988
            +GFA C+VL+       C     V +  DL+          D G++  +  + + S+ V 
Sbjct: 1138 LGFALCSVLEQLPERIICHLNSDVFYYGDLK----------DFGHDFHWKGNHVGSEHVW 1187

Query: 989  LGFKPCLNVGF-----PDGYHHTIATFKFFAERKFYK-----IKRCGLCPVYA 1031
            LG +PC  +       P+ ++H   +F+  A  +F       +K+CG+C +Y 
Sbjct: 1188 LGHQPCSQLRLFQFNDPNDWNHIEISFE--AAHRFNSSASNVVKKCGVCLIYT 1238


>gi|224127754|ref|XP_002329169.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870950|gb|EEF08081.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1125

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 348/1047 (33%), Positives = 510/1047 (48%), Gaps = 171/1047 (16%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            M+S D V+IVGIWGMGGIGKTT+AKA++D  S +FEG  FV++VR   +    +  LQK 
Sbjct: 207  MESQD-VRIVGIWGMGGIGKTTIAKAVYDNVSAQFEGFLFVANVREEIKRHS-VVGLQKN 264

Query: 61   MLSTTLSEKLEVAGPNI--PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELD-QFGQGS 117
            +L   L + +   GP      F  +R+ R K+LIVLDDV+   QL+ L+ E    FG GS
Sbjct: 265  ILPELLDQDILNTGPLSFGNAFVMDRLLRKKVLIVLDDVDSSRQLEELLPEPHVSFGPGS 324

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            +I++T+RDK+VL     E   IY V  L   EA + F   AFK  +   D +     +V 
Sbjct: 325  KILLTSRDKQVLTNVVDE---IYDVERLNHHEALQLFNMKAFKNYNPTIDHSELVEKIVD 381

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
            Y +GNPL L VLGS+L  + K  W  VL+ L ++   EI ++   L+IS++ L    + I
Sbjct: 382  YAQGNPLALIVLGSALYGRSKEEWCSVLNKLGKVSSREIQNV---LRISYDGLDDEQQEI 438

Query: 238  FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQI 294
            FLD+A FF G ++D V  ILD   S     + +L +KSL++  G  +NMHD L+EM   I
Sbjct: 439  FLDLAFFFNGANRDRVTKILDGCYSAACLDISVLFEKSLITTPGCTVNMHDSLREMAFSI 498

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            VR+ES K PGKRSRL DP+++ + L   KGT+A+EGI LD+S+ + ++L   AF+ M  L
Sbjct: 499  VREES-KIPGKRSRLCDPEDVYQALVKKKGTEAVEGICLDISESREMHLKSDAFSRMDRL 557

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPN-GLDYLPKKLRYLHWDTYPLRTLPSN 413
            R+ KF+    + ++++  M  ++     KV LP+ GLDYL  +LRYLHWD +PL+TLP +
Sbjct: 558  RILKFF--NHFSLDEIFIMDNKD-----KVHLPHSGLDYLSDELRYLHWDGFPLKTLPQS 610

Query: 414  FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
            F  +N+VEL    SK+E+ W G        +Q+  +L  +   G   L   P        
Sbjct: 611  FCAENIVELIFPDSKIEKLWTG--------VQDLVHLRRMDLSGSPYLLEIPDLSMAENI 662

Query: 474  VTINFSYCVNLIEFPQISGKVTRLYLGQ----SAIEEVPSSIECLTDLEVLDLRGCKRLK 529
             +IN  +C +LIE       +T+L + Q      +  +PS I     L +LDL  C  ++
Sbjct: 663  ESINLKFCKSLIEVNPSIQYLTKLEVLQLSYCDNLRSLPSRIGSKV-LRILDLYHCINVR 721

Query: 530  RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
                       L  + L  C N+  FPEI     ++K +Y   T I E+PSS E L  L 
Sbjct: 722  ICPAISGNSPVLRKVDLQFCANITKFPEI---SGNIKYLYLQGTAIEEVPSSIEFLTALV 778

Query: 590  VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
             L++ +C +L                       S +PSS+     L  L  S C  LE+F
Sbjct: 779  RLYMTNCKQL-----------------------SSIPSSICKLKSLEVLGLSGCSKLENF 815

Query: 650  PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
            P   +  + ++  L +   A++E+P  I YL  L  L L     E L + I Q+  L  +
Sbjct: 816  PE-IMEPMESLRRLELDATAIKELPSSIKYLKFLTQLKLGVTAIEELSSSIAQLKSLTHL 874

Query: 710  HLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCL 769
             L       ++ ELP  +++L                CL+ LDL+G              
Sbjct: 875  DLGG----TAIKELPSSIEHLK---------------CLKHLDLSGTG------------ 903

Query: 770  QYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEI-LLCLQELDASVLEKLSKHSPD 828
                      ++ LPELP  L  L V +C  LQ+L    L   QEL+             
Sbjct: 904  ----------IKELPELPSSLTALDVNDCKSLQTLSRFNLRNFQELN------------- 940

Query: 829  LQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLS 888
                            F NC KL+ K   K++AD   +I+                    
Sbjct: 941  ----------------FANCFKLDQK---KLMADVQCKIQS------------------G 963

Query: 889  ELRGSL--IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDS-KKVDSD 945
            E++G +  IVLP SEIP WF  Q+ GSS+  +LP +  C  + G AFC V  S   + SD
Sbjct: 964  EIKGEIFQIVLPKSEIPPWFRGQNMGSSVTKKLPLN--CHQIKGIAFCIVFASPTPLLSD 1021

Query: 946  CFRYFYVSFQFDLEIKTLSETKHVDLGYNS------RYIEDLIDSDRVILGFKPCLNVGF 999
            C  +   S + D +     E  HV+L +          +  L DSD ++L ++     G 
Sbjct: 1022 CANF---SCKCDAKSDN-GEHDHVNLLWYDLDPQPKAAVFKLDDSDHMLLWYEST-RTGL 1076

Query: 1000 PDGYHHTIATFKFFAERKFYKIKRCGL 1026
               Y  +  TF+F+ + +  KIKRCG+
Sbjct: 1077 TSEYSGSEVTFEFYDKIEHSKIKRCGV 1103


>gi|359493208|ref|XP_002269054.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1695

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 280/742 (37%), Positives = 415/742 (55%), Gaps = 81/742 (10%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS+D V  VGI G+GGIGKTT+AKA++++ S++F+G+ F+++VR NSE    +  LQ+Q
Sbjct: 206 IDSND-VCFVGICGLGGIGKTTIAKALYNKISNQFQGASFLANVRENSEKHSDILQLQRQ 264

Query: 61  MLSTTLSEKLEVAGPNIPHFTKERVRRM----KLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           +L     +K +    +  H   + ++++    ++L+VLDDV+   QL    GE D FG G
Sbjct: 265 LLDDI--DKGKNRKISNVHEGMDAIKKVLSLRRVLVVLDDVDNFEQLNHFAGEHDWFGPG 322

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++TTR+K +L        K + +  L  EEA + F  +AFK     ED       +V
Sbjct: 323 SRILITTRNKHLLHV-----DKYHEIEELNSEEALQLFSLYAFKPTCHQEDYEDLQDRIV 377

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            Y KG PL L+VLGS LC +  S W   LH L R     I +I ++LKIS++ L      
Sbjct: 378 KYAKGLPLALQVLGSHLCERTPSEWESELHKLER---EPIQEIQNVLKISYDGLDRTQGE 434

Query: 237 IFLDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQ 293
           IFLDIACFF+G+DKDFV+ ILD  +        +L DK L++I  N + MHD++Q+MG  
Sbjct: 435 IFLDIACFFKGQDKDFVSRILDGCDFYAESGFSVLCDKCLITILDNKIYMHDLIQQMGWH 494

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IVR+++ ++PGK SRLW+ +++ RVL  N+GT+AI+GIFLD+S  K +     AF  M++
Sbjct: 495 IVREQNPEKPGKWSRLWEREDVFRVLTRNEGTEAIKGIFLDMSTSKQLQFTTEAFKVMND 554

Query: 354 LRLFKFYVPKFYEIE-KLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           LRL K +    Y+   K  +++   ++  S+V      ++  ++LRYLHWD YPL +LPS
Sbjct: 555 LRLLKVHQDANYDSAVKYWTLAGLFEMHLSQVHFCRDFEFPSQELRYLHWDGYPLESLPS 614

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           NF  +NLVELNLRCS ++Q WE E          FK L                      
Sbjct: 615 NFYAENLVELNLRCSNIKQLWETEL---------FKKLKV-------------------- 645

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
              IN S+  +L + P  S                     C+ +LE+L L GC  L+ + 
Sbjct: 646 ---INLSHSKHLNKIPNPS---------------------CVPNLEILTLEGCINLESLP 681

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
            S  KLR L TL   GC NL  FPEI+  ME L+++  D T I +LPSS E+L GLE L 
Sbjct: 682 RSIYKLRRLKTLCCGGCKNLRSFPEIMGDMEKLRKLDLDNTAIVKLPSSIEHLKGLEYLD 741

Query: 593 VEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLE-SFP 650
           + +C  L  +P +I +L  L ++     S + +LP  +     L+ L   + + L    P
Sbjct: 742 LSNCKDLITVPQSICNLTSLKFLNFDFCSKLEKLPEDLK---SLKCLQKLYLQDLNCQLP 798

Query: 651 RTFLLGLSAMGLLHISDYAVR--EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
              + GL ++ +L++S+  +   EIP E+  LSSL+ L LS N+F S+PA I Q+S+L+ 
Sbjct: 799 S--VSGLCSLKVLNLSECNLMDGEIPSEVCQLSSLKELDLSWNHFSSIPASISQLSKLKA 856

Query: 709 IHLEDFNMLQSLPELPLCLKYL 730
           + L     L  +PELP  L++L
Sbjct: 857 LGLSHCRNLLQIPELPSTLQFL 878



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 139/276 (50%), Gaps = 29/276 (10%)

Query: 494  VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
            + +LYL  +AI+E+PSSI+ L+ L     R CK L+ +  S C+L+ L  L    C  L 
Sbjct: 1136 LQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKYLQVLCCTNCSKLG 1195

Query: 554  HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
             FPE++E M +L+ ++   T I +LPSS ENL GLE L +  C KL  LP +I +L+ L 
Sbjct: 1196 SFPEVMENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKKLVTLPTHICNLKSLK 1255

Query: 614  YI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
             + +   S +++LP S+     L  LD+  C G  + P     GL ++ +LH++   + +
Sbjct: 1256 TLHVYGCSKLNKLPKSLGSLQCLEHLDAG-CLGSIAPPLPSFSGLCSLRILHLNGLNLMQ 1314

Query: 673  --IPQEIAYLSSLEILYLSG-------------------------NNFESLPAIIKQMSQ 705
              I  +I  L SLE+L L+                          N+   +PA I Q+S+
Sbjct: 1315 WSIQDDICRLYSLEVLDLTNCNLIDDGTADEIFHLSSLQVLLLSRNHISKIPAGISQLSK 1374

Query: 706  LRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
            L+ +      M   +PELP  L+ + +  C  L +L
Sbjct: 1375 LQVLGFSHCEMAVEIPELPSSLRSIDVHACTGLITL 1410



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 137/568 (24%), Positives = 237/568 (41%), Gaps = 97/568 (17%)

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASA 621
            ME L+++Y D T I E+PSS ++L  L   +  +C  L++LP +I  L+Y          
Sbjct: 1133 MECLQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKY---------- 1182

Query: 622  ISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLS 681
                         L+ L  ++C  L SFP   +  ++ +  LH+   A++++P  I  L 
Sbjct: 1183 -------------LQVLCCTNCSKLGSFPEV-MENMNNLRELHLHGTAIQDLPSSIENLK 1228

Query: 682  SLEILYL-SGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
             LE L L S     +LP  I  +  L+ +H+   + L  LP+    L+ L  +D   L S
Sbjct: 1229 GLEFLDLASCKKLVTLPTHICNLKSLKTLHVYGCSKLNKLPKSLGSLQCLEHLDAGCLGS 1288

Query: 741  L-PVLP----FC-LESLDLTGCNMLRSLPELPLC----LQYLNLEDCNMLRSLPE---LP 787
            + P LP     C L  L L G N+++   +  +C    L+ L+L +CN++          
Sbjct: 1289 IAPPLPSFSGLCSLRILHLNGLNLMQWSIQDDICRLYSLEVLDLTNCNLIDDGTADEIFH 1348

Query: 788  LCLQLLTVRNCNRLQSLPEILLCLQELDASVLE--KLSKHSPDLQWAPESLKSAAICFEF 845
            L    + + + N +  +P  +  L +L        +++   P+L   P SL+S     + 
Sbjct: 1349 LSSLQVLLLSRNHISKIPAGISQLSKLQVLGFSHCEMAVEIPEL---PSSLRS----IDV 1401

Query: 846  TNCLKLNGKAN-NKILADSLLRIRHMAIASLRLGYEM------AINEKLSELRGSLIVLP 898
              C  L   +N + +   SL +    AI  L  G         A  +     +G  I++P
Sbjct: 1402 HACTGLITLSNPSSLFWASLFKCFKSAIQDLECGNHCYDPSPEAWPDFCYFGQGISILIP 1461

Query: 899  -GSEIPDWFSNQSSGSSICIQLPPH-SSCRNLIGFAFCAV---LDSKKVDSD-------- 945
              S IP+W  +Q +GS +  +LP +    ++L+GFA  +V   LD++ VD          
Sbjct: 1462 RSSGIPEWIRHQKNGSRVTTELPRYWYKNKDLLGFALFSVHIPLDNESVDISEDEDLPCC 1521

Query: 946  ------CFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGF 999
                   FR    +F  DL + +  E    D             S +V + + P   V  
Sbjct: 1522 SLKCELTFRGDQFAFLDDLSLDSWCECYKNDGA-----------SGQVWVLYYP--KVAI 1568

Query: 1000 PDGYHHT-----IATFKFFAERKFYKIKRCGLCPVYANPSETKDNTFTINFATEVWKLDD 1054
             + YH        A+F  +      K+++CG+  +Y + ++       I  +     L D
Sbjct: 1569 KEKYHSNKWRRLKASFHCYLNGTPVKVEKCGMQLIYVD-NDVYSRPTKIQHSDSQENLGD 1627

Query: 1055 LPSASGTLDVEELELSPKRICRANQINT 1082
              S      VE++ ++ +R C   Q  T
Sbjct: 1628 QRST-----VEDVNVNDRRSCDDAQNTT 1650



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 125/283 (44%), Gaps = 57/283 (20%)

Query: 397  LRYLHWDTYPLRTLPSNFKPKN-LVELNLR-CSKVEQPWEGEKACVPSSIQNFKYLSALS 454
            L+ L+ D   ++ +PS+    + LVE   R C  +E         +P SI   KYL  L 
Sbjct: 1136 LQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLES--------LPRSICRLKYLQVLC 1187

Query: 455  FKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECL 514
               C  L SFP                    E  +    +  L+L  +AI+++PSSIE L
Sbjct: 1188 CTNCSKLGSFP--------------------EVMENMNNLRELHLHGTAIQDLPSSIENL 1227

Query: 515  TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSD--R 572
              LE LDL  CK+L  + T  C L+SL TL + GC  L   P+ L  ++ L+ + +    
Sbjct: 1228 KGLEFLDLASCKKLVTLPTHICNLKSLKTLHVYGCSKLNKLPKSLGSLQCLEHLDAGCLG 1287

Query: 573  TPITELPS--------------------SFEN----LPGLEVLFVEDCSKLDN-LPDNIG 607
            +    LPS                    S ++    L  LEVL + +C+ +D+   D I 
Sbjct: 1288 SIAPPLPSFSGLCSLRILHLNGLNLMQWSIQDDICRLYSLEVLDLTNCNLIDDGTADEIF 1347

Query: 608  SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
             L  L  +L + + IS++P+ ++  + L+ L  SHC+     P
Sbjct: 1348 HLSSLQVLLLSRNHISKIPAGISQLSKLQVLGFSHCEMAVEIP 1390



 Score = 43.5 bits (101), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 95/237 (40%), Gaps = 43/237 (18%)

Query: 418  NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL-HFVCPVTI 476
            NL EL+L  + ++         +PSSI+N K L  L    C+ L + P+++ +     T+
Sbjct: 1206 NLRELHLHGTAIQD--------LPSSIENLKGLEFLDLASCKKLVTLPTHICNLKSLKTL 1257

Query: 477  NFSYCVNLIEFPQISGKVTRL-YLGQSAIEEVP---SSIECLTDLEVLDLRGCKRLK-RI 531
            +   C  L + P+  G +  L +L    +  +     S   L  L +L L G   ++  I
Sbjct: 1258 HVYGCSKLNKLPKSLGSLQCLEHLDAGCLGSIAPPLPSFSGLCSLRILHLNGLNLMQWSI 1317

Query: 532  STSFCKLRSLVTLILLGC--LNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
                C+L SL  L L  C  ++     EI         + S R  I+++P+    L  L+
Sbjct: 1318 QDDICRLYSLEVLDLTNCNLIDDGTADEIFHLSSLQVLLLS-RNHISKIPAGISQLSKLQ 1376

Query: 590  VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
            VL    C                      A  I +LPSS      LRS+D   C GL
Sbjct: 1377 VLGFSHCE--------------------MAVEIPELPSS------LRSIDVHACTGL 1407


>gi|255569048|ref|XP_002525493.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223535172|gb|EEF36851.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1084

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 286/749 (38%), Positives = 390/749 (52%), Gaps = 114/749 (15%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ VG+WGM GIGKTT+A AIF+  S +FEG CF+ +++  SE  G L  L+ ++LS  L
Sbjct: 205 IRTVGLWGMSGIGKTTIAGAIFNTLSSQFEGCCFLENIKEESERCG-LVPLRDKLLSEIL 263

Query: 67  SE-KLEVAGPNIPHFT-KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            E  + +A P+I   + K R+R  K+L+VLDDVN+V Q++ LIG  D FG GSR++VT+R
Sbjct: 264 MEGNVHIATPSIGSTSLKNRLRHKKVLLVLDDVNDVDQIETLIGRCD-FGLGSRVLVTSR 322

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           DK+VL+    E   IY V GL  +EA + F   AFK+N    D    S  VV + +GNPL
Sbjct: 323 DKQVLKNVVDE---IYEVEGLSDDEALQLFNLHAFKDNCSTTDKIKLSYRVVKHAQGNPL 379

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L+VLGSSL  + K  W   L  L R  + +I   + +L+ SF+ L    KSIFLDIACF
Sbjct: 380 ALKVLGSSLFARSKQDWESALEKLERTPQPKI---FHVLRSSFDALDDEEKSIFLDIACF 436

Query: 245 FEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F+G+   FV  IL+    S    + +L  K LVSI  N L MHD+LQEM ++IV QES K
Sbjct: 437 FKGQQIGFVKKILNGCGLSAGIGISVLAGKCLVSIQENKLEMHDLLQEMAQEIVHQESIK 496

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
           E GKRSRLW P +  +VL  N GT+ +EGIF D  K+  ++L  RAF  +          
Sbjct: 497 ELGKRSRLWSPSDACQVLTKNLGTERVEGIFFDTYKMGAVDLSSRAFVRIVG-------- 548

Query: 362 PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVE 421
                             +  KV LP GLD+L  +LRYLH D YPL  +PSNF+ +NLV+
Sbjct: 549 ------------------NNCKVNLPQGLDFLSDELRYLHGDGYPLSYMPSNFQAENLVQ 590

Query: 422 LNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC 481
           L L  S ++Q W G                                      V +  S C
Sbjct: 591 LTLAYSSIKQLWTG--------------------------------------VQLILSGC 612

Query: 482 VNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSL 541
            ++ EFP +S  + +L+L  +AIEE+PSSI+   +L  L L+ CKR  R+  +  K + L
Sbjct: 613 SSITEFPHVSWDIKKLFLDGTAIEEIPSSIKYFPELVELSLQNCKRFLRLPRTIWKFKLL 672

Query: 542 VTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDN 601
             L L GC     FPEILE M  LK +Y D T I+ LPS   NLPGL  L +  C  L  
Sbjct: 673 QKLNLSGCSTFVSFPEILEVMGSLKYLYLDGTGISNLPSPMRNLPGLLSLELRSCKNLYG 732

Query: 602 LPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMG 661
           L + I            +  + + P++V     LR L+ S C                  
Sbjct: 733 LQEVI------------SGRVVKSPATVGGIQYLRKLNLSGC------------------ 762

Query: 662 LLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP 721
                   + E+P  I  L SLE L LS N FE +P  I ++ +L+++ L D   L SLP
Sbjct: 763 -------CLLEVPYCIDCLPSLESLDLSRNLFEEIPVSINKLFELQYLGLRDCKKLISLP 815

Query: 722 ELPLCLKYLHLIDCKMLQSLPVLPFCLES 750
           +LP  L  L    C  L+S  + P  +E 
Sbjct: 816 DLPPRLTKLDAHKCCSLKSASLDPTGIEG 844



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 126/507 (24%), Positives = 198/507 (39%), Gaps = 137/507 (27%)

Query: 533  TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
            +S  +L + V LIL GC ++  FP +      +K+++ D T I E+PSS +  P L  L 
Sbjct: 596  SSIKQLWTGVQLILSGCSSITEFPHV---SWDIKKLFLDGTAIEEIPSSIKYFPELVELS 652

Query: 593  VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
            +++C +                         +LP ++    +L+ L+ S C    SFP  
Sbjct: 653  LQNCKRF-----------------------LRLPRTIWKFKLLQKLNLSGCSTFVSFPEI 689

Query: 653  FLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE 712
                L  MG                    SL+ LYL G    +LP+ ++ +  L  + L 
Sbjct: 690  ----LEVMG--------------------SLKYLYLDGTGISNLPSPMRNLPGLLSLELR 725

Query: 713  DFNMLQSLPEL--------PLC------LKYLHLIDCKMLQSLPVLPFC------LESLD 752
                L  L E+        P        L+ L+L  C +L+    +P+C      LESLD
Sbjct: 726  SCKNLYGLQEVISGRVVKSPATVGGIQYLRKLNLSGCCLLE----VPYCIDCLPSLESLD 781

Query: 753  LTGCNMLRSLP---ELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILL 809
            L+  N+   +P        LQYL L DC  L SLP+LP  L  L    C  L+S      
Sbjct: 782  LSR-NLFEEIPVSINKLFELQYLGLRDCKKLISLPDLPPRLTKLDAHKCCSLKS------ 834

Query: 810  CLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRH 869
                LD                 P  ++     F FTNC  L+     KI+A +L + + 
Sbjct: 835  --ASLD-----------------PTGIEGNNFEFFFTNCHSLDLDERRKIIAYALTKFQ- 874

Query: 870  MAIASLRLGYEMAINEKLSELRGSLIVLPGSE---IPDWFSN-QSSGSSICIQLPPHSSC 925
              + S RL ++M+             +L G     IP W       G+S  +QLP + + 
Sbjct: 875  --VYSERLHHQMS------------YLLAGESSLWIPSWVRRFHHKGASTTVQLPSNWAD 920

Query: 926  RNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKH---VDLG------YNSR 976
             + +GF          +  DC R    +   D ++K     K+    D G      Y   
Sbjct: 921  SDFLGFELVT-----SIAVDC-RICKCNGDHDFQVKCRYHFKNEYIYDGGDDLYCYYGGW 974

Query: 977  YIEDLIDSDRVILGFKPCLNVGFPDGY 1003
            Y    ++ +  ++G+ PC+NV   D +
Sbjct: 975  YGRRFLNGEHTLVGYDPCVNVTKEDRF 1001


>gi|147828597|emb|CAN68630.1| hypothetical protein VITISV_003859 [Vitis vinifera]
          Length = 1500

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 366/1112 (32%), Positives = 523/1112 (47%), Gaps = 201/1112 (18%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S+ V +VGI+G GGIGKTT+AK ++++   +F  + F+++VR +S++ G L +LQKQ+L 
Sbjct: 444  SNNVHMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANVREDSKSRG-LLYLQKQLLH 502

Query: 64   TTLSEK---LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
              L ++   +      I H  K+R+   K+L+VLDDV+++ QL+ L G+ + FG GSRI+
Sbjct: 503  DILPKRKNFIRNVDEGI-HMIKDRLCFKKVLLVLDDVDDLNQLEALAGDHNWFGPGSRII 561

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            VTTRDK +LE    E   +Y    L+ +EA E FC  AFK+NH  ED    S SVV Y  
Sbjct: 562  VTTRDKHLLEVH--EXDALYEAKKLDHKEAVELFCWNAFKQNHPKEDYETLSNSVVHYVN 619

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            G PL L+VLG  L  K    W   L  L R    EI  +   LK S++ L    + IFLD
Sbjct: 620  GLPLGLKVLGCFLYGKTVCQWESELQKLQREPNQEIQRV---LKRSYDVLDYTQQQIFLD 676

Query: 241  IACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
            +ACFF GEDKDFV   LD     +ES +  +L DK  ++I  N + MHD+LQ+MGR IVR
Sbjct: 677  VACFFNGEDKDFVTRFLDACNFYAESGI-GVLGDKCFITILDNKIWMHDLLQQMGRDIVR 735

Query: 297  QESEKEPGKRSRLWDPKEISRVL-KHNKGTDAIEGIFL--DLSKIKGINLDPRAFTNMSN 353
            QE  K+PGK SRL  P+ ++RVL +    T+A E  F+  DL           AFT   N
Sbjct: 736  QECPKDPGKWSRLCYPEVVNRVLTRKXVRTNANESTFMXKDLEX---------AFTREDN 786

Query: 354  LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
                                         KV+L    ++   +LRYLHW  YPL +LP  
Sbjct: 787  -----------------------------KVKLSKDFEFPSYELRYLHWHGYPLESLPXX 817

Query: 414  FKPKNLVELNLRCSKVEQPWEGE----------KAC------VPSSIQNFKYLSALSFKG 457
            F  ++LVEL++  S +++ WEG+           +C      +P    +   L  L   G
Sbjct: 818  FYAEDLVELDMCYSSLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDITVSAPNLQKLILDG 877

Query: 458  CQSLRS------------------------FPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
            C SL                          FPS +       +NFS C  L +FP I G 
Sbjct: 878  CSSLLEVHPSIGKLNKLILLNLKNCKKLICFPSIIDMKALEILNFSGCSGLKKFPNIQGN 937

Query: 494  VT---RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
            +     LYL  +AIEE+PSSI  LT L +LDL+ CK LK + TS CKL+SL  L L GC 
Sbjct: 938  MENLFELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSGCS 997

Query: 551  NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
             L  FPE+ E M+ LK +  D TPI  LPSS + L GL +L +  C  L +L + + +L 
Sbjct: 998  KLGSFPEVTENMDKLKELLLDGTPIEVLPSSIDRLKGLVLLNLRKCKNLVSLSNGMCNL- 1056

Query: 611  YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV 670
                                    L +L  S C  L + PR  L  L  +  LH    A+
Sbjct: 1057 ----------------------TSLETLVVSGCSQLNNLPRN-LGSLQRLAQLHADGTAI 1093

Query: 671  REIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ-SLPELPLCLKY 729
             + P  I  L +L++L   G    + P  +  +     +H    N +   LP      + 
Sbjct: 1094 AQPPDSIVLLRNLQVLIYPGCKILA-PTSLGSLFSFWLLHGNSSNGIGLRLPSSFSSFRS 1152

Query: 730  ---LHLIDCKMLQSLPVLPFC----LESLDLTGCNMLR---SLPELPLCLQYLNLEDCNM 779
               L L DCK+++       C    L+ LDL+  N L     + EL   L+ L L  C  
Sbjct: 1153 LSNLDLSDCKLIEGAIPNGICSLISLKKLDLSQNNFLSIPAGISELT-NLEDLRLGQCQS 1211

Query: 780  LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSA 839
            L  +PELPL L+ +   NC  L      +  LQ L                         
Sbjct: 1212 LTGIPELPLSLRDIDAHNCTALLPGSSSVSTLQGLQ------------------------ 1247

Query: 840  AICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAIN----EKLSELRGSLI 895
               F F NC K     ++      L    H+ ++S      +  +    +KL E     I
Sbjct: 1248 ---FLFYNCSKPVEDQSSDDKRTELQLFPHIYVSSTASDSSVTTSPVMMQKLLENIAFSI 1304

Query: 896  VLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSK------KVDSDCFRY 949
            V PG+ IP+W  +Q+ GSSI IQLP      + +GFA C+VL+         ++SD F Y
Sbjct: 1305 VFPGTGIPEWIWHQNVGSSIKIQLPTDWYSDDFLGFALCSVLEHLPERIICHLNSDVFDY 1364

Query: 950  FYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGF-----PDGYH 1004
                   DL+          D G++  +  D++ S+ V LG++PC  +       P+ ++
Sbjct: 1365 ------GDLK----------DFGHDFHWTGDIVGSEHVWLGYQPCSQLRLFQFNDPNEWN 1408

Query: 1005 HTIATFKFFAERKFYK-----IKRCGLCPVYA 1031
            H   +F+  A  +F       +K+CG+C +YA
Sbjct: 1409 HIEISFE--AAHRFNSSASNVVKKCGVCLIYA 1438


>gi|359489175|ref|XP_002264704.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1254

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 347/1069 (32%), Positives = 528/1069 (49%), Gaps = 152/1069 (14%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
            KTT+AK +++     F+GS F+ DV+  S+   G   L ++ L  TL  K ++   NI  
Sbjct: 235  KTTIAKMVYNDVLCHFKGSSFLEDVKERSKCHHGRLQLLQEFLHGTLMVK-DLKLSNIDE 293

Query: 79   --HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
              +  K R+ R ++L++LDDV+ + QLK L+G  + FG GSRI++TTRDK +L   R + 
Sbjct: 294  GINMIKNRLCRKRILLILDDVDHLDQLKLLVGSCEWFGPGSRIIITTRDKHLLNVHRVD- 352

Query: 137  KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
              +Y V  L+ +EA + F   AFK+N  P++    S  V++Y KG PL L+VLGS L   
Sbjct: 353  -AVYEVKELDHKEAIQLFSRHAFKQNIPPKNYEDLSNCVINYAKGLPLALKVLGSFLYGM 411

Query: 197  RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
                W   L  L      EIH++   L+ISF+ L    K IFLDIACFF+GEDKDF++ I
Sbjct: 412  TIDQWKSALDKLKGKPNMEIHNV---LRISFDGLDHTEKQIFLDIACFFKGEDKDFISRI 468

Query: 257  LDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
            LD      +  L IL D+ L++IS + ++MHD++Q+MG++IVR++   +P K SRLWDP 
Sbjct: 469  LDGCNFFANIGLKILCDRCLITISNSKIHMHDLIQQMGQEIVREKYPDDPNKWSRLWDPD 528

Query: 314  EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
            +I R     +G   IE I LD S++K I L  + F+ M  LRL K Y        K    
Sbjct: 529  DIYRAFLRKEGMKKIEAISLDFSRLKEIQLSTKVFSRMKKLRLLKVYWSDHSSFTK---- 584

Query: 374  STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
                    SKV +P   +    +LRYL+W+ Y L  LPSNF  +NLVEL LR S +++ W
Sbjct: 585  ------KESKVFIPKDFEIPSHELRYLYWEGYSLNCLPSNFHGENLVELELRYSTIKRLW 638

Query: 434  EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG- 492
            +G K            L  L F                    IN S+   L +  + SG 
Sbjct: 639  KGSKG-----------LEKLKF--------------------INLSHSEKLTKISKFSGM 667

Query: 493  -KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
              + RL L G +++ +V SS+  L  L  L L+ C++L+   +S  +L SL  L + GC 
Sbjct: 668  PNLERLNLEGCTSLRKVHSSLGVLKKLTSLQLKDCQKLESFPSSI-ELESLEVLDISGCS 726

Query: 551  NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
            N E FPEI   M HL++IY +++ I ELP+S E L  LE+L + +CS  +  P+    ++
Sbjct: 727  NFEKFPEIHGNMRHLRKIYLNQSGIKELPTSIEFLESLEMLQLANCSNFEKFPEIQRDMK 786

Query: 611  YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT-----FLLG--------- 656
             L++++   +AI +LPSS+     LR L    CK L   P +     FL G         
Sbjct: 787  SLHWLVLGGTAIKELPSSIYHLTGLRELSLYRCKNLRRLPSSICRLEFLHGIYLHGCSNL 846

Query: 657  ---------LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQL 706
                     +  +G L +   +++E+P  I +L  LE L L+   N  +LP+ I  +  L
Sbjct: 847  EAFPDIIKDMENIGRLELMGTSLKELPPSIEHLKGLEELDLTNCENLVTLPSSICNIRSL 906

Query: 707  RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC-LESLDLTGCNMLR-SLPE 764
              + L++ + LQ LP+ P+            LQ   ++  C L  L+L+GCN++  ++P 
Sbjct: 907  ERLVLQNCSKLQELPKNPM-----------TLQCSDMIGLCSLMDLNLSGCNLMGGAIPS 955

Query: 765  LPLCL---QYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEK 821
               CL   + LNL   N +R +P     L++L + +C  L+S+ E+   L+ LDA     
Sbjct: 956  DLWCLSSLRRLNLSGSN-IRCIPSGISQLRILQLNHCKMLESITELPSSLRVLDA---HD 1011

Query: 822  LSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEM 881
             ++       +     S   CF+                          AI  L  G E 
Sbjct: 1012 CTRLDTLSSLSSLLQCSLFSCFK-------------------------SAIQELEHGIES 1046

Query: 882  AINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLPPHSSCRN-LIGFAFCAV--- 936
                  S+  G  IV+PGS  IP+W SNQ  GS + ++LP +    N  +GFA C++   
Sbjct: 1047 ------SKSIGINIVIPGSRGIPEWISNQELGSEVTVELPMNWCEDNDFLGFALCSLYVP 1100

Query: 937  LDSKKVDS--DCFRYFYVSFQFDL--EIKTLSETKHVDLGYNSRYIEDLID----SDRVI 988
            LD    D   +C    +   QF    +I   S  K+ + G  S Y+    D    SD V+
Sbjct: 1101 LDDAFEDGGLECRLIAFHGDQFRRVDDIWFKSSCKYYENGGVS-YLHKCCDNGDVSDCVL 1159

Query: 989  -LGFKPCLNVG---FPDGYHHTIATFK--FFAERKFYKIKRCGLCPVYA 1031
             + + P + +      + + H  A F   +    K +K+K+CG+  +YA
Sbjct: 1160 WVTYYPQIAIKKKHRSNQWRHFKALFNGLYNCGSKAFKVKKCGVHLIYA 1208


>gi|147821370|emb|CAN67940.1| hypothetical protein VITISV_013693 [Vitis vinifera]
          Length = 1386

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 367/1224 (29%), Positives = 549/1224 (44%), Gaps = 228/1224 (18%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
            + +++VGI+G GGIGKTT+AK ++++  ++F G+ F+ DVR  +   G    LQ+Q+L  
Sbjct: 167  NDIRMVGIYGPGGIGKTTIAKIVYNEIQYQFTGASFLQDVR-ETFNKGYQLQLQQQLLHD 225

Query: 65   TLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
            T+   +E +  N   +  K R+R  K+LIV+DDV+ + QL+ + G    FG GS I++TT
Sbjct: 226  TVGNDVEFSNINKGVNIIKSRLRSKKVLIVIDDVDRLQQLESVAGSPKWFGPGSTIIITT 285

Query: 124  RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
            RD+ +L ++       ++   L +EEA + F   AFK+N   ED    S  +V Y +G P
Sbjct: 286  RDQHLLVEYGVTIS--HKATXLHYEEALQLFSQHAFKQNVPXEDYVDLSNCMVQYAQGLP 343

Query: 184  LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
            L L+V GSSL       W      L +   + + +I D+L+ISF+ L P  K +FLDIAC
Sbjct: 344  LALKVXGSSLQGMTXDEWKSASDKLKK---NPMKEINDVLRISFDGLDPSQKEVFLDIAC 400

Query: 244  FFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
            FF+GE KDFV+ ILD      +  + +L D+ LV+IS N + MHD++ EMG  IVR+E  
Sbjct: 401  FFKGECKDFVSRILDGCNLFATCNIRVLHDRCLVTISDNMIQMHDLIHEMGWAIVREECP 460

Query: 301  KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
             +P K SRLWD  +I       +    I+ I LDLS+ + I  + + F+ M  LRL K Y
Sbjct: 461  GDPCKWSRLWDVDDIYDAFSRQEEMQNIQTISLDLSRSREIQFNTKVFSKMKKLRLLKIY 520

Query: 361  VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                  +       T E+    KV LP    + P  LRYLHW    L +LP NF  K+L+
Sbjct: 521  CNDHDGL-------TREKY---KVLLPKDFQF-PHDLRYLHWQRCTLTSLPWNFYGKHLI 569

Query: 421  ELNLRCSKVEQPWEGEK----------------------------------ACVP----- 441
            E+NL+ S ++Q W+G K                                   C       
Sbjct: 570  EINLKSSNIKQLWKGNKCLEELKGIDLSNSKQLVKMPKFSSMPNLERLNLEGCTSLCELH 629

Query: 442  SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV---TRLY 498
            SSI + K L+ L+  GC+ LRSFPS++ F     +  + C NL +FP+I G +     LY
Sbjct: 630  SSIGDLKSLTYLNLAGCEQLRSFPSSMKFESLEVLYLNCCPNLKKFPEIHGNMECLKELY 689

Query: 499  LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
            L +S I+E+PSSI  L  LEVL+L  C   ++       ++ L  L L GC   E+FP+ 
Sbjct: 690  LNESGIQELPSSIVYLASLEVLNLSNCSNFEKFPXIHGNMKFLRELYLEGCPKFENFPDT 749

Query: 559  LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
               M HL+R++  ++ I ELPSS   L  LE+L +  CSK +  P+  G+++ L  +   
Sbjct: 750  FTYMGHLRRLHLRKSGIKELPSSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLR 809

Query: 619  ASAISQLPSSVA----------------------LSNM---------------------- 634
             +AI +LP+S+                        +NM                      
Sbjct: 810  XTAIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRLRELCLHRSGIKELPGSIGY 869

Query: 635  ---LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG- 690
               L +L+ S+C   E FP      +  +  L + + A++E+P  I  L +LE L LSG 
Sbjct: 870  LESLENLNLSYCSNFEKFPE-IQGNMKCLKELSLENTAIKELPNSIGRLQALESLTLSGC 928

Query: 691  NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC------LKYLHLIDCKMLQSLPVL 744
            +N E  P I K M  L  + L++     ++  LP        L +L+L +CK L+SLP  
Sbjct: 929  SNLERFPEIQKNMGNLWALFLDE----TAIEGLPYSVGHLTRLDHLNLDNCKNLKSLPN- 983

Query: 745  PFC----LESLDLTGCNMLRS--------------------LPELPLCLQYLN------L 774
              C    LE L L GC+ L +                    + ELP  +++L       L
Sbjct: 984  SICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRETGISELPSSIEHLRGLKSLEL 1043

Query: 775  EDCNMLRSLPELP---LCLQLLTVRNCNRLQSLPEIL----LCLQELDASVLEKLSKHSP 827
             +C  L +LP       CL  L VRNC +L +LP+ L     CL  LD      + +  P
Sbjct: 1044 INCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCNLMEEEIP 1103

Query: 828  DLQWAPESLKSAAICFEFTNCLKLNGKANNKI----------------LADSLLRIRHMA 871
               W    L    I      C+        K+                L  SL  I    
Sbjct: 1104 SDLWCLSLLVFLNISENRMRCIPAGITQLCKLRTLLINHCPMLEVIGELPSSLGWIEAHG 1163

Query: 872  IASLRL-------------GYEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICI 917
              SL                 +  I +K +      I++PGS  IP+W S+Q  G  + +
Sbjct: 1164 CPSLETETSSSLLWSSLLKHLKSPIQQKFN------IIIPGSSGIPEWVSHQRMGCEVSV 1217

Query: 918  QLPPH-SSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVD------ 970
            +LP +     NL+GF           D +C R         L I    ++K +D      
Sbjct: 1218 ELPMNWYEDNNLLGFVLFFHHVPLDDDDECVRTSGFIPHCKLAISHGDQSKRLDDIGFHP 1277

Query: 971  ---------LGYNS-RYIEDLIDSDRVILGFKPCLNVGFPDGYH------------HTIA 1008
                     L Y S RY         + + + P   +G P  Y             + + 
Sbjct: 1278 HCKTYSISGLSYGSTRYDSGSTSDPALWVTYFP--QIGIPSKYRSRKWNNFKAHFDNPVG 1335

Query: 1009 TFKFF-AERKFYKIKRCGLCPVYA 1031
               F   E   +K+K CG+  +YA
Sbjct: 1336 NASFTCGENASFKVKSCGIHLIYA 1359


>gi|224131066|ref|XP_002328445.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838160|gb|EEE76525.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1176

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 347/975 (35%), Positives = 500/975 (51%), Gaps = 112/975 (11%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S+ TV IVGIWGM GIGK+T A+A++ +   +FEG CF  +VR  S+  G    +  +ML
Sbjct: 194  STGTVLIVGIWGMCGIGKSTTAEAVYHRNCSKFEGHCFFQNVREESKKHG----IDHRML 249

Query: 63   STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
                                   +R K+LIVLDDVN+   LK L+GE   FGQGSRI+VT
Sbjct: 250  -----------------------QRKKVLIVLDDVNDPQVLKYLVGEDGLFGQGSRIIVT 286

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            +RD++VL     +E KIY V  L+ ++A   F   AFK+N+  E     S++VVS  KG 
Sbjct: 287  SRDRQVLIN-ACDEDKIYEVKILDKDDALRLFSLHAFKQNNPIEGYIGLSKTVVSCVKGI 345

Query: 183  PLVLEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PLVLEVLG+S+  KR   +W   +  L     +   DI   L++ +++L    K IFLDI
Sbjct: 346  PLVLEVLGASVYSKRSVEYWESKVAQLR---TNGGEDIKKCLEMCYHELDQTQKKIFLDI 402

Query: 242  ACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
            ACFF    +D +   LD  E   +D LID  L+ I  N + MHD+L ++G++IV QE   
Sbjct: 403  ACFFGRCKRDLLQQTLDLEERSGIDRLIDMCLIKIVQNKIWMHDMLLKLGKKIVLQE-HV 461

Query: 302  EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSNLRLFKFY 360
            +P +RSRLW   +++RVL   +GT  +E I L+L  I K + L P AF  MSNLRL KFY
Sbjct: 462  DPRERSRLWKADDVNRVLT-TQGTRKVESIILNLLAITKEMILSPTAFEGMSNLRLLKFY 520

Query: 361  VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
             P F+     PS          ++ LP GL +L  +LR LHW  YPL++LPSNF P+ LV
Sbjct: 521  YPPFFGD---PSKEKIMNRRRVRIHLPQGLHFLSNELRILHWYNYPLKSLPSNFCPEKLV 577

Query: 421  ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
            E ++ CS++EQ W   +      + N +  S LS      L  FP NL       +N   
Sbjct: 578  EFHMHCSQLEQLWNEFQPLKNLKVMNLRSSSKLSLSD-SDLSKFP-NLE-----VLNLGQ 630

Query: 481  CVNLIEFP---QISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFC 536
            C  L   P   + S ++T L L +  ++  +PSSI CL+ L  L L  C+ L  +  S  
Sbjct: 631  CRGLAGLPSSIKYSTRLTELILYRCDSLSTLPSSIGCLSQLVKLKLIFCRSLASLPDSIG 690

Query: 537  KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR-TPITELPSSFENLPGLEVLFVED 595
            +L+SL  L L  C  L   P    +++ L ++   R + +  LP +   L  L  L +  
Sbjct: 691  ELKSLEDLYLYFCSKLASLPNSFRELKCLVKLNLIRCSELVSLPDNIGELKSLVELKLFS 750

Query: 596  CSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
            CSKL++LP++IG L+ L  + L+  S ++ LP+S+     L  L+ S+   L S P  F 
Sbjct: 751  CSKLESLPNSIGGLKCLAELCLSNFSKLTSLPNSIGKLKCLVKLNLSYFSKLASLPDCFG 810

Query: 655  LGLSAMGLLHISDY-AVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLE 712
              L ++ LLHIS    +  +P  I  L  L  L LSG +   +LP  I  +  L++I+LE
Sbjct: 811  -ELKSLVLLHISFCPKLVSLPNSIGQLKCLAELNLSGCSELANLPNSIYYLESLKWINLE 869

Query: 713  DFNMLQSLPEL------------PLCLKYLHLIDCKMLQSLPVLPFCLESL-DLT-GCNM 758
               ML   P L              CL+YL+L     +  +P     L SL DL   CN 
Sbjct: 870  RCYMLNKSPVLNPRCSEVEEIAFGGCLQYLNL-GASGVSEIPGSIGSLVSLRDLRLSCND 928

Query: 759  LRSLP----ELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL 814
               +P    +LP+ ++ L+L  C  L+ LPELP  LQ+L    C  L+SL  I +     
Sbjct: 929  FERIPANIKQLPMLIK-LDLHGCERLQHLPELPSSLQVLMASYCISLRSLASIFI----- 982

Query: 815  DASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIAS 874
                               +   +A+  F F+NCLKL+  A N+I+ D  LRIR MA + 
Sbjct: 983  ----------------QGGKEYAAASQQFNFSNCLKLDQNACNRIMEDVHLRIRRMASSL 1026

Query: 875  L-RLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPH----SSCRNLI 929
              R  +   I  +L         +PG E+P+WF  +++G S  + +P H    ++    +
Sbjct: 1027 FNREYFGKPIRVRL--------CIPGLEVPEWFCYKNTGGS-SLNIPAHWHRTTNTDQFL 1077

Query: 930  GFAFCAVL---DSKK 941
            GF FCAV+   +SKK
Sbjct: 1078 GFTFCAVVSFGNSKK 1092


>gi|147768286|emb|CAN64759.1| hypothetical protein VITISV_033530 [Vitis vinifera]
          Length = 1206

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 326/1017 (32%), Positives = 503/1017 (49%), Gaps = 155/1017 (15%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEF-EGSCFVSDVRGNSETAGGLEHLQKQMLSTT 65
            V++VGIWGM GIGK+T+A  ++++   +F EG CF+ +VR  S+  G L +LQ+++LS  
Sbjct: 218  VRMVGIWGMAGIGKSTIAYQVYNKIYAQFDEGYCFLPNVREESQRHG-LAYLQEELLSQI 276

Query: 66   LSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
                L     N   +F KER+   K+LIVLDDV+   QL+ L G  D FG GSRI++TT+
Sbjct: 277  SGGNLNKGNFNRGINFIKERLHSRKVLIVLDDVDMYEQLEVLAGNHDWFGAGSRIIITTK 336

Query: 125  DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
            DK +L    G +  IY V GL++ EA + FC  AFK +    D     ++ V Y +G PL
Sbjct: 337  DKTLL-NMHGVDA-IYNVEGLKYNEALKLFCWCAFKHDLPTADYMQLCKNFVKYIEGLPL 394

Query: 185  VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
             ++VLGS +  K    W   L  L RI      D+  +L+ISF+ L    K IFLDIACF
Sbjct: 395  AIKVLGSFVKNKTIDEWKSALDKLKRIPHK---DVQKVLRISFDGLDDNQKDIFLDIACF 451

Query: 245  FEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
            F+G+DKDFVA IL+  +   ++ + +L + SL+ +S N L MHB+LQEMG +IVRQE+ K
Sbjct: 452  FKGQDKDFVAKILESCDFFPANDIRVLEENSLILVSNNKLCMHBLLQEMGWEIVRQENVK 511

Query: 302  EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
             PGKRSRLW   E++ VL  N GT+A+EG+ LDLS  K ++    AFT M+ LR+ +FY 
Sbjct: 512  YPGKRSRLWFHDEVNHVLTTNTGTEAVEGLVLDLSASKELHXSAGAFTEMNRLRVLRFYN 571

Query: 362  PKF------------------------YEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKL 397
             K                         +EI++   M T+      K+ L   L +L   L
Sbjct: 572  VKMNGSLEYLSEXELFDTTYHPWRWRAHEIQRADEMQTD-----CKLHLSGDLKFLSNNL 626

Query: 398  RYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKG 457
            R L+W  YPL++LPSNF PK LVELN+  S++E  W+G+K     S +  K+        
Sbjct: 627  RSLYWHEYPLKSLPSNFHPKKLVELNMCSSRLEXLWKGDK-----SFEKLKF-------- 673

Query: 458  CQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDL 517
                              I  S+   L   P  SG                       +L
Sbjct: 674  ------------------IKLSHSQYLTRTPDFSGA---------------------PNL 694

Query: 518  EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
            E L L GCK + ++  S   L+ L+ L L GC NL+ F                      
Sbjct: 695  ERLILEGCKSMVKVHPSIGALQKLIFLNLXGCKNLKSF---------------------- 732

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
              +S  ++  L++L +  CSKL   P+ + +++ L  +L   +A+ +LPSS+   N L  
Sbjct: 733  --ASSIHMNSLQILTLSGCSKLKKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVL 790

Query: 638  LDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILYLSGNNFESL 696
            L+ ++CK L S P++ L  L+++ +L ++  + ++++P E+  L  L  L   G+  + +
Sbjct: 791  LNLTNCKKLVSLPQS-LCKLTSLQILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEV 849

Query: 697  PAIIKQMSQLRFIHL---EDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDL 753
            P  I  ++ L+ + L   +  N++ SL   P          C  L+SL  L   +++L L
Sbjct: 850  PPSITLLTNLQVLSLAGCKKRNVVFSLWSSPTV--------CLQLRSLLNLS-SVKTLSL 900

Query: 754  TGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQ------LLTVRNCNRLQSLPEI 807
            + CN+        L              +   +P  L        L++ +C  LQS+PE+
Sbjct: 901  SDCNLSEGALPSDLSSLSSLESLDLSKNNFITIPASLNRLSQLLYLSLSHCKSLQSVPEL 960

Query: 808  LLCLQELDASVLEKLSKHSPDLQW----APESLKSAAICFEFTNCLKLNGKANNKILADS 863
               +Q++ A        H P L+     A  S K   + F F++C +L    ++  +   
Sbjct: 961  PSTIQKVYAD-------HCPSLETFSLSACASRKLNQLNFTFSDCFRLVENEHSDTVGAI 1013

Query: 864  LLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHS 923
            L  I+   +AS    +  A            +++PGS IP+WF +Q+ GSS+ ++LPPH 
Sbjct: 1014 LQGIQ---LASSIPKFVDANKGSPVPYNDFHVIVPGSSIPEWFIHQNMGSSVTVELPPHW 1070

Query: 924  SCRNLIGFAFCAVLDSKKVDSDCFRY--FYVSFQFD-LEIKTLSETK--HVDLGYNS 975
                L+G A CAV  +  +D    +Y  +    ++D   ++T S  K  HV  GY S
Sbjct: 1071 YNAKLMGLAVCAVFHADPIDWGYLQYSLYRGEHKYDSYMLQTWSPMKGDHVWFGYQS 1127


>gi|224145028|ref|XP_002325500.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862375|gb|EEE99881.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 709

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 261/626 (41%), Positives = 358/626 (57%), Gaps = 51/626 (8%)

Query: 15  MGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL-SEKLEVA 73
           MGGIGKTT+A+A+F+  S ++E  CF+++VR  SE  GGL  L+++ LS  L  E L + 
Sbjct: 1   MGGIGKTTIAEAVFNSISSQYESCCFITNVREKSEECGGLIRLREEFLSRVLEQENLRID 60

Query: 74  GPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKF 132
            P +     KER+R  K+  VLDDV++V Q++ LI   D FG GSRI+VT+RD++VL+  
Sbjct: 61  TPRMGSTLIKERIRHKKVFTVLDDVSDVEQVECLIERHDMFGPGSRILVTSRDRQVLKNV 120

Query: 133 RGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSS 192
             E   IY V  L   EA + F    FK NH P+D    S   V+Y KGNPL L+VLGS 
Sbjct: 121 ADE---IYEVEELNCSEARQLFSLSVFKGNHIPKDYKGLSIRAVNYAKGNPLALKVLGSF 177

Query: 193 LCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDF 252
           L  +RK  W   L+ L R  + +I   Y++LK+SF+ L    K+IFLDIACFF+G+  D+
Sbjct: 178 LFDQRKEDWENALNKLERNPQLKI---YNMLKVSFDALGDEEKNIFLDIACFFKGKQIDY 234

Query: 253 VASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRL 309
           V  ILD    S +  +  L ++ L++IS   L MHD+LQEM  +IVRQES KE GKRSRL
Sbjct: 235 VKRILDGCGFSTNIGVFFLAERCLITISNGKLEMHDLLQEMAFEIVRQESIKELGKRSRL 294

Query: 310 WDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEK 369
           W P+++++VL  N GT+ +EGIF D SKIK I L  +AF  M NLRL K Y         
Sbjct: 295 WSPRDVNQVLTKNLGTEKVEGIFFDTSKIKEIKLSSKAFARMYNLRLLKIY--------- 345

Query: 370 LPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKV 429
                  E     KV LP+GL  L  +LRYLHWD YPL++LPSNF P+NLVELNL  SKV
Sbjct: 346 -----NSEVGKNCKVYLPHGLKSLSDELRYLHWDGYPLKSLPSNFHPENLVELNLSHSKV 400

Query: 430 EQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
            + W+G++           + S  ++   Q+ R F  +L+      +N S C NL  +P+
Sbjct: 401 RELWKGDQV----------WFSQYTY-AAQAFRVFQESLNRKIS-ALNLSGCSNLKMYPE 448

Query: 490 ISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
            +  V  L   ++AI+E+P SI   + L  L+LR CK+L  +  S C L+S+V + + GC
Sbjct: 449 TTEHVMYLNFNETAIKELPQSIGHRSRLVALNLRECKQLGNLPESICLLKSIVIVDVSGC 508

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
            N+  FP I     +L   Y   T + E PSS  +L  +  L + +  +L NLP    S 
Sbjct: 509 SNVTKFPNIPGNTRYL---YLSGTAVEEFPSSVGHLSRISSLDLSNSGRLKNLPTEFSS- 564

Query: 610 EYLYYILAAASAISQLPSSVALSNML 635
                     S   QLPS    S +L
Sbjct: 565 ----------SVTIQLPSHCPSSELL 580



 Score = 46.2 bits (108), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 14/138 (10%)

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
           +  L +  CS L   P+   + E++ Y+    +AI +LP S+   + L +L+   CK L 
Sbjct: 432 ISALNLSGCSNLKMYPE---TTEHVMYLNFNETAIKELPQSIGHRSRLVALNLRECKQLG 488

Query: 648 SFPRTFLLGLSAMGLLHISDYA----VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
           + P +  L L ++ ++ +S  +       IP    Y      LYLSG   E  P+ +  +
Sbjct: 489 NLPESICL-LKSIVIVDVSGCSNVTKFPNIPGNTRY------LYLSGTAVEEFPSSVGHL 541

Query: 704 SQLRFIHLEDFNMLQSLP 721
           S++  + L +   L++LP
Sbjct: 542 SRISSLDLSNSGRLKNLP 559


>gi|296090597|emb|CBI40966.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 293/749 (39%), Positives = 408/749 (54%), Gaps = 89/749 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V++VGIWGMGGIGKTTLA+AI++Q S +FEG  ++ D  G      GL  LQ+++LS
Sbjct: 204 STDVRMVGIWGMGGIGKTTLAQAIYNQVSSQFEGCSYLEDA-GEDLRKRGLIGLQEKLLS 262

Query: 64  TTLS-EKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
             L  E +++ GP      K R+   ++ IVLD+V +   L+ L+G  D FGQGSRI++T
Sbjct: 263 QILGHENIKLNGPIS---LKARLCSREVFIVLDNVYDQDILECLVGSHDWFGQGSRIIIT 319

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TRDKR+L       + +Y V  L   EA E    +A K+    ++    S S+++Y +G 
Sbjct: 320 TRDKRLL--MSHGVRVVYEVKKLVHTEAIEFLGRYASKQQIVIDEFMELSNSIITYAQGL 377

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PLVL+VLGS L    K  W     +L+++ ++    I ++L+IS++ L  + K+IFLDIA
Sbjct: 378 PLVLKVLGSFLFSMSKHEWRS---ELDKLKDTPHGRIQEVLRISYDGLDDKEKNIFLDIA 434

Query: 243 CFFEGEDKDFVASILDDSES-DVLDI--LIDKSLVSISGN-FLNMHDILQEMGRQIVRQE 298
           CFF+GEDKD V  ILD      V  I  LIDKSL++IS N  + MHD+LQEMGR+I+RQ 
Sbjct: 435 CFFKGEDKDHVIKILDGCGFFAVCGIRGLIDKSLITISNNDKIVMHDLLQEMGRKIIRQT 494

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
           S KEPGKRSRLW  K+   VL  N GT  +EGIF +LS I+ I+   +AF  M  LRL K
Sbjct: 495 SPKEPGKRSRLWIYKDAYHVLSKNTGTQEVEGIFFNLSDIEEIHFTTKAFAGMDKLRLLK 554

Query: 359 FYVPKFYEIEKLPSMSTE-EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
           FY       +  PS ++E       KV +P    +   +LRYLH   YPL  LP +F PK
Sbjct: 555 FY-------DYSPSTNSECTSKRKCKVHIPRDFKFHYNELRYLHLHGYPLEQLPHDFSPK 607

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
           NLV+L+L CS V+Q W+G            K L  L F                    ++
Sbjct: 608 NLVDLSLSCSDVKQLWKG-----------IKVLDKLKF--------------------MD 636

Query: 478 FSYCVNLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            S+   L+E P  SG   + +L L G + + EV  ++  L  L  L LR CK LK I  S
Sbjct: 637 LSHSKYLVETPNFSGISNLEKLDLTGCTYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNS 696

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
            CKL+SL T I  GC  +E+FPE    +E LK +Y+D T I+ LPSS  +L  L+VL   
Sbjct: 697 ICKLKSLETFIFSGCSKVENFPENFGNLEQLKELYADETAISALPSSICHLRILQVLSFN 756

Query: 595 DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
            C                     +AS ++ LP   + S                F  + L
Sbjct: 757 GCKG-----------------PPSASWLTLLPRKSSNSG--------------KFLLSPL 785

Query: 655 LGLSAMGLLHISDYAVREIP--QEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE 712
            GL ++  L++ D  + E      +A LSSLE L LSGNNF SLP+ + Q+SQL  + L+
Sbjct: 786 SGLGSLKELNLRDCNISEGADLSHLAILSSLEYLDLSGNNFISLPSSMSQLSQLVSLKLQ 845

Query: 713 DFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           +   LQ+L ELP  +K +   +C  L+++
Sbjct: 846 NCRRLQALSELPSSIKEIDAHNCMSLETI 874



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 240/540 (44%), Gaps = 73/540 (13%)

Query: 547  LGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
            L C +++   + ++ ++ LK +  S    + E P+ F  +  LE L +  C+ L  +   
Sbjct: 614  LSCSDVKQLWKGIKVLDKLKFMDLSHSKYLVETPN-FSGISNLEKLDLTGCTYLREVHPT 672

Query: 606  IGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLH 664
            +G L  L ++ L     +  +P+S+     L +   S C  +E+FP  F   L  +  L+
Sbjct: 673  LGVLGKLSFLSLRDCKMLKNIPNSICKLKSLETFIFSGCSKVENFPENFG-NLEQLKELY 731

Query: 665  ISDYAVREIPQEIAYLSSLEILYLSG----NNFESLPAIIKQMSQLRFIHLEDFNMLQSL 720
              + A+  +P  I +L  L++L  +G     +   L  + ++ S      L   + L SL
Sbjct: 732  ADETAISALPSSICHLRILQVLSFNGCKGPPSASWLTLLPRKSSNSGKFLLSPLSGLGSL 791

Query: 721  PELPLCLKYLHLIDCKM-----LQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLE 775
             EL       +L DC +     L  L +L   LE LDL+G N + SLP            
Sbjct: 792  KEL-------NLRDCNISEGADLSHLAILS-SLEYLDLSGNNFI-SLPS----------- 831

Query: 776  DCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDAS---VLEKLSKHS--PDLQ 830
                  S+ +L   + L  ++NC RLQ+L E+   ++E+DA     LE +S  S  P L+
Sbjct: 832  ------SMSQLSQLVSL-KLQNCRRLQALSELPSSIKEIDAHNCMSLETISNRSLFPSLR 884

Query: 831  WAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSEL 890
                          F  CLK+    NN     S+L+     + + +       N +   +
Sbjct: 885  HV-----------SFGECLKIKTYQNN---IGSMLQALATFLQTHKRSRYARDNPESVTI 930

Query: 891  RGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAV--LDSKKVDSDCFR 948
              S +V PGSEIPDWFS QSSG+ + I+LPP+    N +GFA  AV   D     +   +
Sbjct: 931  EFSTVV-PGSEIPDWFSYQSSGNVVNIELPPNWFNSNFLGFALSAVFGFDPLPDYNPNHK 989

Query: 949  YFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIA 1008
             F +   F  +    S   +V   YNS     LI+SD + LG+ P ++       +H  A
Sbjct: 990  VFCLFCIFSFQNSAASYRDNV-FHYNSG--PALIESDHLWLGYAPVVSSFKWHEVNHFKA 1046

Query: 1009 TFKFFAERKFYKIKRCGLCPVYANPSETKDNTFTINFATEVWKLDDLPSASGTLDVEELE 1068
             F+ +   + + +KRCG+  VY++   + +N   I + +        P    TL +E+++
Sbjct: 1047 AFQIYG--RHFVVKRCGIHLVYSSEDVSDNNPTMIQYISPP------PPPRSTLLIEDID 1098


>gi|359493250|ref|XP_002268462.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1439

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 368/1133 (32%), Positives = 536/1133 (47%), Gaps = 239/1133 (21%)

Query: 1    MDS-SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHL-- 57
            MDS S+ V++VGI+G+GGIGKTT+AK ++++ S +F  + F+++ + +S++ G L     
Sbjct: 385  MDSISNDVRMVGIYGLGGIGKTTIAKVLYNRISAQFMITTFIANAKEDSKSQGLLHLQKQ 444

Query: 58   -------QKQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGEL 110
                   +++   +T+ E +        H  K+R+   K+L+VLDDV+++ QL+ L G+ 
Sbjct: 445  LLHDILPRRKNFISTVDEGI--------HMIKDRLCFKKVLLVLDDVDDLNQLEALAGDH 496

Query: 111  DQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNW 170
            + FG GSRI+VTTRDK +LE    E   +Y    L  +E  E FC  AFK+NH  E+   
Sbjct: 497  NWFGPGSRIIVTTRDKHLLEVH--EVDTLYEAKKLYHKEVVELFCWNAFKQNHPKEEYET 554

Query: 171  HSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
             S  VV Y  G PL L+VLG  L  K    W   LH L      EI  +   LK S+++L
Sbjct: 555  VSNFVVHYVNGLPLGLKVLGCFLYGKTIRQWESELHKLEWEPNQEIQCV---LKRSYDEL 611

Query: 231  TPRVKSIFLDIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDI 286
                + IFLD+ACFF GEDKD V  IL+     +ES  + +L DK L+SI  N + MHD+
Sbjct: 612  DC-TQHIFLDVACFFNGEDKDSVTRILEACKFYAESG-MRVLGDKCLISIVDNKIWMHDL 669

Query: 287  LQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR 346
            LQ+MG+ IV QE  +EPGK SRLW P         + GT+AI+GI L+LS  K I++   
Sbjct: 670  LQQMGQHIVGQEFPEEPGKWSRLWFP---------DVGTEAIKGILLNLSIPKPIHVTTE 720

Query: 347  AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
            +F  M NL L K Y    YE   +          +SKV+L    ++   +LRYL+W  YP
Sbjct: 721  SFAMMKNLSLLKIYSD--YEFASMRE--------HSKVKLSKDFEFSSYELRYLYWQGYP 770

Query: 407  LRTLPSNFKPKNLVELNLRCSKVEQPWEGE------------------------------ 436
            L +LPS+F  ++LVEL++  S ++Q WE +                              
Sbjct: 771  LESLPSSFYAEDLVELDMCYSSLKQLWESDMLLEKLNTIRLSCCQHLIEIPDISVSAPNL 830

Query: 437  -----KAC-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIE 486
                   C     V  SI     L  L+ K C+ LRSF S ++      +N S C  L +
Sbjct: 831  EKLTLDGCSSLVKVHPSIGKLSKLILLNLKNCKKLRSFLSIINMEALEILNLSDCSELKK 890

Query: 487  FPQISGKVTRL---YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVT 543
            FP I G +  L   YL  +AIEE+PSS+E LT L +LDL+ CK LK + TS CKL SL  
Sbjct: 891  FPDIQGNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLESLEY 950

Query: 544  LILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE-------------------- 583
            L   GC  LE+FPE++E ME+LK +  D T I  LPSS +                    
Sbjct: 951  LFPSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLP 1010

Query: 584  ----NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
                 L  LE L V  CS+L+NLP N+GSL++L    A  +AI+Q P S+ L   L+ L 
Sbjct: 1011 KGMCTLTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLI 1070

Query: 640  SSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL--P 697
               CK                          R  P  +  L S  +L+ +G+N  SL  P
Sbjct: 1071 YPGCK--------------------------RLAPTSLGSLFSFWLLHRNGSNGISLRLP 1104

Query: 698  AIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC----LESLDL 753
            +               F+   S   L L        DCK+++       C    L+ LDL
Sbjct: 1105 S--------------GFSCFMSFTNLDLS-------DCKLIEGAIPNSICSLISLKKLDL 1143

Query: 754  TGCNMLRS---LPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
            +  + L +   + EL   L+ L L     L  +P+LP  ++ +   NC  L  LP     
Sbjct: 1144 SRNDFLSTPAGISELT-SLKDLRLGQYQSLTEIPKLPPSVRDIHPHNCTAL--LP----- 1195

Query: 811  LQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKA--NNKILADSLLRIR 868
                                  P SL+        TN + + G    +  I+  S   + 
Sbjct: 1196 ---------------------GPSSLR--------TNPVVIRGMKYKDFHIIVSSTASVS 1226

Query: 869  HMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNL 928
             +  + + +       +KL E     IV PGS IP+W  +QS GSSI I+LP      + 
Sbjct: 1227 SLTTSPVLM-------QKLFENIAFSIVFPGSGIPEWIWHQSVGSSIKIELPTDWYNDDF 1279

Query: 929  IGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVI 988
            +GFA C+VL+       C     V +  DL+          D G++  +  + + S+ V 
Sbjct: 1280 LGFALCSVLEQLPERIICHLNSDVFYYGDLK----------DFGHDFHWKGNHVGSEHVW 1329

Query: 989  LGFKPCLNVGF-----PDGYHHTIATFKFFAERKFYK-----IKRCGLCPVYA 1031
            LG +PC  +       P+ ++H   +F+  A  +F       +K+CG+C +Y 
Sbjct: 1330 LGHQPCSQLRLFQFNDPNDWNHIEISFE--AAHRFNSSASNVVKKCGVCLIYT 1380


>gi|359495285|ref|XP_002276740.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1557

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 306/785 (38%), Positives = 422/785 (53%), Gaps = 102/785 (12%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S+ V++VGI+G GGIGKTT+AK ++++   +F  + F+++VR +S++ G L +LQKQ+L 
Sbjct: 417  SNDVRMVGIYGFGGIGKTTMAKVLYNRIGAQFMIASFIANVREDSKSRG-LLYLQKQLLH 475

Query: 64   TTLSEKLEVAGPNIP---HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
              L  +      N+    H  K+R+   K+L+VLDDV+++ QL+ L G+   FG GSRI+
Sbjct: 476  DILPRRKNFI-RNVDEGVHMIKDRLCFKKVLLVLDDVDDLNQLEALAGDHSWFGPGSRII 534

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            VTTRDK +LE   G +  +Y    L+ +EA E FC  AFK+NH  ED    S SVV Y  
Sbjct: 535  VTTRDKHLLE-LHGMDA-LYEAKKLDHKEAIELFCWNAFKQNHPKEDYETLSNSVVHYVN 592

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            G PL L++LG  L  K    W   L  L R    EI  +   LK S+++L    + IFLD
Sbjct: 593  GLPLGLKILGCFLYGKTVRQWESELQKLQREPNQEIQRV---LKRSYDELDDTQQQIFLD 649

Query: 241  IACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
            IACFF GE+KDFV  ILD     +ES +  +L DK  V+I  N + MHD+LQ+MGR+IVR
Sbjct: 650  IACFFNGEEKDFVTRILDACNFYAESGI-GVLGDKCFVTILDNKIWMHDLLQQMGREIVR 708

Query: 297  QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
            QE  ++PGK SRL  P+ ++RVL    GT AIEGI L+LS++  I++   AF  M NLRL
Sbjct: 709  QECPRDPGKWSRLCYPEVVNRVLTRKMGTKAIEGILLNLSRLTRIHITTEAFAMMKNLRL 768

Query: 357  FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
             K +         L S ST E    +KV+L    ++   +LRYLHW  YPL +LP  F  
Sbjct: 769  LKIHW-------DLESASTRED---NKVKLSKDFEFPSHELRYLHWHGYPLESLPLGFYA 818

Query: 417  KNLVELNLRCSKVEQPWEGE----------KAC------VPSSIQNFKYLSALSFKGCQS 460
            ++LVEL++  S +++ WEG+           +C      +P    +   L  L   GC S
Sbjct: 819  EDLVELDMCYSSLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDITVSAPNLEKLILDGCSS 878

Query: 461  LRS------------------------FPSNLHFVCPVTINFSYCVNLIEFPQISGKVT- 495
            L                          FPS +       +NFS C  L +FP I G +  
Sbjct: 879  LLEVHPSIGKLNKLILLNLKNCKKLICFPSIIDMKALEILNFSGCSGLKKFPNIQGNMEN 938

Query: 496  --RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
               LYL  +AIEE+PSSI  LT L +LDL+ CK LK + TS CKL+SL  L L GC  LE
Sbjct: 939  LLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSGCSQLE 998

Query: 554  HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
             FPE+ E M++LK +  D TPI  LPSS E L GL +L +  C  L +L + I +   L 
Sbjct: 999  SFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLLSLSNGISNGIGL- 1057

Query: 614  YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
                      +LPSS +    L +LD S CK +E                         I
Sbjct: 1058 ----------RLPSSFSSFRSLSNLDISDCKLIEG-----------------------AI 1084

Query: 674  PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI 733
            P  I  L SL+ L LS NNF S+PA I +++ L+ + L     L  +PELP  ++ +   
Sbjct: 1085 PNGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLAQCQSLTGIPELPPSVRDIDAH 1144

Query: 734  DCKML 738
            +C  L
Sbjct: 1145 NCTSL 1149


>gi|297807789|ref|XP_002871778.1| hypothetical protein ARALYDRAFT_488633 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317615|gb|EFH48037.1| hypothetical protein ARALYDRAFT_488633 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1281

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 295/879 (33%), Positives = 433/879 (49%), Gaps = 157/879 (17%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V++VGIWGMGG+GKTT+AK +++Q S  F+  CF+ +V+      G +  LQ++ L    
Sbjct: 208  VRMVGIWGMGGVGKTTIAKYLYNQLSGRFQAHCFMENVKEVCNRYG-VRRLQEEFLCRMF 266

Query: 67   SEKLEVAGPNIP--HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
             E+ + A  ++      +ER R  ++LIVLDDV+   QL  L+ E+D FG GSRI+VTTR
Sbjct: 267  RERHKEAWGSVSCCSMIRERFRHKRVLIVLDDVDRSEQLNELVKEIDWFGPGSRIIVTTR 326

Query: 125  DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKEN-HCPEDLNWHSRSVVSYTKGNP 183
            D+ +L         +Y+V  L   EA + FCN+AF+E    P      S   ++Y  G P
Sbjct: 327  DRHLL--LSHGIDLVYKVKCLPKREALQLFCNYAFREEIRIPHGFQELSVQAINYASGLP 384

Query: 184  LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
            L L VLGS L  + +  W   L  L     S   DI ++L++S++ L  + K+IFL I+C
Sbjct: 385  LALRVLGSFLYRRSQREWESTLARLKTYPHS---DIMEVLRVSYDGLDEQEKAIFLYISC 441

Query: 244  FFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
            F+  +  D+V  +LD    +    + IL +KSL+ +S   + MHD+L++MGR+IVRQ++ 
Sbjct: 442  FYNMKHVDYVTKLLDICGFAAEIGITILTEKSLIFVSNGNIKMHDLLEQMGREIVRQQAV 501

Query: 301  KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
              P +R  +WDP++I  +L  N GT  +EGI L+LS+I  +    RAF  +SNL+L  FY
Sbjct: 502  NNPAQRLLVWDPEDICDLLSENSGTQLVEGISLNLSEISEVFASDRAFEGLSNLKLLNFY 561

Query: 361  VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
               F                 ++V LPNGL YLP+KLRYL WD YPL+T+PS F P+ LV
Sbjct: 562  DLSFD--------------GETRVHLPNGLSYLPRKLRYLRWDGYPLKTMPSRFCPEFLV 607

Query: 421  ELNLRCSKVEQPWEG------------------------EKAC---------------VP 441
            EL +  S +E+ W+G                         KA                V 
Sbjct: 608  ELCMSNSDLEKLWDGIQPLTNLKKMDLSRCKYLVEIPDLSKATNLEELNLSYCQSLVEVT 667

Query: 442  SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ 501
             SI+N K LS      C  L++ P  +      T+  S C +L+ FP+IS    RLYL  
Sbjct: 668  PSIKNLKGLSCFYMTNCIQLKNIPIGITLKSLETVRMSGCSSLMHFPEISWNTRRLYLSS 727

Query: 502  SAIEEVPSSI---ECLTDLEV---------------------LDLRGCKRLKRISTSFCK 537
            + IEE+PSSI    CL +L++                     L+L GCKRL+ +  +   
Sbjct: 728  TKIEELPSSISRLSCLVELDMSDCQRLRTLPSYLRHLVSLKSLNLDGCKRLENLPGTLQN 787

Query: 538  LRSLVTLILLGCLNLEHFPEILEKMEHLK-----------RI----------YSDRTPIT 576
            L SL TL + GCLN+  FP +   +E L+           RI           S+   + 
Sbjct: 788  LTSLETLEVSGCLNVNEFPRVATNIEVLRISETSIEEIPARICNLSQLRSLDISENKRLK 847

Query: 577  ELPSSFENLPGLEVLFVEDCSKLDN------------------------LPDNIGSLEYL 612
             LP S   L  LE L +  CS L++                        LP+NIG+L  L
Sbjct: 848  SLPLSISKLRSLEKLKLSGCSVLESFPPEICQTMSCLRWFDLDRTSIKELPENIGNLVAL 907

Query: 613  YYILAAASAISQLPSSVALSNMLRSLD------------SSHCKGLESFPRTFLLGLSAM 660
              + A+ + I + P S+A    L+ L              S C  L  F     L LS M
Sbjct: 908  EVLQASRTVIRRAPRSIARLTRLQVLAIGNSLYTPEGLLHSLCPPLARFDDLRALSLSNM 967

Query: 661  GLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSL 720
             ++        EIP  I  L +L  + LSGN+FE +PA IK++++L  ++L +   LQ+L
Sbjct: 968  NMV--------EIPNSIGNLWNLLEIDLSGNSFEFIPASIKRLTRLNRLNLNNCQRLQAL 1019

Query: 721  P-ELPLCLKYLHLIDCKMLQSLPVL--PFCLESLDLTGC 756
            P ELP  L Y+++ +C  L S+      +CL     + C
Sbjct: 1020 PDELPRGLLYIYIHNCTSLVSISGCFNQYCLRQFVASNC 1058


>gi|225460354|ref|XP_002263146.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1174

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 323/1008 (32%), Positives = 500/1008 (49%), Gaps = 151/1008 (14%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEF-EGSCFVSDVRGNSETAGGLEHLQKQMLSTT 65
            V++VGIWGM GIGK+T+A  ++++   +F EG CF+ +VR  S+  G L +LQ+++LS  
Sbjct: 218  VRMVGIWGMAGIGKSTIAYQVYNKIYAQFDEGYCFLPNVREESQRHG-LAYLQEELLSQI 276

Query: 66   LSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
                L     N   +F KER+   K+LIVLDDV+   QL+ L G  D FG GSRI++TT+
Sbjct: 277  SGGNLNKGNFNRGINFIKERLHSRKVLIVLDDVDMYEQLEVLAGNHDWFGAGSRIIITTK 336

Query: 125  DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
            DK +L    G +  IY V GL++ EA + FC  AFK +    D     ++ V Y +G PL
Sbjct: 337  DKTLLN-MHGVDA-IYNVEGLKYNEALKLFCWCAFKHDLPTADYMQLCKNFVKYIEGLPL 394

Query: 185  VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
             ++VLGS +  K    W   L  L RI      D+  +L+ISF+ L    K IFLDIACF
Sbjct: 395  AIKVLGSFVKNKTIDEWKSALDKLKRIPHK---DVQKVLRISFDGLDDNQKDIFLDIACF 451

Query: 245  FEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
            F+G+DKDFVA IL+  +   ++ + +L + SL+ +S N L MH++LQEMG +IVRQE+ K
Sbjct: 452  FKGQDKDFVAKILESCDFFPANDIRVLEENSLILVSNNKLCMHNLLQEMGWEIVRQENVK 511

Query: 302  EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
             PGKRSRLW   E++ VL  N GT+A+EG+ LDLS  K ++    AFT M+ LR+ +FY 
Sbjct: 512  YPGKRSRLWFHDEVNHVLTTNTGTEAVEGLVLDLSASKELHFSAGAFTEMNRLRVLRFY- 570

Query: 362  PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVE 421
                                  V++   L +L   LR L+W  YPL++LPSNF PK LVE
Sbjct: 571  ---------------------NVKMNGNLKFLSNNLRSLYWHEYPLKSLPSNFHPKKLVE 609

Query: 422  LNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC 481
            LN+  S++EQ W+G+K     S +  K+                          I  S+ 
Sbjct: 610  LNMCSSRLEQLWKGDK-----SFEKLKF--------------------------IKLSHS 638

Query: 482  VNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSL 541
              L   P  SG                       +LE L L GC  + ++  S   L+ L
Sbjct: 639  QYLTRTPDFSGA---------------------PNLERLILEGCTSMVKVHPSIGALQKL 677

Query: 542  VTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDN 601
            + L L GC NL+ F                        +S  ++  L++L +  CSKL  
Sbjct: 678  IFLNLEGCKNLKSF------------------------ASSIHMNSLQILTLSGCSKLKK 713

Query: 602  LPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMG 661
             P+ + +++ L  +L   +A+ +LPSS+   N L  L+ ++CK L S P++ L  L+++ 
Sbjct: 714  FPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQS-LCKLTSLQ 772

Query: 662  LLHISDYA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL---EDFNML 717
            +L ++  + ++++P E+  L  L  L   G+  + +P  I  ++ L+ + L   +  N++
Sbjct: 773  ILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAGCKKRNVV 832

Query: 718  QSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDC 777
             SL   P          C  L+SL  L   +++L L+ CN+        L          
Sbjct: 833  FSLWSSPTV--------CLQLRSLLNLS-SVKTLSLSDCNLSEGALPSDLSSLSSLESLD 883

Query: 778  NMLRSLPELPLCLQ------LLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQW 831
                +   +P  L        L++ +C  LQS+PE+   +Q++ A        H P L+ 
Sbjct: 884  LSKNNFITIPASLNRLSQLLYLSLSHCKSLQSVPELPSTIQKVYAD-------HCPSLET 936

Query: 832  ----APESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKL 887
                A  S K   + F F++C +L    ++  +   L  I+   +AS    +  A     
Sbjct: 937  FSLSACASRKLNQLNFTFSDCFRLVENEHSDTVGAILQGIQ---LASSIPKFVDANKGSP 993

Query: 888  SELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCF 947
                   +++PGS IP+WF +Q+ GSS+ ++LPPH     L+G A CAV  +  +D    
Sbjct: 994  VPYNDFHVIVPGSSIPEWFIHQNMGSSVTVELPPHWYNAKLMGLAVCAVFHADPIDWGYL 1053

Query: 948  RY--FYVSFQFD-LEIKTLSETK--HVDLGYNSRYIEDLIDSDRVILG 990
            +Y  +    ++D   ++T S  K  HV  GY S   +   + DR+  G
Sbjct: 1054 QYSLYRGEHKYDSYMLQTWSPMKGDHVWFGYQSLVGQ---EDDRMWFG 1098


>gi|9759045|dbj|BAB09567.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1295

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 323/995 (32%), Positives = 490/995 (49%), Gaps = 141/995 (14%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V+++GIWGMGG+GKTT+AK +++Q S +F+  CF+ +V+      G +  LQ + L    
Sbjct: 207  VRMLGIWGMGGVGKTTIAKYLYNQLSGQFQVHCFMENVKEVCNRYG-VRRLQVEFLCRMF 265

Query: 67   SEKLEVAGPNIP--HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
             E+ + A  ++   +  KER R   + IVLDDV+   QL  L+ E   FG GSRI+VTTR
Sbjct: 266  QERDKEAWSSVSCCNIIKERFRHKMVFIVLDDVDRSEQLNELVKETGWFGPGSRIIVTTR 325

Query: 125  DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHC-PEDLNWHSRSVVSYTKGNP 183
            D+ +L         +Y+V  L  +EA + FCN+AF+E    P      S   V+Y  G P
Sbjct: 326  DRHLL--LSHGINLVYKVKCLPKKEALQLFCNYAFREEIILPHGFEELSVQAVNYASGLP 383

Query: 184  LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
            L L VLGS L  + +  W   L  L     S   DI ++L++S++ L  + K+IFL I+C
Sbjct: 384  LALRVLGSFLYRRSQIEWESTLARLKTYPHS---DIMEVLRVSYDGLDEQEKAIFLYISC 440

Query: 244  FFEGEDKDFVASILD---DSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
            F+  +  D+V  +LD    +    + IL +KSL+  S   + +HD+L++MGR++VRQ++ 
Sbjct: 441  FYNMKQVDYVRKLLDLCGYAAEIGITILTEKSLIVESNGCVKIHDLLEQMGRELVRQQAV 500

Query: 301  KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
              P +R  LWDP++I  +L  N GT  +EGI L+LS+I  +    RAF  +SNL+L  FY
Sbjct: 501  NNPAQRLLLWDPEDICHLLSENSGTQLVEGISLNLSEISEVFASDRAFEGLSNLKLLNFY 560

Query: 361  VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
               F                 ++V LPNGL YLP+KLRYL WD YPL+T+PS F P+ LV
Sbjct: 561  DLSFD--------------GETRVHLPNGLSYLPRKLRYLRWDGYPLKTMPSRFFPEFLV 606

Query: 421  ELNLRCSKVEQPWEG------------------------EKAC---------------VP 441
            EL +  S +E+ W+G                         KA                V 
Sbjct: 607  ELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVPDLSKATNLEELNLSYCQSLVEVT 666

Query: 442  SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ 501
             SI+N K LS      C  L+  P  +      T+  S C +L  FP+IS    RLYL  
Sbjct: 667  PSIKNLKGLSCFYLTNCIQLKDIPIGIILKSLETVGMSGCSSLKHFPEISWNTRRLYLSS 726

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            + IEE+PSSI  L+ L  LD+  C+RL+ + +    L SL +L L GC  LE+ P+ L+ 
Sbjct: 727  TKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQN 786

Query: 562  MEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAA 619
            +  L+ +  S    + E P    ++   EVL + + S ++ +P  I +L  L  + ++  
Sbjct: 787  LTSLETLEVSGCLNVNEFPRVSTSI---EVLRISETS-IEEIPARICNLSQLRSLDISEN 842

Query: 620  SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
              ++ LP S++    L  L  S C  LESFP      +S +    +   +++E+P+ I  
Sbjct: 843  KRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGN 902

Query: 680  LSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDF-----NMLQSL-PELPLC--LKYLH 731
            L +LE+L  S       P  I ++++L+ + + +       +L SL P L     L+ L 
Sbjct: 903  LVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALS 962

Query: 732  LIDCKMLQ---SLPVLPFCLESLDLTGCN---MLRSLPELPLCLQYLNLEDCNMLRSLP- 784
            L +  M +   S+  L   LE LDL+G N   +  S+  L   L  LNL +C  L++LP 
Sbjct: 963  LSNMNMTEIPNSIGNLWNLLE-LDLSGNNFEFIPASIKRLTR-LNRLNLNNCQRLQALPD 1020

Query: 785  ELPLCLQLLTVRNCNRLQSLPEIL--LCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC 842
            ELP  L  + + +C  L S+       CL++L AS                         
Sbjct: 1021 ELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVAS------------------------- 1055

Query: 843  FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEI 902
                NC KL+  A  +IL                    +  N KL   +      PGS+I
Sbjct: 1056 ----NCYKLDQAA--QIL--------------------IHRNLKLESAKPEHSYFPGSDI 1089

Query: 903  PDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
            P  F++Q  G S+ IQLP   S  +++GF+ C ++
Sbjct: 1090 PTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMI 1124


>gi|15238008|ref|NP_197270.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
 gi|332005072|gb|AED92455.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
          Length = 1294

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 323/995 (32%), Positives = 490/995 (49%), Gaps = 141/995 (14%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V+++GIWGMGG+GKTT+AK +++Q S +F+  CF+ +V+      G +  LQ + L    
Sbjct: 206  VRMLGIWGMGGVGKTTIAKYLYNQLSGQFQVHCFMENVKEVCNRYG-VRRLQVEFLCRMF 264

Query: 67   SEKLEVAGPNIP--HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
             E+ + A  ++   +  KER R   + IVLDDV+   QL  L+ E   FG GSRI+VTTR
Sbjct: 265  QERDKEAWSSVSCCNIIKERFRHKMVFIVLDDVDRSEQLNELVKETGWFGPGSRIIVTTR 324

Query: 125  DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHC-PEDLNWHSRSVVSYTKGNP 183
            D+ +L         +Y+V  L  +EA + FCN+AF+E    P      S   V+Y  G P
Sbjct: 325  DRHLL--LSHGINLVYKVKCLPKKEALQLFCNYAFREEIILPHGFEELSVQAVNYASGLP 382

Query: 184  LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
            L L VLGS L  + +  W   L  L     S   DI ++L++S++ L  + K+IFL I+C
Sbjct: 383  LALRVLGSFLYRRSQIEWESTLARLKTYPHS---DIMEVLRVSYDGLDEQEKAIFLYISC 439

Query: 244  FFEGEDKDFVASILD---DSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
            F+  +  D+V  +LD    +    + IL +KSL+  S   + +HD+L++MGR++VRQ++ 
Sbjct: 440  FYNMKQVDYVRKLLDLCGYAAEIGITILTEKSLIVESNGCVKIHDLLEQMGRELVRQQAV 499

Query: 301  KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
              P +R  LWDP++I  +L  N GT  +EGI L+LS+I  +    RAF  +SNL+L  FY
Sbjct: 500  NNPAQRLLLWDPEDICHLLSENSGTQLVEGISLNLSEISEVFASDRAFEGLSNLKLLNFY 559

Query: 361  VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
               F                 ++V LPNGL YLP+KLRYL WD YPL+T+PS F P+ LV
Sbjct: 560  DLSFD--------------GETRVHLPNGLSYLPRKLRYLRWDGYPLKTMPSRFFPEFLV 605

Query: 421  ELNLRCSKVEQPWEG------------------------EKAC---------------VP 441
            EL +  S +E+ W+G                         KA                V 
Sbjct: 606  ELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVPDLSKATNLEELNLSYCQSLVEVT 665

Query: 442  SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ 501
             SI+N K LS      C  L+  P  +      T+  S C +L  FP+IS    RLYL  
Sbjct: 666  PSIKNLKGLSCFYLTNCIQLKDIPIGIILKSLETVGMSGCSSLKHFPEISWNTRRLYLSS 725

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            + IEE+PSSI  L+ L  LD+  C+RL+ + +    L SL +L L GC  LE+ P+ L+ 
Sbjct: 726  TKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQN 785

Query: 562  MEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAA 619
            +  L+ +  S    + E P    ++   EVL + + S ++ +P  I +L  L  + ++  
Sbjct: 786  LTSLETLEVSGCLNVNEFPRVSTSI---EVLRISETS-IEEIPARICNLSQLRSLDISEN 841

Query: 620  SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
              ++ LP S++    L  L  S C  LESFP      +S +    +   +++E+P+ I  
Sbjct: 842  KRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGN 901

Query: 680  LSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDF-----NMLQSL-PELPLC--LKYLH 731
            L +LE+L  S       P  I ++++L+ + + +       +L SL P L     L+ L 
Sbjct: 902  LVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALS 961

Query: 732  LIDCKMLQ---SLPVLPFCLESLDLTGCN---MLRSLPELPLCLQYLNLEDCNMLRSLP- 784
            L +  M +   S+  L   LE LDL+G N   +  S+  L   L  LNL +C  L++LP 
Sbjct: 962  LSNMNMTEIPNSIGNLWNLLE-LDLSGNNFEFIPASIKRLTR-LNRLNLNNCQRLQALPD 1019

Query: 785  ELPLCLQLLTVRNCNRLQSLPEIL--LCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC 842
            ELP  L  + + +C  L S+       CL++L AS                         
Sbjct: 1020 ELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVAS------------------------- 1054

Query: 843  FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEI 902
                NC KL+  A  +IL                    +  N KL   +      PGS+I
Sbjct: 1055 ----NCYKLDQAA--QIL--------------------IHRNLKLESAKPEHSYFPGSDI 1088

Query: 903  PDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
            P  F++Q  G S+ IQLP   S  +++GF+ C ++
Sbjct: 1089 PTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMI 1123


>gi|227438275|gb|ACP30627.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1226

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 343/1076 (31%), Positives = 512/1076 (47%), Gaps = 169/1076 (15%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
             + +  V+IVG+ GM GIGKTT+A  ++ Q  + F+G CF+++V+ N     GL+HLQ++
Sbjct: 206  FEETSCVRIVGVLGMAGIGKTTVADCVYKQNYNRFDGYCFLANVQ-NESKLHGLDHLQRK 264

Query: 61   MLSTTLSE-KLEVAGPNIPHFT-KERVRRMKLLIVLDDVNEVGQLKRLIGELDQ--FGQG 116
            +L   L E  L+V  P   H   K+R+   KL IVLDDV    QL+ LIG   +  + +G
Sbjct: 265  LLRKLLDEDNLDVGAPEGAHDAFKDRLGNKKLFIVLDDVANENQLRNLIGGAGKELYREG 324

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHC--PEDLNWHSRS 174
            +RIV+TT +K++LEK   E   + R++G    E+ E FC  AF  N C  PE ++  S  
Sbjct: 325  TRIVITTSNKKLLEKVVNETYVVPRLSG---RESLELFCLSAFSSNLCATPELMDL-SNK 380

Query: 175  VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
             V Y+KG+PL L++LGS LC + KS+W      L R  + +IHD+   LK+ + +L    
Sbjct: 381  FVDYSKGHPLALKLLGSDLCQRDKSYWKLKWERLQRRPDGKIHDV---LKVCYEELCEEE 437

Query: 235  KSIFLDIACFFEGEDKDFVASILDDSESD---VLDILIDKSLVSISGNFLNMHDILQEMG 291
            +SIFLD+ACFF  E  DFV+S+L    +D   ++  LIDK L+++S N L MHD+L  MG
Sbjct: 438  QSIFLDVACFFRSEKLDFVSSVLSTHHTDASTLISDLIDKCLITVSDNRLEMHDLLLTMG 497

Query: 292  RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
            R++  + S KE G R RLW+ ++I RVLK+  GT  I GIFLD+S +  + L    F  M
Sbjct: 498  REVGYESSIKEAGNRGRLWNQEDICRVLKYKTGTAEIRGIFLDMSNVDSMKLSADIFARM 557

Query: 352  SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
             NL+  KFY           S  ++   +  +++ P GLD  P +L YLHW  YPL  LP
Sbjct: 558  WNLKFLKFY----------NSHCSKWCENDCRLRFPKGLDCFPDELVYLHWQGYPLEYLP 607

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
            SNF PK LV LNLR S + Q  E EK                       LR         
Sbjct: 608  SNFNPKKLVYLNLRYSNIMQLCEDEK-------------------NTGELR--------- 639

Query: 472  CPVTINFSYCVNLIEFPQI--SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
                ++ SY   L+    +  + K+ RL L         S+I  +  L  L+LR C  LK
Sbjct: 640  ---WVDLSYSKELMNLTGLLEARKLERLNLENCTSLTKCSAIRQMDSLVSLNLRDCINLK 696

Query: 530  RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
             +      L+SL  +IL GC  L+ FP I E +E L   Y D T +  +P S ENL  L 
Sbjct: 697  SLPKRI-SLKSLKFVILSGCSKLKKFPTISENIESL---YLDGTAVKRVPESIENLQKLT 752

Query: 590  VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            VL ++ CS+L                         LP+++     L+ L  S C  LESF
Sbjct: 753  VLNLKKCSRL-----------------------MHLPTTLCKLKSLKELLLSGCSKLESF 789

Query: 650  PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAI----IKQMSQ 705
            P      + ++ +L + D A+++ P+++  +S+L++    G+    L  +        S+
Sbjct: 790  P-DINEDMESLEILLMDDTAIKQTPRKMD-MSNLKLFSFGGSKVHDLTCLELLPFSGCSR 847

Query: 706  LRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPEL 765
            L  ++L D N+ + LP+   CL  L  + C    ++  LP  ++ L              
Sbjct: 848  LSDMYLTDCNLYK-LPDSFSCLSLLQTL-CLSRNNIKNLPGSIKKLHH------------ 893

Query: 766  PLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSL--PEILLCLQELDASVLEKLS 823
               L+ L L+ C  L SLP LP  LQ L    C  L+++  P  LL + E + S      
Sbjct: 894  ---LKSLYLKHCQQLVSLPVLPSNLQYLDAHGCISLETVAKPMTLLVVAERNQST----- 945

Query: 824  KHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAI 883
                               F FT+C KLN  A   I+A + L+ + +   SL+  ++  +
Sbjct: 946  -------------------FVFTDCFKLNRDAQESIVAHTQLKSQILGNGSLQRNHKGLV 986

Query: 884  NEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVD 943
            +E L+         PG+++P WF +Q  GSS+   LPPH      IG + C V+  K   
Sbjct: 987  SEPLAS-----ASFPGNDLPLWFRHQRMGSSMETHLPPHWCDDKFIGLSLCVVVSFKDYV 1041

Query: 944  SDCFRYFYV-----------SFQFDLEIKTLSETKHVDLGYNSRYIED--LIDSDRVILG 990
                R+  +              F   +    E      G +S   E+   + SD V + 
Sbjct: 1042 DKTNRFSVICKCKFRNEDGDCISFTCNLGGWKE----QCGSSSSREEEPRKLTSDHVFIS 1097

Query: 991  FKPCLNVGFPDGYH---HTIATFKFFAERKFYKIK-------RCGLCPVYANPSET 1036
            +  C +       +   +T A+FKFF      K K       +CG+  +YA P E 
Sbjct: 1098 YNNCFHAKKSHDLNRCCNTTASFKFFVTDGVSKRKLDCCEVVKCGMSLLYA-PDEN 1152


>gi|359493496|ref|XP_003634615.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1180

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 305/785 (38%), Positives = 432/785 (55%), Gaps = 84/785 (10%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            SD V+ VGIWGM GIGKTT+A+AI+D+   +F+G CF+ +VR +S+  G L +LQ+ +L
Sbjct: 212 GSDDVRFVGIWGMAGIGKTTIAEAIYDRIYTKFDGCCFLKNVREDSQRHG-LTYLQETLL 270

Query: 63  STTLSEKLEV-AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
           S  L     +  G N   F K R+R  ++LIVLDDV    QL+ L G  D FG GSRI++
Sbjct: 271 SQVLGGINNLNRGIN---FIKARLRPKRVLIVLDDVVHRQQLEALAGNHDWFGSGSRIII 327

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTR+KR+L     E  +IY+V  LE++EA + FC +AF+  H  ED        V YT G
Sbjct: 328 TTREKRLL--IEQEVDEIYKVEKLEYDEALKLFCQYAFRYKHPTEDFMQLCHHAVDYTGG 385

Query: 182 NPLVLEVLGSSLCLKRKS--HWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            PL L+VLGS  CL RKS   W   L  LN+    E+    ++LK SF+ L    K++FL
Sbjct: 386 LPLALKVLGS--CLYRKSIHEWKSELDKLNQFPNKEV---LNVLKTSFDGLDDNEKNMFL 440

Query: 240 DIACFFEGEDKDFVASILDD--SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
           DIA F++GEDKDFV  +LD+    S++ + L+DKSL++IS N L MHD+LQEMG +IVRQ
Sbjct: 441 DIAFFYKGEDKDFVIEVLDNFFPVSEIGN-LVDKSLITISDNKLYMHDLLQEMGWEIVRQ 499

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
           ES K+PGKRSRL   ++I  VL  NKGT+A+EG+  DLS  K +NL   AF  M+ LRL 
Sbjct: 500 ESIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFDLSASKELNLSVDAFAKMNKLRLL 559

Query: 358 KFYVPKFYEIEKLPS-----MSTEEQLSY----------SKVQLPNGLDYLPKKLRYLHW 402
           +FY  +FY   +  S      ST +   +          SK+ L     +    LR LHW
Sbjct: 560 RFYNCQFYGSSEYLSEEELIASTRDAWRWMGYDNSPYNDSKLHLSRDFKFPSNNLRSLHW 619

Query: 403 DTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALS-------- 454
             YPL++LPS F PK LVELN+  S ++Q WEG+KA          +   L+        
Sbjct: 620 HGYPLKSLPSIFHPKKLVELNMCYSLLKQLWEGKKAFEKLKFIKLSHSQHLTKTPDFSAA 679

Query: 455 -------FKGCQSL-RSFPSNLHFVCPVTINFSYCVNLIEFPQISG----KVTRLYLGQS 502
                    GC SL +  PS       + +N   C  L +FP++       ++ + L  +
Sbjct: 680 PKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGT 739

Query: 503 AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM 562
           AI E+PSSI  L  L +L+LR CK+L  +  S C+L SL TL L GC  L+  P+ L ++
Sbjct: 740 AIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRL 799

Query: 563 EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAI 622
           + L  ++ D T I E+PSS   L  L+ L +  C   ++   N+            A + 
Sbjct: 800 QCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWESKSWNL------------AFSF 847

Query: 623 SQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE--IPQEIAYL 680
              P+   L                  PR  L GL ++ +L++SD  + E  +P +++ L
Sbjct: 848 GSWPTLEPL----------------RLPR--LSGLYSLKILNLSDCNLLEGALPIDLSSL 889

Query: 681 SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           SSLE+L LS N+F ++PA +  +S+L  + L     LQSLPELP  ++YL+   C  L++
Sbjct: 890 SSLEMLDLSRNSFITIPANLSGLSRLHVLMLPYCKSLQSLPELPSSIRYLNAEACTSLET 949

Query: 741 LPVLP 745
               P
Sbjct: 950 FSCSP 954


>gi|255555357|ref|XP_002518715.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223542096|gb|EEF43640.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1094

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 349/1051 (33%), Positives = 505/1051 (48%), Gaps = 207/1051 (19%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S  V+IVGIWGMGG+GKTTLA+AI+D+ + +FE   F+S+ R   +    L  LQ Q+ S
Sbjct: 217  SSNVRIVGIWGMGGLGKTTLARAIYDRIAPQFEICYFLSNAREQLQRCT-LSELQNQLFS 275

Query: 64   TTLSEKLEVAGPNIPH-FTKERVRRMKLLIVLDDVNEVGQLKRLI--GELDQFGQGSRIV 120
            T L E+   +  N+   F K+R+ R K+LIV+DD ++  QL+ L+   E D FG GSRI+
Sbjct: 276  TLLEEQ---STLNLQRSFIKDRLCRKKVLIVIDDADDSTQLQELLLESEPDYFGSGSRII 332

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKEN-----HCPEDLNWHSRSV 175
            +T+RDK+VL     +  KIY +  L+  EA + F   AFK++     HC       +  V
Sbjct: 333  ITSRDKQVLRNIARD--KIYAMQKLKKHEALQLFSLKAFKQDNPTCRHC----RLQAERV 386

Query: 176  VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
            V Y KGNPL L VLGS+L  KR+  W   L  L R    +I D+   L+IS++ L    +
Sbjct: 387  VKYAKGNPLALTVLGSALFGKREKDWKSALERLERNPNKKIDDV---LRISYDGLDSEER 443

Query: 236  SIFLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNF--LNMHDILQEM 290
            SIFLDIACFF G+D+DFV   LD    S   V+  LID+S++ +S +   L++HD+LQEM
Sbjct: 444  SIFLDIACFFRGQDRDFVTKTLDGYYGSAHSVISTLIDRSVIMLSSDSSKLDLHDLLQEM 503

Query: 291  GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFT 349
            GR+IV +ES K P  RSRLW P+++  VL  N+GT+AIEGI LD SK    I L P AF+
Sbjct: 504  GRKIVFEES-KNPENRSRLWTPEDVCYVLNENRGTEAIEGISLDKSKATSEIRLKPDAFS 562

Query: 350  NMSNLRLFKFYVP--KFYEIEKLPSMSTEEQLSYSKVQLP-NGLDYLPKKLRYLHWDTYP 406
             M  LR  KFY     FY        S  ++ S  K+Q+  +GL  LP +LR+L+W  +P
Sbjct: 563  RMCRLRFLKFYKSPGDFYR-------SPGDRHSKDKLQISRDGLQSLPNELRHLYWIDFP 615

Query: 407  LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS 466
            +++LP +F P+NLV L+LR SKV++ W G         QN   L  +   G + L   P 
Sbjct: 616  MKSLPPSFNPENLVVLHLRNSKVKKLWTG--------TQNLVKLKEIDLSGSKYLIGIPD 667

Query: 467  NLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCK 526
                +    I+ S C NL                    EEV SSI+ L  LE L+L  C 
Sbjct: 668  LSKAIYIEKIDLSDCDNL--------------------EEVHSSIQYLNKLEFLNLWHCN 707

Query: 527  RLKRISTSFCKLRSLVTLIL-LGCLNLEHFPEIL-EKMEHLKRIYSDRTPITELPSSFEN 584
            +L+R+     ++ S V  +L LG   ++  PE    ++E +         +T    S  N
Sbjct: 708  KLRRLPR---RIDSKVLKVLKLGSTRVKRCPEFQGNQLEDVFLYCPAIKNVTLTVLSILN 764

Query: 585  LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
               L  LFV  C +L                       S LPSS      L+SLD  HC 
Sbjct: 765  SSRLVHLFVYRCRRL-----------------------SILPSSFYKLKSLKSLDLLHCS 801

Query: 645  GLESFPRTF--LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
             LESFP     +  +  + + +  +  ++  P  I+ L SL  L L+G   + +P+ I+ 
Sbjct: 802  KLESFPEILEPMYNIFKIDMSYCRN--LKSFPNSISNLISLTYLNLAGTAIKQMPSSIEH 859

Query: 703  MSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSL 762
            +SQL F+ L+D                     CK L SLPV               +R L
Sbjct: 860  LSQLDFLDLKD---------------------CKYLDSLPV--------------SIREL 884

Query: 763  PELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKL 822
            P+L    + + L  C  L SLPELP  L+ L   NC  L                  E++
Sbjct: 885  PQL----EEMYLTSCESLHSLPELPSSLKKLRAENCKSL------------------ERV 922

Query: 823  SKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMA 882
            + +        ++L  A     F NCL+L+ K+                I  LR+  E  
Sbjct: 923  TSY--------KNLGEAT----FANCLRLDQKS--------------FQITDLRVP-ECI 955

Query: 883  INEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKV 942
              E+        ++ PGSE+P  FS+QS GSS+ +Q   +         AFC V + KK 
Sbjct: 956  YKERY-------LLYPGSEVPGCFSSQSMGSSVTMQSSLNEKL--FKDAAFCVVFEFKK- 1005

Query: 943  DSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDG 1002
             SDC         F++  +  +    +  G+       L ++D V++ +  C+++    G
Sbjct: 1006 SSDCV--------FEVRYREDNPEGRIRSGFPYSETPILTNTDHVLIWWDECIDLNNISG 1057

Query: 1003 YHHTIATFKFFAER-------KFYKIKRCGL 1026
              H+   +     +       K  K+KRCGL
Sbjct: 1058 VVHSFDFYPVTHPKTGQKEIVKHCKVKRCGL 1088


>gi|255561514|ref|XP_002521767.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223538980|gb|EEF40577.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 994

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 322/940 (34%), Positives = 461/940 (49%), Gaps = 136/940 (14%)

Query: 15  MGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL-SEKLEVA 73
           MGGIGKTT+A  IF++ S  F+  CF++DVR  SET G L HLQ+ + S  L  E L + 
Sbjct: 1   MGGIGKTTIAGVIFNRISALFDSCCFLADVRKESETTG-LPHLQEALFSMLLEDENLNMH 59

Query: 74  GPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKF 132
             +  P   K R+ R K+L+VLDDVN   QL+ L G +  +G GSRI++TTRD+ +L   
Sbjct: 60  MLSTEPSCIKTRLHRKKVLVVLDDVNSSRQLELLAG-IHWYGPGSRIIITTRDRHLLVSH 118

Query: 133 RGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSS 192
             +   +Y V  L  E A E F  +AFK+ H   +    S   + Y KG PL L+VLGSS
Sbjct: 119 AVD--FVYEVKDLNEEHALELFSRYAFKQKHRTAEFTELSIRAIDYCKGLPLALKVLGSS 176

Query: 193 LCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDF 252
           L  + ++ W      LNR+ +    DI   L+ISF+ L    KS+FLDIAC+F G+DKD+
Sbjct: 177 LYGRSENQWND---SLNRLEKHFNKDIQQTLRISFDGLAELNKSLFLDIACYFRGQDKDY 233

Query: 253 VASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSR 308
           VA +L       ES + + LID SLV++  N L MHD+LQ+MGR IVRQ+S K+PGKRSR
Sbjct: 234 VAKLLKSFGFFPESGISE-LIDHSLVTVFDNTLGMHDLLQDMGRDIVRQQSLKDPGKRSR 292

Query: 309 LWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIE 368
           LWD +++ +VL    G++ +E + +DLSK         AF  M NLRL            
Sbjct: 293 LWDHEDVVQVLMEESGSEHVECMVIDLSKTDEKKFSVEAFMKMKNLRL------------ 340

Query: 369 KLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSK 428
               +         K+ L    ++L  KL+ L W+ YPL+ LPSNF PK ++ L +  S 
Sbjct: 341 ----LDVHGAYGDRKIHLSGDFEFLYYKLKCLCWEGYPLKYLPSNFNPKKIIMLEMPQSS 396

Query: 429 VEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP 488
           +++ W G              L  L F                    I+ S+   L E P
Sbjct: 397 IKRLWGGRLE-----------LKELQF--------------------IDLSHSQYLTETP 425

Query: 489 QISGKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
             +G     T +  G +++ +V  SI  L  L +L+L+ C  L+ +  S   L SL  L+
Sbjct: 426 DFTGVPNLETLILEGCTSLSKVHPSIGVLKKLILLNLKDCNCLRSLPGSI-GLESLNVLV 484

Query: 546 LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
           L GC  LE FPEI+  M HL ++  D T I E+P SF NL GL  L + +C  L+ LP N
Sbjct: 485 LSGCSKLEKFPEIVGDMAHLSKLGLDGTAIAEVPHSFANLTGLTFLSLRNCKNLEKLPSN 544

Query: 606 IGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHI 665
           I SL+YL                       ++LD   C  L+S P + L  L  +  L +
Sbjct: 545 INSLKYL-----------------------KNLDLFGCSKLKSLPDS-LGYLECLEKLDL 580

Query: 666 SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
              +VR+ P  I  L  L++L   G    +     K +S     H      L SL  L L
Sbjct: 581 GKTSVRQPPSSIRLLKYLKVLSFHGIGPIAWQWPYKILSIFGITHDAVGLSLPSLNGL-L 639

Query: 726 CLKYLHLIDCKMLQSL-PVLPFCLESLDLTG------CNMLRSLPELPLCLQYLNLEDCN 778
            L  L L DC +   + P   + L SL++         N+  S+ +LP  L++L L+DC 
Sbjct: 640 SLTELDLSDCNLSDKMIPADFYTLSSLEVLNIGRNNFVNIPASISQLPR-LRFLYLDDCK 698

Query: 779 MLRSLPELPLCLQLLTVRNCNRLQSL--PEILLCLQELDASVLEKLSKHSPDLQWAPESL 836
            L++L +LP  +  ++  NC  L++L  PE++                 +    W     
Sbjct: 699 NLKALRKLPTTIHEISANNCTSLETLSSPEVI-----------------ADKWNWP---- 737

Query: 837 KSAAICFEFTNCLKLNGKANNKILADSLLR--IRHMAIASLRLGYEMAINEKLSELRGSL 894
                 F FTNC KL     N   A   LR  ++ + ++ L+       +   +  R  +
Sbjct: 738 -----IFYFTNCSKLAVNQGNDSTAFKFLRSHLQSLPMSQLQ-------DASYTGCRFDV 785

Query: 895 IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFC 934
           IV PG+E+P WFS+Q+ GSS+ IQL P        G A C
Sbjct: 786 IV-PGTEVPAWFSHQNVGSSLIIQLTPKWYNEKFKGLAIC 824


>gi|359496026|ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1250

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 344/1066 (32%), Positives = 502/1066 (47%), Gaps = 203/1066 (19%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
            KTT+A+++++Q S +FE  CF+S+VR +SE  G ++  ++ +       K+ ++  +I  
Sbjct: 228  KTTIARSVYEQISKQFEACCFLSNVREDSEKRGLVKLQEELLSRLLEEGKISISTVDIGL 287

Query: 79   HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
             F K R+R  ++LIVLDD + + QL+ L G+ D FG GSRI++TTRD  +L K       
Sbjct: 288  AFIKTRLRFKRVLIVLDDAHNLQQLEYLAGKHDWFGPGSRIIITTRDVHLLNKV--GVNG 345

Query: 139  IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            +Y V  L   +A   F   AF+E+H  ED    S   VSY KG PL L+VLGS L  K K
Sbjct: 346  VYEVAHLNNNDAVALFSRHAFEEDHPTEDYMELSNYAVSYAKGLPLALKVLGSFLFSKSK 405

Query: 199  SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
              W      L+++  +   DI  +L++SF+ L    + IFLD+ACFF+GEDKD+V  ILD
Sbjct: 406  LEWKS---QLDKLQINPHMDIESVLRVSFDGLDDTEQDIFLDVACFFKGEDKDYVIKILD 462

Query: 259  DS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK--------EPGKRS 307
                  S  + +LIDKSL+++  N L MHD+LQEMG  IVR+ S K        +PGK S
Sbjct: 463  SCGFYPSIGIRVLIDKSLITVVHNKLWMHDLLQEMGWDIVRKTSHKNPSKRRRLDPGKHS 522

Query: 308  RLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEI 367
            RLW  +++  VL    GT+ IEGIFL+L  +K I+    AF  M  LRL K Y       
Sbjct: 523  RLWLQEDVYDVLTEKTGTENIEGIFLNLYGLKEIHYTTEAFAEMKKLRLLKVYNSHNSGD 582

Query: 368  EKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCS 427
             +  S +   +  +S+       ++   KLRYL+W  YPL++LPSNF PKNLVELNL C 
Sbjct: 583  FEYASRNENYKRPFSQ-----DFEFPSNKLRYLYWHRYPLKSLPSNFHPKNLVELNLCCC 637

Query: 428  KVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEF 487
             VE+ W+G            K++  L                      I+ S+   L+  
Sbjct: 638  YVEELWKG-----------VKHMEKLE--------------------CIDLSHSQYLVRT 666

Query: 488  PQISG--KVTRL-YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
            P  SG   + RL + G + + EV  S+  L+ L  L+L+ CK L+   +S  +L SL  L
Sbjct: 667  PDFSGIPNLERLIFEGCTDLREVHQSLGVLSKLIFLNLKDCKNLQCFPSSI-ELESLKVL 725

Query: 545  ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL---------------- 588
            IL GC  L++FPEILE ME L+ ++ D T I ELP S E+L GL                
Sbjct: 726  ILSGCSKLDNFPEILENMEGLRELFLDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPS 785

Query: 589  --------EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS 640
                      L +  CS+L+ LP+N+G+LE L  ++A  SA+ Q PSS+ L   L+ L  
Sbjct: 786  SICNLKSLSTLTLSGCSQLEKLPENLGNLECLVELVADGSAVIQPPSSIVLLRNLKVLSF 845

Query: 641  SHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFE--SLPA 698
              C G  S  R      S + L  ISD     +P  ++ L SL+ L LS  N +  +LP 
Sbjct: 846  QGCNGSPS-SRWNSRFWSMLCLRRISDSTGFRLPS-LSGLCSLKQLNLSDCNIKEGALPN 903

Query: 699  IIKQ-MSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCN 757
             +   +S L +++L+  + +                          LP  +  L    CN
Sbjct: 904  DLGGYLSSLEYLNLKGNDFV-------------------------TLPTGISKL----CN 934

Query: 758  MLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDAS 817
                       L+ L L  C  L+ LP LP  +  +  +NC  L++L  +          
Sbjct: 935  -----------LKALYLGCCKRLQELPMLPPNINRINAQNCTSLETLSGL---------- 973

Query: 818  VLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRL 877
                                SA     FTN  + N                         
Sbjct: 974  --------------------SAPCWLAFTNSFRQN------------------------W 989

Query: 878  GYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
            G E  + E +S +      LPG+ IP+WF NQ  G SI +QLP H    N +GFA C V 
Sbjct: 990  GQETYLAE-VSRIPKFNTYLPGNGIPEWFRNQCMGDSIMVQLPSHWYNDNFLGFAMCIVF 1048

Query: 938  DSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYI--------EDLIDSDRVIL 989
              K+ +  C R   +    +LE   L  +   +LG    +I        +  ++SD + L
Sbjct: 1049 ALKEPNQ-CSRGAMLC---ELESSDLDPS---NLGCFLDHIVWEGHSDGDGFVESDHLWL 1101

Query: 990  GFKPCL-----NVGFPDGYHHTIATFKFFAERKFYKIKRCGLCPVY 1030
            G+ P       ++ +P+   H  A+F        +++K CG   VY
Sbjct: 1102 GYHPNFPIKKDDMDWPNKLSHIKASFVIAGIP--HEVKWCGFRLVY 1145


>gi|359496028|ref|XP_003635135.1| PREDICTED: putative disease resistance protein At4g11170-like [Vitis
            vinifera]
 gi|296090593|emb|CBI40962.3| unnamed protein product [Vitis vinifera]
          Length = 1284

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 353/1104 (31%), Positives = 541/1104 (49%), Gaps = 152/1104 (13%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            +D V++VGIWGMGGIGKTTLA+AI+ + S +FE  CF+ DV   ++ A   + L+K +LS
Sbjct: 217  ADDVRMVGIWGMGGIGKTTLARAIYKKISDKFEDRCFLDDV---ADLARKGQDLKKLLLS 273

Query: 64   TTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
              L +K ++V  P++    K R+   K+LIV+D+VN    L+ L+G  + FG  SRI++T
Sbjct: 274  NVLRDKNIDVTAPSL----KARLHFKKVLIVIDNVNNREILENLVGGPNWFGPKSRIIIT 329

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            TRD  +L  +   +  +Y V  L+ E+A + F ++AF+ +    D+      V++Y +G 
Sbjct: 330  TRDTHLLAAYGVND--VYEVQKLQDEKATKLFNHYAFRNDTPSRDVIELIDHVIAYAQGL 387

Query: 183  PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
            PL L+VLGSSLC K K  W   L+ L +I   EI ++   L+ SF++L    +++FLDIA
Sbjct: 388  PLALKVLGSSLCKKSKDEWLCELNKLQKIPNMEIQNV---LQTSFDELDYYQQNLFLDIA 444

Query: 243  CFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
              F GE KDFV  IL+         +  LIDKSL+S   + L++HD+L EMG++IVRQ  
Sbjct: 445  FVFWGELKDFVIDILNSCGFFPISGIRTLIDKSLISYIDDQLHIHDLLIEMGKEIVRQTF 504

Query: 300  EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
             +EPGKRSRLW  ++I  VL++  GT+ +E I LDL  +K I     AF  M+ LR+ + 
Sbjct: 505  PEEPGKRSRLWMQQDICHVLENLTGTEKVEVIDLDLHGLKEIRFTTAAFAKMTKLRVLQI 564

Query: 360  YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
               +         M  E       V + +   +   +LRYL WD YPL+ LPS+FK KNL
Sbjct: 565  DAAQ---------MQCE-------VHISDDFKFHYDELRYLFWDYYPLKLLPSDFKSKNL 608

Query: 420  VELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
            V L +  S + Q WEG K         F+ L  +     + L   P              
Sbjct: 609  VCLRMPNSHLTQLWEGNKV--------FESLKYMDLSDSKYLTETP-------------- 646

Query: 480  YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
                  +F +++     +  G + + ++  S+  L  L +L L  C  LK      C+L 
Sbjct: 647  ------DFSRVTNLECLILDGCTQLCKIHLSLGTLDKLTLLSLENCINLKHFP-GICQLV 699

Query: 540  SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
            SL TLIL GC  LE FP+I + M  L ++Y D T ITELPSS      L +L +++C KL
Sbjct: 700  SLKTLILSGCPKLEKFPDIAQHMPCLSKLYLDGTAITELPSSIAYATELVLLDLKNCRKL 759

Query: 600  DNLPDNIGSLEYLYYILAAASA-----------ISQLPSSV-ALSNMLRSLDSSHCKGLE 647
             +LP +I  L  L  +  +  +           +  LP ++  L N+ R L+  +C+ L 
Sbjct: 760  WSLPSSICQLTLLKTLSLSGCSDLGKCEVNSGNLDALPRTLDKLCNLWR-LELQNCRSLR 818

Query: 648  SFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQL 706
            + P       S++ +++  +    E     + L S++ L LSG    E  P I + M  L
Sbjct: 819  ALPAL----PSSLAIINARNCESLEDAGAFSQLVSVKTLILSGCPKLEKFPDIAQHMPCL 874

Query: 707  RFIHLEDFNMLQSLPELPLCLKY------LHLIDCKMLQSLPVLPFC----LESLDLTGC 756
              ++L+      ++ ELP  + Y      L L +C+ L SLP    C    LE+L L+GC
Sbjct: 875  SKLYLDG----TAITELPSSISYATELVLLDLKNCRKLWSLPS-SICQLTLLETLSLSGC 929

Query: 757  NMLR-------SLPELPLCLQYLN------LEDCNMLRSLPELPLCLQLLTVRNCNRLQS 803
            + L        +L  LP  L  L       L++C  LR+LP LP  L+ +   NC  L+ 
Sbjct: 930  SDLGKCEVNSGNLDALPRTLDQLRNLWRLELQNCKSLRALPVLPSSLEFINASNCESLED 989

Query: 804  LPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADS 863
            +                           +P+S+ S      F NC KL  K  +++  D 
Sbjct: 990  I---------------------------SPQSVFSQLRRSMFGNCFKLT-KFQSRMERDL 1021

Query: 864  LLRIRHMAIASLRLGYEMAINEKLSELRGSLI--VLPGSEIPDWFSNQSSGSSICIQLPP 921
                 H+     R  +E     + S +   L   V PGS IPDWF+++S G  I IQ+  
Sbjct: 1022 QSMAAHVDQKKWRSTFE-----EQSPVVHVLFSTVFPGSGIPDWFAHRSEGHEINIQVSQ 1076

Query: 922  HSSCRNLIGFAFCAVLDSKK--VDSDCFRYFYV---SFQFDLEIKTLSETKHVDLGYNSR 976
            +      +GFAF AV+  +K  + S    Y  +   +F  +L+   +     VD  +  +
Sbjct: 1077 NWYSSYFLGFAFSAVVAPEKEPLTSGWITYCDLRCGAFNSELKSNGIFSFSFVD-DWTEQ 1135

Query: 977  YIEDLIDSDRVILGFKPCLNVGF-PDGYHHTIATFKFFAERKFYKIKRCGLCPVYANPSE 1035
                 I SD + L + P   +GF P+ +  +   F F  +++   +KRCG+CPVY   S 
Sbjct: 1136 LEHITIASDHMWLAYVPSF-LGFSPEKW--SCIKFSFRTDKESCIVKRCGVCPVYIRSST 1192

Query: 1036 TKDNTFTINFATEVWKLDDLPSAS 1059
              D   T   A ++   +  P+ S
Sbjct: 1193 LDDAESTNAHAYDLEWFERQPNPS 1216


>gi|147802252|emb|CAN68265.1| hypothetical protein VITISV_020931 [Vitis vinifera]
          Length = 1441

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 320/978 (32%), Positives = 475/978 (48%), Gaps = 172/978 (17%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
            D +++VGI+G  GIGKTT+AK +++    +F G  F+ DV+  S      + LQ  +   
Sbjct: 228  DDIRMVGIYGPSGIGKTTMAKMVYNDILCQFNGGIFLEDVKSRSR----FQLLQDLLRGI 283

Query: 65   TLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
             + E +E+   N   +  K R+   K+ +V+DDV++  Q+K L+     FG GSRI++TT
Sbjct: 284  LVGENVELNNINDGINKIKGRLGSKKVFVVIDDVDDSEQVKSLVKSCKWFGLGSRIILTT 343

Query: 124  RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
            R K +L+ +  +E   Y    L  E+A + F   AFK+N   ED    S  +V+Y +G P
Sbjct: 344  RYKHLLDVYGVDES--YEAKVLCNEDAIQLFSWHAFKQNTPKEDYVDMSNLMVNYVQGLP 401

Query: 184  LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
            L ++VLGS L       W   L  L +    E  +IY++LKI ++ L    K I LDIAC
Sbjct: 402  LAIKVLGSFLYGMTIDEWKSTLGKLTK----EDQEIYNVLKICYDGLDDNEKEILLDIAC 457

Query: 244  FFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
            FF+GEDKDFV  IL   D  +++ + +L D+ L+SIS N ++MHD++Q+MG  +VR++S 
Sbjct: 458  FFKGEDKDFVLRILKSCDFYAEIGVRVLCDRCLISISNNRISMHDLIQQMGWTVVREKSP 517

Query: 301  KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
            ++P K SRLWDP  I       KG+  IE I  DLS+ K I  + + FT M  LRL K +
Sbjct: 518  EDPSKWSRLWDPDNIRHAFLGEKGSKNIEVISCDLSRSKEIQCNTKVFTKMKRLRLLKLH 577

Query: 361  VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                                  KV LP   ++  ++LRYLHW+ YPL+TLPSNF  +NLV
Sbjct: 578  WSDHC----------------GKVVLPPNFEFPSQELRYLHWEGYPLKTLPSNFHGENLV 621

Query: 421  ELNLRCSKVEQPWEGEKA----------------------------------CVP----- 441
            EL+LR S ++Q W+  K                                   C+      
Sbjct: 622  ELHLRKSTIKQLWKRSKGLEKLKVIDLSYSKVLTKMPKFSRMPKLEILNLEGCISLRKLH 681

Query: 442  SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL---Y 498
            SSI + K L+ L+  GC+ L+S PS++ F     ++ + C N   FP++   +  L   Y
Sbjct: 682  SSIGDVKMLTYLNLGGCEKLQSLPSSMKFESLEVLHLNGCRNFTNFPEVHENMKHLKELY 741

Query: 499  LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR-----------------------ISTSF 535
            L +SAIEE+PSSI  LT LE+LDL  C   K+                       + +S 
Sbjct: 742  LQKSAIEELPSSIGSLTSLEILDLSECSNFKKFPEIHGNMKFLRELRLNGTGIKELPSSI 801

Query: 536  CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
              L SL  L L  C N E FP I   M+ L+ ++ + T I ELPSS  +L  LE+L +  
Sbjct: 802  GDLTSLEILBLSECSNFEKFPGIHGNMKFLRELHLNGTRIKELPSSIGSLTSLEILNLSK 861

Query: 596  CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
            CSK +  PD   ++E+L  +  + S I +LPS++     L+ L         S  +TF  
Sbjct: 862  CSKFEKFPDIFANMEHLRKLYLSNSGIKELPSNIGNLKHLKEL---------SLDKTF-- 910

Query: 656  GLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDF 714
                          ++E+P+ I  L +L+ L L G +NFE  P I + M  L  + +E+ 
Sbjct: 911  --------------IKELPKSIWSLEALQTLSLRGCSNFEKFPEIQRNMGSLLDLEIEE- 955

Query: 715  NMLQSLPELPLCLKYL------HLIDCKMLQSLPVLPFC----LESLDLTGCNMLRSLPE 764
                ++ ELPL + +L      +L +CK L+SLP    C    L+ L L  C+ L + PE
Sbjct: 956  ---TAITELPLSIGHLTRLNSLNLENCKNLRSLPS-SICRLKSLKHLSLNCCSNLEAFPE 1011

Query: 765  --------------------LP------LCLQYLNLEDCNMLRSLPELP---LCLQLLTV 795
                                LP        LQ+L L +C  L +LP       CL  L V
Sbjct: 1012 ILEDMEHLRSLELRGTAITGLPSSIEHLRSLQWLKLINCYNLEALPNSIGNLTCLTTLVV 1071

Query: 796  RNCNRLQSLPEIL----LCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKL 851
            RNC++L +LP+ L     CL  LD      +    P   W   SL+   +      C+ +
Sbjct: 1072 RNCSKLHNLPDNLRSLQCCLTTLDLGGCNLMEGGIPRDIWGLSSLEFLDVSENHIRCIPI 1131

Query: 852  NGKANNKILADSLLRIRH 869
                  ++L  + LR+ H
Sbjct: 1132 ---GIIQLLKLTTLRMNH 1146



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 208/454 (45%), Gaps = 82/454 (18%)

Query: 332  FLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEI-EKLPSMSTEEQLSYSKV----QL 386
             LBLS+       P    NM  LR       +  E+   + S+++ E L+ SK     + 
Sbjct: 809  ILBLSECSNFEKFPGIHGNMKFLRELHLNGTRIKELPSSIGSLTSLEILNLSKCSKFEKF 868

Query: 387  PNGLDYLPKKLRYLHWDTYPLRTLPSNFKP-KNLVELNLRCSKVEQPWEGEKACVPSSIQ 445
            P+    + + LR L+     ++ LPSN    K+L EL+L  + +++        +P SI 
Sbjct: 869  PDIFANM-EHLRKLYLSNSGIKELPSNIGNLKHLKELSLDKTFIKE--------LPKSIW 919

Query: 446  NFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIE 505
            + + L  LS +GC +   FP                    E  +  G +  L + ++AI 
Sbjct: 920  SLEALQTLSLRGCSNFEKFP--------------------EIQRNMGSLLDLEIEETAIT 959

Query: 506  EVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHL 565
            E+P SI  LT L  L+L  CK L+ + +S C+L+SL  L L  C NLE FPEILE MEHL
Sbjct: 960  ELPLSIGHLTRLNSLNLENCKNLRSLPSSICRLKSLKHLSLNCCSNLEAFPEILEDMEHL 1019

Query: 566  KRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY-YILAAASAISQ 624
            + +    T IT LPSS E+L  L+ L + +C  L+ LP++IG+L  L   ++   S +  
Sbjct: 1020 RSLELRGTAITGLPSSIEHLRSLQWLKLINCYNLEALPNSIGNLTCLTTLVVRNCSKLHN 1079

Query: 625  LPSSV-ALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSL 683
            LP ++ +L   L +LD   C  +E                         IP++I  LSSL
Sbjct: 1080 LPDNLRSLQCCLTTLDLGGCNLMEG-----------------------GIPRDIWGLSSL 1116

Query: 684  EILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPV 743
            E L +S N+   +P  I Q+                     L L  L +  C ML+ +P 
Sbjct: 1117 EFLDVSENHIRCIPIGIIQL---------------------LKLTTLRMNHCLMLEDIPD 1155

Query: 744  LPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDC 777
            LP  L  ++  GC  L +L   P+ + + +L +C
Sbjct: 1156 LPSSLRRIEAHGCRCLETLSS-PIHVLWSSLLNC 1188


>gi|15234388|ref|NP_192938.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|4586106|emb|CAB40942.1| putative disease resistance protein (TMV N-like) [Arabidopsis
            thaliana]
 gi|7267902|emb|CAB78244.1| putative disease resistance protein (TMV N-like) [Arabidopsis
            thaliana]
 gi|332657683|gb|AEE83083.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1219

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 354/1133 (31%), Positives = 538/1133 (47%), Gaps = 208/1133 (18%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
            DTV I+GI GM GIGKTTLA  ++ +   +F+GSCF++++R NS  +G LE L +++ ST
Sbjct: 207  DTVHIIGIVGMVGIGKTTLADCLYGRMRGQFDGSCFLTNIRENSGRSG-LESLLQKLFST 265

Query: 65   TLSEK-LEVAGPNIPHFTKER-VRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
             L+++ LE+  P   H   ER ++  +LLIVLDDVN+  Q++ L+G    +  GSRI++T
Sbjct: 266  VLNDRDLEIGAPGNAHERFERRLKSKRLLIVLDDVNDEKQIRYLMGHCKWYQGGSRIIIT 325

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            TRD +++E  +G +  + ++N     EA + F   AF  +   ++    +  V+ Y KG+
Sbjct: 326  TRDSKLIETIKGRKYVLPKLND---REALKLFSLNAFSNSFPLKEFEGLTNMVLDYAKGH 382

Query: 183  PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
            PL L+VLGS LC +   +W      L+R+      DIY++L+ S+ +LT   K++FLDIA
Sbjct: 383  PLALKVLGSDLCERDDLYWEA---KLDRLKSRSHGDIYEVLETSYEELTTEQKNVFLDIA 439

Query: 243  CFFEGEDKDFVASILDDSESDVLDI---LIDKSLVSISGNFLNMHDILQEMGRQI----- 294
            CFF  E+ D+V S+L+    DV  +   L+DK L+++S N + MHD+LQ M ++I     
Sbjct: 440  CFFRSENVDYVTSLLNSHGVDVSGVVKDLVDKCLITLSDNRIEMHDMLQTMAKEISLKVE 499

Query: 295  ---VRQ-----ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR 346
               +R          +     RLWD ++I  +L    GTD I GIFLD SK++ + L  +
Sbjct: 500  TIGIRDCRWLSRHGNQCQWHIRLWDSEDICDLLTEGLGTDKIRGIFLDTSKLRAMRLSAK 559

Query: 347  AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
            AF  M NL+  K Y       +   S   E +    K+ L  GL +LP +L YLHW  YP
Sbjct: 560  AFQGMYNLKYLKIY-------DSHCSRGCEAEF---KLHLRRGLSFLPNELTYLHWHGYP 609

Query: 407  LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS 466
            L+++P +F PKNLV+L L  S++E+ W+ EK      +   K++  LS            
Sbjct: 610  LQSIPLDFDPKNLVDLKLPHSQLEEIWDDEK-----DVGMLKWVD-LSH----------- 652

Query: 467  NLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGC 525
                    +IN   C+ L      +  + RL L G ++++++PS+I CL  L  L+LR C
Sbjct: 653  --------SINLRQCLGLAN----AHNLERLNLEGCTSLKKLPSTINCLEKLIYLNLRDC 700

Query: 526  KRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL 585
              L+ +     K +SL TLIL GC +L+ FP I E +E L     D T I  LP S +  
Sbjct: 701  TSLRSLPKGI-KTQSLQTLILSGCSSLKKFPLISENVEVL---LLDGTVIKSLPESIQTF 756

Query: 586  PGLEVLFVEDCSKLDNL------------------------PDNIGSLEYLYYILAAASA 621
              L +L +++C KL +L                        P+    +E L  +L   ++
Sbjct: 757  RRLALLNLKNCKKLKHLSSDLYKLKCLQELILSGCSQLEVFPEIKEDMESLEILLMDDTS 816

Query: 622  ISQLPSSVALSNMLR-SL--DSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIA 678
            I+++P  + LSN+   SL   SSH   +  F     LG S +  L++S  ++ ++P  I 
Sbjct: 817  ITEMPKMMHLSNIKTFSLCGTSSHV-SVSMFFMPPTLGCSRLTDLYLSRCSLYKLPDNIG 875

Query: 679  YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
             LSSL+ L LSGNN E+LP              E FN L +L                  
Sbjct: 876  GLSSLQSLCLSGNNIENLP--------------ESFNQLNNL------------------ 903

Query: 739  QSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNC 798
                                           ++ +L+ C ML+SLP LP  LQ L    C
Sbjct: 904  -------------------------------KWFDLKFCKMLKSLPVLPQNLQYLDAHEC 932

Query: 799  NRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNK 858
              L++L   L  L     +V E++  HS                F F+NC KLN  A   
Sbjct: 933  ESLETLANPLTPL-----TVGERI--HS---------------MFIFSNCYKLNQDAQAS 970

Query: 859  ILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQ 918
            ++  + ++ + MA AS +  Y   + E L       I  P +EIP WF +Q  G S+ I 
Sbjct: 971  LVGHARIKSQLMANASAKRYYRGFVPEPLVG-----ICYPATEIPSWFCHQRLGRSLEIP 1025

Query: 919  LPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETK--HVDLGYNS- 975
            LPPH    N +G A   V+  K  + D  + F V    + E K  S T+      G+N  
Sbjct: 1026 LPPHWCDINFVGLALSVVVSFKDYE-DSAKRFSVKCCGNFENKDSSFTRFDFTLAGWNEP 1084

Query: 976  ----RYIEDLIDSDRVILGFKPCLNV----GFPDGYHHTIATFKFFAERKFYKIK----- 1022
                 +    + SD V +G+  C  V    G  +   +T A+F+F+      + K     
Sbjct: 1085 CGSLSHESRKLTSDHVFMGYNSCFLVKNVHGESNSCCYTKASFEFYVTDDETRKKIETCE 1144

Query: 1023 --RCGLCPVYANPSETKDNTFTINFATEVWKLDDLPSASGTLDVEELELSPKR 1073
              +CG+  +Y    E  D             L   PS S  LD    ++ PKR
Sbjct: 1145 VIKCGMSLMYV--PEDDDCMLLKKTNIVQLSLKSGPSCSYDLDDVMDDVRPKR 1195


>gi|224145341|ref|XP_002325608.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862483|gb|EEE99989.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1083

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 361/1158 (31%), Positives = 531/1158 (45%), Gaps = 286/1158 (24%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQF--SHEFEGSCFVSDVRGNSETAGGLEHLQ 58
            M+S D V IVGIWGMGGIGKTT+AKA+ D       F+   F ++ R  S+       L+
Sbjct: 26   MESPD-VLIVGIWGMGGIGKTTIAKAVRDNMYIRSRFD-RIFYANFRQKSD-------LR 76

Query: 59   KQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKR----LIGELDQFG 114
            ++ L   L ++   +      F +ER+ R+K+LIVLDDV+ +  L+     L G  + FG
Sbjct: 77   RKFLKQLLGQETLGSLSFRDSFVRERLSRIKILIVLDDVHNLMHLEEWRDLLDGRNNSFG 136

Query: 115  QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS-R 173
             GS++++T+RDK+VL     +E K Y+V  L +EEA + F + A K N  P     H   
Sbjct: 137  PGSKVLITSRDKQVLNNVV-DENKTYKVKELNYEEAIQLFRSNALK-NCIPTIDQMHMIE 194

Query: 174  SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
             +  + +GNPL L+VLGSS   K    W   L+ L+     +  +I D+L+IS++ L   
Sbjct: 195  QIPRHVQGNPLALKVLGSSFYGKSMEVWRSALNKLD-----QNRNIKDVLRISYDGLDSE 249

Query: 234  VKSIFLDIACFFEGEDKDFVASILD-----------------------DSESDVLDI--- 267
             +SIFLDIA FF   + D    ILD                       DS  D   +   
Sbjct: 250  QQSIFLDIAHFFINWNPDEATRILDCLHGRSVISDITTLIDNCLITNVDSSCDEWQLDCL 309

Query: 268  -----------LIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
                       L+D+ LV+ S   L MHD+L+EM   IVR ES + PGKRSRL  P ++ 
Sbjct: 310  YGRSVNFDIYTLLDQCLVNTSHISLEMHDLLREMAFNIVRAES-RFPGKRSRLCHPPDVV 368

Query: 317  RVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSNLRLFKFYVPKFYEIEK--LPSM 373
            +VL+ NKGT+ IEGI LD+SK+ + I+L   AF  M  LR   FY   + + +K  LP  
Sbjct: 369  QVLEENKGTEEIEGISLDMSKLSRQIHLKSDAFAMMDGLRFLNFYGRPYSQDDKMHLP-- 426

Query: 374  STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
                         P GL YLP KLRYL WD +P ++LP  F+ ++LVEL+LR SK+ + W
Sbjct: 427  -------------PPGLKYLPNKLRYLRWDGFPSKSLPLAFRAEHLVELHLRESKLVKLW 473

Query: 434  EGEKAC---------------------------------------VPSSIQNFKYLSALS 454
             G K                                         VPSS+Q    L  ++
Sbjct: 474  TGVKDVGNLRTIDLSKSSYLTELPDLSMAKNLVSLRLKDCPSLTEVPSSLQYLDKLEYIN 533

Query: 455  FKGCQSLRSFPSNLHFV--------------CPV-------------------------- 474
             + C +LRSFP     V              CP                           
Sbjct: 534  LRCCYNLRSFPMLYSKVLRKLSIDQCLDLTTCPTISQNMKSLRLWGTSIKEVPQSITGKL 593

Query: 475  -TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
              ++   C  + +FP++SG +  L+L ++AI+EVPSSI+ LT L  L++ GC +L+ +  
Sbjct: 594  KVLDLWGCSKMTKFPEVSGDIEELWLSETAIQEVPSSIQFLTRLRELEMNGCSKLESLPE 653

Query: 534  SFCKLRSL------VTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPS-SFENLP 586
                + SL      V L + GC  LE  P+I   ME L  +   +T I E+PS SF+++ 
Sbjct: 654  ITVPMESLDLSQDSVILDMSGCSKLESLPQITVPMESLVELNLSKTGIKEIPSISFKHMT 713

Query: 587  GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
             L++L      KLD  P                  + +LPSS+     L+SLD S C  L
Sbjct: 714  SLKIL------KLDGTP------------------LKELPSSIQFLTRLQSLDMSGCSKL 749

Query: 647  ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQ 705
            ESFP+   + + ++  L+++   ++E+P  I +L+ L+ L +SG +  ES P I   M  
Sbjct: 750  ESFPQ-ITVPMESLAELNLNGTPLKELPSSIQFLTRLQSLDMSGCSKLESFPEITVPMES 808

Query: 706  LRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPV--LPF------CLESLDLTGCN 757
            L  ++L        + ELPL +K +  +    L+  P+  LP       CLE L L G  
Sbjct: 809  LAELNLSK----TGIKELPLSIKDMVCLKKLTLEGTPIKELPLSIKDMVCLEELTLHGTP 864

Query: 758  MLRSLP-ELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDA 816
             +++LP +LP  L+YL   DC+ L ++P         ++ N  RLQ              
Sbjct: 865  -IKALPDQLPPSLRYLRTRDCSSLETVP---------SIINIGRLQ-------------- 900

Query: 817  SVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLR 876
                        L+W            +FTNC K++ K         L+   H+ I S  
Sbjct: 901  ------------LRW------------DFTNCFKVDQKP--------LIEAMHLKIQS-- 926

Query: 877  LGYEMAINEKLSELRGSL-IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCA 935
             G E+         RG + +V+PGSEIP+WF ++  GSS+ IQLP  S+   L G AFC 
Sbjct: 927  -GEEIP--------RGGIEMVIPGSEIPEWFGDKGVGSSLTIQLP--SNRHQLKGIAFCL 975

Query: 936  VLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCL 995
            V        D +  ++V ++         +     LG          DSD +IL ++   
Sbjct: 976  VFLLPPPSQDLYCDYHVKYKNGEHDAASRKVISYKLGT--------CDSDHMILQYRL-- 1025

Query: 996  NVGFPDGYHHTIATFKFF 1013
             V     Y     TFKF+
Sbjct: 1026 -VNQLREYSANEVTFKFY 1042


>gi|359493553|ref|XP_003634625.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1273

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 274/814 (33%), Positives = 432/814 (53%), Gaps = 95/814 (11%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S+ V++VGI+G GGIGKTTLAK + ++  H++EG+ F+  VR       GL +LQKQ+L 
Sbjct: 247  SNDVRMVGIYGCGGIGKTTLAKVVCNRIFHQYEGTIFLGSVREACADHRGLLNLQKQLLD 306

Query: 64   TTLSEKLEVAGPNIPHFT-KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
              + E   V+  +      K      ++LI+LDD++++ QL+ L+G  + FG GSRI++T
Sbjct: 307  ILVGENHNVSSLDQGKLMIKNTFNCKRVLIILDDIDDLSQLESLVGSKEWFGPGSRIIIT 366

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            TR+K +L+    ++   Y++  L+ E++ E F   AF++NH  +   + S+ +V Y KG 
Sbjct: 367  TRNKHLLKLHHLDDS--YQMKELDVEDSIELFSWSAFRQNHPKQKYAYLSKCIVDYAKGL 424

Query: 183  PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
            PL L++LGS L  +    W   LH L RI   EI     +L+ISF+ L    K IFLDIA
Sbjct: 425  PLALKILGSLLYERTILEWESELHKLKRIPNMEI---LHVLRISFDGLDREQKEIFLDIA 481

Query: 243  CFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKE 302
            CFF+G+D DFV+ ILD      +  L D+SL++I  N ++MHD++Q+MG +IVR++  ++
Sbjct: 482  CFFKGQDMDFVSRILDGYSG--IRHLSDRSLITILNNKIHMHDLIQQMGWEIVREKYPRD 539

Query: 303  PGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVP 362
            P K SRLW+P++I R     +G + +E IF+DLS++K I  + + +  M  LRL +    
Sbjct: 540  PNKWSRLWEPEDIYRAFIRKQGMENVEAIFMDLSRMKEIQFNSQVWAEMMKLRLLQIICN 599

Query: 363  KFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
               E  K+           SKV  P   ++   +L YL W+ YPL++LPSNF  +NL+E+
Sbjct: 600  DDEEFMKME----------SKVHFPEDFEFPSYELSYLLWERYPLKSLPSNFYGENLIEI 649

Query: 423  NLRCSKVEQPWEGEKAC---------------------------------------VPSS 443
            NL+ S + Q W+G K                                         + SS
Sbjct: 650  NLKKSNIRQLWQGNKCLGKLKVLNLQGSTQLDHISNFSTMPNLERLNLRLCGSLDKIDSS 709

Query: 444  IQNFKYLSALSFKGCQSLRSFPSNLHFVCPV-TINFSYCVNLIEFPQISGKVTR----LY 498
            I     L+ L    C+ L+S PS++ ++  +  +    C +L +F ++     +    L+
Sbjct: 710  IGVLTKLTWLDLSNCKLLKSLPSSIQYLDSLEELYLRNCSSLEKFLEMERGCMKGLRELW 769

Query: 499  LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
            L  +AIEE+ SSI  +T LE+L LR CK LK + ++ C L SL TL L  C NLE FPEI
Sbjct: 770  LDNTAIEELSSSIVHITSLELLSLRICKNLKSLPSNICGLESLTTLDLRDCSNLETFPEI 829

Query: 559  LEKMEHLKRIYSDRTPITELPSSFEN------------------------LPGLEVLFVE 594
            +E M+HL+ +    T I ++ + FE+                        L  L  L + 
Sbjct: 830  MEDMQHLESLNLRGTGIKQIAAPFEHLNQLLFFSLCFCKNLRSLPSNICRLESLTTLDLN 889

Query: 595  DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT-- 652
             CS L+  P+ +  ++ L  +    +AI +LPSSV     LR LD S+CK LE+ P T  
Sbjct: 890  HCSNLETFPEIMEDMQELKNLDLRGTAIKELPSSVQRIKRLRYLDLSNCKNLETLPHTIY 949

Query: 653  ---FLLGLSAMGLLHISDYAVREIP--QEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
               FL+ L+A G   +  +  R +   + +  L +L++ Y  G    ++ + I Q  +LR
Sbjct: 950  DLEFLVDLTAHGCPKLKKFP-RNMGNLKGLRSLENLDLSYCDGME-GAIFSDIGQFYKLR 1007

Query: 708  FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
             +++    +LQ +PE P  L+ +   DC  L++L
Sbjct: 1008 ELNISHCKLLQEIPEFPSTLREIDAHDCTALETL 1041



 Score = 43.1 bits (100), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 118/288 (40%), Gaps = 86/288 (29%)

Query: 554 HFPEILEKMEH-LKRIYSDRTPITELPSSF--ENL--------------------PGLEV 590
           HFPE  E   + L  +  +R P+  LPS+F  ENL                      L+V
Sbjct: 612 HFPEDFEFPSYELSYLLWERYPLKSLPSNFYGENLIEINLKKSNIRQLWQGNKCLGKLKV 671

Query: 591 LFVEDCSKLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
           L ++  ++LD++ +   + +LE L   L    ++ ++ SS+ +   L  LD S+CK L+S
Sbjct: 672 LNLQGSTQLDHISNFSTMPNLERLN--LRLCGSLDKIDSSIGVLTKLTWLDLSNCKLLKS 729

Query: 649 FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
            P +                        I YL SLE LYL   N  SL          +F
Sbjct: 730 LPSS------------------------IQYLDSLEELYL--RNCSSLE---------KF 754

Query: 709 IHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC 768
           + +E    ++ L EL     +L     + L S  V    LE L L  C  L+SLP     
Sbjct: 755 LEMER-GCMKGLREL-----WLDNTAIEELSSSIVHITSLELLSLRICKNLKSLPSNICG 808

Query: 769 LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDA 816
           L+                   L  L +R+C+ L++ PEI+  +Q L++
Sbjct: 809 LE------------------SLTTLDLRDCSNLETFPEIMEDMQHLES 838


>gi|224133498|ref|XP_002328057.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222837466|gb|EEE75845.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1187

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 311/951 (32%), Positives = 460/951 (48%), Gaps = 201/951 (21%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           M++ D V+IVGIWGMGGIGKTT+A+A++++   +FEG  F+++VR   +     + LQ++
Sbjct: 213 METQD-VRIVGIWGMGGIGKTTIARAVYNKICTKFEGFSFMANVREELKRRTVFD-LQRR 270

Query: 61  MLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGEL-DQFGQGSRI 119
             S  L +K+    P    F K+R+RR K+LIV DDV+    L+ L+ E  D FG GSRI
Sbjct: 271 FFSRILDQKIWETSP----FIKDRLRRKKVLIVFDDVDSSMVLQELLLEQRDAFGPGSRI 326

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS-VVSY 178
           +VT+RD++VL +   E    Y V  L   +A + F   AFK+  CP   + H    +V+Y
Sbjct: 327 LVTSRDQQVLNQ---EVDATYEVKALNHMDALQLFKTKAFKKT-CPTIDHIHLLGRMVTY 382

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
           TKGNPL L VLGS+LC K K  W    + L +I   EI    ++L++SF+ L    +SIF
Sbjct: 383 TKGNPLALVVLGSALCDKSKEDWYSASNGLGQIQNVEI---LNVLRVSFDGLNTEQRSIF 439

Query: 239 LDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
           L IACFF+G ++     IL++    V   + +LIDKSLV  S N L MHD+LQEM   IV
Sbjct: 440 LHIACFFKGINRLHFTRILENKCPAVHYYISVLIDKSLVLASDNILGMHDLLQEMAYSIV 499

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
            +ESE +PG+RSRL+DP++I +VLK NKGT  ++GI LD+SK + ++L   +F  M+ L 
Sbjct: 500 HEESE-DPGERSRLFDPEDIYKVLKENKGTKRVKGICLDMSKSRKMSLKTDSFAGMNCLE 558

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPN-GLDYLPKKLRYLHWDTYPLRTLPSNF 414
              FY P ++E+EK            ++V LP+ GL+YL  +LRY HWD +P ++LP +F
Sbjct: 559 FLIFYNPSYFEVEK------------NRVHLPHSGLEYLSNELRYFHWDGFPSKSLPQDF 606

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             +NLV+ +   SKVE+ W G+        QN   L A                      
Sbjct: 607 SAENLVQFDFSESKVEKLWSGK--------QNLLNLKA---------------------- 636

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            IN S    L E P +S  +                     +LE ++L GC+ LKR+ +S
Sbjct: 637 -INLSSSRCLTELPDLSKAI---------------------NLEYINLSGCESLKRVPSS 674

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
           F  L  L  L L  C NL   P         +RI S                 LE LF+ 
Sbjct: 675 FQHLEKLKCLDLTDCHNLITLP---------RRIDS---------------KCLEQLFIT 710

Query: 595 DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
            CS + N P+    + YL     + +++ ++P S+ L    R +    CK +  FP    
Sbjct: 711 GCSNVRNCPETYADIGYLDL---SGTSVEKVPLSIKL----RQISLIGCKNITKFP---- 759

Query: 655 LGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDF 714
                                      ++ +L L     E +P+ I+ +++L  +H+ D 
Sbjct: 760 -----------------------VISENIRVLLLDRTAIEEVPSSIEFLTKLVSLHMFDC 796

Query: 715 NMLQSLPELPLCLKYL---HLIDCKMLQSLPVLPFCLESLD--LTGCNMLRSLP---ELP 766
             L  LP     LK+L   +L  C  L++ P +   ++SL     G   ++ LP      
Sbjct: 797 KRLSKLPSSICKLKFLENFYLSGCSKLETFPEIKRPMKSLKTLYLGRTAIKKLPSSIRHQ 856

Query: 767 LCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHS 826
             L +L L+  +M + L ELP  L +L+ R+C  L+++    L                 
Sbjct: 857 KSLIFLELDGASM-KELLELPPSLCILSARDCESLETISSGTL----------------- 898

Query: 827 PDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEK 886
                      S +I     NC + +    N I+ D  L+I+   I  +           
Sbjct: 899 -----------SQSIRLNLANCFRFD---QNAIMEDMQLKIQSGNIGDM----------- 933

Query: 887 LSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
                   I+ PGSEIP WF N+S GSS+ IQLP  S C  L   AFC ++
Sbjct: 934 ------FQILSPGSEIPHWFINRSWGSSVAIQLP--SDCHKLKAIAFCLIV 976


>gi|297740941|emb|CBI31253.3| unnamed protein product [Vitis vinifera]
          Length = 1426

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 341/1123 (30%), Positives = 508/1123 (45%), Gaps = 218/1123 (19%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            DS D + +VGI+G GGIGKTT+AK ++++  ++F  + F+ DVR  +        LQ+Q+
Sbjct: 233  DSHD-ISVVGIYGTGGIGKTTIAKIVYNEIQYQFTSASFLQDVR-ETFNKRCQLQLQQQL 290

Query: 62   LSTTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            L  T+ +  E    N      K R+   K+LIV+DDV+E+ QL+ + G    FG GS I+
Sbjct: 291  LHDTVGDDEEFRNINKGIDIIKARLSSKKVLIVIDDVDELEQLESVAGSPKWFGPGSTII 350

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            +TTR++ +L ++  E    Y   GL + EA + F   AFK+N   ED    S  +V Y +
Sbjct: 351  ITTRNRHLLVEY--EATISYEATGLHYREALQLFSRHAFKQNDPKEDYVDLSNCMVQYAQ 408

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            G PL L+VLGSSL       W   L+ L      +I+D+   L+IS + L    K +FLD
Sbjct: 409  GLPLALKVLGSSLRGMTIEQWESALNKLKTNLNKKINDV---LRISLDGLDYSQKEVFLD 465

Query: 241  IACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
            IACFF+GE +DFV+ IL D + D    +  L D+ LV+I  N + MHD++QEMG  IVR+
Sbjct: 466  IACFFKGECEDFVSRILYDCKLDPKINIKNLHDRCLVTIRDNVIQMHDLIQEMGYAIVRE 525

Query: 298  ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
            E  ++P K SRLWD  +I       +G + I+ I LDLS+ K I      F  M  LRL 
Sbjct: 526  ECPRDPHKWSRLWDADDIYNAFSRREGMENIQTISLDLSRSKEIQFSTEVFATMKQLRLL 585

Query: 358  KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
            K Y            ++ EE     +V LP   ++ P  LRY+HW    LR+LPS+F  +
Sbjct: 586  KIYC------NDRDGLTREEY----RVHLPKDFEF-PHDLRYIHWQRCTLRSLPSSFCGE 634

Query: 418  NLVELNLRCSKVEQPWEGEK----------------------------------ACVP-- 441
             L+E+NL+ S +++ W+G K                                   C    
Sbjct: 635  QLIEINLKSSNIKRLWKGNKRLEKLKGIDLSNSKQLVKMPEFSSMPNLERLNLEGCTSLC 694

Query: 442  ---SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI---SGKVT 495
               SSI + K L+ L+ +GC+ L+SFP+N+ F     +  + C  L + P+I    G + 
Sbjct: 695  ELHSSIGDLKQLTYLNLRGCEQLQSFPTNMKFESLEVLCLNQCRKLKKIPKILGNMGHLK 754

Query: 496  RLYLGQSAIEEVPSSIECLTDLEVLDL--------------------------------- 522
            +L L  S I+E+P SI  L  LE+LDL                                 
Sbjct: 755  KLCLNGSGIKELPDSIGYLESLEILDLSNCSKFEKFPEIRGNMKCLKRLSLDETAIKELP 814

Query: 523  --------------RGCKRLKRISTSFCKLRSLVTLIL-----------LGCL------- 550
                          R C + ++ S  F  +R L+ L L           +GCL       
Sbjct: 815  NSIGSLTSLELLSLRKCSKFEKFSDVFTNMRRLLILNLRESGIKELPGSIGCLEFLLQLD 874

Query: 551  -----NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
                   E FPEI   M+ LKR+  D T I ELP+S  ++  LE+L +  CSK +   D 
Sbjct: 875  LSYCSKFEKFPEIRGNMKRLKRLSLDETAIKELPNSIGSVTSLEILSLRKCSKFEKFSDV 934

Query: 606  IGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHI 665
              ++ +L  +    S I +LP S+     L  LD S+C   E F       +  + +L++
Sbjct: 935  FTNMRHLQILNLRESGIKELPGSIGCLESLLQLDLSNCSKFEKFSE-IQWNMKFLRVLYL 993

Query: 666  SDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
                ++E+P  I  L  LEIL L G +N E LP I K M  LR + L       ++  LP
Sbjct: 994  KHTTIKELPNSIGCLQDLEILDLDGCSNLERLPEIQKDMGNLRALSLAG----TAIKGLP 1049

Query: 725  LCLKY------LHLIDCKMLQSLPVLPFC----LESLDLTGCNMLRS------------- 761
              ++Y      L L +C+ L+SLP    C    L+ L + GC+ L +             
Sbjct: 1050 CSIRYFTGLHHLTLENCRNLRSLP--DICGLKSLKGLFIIGCSNLEAFSEITEDMEQLKR 1107

Query: 762  -------LPELPLCLQYLN------LEDCNMLRSLP---ELPLCLQLLTVRNCNRLQSLP 805
                   + ELP  +++L       L +C  L +LP       CL +L VRNC +L +LP
Sbjct: 1108 LLLRETGITELPSSIEHLRGLDSLELINCKNLVALPISIGSLTCLTILRVRNCTKLHNLP 1167

Query: 806  EILLCLQ----ELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNC------------- 848
            + L  L+    +LD      +    P   W   SL+S  +      C             
Sbjct: 1168 DNLRGLRRRLIKLDLGGCNLMEGEIPSDLWCLSSLESLYVSENHIRCIPAGITQLFKLKT 1227

Query: 849  LKLNGKANNKILADSLLRIRHMAI----------------ASLRLGYEMAINEKLSELRG 892
            L +N     K + +    + +M                  +SL   ++ AI       R 
Sbjct: 1228 LNMNHCPMLKEIGELPSSLTYMEARGCPCLETETFSSPLWSSLLKYFKSAIQSTFFGPRR 1287

Query: 893  SLIVLPGSE-IPDWFSNQSSGSSICIQLPPH-SSCRNLIGFAF 933
               V+PGS  IP+W S+Q  G  + I+LP +     N +GF  
Sbjct: 1288 --FVIPGSSGIPEWVSHQRIGCEVRIELPMNWYEDNNFLGFVL 1328


>gi|147822714|emb|CAN68293.1| hypothetical protein VITISV_015601 [Vitis vinifera]
          Length = 1254

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 296/843 (35%), Positives = 423/843 (50%), Gaps = 135/843 (16%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            + SD V+++GI G+GGIGKTTLAK +++Q  ++FEG+CF+S V     +   L  LQ ++
Sbjct: 217  NDSDNVRMIGIHGIGGIGKTTLAKIVYNQNFYKFEGACFLSSV-----SKRDLLQLQNEL 271

Query: 62   LSTTLSEKLEVAGPNIP---------HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQ 112
            L         + GP  P         +  K+R+R  K+L++LDD+++  QL+ L      
Sbjct: 272  LKA-------LTGPYFPSARNIYEGINMIKDRLRFRKVLVILDDIDDQAQLEFLAVRSKW 324

Query: 113  FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
            FG GSRI+VTTRDKR+L+ FR     +Y V  L  EEA   F  +AF  +   +     S
Sbjct: 325  FGSGSRIIVTTRDKRLLQVFR-----LYEVKELNSEEALHLFSLYAFMMDGPQKGFEKLS 379

Query: 173  RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
            R +V + +G PL L+VLGS L  + K  W   L  +  +   +IH +   L  SF+ L  
Sbjct: 380  RCIVDHCEGLPLALKVLGSLLYGRTKPEWENELAKMRNLRSQKIHSV---LLRSFHGLDR 436

Query: 233  RVKSIFLDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQE 289
              + I LDIACFF+GED  FV  IL+         + IL +K+L+S+S + L MHD++Q+
Sbjct: 437  TNRRILLDIACFFKGEDIKFVREILEACNFCAHPGIRILNEKALISVSNDKLLMHDLIQQ 496

Query: 290  MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFT 349
            MG  IVR++   EPGK SRLWDP++I  VL  N GT AIEGIFLD+S  K I+L   AF 
Sbjct: 497  MGWDIVREKYPDEPGKWSRLWDPEDIYHVLTTNTGTQAIEGIFLDMSASKEIHLTTDAFK 556

Query: 350  NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
             M  LRL + Y         L ++S         + LP    +   +LRYLHWD + L +
Sbjct: 557  KMKKLRLLRVY-------HNLKNIS-------DTIHLPQDFKFPSHELRYLHWDGWTLES 602

Query: 410  LPSNFKPKNLVELNLRCSKVEQPWEGEK-------------------------------- 437
            LPSNF  + LVEL+L+ S +++ W+  K                                
Sbjct: 603  LPSNFHGEKLVELSLKHSSIKRLWKEHKCLGKLKVINLSNSQHLVECPNLSGAPHVKRLI 662

Query: 438  --AC-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
               C     V  S+   K L+ L+ K C+ L  FPS         +N S C  L +FP+I
Sbjct: 663  LDGCTSLLEVHPSVAKLKRLTILNMKNCKMLHHFPSITGLESLKVLNLSGCSKLDKFPEI 722

Query: 491  SGKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL 547
             G +   + L L  +AI E+PSS+  L  L  LD++ CK LK + ++ C L+SL TL+  
Sbjct: 723  QGYMEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLKSLETLVFS 782

Query: 548  GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG-------------------- 587
            GC  LE FPEI+E ME L+++  D T I ELP S  +L G                    
Sbjct: 783  GCSGLEMFPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLPNSIC 842

Query: 588  ----LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
                LE L V  CS L+ LP+ +GSL+YL  + A  +AI+Q P S+     L+ L    C
Sbjct: 843  SLRSLETLIVSGCSNLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLKELSFRGC 902

Query: 644  KGLES---------------------FPRTFLLGLSAMGLLHISDYAVRE--IPQEIAYL 680
            KG  S                         +L GL ++  L +S   + +  I   +  L
Sbjct: 903  KGSTSNSWIXSLVFRLLRRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDGSINDNLGRL 962

Query: 681  SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
              LE L LS NN   +P  + ++S LR + +     LQ + +LP  +K L   DC  L+ 
Sbjct: 963  RFLEELNLSRNNLVMVPEGVHRLSNLRVLSVNQCKSLQEISKLPPSIKSLDAGDCISLEF 1022

Query: 741  LPV 743
            L +
Sbjct: 1023 LSI 1025


>gi|359495221|ref|XP_002274238.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1181

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 296/843 (35%), Positives = 423/843 (50%), Gaps = 135/843 (16%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            + SD V+++GI G+GGIGKTTLAK +++Q  ++FEG+CF+S V     +   L  LQ ++
Sbjct: 204  NDSDNVRMIGIHGIGGIGKTTLAKIVYNQNFYKFEGACFLSSV-----SKRDLLQLQNEL 258

Query: 62   LSTTLSEKLEVAGPNIP---------HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQ 112
            L         + GP  P         +  K+R+R  K+L++LDD+++  QL+ L      
Sbjct: 259  LKA-------LTGPYFPSARNIYEGINMIKDRLRFRKVLVILDDIDDQAQLEFLAVRSKW 311

Query: 113  FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
            FG GSRI+VTTRDKR+L+ FR     +Y V  L  EEA   F  +AF  +   +     S
Sbjct: 312  FGSGSRIIVTTRDKRLLQVFR-----LYEVKELNSEEALHLFSLYAFMMDGPQKGFEKLS 366

Query: 173  RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
            R +V + +G PL L+VLGS L  + K  W   L  +  +   +IH +   L  SF+ L  
Sbjct: 367  RCIVDHCEGLPLALKVLGSLLYGRTKPEWENELAKMRNLRSQKIHSV---LLRSFHGLDR 423

Query: 233  RVKSIFLDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQE 289
              + I LDIACFF+GED  FV  IL+         + IL +K+L+S+S + L MHD++Q+
Sbjct: 424  TNRRILLDIACFFKGEDIKFVREILEACNFCAHPGIRILNEKALISVSNDKLLMHDLIQQ 483

Query: 290  MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFT 349
            MG  IVR++   EPGK SRLWDP++I  VL  N GT AIEGIFLD+S  K I+L   AF 
Sbjct: 484  MGWDIVREKYPDEPGKWSRLWDPEDIYHVLTTNTGTQAIEGIFLDMSASKEIHLTTDAFK 543

Query: 350  NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
             M  LRL + Y         L ++S         + LP    +   +LRYLHWD + L +
Sbjct: 544  KMKKLRLLRVY-------HNLKNIS-------DTIHLPQDFKFPSHELRYLHWDGWTLES 589

Query: 410  LPSNFKPKNLVELNLRCSKVEQPWEGEK-------------------------------- 437
            LPSNF  + LVEL+L+ S +++ W+  K                                
Sbjct: 590  LPSNFHGEKLVELSLKHSSIKRLWKEHKCLGKLKVINLSNSQHLVECPNLSGAPHVKRLI 649

Query: 438  --AC-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
               C     V  S+   K L+ L+ K C+ L  FPS         +N S C  L +FP+I
Sbjct: 650  LDGCTSLLEVHPSVAKLKRLTILNMKNCKMLHHFPSITGLESLKVLNLSGCSKLDKFPEI 709

Query: 491  SGKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL 547
             G +   + L L  +AI E+PSS+  L  L  LD++ CK LK + ++ C L+SL TL+  
Sbjct: 710  QGYMEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLKSLETLVFS 769

Query: 548  GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG-------------------- 587
            GC  LE FPEI+E ME L+++  D T I ELP S  +L G                    
Sbjct: 770  GCSGLEMFPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLPNSIC 829

Query: 588  ----LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
                LE L V  CS L+ LP+ +GSL+YL  + A  +AI+Q P S+     L+ L    C
Sbjct: 830  SLRSLETLIVSGCSNLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLKELSFRGC 889

Query: 644  KGLES---------------------FPRTFLLGLSAMGLLHISDYAVRE--IPQEIAYL 680
            KG  S                         +L GL ++  L +S   + +  I   +  L
Sbjct: 890  KGSTSNSWISSLVFRLLRRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDGSINDNLGRL 949

Query: 681  SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
              LE L LS NN   +P  + ++S LR + +     LQ + +LP  +K L   DC  L+ 
Sbjct: 950  RFLEELNLSRNNLVMVPEGVHRLSNLRVLSVNQCKSLQEISKLPPSIKSLDAGDCISLEF 1009

Query: 741  LPV 743
            L +
Sbjct: 1010 LSI 1012


>gi|147821215|emb|CAN66453.1| hypothetical protein VITISV_004613 [Vitis vinifera]
          Length = 1441

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 355/1112 (31%), Positives = 520/1112 (46%), Gaps = 235/1112 (21%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S+ V +VGI+G GGIGKTT+AK ++++   +F  + F+++VR +S++ G L +LQKQ+L 
Sbjct: 419  SNNVXMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANVREDSKSRG-LLYLQKQLLH 477

Query: 64   TTLSEK---LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
              L ++   +      I H  K+R+   K+L+VLDDV+++ QL+ L G+ + FG GSRI+
Sbjct: 478  DILPKRKNFIRNVDEGI-HMIKDRLCFKKVLLVLDDVDDLNQLEALAGDHNWFGPGSRII 536

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            VTTRDK +LE    E   +Y    L+ +EA E FC  AFK+NH  ED    S SVV Y  
Sbjct: 537  VTTRDKHLLEVH--EMDALYEAKKLDHKEAVELFCWNAFKQNHPKEDYKTLSNSVVHYVN 594

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            G PL          LKR+ +                 +I  +LK S++ L    + IFLD
Sbjct: 595  GLPL---------GLKREPN----------------QEIQRVLKRSYDVLDYTQQXIFLD 629

Query: 241  IACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
            +ACFF GEDKDFV  ILD         + +L DK  ++I  N + MHD+LQ+MGR IVRQ
Sbjct: 630  VACFFNGEDKDFVTRILDACNFYAXSGIGVLGDKCFITILDNKIWMHDLLQQMGRDIVRQ 689

Query: 298  ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
            E  K+PGK SRL  P+ ++RVL                                      
Sbjct: 690  ECPKDPGKWSRLCYPEVVNRVLTR------------------------------------ 713

Query: 358  KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
                 K +++E   +   E+    +KV+L    ++   +LRYLHW  YPL +LP  F  +
Sbjct: 714  -----KMWDLEX--AFMRED----NKVKLSKDFEFPSYELRYLHWHGYPLESLPLGFYAE 762

Query: 418  NLVELNLRCSKVEQPWEGE----------KAC------VPSSIQNFKYLSALSFKGCQSL 461
            +LVEL++  S +++ WEG+           +C      +P  I +   L  L   GC SL
Sbjct: 763  DLVELDMCYSSLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDIIVSAPNLEKLILDGCSSL 822

Query: 462  RS------------------------FPSNLHFVCPVTINFSYCVNLIEFPQISGKVT-- 495
                                      FPS +       +NFS C  L +FP I G +   
Sbjct: 823  LEVHPSIGKLNKLFLLNLKNCKKLICFPSIIDMKALEILNFSSCSGLKKFPNIQGNMENL 882

Query: 496  -RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
              LYL  +AIEE+PSSI  LT L +LDL+ CK LK + TS CKL+SL  L L GC  LE 
Sbjct: 883  LELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSGCSKLES 942

Query: 555  FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD---NIGSLEY 611
            FPE+ E M++LK +  D TPI  LPSS E L GL +L +  C  L +L +   N+ SLE 
Sbjct: 943  FPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLILLNLRKCKNLVSLSNGMCNLTSLET 1002

Query: 612  LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR 671
            L  I++  S ++ LP         R+L S  C                +  LH    A+ 
Sbjct: 1003 L--IVSGCSQLNNLP---------RNLGSLQC----------------LAQLHADGTAIA 1035

Query: 672  EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ-SLPELPLCLKY- 729
            + P  I  L +L++L   G    + P  +  +     +H    N +   LP      +  
Sbjct: 1036 QPPDSIVLLRNLQVLIYPGCKILA-PNSLGSLFSFWLLHGNSPNGIGLRLPSSFSSFRSL 1094

Query: 730  --LHLIDCKMLQSLPVLPFC----LESLDLTGCNMLRSLP----ELPLCLQYLNLEDCNM 779
              L + DCK+++       C    L+ LDL+  N L S+P    EL   L+ L L  C  
Sbjct: 1095 SNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNFL-SIPAGISELT-NLKDLRLGQCQS 1152

Query: 780  LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSA 839
            L  +PELP  ++ +   NC  L      +  LQ L                         
Sbjct: 1153 LTGIPELPPSVRDIDAHNCTALLPGSSSVSTLQGLQ------------------------ 1188

Query: 840  AICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAIN----EKLSELRGSLI 895
               F F NC K     ++      L    H+ ++S      +  +    +KL E     I
Sbjct: 1189 ---FLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKLLENIAFSI 1245

Query: 896  VLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSK------KVDSDCFRY 949
            V PG+ IPDW  +Q+ GSSI IQLP      + +GFA C+VL+         ++SD F Y
Sbjct: 1246 VFPGTGIPDWIWHQNVGSSIKIQLPTDWYSDDFLGFALCSVLEHLPERIICHLNSDVFDY 1305

Query: 950  FYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGF-----PDGYH 1004
                   DL+          D G++  +  +++ S+ V LG++PC  +       P+ ++
Sbjct: 1306 ------GDLK----------DFGHDFHWTGNIVGSEHVWLGYQPCSQLRLFQFNDPNEWN 1349

Query: 1005 HTIATFKFFAERKFYK-----IKRCGLCPVYA 1031
            H   +F+  A  +F       +K+CG+C +YA
Sbjct: 1350 HIEISFE--AAHRFNSSASNVVKKCGVCLIYA 1379


>gi|147767848|emb|CAN75658.1| hypothetical protein VITISV_003715 [Vitis vinifera]
          Length = 2019

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 286/742 (38%), Positives = 411/742 (55%), Gaps = 68/742 (9%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVA----G 74
           KTT+ KA+++Q S++F+G  F+++VR  SE   GL  LQ+Q+L+  L  K  E++    G
Sbjct: 206 KTTITKALYNQISNQFQGVSFLANVREKSEYDFGLLQLQQQLLNDILKRKNREISNVHEG 265

Query: 75  PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRG 134
            N+    K  +   ++L+VLDDV+ + QL  L+G+ D FGQGSRI++TTRD+ +L+   G
Sbjct: 266 MNV---IKNELSLRRVLVVLDDVDNLRQLVHLVGKHDWFGQGSRILITTRDRHLLDA-HG 321

Query: 135 EEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLC 194
            +K  + +  L  +EA + F  + FK+N   ED    S  +V Y  G PL L++LGS LC
Sbjct: 322 VDKPYHEIEELNSKEALQLFSLYTFKQNFPQEDYKDLSDHIVKYATGLPLALQLLGSHLC 381

Query: 195 LKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVA 254
                 W   L  L R     + +I ++LKISF+ L P  + IFLDIACFF+G+DKDFV+
Sbjct: 382 -----EWESELCKLER---EPVPEIQNVLKISFHGLDPTQREIFLDIACFFKGKDKDFVS 433

Query: 255 SILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
            ILD  +        +L D+ L++I  N ++MHD++Q+MG QIVR++  K+PGK SRLW+
Sbjct: 434 RILDGCDFYAESGFRVLRDRCLMTILDNKIHMHDLIQQMGWQIVREQYHKKPGKWSRLWE 493

Query: 312 PKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
           P ++S VL  N GT+AIEGIFLD+S  K +     AF  M+ LRL K +    Y+     
Sbjct: 494 PNDVSHVLTRNTGTEAIEGIFLDMSTSKQMQFTTEAFKMMNKLRLLKVHQDAKYDSIVYS 553

Query: 372 SMSTE-EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
            M  E  ++  S+V      ++  ++LR LHWD YPL +LPSNF  KNLVELNLRCS ++
Sbjct: 554 WMPVEPSKVLLSQVHFCRDFEFPSQELRCLHWDGYPLESLPSNFCAKNLVELNLRCSNIK 613

Query: 431 QPWEGEKACVPSSIQNFKY---------------LSALSFKG-CQSLRSFPSNLH-FVCP 473
           Q W+ E       + N  Y               L  L+ +G C +L S P +++   C 
Sbjct: 614 QLWKTETLHKNLKVINLSYSEHLNKIPNPLGVPNLEILTLEGWCVNLESLPRSIYKLRCL 673

Query: 474 VTINFSYCVNLIEFPQISGKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
            T+  S CV+L  FP+I G +     LYL  +AI ++PSSI+ L  LE L L  C  LK 
Sbjct: 674 KTLCCSGCVSLSSFPEIMGNMENLRELYLDDTAIVKLPSSIKHLKGLEYLTLVKCDDLKT 733

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
           +  S C L SL  L    C  LE  PE L+ ++ L+ + S      +LPS    L GL  
Sbjct: 734 VPQSICNLTSLKLLDFSSCSKLEKLPEDLKSLKCLETL-SLHAVNCQLPS----LSGL-- 786

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
                C           SL  LY  L  ++    +  S  L N L+ LD S    ++   
Sbjct: 787 -----C-----------SLRKLY--LGRSNLTQGVIQSNNLLNSLKVLDLSRNNVIDKGI 828

Query: 651 RTFLLGLSAMGLLHISDYAVR--EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
              +  LS++  L++ +  +   EIP E+  LSSLEIL LS N+F S+PA I Q+S+L+ 
Sbjct: 829 LIRICHLSSLEELNLKNCNLMDGEIPSEVCQLSSLEILDLSWNHFNSIPASISQLSKLKA 888

Query: 709 IHLEDFNMLQSLPELPLCLKYL 730
           + L    MLQ +PELP  L+ L
Sbjct: 889 LGLSHCKMLQQIPELPSTLRLL 910



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 228/513 (44%), Gaps = 70/513 (13%)

Query: 486  EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
            EFP  S ++  L+     +E +PS+  C  +L  L+LR C  +K++  +    ++L  + 
Sbjct: 574  EFP--SQELRCLHWDGYPLESLPSNF-CAKNLVELNLR-CSNIKQLWKTETLHKNLKVIN 629

Query: 546  LLGCLNLEHFPEILE--KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLP 603
            L    +L   P  L    +E L  +      +  LP S   L  L+ L    C  L + P
Sbjct: 630  LSYSEHLNKIPNPLGVPNLEILT-LEGWCVNLESLPRSIYKLRCLKTLCCSGCVSLSSFP 688

Query: 604  DNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLL 663
            + +G++E L  +    +AI +LPSS+     L  L    C  L++ P++ +  L+++ LL
Sbjct: 689  EIMGNMENLRELYLDDTAIVKLPSSIKHLKGLEYLTLVKCDDLKTVPQS-ICNLTSLKLL 747

Query: 664  HISDYA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE 722
              S  + + ++P+++  L  LE L L   N + LP++   +  LR ++L   N+ Q +  
Sbjct: 748  DFSSCSKLEKLPEDLKSLKCLETLSLHAVNCQ-LPSL-SGLCSLRKLYLGRSNLTQGV-- 803

Query: 723  LPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC----LQYLNLEDCN 778
                     +    +L SL VL       DL+  N++     + +C    L+ LNL++CN
Sbjct: 804  ---------IQSNNLLNSLKVL-------DLSRNNVIDKGILIRICHLSSLEELNLKNCN 847

Query: 779  MLRSLPELPLC----LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPE 834
            ++       +C    L++L + + N   S+P  +  L +L A  L     H   LQ  PE
Sbjct: 848  LMDGEIPSEVCQLSSLEILDL-SWNHFNSIPASISQLSKLKALGL----SHCKMLQQIPE 902

Query: 835  SLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSEL---- 890
                        + L+L   A+N   A S       +  S    +E + + ++       
Sbjct: 903  ----------LPSTLRLL-DAHNSHCALSSPSSFLSSSFSKFQDFECSSSSQVYLCDSPY 951

Query: 891  ---RGSLIVLPG-SEIPDWFSNQSSGSSICIQLPPH-SSCRNLIGFAFCAV---LDSKKV 942
                G  IV+PG S IP+W  +Q+ G+ + I LP    + ++ +GFA C+    LD+K  
Sbjct: 952  YFGEGVCIVIPGISGIPEWIMDQNMGNHVTIDLPQDWYADKDFLGFALCSAYVPLDNKSE 1011

Query: 943  DSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNS 975
            D      F    +   EI++ +E  H +  + S
Sbjct: 1012 DD-----FEHGLEDKSEIQSENEPDHDEWAHKS 1039


>gi|298205188|emb|CBI17247.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 276/765 (36%), Positives = 400/765 (52%), Gaps = 95/765 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNI-- 77
           KTT+AK ++++FSHEFE   F+ +VR    T G   HLQ Q L   L  +      N+  
Sbjct: 90  KTTIAKVVYNRFSHEFEYMSFLENVREVGNTMGS-HHLQNQFLCDLLQVERNQNVSNVGQ 148

Query: 78  -PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
             +  K  +R  ++ IVLDD++   QL+ L+   D  G+GSR+++TTR+K +L+    E 
Sbjct: 149 GANTIKNVLRCKRVFIVLDDIDHSNQLEYLLRNRDWLGRGSRVIITTRNKHLLQ----ET 204

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
             +Y V  L  ++A E F  FAF++N   +D    S  VV+Y  G PL L+VLGS L  K
Sbjct: 205 DDVYEVEELNSKQARELFSLFAFRQNLPKQDFIDLSDRVVNYCHGLPLALKVLGSFLFNK 264

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
               W   L  L R  E E+  I D+LK+S++ L    + IFLDIAC F+G+DKDFV+ I
Sbjct: 265 AIPQWESELSKLER--ELEV-GISDVLKVSYDGLDYTQQEIFLDIACCFKGKDKDFVSRI 321

Query: 257 LDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           LD         +  L DK L+S+S N + MHD++Q+MG  I+R E   +P K  RLWDP 
Sbjct: 322 LDGCNFYAERGIRALCDKCLISLSENKILMHDLIQQMGWNIIRSEYLGDPTKWRRLWDPS 381

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           +I R  +   G   +E IFLDLS+   + +  + F  M  LRL K Y   +Y        
Sbjct: 382 DICRAFRMG-GMKNVEAIFLDLSRSTPLEVSTKIFAKMKKLRLLKIYSSGYYG------- 433

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
           + E+QL   KV LP    +   +LRYLHW+ YP ++LPSNF   NL+ELN++ S ++Q  
Sbjct: 434 TMEKQL---KVILPEDFQFPAHELRYLHWEGYPFKSLPSNFLGVNLIELNMKDSNIKQLM 490

Query: 434 EGEKA--------------------------------------CVPSSIQNFKYLSALSF 455
           +  +                                        V  SI + K L+ L+ 
Sbjct: 491 QRNERLEQLKFLNLSGSRQLTETSFSNMPNLETLILADCTSLNVVDPSIGDLKKLTVLNL 550

Query: 456 KGCQSLRSFPSNLHFVCPV-TINFSYCVNLIEFPQISGK----VTRLYLGQSAIEEVPSS 510
            GC++L S PS++ ++  +  +N   C NL EFP++ G     ++ L L    I+E+PSS
Sbjct: 551 LGCENLTSLPSSIQYLDSLEAMNLMTCSNLEEFPEMKGSPMKALSDLLLDGCGIKELPSS 610

Query: 511 IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYS 570
           IE LT L+ L L  CK L+ + +S C+L+SLV L L GC NL+ FPEI+E M+ L+ +  
Sbjct: 611 IELLTRLKRLYLSKCKNLRSLPSSICRLKSLVQLDLHGCSNLDTFPEIMEDMKCLESLDI 670

Query: 571 DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA 630
             + I ELPSS +NL  L  L + +C  L  LPD+I +L  +   L   S + + P +  
Sbjct: 671 RSSGIKELPSSIQNLKSLLRLDMSNC--LVTLPDSIYNLRSV--TLRGCSNLEKFPKNPE 726

Query: 631 LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
               +  LD SHC  +E                         IP EI  L+SLEIL LS 
Sbjct: 727 GFYSIVQLDFSHCNLMEG-----------------------SIPTEIWDLNSLEILNLSW 763

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
           N+  S+P+ I Q+ +L F+ +    MLQ +PELP  L+ +  + C
Sbjct: 764 NHMVSIPSGISQLCKLDFLDISHCEMLQDIPELPSSLRKIDALYC 808



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 131/535 (24%), Positives = 222/535 (41%), Gaps = 89/535 (16%)

Query: 551  NLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
            N++   +  E++E LK +  S    +TE  +SF N+P LE L + DC+ L+ +  +IG L
Sbjct: 485  NIKQLMQRNERLEQLKFLNLSGSRQLTE--TSFSNMPNLETLILADCTSLNVVDPSIGDL 542

Query: 610  EYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY 668
            + L  + L     ++ LPSS+   + L +++   C  LE FP      + A+  L +   
Sbjct: 543  KKLTVLNLLGCENLTSLPSSIQYLDSLEAMNLMTCSNLEEFPEMKGSPMKALSDLLLDGC 602

Query: 669  AVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCL 727
             ++E+P  I  L+ L+ LYLS   N  SLP+ I ++  L  + L   + L + PE+   +
Sbjct: 603  GIKELPSSIELLTRLKRLYLSKCKNLRSLPSSICRLKSLVQLDLHGCSNLDTFPEIMEDM 662

Query: 728  KYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQ----YLNLEDCNMLRSL 783
            K                  CLESLD+        + ELP  +Q     L L+  N L +L
Sbjct: 663  K------------------CLESLDIRS----SGIKELPSSIQNLKSLLRLDMSNCLVTL 700

Query: 784  PELPLCLQLLTVRNCNRLQSLP---EILLCLQELDASVLEKLSKHSPDLQWAPESLKS-- 838
            P+    L+ +T+R C+ L+  P   E    + +LD S    +    P   W   SL+   
Sbjct: 701  PDSIYNLRSVTLRGCSNLEKFPKNPEGFYSIVQLDFSHCNLMEGSIPTEIWDLNSLEILN 760

Query: 839  -------------AAIC----FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRL---- 877
                         + +C     + ++C  L        L  SL +I  +    L +    
Sbjct: 761  LSWNHMVSIPSGISQLCKLDFLDISHCEMLQDIPE---LPSSLRKIDALYCTKLEMLSSP 817

Query: 878  ----------GYEMAINEKLSELRGSLIVLPGS-EIPDWFSNQSSGSSICIQLPPHSSCR 926
                       +    NE L+   G +I++ G+  IP W  +Q  GS + I+ PP +   
Sbjct: 818  SSLLWSSLLKWFNPTSNEHLNCKEGKMIIILGNGGIPGWVLHQEIGSQVRIE-PPLNWYE 876

Query: 927  N--LIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLG-YNSRYIEDLID 983
            +   +GFAF  +          + +  +  +F L ++   +    D   +N   I +  +
Sbjct: 877  DDHFLGFAFFTLYRD-------YAHCTIPSRFSLRLRGDPDEVVGDCNDHNDSRIWNWCE 929

Query: 984  SDRVILGFKPCLNV------GFPDGYHHTIATFKFFAERKFYKIKRCGLCPVYAN 1032
             +R        L V        P+ YH     + F A      IKRCG+  +Y +
Sbjct: 930  CNRCYDDASDGLWVTLYPKNAIPNKYHRK-QPWHFLAAVDATNIKRCGVQLIYTH 983


>gi|297813715|ref|XP_002874741.1| hypothetical protein ARALYDRAFT_327329 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297320578|gb|EFH51000.1| hypothetical protein ARALYDRAFT_327329 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1212

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 335/1091 (30%), Positives = 523/1091 (47%), Gaps = 207/1091 (18%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
            D+V I+GI GM GIGKTTLA  ++ +    F+GSCF++++R NS  +G LE+L +++ ST
Sbjct: 196  DSVHIIGIVGMVGIGKTTLADCLYGRMRGRFDGSCFLTNIRENSGRSG-LEYLLQKLFST 254

Query: 65   TLSEK-LEVAGPNIPHFTKER-VRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
             L+++ LE+  P   H   ER ++  +LLIVLDDVN+  Q++ L+G    +  GSRI++T
Sbjct: 255  VLNDRDLEIGAPGNAHERFERRLKSKRLLIVLDDVNDEKQIRYLMGHCKWYQGGSRIIIT 314

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            TRD +++E  +G +  + ++N     EA + F   AF ++   ++    +  V+ Y KG+
Sbjct: 315  TRDCKLIETIKGRKYVLPKLND---REALKLFSLNAFNDSCPSKEFEGLTNMVLDYAKGH 371

Query: 183  PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
            PL L+VLGS LC +   +W   L  L   C S   DIY++L+ S+ +LT   K++FLDIA
Sbjct: 372  PLALKVLGSDLCERDNLYWEAKLDRLK--CRSH-GDIYEVLETSYEELTIEQKNVFLDIA 428

Query: 243  CFFEGEDKDFVASILDDSESDVLDI---LIDKSLVSISGNFLNMHDILQEMGRQI-VRQE 298
            CFF  E+ D+V S+L+    DV  +   L+DK L+++S N + MHD+LQ MG++I ++ E
Sbjct: 429  CFFRSENVDYVTSLLNSHGVDVSSVIKDLVDKCLITLSDNRIEMHDMLQTMGKEISLKAE 488

Query: 299  S------------EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR 346
            +              +     RLWD ++I  +L   +GTD I GIFLD SK++ + L  +
Sbjct: 489  TIGIRDFTWLSRHGNQCQWHIRLWDSEDICDILTKGQGTDKIRGIFLDTSKLRAMRLSAK 548

Query: 347  AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
            A   M NL+  K Y       +   S   E +    K+ L  GLDYLP +L YLHW  YP
Sbjct: 549  ALKGMYNLKYLKIY-------DSHCSRGCEVEF---KLHLRKGLDYLPNELTYLHWHGYP 598

Query: 407  LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS 466
            L+++P +F PKNLV+L L  S++ + W+ EK    + +  +  LS               
Sbjct: 599  LQSIPLDFDPKNLVDLKLPHSQLAEIWDDEK---DAGMLKWVDLSH-------------- 641

Query: 467  NLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGC 525
                    ++N   C+ L      +  + RL L G ++++++P++I  L  L  L+LR C
Sbjct: 642  --------SLNLHQCLGLAN----AQNLERLNLEGCTSLKKLPTTINGLEKLVYLNLRDC 689

Query: 526  KRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL 585
              L+ +     K +SL TLIL GC  L+ FP I E +E L     D T I  LP S E L
Sbjct: 690  TSLRSLPKGL-KTQSLQTLILSGCSRLKKFPLISENVEVL---LLDGTAIKSLPESIETL 745

Query: 586  PGLEVLFVEDCSKLDNL------------------------PDNIGSLEYLYYILAAASA 621
              L +L +++C KL +L                        P+    +E L  +L   +A
Sbjct: 746  RRLALLNLKNCKKLKHLSSDLYKLKCLQELILSGCSRLEVFPEIKEDMESLEILLMDDTA 805

Query: 622  ISQLPSSVALSNM----LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI 677
            I+++P  + LSN+    L    S     +   P T  LG S +  L++S  ++ ++P  I
Sbjct: 806  ITEMPKMMHLSNIQTFSLCGTSSQVSVSMFFMPPT--LGCSRLTDLYLSRCSLYKLPDNI 863

Query: 678  AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM 737
              LSSL+ L LSGNN E+LP              E FN L +L                 
Sbjct: 864  GGLSSLQSLCLSGNNIENLP--------------ESFNQLHNL----------------- 892

Query: 738  LQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRN 797
                                            ++ +L+ C ML+SLP LP  LQ L    
Sbjct: 893  --------------------------------KWFDLKFCKMLKSLPVLPQNLQYLDAHE 920

Query: 798  CNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANN 857
            C  L++L   L  L     +V E++  HS                F F+NC KLN  A +
Sbjct: 921  CESLETLENPLTPL-----TVGERI--HS---------------MFIFSNCYKLNQDAQS 958

Query: 858  KILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICI 917
             ++  + ++ + MA AS++  Y   I E L       I    ++IP WF +Q  G S+ I
Sbjct: 959  -LVGHARIKSQLMANASVKRYYRGFIPEPLVG-----ICYAATDIPSWFCHQRLGRSLEI 1012

Query: 918  QLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRY-FYVSFQFDLEIKTLSETKHVDLGYNS- 975
             LPPH    + +G A   V+     +    R+      +F+ +  + +       G+N  
Sbjct: 1013 PLPPHWCDTDFVGLALSVVVSFMDYEDSAKRFSVKCCGKFENQDGSFTRFDFTLAGWNEP 1072

Query: 976  ----RYIEDLIDSDRVILGFKPCLNV----GFPDGYHHTIATFKFFAERKFYKIK----- 1022
                 +    + SD V +G+  C +V    G      +T A+F+F+      + K     
Sbjct: 1073 CGSLSHEPRKLASDHVFMGYNSCFHVKNLHGESKNCCYTKASFEFYVTDDETRKKIETCE 1132

Query: 1023 --RCGLCPVYA 1031
              +CG+  VY 
Sbjct: 1133 VIKCGMSLVYV 1143


>gi|255555349|ref|XP_002518711.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223542092|gb|EEF43636.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1109

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 330/1030 (32%), Positives = 482/1030 (46%), Gaps = 206/1030 (20%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V+IVGIWGMGGIGKTTLA+AI+D+ SH+FE SCF+S++R   E    L  L+ ++ S+ L
Sbjct: 220  VRIVGIWGMGGIGKTTLARAIYDKISHQFESSCFLSNIREQLERCT-LPQLRDELFSSLL 278

Query: 67   SEKLEVAGPNIPH----FTKERVRRMKLLIVLDDVNEVGQLKRLI--GELDQFGQGSRIV 120
             +  E+  P+  +    F K+R+ R K+L+V+DD + + QL+ L+   E D FG GSRI+
Sbjct: 279  EK--EILTPSTLNLRLSFIKDRLCRKKVLVVIDDADSLTQLQELLLESEPDYFGSGSRII 336

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPED-LNWHSRSVVSYT 179
            +T+RDK+VL     +  KIY +  L+  EA + F   AFK+++   D     S  V+ Y 
Sbjct: 337  ITSRDKQVLRNIARD--KIYTMQKLKNHEALQLFSLNAFKQDYPTSDRCILQSERVIKYA 394

Query: 180  KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            KGNPL + VLGS+L  + +  W   L  L +I   EI ++   L+ S++ L    ++IFL
Sbjct: 395  KGNPLAIRVLGSALFNRSEEDWESALERLGKIPNKEIDNV---LRTSYDGLDSDEQNIFL 451

Query: 240  DIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
            DI CFF GE +  V  ILD    S   V+  LID+SL+++S  +L +HD+LQEMGR IV 
Sbjct: 452  DIVCFFRGEHRGLVTKILDGCYPSAHIVITTLIDRSLITVSYGYLKLHDLLQEMGRNIVL 511

Query: 297  QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLR 355
             ES K P   SRLW P+++  VLK NKGT+ IEGI LD+SK +  + L    F  MS LR
Sbjct: 512  NES-KIPESHSRLWIPEDVCYVLKENKGTEVIEGISLDISKARSELRLRSNTFARMSRLR 570

Query: 356  LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLP-NGLDYLPKKLRYLHWDTYPLRTLPSNF 414
                Y             S  ++    K+QL  +GL  LP +LR+LHW  +PL++LPSNF
Sbjct: 571  FLNLY------------RSPHDRDKKDKLQLSLDGLQTLPTELRHLHWSEFPLKSLPSNF 618

Query: 415  KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             P+NLV L+L  SK+++ W G        IQN   L  +   G + L   P         
Sbjct: 619  TPENLVVLSLPDSKLKKLWTG--------IQNLVKLKEIDLSGSEYLYRIPD-------- 662

Query: 475  TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
                                                +   T++E +DL GC+ L+ + +S
Sbjct: 663  ------------------------------------LSKATNIEKIDLWGCESLEEVHSS 686

Query: 535  FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
               L  L  L +  C NL   P          RI S+                L+V  V 
Sbjct: 687  IQYLNKLEFLDIGECYNLRRLP---------GRIDSE---------------VLKVFKVN 722

Query: 595  DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
            DC ++   P   G+LE L     A + ++   SS+ +S+ L  L   +C  L S P +F 
Sbjct: 723  DCPRIKRCPQFQGNLEELELDCTAITDVATTISSILISSTLVQLAVYNCGKLSSLPSSFY 782

Query: 655  LGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLED 713
                                     L SLE L L   +  ES P I++ M  L FI L +
Sbjct: 783  ------------------------KLKSLESLDLDNWSELESFPEILEPMINLEFITLRN 818

Query: 714  FNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLE------SLDLTGCNMLRSLP---- 763
               L+ LP     LK L  +D +   ++  +P  +E      +L L  C  L SLP    
Sbjct: 819  CRRLKRLPNSICNLKSLAYLDVEG-AAIKEIPSSIEHLILLTTLKLNDCKDLESLPCSIH 877

Query: 764  ELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLS 823
            +LP  LQ L L  C  LRSLPE PL L  L   NC  L+++                  +
Sbjct: 878  KLPQ-LQTLELYSCKSLRSLPEFPLSLLRLLAMNCESLETISI--------------SFN 922

Query: 824  KHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAI 883
            KH         +L+       F NCL+L+ KA                     LG    +
Sbjct: 923  KHC--------NLR----ILTFANCLRLDPKA---------------------LG---TV 946

Query: 884  NEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVD 943
                S      ++ PGSEIP WFS+QS GSS+ +Q P +   +     AFC V   K   
Sbjct: 947  ARAASSHTDFFLLYPGSEIPRWFSHQSMGSSVTLQFPVN--LKQFKAIAFCVVFKFKIPP 1004

Query: 944  SDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGY 1003
                 Y++++   +   K + +   +       Y    +++  V++  +   + G+ + Y
Sbjct: 1005 KKSGDYYFIARCVEDCDKAVFQPARL-----GSYTFSFVETTHVLIWHE---SPGYLNDY 1056

Query: 1004 HHTIATFKFF 1013
              TI++F F+
Sbjct: 1057 SGTISSFDFY 1066


>gi|147858727|emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera]
          Length = 1177

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 305/783 (38%), Positives = 428/783 (54%), Gaps = 90/783 (11%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S+ V+ VGIWGM GIGKTT+A+AI+D+   +F+G CF+ DVR +S+  G L +LQ+ +L
Sbjct: 213 GSNDVRFVGIWGMAGIGKTTIAEAIYDRIYTKFDGCCFLKDVREDSQRHG-LTYLQETLL 271

Query: 63  STTLSEKLEV-AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
           S  L     +  G N   F K R+   K+LIVLD+V    +L+ L+G  D FG GSRI++
Sbjct: 272 SRVLGGINNLNRGIN---FIKARLHSKKVLIVLDNVVHRQELEALVGSHDWFGPGSRIII 328

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTR+KR+L     E   IY V  LE++EA + FC +AF+  H  ED        V YT  
Sbjct: 329 TTREKRLL--IEQEMDAIYEVEKLEYDEALKLFCQYAFRYKHPTEDFMQLCHHAVDYTGS 386

Query: 182 NPLVLEVLGSSLCLKRKS--HWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            PL L+VLGS  CL RKS   W   L   N+    E+    ++LK SF+ L    K++FL
Sbjct: 387 LPLALKVLGS--CLYRKSIHEWKSELDKFNQFPNKEV---LNVLKTSFDGLDDNEKNMFL 441

Query: 240 DIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
           DIA F++GEDKDFV  +LD+    SE   +  L+DKSL++IS N L MHD+LQEMG +IV
Sbjct: 442 DIAFFYKGEDKDFVIEVLDNFFPVSE---IGNLVDKSLITISDNKLYMHDLLQEMGWEIV 498

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           RQES K+PGKRSRL   ++I  VL  NKGT+A+EG+  DLS  K +NL   AF  M+ LR
Sbjct: 499 RQESIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFDLSASKELNLSVDAFAKMNKLR 558

Query: 356 LFKFYVPKFYE-----IEKLPSMSTEEQLSY----------SKVQLPNGLDYLPKKLRYL 400
           L +FY  +FY       EK    ST +   +          SK+ L     +    LR L
Sbjct: 559 LLRFYNCQFYGSSEYLSEKELIASTHDARRWMGYDNSPYNDSKLHLSRDFKFPSNNLRSL 618

Query: 401 HWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALS------ 454
           HW  YPL++LPSNF P+ LVELN+  S ++Q WEG+KA          +   L+      
Sbjct: 619 HWHGYPLKSLPSNFHPEKLVELNMCYSLLKQLWEGKKAFEKLKFIKLSHSQHLTKTPDFS 678

Query: 455 ---------FKGCQSL-RSFPSNLHFVCPVTINFSYCVNLIEFPQISG----KVTRLYLG 500
                      GC SL +  PS       + +N   C  L +FP++       ++ + L 
Sbjct: 679 AAPKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLE 738

Query: 501 QSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILE 560
            +AI E+PSSI  L  L +L+LR C++L  +  S C+L SL TL L GC  L+  P+ L 
Sbjct: 739 GTAIRELPSSIGSLNRLVLLNLRNCEKLASLPQSICELISLQTLTLSGCSKLKKLPDDLG 798

Query: 561 KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAAS 620
           +++ L  +  D T I E+ SS   L  LE L +  C    +   N+ S        ++ +
Sbjct: 799 RLQCLVELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLISFR------SSPA 852

Query: 621 AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE--IPQEIA 678
           A  QLP                          FL GL ++  L++SD  + E  +P +++
Sbjct: 853 APLQLP--------------------------FLSGLYSLKSLNLSDCNLLEGALPSDLS 886

Query: 679 YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
            LSSLE LYL  N+F +LPA + ++S+LR + LE    L+SLPELP  ++YL+   C  L
Sbjct: 887 SLSSLENLYLDKNSFITLPASLSRLSRLRSLTLEHCKSLRSLPELPSSIEYLNAHSCTSL 946

Query: 739 QSL 741
           ++L
Sbjct: 947 ETL 949


>gi|255564976|ref|XP_002523481.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223537309|gb|EEF38940.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 944

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 255/627 (40%), Positives = 360/627 (57%), Gaps = 60/627 (9%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+ +G+WGMGG GKTT A+ +F++ S +F+  CF+++V   SE  G L+ LQ+Q+ S  L
Sbjct: 213 VRFLGLWGMGGAGKTTTAEVVFNRISTQFDSCCFLANVNEESERYGLLK-LQRQLFSKLL 271

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
            +        I  F K R++  K+LIVLDDVN + QL+ L GE + FG GSRI++T+RDK
Sbjct: 272 GQDNVNYAEGI--FDKSRLKHRKVLIVLDDVNNLRQLENLAGEHNWFGPGSRIILTSRDK 329

Query: 127 RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPE-DLNWHSRSVVSYTKGNPLV 185
            VL   + +   IY++  L+  EA + F   AF++  CP+ D    S+ V++Y KGNPL 
Sbjct: 330 DVL---KNKTDAIYKIEDLDHHEALQLFSLNAFRQE-CPKADYMKLSKRVINYAKGNPLG 385

Query: 186 LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF 245
           L+VLGS L  +    W   LH L R    EI ++   LK+S++ L    K IFLD+ACFF
Sbjct: 386 LKVLGSFLYQRNIKEWESALHKLERSTNKEIQNV---LKVSYDGLDDEEKDIFLDVACFF 442

Query: 246 EGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKE 302
            GED+DFV  IL+    S    + +L+ KSL++IS N L +H++LQ+MG  IVRQES KE
Sbjct: 443 NGEDRDFVTRILNGCGFSADIAISVLVSKSLLTISNNTLAIHNLLQQMGWGIVRQESTKE 502

Query: 303 PGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVP 362
           PG+RSRL   +++  VL  N GT+AIEGI+LD+SK + + L P+AF  M NLRL KF+  
Sbjct: 503 PGRRSRLCTSEDVVHVLSKNTGTEAIEGIYLDMSKSRKVYLSPKAFERMHNLRLLKFH-- 560

Query: 363 KFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
                      S      YSKV LP GL+ LP KL  LHW+ YPL++LP NF  + LVEL
Sbjct: 561 ----------HSFSPIAMYSKVYLPEGLESLPDKLSCLHWNGYPLKSLPFNFCAEYLVEL 610

Query: 423 NLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
           ++  S V+  WEG+        Q  K L++++    Q L   P           +FS  +
Sbjct: 611 SMPHSHVKFLWEGD--------QCLKKLNSINLSDSQHLIRLP-----------DFSEAL 651

Query: 483 NLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLV 542
           NL E+  + G ++        + +VPSSI  LT L++L+L+ CK L+ I  S   L+SL 
Sbjct: 652 NL-EYINLEGCIS--------LAQVPSSIGYLTKLDILNLKDCKELRSIP-SLIDLQSLR 701

Query: 543 TLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNL 602
            L L GC NL H  +    +E L     D T I ELP+S E+L  L    +E+C +LD  
Sbjct: 702 KLNLSGCSNLNHCQDFPRNIEEL---CLDGTAIEELPASIEDLSELTFWSMENCKRLDQN 758

Query: 603 PDNIGSLEYLYYI--LAAASAISQLPS 627
              + + +    I   A A+ I  LPS
Sbjct: 759 SCCLIAADAHKTIQRTATAAGIHSLPS 785



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 177/411 (43%), Gaps = 75/411 (18%)

Query: 665  ISDYAVREIPQEIAYL-SSLEILYLSGNNFESLPA--IIKQMSQLRFIHLEDFNMLQSLP 721
            I+ Y+   +P+ +  L   L  L+ +G   +SLP     + + +L   H    + ++ L 
Sbjct: 566  IAMYSKVYLPEGLESLPDKLSCLHWNGYPLKSLPFNFCAEYLVELSMPH----SHVKFLW 621

Query: 722  ELPLCLKYLHLIDCKMLQSLPVLP-----FCLESLDLTGCNMLRSLPELPLCLQYL---- 772
            E   CLK L+ I+    Q L  LP       LE ++L GC    SL ++P  + YL    
Sbjct: 622  EGDQCLKKLNSINLSDSQHLIRLPDFSEALNLEYINLEGC---ISLAQVPSSIGYLTKLD 678

Query: 773  --NLEDCNMLRSLPELP--LCLQLLTVRNCNRLQSLPEILLCLQEL--DASVLEKLSKHS 826
              NL+DC  LRS+P L     L+ L +  C+ L    +    ++EL  D + +E+L    
Sbjct: 679  ILNLKDCKELRSIPSLIDLQSLRKLNLSGCSNLNHCQDFPRNIEELCLDGTAIEELPASI 738

Query: 827  PDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEK 886
             DL        S    +   NC +L+  +   I AD+   I+  A A+            
Sbjct: 739  EDL--------SELTFWSMENCKRLDQNSCCLIAADAHKTIQRTATAA-----------G 779

Query: 887  LSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP--HSSCRNLIGFAFCAVLDSKKVDS 944
            +  L       PG+EIPDW   + +GSSI ++L P  H +    +GFA C V+       
Sbjct: 780  IHSLPSVSFGFPGTEIPDWLLYKETGSSITVKLHPNWHRNPSRFLGFAVCCVVK------ 833

Query: 945  DCFRYFY----VSFQFDLEIKTLSETKHVDLGY-----NSRYIEDLIDSDRVILGFKPCL 995
              F +F     +    +   KT  +  HV   +     N +   DL+ S  V +G+   +
Sbjct: 834  --FTHFIDINNIYVICECNFKTNHDDHHVVNCFLQGLNNGKDESDLVKSQHVYIGYDFGI 891

Query: 996  NVGFPDG------YHHTIATFKFFAER------KFYKIKRCGLCPVYANPS 1034
             +    G      YH+   TFKF+A++       + K+ +CG+  +YA  +
Sbjct: 892  YLRAVKGTYPGRLYHYEEVTFKFYAKKMVGHTVAWRKVDKCGVHLLYAQDA 942



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 4/129 (3%)

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
           L  L  + + D   L  LPD   +L   Y  L    +++Q+PSS+     L  L+   CK
Sbjct: 627 LKKLNSINLSDSQHLIRLPDFSEALNLEYINLEGCISLAQVPSSIGYLTKLDILNLKDCK 686

Query: 645 GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
            L S P   L+ L ++  L++S  +     Q+  +  ++E L L G   E LPA I+ +S
Sbjct: 687 ELRSIPS--LIDLQSLRKLNLSGCSNLNHCQD--FPRNIEELCLDGTAIEELPASIEDLS 742

Query: 705 QLRFIHLED 713
           +L F  +E+
Sbjct: 743 ELTFWSMEN 751


>gi|451798988|gb|AGF69192.1| TMV resistance protein N-like protein 6 [Vitis labrusca]
          Length = 1219

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 281/762 (36%), Positives = 400/762 (52%), Gaps = 105/762 (13%)

Query: 79   HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
            +F K+ +   K+LI+LDDV++  QL+ L G  + FG GSRI++TTRD+ +L     E   
Sbjct: 276  NFMKDVLHSRKVLIILDDVDQRQQLEDLAGYNNWFGLGSRIIITTRDRHLLTC--QEVDA 333

Query: 139  IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            IY V  L+ +EA + FC +AF+  H  ED        + YT G PL L+VLGSSL  K  
Sbjct: 334  IYEVKELDNDEALKLFCLYAFRHRHGTEDFRQLCGHALDYTSGLPLALKVLGSSLYTKGI 393

Query: 199  SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
              W   L+ L +    E+ ++   LK SF  L    ++IFLDIA F++G DKDFV  ILD
Sbjct: 394  HEWESELNKLKQFPNKEVQNV---LKTSFEGLDDNEQNIFLDIAFFYKGHDKDFVGDILD 450

Query: 259  DSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                     +  L DKSL++IS N L MHD+LQEMG +IVRQ+SE  PG+RSRL   ++I
Sbjct: 451  SCGFFFGIGIRNLEDKSLITISENKLCMHDLLQEMGWEIVRQKSEV-PGERSRLRVHEDI 509

Query: 316  SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF----------YVPKFY 365
            + VL  N GT+A+EGIFLDLS+ K +N    AFT M  LRL K           Y+ K  
Sbjct: 510  NHVLTTNTGTEAVEGIFLDLSESKELNFSIDAFTKMKRLRLLKICNVQIDRSLGYLSKKE 569

Query: 366  EIEKLPSMSTEEQLSYS--KVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELN 423
             I     + TE    Y+  K+ L     +L   LR L+W  YPL++ PSNF P+ LVELN
Sbjct: 570  LIAYTHDVWTERNYLYTQNKLHLYEDSKFLSNNLRDLYWHGYPLKSFPSNFHPEKLVELN 629

Query: 424  LRCSKVEQPWEGEK----------------------ACVPS-----------------SI 444
            +  S+++Q WEG+K                      + VP+                 SI
Sbjct: 630  MCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSGVPNLRRLILKGCTSLVEVHPSI 689

Query: 445  QNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR---LYLGQ 501
               K L  L+ +GC+ L+SF S++H      +  S C  L +FP++ G +     L L  
Sbjct: 690  GALKKLIFLNLEGCKKLKSFSSSIHMESLQILTLSGCSKLKKFPEVQGNMEHLPNLSLEG 749

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            +AI+ +P SIE LT L +L+L+ CK L+ +  S  KL+SL TLIL  C  L+  PEI E 
Sbjct: 750  TAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLKSLKTLILSNCTRLKKLPEIQEN 809

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDN-------------------- 601
            ME L  ++ D + I ELPSS   L GL  L +++C KL +                    
Sbjct: 810  MESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLGTLTLCGCS 869

Query: 602  ----LPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL-- 655
                LPD++GSL+ L  + A  S I ++P S+ L   L+ L  + CKG +S  R  +   
Sbjct: 870  ELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAGCKGGDSKSRNMVFSF 929

Query: 656  --------------GLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAI 699
                          GL ++ +L +    + E  +P ++  + SLE L LS N+F ++PA 
Sbjct: 930  HSSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSDLGSIPSLERLDLSRNSFITIPAS 989

Query: 700  IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
            +  +S+LR + LE    LQSLPELP  ++ L+   C  L++ 
Sbjct: 990  LSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTSLETF 1031


>gi|225460287|ref|XP_002279207.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1554

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 269/720 (37%), Positives = 394/720 (54%), Gaps = 74/720 (10%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNI-- 77
           KTT+AKAI+++ S +FEGS F++DVR  S+   GL  LQ Q+L  TL+   +    +I  
Sbjct: 229 KTTIAKAIYNEISCKFEGSSFLADVREQSKDNAGLLRLQNQLLDDTLAGTYKKKSSSIYG 288

Query: 78  -PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
             H  ++++R  ++L++LDDV+   QL  L GE + FG GSRI++TTR K ++    G  
Sbjct: 289 ATHEIRDKLRLKRVLVILDDVDGRRQLDYLAGECEWFGSGSRIIITTRHKDLV-AIDGAN 347

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
           K  Y    L  EEA + F  +AFK+N   E+      + V Y +G PL L VLGS+L  K
Sbjct: 348 KS-YEPRKLNDEEAIKLFSLYAFKQNVPRENYKNLCENAVKYAQGLPLALAVLGSTLSSK 406

Query: 197 RK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           R    W   L  L +    EI   Y++L+ SF+ L+     IFLDIACFF+G+D+DFV+ 
Sbjct: 407 RGIREWESELRKLEKEPNREI---YNVLRTSFDGLSRVEGEIFLDIACFFKGKDRDFVSR 463

Query: 256 ILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
           ILDD+E ++ + L ++ L++I  N + MHD++Q+MG ++VR++ + EPG++SRLWD  ++
Sbjct: 464 ILDDAEGEISN-LCERCLITILDNKIYMHDLIQQMGWEVVREKCQNEPGEQSRLWDLDDV 522

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
           S VL  N GT AIEG+F+D+S  + I      FT M+ LRL K +    Y+  K      
Sbjct: 523 SSVLTRNAGTKAIEGLFMDMSAQQEIQFTTETFTKMNKLRLLKIHQDAKYDHIK----EI 578

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
           +  + + +V LP  L     +LRYLHWD Y L+ LP NF PKNLVELNLRCS ++Q WEG
Sbjct: 579 DGDVHFPQVALPEDLKLPSFELRYLHWDGYSLKYLPPNFHPKNLVELNLRCSNIKQLWEG 638

Query: 436 EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT 495
            K      ++  K                           IN ++   L+EFP  S    
Sbjct: 639 NKV-----LKKLK--------------------------VINLNHSQRLMEFPSFS---- 663

Query: 496 RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
                             + +LE+L L GC  LKR+     +L+ L TL    C  LE+F
Sbjct: 664 -----------------MMPNLEILTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYF 706

Query: 556 PEILEKMEHLKRIYSDRTPITELPSS-FENLPGLEVLFVEDCSKLDNLPDNI--GSLEYL 612
           PEI   M++LK++    T I +LPSS  E+L GLE L +  C  L  LP+NI   SL  L
Sbjct: 707 PEIKYTMKNLKKLDLYGTAIEKLPSSSIEHLEGLEYLNLAHCKNLVILPENICLSSLRVL 766

Query: 613 YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD-YAVR 671
           +  L  +    ++  S    ++L  L  S C+ +E      +  LS++  L +S+ Y ++
Sbjct: 767 H--LNGSCITPRVIRSHEFLSLLEELSLSDCEVMEG-ALDHIFHLSSLKELDLSNCYLMK 823

Query: 672 E-IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
           E IP +I  LSSL+ L LSG N   +PA I  +S+L+F+ L     LQ   +LP  +++L
Sbjct: 824 EGIPDDIYRLSSLQALDLSGTNIHKMPASIHHLSKLKFLWLGHCKQLQGSLKLPSSVRFL 883



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/268 (40%), Positives = 153/268 (57%), Gaps = 30/268 (11%)

Query: 496  RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
            +L LG++AI E+ + IECL+ ++ L LR CKRL+ + +   KL+SL T    GC  L+ F
Sbjct: 1071 KLCLGETAINELLN-IECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSF 1129

Query: 556  PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL-YY 614
            PEI E M+ L+ +  D T + ELPSS ++L GL+ L +E+C  L N+PDNI +L  L   
Sbjct: 1130 PEITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETL 1189

Query: 615  ILAAASAISQLPSSVALSNMLR-----SLDSSHCKGLESFPR-TFL--LGLSAMGLLH-- 664
            I++  S +++LP ++     LR      LDS  C+ L SF    FL  L L    L+H  
Sbjct: 1190 IVSGCSKLNKLPKNLGSLTQLRLLCAARLDSMSCQ-LPSFSDLRFLKILNLDRSNLVHGA 1248

Query: 665  -ISD----YAVRE------------IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
              SD    Y++ E            IP EI YLSSL+ LYL GN+F S+P+ I Q+S+L+
Sbjct: 1249 IRSDISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALYLKGNHFSSIPSGIGQLSKLK 1308

Query: 708  FIHLEDFNMLQSLPELPLCLKYLHLIDC 735
             + L    MLQ +PELP  L+ L    C
Sbjct: 1309 ILDLSHCEMLQQIPELPSSLRVLDAHGC 1336



 Score = 40.4 bits (93), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 29/116 (25%)

Query: 725  LCLKYLHLIDCKMLQSLPVLPFCLESL---DLTGCNMLRSLPELPLCLQYLNLEDCNMLR 781
            LCL+     +CK L+SLP   + L+SL     +GC+ L+S PE+         ED  +LR
Sbjct: 1094 LCLR-----NCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFPEIT--------EDMKILR 1140

Query: 782  -------SLPELPLCLQ------LLTVRNCNRLQSLPEILLCLQELDASVLEKLSK 824
                   SL ELP  +Q       L + NC  L ++P+ +  L+ L+  ++   SK
Sbjct: 1141 ELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCSK 1196


>gi|359493556|ref|XP_003634626.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1148

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 266/773 (34%), Positives = 401/773 (51%), Gaps = 107/773 (13%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNI-- 77
           KTT+AK I++QF ++FE + F+ ++   S+  G L HLQ Q+L   L  +  +    I  
Sbjct: 209 KTTIAKVIYNQFFYQFEHTSFLENISEISKNQG-LLHLQNQLLCNILEVEENIYISAIGQ 267

Query: 78  -PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
             +  K  +R  ++ IVLDDV++  QL+ L+G  D  G GSR+++TTR+K +L   R +E
Sbjct: 268 GSNMIKNILRSKRVFIVLDDVDDSNQLESLVGNHDWLGNGSRVIITTRNKHLLTVQRVDE 327

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
             +Y V  L+FE+ +E F   AF++N   +D    S   V Y +G PL L++LGS L  K
Sbjct: 328 --LYEVEKLKFEDGYELFNWHAFRQNIPKQDFINLSYDAVCYCQGLPLALKILGSLLIDK 385

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
            +  W   L  L R  + +IH+I   LK SF+ L    K IFLDIAC F+G+ ++FV+ I
Sbjct: 386 TRPQWKSELKKLKREPDKKIHNI---LKRSFHGLDHTQKDIFLDIACCFKGKKRNFVSRI 442

Query: 257 LDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           LD     V   L  L DK L++I  N++NMHD++Q+MG +I+R +   EP K SRLWDP+
Sbjct: 443 LDGCNFYVERGLKDLSDKCLITILNNWINMHDLIQQMGWEIIRGKFPNEPSKWSRLWDPE 502

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFY-EIEKLPS 372
           +I R    ++    +E +FLDLS++K +  + +  + M+ LRL K Y  + Y  + K   
Sbjct: 503 DIERAFATSEAMKKMEAVFLDLSRLKQMQFNTKVLSKMNKLRLLKVYWRRHYGHVRKDYK 562

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
           ++  E     K+ LP   ++   +LRYL+W+ Y L++LPSNFK +NLV++ L  S + Q 
Sbjct: 563 LTLPENF---KLILPENFEFPSYELRYLYWERYSLKSLPSNFKGENLVKIKLPNSNIRQL 619

Query: 433 WEGEKAC---------------------------------------VPSSIQNFKYLSAL 453
           W+G K                                         + SSI+  K L+ L
Sbjct: 620 WQGNKCLGKLKVLDLSDSKQLIELPNFSNISNLEKLILHNCRSLDKIDSSIEVLKNLNVL 679

Query: 454 SFKGCQSLRSFPSNLHFVCPVTI-NFSYCVNLIEFPQISGKVTR----LYLGQSAIEEVP 508
               C+ L S PS + ++  + I N + C NL +FP+I     +    + L  + I+E+P
Sbjct: 680 DLSWCKKLTSLPSGMQYLDSLEILNLNGCSNLEKFPKIRWSFRKGLKEIRLDGTPIKELP 739

Query: 509 SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI 568
            SI+ LT +++L +  CK ++ + +S   L+SL  L L GC NLE FPEI E M  L+ +
Sbjct: 740 FSIDDLTLVKILSMGDCKNVRSLLSSIGSLKSLQLLYLQGCSNLETFPEITEDMASLELL 799

Query: 569 YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSS 628
               T I ELP + ++L  L +LFV  CS+L+  P                         
Sbjct: 800 SLSETAIKELPPTIQHLKQLRLLFVGGCSRLEKFP------------------------- 834

Query: 629 VALSNMLRSLDSSHCKGLESFPRTFL-LGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
                          K LES   + + L LS   L+   D A+   P EI  LS LEIL 
Sbjct: 835 ---------------KILESLKDSLINLDLSNRNLM---DGAI---PNEIWCLSLLEILN 873

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           L  NNF  +PA I Q+ +L  + +    MLQ  PE+PL LK++   DC  L++
Sbjct: 874 LRRNNFRHIPAAITQLRKLTLLKISHCKMLQGFPEVPLSLKHIEAHDCTSLET 926



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 187/464 (40%), Gaps = 133/464 (28%)

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEV--LDLRGCKRLKRISTSFCKLRSLVT 543
           +FP    K +RL+     IE   ++ E +  +E   LDL   K+++  +    K+  L  
Sbjct: 487 KFPNEPSKWSRLW-DPEDIERAFATSEAMKKMEAVFLDLSRLKQMQFNTKVLSKMNKLRL 545

Query: 544 LILLGCLNLEH----------------FPEILEKMEH-LKRIYSDRTPITELPSSFEN-- 584
           L +    +  H                 PE  E   + L+ +Y +R  +  LPS+F+   
Sbjct: 546 LKVYWRRHYGHVRKDYKLTLPENFKLILPENFEFPSYELRYLYWERYSLKSLPSNFKGEN 605

Query: 585 --------------------LPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAASAI 622
                               L  L+VL + D  +L  LP+  NI +LE L  IL    ++
Sbjct: 606 LVKIKLPNSNIRQLWQGNKCLGKLKVLDLSDSKQLIELPNFSNISNLEKL--ILHNCRSL 663

Query: 623 SQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSS 682
            ++ SS+ +   L  LD S CK L S                        +P  + YL S
Sbjct: 664 DKIDSSIEVLKNLNVLDLSWCKKLTS------------------------LPSGMQYLDS 699

Query: 683 LEILYLSG-NNFESLPAIIKQMSQ-LRFIHLEDFNMLQSLPELPLCLKYLHLI------D 734
           LEIL L+G +N E  P I     + L+ I L+       + ELP  +  L L+      D
Sbjct: 700 LEILNLNGCSNLEKFPKIRWSFRKGLKEIRLDG----TPIKELPFSIDDLTLVKILSMGD 755

Query: 735 CKMLQSLPVLPFCLESLDL---TGCNMLRSLPELP---LCLQYLNLEDCNMLRSLPELPL 788
           CK ++SL      L+SL L    GC+ L + PE+      L+ L+L +     ++ ELP 
Sbjct: 756 CKNVRSLLSSIGSLKSLQLLYLQGCSNLETFPEITEDMASLELLSLSET----AIKELPP 811

Query: 789 CLQ------LLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC 842
            +Q      LL V  C+RL+  P+IL                         ESLK + I 
Sbjct: 812 TIQHLKQLRLLFVGGCSRLEKFPKIL-------------------------ESLKDSLIN 846

Query: 843 FEFTNCLKLNGKANNKILADSLLRI--------RHM--AIASLR 876
            + +N   ++G   N+I   SLL I        RH+  AI  LR
Sbjct: 847 LDLSNRNLMDGAIPNEIWCLSLLEILNLRRNNFRHIPAAITQLR 890


>gi|359493561|ref|XP_002268895.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1080

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 300/869 (34%), Positives = 448/869 (51%), Gaps = 118/869 (13%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V++VGI+G+GGIGKTT+AK +++    +F G+ F+  V+  S+       L +++L  
Sbjct: 20  DDVRMVGIYGIGGIGKTTIAKMVYNDILCQFNGASFLEGVKNRSQCNNDRLQLLQELLHG 79

Query: 65  TLSE---KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
            +     KLE     + +  K R+   K+L+V  DV++  +++RL+   + FG GSRI++
Sbjct: 80  IMEGGHLKLESIYDGM-NMIKGRLGSKKVLVVFYDVDDSDKVQRLVRSYEWFGPGSRIII 138

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRDK++L+++       Y    LE +EA E F   AFK  +  ED    S  +V Y KG
Sbjct: 139 TTRDKQLLDEYGVHAS--YEAKVLEDKEAIELFSWHAFKVQNIREDYVDMSNRLVDYAKG 196

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL LEVLGSSL  K K  W   +  L +    +I+D+   LKIS + L      +FLDI
Sbjct: 197 LPLALEVLGSSLYNKTKDEWKSAIEKLKKNPNRKINDM---LKISLDGLDDSQVEVFLDI 253

Query: 242 ACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           ACF +GE KD +  ILDD     + +L D+ L++IS   + MHD++Q+MG  I+R   EK
Sbjct: 254 ACFLKGEAKDCILRILDDHAEYDIRVLRDRCLITISATRVQMHDLIQQMGWSIIR---EK 310

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
            P KR+RLWD  +I + L   +G + +E I  DLS+ K I ++ + + NM  LR  K Y 
Sbjct: 311 HPSKRTRLWDIDDIHKALSAQEGMEQVEAISYDLSRSKDIQVNKKVYENMKKLRFLKLYW 370

Query: 362 PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVE 421
             ++      SM+     +Y KV LP   ++  ++LRYL+W+ YPL+TLPSNF  +NLVE
Sbjct: 371 GDYH-----GSMTK----TY-KVFLPKDCEFPSQELRYLYWEAYPLQTLPSNFNGENLVE 420

Query: 422 LNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC 481
           L++R S ++Q W+G K     + QN K            L S P NL       +  ++C
Sbjct: 421 LHMRNSTIKQLWKGRKI----AHQNAK------------LSSMP-NLE-----ELYLAFC 458

Query: 482 VNLIEFPQISGKVTRL---YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
             L +FP+I G +  L   YLGQS I+E+PSSIE L  LE L L GC+   +   +F  L
Sbjct: 459 ERLKKFPEIRGNMGSLRILYLGQSGIKEIPSSIEYLPALEFLTLWGCRNFDKFQDNFGNL 518

Query: 539 R-----------------------SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
           R                       S   L L  C NLE+FPEI   M+ L+ ++ + T I
Sbjct: 519 RHRRFIQAKKADIQELPNSFGYLESPQNLCLDDCSNLENFPEI-HVMKRLEILWLNNTAI 577

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALSN 633
            ELP++F  L  L+ L++  CS  +  P+  N+GSL +L       +AI +LP S+    
Sbjct: 578 KELPNAFGCLEALQFLYLSGCSNFEEFPEIQNMGSLRFLRL---NETAIKELPCSIGHLT 634

Query: 634 MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD----YAVREIPQEIAYLSSLEILYLS 689
            LR L+  +CK L S P + + GL ++ +L+I+      A  EI +++ +L  L    LS
Sbjct: 635 KLRDLNLENCKNLRSLPNS-ICGLKSLEVLNINGCSNLVAFPEIMEDMKHLGEL---LLS 690

Query: 690 GNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI---DCKMLQSLP---- 742
                 LP  I+ +  LR + L +   L +LP     L +L  +   +C  L +LP    
Sbjct: 691 KTPITELPPSIEHLKGLRRLVLNNCENLVTLPNSIGNLTHLRSLCVRNCSKLHNLPDNLR 750

Query: 743 VLPFCLESLDLTGCNMLR-SLPELPLCLQYLNLED------------------------- 776
            L  CL  LDL GCN+++ ++P    CL  L   D                         
Sbjct: 751 SLQCCLRRLDLAGCNLMKGAIPSDLWCLSSLRFLDVSESPIPCIPTNIIQLSNLRTLRMN 810

Query: 777 -CNMLRSLPELPLCLQLLTVRNCNRLQSL 804
            C ML  +PELP  L++L    C  + +L
Sbjct: 811 HCQMLEEIPELPSRLEVLEAPGCPHVGTL 839



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 186/420 (44%), Gaps = 82/420 (19%)

Query: 385 QLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSI 444
           ++P+ ++YLP       W          NF        NLR  +  Q  + +   +P+S 
Sbjct: 486 EIPSSIEYLPALEFLTLWGCRNFDKFQDNFG-------NLRHRRFIQAKKADIQELPNSF 538

Query: 445 QNFKYLSALSFKGCQSLRSFPSNLH---------------------FVCPVTINFSY--- 480
              +    L    C +L +FP  +H                     F C   + F Y   
Sbjct: 539 GYLESPQNLCLDDCSNLENFPE-IHVMKRLEILWLNNTAIKELPNAFGCLEALQFLYLSG 597

Query: 481 CVNLIEFPQIS--GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
           C N  EFP+I   G +  L L ++AI+E+P SI  LT L  L+L  CK L+ +  S C L
Sbjct: 598 CSNFEEFPEIQNMGSLRFLRLNETAIKELPCSIGHLTKLRDLNLENCKNLRSLPNSICGL 657

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
           +SL  L + GC NL  FPEI+E M+HL  +   +TPITELP S E+L GL  L + +C  
Sbjct: 658 KSLEVLNINGCSNLVAFPEIMEDMKHLGELLLSKTPITELPPSIEHLKGLRRLVLNNCEN 717

Query: 599 LDNLPDNIGSLEYLYYI-LAAASAISQLPSSV-ALSNMLRSLDSSHCKGLESFPRTFLLG 656
           L  LP++IG+L +L  + +   S +  LP ++ +L   LR LD + C  ++         
Sbjct: 718 LVTLPNSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQCCLRRLDLAGCNLMKG-------- 769

Query: 657 LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM 716
                           IP ++  LSSL  L +S +    +P  I Q+S LR + +     
Sbjct: 770 ---------------AIPSDLWCLSSLRFLDVSESPIPCIPTNIIQLSNLRTLRMNH--- 811

Query: 717 LQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSL--PELPLCLQYLNL 774
                             C+ML+ +P LP  LE L+  GC  + +L  P  PL    LNL
Sbjct: 812 ------------------CQMLEEIPELPSRLEVLEAPGCPHVGTLSTPSSPLWSSLLNL 853



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 195/403 (48%), Gaps = 61/403 (15%)

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSI--ECLTDLEVLD--LRGCKRLKRISTSFCKLRS- 540
           EFP  S ++  LY     ++ +PS+   E L +L + +  ++   + ++I+    KL S 
Sbjct: 390 EFP--SQELRYLYWEAYPLQTLPSNFNGENLVELHMRNSTIKQLWKGRKIAHQNAKLSSM 447

Query: 541 --LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
             L  L L  C  L+ FPEI   M  L+ +Y  ++ I E+PSS E LP LE L +  C  
Sbjct: 448 PNLEELYLAFCERLKKFPEIRGNMGSLRILYLGQSGIKEIPSSIEYLPALEFLTLWGCRN 507

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
            D   DN G+L +  +I A  + I +LP+S       ++L    C  LE+FP   +  + 
Sbjct: 508 FDKFQDNFGNLRHRRFIQAKKADIQELPNSFGYLESPQNLCLDDCSNLENFPEIHV--MK 565

Query: 659 AMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNML 717
            + +L +++ A++E+P     L +L+ LYLSG +NFE  P  I+ M  LRF+ L +    
Sbjct: 566 RLEILWLNNTAIKELPNAFGCLEALQFLYLSGCSNFEEFPE-IQNMGSLRFLRLNE---- 620

Query: 718 QSLPELPLC------LKYLHLIDCKMLQSLPVLPFC----LESLDLTGCNMLRSLP---- 763
            ++ ELP        L+ L+L +CK L+SLP    C    LE L++ GC+ L + P    
Sbjct: 621 TAIKELPCSIGHLTKLRDLNLENCKNLRSLPN-SICGLKSLEVLNINGCSNLVAFPEIME 679

Query: 764 ----------------ELPLCLQYLN------LEDCNMLRSLPELP---LCLQLLTVRNC 798
                           ELP  +++L       L +C  L +LP        L+ L VRNC
Sbjct: 680 DMKHLGELLLSKTPITELPPSIEHLKGLRRLVLNNCENLVTLPNSIGNLTHLRSLCVRNC 739

Query: 799 NRLQSLPEIL----LCLQELDASVLEKLSKHSPDLQWAPESLK 837
           ++L +LP+ L     CL+ LD +    +    P   W   SL+
Sbjct: 740 SKLHNLPDNLRSLQCCLRRLDLAGCNLMKGAIPSDLWCLSSLR 782


>gi|296089535|emb|CBI39354.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 259/654 (39%), Positives = 359/654 (54%), Gaps = 66/654 (10%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V++VGIWGM GIGKTT+AK I+++   +FEG CF+S+VR  S   G L +LQ ++LS  L
Sbjct: 37  VRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREESYKHG-LPYLQMELLSQIL 95

Query: 67  SEKLEVAG--PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            E+   AG      +F K+ +   K+LI+LDDV++  QL+ L G  + FG GSRI++TTR
Sbjct: 96  KERKPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRQQLEDLAGYNNWFGLGSRIIITTR 155

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           D+ +L     E   IY V  L+ +EA + FC +AF+  H  ED        + YT G PL
Sbjct: 156 DRHLLTC--QEVDAIYEVKELDNDEALKLFCLYAFRHRHGTEDFRQLCGHALDYTSGLPL 213

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L+VLGSSL  K    W   L+ L +    E+ ++   LK SF  L    ++IFLDIA F
Sbjct: 214 ALKVLGSSLYTKGIHEWESELNKLKQFPNKEVQNV---LKTSFEGLDDNEQNIFLDIAFF 270

Query: 245 FEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           ++G DKDFV  ILD         +  L DKSL++IS N L MHD+LQEMG +IVRQ+SE 
Sbjct: 271 YKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISENKLCMHDLLQEMGWEIVRQKSEV 330

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF-- 359
            PG+RSRL   ++I+ VL  N GT+A+EGIFLDLS+ K +N    AFT M  LRL K   
Sbjct: 331 -PGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSESKELNFSIDAFTKMKRLRLLKICN 389

Query: 360 --------YVPKFYEIEKLPSMSTEEQLSYS--KVQLPNGLDYLPKKLRYLHWDTYPLRT 409
                   Y+ K   I     + TE    Y+  K+ L     +L   LR L+W  YPL++
Sbjct: 390 VQIDRSLGYLSKKELIAYTHDVWTERNYLYTQNKLHLYEDSKFLSNNLRDLYWHGYPLKS 449

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEK----------------------ACVPS----- 442
            PSNF P+ LVELN+  S+++Q WEG+K                      + VP+     
Sbjct: 450 FPSNFHPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSGVPNLRRLI 509

Query: 443 ------------SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
                       SI   K L  L+ +GC+ L+SF S++H      +  S C  L +FP+I
Sbjct: 510 LKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESLQILTLSGCSKLKKFPEI 569

Query: 491 SGKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL 547
              +     L+L  S I E+PSSI CL  L  L+L+ CK+L  +  SFC+L SL TL L 
Sbjct: 570 QENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLGTLTLC 629

Query: 548 GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDN 601
           GC  L+  P+ L  ++ L  + +D + I E+P S   L  L+ L +  C   D+
Sbjct: 630 GCSELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAGCKGGDS 683



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 112/255 (43%), Gaps = 31/255 (12%)

Query: 552 LEHFPEIL--EKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
           L+ FP     EK+  L   +S    + E    FE L  +++   +  +K    PD  G  
Sbjct: 447 LKSFPSNFHPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKT---PDFSGVP 503

Query: 610 EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA 669
                IL   +++ ++  S+     L  L+   CK L+SF  +  + + ++ +L +S  +
Sbjct: 504 NLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSS--IHMESLQILTLSGCS 561

Query: 670 -VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLK 728
            +++ P+    + SL  L+L G+    LP+ I  ++ L F++L++   L SLP+   C  
Sbjct: 562 KLKKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQ-SFC-- 618

Query: 729 YLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE---LPLCLQYLNLEDCNMLRSLPE 785
                    L SL  L  C       GC+ L+ LP+      CL  LN +   +    P 
Sbjct: 619 --------ELTSLGTLTLC-------GCSELKELPDDLGSLQCLAELNADGSGIQEVPPS 663

Query: 786 LPLC--LQLLTVRNC 798
           + L   LQ L++  C
Sbjct: 664 ITLLTNLQKLSLAGC 678


>gi|359496034|ref|XP_002277500.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1132

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 284/748 (37%), Positives = 398/748 (53%), Gaps = 113/748 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V++VGIWGMGGIGKTTLA+AI++Q S +FEG  ++ D  G      GL  LQ+++LS
Sbjct: 204 STDVRMVGIWGMGGIGKTTLAQAIYNQVSSQFEGCSYLEDA-GEDLRKRGLIGLQEKLLS 262

Query: 64  TTLS-EKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
             L  E +++ GP      K R+   ++ IVLD+V +   L+ L+G  D FGQGSRI++T
Sbjct: 263 QILGHENIKLNGPIS---LKARLCSREVFIVLDNVYDQDILECLVGSHDWFGQGSRIIIT 319

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TRDKR+L       + +Y V  L   EA E    +A K+    ++    S S+++Y +G 
Sbjct: 320 TRDKRLL--MSHGVRVVYEVKKLVHTEAIEFLGRYASKQQIVIDEFMELSNSIITYAQGL 377

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PLVL+VLGS L    K  W     +L+++ ++    I ++L+IS++ L  + K+IFLDIA
Sbjct: 378 PLVLKVLGSFLFSMSKHEWRS---ELDKLKDTPHGRIQEVLRISYDGLDDKEKNIFLDIA 434

Query: 243 CFFEGEDKDFVASILDDSES-DVLDI--LIDKSLVSISGN-FLNMHDILQEMGRQIVRQE 298
           CFF+GEDKD V  ILD      V  I  LIDKSL++IS N  + MHD+LQEMGR+I+RQ 
Sbjct: 435 CFFKGEDKDHVIKILDGCGFFAVCGIRGLIDKSLITISNNDKIVMHDLLQEMGRKIIRQT 494

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
           S KEPGKRSRLW  K+   VL  N GT  +EGIF +LS I+ I+   +AF  M  LRL K
Sbjct: 495 SPKEPGKRSRLWIYKDAYHVLSKNTGTQEVEGIFFNLSDIEEIHFTTKAFAGMDKLRLLK 554

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
           FY       +  PS ++ E  S  K +LP+                        +F PKN
Sbjct: 555 FY-------DYSPSTNS-ECTSKRKCKLPH------------------------DFSPKN 582

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
           LV+L+L CS V+Q W+G            K L  L F                    ++ 
Sbjct: 583 LVDLSLSCSDVKQLWKG-----------IKVLDKLKF--------------------MDL 611

Query: 479 SYCVNLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF 535
           S+   L+E P  SG   + +L L G + + EV  ++  L  L  L LR CK LK I  S 
Sbjct: 612 SHSKYLVETPNFSGISNLEKLDLTGCTYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNSI 671

Query: 536 CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
           CKL+SL T I  GC  +E+FPE    +E LK +Y+D T I+ LPSS  +L  L+VL    
Sbjct: 672 CKLKSLETFIFSGCSKVENFPENFGNLEQLKELYADETAISALPSSICHLRILQVLSFNG 731

Query: 596 CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
           C                     +AS ++ LP   + S                F  + L 
Sbjct: 732 CKG-----------------PPSASWLTLLPRKSSNSG--------------KFLLSPLS 760

Query: 656 GLSAMGLLHISDYAVREIP--QEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLED 713
           GL ++  L++ D  + E      +A LSSLE L LSGNNF SLP+ + Q+SQL  + L++
Sbjct: 761 GLGSLKELNLRDCNISEGADLSHLAILSSLEYLDLSGNNFISLPSSMSQLSQLVSLKLQN 820

Query: 714 FNMLQSLPELPLCLKYLHLIDCKMLQSL 741
              LQ+L ELP  +K +   +C  L+++
Sbjct: 821 CRRLQALSELPSSIKEIDAHNCMSLETI 848



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 153/585 (26%), Positives = 257/585 (43%), Gaps = 80/585 (13%)

Query: 493  KVTRLYLGQSAIEEVPSSIECLTDLEVL------DLRGCKRLKRISTSFCKL------RS 540
            +V  ++   S IEE+  + +    ++ L      D       +  S   CKL      ++
Sbjct: 523  EVEGIFFNLSDIEEIHFTTKAFAGMDKLRLLKFYDYSPSTNSECTSKRKCKLPHDFSPKN 582

Query: 541  LVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
            LV L L  C +++   + ++ ++ LK +  S    + E P+ F  +  LE L +  C+ L
Sbjct: 583  LVDLSL-SCSDVKQLWKGIKVLDKLKFMDLSHSKYLVETPN-FSGISNLEKLDLTGCTYL 640

Query: 600  DNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
              +   +G L  L ++ L     +  +P+S+     L +   S C  +E+FP  F   L 
Sbjct: 641  REVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKLKSLETFIFSGCSKVENFPENFG-NLE 699

Query: 659  AMGLLHISDYAVREIPQEIAYLSSLEILYLSG----NNFESLPAIIKQMSQLRFIHLEDF 714
             +  L+  + A+  +P  I +L  L++L  +G     +   L  + ++ S      L   
Sbjct: 700  QLKELYADETAISALPSSICHLRILQVLSFNGCKGPPSASWLTLLPRKSSNSGKFLLSPL 759

Query: 715  NMLQSLPELPLCLKYLHLIDCKM-----LQSLPVLPFCLESLDLTGCNMLRSLPELPLCL 769
            + L SL EL       +L DC +     L  L +L   LE LDL+G N + SLP      
Sbjct: 760  SGLGSLKEL-------NLRDCNISEGADLSHLAILS-SLEYLDLSGNNFI-SLPS----- 805

Query: 770  QYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDAS---VLEKLSKHS 826
                        S+ +L   + L  ++NC RLQ+L E+   ++E+DA     LE +S  S
Sbjct: 806  ------------SMSQLSQLVSL-KLQNCRRLQALSELPSSIKEIDAHNCMSLETISNRS 852

Query: 827  --PDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAIN 884
              P L+              F  CLK+    NN     S+L+     + + +       N
Sbjct: 853  LFPSLRHV-----------SFGECLKIKTYQNN---IGSMLQALATFLQTHKRSRYARDN 898

Query: 885  EKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAV--LDSKKV 942
             +   +  S +V PGSEIPDWFS QSSG+ + I+LPP+    N +GFA  AV   D    
Sbjct: 899  PESVTIEFSTVV-PGSEIPDWFSYQSSGNVVNIELPPNWFNSNFLGFALSAVFGFDPLPD 957

Query: 943  DSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDG 1002
             +   + F +   F  +    S   +V   YNS     LI+SD + LG+ P ++      
Sbjct: 958  YNPNHKVFCLFCIFSFQNSAASYRDNV-FHYNSG--PALIESDHLWLGYAPVVSSFKWHE 1014

Query: 1003 YHHTIATFKFFAERKFYKIKRCGLCPVYANPSETKDNTFTINFAT 1047
             +H  A F+ +   + + +KRCG+  VY++   + +N   I + +
Sbjct: 1015 VNHFKAAFQIYG--RHFVVKRCGIHLVYSSEDVSDNNPTMIQYIS 1057


>gi|298204609|emb|CBI23884.3| unnamed protein product [Vitis vinifera]
          Length = 1176

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 288/859 (33%), Positives = 426/859 (49%), Gaps = 109/859 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+AK ++++ S EFE   F+ ++ G      GL HLQ Q+L   L  ++      + H
Sbjct: 128 KTTIAKVVYNELSCEFECMSFLENI-GEVSNTQGLSHLQNQLLVDVLEGEVSQNMNGVAH 186

Query: 80  ---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
                K+ +   ++L+VLDDV+   QL+ L+G  +  G+GSR+++TTR+K VL   + + 
Sbjct: 187 KASMIKDILSSKRVLMVLDDVDHPSQLEYLLGHREWLGEGSRVIITTRNKHVLAVQKVD- 245

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
             +Y V GL FEE  E F  +AFK+N    D    +  VV Y +G PL L+VLGS L  K
Sbjct: 246 -NLYEVKGLNFEEDCELFSLYAFKQNLPKSDYRNLACRVVGYCQGLPLALKVLGSLLFNK 304

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
               W   LH L+R  E+EIH++   LK S++ L    K+IFLD+ACFF+GED+DFV+ I
Sbjct: 305 TIPEWESELHKLDREPEAEIHNV---LKRSYDGLDRTEKNIFLDVACFFKGEDRDFVSRI 361

Query: 257 LDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           LD  +      +  L DK L+++  N + MHD++Q MG +IVR++   EP K SRLWDP 
Sbjct: 362 LDGCDFHAKRGIRNLNDKCLITLPYNEIRMHDLIQHMGWEIVREKFPDEPNKWSRLWDPC 421

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           +  R L   +G   +E I LDLSK KG+ +    F   + LRL K +   F+   K   +
Sbjct: 422 DFERALTAYEGIKRVETISLDLSKSKGVCVSSNVFAKTTRLRLLKVH-SGFHIDHKYGDL 480

Query: 374 STEEQLSY--------SKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLR 425
            +EE++ Y        SK+QL  G  +   +LRYL WD YPL  LPSNF    LVEL+L 
Sbjct: 481 DSEEEMYYCYGVIAHASKMQLDRGFKFPSYELRYLCWDGYPLDFLPSNFDGGKLVELHLH 540

Query: 426 CSKVEQPWEGEK----------------------------------ACVP-----SSIQN 446
           CS +++ W G K                                   CV       S+ N
Sbjct: 541 CSNIKRLWLGNKDLERLKVIDLSYSRKLIQMSEFSRMPNLESLFLNGCVSLIDIHPSVGN 600

Query: 447 FKYLSALSFKGCQSLRSFPSNLHFVCPVTI-NFSYCVNLIEFPQISGKVT---RLYLGQS 502
            K L+ LS + C  L++ P ++  +  + I N SYC    +FP   G +    +L+L  +
Sbjct: 601 LKKLTTLSLRSCDKLKNLPDSIWDLESLEILNLSYCSKFEKFPGKGGNMKSLRKLHLKDT 660

Query: 503 AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM 562
           AI+++P SI  L  LE+LDL  C +                         E FPE    M
Sbjct: 661 AIKDLPDSIGDLESLEILDLSDCSK------------------------FEKFPEKGGNM 696

Query: 563 EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAI 622
           + L ++    T I +LP S  +L  LE L V   SK +  P+  G+++ L  +L   +AI
Sbjct: 697 KSLNQLLLRNTAIKDLPDSIGDLESLESLDVSG-SKFEKFPEKGGNMKSLNQLLLRNTAI 755

Query: 623 SQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSS 682
             LP S+     L SLD S C   E FP      + ++  L + + A++++P  I  L S
Sbjct: 756 KDLPDSIGDLESLESLDLSDCSKFEKFPEKG-GNMKSLKKLRLRNTAIKDLPDSIGDLKS 814

Query: 683 LEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC------LKYLHLIDC 735
           LE L LS  + FE  P     M +LR +HL+    + ++ +LP        LK L L DC
Sbjct: 815 LEFLDLSDCSKFEKFPEKGGNMKRLRELHLK----ITAIKDLPTNISRLKKLKRLVLSDC 870

Query: 736 K-MLQSLPVLPFC-LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLL 793
             + + L     C L+ L+++ C M   +  LP  L+ ++   C     L        LL
Sbjct: 871 SDLWEGLISNQLCNLQKLNISQCKMAGQILVLPSSLEEIDAYHCTSKEDLS------GLL 924

Query: 794 TVRNCNRLQSLPEILLCLQ 812
            + + N L+S  E L C +
Sbjct: 925 WLCHLNWLKSTTEELKCWK 943


>gi|357471111|ref|XP_003605840.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
 gi|355506895|gb|AES88037.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
          Length = 1264

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 343/1059 (32%), Positives = 492/1059 (46%), Gaps = 228/1059 (21%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
            KTT+A AIFD FS +FEG CF+ ++ G+     GL  L  ++L+  L EK  V    +  
Sbjct: 225  KTTIAAAIFDLFSSQFEGCCFLENI-GDESERHGLNFLHNKLLTMLLEEKENVHVGTVRI 283

Query: 79   --HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
              +++K R+   K+LIVLDDV  + QL  L+G     G GSR++VT RDK  L + R  E
Sbjct: 284  GFNYSKSRLSHKKVLIVLDDVRTIEQLDFLVGAHTCLGPGSRVIVTARDKHALIE-RAHE 342

Query: 137  KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH--SRSVVSYTKGNPLVLEVLGSSLC 194
              IY V  L F E+ + F   AFK+  CP D+ +   S SVV+Y  G PL L+VLGS   
Sbjct: 343  --IYEVKPLNFHESLQLFSLSAFKKV-CP-DIGYQQLSESVVNYAGGIPLALKVLGSLFS 398

Query: 195  LKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVA 254
             K K  W   +  L +I      +I +IL++S++ L    K IFLDIACF  G+D+  V 
Sbjct: 399  YKSKEIWQSTMTKLKKI---PCREIQNILRLSYDGLDDTEKEIFLDIACFLNGKDRQHVT 455

Query: 255  SILDDS---ESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQESEKEPGKRSRLW 310
             +LD         L+ L++K+L++ S N  + MH ++QEMGR+IVRQES K+PG+RSRL+
Sbjct: 456  RLLDACGFYAVPGLETLLEKALITFSNNNQVQMHALIQEMGREIVRQESTKDPGRRSRLY 515

Query: 311  DPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
            D +E+  VLK+N GT AIEGI LD+S+IK +NL    F  M NLR  KFY          
Sbjct: 516  DHEEVYDVLKNNMGTSAIEGISLDVSQIKDMNLSSDIFVKMINLRFLKFY---------- 565

Query: 371  PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
             S S E       V LP GL     KLRYLHW  YPL++LPS+F P+ LVEL +  S+V+
Sbjct: 566  -SRSGER----CSVSLPAGLKSFSNKLRYLHWSAYPLKSLPSSFSPEKLVELYMPNSRVK 620

Query: 431  QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP-----SNLHFVCPVTINFSYCVNLI 485
            + WEG        +Q+   L  +    C++L   P     SNL      T+N S CV L 
Sbjct: 621  RLWEG--------VQDLTNLKKMDLSCCENLIELPDFSMASNLQ-----TVNLSRCVRL- 666

Query: 486  EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
                                 V +SI  L  L  L+L  CK LK +  S   L SL  L 
Sbjct: 667  -------------------RHVHASILSLQKLVNLNLVWCKNLKSL-LSNTPLNSLRILE 706

Query: 546  LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
            L GC +L+ F    E+M +L       T I ELP S + L  L  L +  C +L NL   
Sbjct: 707  LYGCSSLKEFSVTSEEMTYLDL---RCTAINELPPSVKYLGRLMNLELSSCVRLRNL--- 760

Query: 606  IGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL-GLSAMGLLH 664
                                P+  +    L  L  S C  L++     L  GL ++G L 
Sbjct: 761  --------------------PNEFSCLKSLGRLVLSDCTLLDTSNLHLLFDGLRSLGYLC 800

Query: 665  ISDYA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL 723
            + +   + E+P  I+ LSSL  L LSG+N +++P  IK +SQ                  
Sbjct: 801  LDNCCNLTELPHNISLLSSLYYLSLSGSNVKNIPKSIKHLSQ------------------ 842

Query: 724  PLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSL 783
                                    LESLDL  C          + +QYL           
Sbjct: 843  ------------------------LESLDLCKC----------MSIQYL----------- 857

Query: 784  PELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICF 843
            PELP  +++L V NC  L++   +  C      ++ E L +H               +  
Sbjct: 858  PELPPSIEVLDVTNCTSLET---VFTC-----PAIDELLQEHK--------------VFI 895

Query: 844  EFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKL----SELRGSL----- 894
             F NC++LN  + N I+ D+ +R++  A   +    E + ++      SE   S      
Sbjct: 896  SFKNCVELNEYSRNGIMLDAQVRLKEAAYVDVSAKIEGSESDPCFFFKSEATSSYHHPPT 955

Query: 895  IVLPGSEIPDWFSNQSSGSSICIQLP-PHSSCRNLIGFAFCAVLDSK---------KVDS 944
            ++ PGS +PDWF  +S+ +SI I+L   HS   N+ GF FC +L            K+  
Sbjct: 956  VICPGSRVPDWFHYRSTEASITIELSVSHSPQSNIFGFIFCLILPQSLPNEKNLNWKIGC 1015

Query: 945  DCFRYFYVSFQFD--LEIKTLSETKHVDLGYNSRYIEDLID------SDRVILGFKPCLN 996
            +C+     + +        T   + HV L Y+  +  D+ +      ++     +KP L 
Sbjct: 1016 ECYMEGGENIRNTSMCSFATGLVSDHVYLWYDENFCFDMFNTTGKSRTNDDYSAYKPKL- 1074

Query: 997  VGFPDGYHHTIATFKFFAE---RKFYKIKRCGLCPVYAN 1032
                        +F+FF E   +    IK CG+C +Y +
Sbjct: 1075 ------------SFQFFVETEDKMNVVIKECGICQIYGS 1101


>gi|359493489|ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1092

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 291/751 (38%), Positives = 408/751 (54%), Gaps = 111/751 (14%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S+ V+ VGIWGM GIGKTT+A+AI+D+   +F+G CF+ DVR +S+  G L +LQ+ +L
Sbjct: 213 GSNDVRFVGIWGMAGIGKTTIAEAIYDRIYTKFDGCCFLKDVREDSQRHG-LTYLQETLL 271

Query: 63  STTLSEKLEV-AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
           S  L     +  G N   F K R+   K+LIVLD+V    +L+ L+G  D FG GSRI++
Sbjct: 272 SRVLGGINNLNRGIN---FIKARLHSKKVLIVLDNVVHRQELEALVGSHDWFGPGSRIII 328

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTR+KR+L     E   IY V  LE++EA + FC +AF+  H  ED        V YT  
Sbjct: 329 TTREKRLL--IEQEMDAIYEVEKLEYDEALKLFCQYAFRYKHPTEDFMQLCHHAVDYTGS 386

Query: 182 NPLVLEVLGSSLCLKRKS--HWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            PL L+VLGS  CL RKS   W   L   N+    E+    ++LK SF+ L    K++FL
Sbjct: 387 LPLALKVLGS--CLYRKSIHEWKSELDKFNQFPNKEV---LNVLKTSFDGLDDNEKNMFL 441

Query: 240 DIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
           DIA F++GEDKDFV  +LD+    SE   +  L+DKSL++IS N L MHD+LQEMG +IV
Sbjct: 442 DIAFFYKGEDKDFVIEVLDNFFPVSE---IGNLVDKSLITISDNKLYMHDLLQEMGWEIV 498

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           RQES K+PGKRSRL   ++I  VL  NKGT+A+EG+  DLS  K +NL   AF  M+ LR
Sbjct: 499 RQESIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFDLSASKELNLSVDAFAKMNKLR 558

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
           L +FY        K PS                        LR LHW  YPL++LPSNF 
Sbjct: 559 LLRFYNLHLSRDFKFPS----------------------NNLRSLHWHGYPLKSLPSNFH 596

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
           P+ LVELN+  S ++Q WEG+KA      +  K+                          
Sbjct: 597 PEKLVELNMCYSLLKQLWEGKKA-----FEKLKF-------------------------- 625

Query: 476 INFSYCVNLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
           I  S+  +L + P  S   K+ R+ L G +++ ++  SI  L +L  L+L GC +L+ + 
Sbjct: 626 IKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLENLP 685

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
            S C+L SL TL L GC  L+  P+ L +++ L  +  D T I E+ SS   L  LE L 
Sbjct: 686 QSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELNVDGTGIKEVTSSINLLTNLEALS 745

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
           +  C    +   N+ S        ++ +A  QLP                          
Sbjct: 746 LAGCKGGGSKSRNLISFR------SSPAAPLQLP-------------------------- 773

Query: 653 FLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIH 710
           FL GL ++  L++SD  + E  +P +++ LSSLE LYL  N+F +LPA + ++S+LR + 
Sbjct: 774 FLSGLYSLKSLNLSDCNLLEGALPSDLSSLSSLENLYLDKNSFITLPASLSRLSRLRSLT 833

Query: 711 LEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           LE    L+SLPELP  ++YL+   C  L++L
Sbjct: 834 LEHCKSLRSLPELPSSIEYLNAHSCTSLETL 864



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 209/500 (41%), Gaps = 81/500 (16%)

Query: 559  LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LA 617
             EK++ +K  +S    +T+ P  F   P L  + +  C+ L  L  +IG+L+ L ++ L 
Sbjct: 620  FEKLKFIKLSHSQH--LTKTPD-FSAAPKLRRIILNGCTSLVKLHPSIGALKELIFLNLE 676

Query: 618  AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI 677
              S +  LP S+     L++L  S C  L+  P   L  L  +  L++    ++E+   I
Sbjct: 677  GCSKLENLPQSICELISLQTLTLSGCSKLKKLPDD-LGRLQCLVELNVDGTGIKEVTSSI 735

Query: 678  AYLSSLEILYLSGN-----------NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC 726
              L++LE L L+G            +F S PA   Q+  L  ++                
Sbjct: 736  NLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQLPFLSGLY---------------S 780

Query: 727  LKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP------LCLQYLNLEDCNML 780
            LK L+L DC +L+          S          S   LP        L+ L LE C  L
Sbjct: 781  LKSLNLSDCNLLEGALPSDLSSLSSLENLYLDKNSFITLPASLSRLSRLRSLTLEHCKSL 840

Query: 781  RSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAA 840
            RSLPELP  ++ L   +C  L++L     C      S L  L                  
Sbjct: 841  RSLPELPSSIEYLNAHSCTSLETLS----CSSSTYTSKLGDLR----------------- 879

Query: 841  ICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGS 900
              F FTNC +L G+     + +++L    +A +  +L   +  +E+     G   ++PGS
Sbjct: 880  --FNFTNCFRL-GENQGSDIVETILEGTQLASSMAKL---LEPDERGLLQHGYQALVPGS 933

Query: 901  EIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEI 960
             IP WF++QS GS + ++LPPH      +G A C V + K         F ++   +   
Sbjct: 934  RIPKWFTHQSVGSKVIVELPPHWYNTKWMGLAACVVFNFKGAVDGYRGTFPLACFLNGRY 993

Query: 961  KTLSETKHVDLGYNSRYIEDLIDSDRVILGF--KPCLNVGFP----DGYHHTIATFKFF- 1013
             TLS+       +NS +   +I+SD     +  +  L   +P    +   + +A+F F  
Sbjct: 994  ATLSD-------HNSLWTSSIIESDHTWFAYISRAELEARYPPWTGELSDYMLASFLFLV 1046

Query: 1014 ---AERKFYKIKRCGLCPVY 1030
               A     ++K+CG+  VY
Sbjct: 1047 PEGAVTSHGEVKKCGVRLVY 1066


>gi|359495289|ref|XP_002276927.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1133

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 277/741 (37%), Positives = 391/741 (52%), Gaps = 84/741 (11%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V++VGIWGMGGIGKTTLA+A+++Q SH+FE  CF+ +V    E    L  LQK+ LS  L
Sbjct: 242 VRMVGIWGMGGIGKTTLARAVYNQISHQFEACCFLENVSDYLEKQDFLS-LQKKYLSQLL 300

Query: 67  -SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
             E L   G       K  +   K+LIV+DDVN    L+ LIG+   FG GSRI++TTR+
Sbjct: 301 EDENLNTKGCIS---IKALLCSKKVLIVIDDVNNSKILEDLIGKHGWFGIGSRIIITTRN 357

Query: 126 KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
           K++L      E  +Y+   L  + A E F  +AFK+ H  +D    S+ +V Y +G PL 
Sbjct: 358 KQLLVTHGVNE--VYQAEKLNDDNAVELFSRYAFKKAHPIDDYVELSQCIVVYAQGLPLA 415

Query: 186 LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF 245
           L VLGS L  K K  W   L  L +I + EI D+   L++SF+ L    + IFLDIACFF
Sbjct: 416 LRVLGSFLFDKSKRQWESQLDKLKKIPKKEIQDV---LRVSFDGLEDNERDIFLDIACFF 472

Query: 246 EGEDKDFVASILDDSE--SDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKE 302
           +G DKD+V  I        D+ + +LI+KSL+S+  N L MH++LQ+MGR+IVR+ S KE
Sbjct: 473 QGHDKDYVMEIFRSCGFFPDIGIRVLIEKSLISVVENKLMMHNLLQKMGREIVREASPKE 532

Query: 303 PGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVP 362
           PGKRSRLW   +++ VL    GT+ +EGI LDLS +K IN    AF  M+ LRL K Y  
Sbjct: 533 PGKRSRLWIHDDVNHVLTKKTGTEEVEGISLDLSSLKEINFTNEAFAPMNRLRLLKVYTL 592

Query: 363 KFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
            F           + +    KV    G  +  ++LR+L+W  YPL++LP++F  KNLV+L
Sbjct: 593 NFL---------MDSKREKCKVHFSRGFKFHCEELRHLYWYEYPLKSLPNDFNLKNLVDL 643

Query: 423 NLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
           ++  S+++Q W+G K      ++N K+   ++ K  + L   P           +FS   
Sbjct: 644 SMPYSQIKQLWKGTKV-----LENLKF---MNLKHSKFLTETP-----------DFSRVT 684

Query: 483 NLIEFPQISGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSL 541
           NL           RL L G  ++ +V  S+  L  L  L L+ CK LK + +  C L+ L
Sbjct: 685 NL----------ERLVLKGCISLYKVHPSLGDLNKLNFLSLKNCKMLKSLPSCICDLKCL 734

Query: 542 VTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDN 601
              IL GC   E  PE    +E LK   +D T I  LPSSF  L  LE+L  E C     
Sbjct: 735 EVFILSGCSKFEELPENFGNLEMLKEFCADGTAIRVLPSSFSLLRNLEILSFERCKG--- 791

Query: 602 LPDNIGSLEYLYYILAAASAISQLP-SSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAM 660
                             S    LP  S   SN + S  SS             L   ++
Sbjct: 792 ---------------PPPSTSWWLPRRSSNFSNFVLSPLSS----------LSSLKTLSL 826

Query: 661 GLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSL 720
              +ISD A  +    + +LSSLE L LS NNF +LP+ I ++  L+ + LE+   LQ+L
Sbjct: 827 SACNISDGATLD---SLGFLSSLEDLDLSENNFVTLPSNISRLPHLKMLGLENCKRLQAL 883

Query: 721 PELPLCLKYLHLIDCKMLQSL 741
           PELP  ++ +   +C  L+++
Sbjct: 884 PELPTSIRSIMARNCTSLETI 904



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 179/463 (38%), Gaps = 66/463 (14%)

Query: 575  ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSN 633
            +TE P  F  +  LE L ++ C  L  +  ++G L  L ++ L     +  LPS +    
Sbjct: 674  LTETPD-FSRVTNLERLVLKGCISLYKVHPSLGDLNKLNFLSLKNCKMLKSLPSCICDLK 732

Query: 634  MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF 693
             L     S C   E  P  F   L  +        A+R +P   + L +LEIL  S    
Sbjct: 733  CLEVFILSGCSKFEELPENFG-NLEMLKEFCADGTAIRVLPSSFSLLRNLEIL--SFERC 789

Query: 694  ESLPAIIKQMSQLRFIHLEDF---NMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLES 750
            +  P         R  +  +F    +        L L   ++ D   L SL  L   LE 
Sbjct: 790  KGPPPSTSWWLPRRSSNFSNFVLSPLSSLSSLKTLSLSACNISDGATLDSLGFLS-SLED 848

Query: 751  LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
            LDL+  N + +LP              N+ R LP L    ++L + NC RLQ+LPE+   
Sbjct: 849  LDLSENNFV-TLPS-------------NISR-LPHL----KMLGLENCKRLQALPEL--- 886

Query: 811  LQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHM 870
                                  P S++S        NC  L    +N+  +  L+ +R  
Sbjct: 887  ----------------------PTSIRSIMA----RNCTSLE-TISNQSFSSLLMTVR-- 917

Query: 871  AIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIG 930
                L+      IN     +     V+ GS IPDW   QSSGS +  +LPP+    N +G
Sbjct: 918  ----LKEHIYCPINRDGLLVPALSAVVFGSRIPDWIRYQSSGSEVKAELPPNWFDSNFLG 973

Query: 931  FAFCAVLDSKKVD-SDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVIL 989
             A C V   + V  +D F  F+ S        +   +   D+     +++  ++SD + L
Sbjct: 974  LALCVVTVPRLVSLADFFGLFWRSCTL-FYSTSSHASSSFDVYTYPNHLKGKVESDHLWL 1032

Query: 990  GFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGLCPVYAN 1032
             + P  +        H  A+F+     +   IK CG+  VY N
Sbjct: 1033 VYVPLPHFINWQQVTHIKASFRITTFMRLNVIKECGIGLVYVN 1075


>gi|296089531|emb|CBI39350.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 261/643 (40%), Positives = 354/643 (55%), Gaps = 71/643 (11%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V++VGIWGM GIGKTT+AK I+++   +FEG CF+S+VR  S    GL +LQ ++LS  L
Sbjct: 112 VRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREES-YKHGLPYLQMELLSQIL 170

Query: 67  SEKLEVAG--PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            E+   AG      +F K+ +   K+LI+LDDV++  QL+ L G+ + FG GSRI++TTR
Sbjct: 171 KERNPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRKQLEDLAGDNNWFGSGSRIIITTR 230

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           D+ +L     E   IY V  L+ +EA + FC +AF+  H  ED        + YT G PL
Sbjct: 231 DRHLLTC--QEVDAIYEVKELDNDEALKLFCLYAFRHKHGTEDFRQLCGHALDYTSGLPL 288

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L+VLGSSL  K    W   L  L +    E+ ++   LK SF  L    ++IFLDIA F
Sbjct: 289 ALKVLGSSLYTKGIHEWKSELDKLKQFPNKEVQNV---LKTSFEGLDDNEQNIFLDIAFF 345

Query: 245 FEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           ++G DKDFV  ILD         +  L DKSL++IS N L MHD+LQEMG +IVRQ+SE 
Sbjct: 346 YKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISENKLCMHDLLQEMGWEIVRQKSEV 405

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
            PG+RSRL   ++I+ VL  N GT+A+EGIFLDLS  K +N    AFT M  LRL K   
Sbjct: 406 -PGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSASKELNFSIDAFTKMKRLRLLKI-- 462

Query: 362 PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVE 421
                                 VQ+   L YL KK   L+W  YPL++ PSNF P+ LVE
Sbjct: 463 --------------------CNVQIDRSLGYLSKK-EDLYWHGYPLKSFPSNFHPEKLVE 501

Query: 422 LNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC 481
           LN+  S+++QPWEG+K                   G + L+S            I  S+ 
Sbjct: 502 LNMCFSRLKQPWEGKK-------------------GFEKLKS------------IKLSHS 530

Query: 482 VNLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
            +L + P  SG   + RL L G +++ EV  SI  L  L  L+L GCK+LK  S+S   +
Sbjct: 531 QHLTKIPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSI-HM 589

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
            SL  L L GC  L+ FPEI E ME L  ++ D + I ELPSS   L GL  L +++C K
Sbjct: 590 ESLQILTLSGCSKLKKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKK 649

Query: 599 LDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDS 640
           L +LP +   L  L  + L   S +  LP ++     L  L++
Sbjct: 650 LASLPQSFCELTSLRTLTLCGCSELKDLPDNLGSLQCLTELNA 692



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 15/256 (5%)

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           V  ++L  SA +E+  SI+  T ++ L L     ++ I  S   L     L   G   L+
Sbjct: 431 VEGIFLDLSASKELNFSIDAFTKMKRLRLLKICNVQ-IDRSLGYLSKKEDLYWHG-YPLK 488

Query: 554 HFPEIL--EKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
            FP     EK+  L   +S      E    FE L  +++   +  +K+   PD  G    
Sbjct: 489 SFPSNFHPEKLVELNMCFSRLKQPWEGKKGFEKLKSIKLSHSQHLTKI---PDFSGVPNL 545

Query: 612 LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-V 670
              IL   +++ ++  S+     L  L+   CK L+SF  +  + + ++ +L +S  + +
Sbjct: 546 RRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSS--IHMESLQILTLSGCSKL 603

Query: 671 REIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC---- 726
           ++ P+    + SL  L+L G+    LP+ I  ++ L F++L++   L SLP+   C    
Sbjct: 604 KKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQ-SFCELTS 662

Query: 727 LKYLHLIDCKMLQSLP 742
           L+ L L  C  L+ LP
Sbjct: 663 LRTLTLCGCSELKDLP 678



 Score = 40.4 bits (93), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 17/132 (12%)

Query: 700 IKQMSQLRFIHLEDFNMLQSLPELPL--CLKYLHLIDCKMLQSLPVLPFCLESLD---LT 754
           I  + +L F++LE    L+S         L+ L L  C  L+  P +   +ESL    L 
Sbjct: 563 IGALKKLIFLNLEGCKKLKSFSSSIHMESLQILTLSGCSKLKKFPEIQENMESLMELFLD 622

Query: 755 GCNMLRSLPELPLCLQ---YLNLEDCNMLRSLPELPLC----LQLLTVRNCNRLQSLPE- 806
           G  ++  LP    CL    +LNL++C  L SLP+   C    L+ LT+  C+ L+ LP+ 
Sbjct: 623 GSGIIE-LPSSIGCLNGLVFLNLKNCKKLASLPQ-SFCELTSLRTLTLCGCSELKDLPDN 680

Query: 807 --ILLCLQELDA 816
              L CL EL+A
Sbjct: 681 LGSLQCLTELNA 692


>gi|296089437|emb|CBI39256.3| unnamed protein product [Vitis vinifera]
          Length = 1486

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 279/786 (35%), Positives = 399/786 (50%), Gaps = 137/786 (17%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNI-- 77
           KTT+AKAI+++ S +FEGS F++DVR  S+   GL  LQ Q+L  TL+   +    +I  
Sbjct: 85  KTTIAKAIYNEISCKFEGSSFLADVREQSKDNAGLLRLQNQLLDDTLAGTYKKKSSSIYG 144

Query: 78  -PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
             H  ++++R  ++L++LDDV+   QL  L GE + FG GSRI++TTR K ++    G  
Sbjct: 145 ATHEIRDKLRLKRVLVILDDVDGRRQLDYLAGECEWFGSGSRIIITTRHKDLV-AIDGAN 203

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
           K  Y    L  EEA + F  +AFK+N   E+      + V Y +G PL L VLGS+L  K
Sbjct: 204 KS-YEPRKLNDEEAIKLFSLYAFKQNVPRENYKNLCENAVKYAQGLPLALAVLGSTLSSK 262

Query: 197 RK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           R    W   L  L +    EI   Y++L+ SF+ L+     IFLDIACFF+G+D+DFV+ 
Sbjct: 263 RGIREWESELRKLEKEPNREI---YNVLRTSFDGLSRVEGEIFLDIACFFKGKDRDFVSR 319

Query: 256 ILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
           ILDD+E ++ + L ++ L++I  N + MHD++Q+MG ++VR++ + EPG++SRLWD  ++
Sbjct: 320 ILDDAEGEISN-LCERCLITILDNKIYMHDLIQQMGWEVVREKCQNEPGEQSRLWDLDDV 378

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
           S VL  N GT AIEG+F+D+S  + I      FT M+ LRL K +    Y+  K      
Sbjct: 379 SSVLTRNAGTKAIEGLFMDMSAQQEIQFTTETFTKMNKLRLLKIHQDAKYDHIK----EI 434

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
           +  + + +V LP  L     +LRYLHWD Y L+ LP NF PKNLVELNLRCS ++Q WEG
Sbjct: 435 DGDVHFPQVALPEDLKLPSFELRYLHWDGYSLKYLPPNFHPKNLVELNLRCSNIKQLWEG 494

Query: 436 EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT 495
            K      ++  K                           IN ++   L+EFP  S    
Sbjct: 495 NKV-----LKKLK--------------------------VINLNHSQRLMEFPSFS---- 519

Query: 496 RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
                             + +LE+L L GC  LKR+     +L+ L TL    C  LE+F
Sbjct: 520 -----------------MMPNLEILTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYF 562

Query: 556 PEILEKMEHLKRIYSDRTPITELPSS-FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
           PEI   M++LK++    T I +LPSS  E+L GLE L +  C  L  LP+NI SL +L +
Sbjct: 563 PEIKYTMKNLKKLDLYGTAIEKLPSSSIEHLEGLEYLNLAHCKNLVILPENICSLRFLKF 622

Query: 615 I-LAAASAISQLPSSV-------------------ALSNMLRSLDSSHCKGLESFPRTF- 653
           + + A S + +L  S+                    LS  L SL   H  G    PR   
Sbjct: 623 LNVNACSKLHRLMESLESLQCLEELYLGWLNCELPTLSG-LSSLRVLHLNGSCITPRVIR 681

Query: 654 -------------------------LLGLSAMGLLHISD-YAVRE-IPQEIAYLSSLEIL 686
                                    +  LS++  L +S+ Y ++E IP +I  LSSL+ L
Sbjct: 682 SHEFLSLLEELSLSDCEVMEGALDHIFHLSSLKELDLSNCYLMKEGIPDDIYRLSSLQAL 741

Query: 687 YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF 746
            LSG N   +PA I  +S+L+F                     L L  CK LQ    LP 
Sbjct: 742 DLSGTNIHKMPASIHHLSKLKF---------------------LWLGHCKQLQGSLKLPS 780

Query: 747 CLESLD 752
            +  LD
Sbjct: 781 SVRFLD 786



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/268 (40%), Positives = 153/268 (57%), Gaps = 30/268 (11%)

Query: 496  RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
            +L LG++AI E+ + IECL+ ++ L LR CKRL+ + +   KL+SL T    GC  L+ F
Sbjct: 1003 KLCLGETAINELLN-IECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSF 1061

Query: 556  PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL-YY 614
            PEI E M+ L+ +  D T + ELPSS ++L GL+ L +E+C  L N+PDNI +L  L   
Sbjct: 1062 PEITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETL 1121

Query: 615  ILAAASAISQLPSSVALSNMLR-----SLDSSHCKGLESFPR-TFL--LGLSAMGLLH-- 664
            I++  S +++LP ++     LR      LDS  C+ L SF    FL  L L    L+H  
Sbjct: 1122 IVSGCSKLNKLPKNLGSLTQLRLLCAARLDSMSCQ-LPSFSDLRFLKILNLDRSNLVHGA 1180

Query: 665  -ISD----YAVRE------------IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
              SD    Y++ E            IP EI YLSSL+ LYL GN+F S+P+ I Q+S+L+
Sbjct: 1181 IRSDISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALYLKGNHFSSIPSGIGQLSKLK 1240

Query: 708  FIHLEDFNMLQSLPELPLCLKYLHLIDC 735
             + L    MLQ +PELP  L+ L    C
Sbjct: 1241 ILDLSHCEMLQQIPELPSSLRVLDAHGC 1268



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 111/280 (39%), Gaps = 58/280 (20%)

Query: 561 KMEHLKRIYSD-RTPITELPSSFENLPGLEVLFVE-DCSKLDNLPDNIGSLEYLYYILAA 618
           K +H+K I  D   P   LP   + LP  E+ ++  D   L  LP N    + L  +   
Sbjct: 427 KYDHIKEIDGDVHFPQVALPEDLK-LPSFELRYLHWDGYSLKYLPPNFHP-KNLVELNLR 484

Query: 619 ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIA 678
            S I QL     +   L+ ++ +H + L  FP                           +
Sbjct: 485 CSNIKQLWEGNKVLKKLKVINLNHSQRLMEFP-------------------------SFS 519

Query: 679 YLSSLEILYLSGN-NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM 737
            + +LEIL L G  + + LP  I ++  L+ +   D + L+  PE+   +K L       
Sbjct: 520 MMPNLEILTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYFPEIKYTMKNL------- 572

Query: 738 LQSLPVLPFCLESLDLTGCNMLRSLPELPL----CLQYLNLEDCNMLRSLPELPLC---- 789
                      + LDL G   +  LP   +     L+YLNL  C  L  LPE  +C    
Sbjct: 573 -----------KKLDLYG-TAIEKLPSSSIEHLEGLEYLNLAHCKNLVILPE-NICSLRF 619

Query: 790 LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDL 829
           L+ L V  C++L  L E L  LQ L+   L  L+   P L
Sbjct: 620 LKFLNVNACSKLHRLMESLESLQCLEELYLGWLNCELPTL 659


>gi|357515077|ref|XP_003627827.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
 gi|355521849|gb|AET02303.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
          Length = 1266

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 322/944 (34%), Positives = 452/944 (47%), Gaps = 195/944 (20%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
           KTT+A AIFD FS +FEG CF+ ++ G+     GL  L  ++L+  L EK  V    +  
Sbjct: 225 KTTIAAAIFDLFSSQFEGCCFLENI-GDESERHGLNFLHNKLLTMLLEEKENVHVGTVRI 283

Query: 79  --HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
             +++K R+   K+LIVLDDV  + QL  L+G     G GSR++VT RDK  L + R  E
Sbjct: 284 GFNYSKSRLSHKKVLIVLDDVRTIEQLDFLVGAHTCLGPGSRVIVTARDKHALIE-RAHE 342

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH--SRSVVSYTKGNPLVLEVLGSSLC 194
             IY V  L F E+ + F   AFK+  CP D+ +   S SVV+Y  G PL L+VLGS   
Sbjct: 343 --IYEVKPLNFHESLQLFSLSAFKKV-CP-DIGYQQLSESVVNYAGGIPLALKVLGSLFS 398

Query: 195 LKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVA 254
            K K  W   +  L +I      +I +IL++S++ L    K IFLDIACF  G+D+  V 
Sbjct: 399 YKSKEIWQSTMTKLKKI---PCREIQNILRLSYDGLDDTEKEIFLDIACFLNGKDRQHVT 455

Query: 255 SILDDS---ESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQESEKEPGKRSRLW 310
            +LD         L+ L++K+L++ S N  + MH ++QEMGR+IVRQES K+PG+RSRL+
Sbjct: 456 RLLDACGFYAVPGLETLLEKALITFSNNNQVQMHALIQEMGREIVRQESTKDPGRRSRLY 515

Query: 311 DPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
           D +E+  VLK+N GT AIEGI LD+S+IK +NL    F  M NLR  KFY          
Sbjct: 516 DHEEVYDVLKNNMGTSAIEGISLDVSQIKDMNLSSDIFVKMINLRFLKFY---------- 565

Query: 371 PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
            S S E       V LP GL     KLRYLHW  YPL++LPS+F P+ LVEL +  S+V+
Sbjct: 566 -SRSGER----CSVSLPAGLKSFSNKLRYLHWSAYPLKSLPSSFSPEKLVELYMPNSRVK 620

Query: 431 QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP-----SNLHFVCPVTINFSYCVNLI 485
           + WEG        +Q+   L  +    C++L   P     SNL      T+N S CV L 
Sbjct: 621 RLWEG--------VQDLTNLKKMDLSCCENLIELPDFSMASNLQ-----TVNLSRCVRL- 666

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
                                V +SI  L  L  L+L  CK LK +  S   L SL  L 
Sbjct: 667 -------------------RHVHASILSLQKLVNLNLVWCKNLKSL-LSNTPLNSLRILE 706

Query: 546 LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
           L GC +L+ F    E+M +L       T I ELP S + L  L  L +  C +L NL   
Sbjct: 707 LYGCSSLKEFSVTSEEMTYLDL---RCTAINELPPSVKYLGRLMNLELSSCVRLRNL--- 760

Query: 606 IGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL-GLSAMGLLH 664
                               P+  +    L  L  S C  L++     L  GL ++G L 
Sbjct: 761 --------------------PNEFSCLKSLGRLVLSDCTLLDTSNLHLLFDGLRSLGYLC 800

Query: 665 ISDYA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL 723
           + +   + E+P  I+ LSSL  L LSG+N +++P  IK +SQ                  
Sbjct: 801 LDNCCNLTELPHNISLLSSLYYLSLSGSNVKNIPKSIKHLSQ------------------ 842

Query: 724 PLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSL 783
                                   LESLDL  C          + +QYL           
Sbjct: 843 ------------------------LESLDLCKC----------MSIQYL----------- 857

Query: 784 PELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICF 843
           PELP  +++L V NC  L++   +  C      ++ E L +H               +  
Sbjct: 858 PELPPSIEVLDVTNCTSLET---VFTC-----PAIDELLQEHK--------------VFI 895

Query: 844 EFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKL----SELRGSL----- 894
            F NC++LN  + N I+ D+ +R++  A   +    E + ++      SE   S      
Sbjct: 896 SFKNCVELNEYSRNGIMLDAQVRLKEAAYVDVSAKIEGSESDPCFFFKSEATSSYHHPPT 955

Query: 895 IVLPGSEIPDWFSNQSSGSSICIQLP-PHSSCRNLIGFAFCAVL 937
           ++ PGS +PDWF  +S+ +SI I+L   HS   N+ GF FC +L
Sbjct: 956 VICPGSRVPDWFHYRSTEASITIELSVSHSPQSNIFGFIFCLIL 999


>gi|359493293|ref|XP_002273413.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1640

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 336/1100 (30%), Positives = 510/1100 (46%), Gaps = 199/1100 (18%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
            KTTLAK +++   H+F+G+ F+ ++             Q  +L        ++ G +IP 
Sbjct: 222  KTTLAKVVYNTIVHQFDGASFLLNI----------SSQQLSLLQLQKQLLRDILGEDIPT 271

Query: 80   FTKE-----RVRRM----KLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLE 130
             +        +RRM    K+L+V DDVN   QL+ LI     FG GSRI+VT+ +K +L 
Sbjct: 272  ISDNSEGSYEIRRMFMSKKVLVVFDDVNTYFQLESLIQNRSTFGPGSRIIVTSGNKNLLA 331

Query: 131  KFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLG 190
               G+    Y    L  +EA + F   AF  N   +     SR +V Y KG P+ LEVLG
Sbjct: 332  GLGGD--AFYEAKELNCKEATQLFSLHAFHMNSPQKGFIGLSRCIVDYCKGLPIALEVLG 389

Query: 191  SSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDK 250
            S L  K+K  W  VL  L +    +I ++   L   F  L   +K +FLD+ACFF+GED 
Sbjct: 390  SLLFGKKKFEWKSVLQRLEKRPNMQIQNV---LMRCFQTLDDSMKDVFLDVACFFKGEDL 446

Query: 251  DFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLW 310
            DFV  IL+        +L D+SL+SI    L MHD++Q+   +IVRQ+   EPGK SRLW
Sbjct: 447  DFVERILEYGRLGT-RVLNDRSLISIFDKKLLMHDLMQKACWEIVRQQDHNEPGKWSRLW 505

Query: 311  DPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
            DP+++  VL  N GT+ IEGIFL++S    ++L   AF  M+ LRL + Y          
Sbjct: 506  DPEDVHHVLTKNTGTERIEGIFLNMSLSNEMHLTSDAFKKMTRLRLLRVY---------- 555

Query: 371  PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
               +    +  + V LP    +   +LRYLHWD + L +LPSNF  + L EL+LR S ++
Sbjct: 556  -QNAENNSIVSNTVHLPRDFKFPSHELRYLHWDGWTLESLPSNFDGEKLGELSLRHSSLK 614

Query: 431  QPWEGEK----------------------------------AC-----VPSSIQNFKYLS 451
              W+  K                                   C     V  S+   K L+
Sbjct: 615  YLWKRRKRLPKLVVIDLGNSQHLLECPNLSFAPRVERLILDGCTSLPEVHPSVTKLKRLT 674

Query: 452  ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG---KVTRLYLGQSAIEEVP 508
             L+ K C+ L  FPS         +N S C  + +FP+I G    +  L L  +AI E+P
Sbjct: 675  ILNVKNCKMLHYFPSITGLESLEVLNLSGCSKIDKFPEIQGCMENLLELNLEGTAIVELP 734

Query: 509  SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI 568
             S+  L  L +LD++ CK L  + ++   L+SL TL+L GC  LE FPEI+E ME L+ +
Sbjct: 735  PSVVFLPRLVLLDMKNCKNLMILPSNIYSLKSLGTLVLSGCSGLEIFPEIMEDMECLQEL 794

Query: 569  YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL-YYILAAASAISQLPS 627
              D T I EL  S  +L GL++L +  C  L +LP++I SL  L   I++  S +S+LP 
Sbjct: 795  LLDGTSIKELSPSIVHLKGLQLLNMRKCKNLRSLPNSICSLRSLETLIVSGCSKLSKLPE 854

Query: 628  SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
             +                       FL+ L A G       A+ + P  + +L +L+ L 
Sbjct: 855  DLGRLQ-------------------FLMKLQADGT------AITQPPLSLFHLRNLKELS 889

Query: 688  LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP-- 745
                   +  + I  +   R +H E+                    D   LQ LP L   
Sbjct: 890  FRRCKGSTSNSWISSL-LFRLLHRENS-------------------DGTGLQ-LPYLSGL 928

Query: 746  FCLESLDLTGCNML-RSLPELPLCLQYL---NLEDCNMLRSLPELPLC--LQLLTVRNCN 799
            + L+ LDL+GCN+  RS+ +    L++L   NL   N++    E+     L++++V  C 
Sbjct: 929  YSLKYLDLSGCNLTDRSINDNLGHLRFLEELNLSRNNLVTVPEEVNRLSHLRVISVNQCK 988

Query: 800  RLQSLPEILLCLQELDAS---VLEKLSKHSPDLQWAPESLKSAA----ICFEFTNCLKLN 852
             LQ + ++   ++ LDA     LE LS  SP    +P+ L S++    + F+  NC  L 
Sbjct: 989  SLQEISKLPPSIKLLDAGDCISLESLSVLSPQ---SPQFLSSSSCLRLVTFKLPNCFAL- 1044

Query: 853  GKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSG 912
              A + +   ++L   H                 L E+  S IVLPGS IP+WF + S G
Sbjct: 1045 --AQDNVA--TILEKLHQNF--------------LPEIEYS-IVLPGSTIPEWFQHPSIG 1085

Query: 913  SSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLG 972
            SS+ I+LPP+   ++ +GFA C+V                S + D  I+  +ET+ + L 
Sbjct: 1086 SSVTIELPPNWHNKDFLGFALCSVF---------------SLEEDEIIQGPAETEWLRL- 1129

Query: 973  YNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIA---TFKFFAERKFYKIKRCGLCPV 1029
                        D + L ++P   +  P       +   T  F      + +K CG+  +
Sbjct: 1130 -----------IDHIWLVYQPGAKLMIPKSSSPNKSRKITAYFSLSGASHVVKNCGIHLI 1178

Query: 1030 YA------NPSETKDNTFTI 1043
            YA      + +  K++ FT+
Sbjct: 1179 YARDKKVNHQTRRKESRFTV 1198


>gi|227438239|gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 285/882 (32%), Positives = 420/882 (47%), Gaps = 168/882 (19%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V+ VGIWGMGG+GKTT+AK ++++ S  F+  CF+ +V+      G +E LQ + L    
Sbjct: 220  VRTVGIWGMGGVGKTTIAKYLYNKLSSRFQAHCFMENVKEVCNRYG-VERLQGEFLCRMF 278

Query: 67   SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
             E+  V+  ++    KER RR ++LIVLDDV+   QL  L+ E   FG GSRI+VTTRD+
Sbjct: 279  RERDSVSCSSM---IKERFRRKRVLIVLDDVDRSEQLDGLVKETGWFGPGSRIIVTTRDR 335

Query: 127  RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVL 186
             +L     E   IY+V  L  +EA   FCN+AF+      +    +   V+Y  G PL L
Sbjct: 336  HLLVSHGIE--LIYKVKCLPEKEALHLFCNYAFRNETIAPEFRVLAVQAVNYAFGLPLAL 393

Query: 187  EVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFE 246
             VLGS L  + +  W   L    R+  S   DI ++L++S++ L  + K+IFL I+CF+ 
Sbjct: 394  RVLGSFLYRRGEREWESTL---ARLETSPHSDIMEVLRVSYDGLDEQEKAIFLYISCFYN 450

Query: 247  GEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEP 303
             +  D+   +LD     +++ + +L +KSL+ IS   + MHD++++MGR++VR+++E   
Sbjct: 451  MKHVDYATRLLDICGYAAEIGITVLTEKSLIVISNGCIKMHDLVEQMGRELVRRQAE--- 507

Query: 304  GKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPK 363
              R  LW P++I  +L    GT  +EG+ L++S++  +    + F  +SNL+L  FY   
Sbjct: 508  --RFLLWRPEDICDLLSETTGTSVVEGMSLNMSEVSEVLASDQGFEGLSNLKLLNFY--- 562

Query: 364  FYEIEKLPSMSTEEQLSY---SKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                           LSY   ++V LPNGL YLP+KLRYL WD YPL +LPS F P+ LV
Sbjct: 563  --------------DLSYDGETRVHLPNGLTYLPRKLRYLRWDGYPLNSLPSRFHPEFLV 608

Query: 421  ELNLRCSKVEQPWEG------------------------EKAC---------------VP 441
            EL +  S +   W G                         KA                V 
Sbjct: 609  ELFMSNSHLHYLWNGIQPLRKLKKMDLSRCKYLIEIPDLSKATNLEELNLSYCQSLTEVT 668

Query: 442  SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ 501
             SI+N + L       C  L+  PS +      T+  + C +L+ FP+ S    RLYL  
Sbjct: 669  PSIKNLQKLYCFYLTNCTKLKKIPSGIALKSLETVGMNGCSSLMHFPEFSWNARRLYLSS 728

Query: 502  SAIEEVPSS----IECLTDLEVLD---------------------LRGCKRLKRISTSFC 536
            + IEE+PSS    + CL +L++ D                     L GCK L+ +  S  
Sbjct: 729  TKIEELPSSMISRLSCLVELDMSDCQSIRTLPSSVKHLVSLKSLSLNGCKHLENLPDSLL 788

Query: 537  KLRSLVTLILLGCLNLEHFPEILEKMEHLK-----------RI----------YSDRTPI 575
             L  L TL + GCLN+  FP + + +E L+           RI           S    +
Sbjct: 789  SLTCLETLEVSGCLNINEFPRLAKNIEVLRISETSINEVPARICDLSQLRSLDISGNEKL 848

Query: 576  TELPSSFENLPGLEVLFVEDCSKLDN------------------------LPDNIGSLEY 611
              LP S   L  LE L +  C  L++                        LP+NIG+L  
Sbjct: 849  KSLPVSISELRSLEKLKLSGCCVLESLPPEICQTMSCLRWLDLERTSIKELPENIGNLIA 908

Query: 612  LYYILAAASAISQLPSSVALSNMLRSLD-----------SSHCKGLESFPRTFLLGLSAM 660
            L  + A  +AI + P S+A    L+ L             S C  L  F     L LS M
Sbjct: 909  LEVLQAGRTAIRRAPLSIARLERLQVLAIGNSFYTSQGLHSLCPHLSIFNDLRALCLSNM 968

Query: 661  GLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSL 720
             ++        EIP  I  L SL  L LSGNNFE +PA I+++++L  + + +   LQ+L
Sbjct: 969  NMI--------EIPNSIGNLWSLSELDLSGNNFEHIPASIRRLTRLSRLDVNNCQRLQAL 1020

Query: 721  P-ELPLCLKYLHLIDCKMLQSLP--VLPFCLESLDLTGCNML 759
            P +LP  L Y++   C  L S+     P CL  L  + C  L
Sbjct: 1021 PDDLPRRLLYIYAHGCTSLVSISGCFKPCCLRKLVASNCYKL 1062


>gi|224131106|ref|XP_002328455.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838170|gb|EEE76535.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1150

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 304/838 (36%), Positives = 441/838 (52%), Gaps = 69/838 (8%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S  V IVGIWGMGGIGK+T A+A++ +   +FEG CF  +VR  S+  G ++H+++++L
Sbjct: 113 GSTGVLIVGIWGMGGIGKSTTAEAVYHRNCSKFEGHCFFQNVREESQKHG-IDHVRQEIL 171

Query: 63  STTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
              L +K + +    +P   K  ++R K+LIVLDDVN+   LK L+GE   FGQGSRI+V
Sbjct: 172 GEVLEKKDMTIRTKVLPPAIKRMLQRKKVLIVLDDVNDPQVLKYLLGEDGLFGQGSRIMV 231

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           T+RD++VL     +E KIY V  LE ++A   F   AFK+N+  E     S++VVS  KG
Sbjct: 232 TSRDRQVLIN-ECDEDKIYEVEILEEDDALRLFSLHAFKQNNPIEGYIGLSKTVVSCVKG 290

Query: 182 NPLVLEVLGSSLCLKRK-SHW-GKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            PLVLEVLG+SL  K    +W  KV       CE    ++   L++ +++L    K IFL
Sbjct: 291 VPLVLEVLGASLYRKTSVEYWESKVAQLRTNGCE----EVKKCLEMCYHELRDTEKKIFL 346

Query: 240 DIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
           DIACFF    +D +   LD  E   +D LID  L+ I  N + MHD+L ++G++IV QE+
Sbjct: 347 DIACFFGRCKRDHLQQTLDLEERSGIDRLIDMCLIKIVQNKIWMHDVLVKLGKKIVHQEN 406

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSNLRLFK 358
             +P +RSRLW   +I RVL   +    +E I L+L  I + + L P AF  M NLRL K
Sbjct: 407 -VDPRERSRLWQADDIYRVLTTQRTGSKVESISLNLLAITEEMILSPTAFEGMYNLRLLK 465

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSK---VQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
            Y P F    K PS   +EQ+   K   + LP GL +L  +LR+L+W  YPL+++PSNF 
Sbjct: 466 IYYPPFL---KDPS---KEQIMNGKRVGIHLPGGLHFLSSELRFLYWYNYPLKSMPSNFF 519

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGC---QSLRSFP--SNLHF 470
           PK   +L + CS++EQ W   +      ++  K ++  S K       L   P    LH 
Sbjct: 520 PKKPFQLEMPCSQLEQFWNEYQP-----LEILKLMNPPSSKPSLIDSDLFKVPHLEVLHP 574

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
             P +I +S  +  +E P++    T           +PSSI CL+ L  L+L  C+ L  
Sbjct: 575 GIPSSIKYSTRLTTLELPRLESFYT-----------LPSSIGCLSQLVRLNLSSCESLAS 623

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
           +  +  +L+SLV L L  C  L   P  + K++ L ++      +  LP S   L  LE 
Sbjct: 624 LPDNIDELKSLVELDLYSCSKLASLPNSICKLKCLTKLN-----LASLPDSIGELRSLEE 678

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
           L +  CSKL +LP++IG L+ L ++ L   S ++ LP ++     L+  D + C GL SF
Sbjct: 679 LDLSSCSKLASLPNSIGELKSLQWLDLNGCSGLASLPDNIGELKSLQWFDLNGCFGLASF 738

Query: 650 PRTFLLGLSAM-----GLLHISDYAVREIPQE--IAYLSSLEILYLSGN-NFESLPAIIK 701
                 GL+++      L  +    +R   Q+  I  L SL+ L  SG     SLP  I 
Sbjct: 739 DLNGCSGLASLPSSIGALKSLKSLFLRVASQQDSIDELESLKSLIPSGCLGLTSLPDSIG 798

Query: 702 QMSQLRFIHLEDFNMLQSLPE---LPLCLKYLHLIDCKMLQSLPVLPF---CLESLDLTG 755
            +  L  ++    + L SLP+       LK L L  C  L SL         LE L+L G
Sbjct: 799 ALKSLENLYFSGCSGLASLPDNIGSLKSLKSLTLHGCSGLASLQDRIGELKSLEKLELNG 858

Query: 756 CNMLRSLPE---LPLCLQYLNLEDCNMLRSLP----ELPLCLQLLTVRNCNRLQSLPE 806
           C  L SLP+       L++L L+ C+ L SLP    EL   L+ L +  C+ L SL +
Sbjct: 859 CLGLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELK-SLKQLYLNGCSELASLTD 915



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 172/386 (44%), Gaps = 41/386 (10%)

Query: 438  ACVPSSIQNFKYLSALSFKGCQSLRSFPS--NLHFVCPVTINFSYCVNLIEFPQISGKVT 495
            A +PSSI   K L +L  +      S     +L  + P     S C+ L   P   G + 
Sbjct: 747  ASLPSSIGALKSLKSLFLRVASQQDSIDELESLKSLIP-----SGCLGLTSLPDSIGALK 801

Query: 496  RL----YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
             L    + G S +  +P +I  L  L+ L L GC  L  +     +L+SL  L L GCL 
Sbjct: 802  SLENLYFSGCSGLASLPDNIGSLKSLKSLTLHGCSGLASLQDRIGELKSLEKLELNGCLG 861

Query: 552  LEHFPEILEKMEHLKRIYSDR-TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
            L   P+ +  ++ LK +  D  + +  LP     L  L+ L++  CS+L +L DNIG L+
Sbjct: 862  LASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTDNIGELK 921

Query: 611  YLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISD 667
             L  + L   S ++ LP  +     L  L+ + C GL S P T   L  L  +     S 
Sbjct: 922  SLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALKCLKKLDFFGCSG 981

Query: 668  YA-VREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
             A +  +P  I  L SL+ L L G +   SLP  I ++  L+ ++L   + L SL +   
Sbjct: 982  LAKLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTD--- 1038

Query: 726  CLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE---LPLCLQYLNLEDCNMLRS 782
                    +   L+SL       + L L GC+ L SLP+       L+ L L  C+ L S
Sbjct: 1039 --------NIGELKSL-------KQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLAS 1083

Query: 783  LPELP---LCLQLLTVRNCNRLQSLP 805
            LP+      CL+ L    C+ L SLP
Sbjct: 1084 LPDTIDALKCLKKLDFFGCSGLASLP 1109



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 149/331 (45%), Gaps = 18/331 (5%)

Query: 440  VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV-TINFSYCVNLIEFPQISGKVTRLY 498
            +P SI   K L  L F GC  L S P N+  +  + ++    C  L       G++  L 
Sbjct: 793  LPDSIGALKSLENLYFSGCSGLASLPDNIGSLKSLKSLTLHGCSGLASLQDRIGELKSLE 852

Query: 499  L----GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
                 G   +  +P +I  L  L+ L L GC  L  +     +L+SL  L L GC  L  
Sbjct: 853  KLELNGCLGLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELAS 912

Query: 555  FPEILEKMEHLKRIYSDR-TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL- 612
              + + +++ LK++Y +  + +  LP     L  LE+L +  CS L +LPD I +L+ L 
Sbjct: 913  LTDNIGELKSLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALKCLK 972

Query: 613  ---YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISD 667
               ++  +  + ++ LP ++     L+ L    C GL S P     L  L  + L   S+
Sbjct: 973  KLDFFGCSGLAKLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSE 1032

Query: 668  YAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP-- 724
             A   +   I  L SL+ LYL+G +   SLP  I ++  L  + L   + L SLP+    
Sbjct: 1033 LA--SLTDNIGELKSLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDA 1090

Query: 725  -LCLKYLHLIDCKMLQSLPVLPFCLESLDLT 754
              CLK L    C  L SLP     LESL  +
Sbjct: 1091 LKCLKKLDFFGCSGLASLPNNIGELESLQFS 1121



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 114/290 (39%), Gaps = 60/290 (20%)

Query: 384  VQLPNGLDYLPKKLRYLHWDT-YPLRTLPSNFKP-KNLVELNLR-CSKVEQPWEGEKACV 440
              LP+ +  L K L++L  D    L +LP      K+L +L L  CS        E A +
Sbjct: 863  ASLPDNIGTL-KSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCS--------ELASL 913

Query: 441  PSSIQNFKYLSALSFKGCQSLRSFPSNLHFV----------------CPVTINFSYCVNL 484
              +I   K L  L   GC  L S P  +  +                 P TI+   C+  
Sbjct: 914  TDNIGELKSLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALKCLKK 973

Query: 485  IEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
            ++F   SG         + +  +P +I  L  L+ L L GC  L  +     +L+SL  L
Sbjct: 974  LDFFGCSG--------LAKLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQL 1025

Query: 545  ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
             L GC  L    + + +++ LK++Y                       +  CS L +LPD
Sbjct: 1026 YLNGCSELASLTDNIGELKSLKQLY-----------------------LNGCSGLASLPD 1062

Query: 605  NIGSLEYLYYILA-AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF 653
             IG L+ L  +     S ++ LP ++     L+ LD   C GL S P   
Sbjct: 1063 RIGELKSLELLELNGCSGLASLPDTIDALKCLKKLDFFGCSGLASLPNNI 1112


>gi|224127750|ref|XP_002329168.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870949|gb|EEF08080.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1018

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 332/1007 (32%), Positives = 475/1007 (47%), Gaps = 183/1007 (18%)

Query: 46   GNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKR 105
            G+S    G+E   K+  S    E  E     +  FTK+ +RR K+LIVLDDV+   QL+ 
Sbjct: 164  GHSMNLVGIEEHIKRTESLLCMESQEPPSLAVA-FTKDCLRRKKVLIVLDDVDNSRQLQE 222

Query: 106  L-IGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHC 164
            L +G  D FG GS+I+VT+RDK+VL   +     IY+V GL   +A       AFK+N C
Sbjct: 223  LSLGVHDLFGPGSKILVTSRDKQVL--IKNGVDAIYKVQGLNNHDALRLLSLNAFKKN-C 279

Query: 165  PE-DLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDIL 223
            P+ D       +V Y KGNPL L VLGSSL  + K  W   L+ L ++   EI  +   L
Sbjct: 280  PKRDHIELLERMVDYAKGNPLALIVLGSSLYDRSKEKWYSALNKLGKVPNPEIQRV---L 336

Query: 224  KISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF 280
            +IS++ L    + IFLDIA FF G + +    +LD   S +   L ILIDKSL++IS N 
Sbjct: 337  RISYDGLDGEQQQIFLDIAFFFNGAEWNHAVKVLDSCYSSLQFDLSILIDKSLITISQNT 396

Query: 281  LNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG 340
            L MHDILQEM   IVR+ES K PGKRSRL D ++I  VLK  KGT+A+EGI LD+SK+  
Sbjct: 397  LEMHDILQEMAYSIVREES-KNPGKRSRLCDHEDIYHVLKKKKGTEAVEGICLDISKMPE 455

Query: 341  INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLP-NGLDYLPKKLRY 399
            ++L+   F  M++LR  KFY P FY ++           S  KV LP +GL YL  +L+Y
Sbjct: 456  MHLESDTFARMNSLRFLKFYHP-FYFMD-----------SKDKVHLPLSGLKYLSDELKY 503

Query: 400  LHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQ 459
            LHW  +P ++LP NF  +N+V+L L  S+VEQ W G +      + N ++          
Sbjct: 504  LHWHRFPAKSLPQNFCAENIVDLTLHSSRVEQLWTGVQ-----DLLNLRW---------- 548

Query: 460  SLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEV 519
                            I+ S    L+E P +S                        +LE 
Sbjct: 549  ----------------IDLSRSTYLLEIPDLSRA---------------------KNLEY 571

Query: 520  LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP 579
            +DL  C+ L  + +S   L  L  LIL GC NL   P+ +E                   
Sbjct: 572  IDLSFCESLLEVHSSIQHLEKLEILILSGCKNLGIVPKRIE------------------- 612

Query: 580  SSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
            S F     L +L +  C K+   P+  G LE L   +   +AI +LP S++    +R LD
Sbjct: 613  SKF-----LRILDLSHCKKVRKCPEISGYLEEL---MLQGTAIEELPQSISKVKEIRILD 664

Query: 640  SSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS-GNNFESLPA 698
             S C  +  FP+        +  L +    + E+P  I +L++L +L ++      SLP 
Sbjct: 665  LSGCSNITKFPQI----PGNIKQLRLLWTVIEEVPSSIEFLATLGVLEMNFCEQLSSLPT 720

Query: 699  IIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCK--MLQSLPV-LPF--CLESLDL 753
             I ++  L  + L     L+S PE+   ++ L  +D     ++ LP  + F  CL  L L
Sbjct: 721  CICKLKCLERLELSYCPKLESFPEILEPMESLKCLDLSGTAIKELPSSIKFLSCLYMLQL 780

Query: 754  TGCNMLRSLP----ELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILL 809
              C+ L SLP    +LP+ L+YL L  C  L SLPELP  ++ L    C  L++L     
Sbjct: 781  NRCDNLVSLPSFIEKLPV-LKYLKLNYCKSLLSLPELPPSVEFLEAVGCESLETL----- 834

Query: 810  CLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRH 869
                        + K S    W             F NC KL+ K    +LAD+      
Sbjct: 835  -----------SIGKESN--FWY----------LNFANCFKLDQKP---LLADT-----Q 863

Query: 870  MAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLI 929
            M I S ++  E+ I            +LPGSEIP WF +QS GSS+ I+LP +    N  
Sbjct: 864  MKIQSGKMRREVTI------------ILPGSEIPGWFCDQSMGSSVAIKLPTNCHQHNGF 911

Query: 930  GFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYN---SRYIEDLIDSDR 986
             F    V      +  C R F        E       +H D+ +N     Y    ++SD+
Sbjct: 912  AFGMVFVFPDPPTELQCNRIFICECHARGE-----NDEHHDVIFNLSTCAYELRSVESDQ 966

Query: 987  VILGFKPCLNVGFP--DGYHHTIATFKFFAE-----RKFYKIKRCGL 1026
            ++L + PC  V       Y     +F+F+ +     +   K+KRCG+
Sbjct: 967  MLLLYNPCEFVKRDCISQYSGKEISFEFYLDEPSGLQNRCKVKRCGV 1013


>gi|37781356|gb|AAP44393.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 304/954 (31%), Positives = 462/954 (48%), Gaps = 152/954 (15%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
             S  V  +GI GM G+GKTTLA+ I+D    +F+G+CF+ +VR  S   G LE LQ+ +L
Sbjct: 212  GSGGVHFLGILGMSGVGKTTLARVIYDNIRSQFQGACFLHEVRDRSAKQG-LERLQEILL 270

Query: 63   STTLS-EKLEV----AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            S  L  +KL +     G N+    K+R++  K+L+VLDDV+ + QL  L GE + FG GS
Sbjct: 271  SEILVVKKLRINDSFEGANM---QKQRLQYKKVLLVLDDVDHIDQLNALAGEREWFGDGS 327

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI++TT+DK +L K+  E +KIYR+  L   E+ + F   AFK+N   ++    S  V+ 
Sbjct: 328  RIIITTKDKHLLVKY--ETEKIYRMKTLNNYESLQLFKQHAFKKNRPTKEFEDLSAQVIK 385

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
            +T G PL L+VLGS L  +    W   +  L +I E+EI      L+ SF  L    + I
Sbjct: 386  HTDGLPLALKVLGSFLYGRGLDEWISEVERLKQIPENEI---LKKLEQSFTGLHNTEQKI 442

Query: 238  FLDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
            FLDIACFF G+ KD V  IL+         + +L++K L++     + +H ++Q+MG  I
Sbjct: 443  FLDIACFFSGKKKDSVTRILESFHFCPVIGIKVLMEKCLITTLQGRITIHQLIQDMGWHI 502

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            VR+E+  +P   SRLW  ++I  VL+ N GTD IEG+ L L+  + +N   +AF  M+ L
Sbjct: 503  VRREATDDPRMCSRLWKREDICPVLERNLGTDKIEGMSLHLTNEEEVNFGGKAFMQMTRL 562

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            R  KF                  Q +Y    +  G ++LP +LR+L W  YP ++LP++F
Sbjct: 563  RFLKF------------------QNAY----VCQGPEFLPDELRWLDWHGYPSKSLPNSF 600

Query: 415  KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
            K   LV L L+ S++ Q W+  K      +   KY+                        
Sbjct: 601  KGDQLVSLKLKKSRIIQLWKTSK-----DLGKLKYM------------------------ 631

Query: 475  TINFSYCVNLIEFP--QISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
              N S+   LI  P   ++  + RL L + +++ E+  SIE L  L +L+L+ C+ LK +
Sbjct: 632  --NLSHSQKLIRMPDFSVTPNLERLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTL 689

Query: 532  STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
                 +L  L  L+L GC  L  FPEI EKM  L  +Y D T ++ELP+S ENL G+ V+
Sbjct: 690  PKRI-RLEKLEILVLTGCSKLRTFPEIEEKMNCLAELYLDATSLSELPASVENLSGVGVI 748

Query: 592  FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
             +  C  L++LP +I  L+                        L++LD S C  L++ P 
Sbjct: 749  NLSYCKHLESLPSSIFRLK-----------------------CLKTLDVSGCSKLKNLPD 785

Query: 652  TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF-IH 710
               L L  +  LH +  A++ IP  ++ L +L+ L LSG N  S         Q    ++
Sbjct: 786  DLGL-LVGLEQLHCTHTAIQTIPSSMSLLKNLKRLSLSGCNALSSQVSSSSHGQKSMGVN 844

Query: 711  LEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQ 770
             ++ + L SL  + L L   ++ D  +L +L  LP  LE L L G N   ++P   +   
Sbjct: 845  FQNLSGLCSL--IMLDLSDCNISDGGILSNLGFLP-SLERLILDG-NNFSNIPAASISRL 900

Query: 771  YLNLE----DCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHS 826
                      C  L SLPELP  ++ +    C  L S+ ++       DAS         
Sbjct: 901  TRLKTLKLLGCGRLESLPELPPSIKGIYANECTSLMSIDQLTKYPMLSDAS--------- 951

Query: 827  PDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAI-ASLRLGYEMAINE 885
                              F NC +L     +  + DSLL+    A+  ++R G+      
Sbjct: 952  ------------------FRNCRQLVKNKQHTSMVDSLLKQMLEALYMNVRFGF------ 987

Query: 886  KLSELRGSLIVLPGSEIPDWFSNQSSGS-SICIQLPPHSSCRNLIGFAFCAVLD 938
                       +PG EIP+WF+ +S G+ S+ + LP +       GF  C V D
Sbjct: 988  ----------YVPGMEIPEWFTYKSWGTQSMSVALPTNWLTPTFRGFTVCVVFD 1031


>gi|224116202|ref|XP_002331986.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832110|gb|EEE70587.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1098

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 268/764 (35%), Positives = 399/764 (52%), Gaps = 90/764 (11%)

Query: 10  VGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK 69
           +GI GMGG+GKTT+A+ ++D+   +FEGSCF+++VR       G   LQ+Q+LS  L E+
Sbjct: 60  IGICGMGGLGKTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEILMER 119

Query: 70  LEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRV 128
             V   +      K R +R K+L+VLDDV++  QL+ L  E   FG GSRI++T+RDK+V
Sbjct: 120 ASVCDSSRGIEMIKRRSQRKKILVVLDDVDDHKQLESLAAESKWFGPGSRIIITSRDKQV 179

Query: 129 LEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEV 188
           L   R    +IY    L  ++A   F   AF+ +   ED    S+ VV Y  G PL LEV
Sbjct: 180 LT--RNGVARIYEAEKLNDDDALMLFSQKAFENDQPAEDFLDLSKQVVGYANGLPLALEV 237

Query: 189 LGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGE 248
           +GS L  +    W   ++ +N I +   H+I  +L +SF+ L    K IFLDIACF +G 
Sbjct: 238 IGSFLHGRSIPEWRGAINRMNEIPD---HEIIKVLLVSFDGLHELEKKIFLDIACFLKGF 294

Query: 249 DKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGK 305
             D +  ILD      S  + +LI++SL+S+S + + MH++LQ+MG++I+R+ES +EPG+
Sbjct: 295 KIDRITRILDGRGFHASIGIPVLIERSLISVSRDQVWMHNLLQKMGKEIIRRESPEEPGR 354

Query: 306 RSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFY 365
           RSRLW  K++   L  N G + IE IFLD+  IK    +  AF+ MS LRL K       
Sbjct: 355 RSRLWTYKDVCLALMDNIGKEKIEAIFLDMPGIKEAQWNMEAFSKMSRLRLLKI------ 408

Query: 366 EIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLR 425
                           + VQL  G + L  KLR+L W +YP ++LP++ +   LVEL++ 
Sbjct: 409 ----------------NNVQLSEGPEDLSNKLRFLEWHSYPSKSLPASLQVDELVELHMA 452

Query: 426 CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLI 485
            S +EQ W G K             SA++ K                   IN S  +NL 
Sbjct: 453 NSSIEQLWYGCK-------------SAINLK------------------IINLSNSLNLS 481

Query: 486 EFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLV 542
           + P ++G   +  L L G +++ EV  S+     L+ ++L  CK + RI  +  ++ SL 
Sbjct: 482 KTPNLTGIPNLESLILEGCTSLSEVHPSLALHKKLQHVNLVNCKSI-RILPNNLEMESLK 540

Query: 543 TLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNL 602
              L GC  LE FP+I+  M  L  +  D T IT+LPSS  +L GL +L +  C  L+++
Sbjct: 541 VCTLDGCSKLEKFPDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESI 600

Query: 603 P------------------------DNIGSLEYLYYILAAASAISQLPSSVALSNMLRSL 638
           P                        +N+G +E L     + + I QLP+S+ L   L  L
Sbjct: 601 PSSIGCLKSLKKLDLSGCSELKCIPENLGKVESLEEFDVSGTLIRQLPASIFLLKNLEVL 660

Query: 639 DSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPA 698
               CK +   P    L    +  L   +     +P++I +LSSL  L LS N F SLP 
Sbjct: 661 SMDGCKRIVMLPSLSSLCSLEVLGLRACNLREGALPEDIGHLSSLRSLDLSQNKFVSLPK 720

Query: 699 IIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
            I Q+S+L  + LED  ML SLPE+P  ++ ++L  C+ L+ +P
Sbjct: 721 AINQLSELEMLVLEDCTMLASLPEVPSKVQTVNLNGCRSLKKIP 764


>gi|227438287|gb|ACP30633.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1207

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 344/1103 (31%), Positives = 524/1103 (47%), Gaps = 178/1103 (16%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNIP 78
            KTTLA  ++++    F+G CF++++R NS  +G +E LQK++ ST L ++ L+   P   
Sbjct: 216  KTTLADCLYERMRGMFDGCCFLANIRENSGRSG-IESLQKELFSTLLDDRYLKTGAPASA 274

Query: 79   HFT-KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
            H     R++  +LLIVLDDVN+  Q+K L+G    +  GSRI++TTRD +++   +G++ 
Sbjct: 275  HQRFHRRLKSKRLLIVLDDVNDEKQIKYLMGHCKWYQGGSRIIITTRDSKLI---KGQKY 331

Query: 138  KIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
             + ++N     EA + FC  AF    CP ++    +   + Y +G+PL L+VLGS L   
Sbjct: 332  VLPKLND---REALKLFCLNAFA-GSCPLKEFEGLTNMFLDYARGHPLALKVLGSDLRDM 387

Query: 197  RKSHWGKVLHDLNRICESEIH-DIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
             K  W   L     + +S+ H DIY++L+ S+ +L+   K IFLDIACFF  E  D+V S
Sbjct: 388  NKLFWEAKLD----LLKSKSHGDIYEVLETSYEELSNDQKDIFLDIACFFRSEKVDYVTS 443

Query: 256  ILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQI-----------VRQESEK 301
            +L     DV   +  L+DK L++ S N + MHD+LQ MG++I           VR  S+ 
Sbjct: 444  LLSSRGVDVSSLIQDLVDKCLITRSDNRIEMHDMLQTMGKEISFKPEPIGIRDVRWLSKH 503

Query: 302  EPGKRS--RLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
             P      RLWD ++I  +L    GT+ I GIFLD SK   + L P AF  M NL+  K 
Sbjct: 504  RPQHHWHLRLWDSEDICDMLTKGLGTEKIRGIFLDTSKRGKLRLRPDAFKGMYNLKYLKI 563

Query: 360  YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
            Y           S  +    +  K+    GLD+LP +L YLHW  +PL+  P +F PKNL
Sbjct: 564  Y----------DSRCSRGCEAVFKLHF-KGLDFLPDELAYLHWHGFPLQRFPLDFDPKNL 612

Query: 420  VELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
            V+L L  S++E+ W  +K               L +                    ++ S
Sbjct: 613  VDLKLPHSELEEIWGDDKVA-----------GMLKW--------------------VDLS 641

Query: 480  YCVNLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFC 536
            +  NL     ++    + RL L G ++++ +PSSI CL  L  L+LR C  LK +     
Sbjct: 642  HSSNLCRLLGLAKAHNLERLNLEGCTSLKMLPSSINCLEKLVYLNLRECTSLKSLPEE-T 700

Query: 537  KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
            K +SL TLIL GC +L+ FP I E +E L     D T I  LP S E    L  L +++C
Sbjct: 701  KSQSLQTLILSGCSSLKKFPLISESIEVL---LLDGTAIKSLPDSIETSSKLASLNLKNC 757

Query: 597  SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
             +L +L  N+  L+                        L+ L  S C  LE FP      
Sbjct: 758  KRLKHLSSNLYKLK-----------------------CLQELILSGCSQLEVFPE-IKED 793

Query: 657  LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM 716
            + ++ +L + D ++ E+P  + +LS+++   L G N E    ++     L    L D  +
Sbjct: 794  MESLEILLLDDTSITEMPN-MKHLSNIKTFSLCGTNCEVSVRVLFLSPPLGCSRLTDLYL 852

Query: 717  ----LQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYL 772
                L  +P +           C    S+  LP   ES      N L +L       ++ 
Sbjct: 853  SRCSLYRIPNISGNGLSSLQSLCLSGNSIENLP---ESF-----NQLHNL-------KWF 897

Query: 773  NLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWA 832
            +L+ C  L+SLP LP  LQ L    C  L++L   L  L     +V E++  HS      
Sbjct: 898  DLKYCKNLKSLPVLPQNLQYLDAHECESLETLANPLTPL-----TVRERI--HS------ 944

Query: 833  PESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRG 892
                      F F+NC KLN  A   ++  + ++ + MA AS++  Y   I E L     
Sbjct: 945  ---------MFMFSNCYKLNQDAQESLVGHARIKSQLMANASVKRYYRGFIPEPLVG--- 992

Query: 893  SLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYV 952
              +  P +EIP WF  Q  G S+ I LPPH    N +G AF  V+  K+ + DC + F V
Sbjct: 993  --VCFPATEIPSWFFYQRLGRSLDISLPPHWCDTNFVGLAFSVVVSFKEYE-DCAKRFSV 1049

Query: 953  SF--QFDLEIKTLSETKHVDLGYNS-----RYIEDLIDSDRVILGFKPCLNV----GFPD 1001
             F  +F+ +  + +       G+N      R+    + SD V +G+  C  V    G  +
Sbjct: 1050 KFSGKFEDQDGSFTRFNFTLAGWNEPCGTLRHEPRKLTSDHVFMGYNSCFQVKKLHGESN 1109

Query: 1002 GYHHTIATFKFFA---ERK----FYKIKRCGLCPVYANPSETKDNTF--TINFATEVWKL 1052
               +T A+FKF+A   E+K      ++ +CG+  VY  P + ++       N     WK 
Sbjct: 1110 SCCYTKASFKFYATDDEKKKKLEMCEVIKCGMSLVYV-PEDDEECMLLKKTNLVQLSWKT 1168

Query: 1053 DDLPSAS-GTLDVEEL-ELSPKR 1073
            +  PS S G+ DV  + +L PKR
Sbjct: 1169 E--PSCSNGSDDVNIMDDLRPKR 1189


>gi|147841230|emb|CAN68969.1| hypothetical protein VITISV_043153 [Vitis vinifera]
          Length = 1074

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 291/870 (33%), Positives = 441/870 (50%), Gaps = 126/870 (14%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V++VGI+G+GGIGKTT+AK +++    +F G+ F+  V+  S+       L +++L  
Sbjct: 20  DDVRMVGIYGIGGIGKTTIAKMVYNDILCQFNGASFLEGVKNRSQCNNDRLQLLQELLHG 79

Query: 65  TLSE---KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
            +     KLE     + +  K R+   K+L+V  DV++  +++RL+   + FG GSRI++
Sbjct: 80  IMEGGHLKLESIYDGM-NMIKGRLGSKKVLVVFYDVDDSDKVQRLVRSYEWFGPGSRIII 138

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRDK++L+++       Y    LE +EA E F   AFK  +  ED    S  +V Y KG
Sbjct: 139 TTRDKQLLDEYGVHAS--YEAKVLEDKEAIELFSWHAFKVQNIREDYVDMSNRLVDYAKG 196

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL LEVLGSSL  K K  W   +  L +    +I+D+   LKIS + L      +FLDI
Sbjct: 197 LPLALEVLGSSLYNKTKDEWKSAIEKLKKNPNRKINDM---LKISLDGLDDSQVEVFLDI 253

Query: 242 ACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           ACF +GE KD +  ILDD     + +L D+ L++IS   + MHD++Q+MG  I+R   EK
Sbjct: 254 ACFLKGEAKDCILRILDDHAEYDIRVLRDRCLITISATRVQMHDLIQQMGWSIIR---EK 310

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
            P KR+RLWD  +I + L   +G + +E I  DLS+ K I ++ + + NM  LR  K Y 
Sbjct: 311 HPSKRTRLWDIDDIHKALSAQEGMEQVEAISYDLSRSKDIQVNKKVYENMKKLRFLKLYW 370

Query: 362 PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVE 421
             ++      SM+     +Y KV LP   ++  ++LRYL+W+ YPL+TLPSNF  +NLVE
Sbjct: 371 GDYH-----GSMTK----TY-KVFLPKDXEFPSQELRYLYWEAYPLQTLPSNFNGENLVE 420

Query: 422 LNLRCSKVEQPWEGEKACVPSSIQNF---KYLSAL-SFKGCQSLRSFPSNLHFVCPVTIN 477
           L++R S ++Q W+G K      I +    + L+ + +++ C+ LRS  S           
Sbjct: 421 LHMRNSTIKQLWKGRKVLGKLKIIDLSDSRLLTKMPNYQACRILRSSTS----------- 469

Query: 478 FSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
                     P + G        QS I+E+PSSIE L  LE L L GC+   +   +F  
Sbjct: 470 ----------PFVKG--------QSGIKEIPSSIEYLPALEFLTLWGCRNFDKFQDNFGN 511

Query: 538 LR-----------------------SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTP 574
           LR                       S   L L  C NLE+FPEI   M+ L+ ++ + T 
Sbjct: 512 LRHRRFIQAKKADIQELPNSFGYLESPQNLCLDDCSNLENFPEI-HVMKRLEILWLNNTA 570

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALS 632
           I ELP++F  L  L+ L++  CS  +  P+  N+GSL +L       +AI +LP S+   
Sbjct: 571 IKELPNAFGCLEALQFLYLSGCSNFEEFPEIQNMGSLRFLRL---NETAIKELPCSIGHL 627

Query: 633 NMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD----YAVREIPQEIAYLSSLEILYL 688
             LR L+  +CK L S P + + GL ++ +L+I+      A  EI +++ +L  L    L
Sbjct: 628 TKLRDLNLENCKNLRSLPNS-ICGLKSLEVLNINGCSNLVAFPEIMEDMKHLGEL---LL 683

Query: 689 SGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI---DCKMLQSLP--- 742
           S      LP  I+ +  LR + L +   L +LP     L +L  +   +C  L +LP   
Sbjct: 684 SKTPITELPPSIEHLKGLRRLVLNNCENLVTLPNSIGNLTHLRSLCVRNCSKLHNLPDNL 743

Query: 743 -VLPFCLESLDLTGCNMLR-SLPELPLCLQYLNLED------------------------ 776
             L  CL  LDL GCN+++ ++P    CL  L   D                        
Sbjct: 744 RSLQCCLRRLDLAGCNLMKGAIPSDLWCLSSLRFLDVSESPIPCIPTNIIQLSNLRTLRM 803

Query: 777 --CNMLRSLPELPLCLQLLTVRNCNRLQSL 804
             C ML  +PELP  L++L    C  + +L
Sbjct: 804 NHCQMLEEIPELPSRLEVLEAPGCPHVGTL 833


>gi|225460149|ref|XP_002276056.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1131

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 349/1046 (33%), Positives = 496/1046 (47%), Gaps = 188/1046 (17%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL---SEKLEVAGPN 76
            KTT+AKAI++  S++F+GS F+++VR  S+       LQ+++L   L   S K+      
Sbjct: 229  KTTIAKAIYNDISYQFDGSSFLNNVRERSKDNA--LQLQQELLHGILKGKSPKVSNMDEG 286

Query: 77   IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
            I    K  +   ++L+V DDV+++ Q++ L  E   FG  SRI++TTR K  L ++  +E
Sbjct: 287  I-QMIKRSLSSKRVLVVFDDVDDLMQIENLAEEHSWFGPRSRIIITTRHKHFLTQYGVKE 345

Query: 137  KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
               Y V  L   EA E F  +AFK+N   E     S  VV Y KG PL LEVLGS L  K
Sbjct: 346  S--YEVPILHDAEAIELFSWWAFKQNLPNEIYKNLSYQVVDYAKGLPLALEVLGSFLFKK 403

Query: 197  RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
              S W   L  L  I    I ++   LKIS++ L    K IFLDIACFF+G+DKDFV+ +
Sbjct: 404  TISEWESALCKLKTIPHMGIQNV---LKISYDGLDDVEKGIFLDIACFFKGKDKDFVSRM 460

Query: 257  LDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
            LD+   +ES +  +L DK L+SISGN L+MHD+LQ+MG +IVRQE  KEPG+RSRLW+ +
Sbjct: 461  LDEDFYAESGI-GVLHDKCLISISGNKLDMHDLLQQMGWEIVRQECPKEPGRRSRLWEQE 519

Query: 314  EISRVLKHNKGTDAIEGIFLDLSKIKGI-NLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
            +I  VLK N G++ IEGIFLDLS ++ I +    AF  M  LRL K Y  K    +   +
Sbjct: 520  DIFDVLKRNMGSEKIEGIFLDLSHLEDILDFTTEAFAGMKKLRLLKVYNSKSILGDFGDT 579

Query: 373  MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
             +   +++  +V+  +   +    LRYL+W  Y L++LP +F PK+LV+L++  S +++ 
Sbjct: 580  FTFNNKVN-CRVRFAHEFKFCSDDLRYLYWHGYSLKSLPKDFSPKHLVDLSMPYSHIKKL 638

Query: 433  WEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
            W                      KG + L+S  S         ++ S+   LIE P  SG
Sbjct: 639  W----------------------KGIKVLKSLKS---------MDLSHSKCLIETPDFSG 667

Query: 493  --KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
               + RL L G   + EV  S+  L  L  L L+ CK L+R+ +     +SL TLIL GC
Sbjct: 668  ITNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCKMLRRLPSRIWNFKSLRTLILSGC 727

Query: 550  LNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
               E FPE    +E LK ++ D T +  LP S  ++  L+ L    C           S 
Sbjct: 728  SKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRNLKKLSFRGCGP--------ASA 779

Query: 610  EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA 669
             +L+   ++ S    +PSS  L   L+ LD S C                    +ISD A
Sbjct: 780  SWLWSKRSSNSICFTVPSSSNLC-YLKKLDLSDC--------------------NISDGA 818

Query: 670  VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY 729
                   + +LSSLE L LSGNNF +LP +   +S L F+ LE+                
Sbjct: 819  NL---GSLGFLSSLEDLNLSGNNFVTLPNM-SGLSHLVFLGLEN---------------- 858

Query: 730  LHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLC 789
                 CK LQ+LP  P  LE L L G N + +LP         N+   + L++L      
Sbjct: 859  -----CKRLQALPQFPSSLEDLILRGNNFV-TLP---------NMSGLSHLKTL------ 897

Query: 790  LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCL 849
                 + NC RL++LP++                         P S++S       T+C 
Sbjct: 898  ----VLGNCKRLEALPQL-------------------------PSSIRS----LNATDCT 924

Query: 850  KLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQ 909
             L          +SL  +R   + SL                    V+PGS IPDW   Q
Sbjct: 925  SLG-------TTESLKLLRPWELESLD--------------SDVAFVIPGSRIPDWIRYQ 963

Query: 910  SSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLS-ETK- 967
            SS + I   LP + S  N +GFA   V  S+   S    + +     D      S ET+ 
Sbjct: 964  SSENVIEADLPLNWST-NCLGFALALVFSSQPPVS---HWLWAEVFLDFGTCCCSIETQC 1019

Query: 968  --HVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCG 1025
              H++ G N     ++   D V+L + P      P    H  ATF   +E   Y+IKRCG
Sbjct: 1020 FFHLE-GDNCVLAHEV---DHVLLNYVPVQPSLSPHQVIHIKATFAITSETG-YEIKRCG 1074

Query: 1026 LCPVYANPSETKDNTFTINFATEVWK 1051
            L  VY N     +N    N +T V K
Sbjct: 1075 LGLVYVNEEVNCNNVPPPNESTLVLK 1100


>gi|37781360|gb|AAP44394.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 980

 Score =  370 bits (951), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 304/954 (31%), Positives = 463/954 (48%), Gaps = 152/954 (15%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S  V+ +GI GM G+GKTTLA+ I+D    +F+G+CF+ +VR  S   G LE LQ+ +L
Sbjct: 46  GSGGVRFLGILGMSGVGKTTLARVIYDNIRSQFQGTCFLHEVRDRSAKQG-LERLQEILL 104

Query: 63  STTLS-EKLEV----AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           S  L  +KL +     G N+    K+R+R  K+L+VLDDV+ + QL  L GE + FG GS
Sbjct: 105 SEILVVKKLRINDLFEGANM---QKQRLRYKKVLLVLDDVDHIDQLDTLAGEREWFGDGS 161

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI++TT+DK +L K+  E +KIYR+  L+  E+ + F   AFK+NH  ++    S  V+ 
Sbjct: 162 RIIITTKDKHLLVKY--ETEKIYRMGTLDKYESLQLFKQHAFKKNHPTKEFEDLSAQVIE 219

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           +T G P+ L+VLGS L  +    W   L ++ R+ +   ++I   L+ SF  L    + I
Sbjct: 220 HTGGLPVALKVLGSFLYGRGLDEW---LSEVERLKQIPQNEILKKLEPSFIGLNNIEQKI 276

Query: 238 FLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FLDIACFF G+ KD V  IL+    S    + +L++K L++I    + +H ++Q+MG  I
Sbjct: 277 FLDIACFFSGKKKDSVTRILESFHFSPVIGIKVLMEKCLITILQGRIAIHQLIQDMGWHI 336

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VR+E+   P   SRLW  ++I  VL+ N  TD IEGI L L+  + +N   +AF  M++L
Sbjct: 337 VRREASYNPRICSRLWKREDICPVLERNLATDKIEGISLHLTNEEEVNFGGKAFMQMTSL 396

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           R  KF                          +  G ++LP +LR+L W  YP ++LP++F
Sbjct: 397 RFLKF----------------------RNAYVCQGPEFLPDELRWLDWHGYPSKSLPNSF 434

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
           K   LV L L+ S++ Q W+  K      +   KY+                        
Sbjct: 435 KGDQLVSLTLKKSRIIQLWKTSK-----DLGKLKYM------------------------ 465

Query: 475 TINFSYCVNLIEFPQIS--GKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
             N S+   LI  P  S    + RL L +  ++ E+  SI  L  L +L+L+ C+ LK +
Sbjct: 466 --NLSHSQKLIRTPDFSVMPNLERLVLEECKSLVEINFSIGDLGKLVLLNLKNCRNLKTL 523

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
                +L  L  L+L GC  L  FPEI EKM  L  +Y   T ++EL +S ENL G+ V+
Sbjct: 524 PKRI-RLEKLEILVLSGCSKLRTFPEIEEKMNCLAELYLGATALSELSASVENLSGVGVI 582

Query: 592 FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
            +  C  L++LP +I  L+                        L++LD S C  L++ P 
Sbjct: 583 NLCYCKHLESLPSSIFRLK-----------------------CLKTLDVSGCSKLKNLPD 619

Query: 652 TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF-IH 710
              L L  +   H +  A++ IP  I+ L +L+ L L G N  S         Q    ++
Sbjct: 620 DLGL-LVGLEEFHCTHTAIQTIPSSISLLKNLKHLSLRGCNALSSQVSSSSHGQKSVGVN 678

Query: 711 LEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC-- 768
            ++ + L SL  + L L   ++ D  +L +L  LP  L  L L G N   ++P   +   
Sbjct: 679 FQNLSGLCSL--IMLDLSDCNISDGGILSNLGFLP-SLAGLILDG-NNFSNIPAASISRL 734

Query: 769 --LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHS 826
             L+ L L  C  L SLPELP  ++ +    C  L S+ ++         S+L ++S   
Sbjct: 735 TRLEILALAGCRRLESLPELPPSIKEIYADECTSLMSIDQL------TKYSMLHEVS--- 785

Query: 827 PDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEK 886
                             FT C +L     +  + DSLL+  H  +              
Sbjct: 786 ------------------FTKCHQLVTNKQHASMVDSLLKQMHKGLY------------- 814

Query: 887 LSELRGSL-IVLPGSEIPDWFSNQSSGS-SICIQLPPHSSCRNLIGFAFCAVLD 938
              L GS  + +PG EIP+WF+ ++SG+ SI + LP +       G A C V D
Sbjct: 815 ---LNGSFSMYIPGVEIPEWFTYKNSGTESISVALPKNWYTPTFRGIAICVVFD 865


>gi|224105385|ref|XP_002333825.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838630|gb|EEE76995.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 920

 Score =  370 bits (951), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 271/764 (35%), Positives = 403/764 (52%), Gaps = 101/764 (13%)

Query: 10  VGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK 69
           +GI GMGG+GKTT+A+ ++D+   +FEGSCF+++V+ +     G   LQ+Q+LS  L E+
Sbjct: 158 IGICGMGGLGKTTVARVVYDRIRWQFEGSCFLANVKEDFAREDGPRRLQEQLLSEILMER 217

Query: 70  LEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRV 128
             V          K R+R  K+L++LDDV+E  QL+ L  E   FG GSRI++T+RDK+V
Sbjct: 218 ASVWDSYRGIEMIKRRLRLKKILLILDDVDEKEQLEFLAAESKWFGPGSRIIITSRDKQV 277

Query: 129 LEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEV 188
           L   R    +IY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV
Sbjct: 278 LT--RNGVARIYEAEKLNDDDALTLFSQKAFKNDQPAEDFVELSKQVVGYATGLPLALEV 335

Query: 189 LGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGE 248
           +GS +  +    WG  ++ LN I + EI    D+L+ISF+ L    K IFLDIACF  G 
Sbjct: 336 IGSFMHGRSILEWGSAINRLNDIPDREI---IDVLRISFDGLHESDKKIFLDIACFLMGF 392

Query: 249 DKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGK 305
             D +  IL+    +    + +LI++SL+S+S + + MH++LQ MG++IVR ES +EPG+
Sbjct: 393 KIDRITRILESRGFNAGIGISVLIERSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGR 452

Query: 306 RSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFY 365
           RSRLW  K++   L  N G + IE IFLD+  IK    + +AF+ MS LRL K +     
Sbjct: 453 RSRLWTYKDVCLALMDNTGKEKIEAIFLDMPGIKEAQWNMKAFSKMSRLRLLKIH----- 507

Query: 366 EIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLR 425
                             VQL  G + L  +LR+L W++YP ++LP+ F+   LVEL++ 
Sbjct: 508 -----------------NVQLSEGPEALSNELRFLEWNSYPSKSLPACFQMDELVELHMA 550

Query: 426 CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLI 485
            S +EQ W G             Y SA++ K                   IN S  +NLI
Sbjct: 551 NSSIEQLWYG-------------YKSAVNLK------------------IINLSNSLNLI 579

Query: 486 EFPQISGKVTRLYL---GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLV 542
           + P ++G +    L   G +++ EV  S+     L+ ++L  CK + RI  +  ++ SL 
Sbjct: 580 KTPDLTGILNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVKCKSI-RILPNNLEMESLK 638

Query: 543 TLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC------ 596
              L GC  LE FP+I+  M  L  +  D T IT+L SS  +L GL +L +  C      
Sbjct: 639 VCTLDGCSKLEKFPDIVGNMNCLTVLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESI 698

Query: 597 ------------------SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSL 638
                             S+L  +P+N+G +E L     + ++I QLP+S+ L   L+ L
Sbjct: 699 PSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQLPASIFLLKNLKVL 758

Query: 639 DSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPA 698
            S  C+ +   P       S  GL ++       +P++I Y SSL  L LS NNF SLP 
Sbjct: 759 SSDGCERIAKLP-------SYSGLCYLEG----ALPEDIGYSSSLRSLDLSQNNFGSLPK 807

Query: 699 IIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
            I Q+S+L  + L+D  ML+SLPE+P  ++ ++L  C  L+ +P
Sbjct: 808 SINQLSELEMLVLKDCRMLESLPEVPSKVQTVNLNGCIRLKEIP 851



 Score = 40.0 bits (92), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 21/228 (9%)

Query: 630 ALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS 689
           ALSN LR L+ +     +S P  F   +  +  LH+++ ++ ++        +L+I+ LS
Sbjct: 517 ALSNELRFLEWNSYPS-KSLPACF--QMDELVELHMANSSIEQLWYGYKSAVNLKIINLS 573

Query: 690 GN-NFESLPAIIKQMSQLRFIHLEDFNMLQSL-PELP--LCLKYLHLIDCKMLQSLPVLP 745
            + N    P +   ++ L  + LE    L  + P L     L+Y++L+ CK ++ LP   
Sbjct: 574 NSLNLIKTPDLTGILN-LESLILEGCTSLSEVHPSLAHHKKLQYVNLVKCKSIRILPN-N 631

Query: 746 FCLESLD---LTGCNMLRSLPELPL---CLQYLNLEDCNMLRSLPELP--LCLQLLTVRN 797
             +ESL    L GC+ L   P++     CL  L L++  + +    +   + L LL++ +
Sbjct: 632 LEMESLKVCTLDGCSKLEKFPDIVGNMNCLTVLCLDETGITKLCSSIHHLIGLGLLSMNS 691

Query: 798 CNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEF 845
           C  L+S+P  + CL+ L    L   S    +L++ PE+L       EF
Sbjct: 692 CKNLESIPSSIGCLKSLKKLDLSGCS----ELKYIPENLGKVESLEEF 735


>gi|105922468|gb|ABF81418.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 581

 Score =  370 bits (950), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 221/511 (43%), Positives = 301/511 (58%), Gaps = 45/511 (8%)

Query: 15  MGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL-SEKLEVA 73
           MGGIGKTT+A+A+F+  S ++E  CF+++VR  SE  GGL  L+++ LS  L  E L + 
Sbjct: 1   MGGIGKTTIAEAVFNSISSQYESCCFITNVREKSEECGGLIRLREEFLSRVLEQENLRID 60

Query: 74  GPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKF 132
            P +     KER+R  K+  VLDDV++V Q++ LI   D FG GSRI+VT+RD++VL+  
Sbjct: 61  TPRMGSTLIKERIRHKKVFTVLDDVSDVEQVECLIERHDMFGPGSRILVTSRDRQVLKNV 120

Query: 133 RGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSS 192
             E   IY V  L   EA + F    FK NH P+D    S   V+Y KGNPL L+VLGS 
Sbjct: 121 ADE---IYEVEELNCSEARQLFSLSVFKGNHIPKDYKGLSIRAVNYAKGNPLALKVLGSF 177

Query: 193 LCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDF 252
           L  +RK  W   L+ L R  + +I   Y++LK+SF+ L    K+IFLDIACFF+G+  D+
Sbjct: 178 LFDQRKEDWENALNKLERNPQLKI---YNMLKVSFDALGDEEKNIFLDIACFFKGKQIDY 234

Query: 253 VASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRL 309
           V  ILD    S +  +  L ++ L++IS   L MHD+LQEM  +IVRQES KE GKRSRL
Sbjct: 235 VKRILDGCGFSTNIGVFFLAERCLITISNGKLEMHDLLQEMAFEIVRQESIKELGKRSRL 294

Query: 310 WDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEK 369
           W P+++++VL  N GT+ +EGIF D SKIK I L  +AF  M NLRL K Y         
Sbjct: 295 WSPRDVNQVLTKNLGTEKVEGIFFDTSKIKEIKLSSKAFARMYNLRLLKIY--------- 345

Query: 370 LPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKV 429
                  E     KV LP+GL  L  +LRYLHWD YPL++LPSNF P+NLVELNL  SKV
Sbjct: 346 -----NSEVGKNCKVYLPHGLKSLSDELRYLHWDGYPLKSLPSNFHPENLVELNLSHSKV 400

Query: 430 EQPWEGEKAC-------------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
            + W+G++                     +P SI +   L AL+ + C+ L + P ++  
Sbjct: 401 RELWKGDQMYPETTEHVMYLNFNETAIKELPQSIGHRSRLVALNLRECKQLGNLPESICL 460

Query: 471 VCPVTI-NFSYCVNLIEFPQISGKVTRLYLG 500
           +  + I + S C N+ +FP I G     + G
Sbjct: 461 LKSIVIVDVSGCSNVTKFPNIPGNTRSPFFG 491


>gi|224116168|ref|XP_002331978.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832102|gb|EEE70579.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1028

 Score =  369 bits (948), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 263/737 (35%), Positives = 396/737 (53%), Gaps = 68/737 (9%)

Query: 15  MGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAG 74
           MGGIGKTT+A+ ++D+F  +F+GSCF+++VR   +   G   LQ+Q++S  L ++  +  
Sbjct: 1   MGGIGKTTVARVVYDRFRWQFKGSCFLANVREVFDEKDGPRRLQEQLVSEILMKRANICD 60

Query: 75  PNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFR 133
            +      K +++R K+LIVLDDV++  QL+ L  E   FG GSRI++T+RD++VL   R
Sbjct: 61  SSRGIEMIKRKLQRKKILIVLDDVDDRKQLESLAAESKWFGPGSRIIITSRDRQVLT--R 118

Query: 134 GEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSL 193
               +IY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV+GS +
Sbjct: 119 NGVARIYEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFM 178

Query: 194 CLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFV 253
             +    WG  ++ LN I + EI    D+L+ISF+ L    K IFLDIACF +G  KD +
Sbjct: 179 HGRSILEWGSAINRLNEIPDREI---IDVLRISFDGLHELEKKIFLDIACFLKGFKKDRI 235

Query: 254 ASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLW 310
             ILD           +LI+KSL+S+S + + MH++LQ MG++IVR ES +EPG+RSRLW
Sbjct: 236 IRILDSCGFHAHIGTQVLIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLW 295

Query: 311 DPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
             +++   L  N G + IE IFLD+  IK    + +AF+ MS LRL K            
Sbjct: 296 TYEDVCLALMDNTGKEKIEAIFLDIPGIKEAQWNMKAFSKMSKLRLLKI----------- 344

Query: 371 PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
                      + VQL  G + L  KLR+L W +YP ++LP+  +   LVEL++  S +E
Sbjct: 345 -----------NNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIE 393

Query: 431 QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
           Q W G K+ V   I                               IN S  + L + P +
Sbjct: 394 QLWYGYKSAVKLKI-------------------------------INLSNSLYLSKSPDL 422

Query: 491 SG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL 547
           +G   +  L L G  ++ EV  S+     L+ ++L  C+ + RI  S  ++ SL    L 
Sbjct: 423 TGIPNLESLILEGCISLSEVHPSLGRHKKLQYVNLINCRSI-RILPSNLEMESLKFFTLD 481

Query: 548 GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
           GC  LE+FP+I+  M  L ++  DRT I EL  S  ++ GLEVL + +C KL+++  +I 
Sbjct: 482 GCSKLENFPDIVGNMNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISRSIE 541

Query: 608 SLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL-GLSAMGLLHI 665
            L+ L  + L+  S +  +P ++     L   D S     +     FLL  L+ + L  +
Sbjct: 542 CLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKNLAVLSLDGL 601

Query: 666 SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
               +R +P++I  LSSL+ L LS NNF SLP  I Q+S L  + LED  ML+SL E+P 
Sbjct: 602 RACNLRALPEDIGCLSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTMLESLLEVPS 661

Query: 726 CLKYLHLIDCKMLQSLP 742
            ++ ++L  C  L+++P
Sbjct: 662 KVQTVNLNGCISLKTIP 678


>gi|359493349|ref|XP_002277814.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1260

 Score =  367 bits (942), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 262/739 (35%), Positives = 389/739 (52%), Gaps = 112/739 (15%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V++VGIWGMGGIGKTTLA+AI++Q S +FEG CF+ +V      + G ++L+K++LS  L
Sbjct: 217 VRMVGIWGMGGIGKTTLARAIYEQISGQFEGCCFLPNVE--HLASKGDDYLRKELLSKVL 274

Query: 67  SEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
            +K ++V   ++    K R    K+LIV+D+VN    LK L+GELD FG  SRI++TTRD
Sbjct: 275 RDKNIDVTITSV----KARFHSKKVLIVIDNVNHRSILKTLVGELDWFGPQSRIIITTRD 330

Query: 126 KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVSYTKGNPL 184
           K VL    G +  IY V  L+ ++A E F + AF  NH P ED+   S+ V++Y +G PL
Sbjct: 331 KHVL-TMHGVDV-IYEVQKLQDDKAIELFNHHAFI-NHPPTEDVMELSQRVIAYAQGLPL 387

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            LEVLGSSLC K K  W   L+ L +I + EI  +   L+ SF++L    K+IFLDIA F
Sbjct: 388 ALEVLGSSLCKKSKDEWECALNKLEKIPDMEIRKV---LQTSFDELDDDQKNIFLDIAIF 444

Query: 245 FEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F   ++DF   +L+    S    +  LIDKSL+    + L+MHD+L EMG++IVR+ S K
Sbjct: 445 FNEVEEDFTTEMLNSFGFSAISGIRTLIDKSLIGNLDDELHMHDLLIEMGKEIVRRTSPK 504

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
           EPGKR+RLW+ ++I  VL+ N GTD +E I  +LS +K I     AF NMS LRL   + 
Sbjct: 505 EPGKRTRLWEQQDICHVLEKNTGTDEVEVIDFNLSGLKEICFTTEAFGNMSKLRLLAIHE 564

Query: 362 PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVE 421
               +  +  S     +L   +V + +   +   +LR+L W+ YPL++LPS+FK +NLV 
Sbjct: 565 SSLSDDSECSS-----RLMQCQVHISDDFKFHYDELRFLLWEEYPLKSLPSDFKSQNLVY 619

Query: 422 LNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC 481
           L++  S + + WEG K       +N KY                          I+ S  
Sbjct: 620 LSMTKSHLTRLWEGNKV-----FKNLKY--------------------------IDLSDS 648

Query: 482 VNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSL 541
             L E P  S                      +T+L++L   GC +L +I +S   L  L
Sbjct: 649 KYLAETPDFSR---------------------VTNLKMLSFEGCTQLHKIHSSLGDLDKL 687

Query: 542 VTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDN 601
             L    C+NLEHFP                          + L  LE L +  CSKL+ 
Sbjct: 688 CRLNFKNCINLEHFP------------------------GLDQLVSLEALNLSGCSKLEK 723

Query: 602 LPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMG 661
            P     +  L  +    +AI++LPSS+A +  L  LD  +C+ L S P + +  L+ + 
Sbjct: 724 FPVISQPMHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEKLLSLPSS-ICKLAHLE 782

Query: 662 LLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP 721
            L +S  +    PQ            ++ +N ++LP I+ ++S LR + L+D   L++LP
Sbjct: 783 TLSLSGCSRLGKPQ------------VNSDNLDALPRILDRLSHLRELQLQDCRSLRALP 830

Query: 722 ELPLCLKYLHLID-CKMLQ 739
            LP  ++ ++  D C  L+
Sbjct: 831 PLPSSMELINASDNCTSLE 849



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 197/507 (38%), Gaps = 131/507 (25%)

Query: 570  SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSV 629
            SD   + E P  F  +  L++L  E C++L  +  ++G L+ L                 
Sbjct: 646  SDSKYLAETPD-FSRVTNLKMLSFEGCTQLHKIHSSLGDLDKLC---------------- 688

Query: 630  ALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS 689
                    L+  +C  LE FP     GL                      L SLE L LS
Sbjct: 689  -------RLNFKNCINLEHFP-----GLDQ--------------------LVSLEALNLS 716

Query: 690  G-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY------LHLIDCKMLQSLP 742
            G +  E  P I + M  L  +  +      ++ ELP  + Y      L L +C+ L SLP
Sbjct: 717  GCSKLEKFPVISQPMHCLSKLCFDG----TAITELPSSIAYATKLVVLDLQNCEKLLSLP 772

Query: 743  VLPFC----LESLDLTGCNML-------RSLPELPLCL------QYLNLEDCNMLRSLPE 785
                C    LE+L L+GC+ L        +L  LP  L      + L L+DC  LR+LP 
Sbjct: 773  S-SICKLAHLETLSLSGCSRLGKPQVNSDNLDALPRILDRLSHLRELQLQDCRSLRALPP 831

Query: 786  LPLCLQLLTVR-NCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFE 844
            LP  ++L+    NC  L+ +                              S +S  +CF 
Sbjct: 832  LPSSMELINASDNCTSLEYI------------------------------SPQSVFLCFG 861

Query: 845  ---FTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSL-IVLPGS 900
               F NC +L  K  +K+       +R MA    +  ++ A +++   ++     V PGS
Sbjct: 862  GSIFGNCFQLT-KYQSKMGP----HLRRMATHFDQDRWKSAYDQQYPNVQVPFSTVFPGS 916

Query: 901  EIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEI 960
             IPDWF + S G  + I + P     + +GFA  AV+  K  D    R +      DL  
Sbjct: 917  TIPDWFMHYSKGHEVDIDVDPDWYDSSFLGFALSAVIAPK--DGSITRGWSTYCNLDLHD 974

Query: 961  KTLSETKHVDLGYNSRY-------IED-LIDSDRVILGFKPCLNVGFPDGYHHTIATFKF 1012
                     +  +   +       +ED  I+SD + L + P   +GF D     I  F F
Sbjct: 975  LNSESESESESSWVCSFTDARTCQLEDTTINSDHLWLAYVPSF-LGFNDKKWSRIK-FSF 1032

Query: 1013 FAERKFYKIKRCGLCPVYANPSETKDN 1039
               RK   +K  G+CP+Y   S + DN
Sbjct: 1033 STSRKSCIVKHWGVCPLYIEGS-SDDN 1058


>gi|224127254|ref|XP_002329438.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870488|gb|EEF07619.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1162

 Score =  367 bits (941), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 340/1052 (32%), Positives = 510/1052 (48%), Gaps = 183/1052 (17%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            +S   +IVGIWGMGGIGKTT+AK + D+    F+G  F  + R  S+       LQ+  L
Sbjct: 212  NSPDFRIVGIWGMGGIGKTTIAKVVCDKVRSRFDG-IFFGNFRQQSD-------LQRSFL 263

Query: 63   STTLSEKLEVAG----PNIPHFTKERVRRMKLLIVLDDVNEVGQLKR----LIGELDQFG 114
            S  L +++   G     +I  F + R+ R+K+ IV+DDV+    L+     L G    FG
Sbjct: 264  SQLLGQEILNRGLLSFRDI--FVRNRLCRIKVFIVMDDVDNSMALEEWRDLLDGRNSSFG 321

Query: 115  QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
             GS++++T+RDK+VL+    +    Y+V GL +E+A + F + A K      D     + 
Sbjct: 322  PGSKVLITSRDKQVLKNVVDQ---TYKVVGLNYEDAIQLFSSKALKNCTPTIDQRDLIKQ 378

Query: 175  VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
            +  + +GNPL L+VLGSS   K    W   L+ L     ++   I   L+IS++ L    
Sbjct: 379  IARHVQGNPLALKVLGSSFYGKSIEEWRSALNKL-----AQDPQIEKALRISYDGLDSEQ 433

Query: 235  KSIFLDIACFFEGEDKDFVASILD--DSESDVLDI--LIDKSLV-------SISGN-FLN 282
            KSIFLDIA FF    +D    ILD     S   DI  LIDK L+       S+ GN  L 
Sbjct: 434  KSIFLDIAHFFIIWKQDKATRILDCVYGRSVKFDISTLIDKCLITTDNRLNSVDGNERLE 493

Query: 283  MHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGI 341
            MHD+L+EM   IVR ES+  PG+RSRL  P +  +VL+ NKGT  I+GI L++S + + I
Sbjct: 494  MHDLLEEMAFNIVRAESDF-PGERSRLCHPPDFVQVLEENKGTQKIKGISLEVSMLSRHI 552

Query: 342  NLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLH 401
            +L    F  M  LR   F              S++E   Y     P GL+YLP +LRYL 
Sbjct: 553  HLKSDTFAMMDGLRFLNFD----------HDGSSQE---YKMHLPPTGLEYLPNELRYLR 599

Query: 402  WDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSL 461
            WD +P ++LP +F+ ++LVEL L  SK+ + W G K      + N +             
Sbjct: 600  WDEFPSKSLPPSFRAEHLVELRLPKSKLVRLWTGVK-----DVGNLR------------- 641

Query: 462  RSFPSNLHFVCPVTINFSYCVNLIEFPQIS--GKVTRLYLGQ-SAIEEVPSSIECLTDLE 518
                         TI+ S    L E P +S    +  L LG+  ++ EVPSS++ L  LE
Sbjct: 642  -------------TIDLSESPYLTELPDLSMAKNLVCLRLGRCPSLTEVPSSLQYLDKLE 688

Query: 519  VLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITEL 578
             +DL  C  L+       K+   +++ L  CL+L   P I + M  L+    ++T I E+
Sbjct: 689  EIDLNRCYNLRSFPMLDSKVLRKLSIGL--CLDLTTCPTISQNMVCLRL---EQTSIKEV 743

Query: 579  PSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSL 638
            P S      L+VL +  CSK+   P+  G +E L      +  I ++PSS+     L  L
Sbjct: 744  PQSVTG--KLKVLDLNGCSKMTKFPEISGDIEQLRL----SGTIKEMPSSIQFLTRLEML 797

Query: 639  DSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ-EIAYLSSLEILYLSGNNFESLP 697
            D S C  LESFP    + + ++  L +S   ++EIP     +++SL  L L G   + LP
Sbjct: 798  DMSGCSKLESFPE-ITVPMESLRYLFLSKTGIKEIPSISFKHMTSLNTLNLDGTPLKELP 856

Query: 698  AIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCN 757
            + I+ +++L  ++L   + L+S PE+ + +K L +++                L  TG  
Sbjct: 857  SSIQFLTRLYELNLSGCSKLESFPEITVPMKSLEVLN----------------LSKTGIK 900

Query: 758  ML-RSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDA 816
             +  SL +  + L+ LNL D   +++LPELP  L+ LT R+C  L++   I+        
Sbjct: 901  EIPSSLIKHLISLRCLNL-DGTPIKALPELPSLLRKLTTRDCASLETTISII-------- 951

Query: 817  SVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLR 876
                              +  S     +FTNC KL+ K         L+ + H+ I S  
Sbjct: 952  ------------------NFSSLWFGLDFTNCFKLDQKP--------LVAVMHLKIQS-- 983

Query: 877  LGYEMAINEKLSELRGSL-IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCA 935
             G E+          GS+ +VLPGSEIP+WF ++  GSS+ IQLP  S+C  L G AFC 
Sbjct: 984  -GEEIP--------DGSIQMVLPGSEIPEWFGDKGVGSSLTIQLP--SNCHQLKGIAFCL 1032

Query: 936  V----LDSK----KVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLI----- 982
            V    L S+    +VD D      V F + ++ K      + ++ + SR    L+     
Sbjct: 1033 VFLLPLPSQDMPCEVDDDS--QVLVFFDYHVKSKNGEHDGNDEVVFGSRLRFALLFSLKT 1090

Query: 983  -DSDRVILGFKPCLNVGFPDGYHHTIATFKFF 1013
             DSD +IL ++  L V     Y     TFKF+
Sbjct: 1091 CDSDHMILHYELEL-VKHLRKYSGNEVTFKFY 1121


>gi|359493275|ref|XP_002272079.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
 gi|296081003|emb|CBI18507.3| unnamed protein product [Vitis vinifera]
          Length = 1281

 Score =  366 bits (940), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 293/813 (36%), Positives = 424/813 (52%), Gaps = 98/813 (12%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            SS+ V+++GI+G+GGIGKTT+AK ++++ +  F  + F+++VR +S++ G L   ++ + 
Sbjct: 212  SSNEVRMIGIYGLGGIGKTTVAKVVYNRIAPLFMITSFIANVREDSKSRGLLHLQKQLLH 271

Query: 63   STTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
                S K  ++  +   H  ++R+    +L++LDDV+ + QL+ L G+ + FG GSRI+V
Sbjct: 272  EILPSRKNFISNVDEGIHMIQDRLCFKSVLLILDDVDTLDQLEGLAGDCNWFGPGSRIIV 331

Query: 122  TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
            TTRD+ +L+  + +    Y V  L+  EA E F   AF++ H  ED    S S+V    G
Sbjct: 332  TTRDRHLLDVHKMD--AFYEVKKLDQMEAIELFSQHAFEQKHPKEDYETLSNSMVRCVDG 389

Query: 182  NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
             PL L+VLG  L  K    W   L  L +    EI  +   LK S+++L    K IFLD+
Sbjct: 390  LPLGLKVLGRFLFGKTILEWKSELQKLKQEPNQEIQGV---LKRSYDELDLTQKDIFLDV 446

Query: 242  ACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
            ACFF GEDKD V  ILD     +ES +  +L DK L++I  N + MHD+LQ+MGR IVRQ
Sbjct: 447  ACFFNGEDKDHVTRILDACNFYAESGI-RVLGDKCLITIFDNKILMHDLLQQMGRYIVRQ 505

Query: 298  ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS--KIKGINLDPRAFTNMSNLR 355
            +    P K SRL  P +++RVL    GT+AIEGI  DLS  K K I++  ++F  M+ LR
Sbjct: 506  DYPNYPEKWSRLCYPDDVNRVLIRKSGTEAIEGILFDLSIPKRKRIDITTKSFEMMTRLR 565

Query: 356  LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
            L K Y           S+S  E    +KV+L    ++   +LRYL+W  YPL +LPS+F 
Sbjct: 566  LLKIYWAH-------GSISIRED---NKVKLSKDFEFPSYELRYLYWHGYPLESLPSSFY 615

Query: 416  PKNLVELNLRCSKVEQPWEGEK-----------------------------------AC- 439
             ++L+EL++  S ++Q WE ++                                    C 
Sbjct: 616  AEDLIELDMCYSSLKQLWESDEPLEKLNTIRVSFSQHLMEIPDFSVRAPNLEKLILDGCS 675

Query: 440  ----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT 495
                V  SI   K +  L+ K C+ L SFPS         +NF+ C  L +FP I   + 
Sbjct: 676  SLLEVHPSIGRLKKIIVLNLKNCKQLSSFPSITDMEALEILNFAGCSELKKFPDIQCNME 735

Query: 496  ---RLYLGQSAIEEVPSSI-ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
               +LYL  +AIEE+PSSI + +T L +LDL+ CK L  + T   KL+SL  L L GC  
Sbjct: 736  HLLKLYLSSTAIEELPSSIGQHITGLVLLDLKRCKNLTSLPTCIFKLKSLEYLFLSGCSK 795

Query: 552  LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG------------------------ 587
            LE+FPEI+E ME+LK +  D T I  LPSS E L G                        
Sbjct: 796  LENFPEIMEDMENLKELLLDGTSIEVLPSSIERLKGLVLLNLRKCKKLVSLPDSMCNLRS 855

Query: 588  LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
            L+ + V  CS+LD LP N+GSL++L  + A  +AI Q P S+ L   LR L    CK L 
Sbjct: 856  LQTIIVSGCSQLDQLPKNVGSLQHLVQLHADGTAIRQPPDSIVLLRGLRVLIYPGCKILP 915

Query: 648  SFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-----NNFESLPAIIKQ 702
            S   + L     +     +   +R +P     LSSL  L  S      NNF S+P  I  
Sbjct: 916  SSSLSSLFSFWLLHGRGSNGIGLR-LPS-FPCLSSLTNLNQSSCNPSRNNFLSIPTSISA 973

Query: 703  MSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
            ++ LR + L     L  +PELP  +  ++  DC
Sbjct: 974  LTNLRDLWLGQCQNLTEIPELPPSVPDINSRDC 1006


>gi|359495276|ref|XP_002276447.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1542

 Score =  366 bits (939), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 305/876 (34%), Positives = 430/876 (49%), Gaps = 162/876 (18%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S+ V +VGI+G GGIGKTT+AK ++++   +F  + F+++VR +S++ G L +LQKQ+L 
Sbjct: 421  SNNVHMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANVREDSKSRG-LLYLQKQLLH 479

Query: 64   TTLSEK---LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
              L ++   +      I H  K+R+   K+L+VLDDV+++ QL+ L G+ + FG GSRI+
Sbjct: 480  DILPKRKNFIRNVDEGI-HMIKDRLCFKKVLLVLDDVDDLNQLEALAGDHNWFGPGSRII 538

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            VTTRDK +LE    E   +Y    L+ +EA E FC  AFK+NH  ED    S SVV Y  
Sbjct: 539  VTTRDKHLLEVH--EIDALYEAKKLDHKEAVELFCWNAFKQNHPKEDYETLSNSVVHYVN 596

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            G PL L+VLG  L  K    W   L  L R    EI  +   LK S++ L    + IFLD
Sbjct: 597  GLPLGLKVLGCFLYGKTVCQWESELQKLQREPNQEIQRV---LKRSYDVLDYTQQQIFLD 653

Query: 241  IACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
            +ACFF GEDKDFV  ILD     +ES +  +L DK  ++I  N + MHD+LQ+MGR IVR
Sbjct: 654  VACFFNGEDKDFVTRILDACNFYAESGI-GVLGDKCFITILDNKIWMHDLLQQMGRDIVR 712

Query: 297  QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
            QE  K+PGK SRL  P+ ++RVL    GT+AIEGI L+LS++  I++   AF  M NLRL
Sbjct: 713  QECPKDPGKWSRLCYPEVVNRVLTRKMGTEAIEGILLNLSRLMRIHISTEAFAMMKNLRL 772

Query: 357  FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
             K Y    Y   +            +KV+L    ++   +LRYLHW  YPL +LP  F  
Sbjct: 773  LKIYWDLEYAFMR----------EDNKVKLSKDFEFPSYELRYLHWHGYPLESLPLGFYA 822

Query: 417  KNLVELNLRCSKVEQPWEGE---------KACVPS---SIQNFKYLSALSFKGCQS---- 460
            ++LVEL++  S +++ WEG+         K         I +  Y +   F G ++    
Sbjct: 823  EDLVELDMCYSSLKRLWEGDLLVEKLNTIKVSFSQHLIEIPDMTYNTMGCFNGTRNSSNS 882

Query: 461  -LRSFPSNLHFVCPVTIN------------------FSYCVNLIEF-PQISGKVTRLYLG 500
                 PS +   C +  N                     C +L+E  P I      + L 
Sbjct: 883  LFNQIPSQI--PCAIARNSASALLRATTDCFLLRHILDGCSSLLEVHPSIGKLNKLILLN 940

Query: 501  QSAIEEV---PSSIECLTDLEVLDLRGCKRLKR--------------------------- 530
                +++   PS I+ +  LE+L+  GC  LK+                           
Sbjct: 941  LKNCKKLICFPSIID-MKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSS 999

Query: 531  ---------ISTSFCK-LRSLVTLI----------LLGCLNLEHFPEILEKMEHLKRIYS 570
                     +   +CK L+SL T I          L GC  LE FPE++E M++LK +  
Sbjct: 1000 IGHLTGLVLLDLKWCKNLKSLSTSICKLKSLENLSLSGCSKLESFPEVMENMDNLKELLL 1059

Query: 571  DRTPITELPSSFENLPG------------------------LEVLFVEDCSKLDNLPDNI 606
            D TPI  LPSS E L G                        LE L V  C +L+NLP N+
Sbjct: 1060 DGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCNLTSLETLIVSGCLQLNNLPRNL 1119

Query: 607  GSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES------FPRTFLLGLSAM 660
            GSL+ L  + A  +AI+Q P S+ L   L+ L    CK L        F    L G S+ 
Sbjct: 1120 GSLQRLAQLHADGTAITQPPDSIVLLRNLQVLIYPGCKILAPTSLGSLFSFWLLHGNSSN 1179

Query: 661  GL----------------LHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
            G+                L ISD  + E  IP  I  L SL+ L LS NNF S+PA I +
Sbjct: 1180 GIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNFLSIPAGISE 1239

Query: 703  MSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
            ++ L+ + L     L  +PELP  ++ +   +C  L
Sbjct: 1240 LTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTAL 1275



 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 183/612 (29%), Positives = 271/612 (44%), Gaps = 105/612 (17%)

Query: 458  CQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIECL 514
            C+ L  FPS +       +NFS C  L +FP I G +     LYL  +AIEE+PSSI  L
Sbjct: 944  CKKLICFPSIIDMKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHL 1003

Query: 515  TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTP 574
            T L +LDL+ CK LK +STS CKL+SL  L L GC  LE FPE++E M++LK +  D TP
Sbjct: 1004 TGLVLLDLKWCKNLKSLSTSICKLKSLENLSLSGCSKLESFPEVMENMDNLKELLLDGTP 1063

Query: 575  ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
            I  LPSS E L GL +L +  C  L +L + + +L                         
Sbjct: 1064 IEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCNL-----------------------TS 1100

Query: 635  LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFE 694
            L +L  S C  L + PR  L  L  +  LH    A+ + P  I  L +L++L   G    
Sbjct: 1101 LETLIVSGCLQLNNLPRN-LGSLQRLAQLHADGTAITQPPDSIVLLRNLQVLIYPGCKIL 1159

Query: 695  SLPAIIKQMSQLRFIHLEDFNMLQ-SLPELPLCLKY---LHLIDCKMLQSLPVLPFC--- 747
            + P  +  +     +H    N +   LP      +    L + DCK+++       C   
Sbjct: 1160 A-PTSLGSLFSFWLLHGNSSNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLI 1218

Query: 748  -LESLDLTGCNMLR---SLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQS 803
             L+ LDL+  N L     + EL   L+ L L  C  L  +PELP  ++ +   NC  L  
Sbjct: 1219 SLKKLDLSRNNFLSIPAGISELT-NLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTALLP 1277

Query: 804  LPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADS 863
                +  LQ L                            F F NC K     ++      
Sbjct: 1278 GSSSVNTLQGLQ---------------------------FLFYNCSKPVEDQSSDDKRTE 1310

Query: 864  LLRIRHMAIASLRLGYEMAIN----EKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
            L    H+ ++S      +  +    +KL E     IV PG+ IP+W  +Q+ GSSI IQL
Sbjct: 1311 LQIFPHIYVSSTASDSSVTTSPVMMQKLLENIAFSIVFPGTGIPEWIWHQNVGSSIKIQL 1370

Query: 920  PPHSSCRNLIGFAFCAVLDSK------KVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGY 973
            P      + +GFA C+VL+         ++SD F Y       DL+          D G+
Sbjct: 1371 PTDWHSDDFLGFALCSVLEHLPERIICHLNSDVFNY------GDLK----------DFGH 1414

Query: 974  NSRYIEDLIDSDRVILGFKPCLNVGF-----PDGYHHTIATFKFFAERKFYK-----IKR 1023
            +  +  +++ S+ V LG++PC  +       P+ ++H   +F+  A  +F       +K+
Sbjct: 1415 DFHWTGNIVGSEHVWLGYQPCSQLRLFQFNDPNEWNHIEISFE--AAHRFNSSASNVVKK 1472

Query: 1024 CGLCPVYANPSE 1035
            CG+C +YA   E
Sbjct: 1473 CGVCLIYAEDLE 1484


>gi|359495270|ref|XP_002276075.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1154

 Score =  366 bits (939), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 332/1055 (31%), Positives = 471/1055 (44%), Gaps = 182/1055 (17%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
             SD   +VGIWGMGGIGKTTLA+AI+ + + +FE  CF  +V G      GL  LQ++ L
Sbjct: 206  GSDDFLMVGIWGMGGIGKTTLARAIYRKITCQFEACCFFENV-GEDLAKEGLIGLQQKFL 264

Query: 63   STTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            +  L E       N+   T  K R+   K+LIVLD+VN+   LK L+G  D FG+GSRI+
Sbjct: 265  AQLLEE----PNLNMKALTSIKGRLHSKKVLIVLDNVNDPIILKCLVGNYDWFGRGSRII 320

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            +TTRDKR+L          Y      ++EA E    ++ K     +D    S+ V+ Y +
Sbjct: 321  ITTRDKRLL--ISHGVLNYYEAQRFNYDEASEFLTPYSLKHKIPCDDFMEVSKEVIGYAQ 378

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            G PL LEVLGS L    K  W    + L+++  +    I ++LK+S++ L  + K+I LD
Sbjct: 379  GLPLALEVLGSFLFSMTKEEWR---NQLDKLKSTPNMKIQEVLKVSYDGLDDKEKNILLD 435

Query: 241  IACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVR 296
            IACFF+GEDKD+V  ILD         +  LIDKSLV+IS  N + MHD++QEMGR+IVR
Sbjct: 436  IACFFKGEDKDYVMEILDGCGFFSLSGIRALIDKSLVTISWSNEIMMHDLIQEMGREIVR 495

Query: 297  QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLR 355
            Q+S +EPGKRSRLW  ++I+ VLK N  T+ IEGIFL+LS ++  +    +A   M+ LR
Sbjct: 496  QQSLEEPGKRSRLWFHEDINGVLKKNTATEKIEGIFLNLSHLEEMLYFTTQALAGMNRLR 555

Query: 356  LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
            L K Y  K   I +  +      +   KV       +    LR L++  Y L++LP++F 
Sbjct: 556  LLKVYNSK--NISR--NFKDTSNMENCKVNFSKDFKFCYHDLRCLYFYGYSLKSLPNDFN 611

Query: 416  PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
            PKNLVEL++  S+++Q W+G            K L+ L F                    
Sbjct: 612  PKNLVELSMPYSRIKQLWKG-----------IKVLANLKF-------------------- 640

Query: 476  INFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF 535
            ++ S+   LIE P   G                     +T+L+ L L GC  L+++ +S 
Sbjct: 641  MDLSHSKYLIETPNFRG---------------------VTNLKRLVLEGCVSLRKVHSSL 679

Query: 536  CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
              L++L+ L L  C  L+                        LPSS  +L  LE   +  
Sbjct: 680  GDLKNLIFLNLKNCQMLK-----------------------SLPSSTCDLKSLETFILSG 716

Query: 596  CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
            CSK    P+N GSLE L  + A   AI  LPSS +    L+ L    CKG  S   T  L
Sbjct: 717  CSKFKEFPENFGSLEMLKELYADEIAIGVLPSSFSFLRNLQILSFKGCKGPSS---TLWL 773

Query: 656  GLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN 715
                  L   S  ++  I Q ++ L SL  L LS  N    P +           L    
Sbjct: 774  ------LPRRSSNSIGSILQPLSGLRSLIRLNLSNCNLSDEPNLSSLGFLSSLEEL---- 823

Query: 716  MLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLE 775
                         YL   D     +LP     L +L L G                  LE
Sbjct: 824  -------------YLGGND---FVTLPSTISQLSNLTLLG------------------LE 849

Query: 776  DCNMLRSLPELPLCLQLLTVRNCNRL-----QSLPEILLCLQELDASVLEKLSKHSPDLQ 830
            +C  L+ LPELP  +  +   NC  L     Q L  +L   Q      +  + K  PD  
Sbjct: 850  NCKRLQVLPELPSSIYYICAENCTSLKDVSYQVLKSLLPTGQHQKRKFMVPVVK--PD-- 905

Query: 831  WAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSEL 890
                   +A    E +N                 +RI H A +  R+   + +      L
Sbjct: 906  -------TALAVLEASN---------------PGIRIPHRA-SYQRIDPVVKLGIATVAL 942

Query: 891  RGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYF 950
            +     +PGS IPDW   QSSGS +  +LPP+    N +GFAF  V         C    
Sbjct: 943  KA---FIPGSRIPDWIRYQSSGSEVKAELPPNWFNSNFLGFAFSFVTCGH---FSCLFML 996

Query: 951  YVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATF 1010
                 FD   +  S +  + +     +   L ++D V L + P   +       H   +F
Sbjct: 997  KADVLFDWTSRDDSSSVDIIIVEMISFKRRL-ETDHVCLCYVPLPQLRNCSQVTHIKVSF 1055

Query: 1011 KFFAERKFYKIKRCGLCPVYANPSETKDNTFTINF 1045
               +     +IKRCG+  VY+N     +N   I F
Sbjct: 1056 MAVSREGEIEIKRCGVGVVYSNEDGNHNNPPMIRF 1090


>gi|317106744|dbj|BAJ53239.1| JHS03A10.2 [Jatropha curcas]
          Length = 947

 Score =  365 bits (937), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 270/760 (35%), Positives = 410/760 (53%), Gaps = 81/760 (10%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S   + VGIWGMGG GKTTLA+A +D+ S++FE S F+SD R   + +  L  L+  + +
Sbjct: 203 SSAARTVGIWGMGGSGKTTLARATYDRISYQFERSYFLSDFRKQGKNS--LFQLRDSLFT 260

Query: 64  TTLSEK-LEVAGPNI--PHFTKERVRRMKLLIVLDDVNEVGQLKRLIG-ELDQFGQGSRI 119
             L+EK L++   ++    + ++R+RR K+L+V+DDV+   QL +L+  E   FG  S I
Sbjct: 261 FILNEKDLKMRNLDLCLTDYIQDRIRRTKVLLVVDDVDSSAQLNQLLATEYSLFGSRSVI 320

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           +VT+R+++VL+        IY +  L   EA   F   AFK+ +   D    S+ V++YT
Sbjct: 321 LVTSRNRQVLKNVVD---VIYPMMELNEHEALRLFSLNAFKQAYPSSDHMEKSKRVIAYT 377

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           KGNPL L+VLGS L  + + +W   L  L  I + EIH++   L++S++ L    + IFL
Sbjct: 378 KGNPLALKVLGSLLFDRSEEYWCSALKRLENIPKPEIHNV---LRVSYDVLDSEEQRIFL 434

Query: 240 DIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGN-FLNMHDILQEMGRQIV 295
           D+ACFF G++ D + +ILD   S V   +  LID+ L+++S +  L +HD+LQEMGR+IV
Sbjct: 435 DVACFFTGKNLDDIITILDGYFSSVYLTIKTLIDRCLITVSWDKRLEVHDLLQEMGRKIV 494

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
             ES + P  RSRLW+P++I  +L  NKGT+AIEGI LDLSK + I L   AF  M NLR
Sbjct: 495 NDESIR-PENRSRLWNPEDIRHILLENKGTEAIEGICLDLSKAREICLRRDAFAGMHNLR 553

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQ-LPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
             KFY  K            +      K+Q    GL +LP  LRYLHW   P++TLP+ F
Sbjct: 554 YLKFYESK------------DIAHGGGKMQPYDGGLRFLPTALRYLHWYGCPVKTLPAYF 601

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             +NLV L +  S+V++ W G        +Q    L  +     + L   P     +   
Sbjct: 602 GAENLVVLEMPESRVKKLWTG--------VQYLVNLKQIDLSWSEYLIKIPDLSKAINIE 653

Query: 475 TINFSYCVNLIEFPQISGKVTRL-YLGQSA---IEEVPSSIECLTDLEVLDLRGCKRLKR 530
            IN   C +L+E    +  + +L +L  S    +  +PSSI     +  +DL  C ++KR
Sbjct: 654 RINLQGCTSLVELHSSTQHLKKLEFLALSCCVNVRSIPSSIGSKV-IRCVDLSYCLKVKR 712

Query: 531 ----ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLP 586
               +S  F K+     L L G  NL  FP+I                 TE+ S      
Sbjct: 713 CPEILSWKFLKV-----LRLEGMSNLVKFPDI---------------AATEISS------ 746

Query: 587 GLEVLFVEDCSKLDNLPDNI---GSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
           G + L + +C KL +LP +I    SL+YLY  L+  S +   P  +   N++  +D + C
Sbjct: 747 GCDELSMVNCEKLLSLPSSICKWKSLKYLY--LSNCSKLESFPEILEPMNLV-EIDMNKC 803

Query: 644 KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQ 702
           K L+  P + +  L  +  L++   A+ EIP  I +L+ L +L LS   N E LP+ I +
Sbjct: 804 KNLKRLPNS-IYNLKYLESLYLKGTAIEEIPSSIEHLTCLTVLDLSDCKNLERLPSGIDK 862

Query: 703 MSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
           + QL+ ++L     L+SLP+LP  L +L +  CK+L+++P
Sbjct: 863 LCQLQRMYLHSCESLRSLPDLPQSLLHLDVCSCKLLETIP 902


>gi|37781226|gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]
          Length = 1136

 Score =  365 bits (937), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 302/955 (31%), Positives = 464/955 (48%), Gaps = 150/955 (15%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
             S  V  +GI GM G+GKTTLA+ I+D    +F+G+CF+ +VR  S   G LE LQ+ +L
Sbjct: 212  GSGGVHFLGILGMSGVGKTTLARVIYDNIRSQFQGACFLHEVRDRSAKQG-LERLQEILL 270

Query: 63   STTLS-EKLEV----AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            S  L  +KL +     G N+    K+R++  K+L+VLDDV+ + QL  L GE + FG GS
Sbjct: 271  SEILVVKKLRINDSFEGANM---QKQRLQYKKVLLVLDDVDHIDQLNALAGEREWFGDGS 327

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI++TT+DK +L K+  E +KIYR+  L   E+ + F   AFK+N   ++    S  V+ 
Sbjct: 328  RIIITTKDKHLLVKY--ETEKIYRMKTLNNYESLQLFKQHAFKKNRPTKEFEDLSAQVIK 385

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
            +T G PL L+VLGS L  +    W   +  L +I E+EI      L+ SF  L    + I
Sbjct: 386  HTDGLPLALKVLGSFLYGRGLDEWISEVERLKQIPENEI---LKKLEQSFTGLHNTEQKI 442

Query: 238  FLDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
            FLDIACFF G+ KD V  IL+         + +L++K L++I    + +H ++Q+MG  I
Sbjct: 443  FLDIACFFSGKKKDSVTRILESFHFCPVIGIKVLMEKCLITILQGRITIHQLIQDMGWHI 502

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            VR+E+  +P   SR+W  ++I  VL+ N GTD  EG+ L L+  + +N   +AF  M+ L
Sbjct: 503  VRREATDDPRMCSRMWKREDICPVLERNLGTDKNEGMSLHLTNEEEVNFGGKAFMQMTRL 562

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            R  KF                          +  G ++LP +LR+L W  YP ++LP++F
Sbjct: 563  RFLKF----------------------RNAYVCQGPEFLPDELRWLDWHGYPSKSLPNSF 600

Query: 415  KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
            K   LV L L+ S++ Q W+  K      +   KY+                        
Sbjct: 601  KGDQLVGLKLKKSRIIQLWKTSK-----DLGKLKYM------------------------ 631

Query: 475  TINFSYCVNLIEFP--QISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
              N S+   LI  P   ++  + RL L + +++ E+  SIE L  L +L+L+ C+ LK +
Sbjct: 632  --NLSHSQKLIRTPDFSVTPNLERLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTL 689

Query: 532  STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
                 +L  L  L+L GC  L  FPEI EKM  L  +Y   T ++ELP+S ENL G+ V+
Sbjct: 690  PKRI-RLEKLEILVLTGCSKLRTFPEIEEKMNCLAELYLGATSLSELPASVENLSGVGVI 748

Query: 592  FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
             +  C  L++LP +I  L+                        L++LD S C  L++ P 
Sbjct: 749  NLSYCKHLESLPSSIFRLK-----------------------CLKTLDVSGCSKLKNLPD 785

Query: 652  TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF-IH 710
               L +     LH +  A++ IP  ++ L +L+ L LSG N  S         Q    ++
Sbjct: 786  DLGLLVGLE-ELHCTHTAIQTIPSSMSLLKNLKHLSLSGCNALSSQVSSSSHGQKSMGVN 844

Query: 711  LEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC-- 768
             ++ + L SL  + L L   ++ D  +L +L  L   LE L L G N   ++P   +   
Sbjct: 845  FQNLSGLCSL--IMLDLSDCNISDGGILNNLGFLS-SLEILILNG-NNFSNIPAASISRF 900

Query: 769  --LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHS 826
              L+ L L  C  L SLPELP  ++ +    C  L S+               ++L+K+ 
Sbjct: 901  TRLKRLKLHGCGRLESLPELPPSIKGIFANECTSLMSI---------------DQLTKY- 944

Query: 827  PDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEK 886
            P L  A            F NC +L     +  + DSLL+     + +L +     +   
Sbjct: 945  PMLSDAT-----------FRNCRQLVKNKQHTSMVDSLLK---QMLEALYMNVRFCL--- 987

Query: 887  LSELRGSLIVLPGSEIPDWFSNQSSGS-SICIQLPPHSSCRNLIGFAFCAVLDSK 940
                      +PG EIP+WF+ +S G+ S+ + LP +       GF  C +LD K
Sbjct: 988  ---------YVPGMEIPEWFTYKSWGTQSMSVALPTNWFTPTFRGFTVCVILDKK 1033


>gi|37781278|gb|AAP44391.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1121

 Score =  365 bits (936), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 301/959 (31%), Positives = 460/959 (47%), Gaps = 157/959 (16%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
             S  V+ +GI GM G+GKTTLA+ I+D    +FEG+CF+ +VR  S   G LEHLQ+ +L
Sbjct: 212  GSGGVRFLGILGMSGVGKTTLARVIYDNIQSQFEGACFLHEVRDRSAKQG-LEHLQEILL 270

Query: 63   STTLS-EKLEV----AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            S  L  +KL +     G N+    K+R++  K+L+VLDDV+ + QL  L GE + FG GS
Sbjct: 271  SEILVVKKLRINDSFEGANM---QKQRLQYKKVLLVLDDVDHIDQLNALAGEREWFGDGS 327

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI++TT+DK +L K+  E +KIYR+  L+  E+ + F   AFK+NH  ++    S  V+ 
Sbjct: 328  RIIITTKDKHLLVKY--ETEKIYRMGTLDKYESLQLFKQHAFKKNHSTKEFEDLSAQVIE 385

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
            +T G PL L+VLGS L  +    W   +  L +I ++EI      L+ SF  L    + I
Sbjct: 386  HTGGLPLALKVLGSFLYGRGLDEWISEVERLKQIPQNEI---LKKLEPSFTGLNNIEQKI 442

Query: 238  FLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
            FLDIACFF G+ KD V  IL+    S    + +L++K L++I    + +H ++QEMG  I
Sbjct: 443  FLDIACFFSGKKKDSVTRILESFHFSPVIGIKVLMEKCLITILKGRITIHQLIQEMGWHI 502

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            VR+E+   P   SRLW  ++I  VL+ N  TD IEG+ L L+  + +N   +A   M++L
Sbjct: 503  VRREASYNPRICSRLWKREDICPVLEQNLCTDKIEGMSLHLTNEEEVNFGGKALMQMTSL 562

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            R  KF     Y+                      G ++LP +LR+L W  YP + LP++F
Sbjct: 563  RFLKFRNAYVYQ----------------------GPEFLPDELRWLDWHGYPSKNLPNSF 600

Query: 415  KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
            K   LV L L+ S++ Q W+  K      +   KY+                        
Sbjct: 601  KGDQLVSLKLKKSRIIQLWKTSK-----DLGKLKYM------------------------ 631

Query: 475  TINFSYCVNLIEFP--QISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
              N S+   LI  P   ++  + RL L + +++ E+  SI  L  L +L+L+ C+ LK I
Sbjct: 632  --NLSHSQKLIRMPDFSVTPNLERLVLEECTSLVEINFSIGDLGKLVLLNLKNCRNLKTI 689

Query: 532  STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
                 +L  L  L+L GC  L  FPEI EKM  L  +Y   T ++ELP+S EN  G+ V+
Sbjct: 690  PKRI-RLEKLEVLVLSGCSKLRTFPEIEEKMNRLAELYLGATSLSELPASVENFSGVGVI 748

Query: 592  FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
             +  C  L++LP +I  L+                        L++LD S C  L++ P 
Sbjct: 749  NLSYCKHLESLPSSIFRLK-----------------------CLKTLDVSGCSKLKNLPD 785

Query: 652  TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
               L L  +  LH +  A++ IP  ++ L +L+ L LSG N  S         Q      
Sbjct: 786  DLGL-LVGIEKLHCTHTAIQTIPSSMSLLKNLKHLSLSGCNALSSQVSSSSHGQKSM--- 841

Query: 712  EDFNMLQSLPELPLCLKYLHLIDCKM-----LQSLPVLPFCLESLDLTGCNMLRSLPELP 766
               N  Q+L  L   +K L L DC +     L +L +LP  L+ L L G N   ++P   
Sbjct: 842  -GINFFQNLSGLCSLIK-LDLSDCNISDGGILSNLGLLP-SLKVLILDG-NNFSNIPAAS 897

Query: 767  LC----LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKL 822
            +     L+ L L  C  L  LP+LP  ++ +       L    ++       +  +L ++
Sbjct: 898  ISRLTRLKCLALHGCTSLEILPKLPPSIKGIYANESTSLMGFDQLT------EFPMLSEV 951

Query: 823  SKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMA 882
            S                        C +L     +  +AD LL+     + +L + +   
Sbjct: 952  S---------------------LAKCHQLVKNKLHTSMADLLLK---EMLEALYMNFRFC 987

Query: 883  INEKLSELRGSLIVLPGSEIPDWFSNQSSGS-SICIQLPPHSSCRNLIGFAFCAVLDSK 940
            +             +PG EIP+WF+ ++ G+ SI + LP +       GF  C VLD +
Sbjct: 988  L------------YVPGMEIPEWFTYKNWGTESISVALPTNWFTPTFRGFTVCVVLDKR 1034


>gi|225465768|ref|XP_002266923.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1179

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 327/1056 (30%), Positives = 501/1056 (47%), Gaps = 169/1056 (16%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
            KTTLAKA+++Q  H+F+G+ F+S+   +          +  +L        ++ G +IP 
Sbjct: 221  KTTLAKAVYNQIVHQFDGASFLSNFSSH----------EMNLLQLQKQLLRDILGEDIPR 270

Query: 79   --------HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLE 130
                    H  ++ +   K+L+VLDDV+  GQL+ L+     FG GSRI+VT+R K +L 
Sbjct: 271  ITDISKGAHVIRDMLWSKKVLVVLDDVDGTGQLEFLVIN-RAFGPGSRIIVTSRHKYLLA 329

Query: 131  KFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLG 190
             +  +   +Y V  L  +EA + F   AF  N   +     SR +V Y KG P+ LEVLG
Sbjct: 330  GYGLD--ALYEVKELNCKEAIQLFSLHAFHMNSPQKGFMNLSRWIVDYCKGLPIALEVLG 387

Query: 191  SSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDK 250
            S L  K+K  W  VL  L +    +I ++   L   F  L    + IFLD+ACFF+GED 
Sbjct: 388  SHLFGKKKFEWESVLQRLEKRPNKQIQNV---LMRGFQGLDGCHREIFLDVACFFKGEDL 444

Query: 251  DFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRS 307
            DFV  IL+         + +L D SL+SI  N L MHD++Q+ G +IVR++   EPGK S
Sbjct: 445  DFVERILEACNFYSKLGIKVLTDNSLISILDNKLLMHDLIQKSGWEIVREQYHTEPGKWS 504

Query: 308  RLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEI 367
            RLWDP+++  VL  N GT  IEGIFL++     I+L   AF  M+ LRL + Y      +
Sbjct: 505  RLWDPEDVYHVLTTNTGTKRIEGIFLNMFVSNEIHLTSDAFKKMTRLRLLRVY----QNV 560

Query: 368  EKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCS 427
            E    +S       + V LP+   +   +LRYLHWD + L +LPSNF    LVEL+L+ S
Sbjct: 561  ENNSIVS-------NTVHLPHDFKFPSHELRYLHWDGWTLESLPSNFDGWKLVELSLKHS 613

Query: 428  KVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEF 487
             ++  W+  K C+P        L  ++    Q L          CP  ++F+  V L+  
Sbjct: 614  SLKHLWKKRK-CLPK-------LEVINLGNSQHLME--------CP-NLSFAPRVELL-- 654

Query: 488  PQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL 547
                     +  G +++ EV  S+  L  L +L+++ CK+L     S   L SL  L L 
Sbjct: 655  ---------ILDGCTSLPEVHPSVTKLKRLTILNMKNCKKLHYF-PSITGLESLKVLNLS 704

Query: 548  GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
            GC  L+ FPEI+E ME L+++  D T + ELP S  ++ GL++L +  C  L +LP++I 
Sbjct: 705  GCSKLDKFPEIMEVMECLQKLLLDGTSLKELPPSIVHVKGLQLLNLRKCKNLRSLPNSIC 764

Query: 608  SLEYL-YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHIS 666
            SL  L   I++  S +S+LP  +                       FL+ L A G     
Sbjct: 765  SLRSLETLIVSGCSKLSKLPEDLG-------------------RLQFLMKLQADGT---- 801

Query: 667  DYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC 726
              A+ + P  + +L +L+ L   G    +  + I  +   R +H E+             
Sbjct: 802  --AITQPPLSLFHLRNLKELSFRGCKGSTSNSWISSL-LFRLLHREN------------- 845

Query: 727  LKYLHLIDCKMLQSLPVLP--FCLESLDLTGCNMLR-----SLPELPLCLQYLNLEDCNM 779
                   D   LQ LP L   + L+ LDL+GCN+       +L  L   L+ LNL   N+
Sbjct: 846  ------SDGTGLQ-LPYLSGLYSLKYLDLSGCNLTDRSINDNLGHLSF-LEELNLSRNNL 897

Query: 780  LRSLPELPLC--LQLLTVRNCNRLQSLPEILLCLQELDAS---VLEKLSKHSPDLQWAPE 834
            +    E+     L++L+V  C  LQ + ++   ++ LDA     LE LS  SP    +P+
Sbjct: 898  VTVPAEVNRLSHLRVLSVNQCKSLQEISKLPPSIKLLDAGDCISLESLSVLSPQ---SPQ 954

Query: 835  SLKSAA----ICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSEL 890
             L S++    + F+  NC  L       IL              LR  +       L E+
Sbjct: 955  YLSSSSCLRPVTFKLPNCFALAQDNGATILE------------KLRQNF-------LPEI 995

Query: 891  RGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYF 950
              S IVLPGS IP+WF + S GSS+ I+LPP+   ++ +GFA C+V  S + D       
Sbjct: 996  EYS-IVLPGSTIPEWFQHPSIGSSVTIELPPNWHNKDFLGFALCSVF-SLEEDEIIQGSG 1053

Query: 951  YVSFQFDLEIKTLSETKHVDLGYNSRYIED-LIDSDRVILGFKPCLNVGFP-----DGYH 1004
             V   F+       E  ++    +  +  D +I++D + L ++P   +  P     + + 
Sbjct: 1054 LVCCNFEFR-----EGPYLSSSISWTHSGDRVIETDHIWLVYQPGAKLMIPKSSSLNKFR 1108

Query: 1005 HTIATFKFFAERKFYKIKRCGLCPVYANPSETKDNT 1040
               A F        + +K CG+  +YA   +    T
Sbjct: 1109 KITAYFSLSGAS--HVVKNCGIHLIYARDKKVNYQT 1142


>gi|356560337|ref|XP_003548449.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1289

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 278/802 (34%), Positives = 405/802 (50%), Gaps = 129/802 (16%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S + V+ +G+WGMGGIGKTT+A+ +++    +F  SCF+ ++R  S+T  GL H+QK++L
Sbjct: 209 SLNDVRFIGLWGMGGIGKTTIARFVYEAIKGDFNVSCFLENIREVSKT-NGLVHIQKELL 267

Query: 63  ---STTLSEKLEVA-GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
              +   S+   +  G NI       +   K+L+VLDDV+E+ QL+ L G+ + FG GSR
Sbjct: 268 FHLNVRSSDFYNLHDGKNI---IANSLSNKKILLVLDDVSELSQLENLAGKQEWFGSGSR 324

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRDK +L K  G      +  GL   EA + FC  AFK++   E+     + VV Y
Sbjct: 325 VIITTRDKHLL-KTHGVHLTC-KAKGLAQNEALKLFCLKAFKQDQPKEEYLNLCKEVVEY 382

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
            +G PL LEVLGS L  +    W   L  +     S+I D    LKIS++ L P  + +F
Sbjct: 383 ARGLPLALEVLGSHLYGRTVEVWHSALEQIRSFPHSKIQDT---LKISYDSLQPPYQKMF 439

Query: 239 LDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGRQI 294
           LDIACFF+G D D V +IL +        +DILI++ LV++     L MHD+LQEMGR I
Sbjct: 440 LDIACFFKGMDIDEVKNILKNCGYHPEIGIDILIERCLVTLDRMKKLGMHDLLQEMGRNI 499

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR----AFTN 350
           V QES  +PGKRSRLW  K+I  VL  NKGTD I+GI L+L  ++  + + R    AF+ 
Sbjct: 500 VFQESPNDPGKRSRLWSQKDIDYVLTKNKGTDEIQGIVLNL--VQPCDYEGRWSTEAFSK 557

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
            S L+L                      L    +QLP GL+ LP  L+ LHW   PL+TL
Sbjct: 558 TSQLKL----------------------LMLCDMQLPRGLNCLPSSLKVLHWRGCPLKTL 595

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
           P N K   +V+L L  S++EQ W G K      ++  K                      
Sbjct: 596 PLNNKLDEVVDLKLPHSRIEQLWRGTKL-----LEKLK---------------------- 628

Query: 471 VCPVTINFSYCVNLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKR 527
               +IN S+  NL + P   G   +  L L G +++ EV  S+     L +++L+ CKR
Sbjct: 629 ----SINLSFSKNLKQSPDFGGAPNLESLVLEGCTSLTEVHPSLVRHKKLAMMNLKDCKR 684

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
           LK + +   ++ SL  L L GC   ++ PE  E MEHL  +  + T I +LPSS   L G
Sbjct: 685 LKTLPSKM-EMSSLKDLNLSGCSEFKYLPEFGESMEHLSVLSLEGTAIAKLPSSLGCLVG 743

Query: 588 LEVLF------------------------VEDCSKLDNLPDNIGSLEYLYYILAAASAIS 623
           L  L+                        V  CSKL  LP+ +  ++ L  + A+ +AI 
Sbjct: 744 LAHLYLKNCKNLVCLPDTFHNLNSLIVLNVSGCSKLGCLPEGLKEIKSLEELDASGTAIQ 803

Query: 624 QLPSSVALSNMLRSLDSSHCK------------------GLESFPRTFLLGLSAMGL--- 662
           +LPSSV     L+S+  + CK                  G +  P  F L  S + L   
Sbjct: 804 ELPSSVFYLENLKSISFAGCKKPVSNSVSGFLLPFQWVFGNQQTPTAFRLPPSKLNLPSL 863

Query: 663 ----LHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
               L   + +    P    +LSSL+ L L+GNNF +LP+ I  +++L  + L     L+
Sbjct: 864 MRINLSYCNLSEESFPDGFRHLSSLQFLDLTGNNFVTLPSCISNLTKLEILLLNLCKKLK 923

Query: 719 SLPELPLCLKYLHLIDCKMLQS 740
            LPELP  +K+L   +C  L++
Sbjct: 924 RLPELPSRMKHLDASNCTSLET 945



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 4/120 (3%)

Query: 475  TINFSYCVNLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
            +I+ S+  NL + P   G   +  L L G +++ EV  S+       +++L  CKRLK +
Sbjct: 1170 SIDLSFSKNLKQSPDFDGAPNLESLVLEGCTSLTEVHPSLVRHKKPVMMNLEDCKRLKTL 1229

Query: 532  STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
             +   ++ SL  L L GC   E+ PE  E ME +  +  + TPIT+LPSS   L GL  L
Sbjct: 1230 PSKM-EMSSLKYLSLSGCSEFEYLPEFGESMEQMSVLNLEETPITKLPSSLGCLVGLAHL 1288



 Score = 41.2 bits (95), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 3/134 (2%)

Query: 507  VPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL-EHFPEILEKMEHL 565
            V   I+ L  L+ +DL   K LK+ S  F    +L +L+L GC +L E  P ++   + +
Sbjct: 1158 VNQDIKLLEKLKSIDLSFSKNLKQ-SPDFDGAPNLESLVLEGCTSLTEVHPSLVRHKKPV 1216

Query: 566  KRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQL 625
                 D   +  LPS  E +  L+ L +  CS+ + LP+   S+E +  +    + I++L
Sbjct: 1217 MMNLEDCKRLKTLPSKME-MSSLKYLSLSGCSEFEYLPEFGESMEQMSVLNLEETPITKL 1275

Query: 626  PSSVALSNMLRSLD 639
            PSS+     L  LD
Sbjct: 1276 PSSLGCLVGLAHLD 1289


>gi|359496030|ref|XP_002277205.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1195

 Score =  363 bits (932), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 288/864 (33%), Positives = 427/864 (49%), Gaps = 144/864 (16%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V+IVGIWGM GIGKTTLA+AI++Q SH+FE S F+ +V  + +  G +  L++++LS  +
Sbjct: 344  VRIVGIWGMDGIGKTTLARAIYNQVSHQFESSAFLLNVEEDFKKEGSIG-LEQKLLSLLV 402

Query: 67   SEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
             ++ L + G       K R+R  K+ I+LDDV +   L  L    D FG GSRI++TT+D
Sbjct: 403  DDRNLNIRGHTS---IKRRLRSKKVFIMLDDVKDQEILGYLTENQDSFGHGSRIIITTKD 459

Query: 126  KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
            K +L          Y +  L  EEA E     + K     +DL   SR V +Y +G PL 
Sbjct: 460  KNLLT---SHLVNYYEIRKLSHEEAMEVLRRHSSKHKLPEDDLMELSRRVTTYAQGLPLA 516

Query: 186  LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF 245
            L++L S L   +K  W   L  L         DI  +L+IS+++L  +VK++F+DIACFF
Sbjct: 517  LKILSSFLFGMKKHEWKSYLDKLKGTPNP---DINKVLRISYDELDNKVKNMFMDIACFF 573

Query: 246  EGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKE 302
            +G+DKD+V  IL+      +  +  L+DKS ++IS N L MHD++Q MG ++VRQ S  E
Sbjct: 574  KGKDKDYVMEILEGCGFFPACGIRTLLDKSFITISNNKLQMHDLIQHMGMEVVRQNSPNE 633

Query: 303  PGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVP 362
            PGK SRLW  +++S V+K N GT+ +EGIFLDLS ++ I+     FT ++ LRL K Y  
Sbjct: 634  PGKWSRLWSHEDVSHVVKKNTGTEEVEGIFLDLSNLQEIHFTSEGFTRINKLRLLKVYKS 693

Query: 363  KFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
               +  K  +   EE     KV   + L +    LRYL+W  Y L++LP NF P+ L+E 
Sbjct: 694  HISKDSKC-TFKKEE----CKVYFSHNLKFHSNDLRYLYWYGYSLKSLPDNFNPERLLEF 748

Query: 423  NLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
            N+  S ++Q W+G            K L  L F                  + ++ S C 
Sbjct: 749  NMPYSHIKQLWKG-----------IKVLEKLKF------------------MELSHSQC- 778

Query: 483  NLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLV 542
             L+E P +S                       ++LE L L GC  L  I  S   L  L+
Sbjct: 779  -LVEIPDLSRA---------------------SNLERLVLEGCIHLCAIHPSLGVLNKLI 816

Query: 543  TLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNL 602
             L L  C+NL HFP  +E                        L  L++  +  CSKL+  
Sbjct: 817  FLSLRDCINLRHFPNSIE------------------------LKSLQIFILSGCSKLEKF 852

Query: 603  PDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGL 662
            P+  G +E+L  +      I +LPSS+  +  L  LD ++CK L S P + +  L ++  
Sbjct: 853  PEIRGYMEHLSELFLDGIGIEELPSSIEYAIGLVVLDLTNCKELRSLPNS-ICNLESLKT 911

Query: 663  LHISDYAVRE-IPQEIAYLSSLEILYLSGNNFESLPAII-KQMSQLRFIHLEDFNMLQSL 720
            L +SD +  E +PQ    L  L  LY   N   + P ++ K  + L F+ L   + L+SL
Sbjct: 912  LLLSDCSKLESLPQNFGKLKQLRKLY---NQTFAFPLLLWKSSNSLDFL-LPPLSTLRSL 967

Query: 721  PELPLCLKYLHLIDCKMLQS----LPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLED 776
             +L L        DC ++      +  L   L+ L+LTG N + SLP             
Sbjct: 968  QDLNLS-------DCNIVDGPQLSVLSLMLSLKKLNLTGNNFV-SLPS------------ 1007

Query: 777  CNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDAS---VLEKLSKHSPDLQWAP 833
                 S+ +LP  L +L + NC RLQ++PE+L  ++ ++A     LE +S      QW  
Sbjct: 1008 -----SISQLPQ-LTVLKLLNCRRLQAIPELLSSIEVINAHNCIPLETISN-----QWHH 1056

Query: 834  ESLKSAAICFEFTNCLKLNGKANN 857
              L+ A     FTNC K+    +N
Sbjct: 1057 TWLRHAI----FTNCFKMKEYQSN 1076



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 76/186 (40%), Gaps = 33/186 (17%)

Query: 896  VLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQ 955
            V PG  IPDWF + S G  + +++ P+    N +GFA  AV+  K               
Sbjct: 28   VFPGRTIPDWFMHHSKGHEVDVEVAPNWYDSNFLGFAVSAVIAPK--------------- 72

Query: 956  FDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGY----HHTIATFK 1011
             D  IK          G+ S Y +  +DS    L FK      F + +      T  TF 
Sbjct: 73   -DGSIKK---------GW-STYCD--LDSHDPDLEFKYSRECSFTNAHTSQLEDTTITFS 119

Query: 1012 FFAERKFYKIKRCGLCPVYANPSETKDNTFTINFATEVWKLDDLPSASGTLDVEELELSP 1071
            F   RK   +KRCG+CPVY    +  +  F +  + +    +  PS S   D+ E  L  
Sbjct: 120  FSTNRKSCIVKRCGVCPVYME-GDGSNEGFGVQTSNDNHIDNGNPSGSVLDDLHEWGLED 178

Query: 1072 KRICRA 1077
              I R+
Sbjct: 179  TTIRRS 184


>gi|37781280|gb|AAP44392.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score =  363 bits (931), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 280/853 (32%), Positives = 419/853 (49%), Gaps = 160/853 (18%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S  V  +GI GM G+GKTTLA+ I+D    +F+G+CF+ +VR  S   G LE LQ+ +L
Sbjct: 212 GSGGVHFLGILGMSGVGKTTLARVIYDNIRSQFQGACFLHEVRDRSAKQG-LERLQEILL 270

Query: 63  STTLS-EKLEV----AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           S  L  +KL +     G N+    K+R++  K+L+VLDDV+ + QL  L GE + FG GS
Sbjct: 271 SEILVVKKLRINNSFEGANM---QKQRLQYKKVLLVLDDVDHIDQLNALAGEREWFGDGS 327

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI++TT+DK +L K+  E +KIYR+  L   E+ + F   AFK+N   ++    S  V+ 
Sbjct: 328 RIIITTKDKHLLVKY--ETEKIYRMKTLNNYESLQLFKQHAFKKNRPTKEFEDLSAQVIK 385

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           +T G PL L+VLGS L  +    W   +  L +I E+EI      L+ SF  L    + I
Sbjct: 386 HTDGLPLALKVLGSFLYGRGLDEWISEVERLKQIPENEI---LKKLEQSFTGLHNTEQKI 442

Query: 238 FLDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FLDIACFF G+ KD V  IL+         + +L++K L++I    + +H ++Q+MG  I
Sbjct: 443 FLDIACFFSGKKKDSVTRILESFHFCPVIGIKVLMEKCLITILQGRITIHQLIQDMGWHI 502

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VR+E+  +P   SRLW  ++I  VL+ N GTD  EG+ L L+  + +N   +AF  M+ L
Sbjct: 503 VRREATDDPRMCSRLWKREDICPVLERNLGTDKNEGMSLHLTNEEEVNFGGKAFMQMTRL 562

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           R  KF                          +  G ++LP +LR+L W  YP ++LP++F
Sbjct: 563 RFLKF----------------------RNAYVCQGPEFLPDELRWLDWHGYPSKSLPNSF 600

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
           K   LV L L+ S++ Q W+  K      +   KY+                        
Sbjct: 601 KGDQLVGLKLKKSRIIQLWKTSK-----DLGKLKYM------------------------ 631

Query: 475 TINFSYCVNLIEFP--QISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
             N S+   LI  P   ++  + RL L + +++ E+  SIE L  L +L+L+ C+ LK +
Sbjct: 632 --NLSHSQKLIRTPDFSVTPNLERLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTL 689

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG---- 587
                +L  L  L+L GC  L  FPEI EKM  L  +Y   T ++ LP+S ENL G    
Sbjct: 690 PKRI-RLEKLEILVLTGCSKLRTFPEIEEKMNCLAELYLGATSLSGLPASVENLSGVGVI 748

Query: 588 --------------------LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPS 627
                               L+ L V  CSKL NLPD++G L  L  +    +AI  +PS
Sbjct: 749 NLSYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEKLHCTHTAIHTIPS 808

Query: 628 SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGL-------------LHISDYAVRE-- 672
           S++L   L+ L    C  L S   +   G  +MG+             L +SD  + +  
Sbjct: 809 SMSLLKNLKRLSLRGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIRLDLSDCDISDGG 868

Query: 673 IPQEIAYLSSLEILYLSGNNFESLPAI-IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
           I + + +LSSL++L L GNNF ++PA  I ++++L+                        
Sbjct: 869 ILRNLGFLSSLKVLLLDGNNFSNIPAASISRLTRLK------------------------ 904

Query: 732 LIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPEL---PL 788
                             SL L GC  L SLPELP  +  +   DC  L S+ +L   P+
Sbjct: 905 ------------------SLALRGCGRLESLPELPPSITGIYAHDCTSLMSIDQLTKYPM 946

Query: 789 CLQLLTVRNCNRL 801
            L  ++ RNC++L
Sbjct: 947 -LSDVSFRNCHQL 958


>gi|224114311|ref|XP_002332395.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832718|gb|EEE71195.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1144

 Score =  363 bits (931), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 296/948 (31%), Positives = 452/948 (47%), Gaps = 162/948 (17%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNIP 78
           KTT+A+ ++D+    FEGSCF+++VR       G   LQK++LS  L E+ + +   +  
Sbjct: 70  KTTVARVLYDRIRRRFEGSCFLANVREAFAEKDGPRSLQKKLLSDILMERDINICDSSTG 129

Query: 79  -HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
               K++++R+K+L+VLDDVN+  QL+ L  E   FG GSRI++T+RD  VL     ++ 
Sbjct: 130 IEMIKQKLQRIKILVVLDDVNDRKQLEYLAKEPGWFGPGSRIIITSRDTNVL--IGNDDT 187

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           KIY    L  ++A   F   AFK +   E     S+ VV Y  G PL  EV+GS L  + 
Sbjct: 188 KIYEAEKLNDDDALMLFSQKAFKNDQPAEGFVELSKQVVDYANGLPLAHEVIGSFLYERS 247

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W   ++ +N I + +I    D+L++SF+ L    K IFLDIACF +G  KD +  IL
Sbjct: 248 IPEWRGAINRMNEIPDGKI---IDVLRVSFDGLHESDKKIFLDIACFLKGFKKDRITRIL 304

Query: 258 DDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
           +         + +LI++SL+S+S + + MHD+LQ MG++IVR ES +EPG+RSRLW  ++
Sbjct: 305 ESRGFHAGIGIPVLIERSLISVSRDQVWMHDLLQIMGKEIVRCESPEEPGRRSRLWTYED 364

Query: 315 ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
           +   L  N G + IE IFLD+  IK    +  AF+ MS LRL K                
Sbjct: 365 VCLALMDNTGKEKIEAIFLDMPGIKDAQWNMEAFSKMSKLRLLKI--------------- 409

Query: 375 TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
                  + VQL  G + L  KLR+L W +YP ++LP+  +   LVEL++  S ++Q W 
Sbjct: 410 -------NNVQLSEGPEDLSNKLRFLEWYSYPSKSLPAGLQVDELVELHMANSNLDQLWY 462

Query: 435 GEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG-- 492
           G K             SAL+ K                   IN SY +NL   P ++G  
Sbjct: 463 GCK-------------SALNLK------------------IINLSYSLNLSRTPDLTGIP 491

Query: 493 KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
            +  L L G +++ EV  S+    +L+ ++L  CK + RI  S  ++ SL    L GCL 
Sbjct: 492 NLESLILEGCTSLSEVHPSLGSHKNLQYVNLVNCKSI-RILPSNLEMESLKVFTLDGCLK 550

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
           LE FP+++  M  L  +  D T IT+L SS  +L GL +L +  C  L ++P +I  L+ 
Sbjct: 551 LEKFPDVVRNMNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKS 610

Query: 612 LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR 671
           L                       + LD S C  L++ P+  L  + ++    +S  ++R
Sbjct: 611 L-----------------------KKLDLSGCSELKNIPKN-LGKVESLEEFDVSGTSIR 646

Query: 672 EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP-LC-LKY 729
           + P  I  L SL++L     +F+    I    +  R            LP L  LC L+ 
Sbjct: 647 QPPASIFLLKSLKVL-----SFDGCKRIAVNPTDHR------------LPSLSGLCSLEV 689

Query: 730 LHLIDCKMLQ-SLP--VLPFCLESLDLTGCNMLRSLPELP---LCLQYLNLEDCNMLRSL 783
           L L  C + + +LP  +             N   SLP+       L+ L LEDC+ML SL
Sbjct: 690 LDLCACNLREGALPEDIGFLSSLRSLDLSQNNFVSLPQSINQLFELERLVLEDCSMLESL 749

Query: 784 PELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC- 842
           PE+P  +Q + +  C  L+ +P+                          P  L S+ I  
Sbjct: 750 PEVPSKVQTVNLNGCISLKEIPD--------------------------PIKLSSSKISE 783

Query: 843 FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEI 902
           F   NC +L        +  ++L      +++ R G+               IV+PG+EI
Sbjct: 784 FLCLNCWELYEHNGQDSMGLTMLERYLKGLSNPRPGFG--------------IVVPGNEI 829

Query: 903 PDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYF 950
           P WF+++S GSSI +Q+P  S     +GF  C    +       F +F
Sbjct: 830 PGWFNHRSKGSSISVQVPSWS-----MGFVACVAFSANGESPSLFCHF 872


>gi|359493351|ref|XP_002277841.2| PREDICTED: uncharacterized protein LOC100251634 [Vitis vinifera]
          Length = 2816

 Score =  362 bits (930), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 259/721 (35%), Positives = 381/721 (52%), Gaps = 86/721 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V+++GI GM GIGKT LA++I++QFS +FEG CF+++V GN E  G  ++ +K++LS
Sbjct: 204 STDVRMIGICGMSGIGKTALARSIYEQFSDKFEGCCFLTNV-GNVEREG-TDYWKKELLS 261

Query: 64  TTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
           + L +  ++V   +I    K R+   K+LIV+D+V+    +K LIG+ D FG  SRI++T
Sbjct: 262 SVLKDNDIDVTITSI----KTRLGSKKVLIVVDNVSHQLTMKTLIGKHDWFGPQSRIIIT 317

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TR+KR L         +Y V  L+ ++A E F + AF+++H  E     S   ++Y +G 
Sbjct: 318 TRNKRFLSGMDA----VYEVQKLQDDKAIELFNHCAFRKDHPAESFKRFSLRFIAYAQGL 373

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL LEVLGSSL  K + +W   L +L +  ++EIH +   L+ SF++L    K IFLDIA
Sbjct: 374 PLALEVLGSSLYKKDQDYWKSKLDELEKTLDNEIHGV---LQKSFDELNDNEKDIFLDIA 430

Query: 243 CFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
           CFF+  +KD +  IL+         ++ LID+ L++IS   L MHD+LQ+MG +IV Q S
Sbjct: 431 CFFKCSNKDHIMKILESCNLFPGSGIENLIDRFLITISCEKLEMHDLLQKMGWKIVTQTS 490

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
            KEPGKRSRLW   +I  VL+ N GT  ++GIFL+L  +K I+    AF  M+ LRL + 
Sbjct: 491 -KEPGKRSRLWMQDDICHVLEKNTGTKEVKGIFLNLFGLKEIHFTTEAFARMNRLRLLEV 549

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
           Y     +     S S + +    KV+  +   +   +LRYL+W  YPL+TLPS+FKPKNL
Sbjct: 550 YESNLSDDSDSESTSRKRKC---KVRFSDDFKFHSDELRYLYWHEYPLQTLPSHFKPKNL 606

Query: 420 VELNLRCSKVEQPWEGEKAC---------------------------------------V 440
           V L +  S++ +PW+G + C                                       +
Sbjct: 607 VCLCMPYSQITEPWKGSQVCENLKFLDLSNSKFLMETPDFSRITNLEELVLDGCTNLCHL 666

Query: 441 PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV---TRL 497
            SS+   + L+ LS   C  LR FP+    V   T++ S C NL +FP IS  +   ++L
Sbjct: 667 HSSLGRLRKLAFLSVSNCIKLRDFPAIYKLVSLQTLDLSGCSNLQKFPDISQHMPCLSKL 726

Query: 498 YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPE 557
           YL  +AI E+P+SI   ++L +LDL  CK LK + +S  KL  L  L L GC  L  F +
Sbjct: 727 YLDGTAITEIPASIAYASELVLLDLTNCKELKFLPSSIPKLTLLRILTLSGCSKLGKFQQ 786

Query: 558 ILEKMEHL--KRI------------YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLP 603
               ++ L  KR+                     LP  F+ L  L  L + DC +L  LP
Sbjct: 787 NSGNLDRLSGKRLSHLGILSSLKSLNLSGNRFIHLPCIFKGLSNLSRLDLHDCRRLQTLP 846

Query: 604 DNIGSLEYLYYILAAASAISQ---LPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAM 660
                L     IL A++  S    LP SV +S   R     +C  L  +P T    + +M
Sbjct: 847 ----LLPPSVRILNASNCTSLESILPESVFMS--FRGCLFGNCLRLMKYPSTMEPHIRSM 900

Query: 661 G 661
            
Sbjct: 901 A 901



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 114/184 (61%), Gaps = 9/184 (4%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNIP 78
            KTTLA+AI+++ S +FEGSCF+++V   ++   G ++L+ Q+LS  L +K ++V   ++ 
Sbjct: 1615 KTTLARAIYEKISDKFEGSCFLANVGDLAKE--GEDYLKDQLLSRVLRDKNIDVTITSL- 1671

Query: 79   HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
               K R+   K+LIVLD+VN    LK L GE + FG  SRI++TTRDK++L    G  K 
Sbjct: 1672 ---KARLHSKKVLIVLDNVNHQSILKNLAGESNWFGPQSRIIITTRDKQLL-TMHG-VKD 1726

Query: 139  IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            I+ V  L+  +A E F ++AF+      D+      V++Y +G PL LEVLGSS C K K
Sbjct: 1727 IHEVQKLQDNKAIELFNHYAFRNEPPSSDVMELIHHVIAYAQGLPLALEVLGSSFCNKSK 1786

Query: 199  SHWG 202
              WG
Sbjct: 1787 DEWG 1790



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 142/558 (25%), Positives = 210/558 (37%), Gaps = 116/558 (20%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S I E     +   +L+ LDL   K L   +  F ++ +L  L+L GC NL H       
Sbjct: 614  SQITEPWKGSQVCENLKFLDLSNSKFLME-TPDFSRITNLEELVLDGCTNLCH------- 665

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASA 621
                            L SS   L  L  L V +C KL + P                 A
Sbjct: 666  ----------------LHSSLGRLRKLAFLSVSNCIKLRDFP-----------------A 692

Query: 622  ISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLS 681
            I +L S       L++LD S C  L+ FP      +  +  L++   A+ EIP  IAY S
Sbjct: 693  IYKLVS-------LQTLDLSGCSNLQKFP-DISQHMPCLSKLYLDGTAITEIPASIAYAS 744

Query: 682  SLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
             L +L L+     + LP+ I +++ LR + L   + L    +    L  L     K L  
Sbjct: 745  ELVLLDLTNCKELKFLPSSIPKLTLLRILTLSGCSKLGKFQQNSGNLDRL---SGKRLSH 801

Query: 741  LPVLPFCLESLDLTGCNMLRSLPELPLC-------LQYLNLEDCNMLRSLPELPLCLQLL 793
            L +L            N    LP    C       L  L+L DC  L++LP LP  +++L
Sbjct: 802  LGILS--SLKSLNLSGNRFIHLP----CIFKGLSNLSRLDLHDCRRLQTLPLLPPSVRIL 855

Query: 794  TVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNG 853
               NC  L+S+                            PES+  +     F NCL+L  
Sbjct: 856  NASNCTSLESI---------------------------LPESVFMSFRGCLFGNCLRLM- 887

Query: 854  KANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLI--VLPGSEIPDWFSNQSS 911
                K  +     IR MA    +  +    +E+     G     V+PGS IPDWF ++  
Sbjct: 888  ----KYPSTMEPHIRSMATHVDQERWRSTYDEEYPSFAGIPFSNVVPGSGIPDWFRDRRE 943

Query: 912  GSSICIQLPPH------SSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSE 965
            G  I I++  +       S  N +G A  AV+  +  D    R +Y       +    SE
Sbjct: 944  GHDINIEVHQNWYSSTPGSNNNFLGLALSAVVAPQ--DGFLGRGWYPYCDLYTQNDPKSE 1001

Query: 966  TKHVDLGYNSRYIE---DLIDSDRVILGFKPCLNVGFPDGYHHTIATFKF-FAERKFYKI 1021
            + H+    + R  +     I+SD + L + P     F        +  KF F       +
Sbjct: 1002 SSHICSFTDGRTYQLEHTPIESDHLWLAYVP----SFFSFSCEKWSCIKFSFGTSGECVV 1057

Query: 1022 KRCGLCPVYANPSETKDN 1039
            K CG+CPVY   +    N
Sbjct: 1058 KSCGVCPVYIKDTTNDHN 1075



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 117/275 (42%), Gaps = 65/275 (23%)

Query: 693  FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY------LHLIDCKMLQSLP---- 742
             E  P I + M  LR + L+      ++ ELP  + Y      L L +C+ L SLP    
Sbjct: 1840 LEKSPVISQHMPCLRRLCLDG----TAITELPSSIAYATQLVLLDLKNCRKLLSLPSSIS 1895

Query: 743  -----VLPFCLESLDLTGCNM----LRSLPEL--PLC-LQYLNLEDCNMLRSLPELPLCL 790
                         LDL  C +    L +LP+    LC L+ L L++C+ L SLP LP  +
Sbjct: 1896 KLTLLETLSLSGCLDLGKCQVNSGNLDALPQTLDRLCSLRRLELQNCSGLPSLPALPSSV 1955

Query: 791  QLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFE---FTN 847
            +L+   NC  L+ +                              S +S  +CF    F N
Sbjct: 1956 ELINASNCKSLEDI------------------------------SPQSVFLCFGGSIFGN 1985

Query: 848  CLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSL-IVLPGSEIPDWF 906
            C KL+ K  + +  D    ++ MA  + +  +     ++   ++     V PGS IPDWF
Sbjct: 1986 CFKLS-KYPSTMERD----LQRMAAHANQERWWSTFEQQNPNVQVPFSTVFPGSRIPDWF 2040

Query: 907  SNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKK 941
             ++S G  I I++ P+    N +GFA  AV+  +K
Sbjct: 2041 KHRSQGHEINIKVSPNWYTSNFLGFALSAVIAPEK 2075



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 43/179 (24%)

Query: 481  CVNLIEFPQISGKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
            C  L + P IS  +    RL L  +AI E+PSSI   T L +LDL+ C++L  + +S  K
Sbjct: 1837 CSKLEKSPVISQHMPCLRRLCLDGTAITELPSSIAYATQLVLLDLKNCRKLLSLPSSISK 1896

Query: 538  LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS 597
            L  L TL L GCL+             L +   +   +  LP + + L  L  L +++CS
Sbjct: 1897 LTLLETLSLSGCLD-------------LGKCQVNSGNLDALPQTLDRLCSLRRLELQNCS 1943

Query: 598  KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF-PRTFLL 655
             L +LP                     LPSSV L      +++S+CK LE   P++  L
Sbjct: 1944 GLPSLP--------------------ALPSSVEL------INASNCKSLEDISPQSVFL 1976



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 13/146 (8%)

Query: 596  CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
            CSKL+  P     +  L  +    +AI++LPSS+A +  L  LD  +C+ L S P +   
Sbjct: 1837 CSKLEKSPVISQHMPCLRRLCLDGTAITELPSSIAYATQLVLLDLKNCRKLLSLPSS--- 1893

Query: 656  GLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN 715
                     IS   + E       L  L    ++  N ++LP  + ++  LR + L++ +
Sbjct: 1894 ---------ISKLTLLETLSLSGCL-DLGKCQVNSGNLDALPQTLDRLCSLRRLELQNCS 1943

Query: 716  MLQSLPELPLCLKYLHLIDCKMLQSL 741
             L SLP LP  ++ ++  +CK L+ +
Sbjct: 1944 GLPSLPALPSSVELINASNCKSLEDI 1969


>gi|399920191|gb|AFP55538.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1320

 Score =  362 bits (930), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 270/793 (34%), Positives = 400/793 (50%), Gaps = 113/793 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           ++ V+ +GIWGMGG+GKTTLA+ ++++ SH+FE   F+++VR  S T G L +LQKQ+LS
Sbjct: 214 TNDVRFIGIWGMGGLGKTTLARLVYEKISHQFEVCVFLANVREVSATHG-LVYLQKQILS 272

Query: 64  TTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             L E+           T  K       +L+VLDDV++  QL+ L GE D FG  SRI++
Sbjct: 273 HILKEENAQVWNVYSGITMIKRCFCNKAVLLVLDDVDQSEQLEHLAGEKDWFGLRSRIII 332

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRD+ VL     E  K Y + GLE +EA + F   AF+++   ED    S+SVV    G
Sbjct: 333 TTRDRHVLVTHDIE--KPYELKGLEEDEALQLFSWKAFRKHEPEEDYAEQSKSVVRIAGG 390

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L+ LGS LC +    W   L  L    E     ++D+LK+S++ L    K IFLDI
Sbjct: 391 LPLALKTLGSFLCKRSPDAWESALAKLQNTPEK---TVFDLLKVSYDGLDEMEKKIFLDI 447

Query: 242 ACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQ 297
           ACF    +   +  +L   D      +D+L++KSL++IS N  + MHD+++EMG +IVRQ
Sbjct: 448 ACFSSQCEAKLIIELLYSYDVCTRIAIDVLVEKSLLTISSNTEIGMHDLIREMGCEIVRQ 507

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
           +S KEPG RSRLW   +I  V   N GT+  EGIFL L K++  + +P AF+ M NL+L 
Sbjct: 508 QSPKEPGGRSRLWLRNDIFHVFTKNTGTEVTEGIFLHLHKLEEADWNPEAFSKMCNLKLL 567

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
             +                       ++L  G  +LP  LR L W  YP ++LP  F+P 
Sbjct: 568 YIH----------------------NLRLSLGPKFLPDALRILKWSWYPSKSLPPGFQPH 605

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSI----------------------------QNFKY 449
            L EL+L CS+++  W G K  VP  +                            +N+++
Sbjct: 606 ELAELSLPCSEIDHLWNGIKFIVPRGLGVGPNQGVNLGEVDLGEVRKLVREERDEKNWRW 665

Query: 450 LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG--KVTRLYL-GQSAIEE 506
           + ++  +G +    +   L      +I+ SY +NL   P  +G   + +L L G + + +
Sbjct: 666 VVSVLEEGRKRWDKYLGKLK-----SIDLSYSINLTRTPDFTGIQNLEKLVLEGCTNLVK 720

Query: 507 VPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLK 566
           +  SI  L  L++ + R CK +K + +    +  L T  + GC  L+  PE + +M+ L 
Sbjct: 721 IHPSIALLKRLKIWNFRNCKSIKSLPSE-VNMEFLETFDVSGCSKLKMIPEFVGQMKRLS 779

Query: 567 RIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLP 626
           +     T + +LPSSFE+L                        E L  +  +   I + P
Sbjct: 780 KFCLGGTAVEKLPSSFEHLS-----------------------ESLVELDLSGIVIREQP 816

Query: 627 SSVALSNMLRSLDSSHCKGLESFPR----------TFLLGLSAMGLLHISDYAV--REIP 674
            S  L   L++L  S C GL  FPR            L   S +  L++SD  +   EIP
Sbjct: 817 YSFFLK--LQNLRVSVC-GL--FPRKSPHPLIPVLASLKHFSYLTELNLSDCNLCEGEIP 871

Query: 675 QEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI- 733
            +I  LSSL+ L L GNNF SLPA I+ +S+LR I +E+   LQ LPELP     + +  
Sbjct: 872 NDIGSLSSLKYLELGGNNFVSLPASIRLLSKLRHIDVENCTRLQQLPELPPASDRILVTT 931

Query: 734 -DCKMLQSLPVLP 745
            +C  LQ  P  P
Sbjct: 932 DNCTSLQVFPDPP 944


>gi|147802475|emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]
          Length = 1244

 Score =  361 bits (927), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 282/779 (36%), Positives = 386/779 (49%), Gaps = 140/779 (17%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL---SEKLEVAGPN 76
           KTT+AK +++  S +FEG  F++++R  S+  G L  LQKQ+L   L   S+++      
Sbjct: 225 KTTIAKVVYNLISSQFEGISFLANIREVSKNCGLLP-LQKQLLGDILMGWSQRISNLBEG 283

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           I +   +R+   K+LI+LDDV+++ QL+ L G +D FG GSRIV+TTRDK +L      E
Sbjct: 284 I-NVLMDRLHSKKVLIILDDVDDLNQLESLAGNVDWFGIGSRIVITTRDKHLLNVHGVSE 342

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
             IY    LE EEA + F  +AFK     +D    S +VV Y KG PL L+VLGS L  K
Sbjct: 343 --IYEAKELEPEEALQLFSQYAFKRKSPXKDYMNLSDNVVHYAKGLPLALKVLGSFLFSK 400

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
               W   LH L +   +++ D+   L+ISF+ L    K IFLD+ACFF+G++ DFV  I
Sbjct: 401 TILEWESELHKLKKELNTKVQDV---LRISFDGLDFTQKEIFLDLACFFKGQEYDFVIKI 457

Query: 257 LDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           LD         + +L D+ L+ +  N L MHD++Q+MG +IVRQE  K+PGK SRLWD +
Sbjct: 458 LDGCGFHAKSGIRVLSDRCLIDLLDNRLWMHDLIQQMGWEIVRQECPKDPGKWSRLWDYE 517

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
            I  VLK N   D               NL+    +N  +L     ++P F  +  L  +
Sbjct: 518 HIYSVLKKNTVLD---------------NLNTIELSNSQHL----IHLPNFSSMPNLERL 558

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLR-CSKVEQP 432
             E   S+ +V                          PS      L+ LNL+ C K+   
Sbjct: 559 VLEGCTSFLEVD-------------------------PSIEVLNKLIFLNLKNCKKLRS- 592

Query: 433 WEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
                   P SI+  + L  LS  GC  L++F                       P+I G
Sbjct: 593 -------FPRSIK-LECLKYLSLSGCSDLKNF-----------------------PEIQG 621

Query: 493 KVTRL---YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
            +  L   YL  +AI E+P SI  LT L +LDL  CKRLK + +S CKL+SL TLIL  C
Sbjct: 622 NMQHLSELYLDGTAISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSAC 681

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTPITE------------------------LPSSFENL 585
             LE FPEI+E MEHLK++  D T + +                        LP S  NL
Sbjct: 682 SKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNL 741

Query: 586 PGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKG 645
             LE L V  CSKL  LP+N+GSL+ L  + A  + + Q PSS+ L   L  L    CKG
Sbjct: 742 KSLETLIVSGCSKLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEILSFGGCKG 801

Query: 646 LES-----------FPRT----------FLLGLSAMGLLHISDYAVRE--IPQEIAYLSS 682
           L S            PR            L GL ++  L ISD  + E  +P +I  LSS
Sbjct: 802 LASNSWSSLFSFWLLPRKSSDTIGLQLPSLSGLCSLRELDISDCNLMEGAVPFDICNLSS 861

Query: 683 LEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           LE L LS NNF SLPA I ++S+LRF+ L     L  +PELP  +  ++   C  L ++
Sbjct: 862 LETLNLSRNNFFSLPAGISKLSKLRFLSLNHCKSLLQIPELPSSIIEVNAQYCSSLNTI 920



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 201/607 (33%), Positives = 288/607 (47%), Gaps = 99/607 (16%)

Query: 440  VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV---TR 496
            V  SI+    L  L+ K C+ LRSFP ++   C   ++ S C +L  FP+I G +   + 
Sbjct: 569  VDPSIEVLNKLIFLNLKNCKKLRSFPRSIKLECLKYLSLSGCSDLKNFPEIQGNMQHLSE 628

Query: 497  LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
            LYL  +AI E+P SI  LT L +LDL  CKRLK + +S CKL+SL TLIL  C  LE FP
Sbjct: 629  LYLDGTAISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFP 688

Query: 557  EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL-YYI 615
            EI+E MEHLK++  D T + +L  S E+L GL  L + DC  L  LP +IG+L+ L   I
Sbjct: 689  EIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLI 748

Query: 616  LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
            ++  S + QLP          +L S  C          L+ L A G L      VR+ P 
Sbjct: 749  VSGCSKLQQLP---------ENLGSLQC----------LVKLQADGTL------VRQPPS 783

Query: 676  EIAYLSSLEILYLSG------NNFESLPA---IIKQMSQLRFIHLEDFNMLQSLPELPLC 726
             I  L +LEIL   G      N++ SL +   + ++ S    + L   + L SL EL + 
Sbjct: 784  SIVLLRNLEILSFGGCKGLASNSWSSLFSFWLLPRKSSDTIGLQLPSLSGLCSLRELDIS 843

Query: 727  LKYLHLIDCKMLQSLPVLPFC----LESLDLTGCNMLRSLP----ELPLCLQYLNLEDCN 778
                   DC +++       C    LE+L+L+  N   SLP    +L   L++L+L  C 
Sbjct: 844  -------DCNLMEGAVPFDICNLSSLETLNLSRNNFF-SLPAGISKLSK-LRFLSLNHCK 894

Query: 779  MLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKS 838
             L  +PELP  +  +  + C+ L ++         L  S    +  + P  +W       
Sbjct: 895  SLLQIPELPSSIIEVNAQYCSSLNTI---------LTPS---SVCNNQPVCRW------- 935

Query: 839  AAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELR---GSLI 895
              + F   NC  L+  A N    D       MAI S R+     + +KL       G  I
Sbjct: 936  --LVFTLPNCFNLD--AENPCSND-------MAIISPRMQIVTNMLQKLQNFLPDFGFSI 984

Query: 896  VLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSD-CFRYFYVSF 954
             LPGSEIPDW SNQ+ GS + I+LPPH    N +GFA C V   + +  + C        
Sbjct: 985  FLPGSEIPDWISNQNLGSEVTIELPPHWFESNFLGFAVCCVFAFEDIAPNGCSSQLLCQL 1044

Query: 955  QFD-LEIKTLSETKH-VDLGYNSRYIEDLIDSDRVILGFKP--CLNVGF---PDGYHHTI 1007
            Q D    + +    H +D   NS   ED + S  + L +KP   L + +   P+ + H  
Sbjct: 1045 QSDESHFRGIGHILHSIDCEGNS---EDRLKSHHMWLAYKPRGRLRISYGDCPNRWRHAK 1101

Query: 1008 ATFKFFA 1014
            A+F F +
Sbjct: 1102 ASFGFIS 1108


>gi|225448269|ref|XP_002270337.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1256

 Score =  361 bits (927), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 331/1047 (31%), Positives = 514/1047 (49%), Gaps = 162/1047 (15%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            SD V+IVGI+G+GGIGKTT+A+ I++  S EFE   F+ ++RG S T G L HLQ Q+L 
Sbjct: 212  SDAVRIVGIYGIGGIGKTTIARVIYNNLSSEFECMSFLENIRGVSNTRG-LPHLQNQLLG 270

Query: 64   TTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
              L  +       + H     K  +   ++ IVLDDV+ + QL+ L+      G+GSR++
Sbjct: 271  DILGGEGIQNINCVSHGAIMIKSILSSKRVFIVLDDVDNLVQLEYLLRNRGWLGKGSRVI 330

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            +TTR+K +L   +G +  +Y V+ L F EA+E F  +AFK+NH        S S VSY +
Sbjct: 331  ITTRNKHLL-NVQGVDD-LYEVDQLNFNEAYELFSLYAFKQNHPKSGFVNLSYSAVSYCQ 388

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
              PL L+VLGS L  K    W   L  L R+ E+EIH++   LK S++ L    K+IFLD
Sbjct: 389  HLPLALKVLGSLLFSKTIPQWESELLKLERVPEAEIHNV---LKRSYDGLDRTEKNIFLD 445

Query: 241  IACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
            IACFF+ ED+DFV  ILD         ++ LIDKSL+++S N + +HD++Q+MG +IVR+
Sbjct: 446  IACFFKDEDRDFVLRILDGCNFHAERGIENLIDKSLITLSYNQIRLHDLIQQMGWEIVRE 505

Query: 298  ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
                EP K SRLWDP +I R L   +G   +E I LDLSK+K +  +   F+ MS LRL 
Sbjct: 506  NFPNEPDKWSRLWDPHDIERALTTYEGIKGVETINLDLSKLKRVRFNSNVFSKMSRLRLL 565

Query: 358  K-----------FY--------VPKFYEIEKL---------------------------- 370
            K           FY          + Y++E++                            
Sbjct: 566  KVHSNVNLDHDLFYDSEELEEGYSEMYKLEEMLFNRNFVTVRLDKVHSDHDSEDIEEEEE 625

Query: 371  --PSMSTEEQLSYSKVQLP--NGLDYL---PKKLR-------------YLHWDTYPLRTL 410
                M++E+   Y +V +P   G D++     K+R             YL+WD YPL +L
Sbjct: 626  EEDIMASEDYHDY-EVAIPCMVGYDFVMETASKMRLGLDFEIPSYELRYLYWDGYPLDSL 684

Query: 411  PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSAL-SFKGCQSLRSFPSNLH 469
            PSNF  +NLVEL+L+CS ++Q W+G K      + +  Y + L       SL    SNL 
Sbjct: 685  PSNFDGENLVELHLKCSNIKQLWQGNKYLESLKVIDLSYSTKLIQMPEFSSL----SNLE 740

Query: 470  FVCPVTINFSYCVNLIEF-PQISG--KVTRLYLGQS-AIEEVPSSIECLTDLEVLDLRGC 525
             +         CV+LI+  P I G  K+T L L     I+ +PSSI  L  L++LDL  C
Sbjct: 741  RLI-----LKGCVSLIDIHPSIGGLKKLTTLNLKWCLKIKGLPSSISMLESLQLLDLSKC 795

Query: 526  KRL-----------------------KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM 562
                                      K + TS    RS   L   G  NLE F  I + M
Sbjct: 796  SSFCKFSEIQGNMRCLREPYLKETATKDLPTSIGNSRSFWDLYPCGRSNLEKFLVIQQNM 855

Query: 563  EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAI 622
              L+ +Y  +T I ELPSS + L  +E+L + +C K +   +N  +++ L  ++   +AI
Sbjct: 856  RSLRLLYLCKTAIRELPSSID-LESVEILDLSNCFKFEKFSENGANMKSLRQLVLTNTAI 914

Query: 623  SQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSS 682
             +LP+ +A    LR+LD S C   E FP      ++++  L +++ A++ +P  I YL S
Sbjct: 915  KELPTGIANWESLRTLDLSKCSKFEKFPE-IQGNMTSLKKLLLNNTAIKGLPDSIGYLKS 973

Query: 683  LEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLK---YLHLIDCKML 738
            LEIL +S  + FE+ P     M  L+ + L++   ++ LP+    L+   +L L +C   
Sbjct: 974  LEILNVSDCSKFENFPEKGGNMKSLKELSLKN-TAIKDLPDSIGDLESLWFLDLTNCSKF 1032

Query: 739  QSLPVLPFCLESLDLTGCN--MLRSLPELP---LCLQYLNLEDCNMLRSLPELP---LCL 790
            +  P     ++SL +   N   ++ LP+       L++L+L DC+     PE       L
Sbjct: 1033 EKFPEKGGNMKSLRVLYLNDTAIKDLPDSIGDLESLEFLDLSDCSKFEKFPEKGGNMKSL 1092

Query: 791  QLLTVRNCNRLQSLPEILLCLQEL------DASVLEKLSKHSPDLQWAPE-SLKSAAI-- 841
            + L+++N   ++ LP  +  L+ L      D S  EK  +   +++   +  LK+ AI  
Sbjct: 1093 KKLSLKNT-AIKDLPYSIRDLESLWFLDLSDCSKFEKFPEKGGNMKSLMDLRLKNTAIKD 1151

Query: 842  ------CFEFTNCLKLNGKAN--NKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGS 893
                    +F   L L G ++    ++++ L  ++ + I  L+              + +
Sbjct: 1152 LPNNISGLKFLETLNLGGCSDLWEGLISNQLCNLQKINIPELKC------------WKLN 1199

Query: 894  LIVLPGSEIPDWFSNQSSGSSICIQLP 920
             ++   S I +W      GS +  +LP
Sbjct: 1200 AVIPESSGILEWIRYHILGSEVTAKLP 1226


>gi|51477390|gb|AAU04763.1| MRGH8 [Cucumis melo]
          Length = 1058

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 259/783 (33%), Positives = 402/783 (51%), Gaps = 105/783 (13%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D ++ VGIWGMGGIGKTTLA+ I+   SH F+G  F+ +V+  +    G+  LQ+++L+ 
Sbjct: 244 DDIRFVGIWGMGGIGKTTLARIIYRSVSHLFDGCYFLDNVK-EALKKQGIASLQEKLLTG 302

Query: 65  TLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
            L ++ +++   +     K R+  +K LI+LDDV+ + QL++L G  D FG GSRI+VTT
Sbjct: 303 ALMKRNIDIPNADGATLIKRRISNIKALIILDDVDHLSQLQQLAGSSDWFGSGSRIIVTT 362

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           R++ +L    G EK+ Y+V GL  EEA + F   AF  N+  +D    S  VV Y+   P
Sbjct: 363 RNEHLLVS-HGIEKR-YKVEGLNVEEALQLFSQKAFGTNYPKKDYFDLSIQVVEYSGDLP 420

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L +EVLGSSL  K +  W   +  L  I + +   I +IL++S++ L    K IFLD+AC
Sbjct: 421 LAIEVLGSSLRDKSREVWKNAVEKLKEIRDKK---ILEILRVSYDLLDKSEKEIFLDLAC 477

Query: 244 FFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
           FF+ + K     +L          L+IL ++SL++     + MHD++QEMG+++VR+   
Sbjct: 478 FFKKKSKKQAIEVLQSFGFQAIIGLEILEERSLITTPHEKIQMHDLIQEMGQEVVRRMFP 537

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
             P KR+RLW  ++++  L H++G +AIEGI +D S+    +L+ + F+ M+NLR+ K  
Sbjct: 538 NNPEKRTRLWLREDVNLALSHDQGAEAIEGIVMDSSEEGESHLNAKVFSTMTNLRILKI- 596

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                                + V L   LDYL  +LR+L W  YP + LP NF PK+++
Sbjct: 597 ---------------------NNVSLCGELDYLSDQLRFLSWHGYPSKYLPPNFHPKSIL 635

Query: 421 ELNLRCSKVEQPWEGEK----------------------------------ACV-----P 441
           EL L  S +   W+G K                                   CV      
Sbjct: 636 ELELPNSFIHYLWKGSKRLDRLKTVNLSDSQFISKTPDFSGVPNLERLILSGCVRLTKLH 695

Query: 442 SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV---TRLY 498
            S+ + K L  L  K C++L++ P ++     + ++ S C +L  FP I G +   T L+
Sbjct: 696 QSLGSLKRLIQLDLKNCKALKAIPFSISLESLIVLSLSNCSSLKNFPNIVGNMKNLTELH 755

Query: 499 LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
           L  ++I+E+  SI  LT L +L+L  C  L  +  +   L  L TL L GC  L   PE 
Sbjct: 756 LDGTSIQELHPSIGHLTGLVLLNLENCTNLLELPNTIGSLICLKTLTLHGCSKLTRIPES 815

Query: 559 LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
           L  +  L+++    T I + P S + L  LE+L   DC  L         +  L+    +
Sbjct: 816 LGFIASLEKLDVTNTCINQAPLSLQLLTNLEIL---DCRGLSR-----KFIHSLFPSWNS 867

Query: 619 ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR--EIPQE 676
           +S  SQL            L  ++C  L SF         +M  L++SD +++  +IP  
Sbjct: 868 SSYSSQL-----------GLKFTYC--LSSF--------CSMKKLNLSDCSLKDGDIPDN 906

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCK 736
           +  L SLEIL LSGN+F  LP  ++ +  LR ++L +   LQ LP+LPL ++ +   DC 
Sbjct: 907 LQSLPSLEILDLSGNSFSFLPKSVEHLVNLRTLYLVNCKRLQELPKLPLSVRSVEARDCV 966

Query: 737 MLQ 739
            L+
Sbjct: 967 SLK 969


>gi|297804200|ref|XP_002869984.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315820|gb|EFH46243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1046

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 240/660 (36%), Positives = 341/660 (51%), Gaps = 76/660 (11%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           D+ + ++ +G+ GM GIGKTT+A +++ +   +F+G CF+ D+  N     GL HL +++
Sbjct: 208 DNKNCIRTIGVLGMTGIGKTTVADSVYKRNYRQFDGYCFLEDIE-NESKRHGLHHLHQKL 266

Query: 62  LSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
           L   L E  E          K+ +R  KL IVLD+V E  Q++ LIGE + + +GSRIV+
Sbjct: 267 LCKLLDE--ENVDIRAHGRLKDFLRNKKLFIVLDNVTEENQIEVLIGEQEMYRKGSRIVI 324

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVSYTK 180
           TTRDK++L+        IY V  L   EA E FC  AF +   P E+    S + V Y K
Sbjct: 325 TTRDKKLLQ---NNADAIYVVPRLNDREAMELFCLDAFSDKLYPTEEFLDLSNNFVYYAK 381

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G+PL L++LGS L  K +++W +    L  + + EI  +   LK+S+  L    KSIFLD
Sbjct: 382 GHPLALKLLGSGLRQKERTYWVEKWERLMVMPDKEIQKV---LKMSYEALDDEQKSIFLD 438

Query: 241 IACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
           IACFF  E  D V+SIL      V+  L DK LV+ S N L MHD++  MG++I  + S 
Sbjct: 439 IACFFRSEKADLVSSILKSDH--VMRELEDKCLVTKSYNRLEMHDLMHAMGKEIGYESSI 496

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
           K  GKRSRLW+ K+I  VL+   GT+ + GIF ++S ++ I L P  F  MSNL+  KF+
Sbjct: 497 KRAGKRSRLWNHKDIRNVLEQKTGTECVRGIFFNMSNVERIKLSPDVFMRMSNLKFLKFH 556

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                      S  ++   +  K+Q    LD+ P +L YLHW  YP   LPS F P+ LV
Sbjct: 557 ----------NSHCSQWCDNDHKIQFSKELDHFPDELVYLHWQGYPYEYLPSEFNPEELV 606

Query: 421 ELNLRCSKVEQPWEGEK----------------------------------ACVP----- 441
           +L+LR S ++Q WE +K                                   C       
Sbjct: 607 DLSLRYSYIKQLWEDDKKTENLRWVDLSQSKDLRSLSGLSKAKNLERLDLEGCTSLVLLG 666

Query: 442 SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ 501
           SSI+    L  L+ + C SL S P  ++     T+  S C NL EF  IS  +  LYL  
Sbjct: 667 SSIEKMNKLIYLNLRDCTSLESLPEGINLKSLKTLILSGCSNLQEFQIISDNIESLYLEG 726

Query: 502 SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
           SAIE+V   IE L +L +L+L+ C+RLK +     KL+SL  LIL GC  LE  P I E+
Sbjct: 727 SAIEQVVEHIESLRNLILLNLKNCRRLKYLPNDLYKLKSLQELILSGCSALESLPPIKEE 786

Query: 562 MEHLKRIYSDRTPITELP---------------SSFENLPGLEVLFVEDCSKLDNLPDNI 606
           ME L+ +  D T I + P               SS E+  GL  +    C  L+ + + +
Sbjct: 787 MECLEILLMDGTSIKQTPETICLSNLKMFSFCGSSIEDSTGLHYVDAHGCVSLEKVAEPV 846



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 185/442 (41%), Gaps = 75/442 (16%)

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSF--ENLPGLEVLFV------EDCSKLDNL- 602
           L+HFP+       L  ++    P   LPS F  E L  L + +       ED  K +NL 
Sbjct: 576 LDHFPD------ELVYLHWQGYPYEYLPSEFNPEELVDLSLRYSYIKQLWEDDKKTENLR 629

Query: 603 ------PDNIGSLEYLYYI-------LAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
                   ++ SL  L          L   +++  L SS+   N L  L+   C  LES 
Sbjct: 630 WVDLSQSKDLRSLSGLSKAKNLERLDLEGCTSLVLLGSSIEKMNKLIYLNLRDCTSLESL 689

Query: 650 PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
           P    + L ++  L +S  +  +  Q I+   ++E LYL G+  E +   I+ +  L  +
Sbjct: 690 PEG--INLKSLKTLILSGCSNLQEFQIIS--DNIESLYLEGSAIEQVVEHIESLRNLILL 745

Query: 710 HLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLP---ELP 766
           +L++   L+ LP            D   L+SL       + L L+GC+ L SLP   E  
Sbjct: 746 NLKNCRRLKYLPN-----------DLYKLKSL-------QELILSGCSALESLPPIKEEM 787

Query: 767 LCLQYLNLEDCNMLRSLPELPLCLQLLTVRN-CNRLQSLPEILLCLQELDASVLEKLSKH 825
            CL+ L L D   ++  PE  +CL  L + + C    S  E    L  +DA     L K 
Sbjct: 788 ECLEIL-LMDGTSIKQTPE-TICLSNLKMFSFCG---SSIEDSTGLHYVDAHGCVSLEKV 842

Query: 826 SPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINE 885
           +  +   P         F FTNC KLN      I+A + L+ + +A  SL+   +  + E
Sbjct: 843 AEPVT-LPLVTDRMHTTFIFTNCFKLNRAEQEAIVAQAQLKSQLLARTSLQHNNKGLVLE 901

Query: 886 KLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSD 945
            L       +  PGSEIP WFS+Q  GS I   L PH          +C + + ++  ++
Sbjct: 902 PLVA-----VCFPGSEIPSWFSHQRMGSLIETDLLPH----------WCNIFEWREKSNE 946

Query: 946 CFRYFYVSFQFDLEIKTLSETK 967
             R    S  F+  +   +E K
Sbjct: 947 GTRCHPTSASFEFYLTDETERK 968


>gi|297741031|emb|CBI31343.3| unnamed protein product [Vitis vinifera]
          Length = 1239

 Score =  360 bits (923), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 238/594 (40%), Positives = 344/594 (57%), Gaps = 63/594 (10%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+I+GIWGM GIGKTTLA AIF++F ++FEG  F  +V G      G+E LQ+++LS  L
Sbjct: 211 VRIIGIWGMSGIGKTTLAGAIFERFRNQFEGCVFFENV-GTELEREGIEGLQEKLLSKIL 269

Query: 67  SEK-LEVAG-PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
             K L + G P+I    K  +   K+LIVLD+V +   ++++  + D FG GSRI++TT 
Sbjct: 270 GLKNLSLTGRPSI----KAALGSKKVLIVLDNVKDQMIIEKIAKKRDWFGVGSRIIITTT 325

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           +K VL     E K+IY V   + +EA + F  +AFK++H  +D    S+S+++ T G PL
Sbjct: 326 NKNVLRTH--EVKEIYEVKKFDGDEAMKLFSRYAFKQDHPRKDFVELSKSIIACTHGLPL 383

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            +++LG  L  K K  W   L  LN+  +  I    + L++S+N+L    + +FLDIACF
Sbjct: 384 AIKLLGDLLFEKSKHEWESKLDKLNKDLKLGI----NCLQMSYNELNDDEQCLFLDIACF 439

Query: 245 FEGEDKDFVASILDDSES---DVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F+GED D+VA ILD+      D +  L+DKSL++ISGN L MHD+LQEMGR++V Q+S+ 
Sbjct: 440 FKGEDIDYVAKILDNHNRCPIDGIHALVDKSLITISGNKLQMHDLLQEMGREVVCQKSQ- 498

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIK-GINLDPRAFTNMSNLRLFKFY 360
           EPGKR+RLW  ++IS VLK+NKGT+ +EGI LDLS +K  +  +  AF  M+ L+L K Y
Sbjct: 499 EPGKRTRLWKHEDISLVLKNNKGTEEVEGISLDLSHVKEKLRFETPAFARMNKLKLLKVY 558

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                      +     +     V    G  +   +LRYLH   Y L++LP++F  +NLV
Sbjct: 559 -----------NSGGASKKGNCNVHFSQGFKFHYDELRYLHLHGYNLKSLPNDFNAENLV 607

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
            L++  S V+Q W+G K                   G + L+S            I+ S+
Sbjct: 608 HLSMPHSYVQQLWKGSK-------------------GMEKLKS------------IDLSH 636

Query: 481 CVNLIEFPQISGKVTRLYL---GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
              L E P  SG V    L   G  ++ ++ +SI  L  L++L+LR CK LK +S S C 
Sbjct: 637 STRLTETPNFSGVVNLEQLILQGCISLRKLHTSIGVLNKLKLLNLRDCKMLKSLSESICC 696

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
           L SL TL++ GC  L+ FPE L K+E LK +Y+D T +TE+PSS   L  LE  
Sbjct: 697 LSSLQTLVVSGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNLETF 750



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 135/543 (24%), Positives = 201/543 (37%), Gaps = 121/543 (22%)

Query: 562  MEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA-A 619
            ME LK I  S  T +TE P+ F  +  LE L ++ C  L  L  +IG L  L  +     
Sbjct: 626  MEKLKSIDLSHSTRLTETPN-FSGVVNLEQLILQGCISLRKLHTSIGVLNKLKLLNLRDC 684

Query: 620  SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
              +  L  S+   + L++L  S C  L+ FP   L  L  +  L+  + AV E+P  + +
Sbjct: 685  KMLKSLSESICCLSSLQTLVVSGCCKLKKFPEN-LGKLEMLKELYADETAVTEVPSSMGF 743

Query: 680  LSSLEILYLSGNNFESLPA----IIKQMSQLRFI--HLE-----------DFNMLQSLPE 722
            L +LE     G    S PA    +  +   + FI  H+            D N+L     
Sbjct: 744  LKNLETFSFQGRKGPS-PAPSSMLRTRSDSMGFILPHVSGLSSLLKLNLSDRNILDGARL 802

Query: 723  LPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRS 782
              L L     I      +   LP C+  L L G               +L  ++C  L++
Sbjct: 803  SDLGLLSSLKILILNGNNFDTLPGCISQLFLLG---------------WLESKNCQRLQA 847

Query: 783  LPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC 842
            LPELP  +  +   NC  L+++    L    L  + L++  + +  L+   E   SAA  
Sbjct: 848  LPELPSSIGYIGAHNCTSLEAVSNQSL-FSSLMIAKLKEHPRRTSQLEHDSEGQLSAA-- 904

Query: 843  FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEI 902
              FT                                                +V PGS I
Sbjct: 905  --FT------------------------------------------------VVAPGSGI 914

Query: 903  PDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLD------SKKVDSDCFR--YFYVSF 954
            PDW S QSSG  + ++LPP+      + FA C V        +  ++  C +   FY + 
Sbjct: 915  PDWISYQSSGREVTVKLPPNWFTTYFLAFASCVVTSPSVLPYADSINELCTKCTVFYSTS 974

Query: 955  QFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYH-HTIATFKFF 1013
                    +    H          E  ++SD V L +     V FP   + H +   KF 
Sbjct: 975  SCVSSSYDVFPRSHA---------EGRMESDHVWLRY-----VRFPISINCHEVTHIKFS 1020

Query: 1014 AERKF---YKIKRCGLCPVYANPSETKDNTFTINFAT-----EVWKLDDLPSASGTLDVE 1065
             E        IKRCG+  VY N  E  +N   I F +      +   D  PS SG  +V+
Sbjct: 1021 FEMILGTSSAIKRCGVGLVYGNDDENYNNPGMIQFNSIFSPPNLEIHDGEPSGSGCSNVD 1080

Query: 1066 ELE 1068
              E
Sbjct: 1081 GSE 1083


>gi|297734814|emb|CBI17048.3| unnamed protein product [Vitis vinifera]
          Length = 872

 Score =  359 bits (922), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 271/768 (35%), Positives = 384/768 (50%), Gaps = 120/768 (15%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           + V++VG++G+GGIGKTT+  A++++ S++FE    ++DVR  S    GL  LQ+Q+L+ 
Sbjct: 108 NDVRMVGVYGLGGIGKTTIINALYNRISNQFESVSLLTDVRKESTENSGLLKLQQQLLND 167

Query: 65  TLSEKLEVAGPNIPHFTKE---RVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
           TL    ++   ++    KE   ++   K+L+ LDDV+E+ QL+ LIG+ D FG GSRI++
Sbjct: 168 TLRTTRKIVLRDVHEGIKEIRDKLSSKKVLVFLDDVDELTQLEHLIGKHDWFGPGSRIII 227

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTR K +L   R E   +Y V  L F EA + FC +AFK++H  E     S  VV Y  G
Sbjct: 228 TTRKKDLLT--RHEVNDMYEVEKLYFHEALQLFCRYAFKQHHPKEGYGDLSHQVVQYADG 285

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L+VLGS L  KR   W   L  L ++   EI     +LKISF+ L    + IFLDI
Sbjct: 286 LPLALKVLGSLLFGKRLPDWKSELQKLEKVPNMEI---VKVLKISFDGLDYTQRMIFLDI 342

Query: 242 ACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQ 297
           ACFF G+D   V+ ILD SE +    ++ L+D+  ++IS  N ++MHD+L +MG+ IV Q
Sbjct: 343 ACFFRGDDVKRVSRILDASEFNAESGINALVDRCFITISKDNRIDMHDLLAQMGKGIVDQ 402

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
           E   EPG+RSRLW   +I RVLK N GT+ IEGI+L + K + I    +AF  M  LRL 
Sbjct: 403 ECPNEPGERSRLWRHIDIYRVLKRNTGTEKIEGIYLHVDKSEQIQFTSKAFERMHRLRLL 462

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
                                +S++ VQL     + P  L YL W+ Y L +LPSNF   
Sbjct: 463 --------------------SISHNHVQLSKDFVF-PYDLTYLRWNGYSLESLPSNFHAN 501

Query: 418 NLVELNLRCSKVEQPWEGEKACVPS----------------SIQNFKYLSALSFKGCQSL 461
           NLV L L  S ++  W+G   C+ +                +  N   L  L   GC SL
Sbjct: 502 NLVSLILGNSNIKLLWKG-NMCLRNLRRINLSDSQQLIELPNFSNVPNLEELILSGCVSL 560

Query: 462 RSFPSNLHFVCP-VTINFSYCVNLIEFPQISGKVTRLY---LGQSAIEEVPSSIECLTDL 517
            S P ++H     +T++ + C  L  FP+I   + +L    L ++AI+E+PSSIE L  L
Sbjct: 561 ESLPGDIHESKHLLTLHCTGCSKLASFPKIKSNIAKLEELCLDETAIKELPSSIELLEGL 620

Query: 518 EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
             L+L  CK L+ +  S C LR LV L L GC  L+  PE LE+M               
Sbjct: 621 RYLNLDNCKNLEGLPNSICNLRFLVVLSLEGCSKLDRLPEDLERM--------------- 665

Query: 578 LPSSFENLPGLEVLFVE--DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
                   P LEVL++    C        ++    YL          +  P  +   N L
Sbjct: 666 --------PCLEVLYLNSLSCQLPSLSGLSLLRELYL-------DQCNLTPGVIKSDNCL 710

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAM--GLLHISDYAVREIPQEIAYLSSLEILYLS---- 689
            +L            + F LG   +  G+ H            I +LSSLE+L LS    
Sbjct: 711 NAL------------KEFSLGNCILNGGVFHC-----------IFHLSSLEVLNLSRCSP 747

Query: 690 --GNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
             G     +   I Q+S LR + L     L  +PELP  L+   L+DC
Sbjct: 748 EEGGTLSDILVGISQLSNLRALDLSHCKKLSQIPELPSSLR---LLDC 792


>gi|147774169|emb|CAN63551.1| hypothetical protein VITISV_032106 [Vitis vinifera]
          Length = 924

 Score =  359 bits (921), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 229/586 (39%), Positives = 328/586 (55%), Gaps = 53/586 (9%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ V++VG++G+GGIGKTT+  A+++Q SH+FE    +++VR  S    GL  LQ+++L 
Sbjct: 214 SNDVRMVGVYGLGGIGKTTIINALYNQISHQFESVSLLTNVRKESTKNSGLLKLQQKLLD 273

Query: 64  TTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            TL  K ++   N+       ++++   K+L+ LDDV+E+ QL+ LIG+ + FG GSRI+
Sbjct: 274 DTLRTKGQIVLKNVYEGIKIIRDKLSSKKVLVFLDDVDELTQLEHLIGKHNWFGPGSRII 333

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTR K +L   R E   IY V  L F EA + FC +AFK++H  E     S  VV Y  
Sbjct: 334 ITTRKKDLLT--RHEVNDIYEVKKLNFHEALQLFCRYAFKQHHLKEGYADLSHQVVRYAD 391

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL L+VLGS L  KR  +W   L  L ++   EI    ++LKISF+ L    + IFLD
Sbjct: 392 GLPLALKVLGSLLFGKRLPNWKSELRKLEKVPNMEI---VNVLKISFDGLDYTQRMIFLD 448

Query: 241 IACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGN-FLNMHDILQEMGRQIVR 296
           IACFF+G D + V+ ILD SE +    ++ L+D+  ++IS +  + MHD+L +MG+ IV 
Sbjct: 449 IACFFKGGDVEIVSRILDGSEFNAESGINALVDRCFITISKDKTIEMHDLLAQMGKGIVD 508

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
           +E   EPG+RSRLW   +I RVLK N GT+ IEGIFLD+ K + I    +AF  M+ LR 
Sbjct: 509 EECPNEPGERSRLWRHTDIYRVLKRNTGTEKIEGIFLDVDKSEQIQFTCKAFERMNRLRX 568

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
                                 +S++++QLP    +    L  L WD Y L +LPSNF P
Sbjct: 569 L--------------------VVSHNRIQLPEDFVFSSDDLTCLSWDGYSLESLPSNFHP 608

Query: 417 KNLVELNLRCSKVEQPWEGEKACVPS----------------SIQNFKYLSALSFKGCQS 460
            +L  L L  S ++  W+G   C+ +                +  N   L  L   GC S
Sbjct: 609 NDLALLKLSNSNIKLLWKG-NMCLRNLRYIDLSHSQQLIELPNFSNVPNLEELILSGCVS 667

Query: 461 LRSFPSNLHFVCP-VTINFSYCVNLIEFPQIS---GKVTRLYLGQSAIEEVPSSIECLTD 516
           L S P ++H +   +T++ S C  L  FP+I    GK+  L L ++AI+E+PSSIE L  
Sbjct: 668 LESLPGDIHKLKHLLTLHCSGCSKLTSFPKIKCNIGKLEVLSLDETAIKELPSSIELLEG 727

Query: 517 LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM 562
           L  L L  CK L+ +  S C LR L  L L GC  L+  PE LE+M
Sbjct: 728 LRNLYLDNCKNLEGLPNSICNLRFLEVLSLEGCSKLDRLPEDLERM 773



 Score = 40.4 bits (93), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 87/211 (41%), Gaps = 39/211 (18%)

Query: 633 NMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNN 692
           N LR L  SH +     P  F+     +  L    Y++  +P    + + L +L LS +N
Sbjct: 564 NRLRXLVVSHNR--IQLPEDFVFSSDDLTCLSWDGYSLESLPSNF-HPNDLALLKLSNSN 620

Query: 693 FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC--LKYLHLIDCKMLQSLPVLPFCLE- 749
            + L      +  LR+I L     L  LP       L+ L L  C  L+SLP     L+ 
Sbjct: 621 IKLLWKGNMCLRNLRYIDLSHSQQLIELPNFSNVPNLEELILSGCVSLESLPGDIHKLKH 680

Query: 750 --SLDLTGCNMLRSLP--------------------ELPLCLQYLN------LEDCNMLR 781
             +L  +GC+ L S P                    ELP  ++ L       L++C  L 
Sbjct: 681 LLTLHCSGCSKLTSFPKIKCNIGKLEVLSLDETAIKELPSSIELLEGLRNLYLDNCKNLE 740

Query: 782 SLPELPLC----LQLLTVRNCNRLQSLPEIL 808
            LP   +C    L++L++  C++L  LPE L
Sbjct: 741 GLPN-SICNLRFLEVLSLEGCSKLDRLPEDL 770


>gi|225460157|ref|XP_002276248.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1253

 Score =  359 bits (921), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 238/594 (40%), Positives = 344/594 (57%), Gaps = 63/594 (10%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+I+GIWGM GIGKTTLA AIF++F ++FEG  F  +V G      G+E LQ+++LS  L
Sbjct: 211 VRIIGIWGMSGIGKTTLAGAIFERFRNQFEGCVFFENV-GTELEREGIEGLQEKLLSKIL 269

Query: 67  SEK-LEVAG-PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
             K L + G P+I    K  +   K+LIVLD+V +   ++++  + D FG GSRI++TT 
Sbjct: 270 GLKNLSLTGRPSI----KAALGSKKVLIVLDNVKDQMIIEKIAKKRDWFGVGSRIIITTT 325

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           +K VL     E K+IY V   + +EA + F  +AFK++H  +D    S+S+++ T G PL
Sbjct: 326 NKNVLRTH--EVKEIYEVKKFDGDEAMKLFSRYAFKQDHPRKDFVELSKSIIACTHGLPL 383

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            +++LG  L  K K  W   L  LN+  +  I    + L++S+N+L    + +FLDIACF
Sbjct: 384 AIKLLGDLLFEKSKHEWESKLDKLNKDLKLGI----NCLQMSYNELNDDEQCLFLDIACF 439

Query: 245 FEGEDKDFVASILDDSES---DVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F+GED D+VA ILD+      D +  L+DKSL++ISGN L MHD+LQEMGR++V Q+S+ 
Sbjct: 440 FKGEDIDYVAKILDNHNRCPIDGIHALVDKSLITISGNKLQMHDLLQEMGREVVCQKSQ- 498

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIK-GINLDPRAFTNMSNLRLFKFY 360
           EPGKR+RLW  ++IS VLK+NKGT+ +EGI LDLS +K  +  +  AF  M+ L+L K Y
Sbjct: 499 EPGKRTRLWKHEDISLVLKNNKGTEEVEGISLDLSHVKEKLRFETPAFARMNKLKLLKVY 558

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                      +     +     V    G  +   +LRYLH   Y L++LP++F  +NLV
Sbjct: 559 -----------NSGGASKKGNCNVHFSQGFKFHYDELRYLHLHGYNLKSLPNDFNAENLV 607

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
            L++  S V+Q W+G K                   G + L+S            I+ S+
Sbjct: 608 HLSMPHSYVQQLWKGSK-------------------GMEKLKS------------IDLSH 636

Query: 481 CVNLIEFPQISGKVTRLYL---GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
              L E P  SG V    L   G  ++ ++ +SI  L  L++L+LR CK LK +S S C 
Sbjct: 637 STRLTETPNFSGVVNLEQLILQGCISLRKLHTSIGVLNKLKLLNLRDCKMLKSLSESICC 696

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
           L SL TL++ GC  L+ FPE L K+E LK +Y+D T +TE+PSS   L  LE  
Sbjct: 697 LSSLQTLVVSGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNLETF 750



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 134/543 (24%), Positives = 200/543 (36%), Gaps = 121/543 (22%)

Query: 562  MEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG-SLEYLYYILAAA 619
            ME LK I  S  T +TE P+ F  +  LE L ++ C  L  L  +IG   +     L   
Sbjct: 626  MEKLKSIDLSHSTRLTETPN-FSGVVNLEQLILQGCISLRKLHTSIGVLNKLKLLNLRDC 684

Query: 620  SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
              +  L  S+   + L++L  S C  L+ FP   L  L  +  L+  + AV E+P  + +
Sbjct: 685  KMLKSLSESICCLSSLQTLVVSGCCKLKKFPEN-LGKLEMLKELYADETAVTEVPSSMGF 743

Query: 680  LSSLEILYLSGNNFESLPA----IIKQMSQLRFI--HLE-----------DFNMLQSLPE 722
            L +LE     G    S PA    +  +   + FI  H+            D N+L     
Sbjct: 744  LKNLETFSFQGRKGPS-PAPSSMLRTRSDSMGFILPHVSGLSSLLKLNLSDRNILDGARL 802

Query: 723  LPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRS 782
              L L     I      +   LP C+  L L G               +L  ++C  L++
Sbjct: 803  SDLGLLSSLKILILNGNNFDTLPGCISQLFLLG---------------WLESKNCQRLQA 847

Query: 783  LPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC 842
            LPELP  +  +   NC  L+++    L    L  + L++  + +  L+   E   SAA  
Sbjct: 848  LPELPSSIGYIGAHNCTSLEAVSNQSL-FSSLMIAKLKEHPRRTSQLEHDSEGQLSAA-- 904

Query: 843  FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEI 902
              FT                                                +V PGS I
Sbjct: 905  --FT------------------------------------------------VVAPGSGI 914

Query: 903  PDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLD------SKKVDSDCFR--YFYVSF 954
            PDW S QSSG  + ++LPP+      + FA C V        +  ++  C +   FY + 
Sbjct: 915  PDWISYQSSGREVTVKLPPNWFTTYFLAFASCVVTSPSVLPYADSINELCTKCTVFYSTS 974

Query: 955  QFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYH-HTIATFKFF 1013
                    +    H          E  ++SD V L +     V FP   + H +   KF 
Sbjct: 975  SCVSSSYDVFPRSHA---------EGRMESDHVWLRY-----VRFPISINCHEVTHIKFS 1020

Query: 1014 AERKF---YKIKRCGLCPVYANPSETKDNTFTINFAT-----EVWKLDDLPSASGTLDVE 1065
             E        IKRCG+  VY N  E  +N   I F +      +   D  PS SG  +V+
Sbjct: 1021 FEMILGTSSAIKRCGVGLVYGNDDENYNNPGMIQFNSIFSPPNLEIHDGEPSGSGCSNVD 1080

Query: 1066 ELE 1068
              E
Sbjct: 1081 GSE 1083


>gi|356550897|ref|XP_003543819.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 970

 Score =  358 bits (920), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 234/619 (37%), Positives = 346/619 (55%), Gaps = 58/619 (9%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S  V+I+GIWGMGGIGKTTLA A++D+ S EFEG CF+++VR  S+  G  + L+ ++ 
Sbjct: 207 GSSKVRILGIWGMGGIGKTTLASALYDKLSPEFEGCCFLANVREESDKHG-FKALRNKLF 265

Query: 63  STTLSEK---LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           S  L  +    + +   + HF   R+ R K+ IVLDDV+   QL+ LI + D  G GSR+
Sbjct: 266 SELLENENLCFDASSFLVSHFVLSRLGRKKVFIVLDDVDTSEQLENLIEDFDFLGLGSRV 325

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKEN---HCPEDLNWHSRSVV 176
           +VTTR+K++  +      KIY+V  L    + + FC   F+E    H  EDL   SRS +
Sbjct: 326 IVTTRNKQIFSQV----DKIYKVKELSIHHSLKLFCLSVFREKQPKHGYEDL---SRSAI 378

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           SY KG PL L+VLG+SL  + K  W   L  L +    EIH++   LK+S++ L    K 
Sbjct: 379 SYCKGIPLALKVLGASLRSRSKQAWECELRKLQKFPNMEIHNV---LKLSYDGLDYSQKE 435

Query: 237 IFLDIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGR 292
           IFLDIACF  G+ +D V SIL   D   +  +++L+DK+L++ISG   + MHD++QEMG 
Sbjct: 436 IFLDIACFLRGKQRDHVTSILEAFDFPAASGIEVLLDKALITISGGIQIEMHDLIQEMGW 495

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNM 351
           +IV QE  K+PG+RSRLW  +E+  VLK+NKGT+ +EG+ LDLSK+ + + L       M
Sbjct: 496 KIVHQEHIKDPGRRSRLWKHEEVHDVLKYNKGTEVVEGVILDLSKLTEDLYLSFDFLAKM 555

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
           +N+R  K +              +  + +   V LPNGLD L  KLRYLHWD + L +LP
Sbjct: 556 TNVRFLKIH--------------SWSKFTIFNVYLPNGLDSLSYKLRYLHWDGFCLESLP 601

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
           S F  + LVEL + CSK+++ W+G        +QN   L  +   G + L   P      
Sbjct: 602 SRFCAEQLVELCMHCSKLKKLWDG--------VQNLVNLKTIDLWGSRDLVEIPDLSKAE 653

Query: 472 CPVTINFSYCVNLIEFPQISGK---VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
              +++  YC +L +  Q+  K   V  LY G S++ E   + E LT+L +     C   
Sbjct: 654 KLESVSLCYCESLCQL-QVHSKSLGVLNLY-GCSSLREFLVTSEELTELNLAFTAICA-- 709

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHF---PEILEKMEHLKRIYSDRTPITELPSSFENL 585
             + +S  + R L +L L GC NL      P      +H   I +  + +  LP + ENL
Sbjct: 710 --LPSSIWQKRKLRSLYLRGCHNLNKLSDEPRFCGSYKH--SITTLASNVKRLPVNIENL 765

Query: 586 PGLEVLFVEDCSKLDNLPD 604
             + +++++DC KL +LP+
Sbjct: 766 SMMTMIWLDDCRKLVSLPE 784



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 28/275 (10%)

Query: 554 HFPEILEKMEH-LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           + P  L+ + + L+ ++ D   +  LPS F     +E+     CSKL  L D + +L  L
Sbjct: 575 YLPNGLDSLSYKLRYLHWDGFCLESLPSRFCAEQLVELCM--HCSKLKKLWDGVQNLVNL 632

Query: 613 YYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR 671
             I L  +  + ++P  ++ +  L S+   +C+ L        +   ++G+L++  Y   
Sbjct: 633 KTIDLWGSRDLVEIPD-LSKAEKLESVSLCYCESLCQLQ----VHSKSLGVLNL--YGCS 685

Query: 672 EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP-LCLKYL 730
            + + +     L  L L+     +LP+ I Q  +LR ++L   + L  L + P  C  Y 
Sbjct: 686 SLREFLVTSEELTELNLAFTAICALPSSIWQKRKLRSLYLRGCHNLNKLSDEPRFCGSYK 745

Query: 731 HLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCL 790
           H I   +  ++  LP  +E+L +               +  + L+DC  L SLPELPL L
Sbjct: 746 HSI-TTLASNVKRLPVNIENLSM---------------MTMIWLDDCRKLVSLPELPLFL 789

Query: 791 QLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKH 825
           + L+  NC  L +       LQ +  S +  L KH
Sbjct: 790 EKLSACNCTSLDTKITQQQVLQHMLQSRIPYLRKH 824


>gi|317415948|emb|CAR94514.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 2048

 Score =  358 bits (919), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 261/773 (33%), Positives = 391/773 (50%), Gaps = 116/773 (15%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S+ V+++GI GM GIGK+T+AKA+  +   +F+   F+S V G      GL H++KQ+ 
Sbjct: 221 GSEEVRVIGICGMPGIGKSTVAKALSQRIHSQFDAISFISKV-GEISKKKGLFHIKKQLC 279

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGE-----LDQFGQGS 117
              L +K  V   ++     +R+R  ++LI+LD+V+E+ Q++ + G       ++FG+GS
Sbjct: 280 DHLLDKK--VTTKDVDDVICKRLRDKRVLIILDNVDELEQIEAVAGSDGAGLSNRFGKGS 337

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+VTT D+R+L  +  E   IY +  L  ++A   FC  A K +H  +     S   V 
Sbjct: 338 RIIVTTTDERLLIDYNPE---IYTIEKLTPDQALLLFCRKALKTDHPTDAFKKLSNEFVD 394

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL-TPRVKS 236
           Y  G+PL LEV G SL  + + +W   L  L     S    I  +LK SF+ L     + 
Sbjct: 395 YIDGHPLALEVFGHSLWKREEDYWSTKLKSLKDKGYSGEKKIIGVLKASFDGLENQEQQD 454

Query: 237 IFLDIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQ 293
           +FLD ACFF+GED   +  I +         + IL +KSLVSI G  L MHD+LQ+MGR 
Sbjct: 455 MFLDTACFFKGEDVCRLEKIFESCGYYPGINITILCEKSLVSIVGGRLWMHDLLQKMGRG 514

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           +V  ES+KE G+RSRLW   +   VLK NKGTDA++GIFL   +   ++L    F+NM N
Sbjct: 515 LVLGESKKE-GERSRLWHHTDALPVLKKNKGTDAVQGIFLSSPQPDKVHLKKDPFSNMDN 573

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LRL K Y                       V+    L+YL  +L  L W   PL++LPS+
Sbjct: 574 LRLLKIY----------------------NVEFSGSLEYLSDELSLLEWHKCPLKSLPSS 611

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           F+P  LVELNL  S++E+             +  + L  L+                   
Sbjct: 612 FEPDKLVELNLSESEIEE----------LWEEIERPLEKLA------------------- 642

Query: 474 VTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
             +N S C  LI+ P                ++VP       +LE L L+GC  L  +  
Sbjct: 643 -VLNLSDCQKLIKTPDF--------------DKVP-------NLEQLILKGCTSLSAVPD 680

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG------ 587
               LRSL   IL GC  L+  PEI E M+ L++++ D T I ELP+S ++L G      
Sbjct: 681 DI-NLRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHLDGTAIEELPTSIKHLTGLILLNL 739

Query: 588 -------------------LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSS 628
                              L++L V  CS L+ LP+N+GSLE L  + A+ +AI +LP+S
Sbjct: 740 RDCKNLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSLECLQELYASRTAIQELPTS 799

Query: 629 VALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILY 687
           +     L  L+   CK L + P      L+++ +L++S  + + E+P+ +  L  L+ LY
Sbjct: 800 IKHLTDLTLLNLRECKNLLTLPDVICTNLTSLQILNLSGCSNLNELPENLGSLECLQELY 859

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
            SG     +P  I Q+SQL  + L+  + LQSLP LP  ++ + + +C +LQ 
Sbjct: 860 ASGTAISQIPESISQLSQLGELVLDGCSKLQSLPRLPFSIRAVSVHNCPLLQG 912



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 194/445 (43%), Gaps = 74/445 (16%)

Query: 514  LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT 573
            L  L VL+L  C++L + +  F K+ +L  LIL GC +L   P+ +              
Sbjct: 638  LEKLAVLNLSDCQKLIK-TPDFDKVPNLEQLILKGCTSLSAVPDDI-------------- 682

Query: 574  PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSN 633
                      NL  L    +  CSKL  LP+    ++ L  +    +AI +LP+S+    
Sbjct: 683  ----------NLRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHLDGTAIEELPTSIKHLT 732

Query: 634  MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILYLSGNN 692
             L  L+   CK L S P      L+++ +L++S  + + E+P+ +  L  L+ LY S   
Sbjct: 733  GLILLNLRDCKNLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSLECLQELYASRTA 792

Query: 693  FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC-----LKYLHLIDCKMLQSLPVLPF- 746
             + LP  IK ++ L  ++L +   L +LP++ +C     L+ L+L  C  L  LP     
Sbjct: 793  IQELPTSIKHLTDLTLLNLRECKNLLTLPDV-ICTNLTSLQILNLSGCSNLNELPENLGS 851

Query: 747  --CLESLDLTGCNMLRSLPELPLCLQYLN---LEDCNMLRSLPELPLCLQLLTVRNCNRL 801
              CL+ L  +G   +  +PE    L  L    L+ C+ L+SLP LP  ++ ++V NC  L
Sbjct: 852  LECLQELYASG-TAISQIPESISQLSQLGELVLDGCSKLQSLPRLPFSIRAVSVHNCPLL 910

Query: 802  QSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILA 861
            Q                      HS  +   P    SAA  F F     LN + ++ I  
Sbjct: 911  Q--------------------GAHSNKITVWP----SAAAGFSF-----LNRQRHDDIAQ 941

Query: 862  DSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
               L  +H+     +  +E AI        G       +EIP W S +S+ S+I I LP 
Sbjct: 942  AFWLPDKHLLWPFYQTFFEDAIRRDERFEYG----YRSNEIPAWLSRRSTESTITIPLPH 997

Query: 922  HSSCRN-LIGFAFCAVLD-SKKVDS 944
                ++  I  A C + + ++K DS
Sbjct: 998  DVDGKSKWIKLALCFICEAAQKHDS 1022



 Score = 43.1 bits (100), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 4/53 (7%)

Query: 897  LPGSEIPDWFSNQSSGSSICIQLPPH-SSCRNLIGFAFC---AVLDSKKVDSD 945
             P S   +WF +QSSGSSI + LPPH     N IG A C   +++D+   D D
Sbjct: 1674 FPSSITLEWFGDQSSGSSIRVPLPPHLYRATNWIGLALCTSFSIVDNPTADLD 1726


>gi|147812101|emb|CAN61526.1| hypothetical protein VITISV_036339 [Vitis vinifera]
          Length = 2047

 Score =  358 bits (919), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 258/719 (35%), Positives = 371/719 (51%), Gaps = 108/719 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNIP 78
           KTT+AKAI++  S+EF GSCF+ +VR  S+       LQ+++L   L  K L+V+  NI 
Sbjct: 217 KTTIAKAIYNDISYEFHGSCFLKNVRERSKD--NTLQLQQELLHGILRGKCLKVS--NIE 272

Query: 79  H---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGE 135
                 K  +   K+L+VLDDV+ + QL+ L  E + F   S +++TTRDKR L ++   
Sbjct: 273 EGLKMIKNCLNSKKVLVVLDDVDALKQLEYLAEEPEWFSTKSIVIITTRDKRFLTQYGKH 332

Query: 136 EKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
               Y V  L  EE+ E F  +AFK+N   E     S  ++ Y KG PL L+VLGS    
Sbjct: 333 VS--YEVEKLNEEESIELFSRWAFKQNLPQEAYRNLSYHIIEYAKGLPLALKVLGSFFLG 390

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           K +S W + LH L +I   EI ++   LKIS++ L    K IFLDIACFFEGEDK+ V+ 
Sbjct: 391 KTRSQWKEALHKLEKIPHIEIQNV---LKISYDGLNDIEKGIFLDIACFFEGEDKEVVSR 447

Query: 256 ILDDSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
           IL +   +  + IL DK L++I  N L MH+++Q+MG +IVRQE  KEPGK SRLWDP++
Sbjct: 448 ILHNVSIECGISILHDKGLITILENKLEMHNLIQQMGHEIVRQECPKEPGKWSRLWDPED 507

Query: 315 ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
           + RVL  N GT+AIEGI LD+S  + I     AF  M+ LRL   +    Y+   +    
Sbjct: 508 VYRVLTKNTGTEAIEGIILDISASEQIQFTTEAFKMMNRLRLLIVHQDAKYD-SMVEHHV 566

Query: 375 TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
             +Q+  SK+ LP        +L +LHWD Y L +LPSNF+  NLVEL+LRCS ++Q  E
Sbjct: 567 VGDQVQLSKMHLPANFQIPSFELTFLHWDGYSLESLPSNFQADNLVELHLRCSNIKQLCE 626

Query: 435 GEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
           G                               N+ F     IN S+ V+LI+ P I+   
Sbjct: 627 G-------------------------------NMIFNILKVINLSFSVHLIKIPDITS-- 653

Query: 495 TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
                       VP       +LE+L L GC  L  + +   KL+ L TL    CL L  
Sbjct: 654 ------------VP-------NLEILILEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRS 694

Query: 555 FPEILEKMEHLKRIYSDRTPITELPS-SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
           FPEI E+M++L+ +Y   T + ELPS S ++L GL  L +  C  L ++P +I ++    
Sbjct: 695 FPEIKERMKNLRELYLSETDLKELPSSSTKHLKGLTDLDLTGCRNLIHVPKSICAMR--- 751

Query: 614 YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAVR 671
                                L++L  S+C  L+  P     L  L ++ L    ++   
Sbjct: 752 --------------------SLKALSFSYCPKLDKLPEDLESLPCLESLSL----NFLRC 787

Query: 672 EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
           E+P  +            GN+F ++PA I ++ +LR ++L     L  +PELP  L+ L
Sbjct: 788 ELPCXV-----------RGNHFSTIPAGISKLPRLRSLNLSHCKKLLQIPELPSSLRAL 835



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 147/274 (53%), Gaps = 30/274 (10%)

Query: 496  RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
            +L L  +   E+P+ IEC   L+ L LR C++L+ + +  CKL+SL +L   GC  L+ F
Sbjct: 1079 KLCLAGNEFYELPT-IECPLALDSLCLRNCEKLESLPSDICKLKSLKSLFCSGCSELKSF 1137

Query: 556  PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS------------------ 597
            PEI+E ME+L+++Y ++T I ELPSS ++L GL+ L VE C                   
Sbjct: 1138 PEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTSLKVL 1197

Query: 598  ------KLDNLPDNIGSLEYL--YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
                  KL  LP+N+GSL  L   Y   + S   QLPS   L + LR LD  +    +  
Sbjct: 1198 VVDCCPKLYKLPENLGSLRSLEELYATHSYSIGCQLPSLSGLCS-LRILDIQNSNLSQRA 1256

Query: 650  PRTFLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
                +  L ++ LL++S++ + E  IP+EI  LSSL+ L L GN+F S+P  I +++ LR
Sbjct: 1257 IPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGGNHFSSIPDGISRLTALR 1316

Query: 708  FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
             + L     L  +PE    L+ L +  C  L++L
Sbjct: 1317 VLDLSHCQNLLRIPEFSSSLQVLDVHSCTSLETL 1350



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 113/270 (41%), Gaps = 58/270 (21%)

Query: 410  LPSNFKPKNLVELNLR-CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            LP+   P  L  L LR C K+E         +PS I   K L +L   GC  L+SFP   
Sbjct: 1090 LPTIECPLALDSLCLRNCEKLES--------LPSDICKLKSLKSLFCSGCSELKSFP--- 1138

Query: 469  HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
                             E  +    + +LYL Q+AIEE+PSSI+ L  L+ L +  C  L
Sbjct: 1139 -----------------EIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNL 1181

Query: 529  KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPIT--ELPSSFENLP 586
              +  S C L SL  L++  C  L   PE L  +  L+ +Y+  +     +LP S   L 
Sbjct: 1182 VSLPESICNLTSLKVLVVDCCPKLYKLPENLGSLRSLEELYATHSYSIGCQLP-SLSGLC 1240

Query: 587  GLEVLFVEDCS----------------KLDNL----------PDNIGSLEYLYYILAAAS 620
             L +L +++ +                KL NL          P  I +L  L  +L   +
Sbjct: 1241 SLRILDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGGN 1300

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFP 650
              S +P  ++    LR LD SHC+ L   P
Sbjct: 1301 HFSSIPDGISRLTALRVLDLSHCQNLLRIP 1330



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 157/379 (41%), Gaps = 74/379 (19%)

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
            LPS    L  L+ LF   CS+L + P+ + ++E L  +    +AI +LPSS+     L+ 
Sbjct: 1113 LPSDICKLKSLKSLFCSGCSELKSFPEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQC 1172

Query: 638  LDSSHCKGLESFPRTFLLGLSAMGLLHISDY-AVREIPQEIAYLSSLEILYLS-----GN 691
            L    C  L S P + +  L+++ +L +     + ++P+ +  L SLE LY +     G 
Sbjct: 1173 LSVESCDNLVSLPES-ICNLTSLKVLVVDCCPKLYKLPENLGSLRSLEELYATHSYSIGC 1231

Query: 692  NFESLPAIIKQMSQLRFIHLEDFNMLQ-SLPELPLCLKYLHLIDCKMLQ----SLPVLPF 746
               SL      +  LR + +++ N+ Q ++P    CL  L L++          +P   +
Sbjct: 1232 QLPSLSG----LCSLRILDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIY 1287

Query: 747  CLESLD--LTGCNMLRSLPE---LPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRL 801
             L SL   L G N   S+P+       L+ L+L  C  L  +PE    LQ+L V +C  L
Sbjct: 1288 NLSSLQALLLGGNHFSSIPDGISRLTALRVLDLSHCQNLLRIPEFSSSLQVLDVHSCTSL 1347

Query: 802  QSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILA 861
            ++L                     SP                             + +L 
Sbjct: 1348 ETLS--------------------SP-----------------------------SNLLQ 1358

Query: 862  DSLLRIRHMAIASLRLGYEMAINEKLSE-LRGSL-IVLP-GSEIPDWFSNQSSGSSICIQ 918
              LL+     I  L L  ++ I   ++  L G + I +P  S IP+W   Q  GS +  +
Sbjct: 1359 SCLLKCFKSLIQDLELENDIPIEPHVAPYLNGGISIAIPRSSGIPEWIRYQKEGSKVAKK 1418

Query: 919  LPPH-SSCRNLIGFAFCAV 936
            LP +     + +GFA  ++
Sbjct: 1419 LPRNWYKNDDFLGFALFSI 1437



 Score = 46.6 bits (109), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 72/162 (44%), Gaps = 36/162 (22%)

Query: 686  LYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP 745
            L L+GN F  LP I                      E PL L  L L +C+ L+SLP   
Sbjct: 1080 LCLAGNEFYELPTI----------------------ECPLALDSLCLRNCEKLESLPS-D 1116

Query: 746  FC----LESLDLTGCNMLRSLPELPLCLQ-----YLNLEDCNMLRSLPELPLCLQLLTVR 796
             C    L+SL  +GC+ L+S PE+   ++     YLN      L S  +    LQ L+V 
Sbjct: 1117 ICKLKSLKSLFCSGCSELKSFPEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVE 1176

Query: 797  NCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKS 838
            +C+ L SLPE +  L  L   V++      P L   PE+L S
Sbjct: 1177 SCDNLVSLPESICNLTSLKVLVVD----CCPKLYKLPENLGS 1214



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 92/226 (40%), Gaps = 59/226 (26%)

Query: 584 NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
           ++P LE+L +E C+ L +LP +I  L+                        LR+L    C
Sbjct: 653 SVPNLEILILEGCTNLMSLPSDIYKLK-----------------------GLRTLCCREC 689

Query: 644 KGLESFPRTFLLGLSAMGLLHISDYAVREIPQE-IAYLSSLEILYLSG-NNFESLPAIIK 701
             L SFP      +  +  L++S+  ++E+P     +L  L  L L+G  N   +P  I 
Sbjct: 690 LKLRSFPE-IKERMKNLRELYLSETDLKELPSSSTKHLKGLTDLDLTGCRNLIHVPKSIC 748

Query: 702 QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLT------- 754
            M  L+ +       L  LPE               L+SLP    CLESL L        
Sbjct: 749 AMRSLKALSFSYCPKLDKLPE--------------DLESLP----CLESLSLNFLRCELP 790

Query: 755 ---GCNMLRSLP----ELPLCLQYLNLEDCNMLRSLPELPLCLQLL 793
                N   ++P    +LP  L+ LNL  C  L  +PELP  L+ L
Sbjct: 791 CXVRGNHFSTIPAGISKLPR-LRSLNLSHCKKLLQIPELPSSLRAL 835


>gi|105922867|gb|ABF81441.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
 gi|105922933|gb|ABF81445.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1378

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 258/732 (35%), Positives = 391/732 (53%), Gaps = 68/732 (9%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
           KTT+A+ ++D+F  +F+GSCF+++VR   +   G   LQ+Q++S  L ++  +   +   
Sbjct: 290 KTTVARVVYDRFRWQFKGSCFLANVREVFDEKDGPRRLQEQLVSEILMKRANICDSSRGI 349

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K +++R K+LIVLDDV++  QL+ L  E   FG GSRI++T+RD++VL   R    +
Sbjct: 350 EMIKRKLQRKKILIVLDDVDDRKQLESLAAESKWFGPGSRIIITSRDRQVLT--RNGVAR 407

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV+GS +  +  
Sbjct: 408 IYEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFMHGRSI 467

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             WG  ++ LN I + EI    D+L+ISF+ L    K IFLDIACF +G  KD +  ILD
Sbjct: 468 LEWGSAINRLNEIPDREI---IDVLRISFDGLHELEKKIFLDIACFLKGFKKDRIIRILD 524

Query: 259 DSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                      +LI+KSL+S+S + + MH++LQ MG++IVR ES +EPG+RSRLW  +++
Sbjct: 525 SCGFHAHIGTQVLIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDV 584

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
              L  N G + IE IFLD+  IK    + +AF+ MS LRL K                 
Sbjct: 585 CLALMDNTGKEKIEAIFLDIPGIKEAQWNMKAFSKMSKLRLLKI---------------- 628

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
                 + VQL  G + L  KLR+L W +YP ++LP+  +   LVEL++  S +EQ W G
Sbjct: 629 ------NNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIEQLWYG 682

Query: 436 EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG--K 493
            K+ V   I                               IN S  + L + P ++G   
Sbjct: 683 YKSAVKLKI-------------------------------INLSNSLYLSKSPDLTGIPN 711

Query: 494 VTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
           +  L L G  ++ EV  S+     L+ ++L  C+ + RI  S  ++ SL    L GC  L
Sbjct: 712 LESLILEGCISLSEVHPSLGRHKKLQYVNLINCRSI-RILPSNLEMESLKFFTLDGCSKL 770

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           E+FP+I+  M  L ++  DRT I EL  S  ++ GLEVL + +C KL+++  +I  L+ L
Sbjct: 771 ENFPDIVGNMNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISRSIECLKSL 830

Query: 613 YYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL-GLSAMGLLHISDYAV 670
             + L+  S +  +P ++     L   D S     +     FLL  L+ + L  +    +
Sbjct: 831 KKLDLSGCSELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKNLAVLSLDGLRACNL 890

Query: 671 REIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
           R +P++I  LSSL+ L LS NNF SLP  I Q+S L  + LED  ML+SL E+P  ++ +
Sbjct: 891 RALPEDIGCLSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTMLESLLEVPSKVQTV 950

Query: 731 HLIDCKMLQSLP 742
           +L  C  L+++P
Sbjct: 951 NLNGCISLKTIP 962


>gi|317415953|emb|CAR94518.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 2041

 Score =  357 bits (917), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 261/773 (33%), Positives = 392/773 (50%), Gaps = 116/773 (15%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S+ V+++GI GM GIGK+T+AKA+  +   +F+   F+S V G      GL H+++Q+ 
Sbjct: 221 GSEEVRVIGICGMPGIGKSTVAKALSQRIRSQFDAISFISKV-GEISKKEGLFHIKEQLC 279

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGE-----LDQFGQGS 117
              L +K  V   ++     +R+R  ++LI+LD+V+E+ Q++ + G       ++FG+GS
Sbjct: 280 DHLLDKK--VTTKDVDDVICKRLRDKRVLIILDNVDELEQIEAVAGSDGAGLSNRFGKGS 337

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+VTT D+R+L  +  E   IY +  L  ++A   FC  A K +H  +     S   V 
Sbjct: 338 RIIVTTTDERLLIDYNPE---IYTIEKLTPDQALLLFCRKALKTDHPTDAFKKLSNEFVD 394

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL-TPRVKS 236
           Y  G+PL LEV G SL  + + +W   L  L     S    I  +LK SF+ L     + 
Sbjct: 395 YIDGHPLALEVFGHSLWKREEDYWSTKLKSLKDKGYSGEKKIIGVLKASFDGLENQEQQD 454

Query: 237 IFLDIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQ 293
           +FLD ACFF+GED   +  I +         + IL +KSLVSI G  L MHD+LQ+MGR 
Sbjct: 455 MFLDTACFFKGEDVCRLEKIFESCGYYPGINITILCEKSLVSIVGGRLWMHDLLQKMGRG 514

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           +V  ES+KE G+RSRLW   +   VLK NKGTDA++GIFL L +   ++L    F+NM N
Sbjct: 515 LVLGESKKE-GERSRLWHHTDALPVLKKNKGTDAVQGIFLSLPQPDKVHLKKDPFSNMDN 573

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LRL K Y                       V+    L+YL  +L  L W   PL++LPS+
Sbjct: 574 LRLLKIY----------------------NVEFSGSLEYLSDELSLLEWHKCPLKSLPSS 611

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           F+P  LVELNL  S++E+             +  + L  L+                   
Sbjct: 612 FEPDKLVELNLSESEIEE----------LWEEIERPLEKLA------------------- 642

Query: 474 VTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
             +N S C  LI+ P                ++VP       +LE L L+GC  L  +  
Sbjct: 643 -VLNLSDCQKLIKTPDF--------------DKVP-------NLEQLILKGCTSLSAVPD 680

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL----- 588
               LRSL   IL GC  L+  PEI E M+ L++++ D T I ELP+S ++L GL     
Sbjct: 681 DI-NLRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHLDGTAIEELPTSIKHLTGLTLLNL 739

Query: 589 --------------------EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSS 628
                               ++L V  CS L+ LP+N+GSLE L  + A+ +AI +LP+S
Sbjct: 740 RDCKNLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSLECLQELYASRTAIQELPTS 799

Query: 629 VALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILY 687
           +     L  L+   CK L + P      L+++ +L++S  + + E+P+ +  L  L+ LY
Sbjct: 800 IKHLTDLTLLNLRECKNLLTLPDVICTNLTSLQILNLSGCSNLNELPENLGSLKCLKDLY 859

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
            S      +P  I Q+SQL  + L+  +MLQSLP LP  ++ + + +C +LQ 
Sbjct: 860 ASRTAISQVPESISQLSQLEELVLDGCSMLQSLPGLPFSIRVVSVQNCPLLQG 912



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 194/444 (43%), Gaps = 76/444 (17%)

Query: 514  LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT 573
            L  L VL+L  C++L + +  F K+ +L  LIL GC +L   P+ +              
Sbjct: 638  LEKLAVLNLSDCQKLIK-TPDFDKVPNLEQLILKGCTSLSAVPDDI-------------- 682

Query: 574  PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSN 633
                      NL  L    +  CSKL  LP+    ++ L  +    +AI +LP+S+    
Sbjct: 683  ----------NLRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHLDGTAIEELPTSIKHLT 732

Query: 634  MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILYLSGNN 692
             L  L+   CK L S P      L+++ +L++S  + + E+P+ +  L  L+ LY S   
Sbjct: 733  GLTLLNLRDCKNLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSLECLQELYASRTA 792

Query: 693  FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC-----LKYLHLIDCKMLQSLPVLPFC 747
             + LP  IK ++ L  ++L +   L +LP++ +C     L+ L+L  C  L  LP     
Sbjct: 793  IQELPTSIKHLTDLTLLNLRECKNLLTLPDV-ICTNLTSLQILNLSGCSNLNELPENLGS 851

Query: 748  LESL-DLTGC-NMLRSLPELPLCLQYLN---LEDCNMLRSLPELPLCLQLLTVRNCNRLQ 802
            L+ L DL      +  +PE    L  L    L+ C+ML+SLP LP  +++++V+NC  LQ
Sbjct: 852  LKCLKDLYASRTAISQVPESISQLSQLEELVLDGCSMLQSLPGLPFSIRVVSVQNCPLLQ 911

Query: 803  SLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILAD 862
                                  HS  +   P     +A  F F     L  + NN I   
Sbjct: 912  --------------------GAHSNKITVWP-----SAAGFSF-----LGRQGNNDIGQA 941

Query: 863  SLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLP--GSEIPDWFSNQSSGSSICIQLP 920
              L  +H+     +  +E AI       RG +       +EIP W S +S+ S+I I LP
Sbjct: 942  FWLPDKHLLWPFYQTFFEGAIQ------RGEMFEYGYRSNEIPAWLSRRSTESTITIPLP 995

Query: 921  PHSSCRN-LIGFAFCAVLDSKKVD 943
                 +N  I  A C V ++ + D
Sbjct: 996  HDLDGKNKWIKLALCFVCEAAQKD 1019



 Score = 46.6 bits (109), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 4/53 (7%)

Query: 897  LPGSEIPDWFSNQSSGSSICIQLPPH-SSCRNLIGFAFCA---VLDSKKVDSD 945
             P S   +WF +QSSGSSI + LPPH  S  N IGFA CA   ++++   D D
Sbjct: 1670 FPSSITLEWFGDQSSGSSIRVPLPPHLYSATNWIGFALCASFSIMENPTADLD 1722


>gi|255555353|ref|XP_002518713.1| Disease resistance protein RPS2, putative [Ricinus communis]
 gi|223542094|gb|EEF43638.1| Disease resistance protein RPS2, putative [Ricinus communis]
          Length = 1010

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 276/752 (36%), Positives = 388/752 (51%), Gaps = 129/752 (17%)

Query: 6   TVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTT 65
           +V+ VGIWGMGG+ KTTLA+AI+D+ + +FE  CF+S+ R   +    L  LQ Q+ ST 
Sbjct: 187 SVRKVGIWGMGGLDKTTLARAIYDRIAPQFESCCFLSNTREQLQRCT-LAQLQNQLFSTL 245

Query: 66  LSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLI--GELDQFGQGSRIVVT 122
           L E+  +   N+ P F K+R+   K+LI++DD +   QL+ L+   E D FG GSRI++T
Sbjct: 246 LEEQSTL---NLRPSFIKDRLCCKKVLIIIDDADNTTQLQELLLDTEPDYFGSGSRIIIT 302

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKE-NHCPEDLNWHSRSVVSYTKG 181
           +RDK+VL+    +E  IY +  L   EA + F   AFK+ N         +  VV Y KG
Sbjct: 303 SRDKQVLKSTCVDE--IYEMEELNEHEALQLFNFKAFKQDNPTGHHRRLQAERVVKYAKG 360

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
           NPL L VLGS+L  K K  W   L  L RI      DI ++L+ S++ L    +SIFLDI
Sbjct: 361 NPLALTVLGSTLFGKSKKDWESALERLKRIPHK---DIDEVLRTSYDGLDSEQRSIFLDI 417

Query: 242 ACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSIS--GNFLNMHDILQEMGRQIVR 296
           ACFF G++++F+  ILD    S   V+  LID+SL+ +S  G+ L +HD+LQEMGR+IV 
Sbjct: 418 ACFFRGQNQNFITKILDGYYVSAHIVISTLIDRSLIMLSSDGSKLELHDLLQEMGRKIVF 477

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLR 355
           +ES K PG RSRLW P+++  VL  NKGT+AIEGI LD SK    I L P  F+ M +LR
Sbjct: 478 EES-KNPGNRSRLWIPEDVCYVLNENKGTEAIEGISLDKSKATSKIRLRPDTFSRMYHLR 536

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
             KFY  K                   K+ L +GL   P +LR+L W+ +P+++LP NF 
Sbjct: 537 FLKFYTEKV------------------KISL-DGLQSFPNELRHLDWNDFPMKSLPPNFS 577

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
           P+NLV LNLR SKV++ W G         QN   L                         
Sbjct: 578 PQNLVVLNLRDSKVKKLWTG--------TQNLVKLKE----------------------- 606

Query: 476 INFSYCVNLIEFPQISGKVT--RLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRL---- 528
           I+ S+   LI  P +S  +   ++YL G S++EEV SS++ L  LE LDL  C +L    
Sbjct: 607 IDLSHSKYLIGIPDLSKAINIEKIYLTGCSSLEEVHSSLQYLNKLEFLDLGDCNKLRSLP 666

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
           +RI ++  K+  L +  +  C   +       ++E L         +  + SS  N   L
Sbjct: 667 RRIDSNVLKVLKLGSPRVKRCREFKG-----NQLETLNLYCPAIKNVASIISSILNSSRL 721

Query: 589 EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
             L V +C KL  LP +   ++ L  +  A  AI Q+PSS+   + L +L+ + CK LES
Sbjct: 722 VHLSVYNCRKLSILPSSFYKMKSLRSLDLAYCAIKQIPSSIEHLSQLIALNLTDCKYLES 781

Query: 649 FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
                                   +P  I  L  L  +YL  N+ ES             
Sbjct: 782 ------------------------LPSSIGGLPRLATMYL--NSCES------------- 802

Query: 709 IHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
                   L+SLPELPL L+ L   +CK L+S
Sbjct: 803 --------LRSLPELPLSLRMLFANNCKSLES 826



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 213/527 (40%), Gaps = 129/527 (24%)

Query: 516  DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY-SDRTP 574
            +L VL+LR  K +K++ T    L  L  + L     L   P+ L K  ++++IY +  + 
Sbjct: 580  NLVVLNLRDSK-VKKLWTGTQNLVKLKEIDLSHSKYLIGIPD-LSKAINIEKIYLTGCSS 637

Query: 575  ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
            + E+ SS + L  LE L + DC+KL +LP  I S   +  +L   S   +        N 
Sbjct: 638  LEEVHSSLQYLNKLEFLDLGDCNKLRSLPRRIDS--NVLKVLKLGSPRVKRCREFK-GNQ 694

Query: 635  LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI---PQEIAYLSSLEILYLSGN 691
            L +L+  +C  +++        L++  L+H+S Y  R++   P     + SL  L L+  
Sbjct: 695  LETLNL-YCPAIKNVASIISSILNSSRLVHLSVYNCRKLSILPSSFYKMKSLRSLDLAYC 753

Query: 692  NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESL 751
              + +P+ I+ +SQL                       L+L DCK L+SLP         
Sbjct: 754  AIKQIPSSIEHLSQL---------------------IALNLTDCKYLESLP--------- 783

Query: 752  DLTGCNMLRSLPELP-LCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
                     S+  LP L   YLN   C  LRSLPELPL L++L   NC  L+S       
Sbjct: 784  --------SSIGGLPRLATMYLN--SCESLRSLPELPLSLRMLFANNCKSLES------- 826

Query: 811  LQELDASVLEKLSKHSPDLQWAPESLKS-AAICFEFTNCLKLNGKANNKILADSLLRIRH 869
                                   ES+ S   +   F NCL+L        + D L+    
Sbjct: 827  -----------------------ESITSNRHLLVTFANCLRLRFDQTALQMTDFLVP--- 860

Query: 870  MAIASLRLGYEMAINEKLSELRGSLIVL-PGSEIPDWFSNQSSGSSICIQLPPHSSCRNL 928
                              + + G    L PGSE+P WFSNQS GSS+ +Q P +    N 
Sbjct: 861  ------------------TNVPGRFYWLYPGSEVPGWFSNQSMGSSVTMQSPLNMYMLNA 902

Query: 929  IGFAFCAVLDSKKVDSDCFRY---------FYVSFQFDLEIKTLSETKHVDLGYNSRYIE 979
            I  AFC V + KK    CF+           + S Q       L++T HV + +N     
Sbjct: 903  I--AFCIVFEFKKPSYCCFKVECAEDHAKATFGSGQI-FSPSILAKTDHVLIWFNC--TR 957

Query: 980  DLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGL 1026
            +L  S R+   F           YH   A  +     K  K+KRCG 
Sbjct: 958  ELYKSTRIASSFY---------FYHSKDADKE--ESLKHCKVKRCGF 993


>gi|224126507|ref|XP_002319855.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222858231|gb|EEE95778.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1741

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 305/968 (31%), Positives = 456/968 (47%), Gaps = 220/968 (22%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
            KTT+A+ ++D+   +F+GSCF+++VR       G   LQ+Q+LS  +S +L  A  +   
Sbjct: 711  KTTVARVMYDRIRWQFQGSCFLANVREVFAEKDGRCRLQEQLLSE-ISMELPTARDSSRR 769

Query: 80   --FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
                K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+R+K VL+       
Sbjct: 770  IDLIKRRLRLKKVLLILDDVDDEEQLQMLAAEHGSFGPGSRIIITSRNKHVLDSH--GVT 827

Query: 138  KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
            +IY  + L  ++A   F   AFK +   EDL+  S+ VV Y  G PL LEV+GS L  + 
Sbjct: 828  RIYEADKLNDKDALMLFSWKAFKRDQPAEDLSELSKQVVGYANGLPLALEVIGSFLHKRG 887

Query: 198  KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
               W   +  +N I + +I    D+L+ISF+ L    K IFLDIACF +G  KD +A +L
Sbjct: 888  LREWKSAIDRMNDIPDRKI---IDVLRISFDGLHELEKKIFLDIACFLKGMKKDRIARLL 944

Query: 258  DDS--ESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
            D     +D+ +  LI+KSL+S+S + + MH++LQ+MG +IVR ES +EPG+RSRL   K+
Sbjct: 945  DSCGFHADIGMQALIEKSLISVSRDEIRMHNLLQKMGEEIVRCESPEEPGRRSRLCTYKD 1004

Query: 315  ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
            +   L+ +  T+ I+ IFLDL K K    +  AF+ M+ LRL K +              
Sbjct: 1005 VCDALEDS--TEKIQSIFLDLPKAKEAQWNMTAFSKMTKLRLLKIH-------------- 1048

Query: 375  TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
                     V L  G +YL K+LR+L W  YP ++LP+ F+P  LVEL + CS +EQ W 
Sbjct: 1049 --------NVDLSEGPEYLSKELRFLEWHAYPSKSLPACFRPDELVELYMSCSSIEQLWC 1100

Query: 435  GEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
            G K  V     N K                           IN S  + LI  P  +G  
Sbjct: 1101 GCKILV-----NLK--------------------------IINLSNSLYLINTPDFTG-- 1127

Query: 495  TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
                               + +LE L L GC  L  +  SF + + L  + L+ C +L  
Sbjct: 1128 -------------------IPNLESLILEGCASLSEVHPSFGRHKKLQLVNLVNCYSLRI 1168

Query: 555  FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
             P  LE                        +  LEV  +  CSKLD  PD +G++  L  
Sbjct: 1169 LPSNLE------------------------MESLEVCTLSSCSKLDKFPDIVGNINCLRE 1204

Query: 615  ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREI 673
            +    +AI++L SS      L  L  ++CK LES P + + GL ++  L +SD + ++ I
Sbjct: 1205 LRLDGTAIAKLSSSFHCLAGLVLLSMNNCKNLESIPSS-IRGLKSLKRLDVSDCSELKNI 1263

Query: 674  PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI 733
            P+ +  + SLE    SG +    P                F +L++L       K L   
Sbjct: 1264 PENLGEVESLEEFDASGTSIRQPPT--------------SFFLLKNL-------KVLSFK 1302

Query: 734  DCKML------QSLPVLP-FC-LESLDLTGCNMLR-SLPELPLC---------------- 768
             CK +      Q LP L   C LE LDL  CN+   ++PE   C                
Sbjct: 1303 GCKRIAVNLTDQILPSLSGLCSLEELDLCACNLGEGAVPEDIGCLSSLRSLNLSRNNFIS 1362

Query: 769  ----------LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPE-ILLCLQELDAS 817
                      L+ L L+DC ML SLPE+PL +Q + +  C +L+ +P+ I LC       
Sbjct: 1363 LPKSINQLSRLEKLALKDCVMLESLPEVPLKVQKVKLDGCLKLKEIPDPIKLC------- 1415

Query: 818  VLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKL---NGKANNKILADSLLRIRHMAIAS 874
                             SLK +   F+  NC +L   NG+ N   +  ++L  +++  +S
Sbjct: 1416 -----------------SLKRSE--FKCLNCWELYMHNGQNN---MGLNMLE-KYLQGSS 1452

Query: 875  LRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPH---SSCRNLIGF 931
             R G+ +A+              PG+EIP WF++QS  SSI +Q+P +         +GF
Sbjct: 1453 PRPGFGIAV--------------PGNEIPGWFTHQSKESSIRVQMPSNYLDGDDNGWMGF 1498

Query: 932  AFCAVLDS 939
            A CA   +
Sbjct: 1499 AACAAFST 1506



 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/423 (38%), Positives = 240/423 (56%), Gaps = 35/423 (8%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+ ++D+   +F GSCF+++VR       GL  LQ+Q+LS  +S +L  A  +   
Sbjct: 230 KTTVARVLYDRIRWQFGGSCFLANVREVFAEKDGLCRLQEQLLSE-ISMELPTARDSSRR 288

Query: 80  --FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
               K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+R+K VL+       
Sbjct: 289 IDLIKRRLRLKKVLLILDDVDDEEQLQMLAAEHGTFGPGSRIIITSRNKHVLDSH--GVT 346

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           +IY  + L  ++A   F   AFK +   EDL+  S+ VV Y  G PL LEV+GS L  + 
Sbjct: 347 RIYEADKLNDKDALMLFSWKAFKRDQPAEDLSELSKQVVGYANGLPLALEVIGSFLHKRG 406

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W   +  +N I + +I    D+L+ISF+ L    K IFLDIACF +G  KD +  +L
Sbjct: 407 LREWKSAIDRMNDIPDRKI---IDVLRISFDGLHELEKKIFLDIACFLKGMKKDRITRLL 463

Query: 258 DDS--ESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
           D     +D+ +  LI+KSL+ +S + + MH++LQ+MG +IVR ES +EPG+RSRL   K+
Sbjct: 464 DSCGFHADIGMQALIEKSLIRVSRDEIRMHNLLQKMGEEIVRCESPEEPGRRSRLCTYKD 523

Query: 315 ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
           +   LK + G   IE IF+DL K K    +  AF+ M+ LRL K +              
Sbjct: 524 VCDALKDSTGK--IESIFVDLPKAKEAPWNMTAFSKMTKLRLLKIH-------------- 567

Query: 375 TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
                    V L  G +YL  +LR+L W  YP ++LP+ F+  +LVEL + CS +EQ W 
Sbjct: 568 --------NVDLSEGPEYLSNELRFLEWHAYPSKSLPACFRLDDLVELYMSCSSIEQLWC 619

Query: 435 GEK 437
           G K
Sbjct: 620 GCK 622


>gi|297741023|emb|CBI31335.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score =  355 bits (912), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 284/784 (36%), Positives = 410/784 (52%), Gaps = 93/784 (11%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+AKAI++  S++F+GS F+++VR  S+       LQ+++L   L  K     P + +
Sbjct: 229 KTTIAKAIYNDISYQFDGSSFLNNVRERSKDNA--LQLQQELLHGILKGK----SPKVSN 282

Query: 80  F------TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFR 133
                   K  +   ++L+V DDV+++ Q++ L  E   FG  SRI++TTR K  L ++ 
Sbjct: 283 MDEGIQMIKRSLSSKRVLVVFDDVDDLMQIENLAEEHSWFGPRSRIIITTRHKHFLTQYG 342

Query: 134 GEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSL 193
            +E   Y V  L   EA E F  +AFK+N   E     S  VV Y KG PL LEVLGS L
Sbjct: 343 VKES--YEVPILHDAEAIELFSWWAFKQNLPNEIYKNLSYQVVDYAKGLPLALEVLGSFL 400

Query: 194 CLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFV 253
             K  S W   L  L  I    I ++   LKIS++ L    K IFLDIACFF+G+DKDFV
Sbjct: 401 FKKTISEWESALCKLKTIPHMGIQNV---LKISYDGLDDVEKGIFLDIACFFKGKDKDFV 457

Query: 254 ASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLW 310
           + +LD+   +ES +  +L DK L+SISGN L+MHD+LQ+MG +IVRQE  KEPG+RSRLW
Sbjct: 458 SRMLDEDFYAESGI-GVLHDKCLISISGNKLDMHDLLQQMGWEIVRQECPKEPGRRSRLW 516

Query: 311 DPKEISRVLKHNKGTDAIEGIFLDLSKIKGI-NLDPRAFTNMSNLRLFKFYVPKFYEIEK 369
           + ++I  VLK N G++ IEGIFLDLS ++ I +    AF  M  LRL K Y  K    + 
Sbjct: 517 EQEDIFDVLKRNMGSEKIEGIFLDLSHLEDILDFTTEAFAGMKKLRLLKVYNSKSILGDF 576

Query: 370 LPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKV 429
             + +   +++  +V+  +   +    LRYL+W  Y L++LP +F PK+LV+L++  S +
Sbjct: 577 GDTFTFNNKVN-CRVRFAHEFKFCSDDLRYLYWHGYSLKSLPKDFSPKHLVDLSMPYSHI 635

Query: 430 EQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
           ++ W                      KG + L+S  S         ++ S+   LIE P 
Sbjct: 636 KKLW----------------------KGIKVLKSLKS---------MDLSHSKCLIETPD 664

Query: 490 ISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLIL 546
            SG   + RL L G   + EV  S+  L  L  L L+ CK L+R+ +     +SL TLIL
Sbjct: 665 FSGITNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCKMLRRLPSRIWNFKSLRTLIL 724

Query: 547 LGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNI 606
            GC   E FPE    +E LK ++ D T +  LP S  ++  L+ L    C          
Sbjct: 725 SGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRNLKKLSFRGCGP-------- 776

Query: 607 GSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHIS 666
            S  +L+   ++ S    +PSS  L   L+ LD S C                    +IS
Sbjct: 777 ASASWLWSKRSSNSICFTVPSSSNLC-YLKKLDLSDC--------------------NIS 815

Query: 667 DYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC 726
           D A       + +LSSLE L LSGNNF +LP  +  +S L F+ LE+   LQ+LP+ P  
Sbjct: 816 DGANL---GSLGFLSSLEDLNLSGNNFVTLPN-MSGLSHLVFLGLENCKRLQALPQFPSS 871

Query: 727 LKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLP 784
           L+ L ++      +LP +     L++L L  C  L +LP+LP  ++ LN  DC  L +  
Sbjct: 872 LEDL-ILRGNNFVTLPNMSGLSHLKTLVLGNCKRLEALPQLPSSIRSLNATDCTSLGTTE 930

Query: 785 ELPL 788
            L L
Sbjct: 931 SLKL 934



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 138/327 (42%), Gaps = 58/327 (17%)

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDS 640
           F  +  LE L +E C  L  +  ++G L+ L ++ L     + +LPS +     LR+L  
Sbjct: 665 FSGITNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCKMLRRLPSRIWNFKSLRTLIL 724

Query: 641 SHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAII 700
           S C   E FP  F   L  +  LH     VR +P     + +L+ L   G      PA  
Sbjct: 725 SGCSKFEEFPENFG-NLEMLKELHEDGTVVRALPPSNFSMRNLKKLSFRGCG----PASA 779

Query: 701 KQMSQLRFIHLEDFNMLQSLPELPLC-LKYLHLIDCKM-----LQSLPVLPFCLESLDLT 754
             +   R  +   F +  S     LC LK L L DC +     L SL  L   LE L+L+
Sbjct: 780 SWLWSKRSSNSICFTVPSSSN---LCYLKKLDLSDCNISDGANLGSLGFLS-SLEDLNLS 835

Query: 755 GCNMLRSLPELPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVR---------------- 796
           G N + +LP +     L +L LE+C  L++LP+ P  L+ L +R                
Sbjct: 836 GNNFV-TLPNMSGLSHLVFLGLENCKRLQALPQFPSSLEDLILRGNNFVTLPNMSGLSHL 894

Query: 797 ------NCNRLQSLPEILLCLQELDAS------VLEKLSKHSPDLQWAPESLKS-AAICF 843
                 NC RL++LP++   ++ L+A+        E L    P   W  ESL S  A   
Sbjct: 895 KTLVLGNCKRLEALPQLPSSIRSLNATDCTSLGTTESLKLLRP---WELESLDSDVAFVI 951

Query: 844 EFTNCLKLNGKANNKILADSLLRIRHM 870
             T CL L       ++  S L + HM
Sbjct: 952 PGTTCLSL-------VMGRSFLGLWHM 971


>gi|356497765|ref|XP_003517729.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1135

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 253/712 (35%), Positives = 374/712 (52%), Gaps = 107/712 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL--SEKLEVAGPNI 77
           KTTLA A++ +    FEG CF+ +VR  +E  G L+ L+ ++ S  L     L    P +
Sbjct: 231 KTTLATALYAKLFSRFEGHCFLGNVREQAEKQG-LDFLRTKLFSELLPGENHLHENMPKV 289

Query: 78  P-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
             HF   R++R K+ +VLDDV    QL+ LI + + FG GSR++VTTRDK +        
Sbjct: 290 EYHFITRRLKRKKVFLVLDDVASSEQLEDLIDDFNCFGPGSRVIVTTRDKHIFSYV---- 345

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
            +IY V  L   ++ + FC  AF+E H        S SV++Y KGNPL L+VLG+ L  +
Sbjct: 346 DEIYEVKELNDLDSLQLFCLNAFREKHPKNGFEELSESVIAYCKGNPLALKVLGARLRSR 405

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
            +  W   L  L +I   +IH++   LK+SF+ L    + IFLDIACFF+GE +D + S+
Sbjct: 406 SEQAWYCELRKLQKIPNVKIHNV---LKLSFDDLDHTEQEIFLDIACFFKGEYRDHIISL 462

Query: 257 LDDSE---SDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           L+      +  +++L DKSL++IS  + + MHD++QEMG  IV QES K+PGKRSRLWDP
Sbjct: 463 LEACNFFPAIGIEVLADKSLITISPEDTIEMHDLIQEMGWNIVHQESIKDPGKRSRLWDP 522

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
           +E+  VLK+N+GT+AIEGI LDLSKI+ ++L   +FT M+N+R  KFY  K+        
Sbjct: 523 EEVFDVLKYNRGTEAIEGIILDLSKIEDLHLSFDSFTKMTNVRFLKFYYGKWS------- 575

Query: 373 MSTEEQLSYSKVQLP-NGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
                  S  K+ LP NGL  L  KLR+L W  Y L +LPS F  K LVEL +  S +++
Sbjct: 576 -------SKGKIYLPKNGLKSLSDKLRHLQWHGYCLESLPSTFSAKFLVELVMPYSNLQK 628

Query: 432 PWEG------------------------EKAC---------------VPSSIQNFKYLSA 452
            W+G                         KA                V  SI +   L +
Sbjct: 629 LWDGVQNLVNLKDIDLRYCENLVEVPDLSKATNLEDLSLSQCKSLRQVHPSILSLPKLQS 688

Query: 453 LSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIE 512
           L  +GC  ++S  S++H      +  S C +L EF  +S ++ RL+L  + I+E+P+SI 
Sbjct: 689 LDLEGCIEIQSLQSDVHLESLQDLRLSNCSSLKEFSVMSVELRRLWLDGTHIQELPASIW 748

Query: 513 CLTDLEVLDLRGCKRL----------------KRISTSFCK-------------LRSLVT 543
             T L+ +D++GC  L                  +  S CK             +RSL +
Sbjct: 749 GCTKLKFIDVQGCDNLDGFGDKLSYDPRTTCFNSLVLSGCKQLNASNLDFILVGMRSLTS 808

Query: 544 LILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLP 603
           L L  C NL   P+ +  +  LK +   R+ +  LP+S ENL  L  L+++ C KL +LP
Sbjct: 809 LELENCFNLRTLPDSIGLLSSLKLLKLSRSNVESLPASIENLVKLRRLYLDHCMKLVSLP 868

Query: 604 DNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
           +   SL    ++L+A +  S + +   L N+   L     +GLE  P++  L
Sbjct: 869 ELPESL----WLLSAVNCASLVTNFTQL-NIPFQLK----QGLEDLPQSVFL 911



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 160/398 (40%), Gaps = 80/398 (20%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           + +L    +NL  L+ + +  C  L  +PD   +       L+   ++ Q+  S+     
Sbjct: 626 LQKLWDGVQNLVNLKDIDLRYCENLVEVPDLSKATNLEDLSLSQCKSLRQVHPSILSLPK 685

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLS-SLEILYLSGNNF 693
           L+SLD   C  ++S      + L ++  L +S+ +     +E + +S  L  L+L G + 
Sbjct: 686 LQSLDLEGCIEIQSLQSD--VHLESLQDLRLSNCSSL---KEFSVMSVELRRLWLDGTHI 740

Query: 694 ESLPAIIKQMSQLRFI------HLEDFNMLQSLPELPLCLKYLHLIDCKMLQS-----LP 742
           + LPA I   ++L+FI      +L+ F    S      C   L L  CK L +     + 
Sbjct: 741 QELPASIWGCTKLKFIDVQGCDNLDGFGDKLSYDPRTTCFNSLVLSGCKQLNASNLDFIL 800

Query: 743 VLPFCLESLDLTGCNMLRSLPEL--PLCLQYLNLEDCNMLRSLP---ELPLCLQLLTVRN 797
           V    L SL+L  C  LR+LP+    L    L     + + SLP   E  + L+ L + +
Sbjct: 801 VGMRSLTSLELENCFNLRTLPDSIGLLSSLKLLKLSRSNVESLPASIENLVKLRRLYLDH 860

Query: 798 CNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANN 857
           C +L SLPE+                   P+  W   ++  A++   FT           
Sbjct: 861 CMKLVSLPEL-------------------PESLWLLSAVNCASLVTNFT----------- 890

Query: 858 KILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICI 917
                             +L     + + L +L  S + LPG  +P+ FS  + G+S+ I
Sbjct: 891 ------------------QLNIPFQLKQGLEDLPQS-VFLPGDHVPERFSFHAEGASVTI 931

Query: 918 QLPPHSSCRNLI-GFAFCAVLD-----SKKVDSDCFRY 949
              PH    +L+ G  FC  L       K V  DCF Y
Sbjct: 932 ---PHLPLSDLLCGLIFCVFLSQSPPHGKYVYVDCFIY 966


>gi|359493343|ref|XP_002277693.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1140

 Score =  353 bits (905), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 265/766 (34%), Positives = 393/766 (51%), Gaps = 127/766 (16%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V +VGIWGMGGIGKTTLA+ I+++   +FEG CF++ ++  S     +++L+ ++LS
Sbjct: 266 STKVLMVGIWGMGGIGKTTLARVIYERVLCQFEGYCFLAGLKSTS-----MDNLKAELLS 320

Query: 64  TTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
             L +K + +   +I    K R+   K+L+V+DDVN    L+ L+G  D FG  SR+++T
Sbjct: 321 KVLGDKNINMGLTSI----KARLHSKKVLVVIDDVNHQSMLETLVGGHDWFGPQSRVIIT 376

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TRDK +L   +G +  +Y V  LE + A + F  +AFK      D+      + SY +G 
Sbjct: 377 TRDKHLL-TVQGVDA-VYEVQKLEDDNAIQLFSYYAFKNKPPTRDVMKLLDQITSYAQGL 434

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L+VLG SLC +   +W   L+ L +I   EI ++   L+ISF+ L    K IFLDIA
Sbjct: 435 PLALKVLGCSLCDRNADYWTDKLNQLKKISNGEIQEV---LQISFDGLEDNEKEIFLDIA 491

Query: 243 CFFEGEDKDFVASILDD---SESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQE 298
           CFF G  + FV  IL+    S    ++ LIDKSL++I+  + L MHD+LQE+G QI+R+ 
Sbjct: 492 CFFRGRGQTFVKKILESCGFSMVSGIENLIDKSLITITQDDRLEMHDLLQEVGWQIIRKT 551

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
           S KEPG+RSRLW+ K++S +LK   G   +EGIF DLS ++ +N   +AF+ M+NLRL +
Sbjct: 552 SPKEPGRRSRLWEQKDVSHILKRETGAQEVEGIFFDLSGLEEMNFTTKAFSQMTNLRLLE 611

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
            Y     +        T  ++   K+ + +   +   +LRYLHWD YP  +LP +F+ +N
Sbjct: 612 IYRSNLRD--------TGGKMQ-CKLHVSDDFKFHYDELRYLHWDEYPCESLPFDFESEN 662

Query: 419 LVELNL-RCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
           LV   + R   + Q W+G+K                             NL FV     +
Sbjct: 663 LVHFCMPRSRHLTQLWKGQKVF--------------------------GNLEFV-----D 691

Query: 478 FSYCVNLIEFPQISGKVTRLYL----GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
            SY   L E P  S + T L +    G + + +V  S+  L+ L +L+L  C  L+ +  
Sbjct: 692 VSYSQYLKETPDFS-RATNLEVLVLKGCTNLRKVHPSLGYLSKLILLNLENCTNLEHLP- 749

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
           S   L SL TLIL GC  LE  PE+ + M +L ++  D T IT+                
Sbjct: 750 SIRWLVSLETLILSGCSKLEKLPEVPQHMPYLSKLCLDGTAITDFSG------------- 796

Query: 594 EDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF 653
              S+L N  +N G+L+ L  + +  S I QLPSS   S +LR    +H     S PR  
Sbjct: 797 --WSELGNFQENSGNLDCLNELNSDDSTIRQLPSS---SVVLR----NHNASPSSAPR-- 845

Query: 654 LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLED 713
                         +++R  P     L+SL  L LSG +   LP            +LE 
Sbjct: 846 ------------RSHSIR--PH--CTLTSLTYLNLSGTSIIRLP-----------WNLER 878

Query: 714 FNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNML 759
             MLQ           L L +C+ LQ+LPVLP  +E ++ + C  L
Sbjct: 879 LFMLQR----------LELTNCRRLQALPVLPSSIERMNASNCTSL 914



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 210/499 (42%), Gaps = 60/499 (12%)

Query: 563  EHLKRIYSDRTPITELPSSFE--NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAAS 620
            + L+ ++ D  P   LP  FE  NL    +      ++L       G+LE++   ++ + 
Sbjct: 639  DELRYLHWDEYPCESLPFDFESENLVHFCMPRSRHLTQLWKGQKVFGNLEFV--DVSYSQ 696

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
             + + P     +N L  L    C  L     + L  LS + LL++ +    E    I +L
Sbjct: 697  YLKETPDFSRATN-LEVLVLKGCTNLRKVHPS-LGYLSKLILLNLENCTNLEHLPSIRWL 754

Query: 681  SSLEILYLSG-NNFESLPAIIKQMSQLRFIHLE-----DFNMLQSLPELPL------CLK 728
             SLE L LSG +  E LP + + M  L  + L+     DF+    L           CL 
Sbjct: 755  VSLETLILSGCSKLEKLPEVPQHMPYLSKLCLDGTAITDFSGWSELGNFQENSGNLDCLN 814

Query: 729  YLHLIDCKMLQSLPVLPFCLESLDLTGCNM-LRSLPELPLC----LQYLNLEDCNMLRSL 783
             L+  D  + Q LP     L + + +  +   RS    P C    L YLNL   +++R L
Sbjct: 815  ELNSDDSTIRQ-LPSSSVVLRNHNASPSSAPRRSHSIRPHCTLTSLTYLNLSGTSIIR-L 872

Query: 784  P---ELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAA 840
            P   E    LQ L + NC RLQ+LP +   ++ ++AS    L   SP      +S+    
Sbjct: 873  PWNLERLFMLQRLELTNCRRLQALPVLPSSIERMNASNCTSLELVSP------QSVFKRF 926

Query: 841  ICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEM---AINEKLSELRGSLIVL 897
              F F NC KL    ++K+  D      H+   + R  Y      +    S       V 
Sbjct: 927  GGFLFGNCFKLR-NCHSKMEHDVQSVASHVVPGAWRSTYASWHPNVGIPFS------TVF 979

Query: 898  PGSEIPDWFSNQSSGSSICIQLPPHSSCR-NLIGFAFCAVLDSKKVDSDCFRYFYVSFQF 956
            PGSEIPDWF + S G  I I++PP      N +GFA  AV+ + + DS  + Y Y     
Sbjct: 980  PGSEIPDWFRHHSQGHEINIEVPPDWYINSNFLGFALSAVM-APQHDSRAW-YMYC---- 1033

Query: 957  DLEIKTLSETKHVDLGYNSRYIEDL----IDSDRVILGFKPCLNVGFPDGYHHTIATFKF 1012
            DL+   L+   H    +   +   L    I+SD V L + P       + + H     KF
Sbjct: 1034 DLDTHDLNSNSHRICSFFGSWTYQLQHTPIESDHVWLAYVPSFLSFSCEKWSH----IKF 1089

Query: 1013 -FAERKFYKIKRCGLCPVY 1030
             F+      +K CG CPVY
Sbjct: 1090 SFSSSGGCVVKSCGFCPVY 1108


>gi|356557333|ref|XP_003546971.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1158

 Score =  353 bits (905), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 269/747 (36%), Positives = 395/747 (52%), Gaps = 95/747 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPN-I 77
           KTT+A A++++   E+EG CF++++   SE  G + +++ +++S  L E  L++  PN +
Sbjct: 224 KTTIAAAVYNRLYFEYEGCCFMANITEESEKHGMI-YVKNKIISILLKENDLQIGTPNGV 282

Query: 78  PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
           P + K R+ R K+L+VLDD+N+  QL+ L+G LD FG GSRI+VTTRDK VL K   +  
Sbjct: 283 PPYVKRRLIRKKVLVVLDDINDSEQLENLVGALDWFGSGSRIIVTTRDKGVLGK---KAD 339

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNW--HSRSVVSYTKGNPLVLEVLGSSLCL 195
            +Y    L  +EA + F   AFK++ C E + W   SR V+ Y  GNPL L+VLGS L  
Sbjct: 340 IVYEAKALNSDEAIKLFMLNAFKQS-CLE-MEWIELSRRVIQYANGNPLALKVLGSFLYG 397

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           K +  W   L  L ++ + +I ++   L++++++L    K+IFL IACFF+G +   +  
Sbjct: 398 KSQIEWESQLQKLKKMPQVKIQNV---LRLTYDRLDREEKNIFLYIACFFKGYEVRRIIY 454

Query: 256 ILDD---SESDVLDILIDKSLV---SISG-NFLNMHDILQEMGRQIVRQESEKEPGKRSR 308
           +LD    S    L +L DK+L+     SG + ++MHD++QEMG +IVR+E  ++PGKR+R
Sbjct: 455 LLDACGFSTIIGLRVLKDKALIIEAKGSGISIVSMHDLIQEMGWEIVREECIEDPGKRTR 514

Query: 309 LWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIE 368
           LWDP +I  VLK+N GT AI+ I  ++SK   + L P+ F  M  L+   F         
Sbjct: 515 LWDPNDIHLVLKNNTGTKAIKSITFNVSKFDEVCLSPQIFERMQQLKFLNF--------- 565

Query: 369 KLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSK 428
                  +EQ+ Y    LP GL+ LP  LR  HW +YPL++LP +F  +NLVEL L  S+
Sbjct: 566 --TQHYGDEQILY----LPKGLESLPNDLRLFHWVSYPLKSLPLSFCAENLVELKLPWSR 619

Query: 429 VEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP 488
           VE+ W+G        IQN ++L  +     ++L   P           +FS   NL E  
Sbjct: 620 VEKLWDG--------IQNLEHLKKIDLSYSKNLLELP-----------DFSKASNLEEVE 660

Query: 489 QISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG 548
             S K  R          V  SI  L  L  L+L  CK L  + +    LRSL  L L G
Sbjct: 661 LYSCKNLR---------NVHPSILSLKKLVRLNLFYCKALTSLRSD-SHLRSLRDLFLGG 710

Query: 549 CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGS 608
           C  L+ F    E M   K +    T I ELPSS  +L  LE L ++ C  L NLP+ + +
Sbjct: 711 CSRLKEFSVTSENM---KDLILTSTAINELPSSIGSLRKLETLTLDHCKSLSNLPNKVAN 767

Query: 609 LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL-GLSAMGLLHISD 667
           L                         LR L    C  L++     L+ GL ++  L + +
Sbjct: 768 LR-----------------------SLRRLHIYGCTQLDASNLHILVNGLKSLETLKLEE 804

Query: 668 -YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC 726
              + EIP  I  LSSL  L L G + ES+ A IK +S+L  + L D   L SLPELP  
Sbjct: 805 CRNLFEIPDNINLLSSLRELLLKGTDIESVSASIKHLSKLEKLDLSDCRRLYSLPELPQS 864

Query: 727 LKYLHLIDCKMLQSLPVLPFCLESLDL 753
           +K L+ I+C    SL  + F L ++++
Sbjct: 865 IKELYAINC---SSLETVMFTLSAVEM 888



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 171/663 (25%), Positives = 279/663 (42%), Gaps = 104/663 (15%)

Query: 465  PSNLHFVC----------PVTINFSYCVNLIEFPQISGKVTRL-------YLGQSAIEEV 507
            P+++H V            +T N S    +   PQI  ++ +L       + G   I  +
Sbjct: 518  PNDIHLVLKNNTGTKAIKSITFNVSKFDEVCLSPQIFERMQQLKFLNFTQHYGDEQILYL 577

Query: 508  PSSIECL-TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLK 566
            P  +E L  DL +        LK +  SFC   +LV L L     +E   + ++ +EHLK
Sbjct: 578  PKGLESLPNDLRLFHWVSYP-LKSLPLSFCA-ENLVELKLPWS-RVEKLWDGIQNLEHLK 634

Query: 567  RI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQ 624
            +I  S    + ELP  F     LE + +  C  L N+  +I SL+ L  + L    A++ 
Sbjct: 635  KIDLSYSKNLLELPD-FSKASNLEEVELYSCKNLRNVHPSILSLKKLVRLNLFYCKALTS 693

Query: 625  LPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLE 684
            L S   L + LR L    C  L+ F  T       M  L ++  A+ E+P  I  L  LE
Sbjct: 694  LRSDSHLRS-LRDLFLGGCSRLKEFSVTS----ENMKDLILTSTAINELPSSIGSLRKLE 748

Query: 685  ILYLSG-NNFESLPAIIKQMSQLRFIHLE-----DFNMLQSLPELPLCLKYLHLIDCKML 738
             L L    +  +LP  +  +  LR +H+      D + L  L      L+ L L +C+ L
Sbjct: 749  TLTLDHCKSLSNLPNKVANLRSLRRLHIYGCTQLDASNLHILVNGLKSLETLKLEECRNL 808

Query: 739  QSLP--------VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCL 790
              +P        +    L+  D+   +   S+  L   L+ L+L DC  L SLPELP  +
Sbjct: 809  FEIPDNINLLSSLRELLLKGTDIESVSA--SIKHLSK-LEKLDLSDCRRLYSLPELPQSI 865

Query: 791  QLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLK 850
            + L   NC+ L++              V+  LS        A E L +  +   F NC+K
Sbjct: 866  KELYAINCSSLET--------------VMFTLS--------AVEMLHAYKLHTTFQNCVK 903

Query: 851  LNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSL-IVLPGSEIPDWFSNQ 909
            L+  + + I  ++ + I+ +A       +       +  L G +  + PGSE+P+WF  +
Sbjct: 904  LDQHSLSAIGVNAYVNIKKVAYDQ----FSTIGTNSIKFLGGPVDFIYPGSEVPEWFVYR 959

Query: 910  SSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHV 969
            ++ +S+ + L     C  ++GF FC ++D  +  S+   Y       +  +       H+
Sbjct: 960  TTQASVTVDLSSSVPCSKIMGFIFCVIVD--QFTSNDKNYIGCDCYMETGVGERVTRGHM 1017

Query: 970  DLGYNSRYIEDLIDSDRVILGF--KPCLNVG---------FPDGYHHTIATFKFFA---- 1014
            D  ++S +  +   SD V L +  K CL                Y+  I +F+FFA    
Sbjct: 1018 D-NWSSIHACEFF-SDHVCLWYDEKCCLKNQECESESMEELMASYNPKI-SFEFFAKTGS 1074

Query: 1015 ---ERKFYKIKRCGLCPVYANPSETKDNTF-TINFATEVWKLDDLPSASGTLDVEELELS 1070
               +R    IK CG+CP+Y       DN F  +    E+     L S +  +  +E  LS
Sbjct: 1075 IWEKRSDIIIKGCGVCPIYDTEC---DNFFKQMELELEI----TLQSMATKMSSKEATLS 1127

Query: 1071 PKR 1073
            PK+
Sbjct: 1128 PKQ 1130


>gi|227438125|gb|ACP30552.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1346

 Score =  352 bits (903), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 344/1178 (29%), Positives = 532/1178 (45%), Gaps = 212/1178 (17%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +DS D V++VGI G  GIGK+ +A+A+F   S +F    FVS  R   +  G     ++Q
Sbjct: 40   LDSED-VRMVGIVGPSGIGKSIIARALFSHLSSQFHYKAFVSYKRTIQDDYGMKLRWEEQ 98

Query: 61   MLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             LS  LS+K EV   ++    ++R++  K+LIVLDDV++V  LK L+G+   FG GSRIV
Sbjct: 99   FLSEILSQK-EVKLFHLGA-VEQRLKHKKVLIVLDDVDDVELLKTLVGQTGWFGLGSRIV 156

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            V T+DK++L   + +   +Y V+      A + FC  +F +N  P+     +  V +   
Sbjct: 157  VITKDKQLLRLHKID--LVYEVDYPSENLALQMFCRCSFGQNSPPDGFMKLAVEVANLAG 214

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
              PL L VLGSSL  K K  W ++L  L    + +I      L++S+++L  + + +FL 
Sbjct: 215  NLPLGLNVLGSSLRGKDKEEWMELLPRLRDGLDGKIEKT---LRVSYDELECKDQEVFLY 271

Query: 241  IACFFEGEDKDFVASILDDSESDVLDILIDKSLVSI--SGNFLNMHDILQEMGRQIVRQE 298
            IAC   GE  D++ ++L DS    L IL DKSL+ I  S   +NMH +LQ++G++IVR E
Sbjct: 272  IACLLNGEKVDYIKNLLGDSVGMGLRILADKSLIRITPSRRTVNMHSLLQKLGKEIVRAE 331

Query: 299  SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSNLRLF 357
            S   PGKR  L D K+I  VL  N GT+ + G++ + S++ + + ++  +F  M NL   
Sbjct: 332  SIYNPGKRRFLVDSKDICEVLAENLGTENVLGMYFNTSELEEALFVNEESFKGMRNLTFL 391

Query: 358  KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
            K Y       ++    S E +L      LP G  YLP+KLR L+WD YPL  +  NF+ +
Sbjct: 392  KVY-------KEWSRESGEGRLC-----LPRGYVYLPRKLRLLYWDEYPLTFMHFNFRAE 439

Query: 418  NLVELNLRCSKVEQPWEGEK----------------------------------AC---- 439
             LV+L +  SK+E+ W+G +                                   C    
Sbjct: 440  ILVKLTMENSKLEKLWDGVQPLRSLKKIRLDGSTKLKEIPDLSNAINLEKLNLWGCTSLM 499

Query: 440  -VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLY 498
             +PSSI+N   L  +S +GC  + + P+N++  C   +N   C  L  FPQIS  ++ L 
Sbjct: 500  TLPSSIKNLNKLRKVSMEGCTKIEALPTNINLGCLDYLNLGGCSRLRRFPQISQNISGLI 559

Query: 499  LGQSAIEEVPSS-IECLTDLEVLDLRGC---------------------KRLKRISTSFC 536
            L  ++I++  SS +E +  L  LD  GC                       L ++     
Sbjct: 560  LDGTSIDDEESSYLENIYGLTKLDWNGCSMRSMPLDFRSENLVYLTMRGSTLVKLWDGVQ 619

Query: 537  KLRSLVTLILLGCLNLEHFPEILEK--MEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
             L +LV L L GC NL  FP++ E   ++HL+   +D   +  LPSS +NL  L  L ++
Sbjct: 620  SLGNLVRLDLSGCENLNFFPDLSEATTLDHLE--LNDCKSLVVLPSSIQNLKKLTRLEMQ 677

Query: 595  DCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKG--LESFPR 651
             C+KL  LP ++ +LE L Y+ L   S +   P       + R++   +  G  +E    
Sbjct: 678  GCTKLKVLPTDV-NLESLKYLDLIGCSNLKSFP------RISRNVSELYLNGTAIEEDKD 730

Query: 652  TFLLG-LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIH 710
             F +G +  +  L  S  +++ +P       SL    + G+  E L   I+ +  LR I 
Sbjct: 731  CFFIGNMHGLTELVWSYCSMKYLPSSFC-AESLVKFSVPGSKLEKLWEGIQSLGSLRTID 789

Query: 711  LEDFNMLQSLPELPLC--LKYLHLIDCKMLQSLPVLPFCLE---SLDLTGCNMLRSLP-- 763
            L     L+ +P+L     L+YL L DCK L  LP     L+    L + GC  L  LP  
Sbjct: 790  LSGCQSLKEIPDLSTATSLEYLDLTDCKSLVMLPSSIRNLKKLVDLKMEGCTGLEVLPND 849

Query: 764  -ELPLCLQYLNLEDCNMLRSLPELPLC-----------------------LQLLTVRNCN 799
              L    QY NL  C+ LRS P++                          L  LT+R C 
Sbjct: 850  VNLVSLNQYFNLSGCSRLRSFPQISTSIVYLHLDYTAIEEVPSWIENISGLSTLTMRGCK 909

Query: 800  RLQSLPEILLCLQEL----------------DASVLEKLSK-HSPDLQWAPESLKSAAI- 841
            +L+ +      L+ L                DASV+   ++ H P  + A   L  + I 
Sbjct: 910  KLKKVASNSFKLKSLLDIDFSSCEGVRTFSDDASVVTSNNEAHQPVTEEATFHLGHSTIS 969

Query: 842  -------------------CFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMA 882
                               C +F NC  L+  A   IL                 G++ A
Sbjct: 970  AKNRASLRSVSPSFFNPMSCLKFQNCFNLDQDARKLILQS---------------GFKHA 1014

Query: 883  INEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKV 942
                         VLPG E+  +F +Q+ G+S+ I L   S     + F  C +L+    
Sbjct: 1015 -------------VLPGKEVHPYFRDQACGTSLTISLHESSLSLQFLQFKACILLEP-PT 1060

Query: 943  DSDCFRY--FYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGF- 999
                +RY    V + F  E    +    VDL  N  ++        V+  F+ CL     
Sbjct: 1061 GYPSYRYACIGVWWYFRGERNIHNVCIDVDL-CNVAHL--------VVFHFEVCLPKEVN 1111

Query: 1000 --PDGYHHTIATFKFFAERKFYKIKRCGLCPVYANPSE 1035
              P    +    F+F ++ + ++IK CG+  +  +PSE
Sbjct: 1112 CHPSELDYNDMVFEFESKSE-HRIKGCGVRLINVSPSE 1148


>gi|359477823|ref|XP_002282797.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1400

 Score =  352 bits (903), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 252/714 (35%), Positives = 361/714 (50%), Gaps = 119/714 (16%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK---LEVAGPN 76
           KTT+AKAI+++ S +++G  F+ ++R  S+  G +  LQ+++L   L  K   +      
Sbjct: 230 KTTIAKAIYNETSDQYDGRSFLRNIRERSK--GDILQLQQELLHGILRGKNFKINNVDEG 287

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           I    K  +   ++L++ DDV+E+ QL+ L  E D F   S I++TTRDK VL ++  + 
Sbjct: 288 IS-MIKRCLTSNRVLVIFDDVDELKQLEYLAEEKDWFHAKSTIIITTRDKHVLAQYGADI 346

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
              Y V+ L  EEA E F  +AFK+N   E     S +++ Y  G PL L+V+G+SL  K
Sbjct: 347 P--YEVSKLNKEEATELFSLWAFKQNRPQEVYKNLSYNIIDYANGLPLALKVIGASLFGK 404

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
           + SHW   L  L  I   EIH++   L+ISF+ L    K +FLD+ACFF+G+DKDFV+ I
Sbjct: 405 KISHWESALCKLKIIPHKEIHNV---LRISFDGLDDIDKGMFLDVACFFKGDDKDFVSRI 461

Query: 257 LDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
           L      V+  L D+ L++IS N L+MHD++Q MG +++RQE  ++PG+RSRLWD     
Sbjct: 462 LGPHAEHVITTLADRCLITISKNMLDMHDLIQLMGWEVIRQECPEDPGRRSRLWDSNAY- 520

Query: 317 RVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTE 376
            VL  N GT AIEG+FLD  K     L  ++F  M+ LRL K + P+     KL      
Sbjct: 521 HVLIGNTGTRAIEGLFLDRCKFNLSQLTTKSFKEMNRLRLLKIHNPR----RKL------ 570

Query: 377 EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE 436
               + +  LP   ++   +L YLHWD YPL +LP NF  KNLVEL LR S ++Q W G 
Sbjct: 571 ----FLEDHLPRDFEFSSYELTYLHWDRYPLESLPLNFHAKNLVELLLRNSNIKQLWRGN 626

Query: 437 KACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR 496
           K                              LH    V I+ SY V+LI  P  S     
Sbjct: 627 K------------------------------LHDKLRV-IDLSYSVHLIRIPDFSS---- 651

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
                     VP+ +E LT LE   + GC  L+R+     K + L TL   GC  LE FP
Sbjct: 652 ----------VPN-LEILT-LEGCTMHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFP 699

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
           EI   M  L+ +    T I +LPSS  +L GL+ L +++C+KL  +P +I  L       
Sbjct: 700 EIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHL------- 752

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE 676
                           + L  LD  HC  +E                         IP +
Sbjct: 753 ----------------SSLEVLDLGHCNIMEG-----------------------GIPSD 773

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
           I +LSSL+ L L   +F S+P  I Q+S+L  ++L   + L+ +PELP  L+ L
Sbjct: 774 ICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIPELPSRLRLL 827



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/280 (35%), Positives = 139/280 (49%), Gaps = 4/280 (1%)

Query: 447  FKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC-VNLIEFPQISGKVTRLYLGQSAIE 505
            F Y   +    C     +  +LH   P+T       V +    Q  G   +   G S + 
Sbjct: 1049 FNYEKTMEVNRCGFHLIYSEDLHQSHPLTTQTKGADVRICNECQCDGARRKRCFGCSDMT 1108

Query: 506  EVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHL 565
            EVP  IE   +L+ L L GCK L  + +  C  +SL TL   GC  LE FP+IL+ ME L
Sbjct: 1109 EVPI-IENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPDILQDMESL 1167

Query: 566  KRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQ 624
            + +Y D T I E+PSS E L GL+   + +C  L NLPD+I +L  L  + +       +
Sbjct: 1168 RNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCPNFRK 1227

Query: 625  LPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLE 684
            LP ++     L  L   H   + +F    L GL ++  L +    +REIP EI  LSSLE
Sbjct: 1228 LPDNLGRLQSLLQLSVGHLDSM-NFQLPSLSGLCSLRTLMLHACNIREIPSEIFSLSSLE 1286

Query: 685  ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
             L L+GN+F  +P  I Q+  L F+ L    MLQ +PELP
Sbjct: 1287 RLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELP 1326



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 101/233 (43%), Gaps = 33/233 (14%)

Query: 429  VEQPWEGEKACV---------PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
            +E P E ++ C+         PS I NFK L+ L   GC  L SFP  L           
Sbjct: 1113 IENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPDIL----------- 1161

Query: 480  YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
                     Q    +  LYL  +AI+E+PSSIE L  L+   L  C  L  +  S C L 
Sbjct: 1162 ---------QDMESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLT 1212

Query: 540  SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPIT--ELPSSFENLPGLEVLFVEDCS 597
            SL  L +  C N    P+ L +++ L ++          +LP S   L  L  L +  C+
Sbjct: 1213 SLRKLRVERCPNFRKLPDNLGRLQSLLQLSVGHLDSMNFQLP-SLSGLCSLRTLMLHACN 1271

Query: 598  KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
             +  +P  I SL  L  +  A +  S++P  ++    L  LD SHCK L+  P
Sbjct: 1272 -IREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHIP 1323



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 138/342 (40%), Gaps = 49/342 (14%)

Query: 458  CQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDL 517
            C S  + P   H  C +T N S  ++ +   + + +V R        E++  S    T  
Sbjct: 1022 CYSKAAIPEMFH-PCQLTENMSLFLDPVFNYEKTMEVNRCGFHLIYSEDLHQSHPLTTQT 1080

Query: 518  EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
            +  D+R C          C+          GC ++   P I   +E  +        +T 
Sbjct: 1081 KGADVRICNE--------CQCDGARRKRCFGCSDMTEVPIIENPLELDRLCLLGCKNLTS 1132

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
            LPS   N   L  L    CS+L++ PD +  +E L  +    +AI ++PSS+        
Sbjct: 1133 LPSGICNFKSLATLCCSGCSQLESFPDILQDMESLRNLYLDGTAIKEIPSSI-------- 1184

Query: 638  LDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESL 696
                  +GL+ F  T  + L               +P  I  L+SL  L +    NF  L
Sbjct: 1185 ---ERLRGLQHFTLTNCINLV-------------NLPDSICNLTSLRKLRVERCPNFRKL 1228

Query: 697  P---AIIKQMSQLRFIHLEDFNMLQSLPELP-LC-LKYLHLIDCKMLQSLPVLPFCLESL 751
            P     ++ + QL   HL+  N    LP L  LC L+ L L  C  ++ +P   F L SL
Sbjct: 1229 PDNLGRLQSLLQLSVGHLDSMNF--QLPSLSGLCSLRTLMLHACN-IREIPSEIFSLSSL 1285

Query: 752  D---LTGCNMLRSLPE---LPLCLQYLNLEDCNMLRSLPELP 787
            +   L G N    +P+       L +L+L  C ML+ +PELP
Sbjct: 1286 ERLCLAG-NHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELP 1326



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 42/293 (14%)

Query: 577 ELPSSFENLPGLEVLFVE-DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
            LP  FE     E+ ++  D   L++LP N  + + L  +L   S I QL     L + L
Sbjct: 575 HLPRDFE-FSSYELTYLHWDRYPLESLPLNFHA-KNLVELLLRNSNIKQLWRGNKLHDKL 632

Query: 636 RSLDSSHCKGL------ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS 689
           R +D S+   L       S P   +L L    +    +  +  +P+ I     L+ L  +
Sbjct: 633 RVIDLSYSVHLIRIPDFSSVPNLEILTLEGCTMHGCVN--LERLPRGIYKWKHLQTLSCN 690

Query: 690 G-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH------LIDCKMLQSLP 742
           G +  E  P I   M +LR + L       ++ +LP  + +L+      L +C  L  +P
Sbjct: 691 GCSKLERFPEIKGNMRELRVLDLSG----TAIMDLPSSITHLNGLQTLLLQECAKLHKIP 746

Query: 743 VLPFC----LESLDLTGCNMLRSLPELPLC----LQYLNLEDCNMLRSLP----ELPLCL 790
           +   C    LE LDL  CN++       +C    LQ LNLE      S+P    +L   L
Sbjct: 747 I-HICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLER-GHFSSIPTTINQLSR-L 803

Query: 791 QLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICF 843
           ++L + +C+ L+ +PE+   L+ LDA    + S  +P L      L S   CF
Sbjct: 804 EVLNLSHCSNLEQIPELPSRLRLLDAHGSNRTSSRAPFL-----PLHSLVNCF 851


>gi|451798980|gb|AGF69188.1| TMV resistance protein N-like protein 2 [Vitis labrusca]
          Length = 1386

 Score =  352 bits (902), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 252/714 (35%), Positives = 361/714 (50%), Gaps = 119/714 (16%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK---LEVAGPN 76
           KTT+AKAI+++ S +++G  F+ ++R  S+  G +  LQ+++L   L  K   +      
Sbjct: 216 KTTIAKAIYNETSDQYDGRSFLRNIRERSK--GDILQLQQELLHGILRGKNFKINNVDEG 273

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           I    K  +   ++L++ DDV+E+ QL+ L  E D F   S I++TTRDK VL ++  + 
Sbjct: 274 IS-MIKRCLTSNRVLVIFDDVDELKQLEYLAEEKDWFHAKSTIIITTRDKHVLAQYGADI 332

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
              Y V+ L  EEA E F  +AFK+N   E     S +++ Y  G PL L+V+G+SL  K
Sbjct: 333 P--YEVSKLNKEEATELFSLWAFKQNRPQEVYKNLSYNIIDYANGLPLALKVIGASLFGK 390

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
           + SHW   L  L  I   EIH++   L+ISF+ L    K +FLD+ACFF+G+DKDFV+ I
Sbjct: 391 KISHWESALCKLKIIPHKEIHNV---LRISFDGLDDIDKGMFLDVACFFKGDDKDFVSRI 447

Query: 257 LDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
           L      V+  L D+ L++IS N L+MHD++Q MG +++RQE  ++PG+RSRLWD     
Sbjct: 448 LGPHAEHVITTLADRCLITISKNMLDMHDLIQLMGWEVIRQECPEDPGRRSRLWDSNAY- 506

Query: 317 RVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTE 376
            VL  N GT AIEG+FLD  K     L  ++F  M+ LRL K + P+     KL      
Sbjct: 507 HVLIGNTGTRAIEGLFLDRCKFNLSQLTTKSFKEMNRLRLLKIHNPR----RKL------ 556

Query: 377 EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE 436
               + +  LP   ++   +L YLHWD YPL +LP NF  KNLVEL LR S ++Q W G 
Sbjct: 557 ----FLEDHLPRDFEFSSYELTYLHWDRYPLESLPLNFHAKNLVELLLRNSNIKQLWRGN 612

Query: 437 KACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR 496
           K                              LH    V I+ SY V+LI  P  S     
Sbjct: 613 K------------------------------LHDKLRV-IDLSYSVHLIRIPDFSS---- 637

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
                     VP+ +E LT LE   + GC  L+R+     K + L TL   GC  LE FP
Sbjct: 638 ----------VPN-LEILT-LEGCTMHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFP 685

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
           EI   M  L+ +    T I +LPSS  +L GL+ L +++C+KL  +P +I  L       
Sbjct: 686 EIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHL------- 738

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE 676
                           + L  LD  HC  +E                         IP +
Sbjct: 739 ----------------SSLEVLDLGHCNIMEG-----------------------GIPSD 759

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
           I +LSSL+ L L   +F S+P  I Q+S+L  ++L   + L+ +PELP  L+ L
Sbjct: 760 ICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIPELPSRLRLL 813



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 100/280 (35%), Positives = 139/280 (49%), Gaps = 4/280 (1%)

Query: 447  FKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC-VNLIEFPQISGKVTRLYLGQSAIE 505
            F Y   +    C     +  +LH   P+T       V +    Q  G   +   G S + 
Sbjct: 1035 FNYEKTMEVNRCGFHLIYSEDLHQSHPLTTQTKGADVRICNECQCDGARRKRCFGCSDMT 1094

Query: 506  EVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHL 565
            EVP  IE   +L+ L L GCK L  + +  C  +SL TL   GC  LE FP+IL+ ME L
Sbjct: 1095 EVPI-IENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPDILQDMESL 1153

Query: 566  KRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQ 624
            + +Y D T I E+PSS E L GL+   + +C  L NLPD+I +L  L  + +       +
Sbjct: 1154 RNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCPNFRK 1213

Query: 625  LPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLE 684
            LP ++     L  L   H   + +F    L GL ++  L +    +REIP EI  LSSLE
Sbjct: 1214 LPDNLGRLQSLLQLSVGHLDSM-NFQLPSLSGLCSLRTLMLHACNIREIPSEIFSLSSLE 1272

Query: 685  ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
             L L+GN+F  +P  I Q+  L F+ L    MLQ +PELP
Sbjct: 1273 RLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELP 1312



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 101/233 (43%), Gaps = 33/233 (14%)

Query: 429  VEQPWEGEKACV---------PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
            +E P E ++ C+         PS I NFK L+ L   GC  L SFP  L           
Sbjct: 1099 IENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPDIL----------- 1147

Query: 480  YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
                     Q    +  LYL  +AI+E+PSSIE L  L+   L  C  L  +  S C L 
Sbjct: 1148 ---------QDMESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLT 1198

Query: 540  SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPIT--ELPSSFENLPGLEVLFVEDCS 597
            SL  L +  C N    P+ L +++ L ++          +LP S   L  L  L +  C+
Sbjct: 1199 SLRKLRVERCPNFRKLPDNLGRLQSLLQLSVGHLDSMNFQLP-SLSGLCSLRTLMLHACN 1257

Query: 598  KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
             +  +P  I SL  L  +  A +  S++P  ++    L  LD SHCK L+  P
Sbjct: 1258 -IREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHIP 1309



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 138/342 (40%), Gaps = 49/342 (14%)

Query: 458  CQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDL 517
            C S  + P   H  C +T N S  ++ +   + + +V R        E++  S    T  
Sbjct: 1008 CYSKAAIPEMFH-PCQLTENMSLFLDPVFNYEKTMEVNRCGFHLIYSEDLHQSHPLTTQT 1066

Query: 518  EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
            +  D+R C          C+          GC ++   P I   +E  +        +T 
Sbjct: 1067 KGADVRICNE--------CQCDGARRKRCFGCSDMTEVPIIENPLELDRLCLLGCKNLTS 1118

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
            LPS   N   L  L    CS+L++ PD +  +E L  +    +AI ++PSS+        
Sbjct: 1119 LPSGICNFKSLATLCCSGCSQLESFPDILQDMESLRNLYLDGTAIKEIPSSI-------- 1170

Query: 638  LDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESL 696
                  +GL+ F  T  + L               +P  I  L+SL  L +    NF  L
Sbjct: 1171 ---ERLRGLQHFTLTNCINLV-------------NLPDSICNLTSLRKLRVERCPNFRKL 1214

Query: 697  P---AIIKQMSQLRFIHLEDFNMLQSLPELP-LC-LKYLHLIDCKMLQSLPVLPFCLESL 751
            P     ++ + QL   HL+  N    LP L  LC L+ L L  C  ++ +P   F L SL
Sbjct: 1215 PDNLGRLQSLLQLSVGHLDSMNF--QLPSLSGLCSLRTLMLHACN-IREIPSEIFSLSSL 1271

Query: 752  D---LTGCNMLRSLPE---LPLCLQYLNLEDCNMLRSLPELP 787
            +   L G N    +P+       L +L+L  C ML+ +PELP
Sbjct: 1272 ERLCLAG-NHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELP 1312



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 42/293 (14%)

Query: 577 ELPSSFENLPGLEVLFVE-DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
            LP  FE     E+ ++  D   L++LP N  + + L  +L   S I QL     L + L
Sbjct: 561 HLPRDFE-FSSYELTYLHWDRYPLESLPLNFHA-KNLVELLLRNSNIKQLWRGNKLHDKL 618

Query: 636 RSLDSSHCKGL------ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS 689
           R +D S+   L       S P   +L L    +    +  +  +P+ I     L+ L  +
Sbjct: 619 RVIDLSYSVHLIRIPDFSSVPNLEILTLEGCTMHGCVN--LERLPRGIYKWKHLQTLSCN 676

Query: 690 G-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH------LIDCKMLQSLP 742
           G +  E  P I   M +LR + L    ++    +LP  + +L+      L +C  L  +P
Sbjct: 677 GCSKLERFPEIKGNMRELRVLDLSGTAIM----DLPSSITHLNGLQTLLLQECAKLHKIP 732

Query: 743 VLPFC----LESLDLTGCNMLRSLPELPLC----LQYLNLEDCNMLRSLP----ELPLCL 790
           +   C    LE LDL  CN++       +C    LQ LNLE      S+P    +L   L
Sbjct: 733 I-HICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLER-GHFSSIPTTINQLSR-L 789

Query: 791 QLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICF 843
           ++L + +C+ L+ +PE+   L+ LDA    + S  +P L      L S   CF
Sbjct: 790 EVLNLSHCSNLEQIPELPSRLRLLDAHGSNRTSSRAPFL-----PLHSLVNCF 837


>gi|297791369|ref|XP_002863569.1| hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297309404|gb|EFH39828.1| hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1177

 Score =  352 bits (902), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 293/941 (31%), Positives = 469/941 (49%), Gaps = 143/941 (15%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVR------GNSETAGGLEHLQ 58
            + V+++GIWG  GIGKTT+++ ++++  H+F+    + +++       + E +  L+ LQ
Sbjct: 232  EEVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRPCHDEYSAKLQ-LQ 290

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            K++LS  +++K  V    +PH    +ER++  K+L+VLDDV+ + QL  +  ++  FG G
Sbjct: 291  KELLSQMINQKDMV----VPHLGVAQERLKDRKVLLVLDDVDALVQLDAMAKDVRWFGLG 346

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SRI+V T+D ++L K  G  K IY+V+    +EA E FC +AF +          +R+V 
Sbjct: 347  SRIIVVTQDLKLL-KAHGI-KYIYKVDFPTSDEALEIFCMYAFGQKSPKVGFEQIARTVT 404

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            +     PL L V+GS L    K  W +    + R+  S   DI  +LK S+N L    K 
Sbjct: 405  TLAGKLPLGLRVMGSYLRRMSKQEWAR---SIPRLRTSLDDDIESVLKFSYNSLAEEEKD 461

Query: 237  IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQ 293
            +FL IACFF  E  + +   L +   DV   L IL DKSL+S++   + MH++L ++G  
Sbjct: 462  LFLHIACFFRRERIETLEVFLANKFGDVKQGLQILADKSLLSLNFGNIEMHNLLVQLGLD 521

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK-IKG-INLDPRAFTNM 351
            I+R++S  +PGKR  L D ++I  VL  + GT  + GI L+LS  I+G IN+  RAF  M
Sbjct: 522  IIRKQSIHKPGKRQFLVDAEDICEVLTEDTGTRTLVGIDLELSGVIEGVINISERAFERM 581

Query: 352  SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
             NL+  +F+ P       +             + LP GL  + +KLR LHW+ YPL  LP
Sbjct: 582  CNLQFLRFHHPYGDRCHDI-------------LYLPQGLSNISRKLRLLHWERYPLTCLP 628

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
            S F P+ LV++N+R S +E+ WEG +      I+N K++  LSF  C +L+  P      
Sbjct: 629  SKFNPEFLVKINMRDSMLEKLWEGNEP-----IRNLKWMD-LSF--CVNLKELPDFSTAT 680

Query: 472  CPVTINFSYCVNLIEFPQISGKVTRL----YLGQSAIEEVPSSIECLTDLEVLDLRGCKR 527
                +    C++L+E P   G VT L     +G S++ ++PSSI  LT+L+ L L  C  
Sbjct: 681  NLQELRLVDCLSLVELPSSIGNVTNLLELDLIGCSSLVKLPSSIGNLTNLKKLYLNRCSS 740

Query: 528  LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR-TPITELPSSFENLP 586
            L ++ +S   + SL  L L GC +L   P  +    +LK++Y+D  + + ELPSS  N+ 
Sbjct: 741  LVQLPSSIGNVTSLKELNLSGCSSLLEIPSSIGNTTNLKKLYADGCSSLVELPSSVGNIA 800

Query: 587  GLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKG 645
             L  L + +CS L   P +I  L  L  + L+  S++ +LPS   + N L++L  S C  
Sbjct: 801  NLRELQLMNCSSLIEFPSSILKLTRLKDLNLSGCSSLVKLPSIGNVIN-LQTLFLSGCSS 859

Query: 646  LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMS 704
            L                         E+P  I   ++L+ LYL+G ++   LP+ I  ++
Sbjct: 860  LV------------------------ELPFSIENATNLQTLYLNGCSDLLELPSSIWNIT 895

Query: 705  QLRFIHLEDFNMLQSLPEL---PLCLKYLHLIDCKMLQSLPVLPF---CLESLDLTGCNM 758
             L+ ++L   + L+ LP L    + L+ L L++C  +  LP   +    L  LD++ C+ 
Sbjct: 896  NLQSLYLNGCSSLKELPSLVGNAINLQSLSLMNCSSMVELPSSIWNATNLSYLDVSSCSS 955

Query: 759  LRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASV 818
            L  L         L L  C  L S P +P  L +L   +C   +SL E L C        
Sbjct: 956  LVGLN------IKLELNQCRKLVSHPVVPDSL-ILDAGDC---ESLVERLDC-------- 997

Query: 819  LEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLG 878
                            S ++  I   F NC KLN +A + I+  S  R            
Sbjct: 998  ----------------SFQNPKIVLNFANCFKLNQEARDLIIQTSTCRN----------- 1030

Query: 879  YEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
                             +LPG ++P +F+ +++G S+ ++L
Sbjct: 1031 ----------------AILPGGKVPAYFTYRATGDSLTVKL 1055


>gi|359495250|ref|XP_002271616.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1427

 Score =  351 bits (901), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 328/1091 (30%), Positives = 489/1091 (44%), Gaps = 200/1091 (18%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            DS D + +VGI+G GGIGKTT+AK ++++  ++F  + F+ DVR  +        LQ+Q+
Sbjct: 211  DSHD-ISVVGIYGTGGIGKTTIAKIVYNEIQYQFTSASFLQDVR-ETFNKRCQLQLQQQL 268

Query: 62   LSTTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            L  T+ +  E    N      K R+   K+LIV+DDV+E+ QL+ + G    FG GS I+
Sbjct: 269  LHDTVGDDEEFRNINKGIDIIKARLSSKKVLIVIDDVDELEQLESVAGSPKWFGPGSTII 328

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            +TTR++ +L ++  E    Y   GL + EA + F   AFK+N   ED    S  +V Y +
Sbjct: 329  ITTRNRHLLVEY--EATISYEATGLHYREALQLFSRHAFKQNDPKEDYVDLSNCMVQYAQ 386

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            G PL L+VLGSSL       W   L+ L      +I+D+   L+IS + L    K +FLD
Sbjct: 387  GLPLALKVLGSSLRGMTIEQWESALNKLKTNLNKKINDV---LRISLDGLDYSQKEVFLD 443

Query: 241  IACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
            IACFF+GE +DFV+ IL D + D    +  L D+ LV+I  N + MHD++QEMG  IVR+
Sbjct: 444  IACFFKGECEDFVSRILYDCKLDPKINIKNLHDRCLVTIRDNVIQMHDLIQEMGYAIVRE 503

Query: 298  ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
            E  ++P K SRLWD  +I       +G + I+ I LDLS+ K I       T        
Sbjct: 504  ECPRDPHKWSRLWDADDIYNAFSRREGMENIQTISLDLSRSKEIQFSTEVCT-------- 555

Query: 358  KFYVPKFYEIEKLPSMSTEEQL------SYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
                     +  LPS    EQL      S +  +L  G   L K       ++  L  +P
Sbjct: 556  ---------LRSLPSSFCGEQLIEINLKSSNIKRLWKGNKRLEKLKGIDLSNSKQLVKMP 606

Query: 412  SNFKPKNLVELNLR-CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
                  NL  LNL  C+ + +        + SSI + K L+ L+ +GC+ L+SFP+N+ F
Sbjct: 607  EFSSMPNLERLNLEGCTSLCE--------LHSSIGDLKQLTYLNLRGCEQLQSFPTNMKF 658

Query: 471  VCPVTINFSYCVNLIEFPQI---SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDL----- 522
                 +  + C  L + P+I    G + +L L  S I+E+P SI  L  LE+LDL     
Sbjct: 659  ESLEVLCLNQCRKLKKIPKILGNMGHLKKLCLNGSGIKELPDSIGYLESLEILDLSNCSK 718

Query: 523  ------------------------------------------RGCKRLKRISTSFCKLRS 540
                                                      R C + ++ S  F  +R 
Sbjct: 719  FEKFPEIRGNMKCLKRLSLDETAIKELPNSIGSLTSLELLSLRKCSKFEKFSDVFTNMRR 778

Query: 541  LVTLIL-----------LGCL------------NLEHFPEILEKMEHLKRIYSDRTPITE 577
            L+ L L           +GCL              E FPEI   M+ LKR+  D T I E
Sbjct: 779  LLILNLRESGIKELPGSIGCLEFLLQLDLSYCSKFEKFPEIRGNMKRLKRLSLDETAIKE 838

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
            LP+S  ++  LE+L +  CSK +   D   ++ +L  +    S I +LP S+     L  
Sbjct: 839  LPNSIGSVTSLEILSLRKCSKFEKFSDVFTNMRHLQILNLRESGIKELPGSIGCLESLLQ 898

Query: 638  LDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESL 696
            LD S+C   E F       +  + +L++    ++E+P  I  L  LEIL L G +N E L
Sbjct: 899  LDLSNCSKFEKFSE-IQWNMKFLRVLYLKHTTIKELPNSIGCLQDLEILDLDGCSNLERL 957

Query: 697  PAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY------LHLIDCKMLQSLPVLPFC--- 747
            P I K M  LR + L       ++  LP  ++Y      L L +C+ L+SLP    C   
Sbjct: 958  PEIQKDMGNLRALSLAG----TAIKGLPCSIRYFTGLHHLTLENCRNLRSLP--DICGLK 1011

Query: 748  -LESLDLTGCNMLRS--------------------LPELPLCLQYLN------LEDCNML 780
             L+ L + GC+ L +                    + ELP  +++L       L +C  L
Sbjct: 1012 SLKGLFIIGCSNLEAFSEITEDMEQLKRLLLRETGITELPSSIEHLRGLDSLELINCKNL 1071

Query: 781  RSLP---ELPLCLQLLTVRNCNRLQSLPEILLCLQ----ELDASVLEKLSKHSPDLQWAP 833
             +LP       CL +L VRNC +L +LP+ L  L+    +LD      +    P   W  
Sbjct: 1072 VALPISIGSLTCLTILRVRNCTKLHNLPDNLRGLRRRLIKLDLGGCNLMEGEIPSDLWCL 1131

Query: 834  ESLKSAAICFEFTNC-------------LKLNGKANNKILADSLLRIRHMAI-------- 872
             SL+S  +      C             L +N     K + +    + +M          
Sbjct: 1132 SSLESLYVSENHIRCIPAGITQLFKLKTLNMNHCPMLKEIGELPSSLTYMEARGCPCLET 1191

Query: 873  --------ASLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLPPH- 922
                    +SL   ++ AI       R    V+PGS  IP+W S+Q  G  + I+LP + 
Sbjct: 1192 ETFSSPLWSSLLKYFKSAIQSTFFGPRR--FVIPGSSGIPEWVSHQRIGCEVRIELPMNW 1249

Query: 923  SSCRNLIGFAF 933
                N +GF  
Sbjct: 1250 YEDNNFLGFVL 1260


>gi|358343944|ref|XP_003636055.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355501990|gb|AES83193.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1250

 Score =  351 bits (901), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 258/751 (34%), Positives = 390/751 (51%), Gaps = 107/751 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  VQI+G+WGMGGIGKTTLA A+F + S +++GSCF   V   S++ G + +   ++LS
Sbjct: 216 STEVQIIGVWGMGGIGKTTLATAMFQRVSFKYDGSCFFEKVTEVSKSRG-INYTCNKLLS 274

Query: 64  TTLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF-GQGSRIVV 121
             L E L++  P  I    + R++ MK  IVLDDV+    L+ LIG    + G GS ++V
Sbjct: 275 KLLKEDLDIDTPKLISSMIRRRLKSMKSFIVLDDVHNSELLQNLIGVGHGWLGSGSTVIV 334

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRDK VL    G  K IY V  +    +   FC  AF +    +     S+  + Y +G
Sbjct: 335 TTRDKHVL--ISGGIKTIYEVKKMNSRNSLRLFCLNAFNKVSPKDGYVELSKRAIDYARG 392

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
           NPL L+VLGS L  K +  W      L +I  +EI  I+   ++SFN+L    ++IFLDI
Sbjct: 393 NPLALQVLGSLLSCKNEKEWDCASAKLRKIPNNEIDSIF---RLSFNELDKTEQNIFLDI 449

Query: 242 ACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQ 297
           A  F+G++++ +  IL++    +D+ +  L+DK+LV++ S N + MH ++QEMG+QIVR+
Sbjct: 450 AFVFKGQERNSITKILNECGFFADIGISRLLDKALVTVDSENCIQMHGLIQEMGKQIVRE 509

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
           ES K PG+RSRL DP+E+  VLK+N+G++ +E I+LD ++   +NL P AF NM NLRL 
Sbjct: 510 ESLKNPGQRSRLCDPEEVYDVLKNNRGSEKVEAIYLDATESIHVNLRPDAFENMENLRLL 569

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
            F                +++   + ++ P+GL  LPK LR+L WD YPL+T+P     +
Sbjct: 570 AF----------------QDREGVTSIRFPHGLGLLPKNLRFLRWDGYPLKTVPLTSSLE 613

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
            LVEL+L+ S VE+ W G        + N   L  +   G +                  
Sbjct: 614 MLVELSLKQSHVEKLWNG--------VVNLPNLEIIDLNGSK------------------ 647

Query: 478 FSYCVNLIEFPQISG--KVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
                 LIE P +SG   +  + L +  ++ EV SSI  L  LE L++ GC  LK +S++
Sbjct: 648 -----KLIECPNVSGSPNLKEVILRECESMPEVDSSIFHLQKLERLNVCGCTSLKSLSSN 702

Query: 535 FCK--LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE--V 590
            C   LR   ++    C+NL+ F   L  + HL  +Y++     ELPSS  +   L+   
Sbjct: 703 TCSPALRHFSSVY---CINLKEFSVPLTSV-HLHGLYTEWYG-NELPSSILHAQNLKNFG 757

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
             + DC  L +LP+N     YL  IL++  A   +                         
Sbjct: 758 FSISDC--LVDLPENFCDSFYLIKILSSGPAFRTVKE----------------------- 792

Query: 651 RTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIH 710
                      L+ +    + EIP  I+ LSSL IL L     +SLP  +K + QLR +H
Sbjct: 793 -----------LIIVEIPILYEIPDSISLLSSLVILRLLCMAIKSLPESLKYLPQLRLVH 841

Query: 711 LEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           +    +LQS+P L   +  L + DC+ L+ +
Sbjct: 842 VSKCKLLQSIPALYRFIPNLSVWDCESLEEV 872



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 144/629 (22%), Positives = 242/629 (38%), Gaps = 141/629 (22%)

Query: 441  PSSIQNFKYLSALSFK---GCQSLRSFPSNLHFVCPVTINF----SYCVNLIEFPQISGK 493
            P + +N + L  L+F+   G  S+R FP  L  + P  + F     Y +  +        
Sbjct: 557  PDAFENMENLRLLAFQDREGVTSIR-FPHGLGLL-PKNLRFLRWDGYPLKTVPLTSSLEM 614

Query: 494  VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
            +  L L QS +E++ + +  L +LE++DL G K+L                  + C N+ 
Sbjct: 615  LVELSLKQSHVEKLWNGVVNLPNLEIIDLNGSKKL------------------IECPNVS 656

Query: 554  HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
              P + E       I  +   + E+ SS  +L  LE L V  C+ L +L  N        
Sbjct: 657  GSPNLKEV------ILRECESMPEVDSSIFHLQKLERLNVCGCTSLKSLSSN-------- 702

Query: 614  YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
                              S  LR   S +C  L+ F    L  +   GL   +++   E+
Sbjct: 703  ----------------TCSPALRHFSSVYCINLKEFS-VPLTSVHLHGLY--TEWYGNEL 743

Query: 674  PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL--CLKYLH 731
            P  I +  +L+    S         I   +  L     + F +++ L   P    +K L 
Sbjct: 744  PSSILHAQNLKNFGFS---------ISDCLVDLPENFCDSFYLIKILSSGPAFRTVKELI 794

Query: 732  LIDCKMLQSLPVLPFCLESLDLTG--CNMLRSLPE----LPLCLQYLNLEDCNMLRSLPE 785
            +++  +L  +P     L SL +    C  ++SLPE    LP  L+ +++  C +L+S+P 
Sbjct: 795  IVEIPILYEIPDSISLLSSLVILRLLCMAIKSLPESLKYLPQ-LRLVHVSKCKLLQSIPA 853

Query: 786  LPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEF 845
            L   +  L+V +C   +SL E+L    EL            P L +              
Sbjct: 854  LYRFIPNLSVWDC---ESLEEVLSSTGEL---------YDKPSLYY----------IVVL 891

Query: 846  TNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDW 905
             NC  L+  +   +L D++++I   A    R   E     K   +   L  +PG E  +W
Sbjct: 892  INCQNLDTHSYQTVLKDAMVQIELEA----RENSENEYGHK-DIIFNFLPAMPGME--NW 944

Query: 906  FSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSD------CF-------RYFYV 952
            F   S+   + ++LP      NL+GFA+  VL   ++ SD      C+       R +  
Sbjct: 945  FHYSSTEVCVTLELPS-----NLLGFAYYLVLSQGRIRSDIGFGYECYLDNSSGERIWKK 999

Query: 953  SFQFDLEIKTLSE--------TKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYH 1004
             F+    I+  S         + H+ L Y+    + ++D+   I       N  +     
Sbjct: 1000 CFKMPDLIQYPSWNGTSVHMISDHLVLWYDPESCKQIMDAVEQIKVITDVNNTSYDPKL- 1058

Query: 1005 HTIATFKFFAERKFY---KIKRCGLCPVY 1030
                TF FF     Y   +IK CG   +Y
Sbjct: 1059 ----TFTFFINETLYDEVEIKECGFHWIY 1083


>gi|224127726|ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870943|gb|EEF08074.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1203

 Score =  350 bits (898), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 305/962 (31%), Positives = 448/962 (46%), Gaps = 159/962 (16%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKL-EVAGP--N 76
            K+T+A+ ++D+   EFEGSCF+++VR   E  G +  LQKQ+LS  L EK  ++  P   
Sbjct: 235  KSTIARVVYDKIRCEFEGSCFLANVREGFEKHGAVP-LQKQLLSEILREKSPKIWDPEKG 293

Query: 77   IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
            I    K R++  K+L++LDDV+ + QL  L  +   F  GSRI++T+RDK +L     + 
Sbjct: 294  IAEI-KNRLQNRKVLVILDDVDNLKQLHFLAVDWKWFLPGSRIIITSRDKNLLSTHAVD- 351

Query: 137  KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH-SRSVVSYTKGNPLVLEVLGSSLCL 195
              IY    L  ++A       AFK++  P +  W   +SV+ + +G PL   VL SSLC 
Sbjct: 352  -GIYEAEELNDDDALVLLSRKAFKKDQ-PIEGYWELCKSVLGHARGLPLAARVLASSLCG 409

Query: 196  KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
            +    W   +  LN I      D+  +LK+SF+ L    K +FLDIACFF+G +KD V  
Sbjct: 410  RSMDFWESFIKRLNEIPN---RDVMAVLKLSFDGLEELEKKLFLDIACFFKGMNKDQVTR 466

Query: 256  ILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
            IL+         + IL DKSL+ +S + L+MHD+LQ MGR++VRQES  EPG+RSRLW  
Sbjct: 467  ILNQCGFHANYGIQILQDKSLICVSNDTLSMHDLLQAMGREVVRQESTAEPGRRSRLWAS 526

Query: 313  KEISRVLKHNKGTDAIEGIFLD----------LSKIKGINLDPRAFTNMSNLRLFKFYVP 362
            K++  VL  N GT+ IE I LD          + K K    +   F+ MS LRL +    
Sbjct: 527  KDVFHVLGKNTGTEEIESIALDWANPEDVEGTMQKTKRSAWNTGVFSKMSRLRLLRIRNA 586

Query: 363  KFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
             F                       +G +YL  +LR+L W  YP + LPS+F+P+NLVE+
Sbjct: 587  CF----------------------DSGPEYLSNELRFLEWRNYPSKYLPSSFQPENLVEV 624

Query: 423  NLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
            +L  S + Q   G K            L +L                      I+ SY  
Sbjct: 625  HLCYSNLRQLRLGNK-----------ILDSLK--------------------VIDLSYSE 653

Query: 483  NLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
             LI+ P  +G   + RL L G   + EV SSI     L  ++L  C+ L  + +    L 
Sbjct: 654  YLIKTPNFTGIPNLERLILQGCRRLSEVHSSIGHHNKLIYVNLMDCESLTSLPSRISGLN 713

Query: 540  SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
             L  L L GC  L+ FPEI    + L+++  D+T I ELP S + L GL  L ++DC KL
Sbjct: 714  LLEELHLSGCSKLKEFPEIEGNKKCLRKLCLDQTSIEELPPSIQYLVGLISLSLKDCKKL 773

Query: 600  DNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSA 659
              LP +I  L+                        L++L  S C  LE+ P  F   L  
Sbjct: 774  SCLPSSINGLK-----------------------SLKTLHLSGCSELENLPENFG-QLEC 809

Query: 660  MGLLHISDYAVREIPQEIAYLSSLEILYLSG---------NNFESLPAIIKQMSQLRFIH 710
            +  L +S  A+RE P  I  L +L+IL   G         N ++ L   +    +     
Sbjct: 810  LNELDVSGTAIREPPVSIFSLKNLKILSFHGCAESSRSTTNIWQRLMFPLMPGKRANSTS 869

Query: 711  LEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLP---ELPL 767
            L   ++        L L   +L +  +   +  L   L  L+L+  N   SLP   +   
Sbjct: 870  LVLPSLSGLSSLTRLGLSNCNLGEGAVPNDIGYLS-SLRQLNLSR-NKFVSLPTSIDQLS 927

Query: 768  CLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSP 827
             LQ+L +EDC ML+SLPELP  L+   V  C  L+ +                       
Sbjct: 928  GLQFLRMEDCKMLQSLPELPSNLEEFRVNGCTSLEKM----------------------- 964

Query: 828  DLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKL 887
              Q++ +  +   + + F NC +L+       +  +LLR       +L   +        
Sbjct: 965  --QFSRKLCQLNYLRYLFINCWRLSESDCWNNMFPTLLRKCFQGPPNLIESFS------- 1015

Query: 888  SELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRN-LIGFAFCAVLDSKKVDSDC 946
                   +++PGSEIP WFS+QS GSS+ +Q PPHS   +  +G+A CA L       + 
Sbjct: 1016 -------VIIPGSEIPTWFSHQSEGSSVSVQTPPHSHENDEWLGYAVCASLGYPDFPPNV 1068

Query: 947  FR 948
            FR
Sbjct: 1069 FR 1070


>gi|227438247|gb|ACP30613.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 950

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 242/652 (37%), Positives = 332/652 (50%), Gaps = 73/652 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V+ +GIWG  GIGKT +A+ IF + S ++E   F+ D+    E  G  + +++++LS
Sbjct: 300 SQDVRRIGIWGAVGIGKTAIAEEIFHRISVQYETCVFLKDLHKEVELKG-YDAVREELLS 358

Query: 64  TTLSEKLEV-AGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             L  + +V    NI   F + R++R   L+VLDDVN+   ++     L  FG  SR+++
Sbjct: 359 KLLEVEPDVIRTSNIKVSFLRSRLQRKSALVVLDDVNDFRDVETFAEMLSYFGPRSRVII 418

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           T+R++ V      +   +Y V  LEF  +        F+    PE     S  +V ++ G
Sbjct: 419 TSRNRHVF--ILSKTDYVYEVKPLEFPNSLHLLNPGIFQSGLSPELYKTLSLELVKFSNG 476

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
           NP VL+ L           W  +  ++ +   S I+ I  I + S   L    KSIFLDI
Sbjct: 477 NPQVLQFLSR--------EWKSLSKEIQK--SSAIY-IPGIFERSCCGLDENEKSIFLDI 525

Query: 242 ACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
           ACFF   DKD VA +LD    S       L+DKSL++IS N ++M   LQ  GR+IVRQE
Sbjct: 526 ACFFRKMDKDDVAMLLDGCGFSAHIGFKNLVDKSLLTISHNTVDMLWFLQATGREIVRQE 585

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
           S   PG RSRLW+ ++I  V   N GT  IEG+FLD+S++K  +  P  F  M NLRL K
Sbjct: 586 SIDRPGDRSRLWNAEDIRDVFLDNIGTSDIEGLFLDMSQLK-FDASPNVFDKMCNLRLLK 644

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
           FY  +  E                 V LP GL+YLP KLR LHW+ YP+ +LP  F PKN
Sbjct: 645 FYFSELIE--------------NHGVSLPQGLEYLPTKLRLLHWEYYPISSLPQCFDPKN 690

Query: 419 LVELNLRCSKVEQPWEGEKA---------------------------------------C 439
           L+ELN+  S V++ W+G+K+                                        
Sbjct: 691 LIELNMPNSCVKKLWKGKKSLENLKKMRLSYSSQLTKLPRLTSAQNLELLDLEGCKSLES 750

Query: 440 VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
           +  SI   K L +L+ K C +L S PS         +N S C  L  FP+IS  V  LYL
Sbjct: 751 ISHSICYLKKLVSLNLKDCSNLESVPSTSDLESLEVLNLSGCSKLENFPEISPNVKELYL 810

Query: 500 GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
           G + I E+PSSI+ L  LE LDL   + L  + TS CKL+ L TL L GC +LE+FP+  
Sbjct: 811 GGTMIREIPSSIKNLVLLEKLDLENSRHLVILPTSMCKLKHLETLNLSGCSSLEYFPDFS 870

Query: 560 EKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
            KM+ LK +   RT I ELPSS   L  LE +    C  L  LPDN  SL +
Sbjct: 871 RKMKCLKSLDLSRTAIRELPSSISYLIALEEVRFVGCKSLVRLPDNAWSLRF 922


>gi|224130518|ref|XP_002328629.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838611|gb|EEE76976.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1121

 Score =  349 bits (896), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 255/733 (34%), Positives = 380/733 (51%), Gaps = 90/733 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+A++++    FEGS F+++VR   E   GL  LQ+Q+LS TL ++          
Sbjct: 227 KTTIARAVYEKMLGHFEGSSFLANVR-EVEEKHGLVRLQEQLLSDTLMDRRTKISDVHRG 285

Query: 80  FTKERVR---RMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
             + RVR   RM +L+VLDDV+++ QL+ L+G+ + F  GSR+++TTRD+ +L++F  + 
Sbjct: 286 MNEIRVRLRSRM-VLVVLDDVDQLVQLESLVGDRNWFDNGSRVIITTRDELLLKQFGVD- 343

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
            KIYRV  L   EA + FC  AF+    PED    +  VV Y  G PL L VLGS     
Sbjct: 344 -KIYRVASLNNIEAVQLFCLKAFRSYCPPEDYVLQTIQVVKYADGLPLALHVLGSFFSGI 402

Query: 197 RKSH-WGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           R    W    H L R+ +     I D LKISF+ L    K IFLDIACFF G ++D V  
Sbjct: 403 RSVELWN---HSLKRLKDIPDKGILDKLKISFDGLNEVEKKIFLDIACFFNGWEEDCVTK 459

Query: 256 ILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           +++ S       + IL++K L++IS N + MHD+LQEMGRQIV++ES +EPGKR+RLW  
Sbjct: 460 LMESSGFYPQIGIRILVEKFLINISDNRVWMHDLLQEMGRQIVKRESHEEPGKRTRLWLC 519

Query: 313 KEISRVLKHNKGTDAIEGIFLDLS-KIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
           +++  VL +N GTD +EGI L+ + ++ G+ L   +   M  LR+ K             
Sbjct: 520 EDVIHVLLNNTGTDKVEGIVLNSNDEVDGLYLSAESIMKMKRLRILKL------------ 567

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
                       + L   + YL  +LRYL W  YP ++LPS F+P  LVEL++R S ++Q
Sbjct: 568 ----------QNINLSQEIKYLSNELRYLEWCRYPFKSLPSTFQPDKLVELHMRHSSIKQ 617

Query: 432 PWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS 491
            WEG        ++  K L A+  +  ++L   P          +N   C  L+      
Sbjct: 618 LWEG--------VRPLKLLRAIDLRHSRNLIKTPDFRQVPNLEKLNLEGCRKLV------ 663

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
                         ++  SI  L  L  L+L+ C +L  + T+ C+L++L  L L GC  
Sbjct: 664 --------------KIDDSIGILKGLVFLNLKDCVKLACLPTNICELKTLRILNLYGCFK 709

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
           LE  PE+L  + +L+ +   RT IT+LPS+F     L+VL  + C          G    
Sbjct: 710 LEKLPEMLGNVINLEELDVGRTAITQLPSTFGLWKKLKVLSFDGCK---------GPAPK 760

Query: 612 LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR 671
            +Y L +  ++ + P  + L     S   S  K          L LS   L+        
Sbjct: 761 SWYSLFSFRSLPRNPCPITLMLSSLSTLYSLTK----------LNLSNCNLME------G 804

Query: 672 EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
           E+P +++   SLE L L GNNF  +P+ I ++S+L+ + L +   LQSLP+LP  L+YL 
Sbjct: 805 ELPDDMSCFPSLEELDLIGNNFVRIPSSISRLSKLKSLRLGNCKKLQSLPDLPSRLEYLG 864

Query: 732 LIDCKMLQSLPVL 744
           +  C  L +LP L
Sbjct: 865 VDGCASLGTLPNL 877



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 164/402 (40%), Gaps = 75/402 (18%)

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDS 640
           F  +P LE L +E C KL  + D+IG L+ L ++ L     ++ LP+++     LR L+ 
Sbjct: 645 FRQVPNLEKLNLEGCRKLVKIDDSIGILKGLVFLNLKDCVKLACLPTNICELKTLRILNL 704

Query: 641 SHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAII 700
             C  LE  P   L  +  +  L +   A+ ++P        L++L   G      PA  
Sbjct: 705 YGCFKLEKLPE-MLGNVINLEELDVGRTAITQLPSTFGLWKKLKVLSFDGCKG---PAPK 760

Query: 701 KQMSQLRFIHLEDFNMLQSLPELPLCLKY-------------LHLIDCKMLQS-LPVLPF 746
              S   F         +SLP  P  +               L+L +C +++  LP    
Sbjct: 761 SWYSLFSF---------RSLPRNPCPITLMLSSLSTLYSLTKLNLSNCNLMEGELPDDMS 811

Query: 747 C---LESLDLTGCNMLR---SLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNR 800
           C   LE LDL G N +R   S+  L   L+ L L +C  L+SLP+LP  L+ L V  C  
Sbjct: 812 CFPSLEELDLIGNNFVRIPSSISRLSK-LKSLRLGNCKKLQSLPDLPSRLEYLGVDGCAS 870

Query: 801 LQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKIL 860
           L +LP +                          E  +S  +   F NC +L     N  +
Sbjct: 871 LGTLPNLF------------------------EECARSKFLSLIFMNCSELTDYQGNISM 906

Query: 861 ADSLLRIR-HMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
             + L+   H  + S   G+  +               PGSEIP WF ++S G S+ I+L
Sbjct: 907 GLTWLKYYLHFLLESGHQGHPAS---------WFFTCFPGSEIPSWFHHKSVGHSLTIRL 957

Query: 920 PP--HSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLE 959
            P  H S    +G A CA  +    + DC     ++  FD++
Sbjct: 958 LPYEHWSSSKWMGLAVCAFFE----ELDCGDSCLITLNFDIK 995


>gi|451798982|gb|AGF69189.1| TMV resistance protein N-like protein 3 [Vitis labrusca]
          Length = 1524

 Score =  349 bits (896), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 247/715 (34%), Positives = 368/715 (51%), Gaps = 120/715 (16%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKL-EVAGPNIP 78
           KTT+AKAI+++ SH+++GS F+ +++  S+  G +  LQ+++L   L  K  ++   N  
Sbjct: 225 KTTIAKAIYNEISHQYDGSSFLINIKERSK--GDILQLQQELLHGILRGKFFKINNVNEG 282

Query: 79  HFTKER-VRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
           +   +R +R  ++L++ DDV+E+ QL+ L  E D F   S I++T+RDK VL ++  +  
Sbjct: 283 NSMIKRCLRSNRVLVIFDDVDELKQLEYLAEEKDWFHAKSTIIITSRDKHVLAQYGVDIP 342

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
             Y V+ L  EEA E F  +AFK+N   E     S +++ Y  G PL L+VLG+SL  K+
Sbjct: 343 --YEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYNIIDYADGLPLALKVLGASLFGKK 400

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
            S+W   L  L  I   EIH++   L+ISF+ L    K IFLDIACFF+G+D+DFV+ IL
Sbjct: 401 ISNWESALCKLKIIPHMEIHNV---LRISFDGLDDIEKGIFLDIACFFKGDDRDFVSRIL 457

Query: 258 DDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISR 317
                  +  L D+ L+++S N L+MHD++Q+MG +I+RQE  ++PG+RSRLWD    + 
Sbjct: 458 GPHAEHAITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQECPEDPGRRSRLWDSN-AND 516

Query: 318 VLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEE 377
           VL  NKGT AIEG+FLD  K   + +   +F  M+ LRL   + P+            E+
Sbjct: 517 VLIRNKGTRAIEGLFLDRCKFNPLQITTESFKEMNRLRLLNIHNPR------------ED 564

Query: 378 QLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK 437
           QL + K  LP   ++   +L YLHWD YPL +LP NF  KNLV+L LR S ++Q W G K
Sbjct: 565 QL-FLKDHLPRDFEFSSYELTYLHWDGYPLESLPMNFHAKNLVQLVLRGSNIKQVWRGNK 623

Query: 438 ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL 497
                                         LH    V I+ SY  +LI  P  S      
Sbjct: 624 ------------------------------LHDKLRV-IDLSYSFHLIGIPDFSS----- 647

Query: 498 YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPE 557
                    VP       +LE+L L GC                    + GC+NLE  P 
Sbjct: 648 ---------VP-------NLEILILIGC-------------------TMHGCVNLELLPR 672

Query: 558 ILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILA 617
            + K++HL                       ++L    CSKL+  P+  G++  L  +  
Sbjct: 673 NIYKLKHL-----------------------QILSCNGCSKLERFPEIKGNMRKLRVLDL 709

Query: 618 AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE--IPQ 675
           + +AI  LPSS+   N L++L    C  L   P   +  LS++ +L +    + E  IP 
Sbjct: 710 SGTAIMDLPSSITHLNGLQTLLLQECSKLHKIP-IHICHLSSLEVLDLGHCNIMEGGIPS 768

Query: 676 EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
           +I +LSSL+ L L   +F S+P  I Q+S L  ++L   N L+ + ELP CL+ L
Sbjct: 769 DICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCNNLEQITELPSCLRLL 823



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 3/183 (1%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S + EVP  I    +L+ L LR CK L  + +S    +SL TL   GC  LE  PEIL+ 
Sbjct: 1097 SDMNEVPI-IGNPLELDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQD 1155

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL-YYILAAAS 620
            ME L+++    T I E+PSS + L GL+ L + +C  L NLP++I +L  L + I+ +  
Sbjct: 1156 MESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCP 1215

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
            +  +LP ++     L  L       + +F    L GL ++  L +    +REIP EI YL
Sbjct: 1216 SFKKLPDNLGRLQSLLHLSVGPLDSM-NFQLPSLSGLCSLRQLELQACNIREIPSEICYL 1274

Query: 681  SSL 683
            SSL
Sbjct: 1275 SSL 1277



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 162/389 (41%), Gaps = 77/389 (19%)

Query: 578 LPSSFENLPGLEVLFVE-DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
           LP  FE     E+ ++  D   L++LP N  + + L  ++   S I Q+     L + LR
Sbjct: 572 LPRDFE-FSSYELTYLHWDGYPLESLPMNFHA-KNLVQLVLRGSNIKQVWRGNKLHDKLR 629

Query: 637 SLD---SSHCKGLESFPRT------FLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
            +D   S H  G+  F          L+G +  G +++       +P+ I  L  L+IL 
Sbjct: 630 VIDLSYSFHLIGIPDFSSVPNLEILILIGCTMHGCVNL-----ELLPRNIYKLKHLQILS 684

Query: 688 LSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH------LIDCKMLQS 740
            +G +  E  P I   M +LR + L    ++    +LP  + +L+      L +C  L  
Sbjct: 685 CNGCSKLERFPEIKGNMRKLRVLDLSGTAIM----DLPSSITHLNGLQTLLLQECSKLHK 740

Query: 741 LPVLPFC----LESLDLTGCNMLRSLPELPLC----LQYLNLEDCNMLRSLPELP---LC 789
           +P+   C    LE LDL  CN++       +C    LQ LNLE      S+P        
Sbjct: 741 IPI-HICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLER-GHFSSIPTTINQLSS 798

Query: 790 LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCL 849
           L++L + +CN L+ + E+  CL+ LDA    + S  +P L      L S   CF +    
Sbjct: 799 LEVLNLSHCNNLEQITELPSCLRLLDAHGSNRTSSRAPFL-----PLHSLVNCFRWAQDW 853

Query: 850 KLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSN 908
           K                               +  +     +G+ IVLPGS+ IP+W  N
Sbjct: 854 K-----------------------------HTSFRDSSYHGKGTCIVLPGSDGIPEWILN 884

Query: 909 QSSGSSICIQLPPHSSCRN-LIGFAFCAV 936
           +    S  I+LP +    N  +GFA C V
Sbjct: 885 RGDNFSSVIELPQNWHQNNEFLGFAICCV 913



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 22/149 (14%)

Query: 440  VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
            +PSSI  FK L+ LS  GC  L S P                    E  Q    + +L L
Sbjct: 1125 LPSSIFGFKSLATLSCSGCSQLESIP--------------------EILQDMESLRKLSL 1164

Query: 500  GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
              +AI+E+PSSI+ L  L+ L L  CK L  +  S C L SL  LI+  C + +  P+ L
Sbjct: 1165 SGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNL 1224

Query: 560  EKMEHLKRIYSDRTPITELPSSFENLPGL 588
             +++ L  ++    P+  +     +L GL
Sbjct: 1225 GRLQSL--LHLSVGPLDSMNFQLPSLSGL 1251



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 137/352 (38%), Gaps = 54/352 (15%)

Query: 724  PLCLKYLHLIDCKMLQSLPVLPF---CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNML 780
            PL L  L L DCK L SLP   F    L +L  +GC+ L S+PE+        L+D   L
Sbjct: 1108 PLELDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEI--------LQDMESL 1159

Query: 781  RSLP-------ELPLC------LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSP 827
            R L        E+P        LQ L + NC  L +LPE +  L  L   ++E      P
Sbjct: 1160 RKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVES----CP 1215

Query: 828  DLQWAPESLKSAAICFEFT---------NCLKLNGKANNKILADSLLRIRHMA-----IA 873
              +  P++L         +             L+G  + + L      IR +      ++
Sbjct: 1216 SFKKLPDNLGRLQSLLHLSVGPLDSMNFQLPSLSGLCSLRQLELQACNIREIPSEICYLS 1275

Query: 874  SLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLP-PHSSCRNLIGFA 932
            SL   +  ++    +E  G         IP+W S+Q SG  I ++LP       + +GF 
Sbjct: 1276 SLGREFRRSVRTFFAESNG---------IPEWISHQKSGFKITMKLPWSWYENDDFLGFV 1326

Query: 933  FCAVLDSKKVDSDCFRYFYVSFQFD-LEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGF 991
             C++    ++++   R F     F       L +   ++      Y ED  +   ++   
Sbjct: 1327 LCSLYVPLEIETKTHRIFSCILNFGDDSDSFLFDDLRLEQICECCYYEDASNQGLLVYYS 1386

Query: 992  KPCLNVGFPDGYHHTI-ATFKFFAERKFYKIKRCGLCPVYANPSETKDNTFT 1042
            K  +   F      T+ A+F  +   K  K  RCG   +YA+  E  + T  
Sbjct: 1387 KSDIPEKFHSNEWRTLNASFNVYFGIKPVKAARCGFHFLYAHDYEQNNLTMV 1438



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 9/174 (5%)

Query: 597  SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
            S ++ +P     LE     L     ++ LPSS+     L +L  S C  LES P   L  
Sbjct: 1097 SDMNEVPIIGNPLELDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPE-ILQD 1155

Query: 657  LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFN 715
            + ++  L +S  A++EIP  I  L  L+ L LS   N  +LP  I  ++ L+F+ +E   
Sbjct: 1156 MESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCP 1215

Query: 716  MLQSLPE-LPLCLKYLHL----IDCKMLQSLPVLPFC-LESLDLTGCNMLRSLP 763
              + LP+ L      LHL    +D    Q   +   C L  L+L  CN +R +P
Sbjct: 1216 SFKKLPDNLGRLQSLLHLSVGPLDSMNFQLPSLSGLCSLRQLELQACN-IREIP 1268



 Score = 43.9 bits (102), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 14/153 (9%)

Query: 643  CKGLESFPRTFLLGLSAMGLLHISDYAVRE-IPQEIAYLSSLEILYLSGNNFESLPAIIK 701
            CK L S P + + G  ++  L  S  +  E IP+ +  + SL  L LSG   + +P+ I+
Sbjct: 1119 CKNLTSLPSS-IFGFKSLATLSCSGCSQLESIPEILQDMESLRKLSLSGTAIKEIPSSIQ 1177

Query: 702  QMSQLRFIHLEDFNMLQSLPELPLC----LKYLHLIDCKMLQSLPVLPFCLESLDLTGCN 757
            ++  L+++ L +   L +LPE  +C    LK+L +  C   + LP     L+SL      
Sbjct: 1178 RLRGLQYLLLSNCKNLVNLPE-SICNLTSLKFLIVESCPSFKKLPDNLGRLQSLLHLSVG 1236

Query: 758  MLRS----LPELP-LC-LQYLNLEDCNMLRSLP 784
             L S    LP L  LC L+ L L+ CN +R +P
Sbjct: 1237 PLDSMNFQLPSLSGLCSLRQLELQACN-IREIP 1268


>gi|357468503|ref|XP_003604536.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505591|gb|AES86733.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1088

 Score =  349 bits (895), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 253/663 (38%), Positives = 360/663 (54%), Gaps = 79/663 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ V++VGIWGMGGIGKTTLA+ +F Q   E+EG CF+ ++R  S    G+  L+++++S
Sbjct: 263 SEDVRVVGIWGMGGIGKTTLAEEVFHQLQSEYEGCCFLENIREES-AKHGMVFLKEKLIS 321

Query: 64  TTLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
             L E ++V   N +PH+ K R+RRMK+LIVLDDVN+  QL+ L G+ D FG GSRI++T
Sbjct: 322 ALLDEVVKVDIANRLPHYVKTRIRRMKVLIVLDDVNDFDQLEILFGDHDLFGFGSRIIIT 381

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TRDK++L K   +   I  V  L+++++ E F   AFK      + N  S+ VV+Y KG 
Sbjct: 382 TRDKQMLSK---DVDDILEVGALDYDKSLELFNLNAFKGKELEIEYNELSKRVVNYAKGI 438

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PLVL+VL   +  K K  W   L  L ++   ++    D++++S++ L    + IFLDIA
Sbjct: 439 PLVLKVLAHLVRGKDKLVWESQLDKLRKMPSKKVQ---DVMRLSYDDLDREEQKIFLDIA 495

Query: 243 CFFEGED--KDFVASILDDSESD-----VLDILIDKSLVSISG-NFLNMHDILQEMGRQI 294
           CFF G +   D++  +  DSESD      L+ L DK LVS+S  N ++MH I+Q+MGR+I
Sbjct: 496 CFFNGSNLKVDYLKLLWKDSESDNSVASGLERLKDKDLVSVSKHNVISMHGIIQDMGREI 555

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VRQES  +PG RSRLWD  +I  VLK++KGT+ I  I++ L  ++ + L P  F+ M NL
Sbjct: 556 VRQESSGDPGSRSRLWD-DDIYEVLKNDKGTEEIRSIWMPLPTLRNLKLSPSTFSKMRNL 614

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           +    YVP  Y+ +                 LP+GL  +P +LRYL W  YPL++LP  F
Sbjct: 615 QF--LYVPNVYDQDGFD-------------LLPHGLHSMPPELRYLCWMHYPLKSLPDEF 659

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             + LV L+L  S+VE+ W G        +QN   L  +     + L+  P         
Sbjct: 660 SAEKLVILDLSYSRVEKLWHG--------VQNLLNLKEVKLFYSRFLKQLP--------- 702

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
             +FS  +NL E   I       + GQ  +  V  SI  L +LE LDL  C  L  + TS
Sbjct: 703 --DFSKALNL-EVLDIH------FCGQ--LTSVHPSIFSLENLEKLDLSHCTALTEL-TS 750

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
                SL  L L  C N+  F    E M  L   Y   T I  LP+SF     LE+L + 
Sbjct: 751 DTHSSSLRYLSLKFCKNIRKFSVTSENMIELDLQY---TQINALPASFGRQTKLEILHLG 807

Query: 595 DCSKLDNLPD---NIGSLEYL--YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES- 648
           +CS ++  P    N+  L+YL   Y L   + + +LP S      L  L +  C  LES 
Sbjct: 808 NCS-IERFPSCFKNLIRLQYLDIRYCLKLQT-LPELPQS------LEVLHARGCTSLESV 859

Query: 649 -FP 650
            FP
Sbjct: 860 LFP 862



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 161/401 (40%), Gaps = 108/401 (26%)

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
           L H  + L  ++ +K  YS    + +LP  F     LEVL +  C +L ++  +I SLE 
Sbjct: 677 LWHGVQNLLNLKEVKLFYS--RFLKQLPD-FSKALNLEVLDIHFCGQLTSVHPSIFSLEN 733

Query: 612 LYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV 670
           L  + L+  +A+++L S    S+ LR L    CK +  F  T             S+  +
Sbjct: 734 LEKLDLSHCTALTELTSDTH-SSSLRYLSLKFCKNIRKFSVT-------------SENMI 779

Query: 671 REIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
                       L++ Y   N   +LPA   + ++L  +HL +     S+   P C K  
Sbjct: 780 E-----------LDLQYTQIN---ALPASFGRQTKLEILHLGNC----SIERFPSCFK-- 819

Query: 731 HLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCL 790
                                     N++R        LQYL++  C  L++LPELP  L
Sbjct: 820 --------------------------NLIR--------LQYLDIRYCLKLQTLPELPQSL 845

Query: 791 QLLTVRNCNRLQSL--PEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNC 848
           ++L  R C  L+S+  P I                         PE  K       F NC
Sbjct: 846 EVLHARGCTSLESVLFPSI-------------------------PEQFKENRYRVVFANC 880

Query: 849 LKLNGKANNKILADSLLRIRHMAIASLRL-GYEMAINEKLSELRG------SLIVLPGSE 901
           LKL+  +   I  ++  +I +M  A   +   E   + K ++ +       ++ V PG+ 
Sbjct: 881 LKLDEHSLANIAFNA--QINNMKFACQHVSALEHDFHNKFNDYKDHNDSYQAIYVYPGNS 938

Query: 902 IPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKV 942
           +P+WF   ++   + I L   +S   L+GF FC VL   ++
Sbjct: 939 VPEWFEYMTTTDYVVIDLSSSTSSSPLLGFIFCFVLGGNRL 979


>gi|357518219|ref|XP_003629398.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355523420|gb|AET03874.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1106

 Score =  348 bits (894), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 258/726 (35%), Positives = 367/726 (50%), Gaps = 93/726 (12%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           VQI+G+WGMGGIGKTTLA A+F + S ++EGSCF+ +V   S+  G +  +  ++LS  L
Sbjct: 212 VQIIGLWGMGGIGKTTLAAALFQRVSFKYEGSCFLENVTEVSKRHG-INFICNKLLSKLL 270

Query: 67  SEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF-GQGSRIVVTTR 124
            E L++     IP     R++RMK  IVLDDV+ +  L+ LIG  + + G GS ++VTTR
Sbjct: 271 REDLDIESAKVIPSMIMRRLKRMKSFIVLDDVHTLELLQNLIGVGNGWLGDGSIVIVTTR 330

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           DK VL    G   KI++V  +    + + F   AF +    E     S  V+ Y KGNPL
Sbjct: 331 DKHVL--VSGGIDKIHQVKEMNSRNSLQLFSFNAFDKVLPKEGYVELSERVIDYAKGNPL 388

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L+VLGS LC K +  W   L  L  I  +EI  I   ++ S+N+L  + K+IFLDIACF
Sbjct: 389 ALKVLGSFLCSKSEIEWNCALAKLKEIPNAEIDKI---MRWSYNELDDKEKNIFLDIACF 445

Query: 245 FEGEDKDFVASILDDSE--SDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESE 300
           F+G ++D + +IL+     +D+ +  L+DK+L+ +   N + MHD++QEMG+Q+VR+ES 
Sbjct: 446 FKGHERDRMTTILNQCGFFADIGIRTLLDKALIRVDFENCIQMHDLIQEMGKQVVREESL 505

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
           K P + SRLWDPKE+  VLK+N+ T  +E IFLD ++ + INL P+ F  M NLRL  F 
Sbjct: 506 KNPEQSSRLWDPKEVYDVLKNNRETKIVEAIFLDATESRHINLSPKTFEKMPNLRLLAF- 564

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                           +      V LP+GLD LPK LRY  WD YP ++LP  F P+ LV
Sbjct: 565 ---------------RDHKGIKSVSLPSGLDSLPKNLRYFLWDGYPSKSLPPTFCPEMLV 609

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
           E +L+ S VE  W GE         N   L  L     +                     
Sbjct: 610 EFSLQDSHVENLWNGE--------LNLPNLEILDLSNSKK-------------------- 641

Query: 481 CVNLIEFPQISGKVTRLYL---GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
              LIE P +SG +   Y+   G  ++ EV SSI  L  LE L + GC  LK IS++ C 
Sbjct: 642 ---LIECPNVSGSLNLKYVRLNGCLSLPEVDSSIFFLQKLESLIIDGCISLKSISSNTCS 698

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS 597
             +L  L  + C+NL+ F      +++L  +        + PSS  +   LE        
Sbjct: 699 -PALRELNAMNCINLQEFSVTFSSVDNL-FLSLPEFGANKFPSSILHTKNLEYFLSPISD 756

Query: 598 KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGL 657
            L +LP+N  +  +L     A S   +  SS+ L  +L S          S     L G 
Sbjct: 757 SLVDLPENFANCIWL-----ANSLKGERDSSIILHKILPS------PAFLSVKHLILFGN 805

Query: 658 SAMGLLHISD---------------YAVREIPQEIAYLSSLEILYLSGN---NFESLPAI 699
               L  I D                A+R +P+ I YL  LE L +      N ESL  +
Sbjct: 806 DVPFLSEIPDNISLLSSLKSLRLFNIAIRSLPETIMYLPQLESLSVFNCKMLNCESLEKV 865

Query: 700 IKQMSQ 705
           ++ MS+
Sbjct: 866 LRPMSE 871


>gi|51477388|gb|AAU04761.1| MRGH13 [Cucumis melo]
          Length = 1024

 Score =  348 bits (893), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 250/751 (33%), Positives = 392/751 (52%), Gaps = 103/751 (13%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V+ VGIWGMGGIGKTTLA+ I+   SH F+G  F+ +V+  +     +  LQ+++++ 
Sbjct: 235 DDVRFVGIWGMGGIGKTTLARIIYKSVSHLFDGCYFLDNVK-EALKKEDIASLQQKLITG 293

Query: 65  TLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
           TL ++ +++   +     K R+ ++K LI+LDDVN + QL++L G LD FG GSR++VTT
Sbjct: 294 TLMKRNIDIPNADGATLIKRRISKIKALIILDDVNHLSQLQKLAGGLDWFGSGSRVIVTT 353

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           RD+ +L    G E++ Y V  L+ EE  + F   AF E H  E+       VV+Y  G P
Sbjct: 354 RDEHLLIS-HGIERR-YNVEVLKIEEGLQLFSQKAFGEEHPKEEYFDLCSQVVNYAGGLP 411

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L +EVLGSSL  K    W   ++ + ++ E    +I + LKIS+  L    + IFLDIAC
Sbjct: 412 LAIEVLGSSLHNKPMEDW---INAVEKLWEVRDKEIIEKLKISYYMLEESEQKIFLDIAC 468

Query: 244 FFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
           FF+ + K+    IL+         L+IL +K L++   + L +HD++QEMG++IVR    
Sbjct: 469 FFKRKSKNQAIEILESFGFPAVLGLEILEEKCLITAPHDKLQIHDLIQEMGQEIVRHTFP 528

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
            EP KR+RLW  ++I+  L  ++GT+AIEGI +D  +    +L+ +AF++M+NLR+ K  
Sbjct: 529 NEPEKRTRLWLREDINLALSRDQGTEAIEGIMMDFDEEGESHLNAKAFSSMTNLRVLKL- 587

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                                + V L   ++YL  +LR+L+W  YPL+TLPSNF P NL+
Sbjct: 588 ---------------------NNVHLCEEIEYLSDQLRFLNWHGYPLKTLPSNFNPTNLL 626

Query: 421 ELNLRCSKVEQPWEGEK----------------------ACVPS---------------- 442
           EL L  S +   W   K                      + VP+                
Sbjct: 627 ELELPNSSIHLLWTTSKSMETLKVINLSDSQFLSKTPDFSVVPNLERLVLSGCVELHQLH 686

Query: 443 -SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT---RLY 498
            S+ N K+L  L  + C+ L + P N+       +  S C +L  FP+IS  +     L+
Sbjct: 687 HSLGNLKHLIQLDLRNCKKLTNIPFNICLESLKILVLSGCSSLTHFPKISSNMNYLLELH 746

Query: 499 LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
           L +++I+ + SSI  LT L VL+L+ C  L ++ ++   L SL TL L GC  L+  PE 
Sbjct: 747 LEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCSELDSLPES 806

Query: 559 LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
           L  +  L+++    T + + P SF+ L  LE+L   +C  L        S ++L+ +   
Sbjct: 807 LGNISSLEKLDITSTCVNQAPMSFQLLTKLEIL---NCQGL--------SRKFLHSLFPT 855

Query: 619 ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV--REIPQE 676
                         N  R   + + +GL+     F  G S + +L++SD  +   ++P +
Sbjct: 856 W-------------NFTRKF-TIYSQGLK-VTNWFTFGCS-LRILNLSDCNLWDGDLPND 899

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
           +  L+SL+IL+LS N+F  LP  I  +  LR
Sbjct: 900 LRSLASLQILHLSKNHFTKLPESICHLVNLR 930


>gi|147784070|emb|CAN72303.1| hypothetical protein VITISV_009715 [Vitis vinifera]
          Length = 1135

 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 261/751 (34%), Positives = 384/751 (51%), Gaps = 111/751 (14%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            SD   +VGIWGMGGIGKTTLA+AI+ + + +FE  CF  +V G      GL  LQ++ L
Sbjct: 207 GSDDFLMVGIWGMGGIGKTTLARAIYRKITCQFEACCFFENV-GEDLAKEGLIGLQQKFL 265

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
           +  L E      PN+       ++                  RL  + D FG+GSRI++T
Sbjct: 266 AQLLEE------PNLNMKAXTSIK-----------------GRLHSKKDWFGRGSRIIIT 302

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TRDK +L          Y      ++EA E    ++ K     +D    S+ V+ Y +G 
Sbjct: 303 TRDKXLL--ISHGVLNYYEAQRFNYDEAXEFLTPYSLKHKIPXDDFMEVSKEVIGYAQGL 360

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL LEVLGS L    K  W    + L+++  +    I ++LK+S++ L  + K+I LDIA
Sbjct: 361 PLALEVLGSFLFSMTKEEWR---NQLDKLKSTPNMKIQEVLKVSYDGLDDKEKNIXLDIA 417

Query: 243 CFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQE 298
           CFF+GEDKD+V  ILD         +  LIDKSLV+IS  N J MHD++QEMGR+IVRQ+
Sbjct: 418 CFFKGEDKDYVMEILDGCGFFSLSGIRALIDKSLVTISWSNEJMMHDLIQEMGREIVRQQ 477

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLF 357
           S  EPGKRSRLW  ++I+ VLK N  T+ IEGIFL+LS ++  +    +A   M+ LRL 
Sbjct: 478 SLXEPGKRSRLWFHEDINXVLKKNTATEKIEGIFLNLSHLEEMLYFTTQALARMNRLRLL 537

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
           K Y  K   I +  +      +   KV       +    LR L++  Y L++LP++F PK
Sbjct: 538 KVYNSK--NISR--NFKDTSNMENCKVNFSKDFKFCYHDLRCLYFYGYSLKSLPNDFNPK 593

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
           NL+EL++  S+++Q W+G              L+ L F                    ++
Sbjct: 594 NLIELSMPYSRIKQLWKG-----------IXVLANLKF--------------------MD 622

Query: 478 FSYCVNLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            S+   LIE P   G   + RL L G  ++ +V SS+  L +L  L+L+ C+ LK + +S
Sbjct: 623 LSHSKYLIETPNFRGVTNLKRLVLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSS 682

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
            C L+SL T IL GC   + FPE    +E LK +Y D   I  LPSSF  L  L++L  +
Sbjct: 683 TCDLKSLETFILSGCSKFKEFPENFGSLEMLKELYXDEIAIGVLPSSFSFLRNLQILSFK 742

Query: 595 DCSKLDNLPDNIGSLEYLYYILAAASAISQLP--SSVALSNMLRSLDSSHCKGLESFPRT 652
            C                      +S +  LP  SS ++ ++L+ L              
Sbjct: 743 GCK-------------------GPSSTLWLLPRRSSNSIGSILQPLS------------- 770

Query: 653 FLLGLSAMGLLHISDYAVREIPQ--EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIH 710
              GL ++  L++S+  + + P    + +LSSLE LYL GN+F +LP+ I Q+S L  + 
Sbjct: 771 ---GLRSLIRLNLSNCNLSDEPNLSSLGFLSSLEELYLGGNDFVTLPSTISQLSNLTLLG 827

Query: 711 LEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           LE+   LQ LPELP  + Y+   +C  L+ +
Sbjct: 828 LENCKRLQVLPELPSSIYYICAENCTSLKDV 858


>gi|87241451|gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 265/797 (33%), Positives = 390/797 (48%), Gaps = 120/797 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ ++  GIWGMGGIGKTTLAK I+ +  ++F+ SCF+ +VR  S    GL  LQ+++LS
Sbjct: 74  SEEIRFEGIWGMGGIGKTTLAKHIYKKIHNQFDVSCFLENVRELSSERDGLLCLQRKLLS 133

Query: 64  TTLSEKLEVAGPNIPHFT--KERVRRM----KLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
                 L+++   I      KE +R +    K+L+VLDD++   QL+ L G+   FG GS
Sbjct: 134 -----HLKISSMRIESLDQGKEIIRNLLFNKKVLLVLDDLSSDIQLENLAGK-QWFGPGS 187

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           R+++TTRDK +L      E  IY    L   E+ + F   AF+     E     S+  V 
Sbjct: 188 RVIITTRDKHLLVSLSVCE--IYDAQILNSHESLQLFSQKAFRSGKPEEGFVELSKQAVQ 245

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
              G PL L+VLGS LC ++ S W   L  L +  +   +DIY  L+IS++ L    K+I
Sbjct: 246 CAGGIPLALKVLGSFLCGRKASVWEDALKMLQQDLQ---NDIYKTLRISYDGLRDMEKAI 302

Query: 238 FLDIACFFEGEDKDFVASILDDSESDVL---DILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FLDIACFF+G  KD V  IL++   + L   D+LI+KSL++  G  L MHD+LQEMGR I
Sbjct: 303 FLDIACFFKGSRKDHVTQILENCGLNPLIGIDVLIEKSLITYDGWHLGMHDLLQEMGRNI 362

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V  ES  + GK+SRLW  K+I +VL++NKGT++ + + L+LS+    + +P AF  M NL
Sbjct: 363 VLHESLNDAGKQSRLWSLKDIDQVLRNNKGTESTQAVVLNLSEAFEASWNPEAFAKMGNL 422

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL                      +  +K+QL +GL  LP  L+ L W   PL +LP   
Sbjct: 423 RLL---------------------MILNKLQLQHGLKCLPSGLKVLVWKECPLESLPIGD 461

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
           +   LV+L++  SK++  W+G K            L  ++ K  + L   P         
Sbjct: 462 QSDELVDLDMCHSKIKHLWKGTKL--------LGNLKTINLKNSKYLHQTPDFTGIPNLE 513

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            ++   C+NL+                    EV +S+  L  +  + L  CK LK +   
Sbjct: 514 KLDLEGCINLV--------------------EVHASLGLLKKISYVTLEDCKNLKSLPGK 553

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
             ++ SL  LIL GC ++   P+  E M +L  +  D  P+ ELP +   L GL  L + 
Sbjct: 554 L-EMNSLKRLILTGCTSVRKLPDFGESMTNLSTLALDEIPLAELPPTIGYLTGLNSLLLR 612

Query: 595 D------------------------CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA 630
           D                        CSK   LPDN+   E L  +  + +AI ++PSS+ 
Sbjct: 613 DCKNIYSLPDTFSKLKSLKRLNLSGCSKFSKLPDNLHENEALECLNVSNTAIREVPSSIV 672

Query: 631 LSNMLRSLDSSHCKGLESFPRTFLL-----------------------GLSAMGLLHIS- 666
               L SL    CKGL     + LL                       GLS++  L +S 
Sbjct: 673 HLKNLISLLFHGCKGLARNSESSLLPLGRIFGFGTHPTPKKLILPSFSGLSSLKKLDLSY 732

Query: 667 -DYAVREIPQEIAYLSSLEILYLSGNNFESL-PAIIKQMSQLRFIHLEDFNMLQSLPELP 724
            +     IP ++  LSSL  L +SGNNF +L    I ++ +L  + L     LQSLP LP
Sbjct: 733 CNLYDESIPDDLGCLSSLVTLDISGNNFVNLRDGCISKLLKLERLVLSSCQNLQSLPNLP 792

Query: 725 LCLKYLHLIDCKMLQSL 741
             + +++  DC  L+ L
Sbjct: 793 PNVHFVNTSDCSSLKPL 809


>gi|359493291|ref|XP_002273385.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1110

 Score =  347 bits (891), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 258/761 (33%), Positives = 390/761 (51%), Gaps = 111/761 (14%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+++G+WG+GGIGKTT+A+ I++  S++F+G+ F+  V   S     + +++K++L    
Sbjct: 210 VRMLGVWGLGGIGKTTIARVIYNSISYQFDGASFLPSVCQQS-----MPNVKKKLLCDIT 264

Query: 67  SEKLEVAGPNIPH-FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
              L   G N+     K ++++ K+LIV+DDV+ + QLK L+   D  G GSRI++TTRD
Sbjct: 265 G--LSYGGLNVDEGLNKNKIKKKKILIVVDDVDCLSQLKDLVPNGDWLGGGSRIIITTRD 322

Query: 126 KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
           K +L         IY V GL+F E+   F  +AF+           SR++V+Y++G PL 
Sbjct: 323 KHLL--LEHGVDAIYEVQGLDFAESIHLFNLYAFQARFPKPAYRGFSRNIVNYSEGLPLA 380

Query: 186 LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF 245
           L+V G  L  K    W   L+ L      EI D++   +IS+++L  + K IFLDIACFF
Sbjct: 381 LKVFGDFLFRKSIDEWESALYKLKHQSMKEIQDVF---QISYDRLDYKTKDIFLDIACFF 437

Query: 246 EGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGK 305
           +GE+++FV+ ILD +E  + D L +KSL++ S N + MH +LQ+MG+ +V Q   +EPGK
Sbjct: 438 KGEEREFVSRILDGAEKAITD-LSNKSLLTFSNNKIMMHPLLQQMGQGVVHQACPQEPGK 496

Query: 306 RSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLD--------PRAFTNMSNLRLF 357
           +SRLW  +++ R+L  N+GTDAIEGIFLD S  + I           P  FT  +   + 
Sbjct: 497 QSRLWRSEDVHRILLKNEGTDAIEGIFLDTSPAEPIEFTILDTSPAVPIEFTTEAFKMMN 556

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
           K  + K     K  SM     +   +V++    ++   +LRYLHWD YPL  LPSNF  +
Sbjct: 557 KLRLLKVCRGHKCGSM-----VKNYEVRVSTNFEFPSYELRYLHWDGYPLEYLPSNFHGE 611

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKY---------------LSALSFKGCQSLR 462
           NLVELNLR SK+   W+G K      + N  +               L +L  KGC +L 
Sbjct: 612 NLVELNLRYSKLRVLWQGLKPLEKLKVINLSHSQQLIQIPDFSDTPNLESLILKGCTNLE 671

Query: 463 SFPSNL-HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLD 521
           + PS++ H    V ++ S+C  L E                 + E+P +   L  LE L+
Sbjct: 672 NIPSSIWHLDSLVNLDLSHCSKLQE-----------------LAEIPWN---LYSLEYLN 711

Query: 522 LRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
           L  CK LK +  S C L+ L TL ++GC  L   P+ L  +E L+++Y+  + +   P S
Sbjct: 712 LASCKNLKSLPESLCNLKCLKTLNVIGCSKL---PDNLGSLECLEKLYASSSELIS-PQS 767

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNI-GSLEYLYYILAAASAISQLPSSVALSNMLRSLDS 640
             +L GL  L V D    + +   I G +  LY                     L  L+ 
Sbjct: 768 DSSLAGLCSLKVLDMHDTNLMQRAISGDIGSLY--------------------SLEELNL 807

Query: 641 SHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAII 700
           S+C   E                       +EIP +I  L SL +L LSGN F  +   I
Sbjct: 808 SYCNLTE-----------------------KEIPDDICCLYSLRVLDLSGNLFLGVTDAI 844

Query: 701 KQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
            Q+S+LR + L     L  +P+LP  L+ L   DC  +++L
Sbjct: 845 SQLSELRELGLRHCKSLLEIPKLPSSLRVLDAHDCTGIKTL 885



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 170/400 (42%), Gaps = 79/400 (19%)

Query: 559 LEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-L 616
           L+ +E LK I  S    + ++P  F + P LE L ++ C+ L+N+P +I  L+ L  + L
Sbjct: 630 LKPLEKLKVINLSHSQQLIQIPD-FSDTPNLESLILKGCTNLENIPSSIWHLDSLVNLDL 688

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE 676
           +  S + +L         L  L+ + CK L+S P + L  L  +  L++      ++P  
Sbjct: 689 SHCSKLQELAEIPWNLYSLEYLNLASCKNLKSLPES-LCNLKCLKTLNV--IGCSKLPDN 745

Query: 677 IAYLSSLEILYLSGNNFES--LPAIIKQMSQLRFIHLEDFNMLQ-----------SLPEL 723
           +  L  LE LY S +   S    + +  +  L+ + + D N++Q           SL EL
Sbjct: 746 LGSLECLEKLYASSSELISPQSDSSLAGLCSLKVLDMHDTNLMQRAISGDIGSLYSLEEL 805

Query: 724 PLCLKYLHLIDCKMLQSLPVLPFCLESLDLTG------CNMLRSLPELPLCLQYLNLEDC 777
            L   Y +L + ++   +  L + L  LDL+G       + +  L EL    + L L  C
Sbjct: 806 NL--SYCNLTEKEIPDDICCL-YSLRVLDLSGNLFLGVTDAISQLSEL----RELGLRHC 858

Query: 778 NMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLK 837
             L  +P+LP  L++L   +C  +++L            SVL+         QW     K
Sbjct: 859 KSLLEIPKLPSSLRVLDAHDCTGIKTLSS---------TSVLQ--------WQWQLNCFK 901

Query: 838 SAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVL 897
           SA                        L  I+ M    L       +++  S       V+
Sbjct: 902 SAF-----------------------LQEIQEMKYRRLLSLPANGVSQGFS------TVI 932

Query: 898 PGS-EIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAV 936
           PGS E+P+W  +Q  G+ + + LPP+   ++ +G A C V
Sbjct: 933 PGSGELPEWIQHQGVGNEVIVPLPPNWYDKDFLGLALCCV 972


>gi|357509573|ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
 gi|355500090|gb|AES81293.1| TMV resistance protein N [Medicago truncatula]
          Length = 1579

 Score =  347 bits (889), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 265/797 (33%), Positives = 390/797 (48%), Gaps = 120/797 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ ++  GIWGMGGIGKTTLAK I+ +  ++F+ SCF+ +VR  S    GL  LQ+++LS
Sbjct: 257 SEEIRFEGIWGMGGIGKTTLAKHIYKKIHNQFDVSCFLENVRELSSERDGLLCLQRKLLS 316

Query: 64  TTLSEKLEVAGPNIPHFT--KERVRRM----KLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
                 L+++   I      KE +R +    K+L+VLDD++   QL+ L G+   FG GS
Sbjct: 317 -----HLKISSMRIESLDQGKEIIRNLLFNKKVLLVLDDLSSDIQLENLAGK-QWFGPGS 370

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           R+++TTRDK +L      E  IY    L   E+ + F   AF+     E     S+  V 
Sbjct: 371 RVIITTRDKHLLVSLSVCE--IYDAQILNSHESLQLFSQKAFRSGKPEEGFVELSKQAVQ 428

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
              G PL L+VLGS LC ++ S W   L  L +  +   +DIY  L+IS++ L    K+I
Sbjct: 429 CAGGIPLALKVLGSFLCGRKASVWEDALKMLQQDLQ---NDIYKTLRISYDGLRDMEKAI 485

Query: 238 FLDIACFFEGEDKDFVASILDDSESDVL---DILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FLDIACFF+G  KD V  IL++   + L   D+LI+KSL++  G  L MHD+LQEMGR I
Sbjct: 486 FLDIACFFKGSRKDHVTQILENCGLNPLIGIDVLIEKSLITYDGWHLGMHDLLQEMGRNI 545

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V  ES  + GK+SRLW  K+I +VL++NKGT++ + + L+LS+    + +P AF  M NL
Sbjct: 546 VLHESLNDAGKQSRLWSLKDIDQVLRNNKGTESTQAVVLNLSEAFEASWNPEAFAKMGNL 605

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL                      +  +K+QL +GL  LP  L+ L W   PL +LP   
Sbjct: 606 RLL---------------------MILNKLQLQHGLKCLPSGLKVLVWKECPLESLPIGD 644

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
           +   LV+L++  SK++  W+G K            L  ++ K  + L   P         
Sbjct: 645 QSDELVDLDMCHSKIKHLWKGTKL--------LGNLKTINLKNSKYLHQTPDFTGIPNLE 696

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            ++   C+NL+                    EV +S+  L  +  + L  CK LK +   
Sbjct: 697 KLDLEGCINLV--------------------EVHASLGLLKKISYVTLEDCKNLKSLPGK 736

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
             ++ SL  LIL GC ++   P+  E M +L  +  D  P+ ELP +   L GL  L + 
Sbjct: 737 L-EMNSLKRLILTGCTSVRKLPDFGESMTNLSTLALDEIPLAELPPTIGYLTGLNSLLLR 795

Query: 595 D------------------------CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA 630
           D                        CSK   LPDN+   E L  +  + +AI ++PSS+ 
Sbjct: 796 DCKNIYSLPDTFSKLKSLKRLNLSGCSKFSKLPDNLHENEALECLNVSNTAIREVPSSIV 855

Query: 631 LSNMLRSLDSSHCKGLESFPRTFLL-----------------------GLSAMGLLHIS- 666
               L SL    CKGL     + LL                       GLS++  L +S 
Sbjct: 856 HLKNLISLLFHGCKGLARNSESSLLPLGRIFGFGTHPTPKKLILPSFSGLSSLKKLDLSY 915

Query: 667 -DYAVREIPQEIAYLSSLEILYLSGNNFESL-PAIIKQMSQLRFIHLEDFNMLQSLPELP 724
            +     IP ++  LSSL  L +SGNNF +L    I ++ +L  + L     LQSLP LP
Sbjct: 916 CNLYDESIPDDLGCLSSLVTLDISGNNFVNLRDGCISKLLKLERLVLSSCQNLQSLPNLP 975

Query: 725 LCLKYLHLIDCKMLQSL 741
             + +++  DC  L+ L
Sbjct: 976 PNVHFVNTSDCSSLKPL 992



 Score = 40.0 bits (92), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 12/109 (11%)

Query: 727 LKYLHLIDCKMLQSLP--VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLP 784
           + Y+ L DCK L+SLP  +    L+ L LTGC  +R LP+    +  L+    + +  L 
Sbjct: 719 ISYVTLEDCKNLKSLPGKLEMNSLKRLILTGCTSVRKLPDFGESMTNLSTLALDEI-PLA 777

Query: 785 ELPLCLQLLT------VRNCNRLQSLPEI---LLCLQELDASVLEKLSK 824
           ELP  +  LT      +R+C  + SLP+    L  L+ L+ S   K SK
Sbjct: 778 ELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLNLSGCSKFSK 826


>gi|111146892|gb|ABH07384.1| CMR1 [Phaseolus vulgaris]
          Length = 1133

 Score =  347 bits (889), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 263/775 (33%), Positives = 387/775 (49%), Gaps = 118/775 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+ +++    +F+ SCF+ ++R  S+T  GL H+QK++LS      L V   +  +
Sbjct: 226 KTTIARLVYEAVKEKFKVSCFLENIRELSKT-NGLVHIQKEILS-----HLNVRSNDFCN 279

Query: 80  FTKER------VRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFR 133
               +      +   K+L+VLDDV+++ QL+ L G+ + FG GSR+++TTRDK +L+ + 
Sbjct: 280 LYDGKKIIANSLSNKKVLLVLDDVSDISQLENLGGKREWFGPGSRLIITTRDKHLLKTYG 339

Query: 134 GEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSL 193
            +    Y+  GL   EA + FC  AFK++   E      + VV Y +G PL LEVLGS L
Sbjct: 340 VD--MTYKARGLAQNEALQLFCLKAFKQDQPKEGYLNLCKGVVEYARGLPLALEVLGSHL 397

Query: 194 CLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFV 253
           C +    W   L  +     S+I D    LKIS++ L P  K +FLDIACFF G D D V
Sbjct: 398 CGRSTEVWHSALEQIRSFPHSKIQDT---LKISYDSLEPTEKKLFLDIACFFVGMDIDEV 454

Query: 254 ASILD---DSESDVLDILIDKSLVSI--SGNFLNMHDILQEMGRQIVRQESEKEPGKRSR 308
            +IL+   D     +DILI++SLV++  + N L MHD+LQEMGR IV QES  +PGKRSR
Sbjct: 455 VNILENCGDHPIIGIDILIERSLVTLDMTKNKLGMHDLLQEMGRNIVYQESPNDPGKRSR 514

Query: 309 LWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR----AFTNMSNLRLFKFYVPKF 364
           LW  K+I  VL  NKGTD I GI L+L  ++  + + R    +F+ +S LRL K      
Sbjct: 515 LWSQKDIDYVLTKNKGTDEIRGIVLNL--VQPYDCEARWNTESFSKISQLRLLKL----- 567

Query: 365 YEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNL 424
                              +QLP GL+ LP  L+ +HW   PL+TLP + +   +V+L L
Sbjct: 568 -----------------CDMQLPRGLNCLPSALKVVHWRGCPLKTLPLSNQLDEVVDLKL 610

Query: 425 RCSKVEQPWEGE----------------------------------KAC-----VPSSIQ 445
             SK+EQ W G                                   K C     V  S+ 
Sbjct: 611 PYSKIEQLWHGTELLEKLRFINLSFSKNLKQSPDFVGVPNLESLVLKGCTSLTEVHPSLV 670

Query: 446 NFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVN---LIEFPQISGKVTRLYLGQS 502
             K L  L+F+ C+ L++ P  +       +N S C     L EF +    ++ L L  +
Sbjct: 671 RHKKLVWLNFEDCKKLKTLPRKMEMSSLNDLNLSGCSEFKCLPEFAESMEHLSVLCLEGT 730

Query: 503 AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM 562
           AI ++P+S+ CL  L  LD + CK L  +  +  KLRSL+ L + GC  L   PE L+++
Sbjct: 731 AITKLPTSLGCLIGLSHLDTKNCKNLVCLPDTIHKLRSLIVLNVSGCSKLSSLPEGLKEI 790

Query: 563 EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAI 622
           + L+ + +  T I ELPS    L  L  + V  C    +   N   L +        ++I
Sbjct: 791 KCLEELDASETAIQELPSFVFYLENLRDISVAGCKGPVSKSVNSFFLPFKRLFGNQQTSI 850

Query: 623 S-QLPSSVALSNMLRSLDSSHCK-GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
             +LP S      L+ ++ S+C    ESFP  F                          L
Sbjct: 851 GFRLPPSALSLPSLKRINLSYCNLSEESFPGDF------------------------CSL 886

Query: 681 SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
           SSL IL L+GNNF SLP+ I ++++L  + L     LQ+LP+LP  ++ L   +C
Sbjct: 887 SSLMILNLTGNNFVSLPSCISKLAKLEHLILNSCKKLQTLPKLPSNMRGLDASNC 941


>gi|147841678|emb|CAN73064.1| hypothetical protein VITISV_003258 [Vitis vinifera]
          Length = 1567

 Score =  347 bits (889), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 229/626 (36%), Positives = 347/626 (55%), Gaps = 52/626 (8%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           + V+++GI G GG+GKTT+AKAI+++ S +++GS F+ ++R  S+  G +  LQ+++L  
Sbjct: 202 NKVRVIGICGTGGVGKTTIAKAIYNEISCQYDGSSFLKNMRERSK--GDILQLQQELLHG 259

Query: 65  TLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
            L  K      N+       K  +   ++LI+  DV+E+ QL+ L  E D F   S I++
Sbjct: 260 ILRGKF-FKINNVDEGISMIKRCLSSNRVLIIFYDVDELKQLEYLAEEKDWFQAKSTIII 318

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           T+RDK VL ++  +    Y V+ L  EEA E F  +AFK+NH  +     S +++ Y  G
Sbjct: 319 TSRDKHVLARYGVDIP--YEVSKLNKEEAIELFSLWAFKQNHPKKVYKNLSYNIIDYANG 376

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L+VLG+SL  K+ S W   L  L  I   EIH++   L+ISF+ L    K IFLD+
Sbjct: 377 LPLALKVLGASLFGKKISEWESALCKLKIIPHMEIHNV---LRISFDGLDDIDKGIFLDV 433

Query: 242 ACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           ACFF+G+DKDFV+ IL       +  L D+ L+++S N L+MHD++Q+MG +I+RQE  K
Sbjct: 434 ACFFKGDDKDFVSRILGAHAKHGITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQECPK 493

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
           +PG+RSRLWD      VL  N GT AIEG+FLD  K    +L   +F  M+ LRL K + 
Sbjct: 494 DPGRRSRLWDSNAY-HVLMRNTGTRAIEGLFLDRCKFNPSHLTTESFKEMNKLRLLKIHN 552

Query: 362 PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVE 421
           P+     KL          + +  LP   ++   +LRYLHWD YPL++LP NF  KNLVE
Sbjct: 553 PR----RKL----------FLENHLPRDFEFSSYELRYLHWDGYPLKSLPMNFHAKNLVE 598

Query: 422 LNLRCSKVEQPWEGEKAC----------------VP--SSIQNFKYLSALSFKGCQSLRS 463
           L+LR S ++Q W+G K                  +P  SS+ N   L  L+ +GC SL  
Sbjct: 599 LSLRDSNIKQVWKGNKLHDKLRVIDLSHSVHLIRIPGFSSVPN---LEILTLEGCVSLEL 655

Query: 464 FPSNLH-FVCPVTINFSYCVNLIEFPQISGKVTRLY---LGQSAIEEVPSSIECLTDLEV 519
            P  ++ +    T++ + C  L  FP+I G + +L    L  +AI ++PSSI  L  L+ 
Sbjct: 656 LPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQT 715

Query: 520 LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE-HFPEILEKMEHLKRIYSDRTPITEL 578
           L L  C +L +I +  C L SL  L L  C  +E   P  +  +  L+++  +    + +
Sbjct: 716 LLLEECSKLHKIPSYICHLSSLKVLNLGHCNMMEGGIPSDICYLSSLQKLNLEGGHFSSI 775

Query: 579 PSSFENLPGLEVLFVEDCSKLDNLPD 604
           P +   L  L+ L +  C+ L+ +P+
Sbjct: 776 PPTINQLSRLKALNLSHCNNLEQIPE 801



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 18/241 (7%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S + EVP  IE  ++L+ L LR C+ L  + +S    +SL TL   GC  LE FPEIL+ 
Sbjct: 1084 SDMNEVPI-IENPSELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQD 1142

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL-EYLYYILAAAS 620
            ME L++++ D T I E+PSS + L  L+ L +     L NLP++I +L  +   ++ +  
Sbjct: 1143 MESLRKLFLDGTAIKEIPSSIQRLRVLQYLLLRS-KNLVNLPESICNLTSFKTLVVESCP 1201

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
               +LP ++     L  L       + +F    L GL ++  L++    ++ I Q     
Sbjct: 1202 NFKKLPDNLGRLQSLLHLSVGPLDSM-NFQLPSLSGLCSLRALNLQGCNLKGISQ----- 1255

Query: 681  SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
                     GN+F  +P  I Q+  L  + L    MLQ +PELP  L  L    C  L++
Sbjct: 1256 ---------GNHFSRIPDGISQLYNLEDLDLGHCKMLQHIPELPSGLWCLDAHHCTSLEN 1306

Query: 741  L 741
            L
Sbjct: 1307 L 1307



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 187/473 (39%), Gaps = 89/473 (18%)

Query: 589  EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
            EV  +E+ S+LD+L             L     ++ LPSS+     L +L  S C  LES
Sbjct: 1088 EVPIIENPSELDSL------------CLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLES 1135

Query: 649  FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
            FP   L  + ++  L +   A++EIP  I  L  L+ L L   N  +LP  I  ++  + 
Sbjct: 1136 FPE-ILQDMESLRKLFLDGTAIKEIPSSIQRLRVLQYLLLRSKNLVNLPESICNLTSFKT 1194

Query: 709  IHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP-L 767
            + +E     + LP+        +L   + L  L V P  L+S++         LP L  L
Sbjct: 1195 LVVESCPNFKKLPD--------NLGRLQSLLHLSVGP--LDSMNF-------QLPSLSGL 1237

Query: 768  C-LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPE---ILLCLQELDASVLEKLS 823
            C L+ LNL+ CN             L  +   N    +P+    L  L++LD        
Sbjct: 1238 CSLRALNLQGCN-------------LKGISQGNHFSRIPDGISQLYNLEDLDLG------ 1278

Query: 824  KHSPDLQWAPESLKSAAICFEFTNCLKL-NGKANNKILADSLLRIRHMAIASLRLGYEMA 882
             H   LQ  PE L S   C +  +C  L N  + + +L  SL +     I       +  
Sbjct: 1279 -HCKMLQHIPE-LPSGLWCLDAHHCTSLENLSSQSNLLWSSLFKCFKSQI-------QRV 1329

Query: 883  INEKLSELRGSLIVLPGS-EIPDWFSNQSSGSSICIQLP-PHSSCRNLIGFAFCAVLDSK 940
            I  +  E RG +        IP+W S+Q SG  I ++LP       + +GF  C +    
Sbjct: 1330 IFVQQREFRGRVKTFIAEFGIPEWISHQKSGFKITMKLPWSWYENDDFLGFVLCFLYVPL 1389

Query: 941  KVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNS-RYIEDLIDSDRVILGFKPCL---- 995
            ++++     F     FD +    S        Y S ++ E   D D    G   CL    
Sbjct: 1390 EIETKTPWCFNCKLNFDDDSAYFS--------YQSDQFCEFCYDEDASSQG---CLMYYP 1438

Query: 996  NVGFPDGYHHT-----IATFKFFAERKFYKIKRCGLCPVYANPSETKDNTFTI 1043
                P  YH        A+F  +   K  K+ RCG   +YA+  E   N  TI
Sbjct: 1439 KSRIPKSYHSNEWRTLNASFNVYFGVKPVKVARCGFHFLYAHDYEQ--NNLTI 1489



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 108/249 (43%), Gaps = 54/249 (21%)

Query: 414  FKPKNLVELNLRCSKVEQPWEGEKACV---------PSSIQNFKYLSALSFKGCQSLRSF 464
            FK  ++ E+ +    +E P E +  C+         PSSI  FK L+ LS  GC  L SF
Sbjct: 1081 FKDSDMNEVPI----IENPSELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESF 1136

Query: 465  PSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRG 524
            P                    E  Q    + +L+L  +AI+E+PSSI+ L  L+ L LR 
Sbjct: 1137 P--------------------EILQDMESLRKLFLDGTAIKEIPSSIQRLRVLQYLLLRS 1176

Query: 525  CKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
             K L  +  S C L S  TL++  C N +  P+ L +++ L  ++    P+  +     +
Sbjct: 1177 -KNLVNLPESICNLTSFKTLVVESCPNFKKLPDNLGRLQSL--LHLSVGPLDSMNFQLPS 1233

Query: 585  LPG---LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
            L G   L  L ++ C    NL             ++  +  S++P  ++    L  LD  
Sbjct: 1234 LSGLCSLRALNLQGC----NLKG-----------ISQGNHFSRIPDGISQLYNLEDLDLG 1278

Query: 642  HCKGLESFP 650
            HCK L+  P
Sbjct: 1279 HCKMLQHIP 1287



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 44/226 (19%)

Query: 581 SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS 640
            F ++P LE+L +E C  L+ LP  I   ++L                       ++L  
Sbjct: 635 GFSSVPNLEILTLEGCVSLELLPRGIYKWKHL-----------------------QTLSC 671

Query: 641 SHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAI 699
           + C  LE FP      +  + +L +S  A+ ++P  I +L+ L+ L L   +    +P+ 
Sbjct: 672 NGCSKLERFPE-IKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKIPSY 730

Query: 700 IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNML 759
           I  +S L+ ++L   NM++    +P  + YL                 L+ L+L G +  
Sbjct: 731 ICHLSSLKVLNLGHCNMMEG--GIPSDICYLS---------------SLQKLNLEGGHFS 773

Query: 760 RSLPELPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQS 803
              P +     L+ LNL  CN L  +PELP  L+LL     NR  S
Sbjct: 774 SIPPTINQLSRLKALNLSHCNNLEQIPELPSRLRLLDAHGSNRTSS 819


>gi|225464430|ref|XP_002264399.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1673

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 256/694 (36%), Positives = 370/694 (53%), Gaps = 57/694 (8%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ V +VGI G+GGIGKTT+AKAI++  S+EF GSCF+ +VR  S+       LQ+++L 
Sbjct: 201 SNEVCVVGISGIGGIGKTTIAKAIYNDISYEFHGSCFLKNVRERSK--DNTLQLQQELLH 258

Query: 64  TTLSEK-LEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
             L  K L+V+  NI       K  +   K+L+VLDDV+ + QL+ L  E + F   S +
Sbjct: 259 GILRGKCLKVS--NIEEGLKMIKNCLNSKKVLVVLDDVDALKQLEYLAEEPEWFSTKSIV 316

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TTRDKR L ++       Y V  L  EE+ E F  +AFK+N   E     S  ++ Y 
Sbjct: 317 IITTRDKRFLTQYGKHVS--YEVEKLNEEESIELFSRWAFKQNLPQEAYRNLSYHIIEYA 374

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           KG PL L+VLGS    K +S W + LH L +I   EI ++   LKIS++ L    K IFL
Sbjct: 375 KGLPLALKVLGSFFLGKTRSQWKEALHKLEKIPHIEIQNV---LKISYDGLNDIEKGIFL 431

Query: 240 DIACFFEGEDKDFVASILDDSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
           DIACFFEGEDK+ V+ IL +   +  + IL DK L++I  N L MH+++Q+MG +IVRQE
Sbjct: 432 DIACFFEGEDKEVVSRILHNVSIECGISILHDKGLITILENKLEMHNLIQQMGHEIVRQE 491

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
             KEPGK SRLWDP+++ RVL  N GT+AIEGI LD+S  + I     AF  M+ LRL  
Sbjct: 492 CPKEPGKWSRLWDPEDVYRVLTKNTGTEAIEGIILDISASEQIQFTTEAFKMMNRLRLLI 551

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
            +    Y+   +      +Q+  SK+ LP        +L +LHWD Y L +LPSNF+  N
Sbjct: 552 VHQDAKYD-SMVEHHVVGDQVQLSKMHLPANFQIPSFELTFLHWDGYSLESLPSNFQADN 610

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKY---------------LSALSFKGCQSLRS 463
           LVEL+LRCS ++Q  EG        + N  +               L  L  +GC +L S
Sbjct: 611 LVELHLRCSNIKQLCEGNMIFNILKVINLSFSVHLIKIPDITSVPNLEILILEGCTNLMS 670

Query: 464 FPSNLHFVCPV-TINFSYCVNLIEFPQISGKVT---RLYLGQSAIEEVP-SSIECLTDLE 518
            PS+++ +  + T+    C+ L  FP+I  ++     LYL ++ ++E+P SS + L  L 
Sbjct: 671 LPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNLRELYLSETDLKELPSSSTKHLKGLT 730

Query: 519 VLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK----------------- 561
            LDL GC+ L  +  S C +RSL  L    C  L+  PE LE                  
Sbjct: 731 DLDLTGCRNLIHVPKSICAMRSLKALSFSYCPKLDKLPEDLESLPCLESLSLNFLRCELP 790

Query: 562 ----MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD-NLPDNIGSLEYLYYIL 616
               +  LK +  D++ IT      +N          + ++++  +  NI  L  L  + 
Sbjct: 791 CLSGLSSLKELSLDQSNITGEVIPNDNGLSSLKSLSLNYNRMERGILSNIFCLSSLEELK 850

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
              +  S +P+ ++    LRSL+ SHCK L   P
Sbjct: 851 LRGNHFSTIPAGISKLPRLRSLNLSHCKKLLQIP 884



 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 147/274 (53%), Gaps = 30/274 (10%)

Query: 496  RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
            +L L  +   E+P+ IEC   L+ L LR C++L+ + +  CKL+SL +L   GC  L+ F
Sbjct: 1137 KLCLAGNEFYELPT-IECPLALDSLCLRNCEKLESLPSDICKLKSLKSLFCSGCSELKSF 1195

Query: 556  PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS------------------ 597
            PEI+E ME+L+++Y ++T I ELPSS ++L GL+ L VE C                   
Sbjct: 1196 PEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTSLKVL 1255

Query: 598  ------KLDNLPDNIGSLEYL--YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
                  KL  LP+N+GSL  L   Y   + S   QLPS   L + LR LD  +    +  
Sbjct: 1256 VVDCCPKLYKLPENLGSLRSLEELYATHSYSIGCQLPSLSGLCS-LRILDIQNSNLSQRA 1314

Query: 650  PRTFLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
                +  L ++ LL++S++ + E  IP+EI  LSSL+ L L GN+F S+P  I +++ LR
Sbjct: 1315 IPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGGNHFSSIPDGISRLTALR 1374

Query: 708  FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
             + L     L  +PE    L+ L +  C  L++L
Sbjct: 1375 VLDLSHCQNLLRIPEFSSSLQVLDVHSCTSLETL 1408



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 113/270 (41%), Gaps = 58/270 (21%)

Query: 410  LPSNFKPKNLVELNLR-CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            LP+   P  L  L LR C K+E         +PS I   K L +L   GC  L+SFP   
Sbjct: 1148 LPTIECPLALDSLCLRNCEKLES--------LPSDICKLKSLKSLFCSGCSELKSFP--- 1196

Query: 469  HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
                             E  +    + +LYL Q+AIEE+PSSI+ L  L+ L +  C  L
Sbjct: 1197 -----------------EIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNL 1239

Query: 529  KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPIT--ELPSSFENLP 586
              +  S C L SL  L++  C  L   PE L  +  L+ +Y+  +     +LP S   L 
Sbjct: 1240 VSLPESICNLTSLKVLVVDCCPKLYKLPENLGSLRSLEELYATHSYSIGCQLP-SLSGLC 1298

Query: 587  GLEVLFVEDCS----------------KLDNL----------PDNIGSLEYLYYILAAAS 620
             L +L +++ +                KL NL          P  I +L  L  +L   +
Sbjct: 1299 SLRILDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGGN 1358

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFP 650
              S +P  ++    LR LD SHC+ L   P
Sbjct: 1359 HFSSIPDGISRLTALRVLDLSHCQNLLRIP 1388



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 157/379 (41%), Gaps = 74/379 (19%)

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
            LPS    L  L+ LF   CS+L + P+ + ++E L  +    +AI +LPSS+     L+ 
Sbjct: 1171 LPSDICKLKSLKSLFCSGCSELKSFPEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQC 1230

Query: 638  LDSSHCKGLESFPRTFLLGLSAMGLLHISDY-AVREIPQEIAYLSSLEILYLS-----GN 691
            L    C  L S P + +  L+++ +L +     + ++P+ +  L SLE LY +     G 
Sbjct: 1231 LSVESCDNLVSLPES-ICNLTSLKVLVVDCCPKLYKLPENLGSLRSLEELYATHSYSIGC 1289

Query: 692  NFESLPAIIKQMSQLRFIHLEDFNMLQ-SLPELPLCLKYLHLIDCKMLQ----SLPVLPF 746
               SL      +  LR + +++ N+ Q ++P    CL  L L++          +P   +
Sbjct: 1290 QLPSLSG----LCSLRILDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIY 1345

Query: 747  CLESLD--LTGCNMLRSLPE---LPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRL 801
             L SL   L G N   S+P+       L+ L+L  C  L  +PE    LQ+L V +C  L
Sbjct: 1346 NLSSLQALLLGGNHFSSIPDGISRLTALRVLDLSHCQNLLRIPEFSSSLQVLDVHSCTSL 1405

Query: 802  QSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILA 861
            ++L                     SP                             + +L 
Sbjct: 1406 ETLS--------------------SP-----------------------------SNLLQ 1416

Query: 862  DSLLRIRHMAIASLRLGYEMAINEKLSE-LRGSL-IVLP-GSEIPDWFSNQSSGSSICIQ 918
              LL+     I  L L  ++ I   ++  L G + I +P  S IP+W   Q  GS +  +
Sbjct: 1417 SCLLKCFKSLIQDLELENDIPIEPHVAPYLNGGISIAIPRSSGIPEWIRYQKEGSKVAKK 1476

Query: 919  LPPH-SSCRNLIGFAFCAV 936
            LP +     + +GFA  ++
Sbjct: 1477 LPRNWYKNDDFLGFALFSI 1495



 Score = 46.6 bits (109), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 144/341 (42%), Gaps = 80/341 (23%)

Query: 486 EFPQISGKVTRLY------------LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
           E P+  GK +RL+             G  AIE +           +LD+   ++++  + 
Sbjct: 491 ECPKEPGKWSRLWDPEDVYRVLTKNTGTEAIEGI-----------ILDISASEQIQFTTE 539

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKM-EHLKRIYSDRTPITE--LPSSFENLPGLEV 590
           +F  +  L  LI+       H     + M EH   +  D+  +++  LP++F+ +P  E+
Sbjct: 540 AFKMMNRLRLLIV-------HQDAKYDSMVEH--HVVGDQVQLSKMHLPANFQ-IPSFEL 589

Query: 591 LFVE-DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            F+  D   L++LP N  + + L  +    S I QL     + N+L+ ++ S    L   
Sbjct: 590 TFLHWDGYSLESLPSNFQA-DNLVELHLRCSNIKQLCEGNMIFNILKVINLSFSVHLIKI 648

Query: 650 PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRF 708
           P                         +I  + +LEIL L G  N  SLP+ I ++  LR 
Sbjct: 649 P-------------------------DITSVPNLEILILEGCTNLMSLPSDIYKLKGLRT 683

Query: 709 IHLEDFNMLQSLPELPLCLK-----YLHLIDCKMLQSLPVLPF-CLESLDLTGCNMLRSL 762
           +   +   L+S PE+   +K     YL   D K L S        L  LDLTGC  L  +
Sbjct: 684 LCCRECLKLRSFPEIKERMKNLRELYLSETDLKELPSSSTKHLKGLTDLDLTGCRNLIHV 743

Query: 763 PELPLC----LQYLNLEDCNMLRSLPE----LPLCLQLLTV 795
           P+  +C    L+ L+   C  L  LPE    LP CL+ L++
Sbjct: 744 PK-SICAMRSLKALSFSYCPKLDKLPEDLESLP-CLESLSL 782



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 72/162 (44%), Gaps = 36/162 (22%)

Query: 686  LYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP 745
            L L+GN F  LP I                      E PL L  L L +C+ L+SLP   
Sbjct: 1138 LCLAGNEFYELPTI----------------------ECPLALDSLCLRNCEKLESLPS-D 1174

Query: 746  FC----LESLDLTGCNMLRSLPELPLCLQ-----YLNLEDCNMLRSLPELPLCLQLLTVR 796
             C    L+SL  +GC+ L+S PE+   ++     YLN      L S  +    LQ L+V 
Sbjct: 1175 ICKLKSLKSLFCSGCSELKSFPEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVE 1234

Query: 797  NCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKS 838
            +C+ L SLPE +  L  L   V++      P L   PE+L S
Sbjct: 1235 SCDNLVSLPESICNLTSLKVLVVDC----CPKLYKLPENLGS 1272


>gi|163914239|dbj|BAF95889.1| N-like protein [Nicotiana tabacum]
          Length = 1169

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 278/776 (35%), Positives = 386/776 (49%), Gaps = 109/776 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           +D   I+GIWGMGG+GKTT+A+ IFD  SH+FE +CF++D++ N E    L  LQ  +LS
Sbjct: 215 NDVRIILGIWGMGGLGKTTIARVIFDILSHQFEAACFLADIKEN-EKRHQLHSLQNTLLS 273

Query: 64  TTLSEKLEVAGPNIPHFTK----ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
                K +    N  H  K    +R+   K+LIVLDD++    L+ L G++  FG GSR+
Sbjct: 274 ELSRRKDDYV--NNKHDGKRMIPDRLFSKKVLIVLDDIDHKDHLEYLAGDIGWFGNGSRV 331

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           VVTTR+K ++EK       IY +  L   E+ + FC  AF++    E     S  VV Y 
Sbjct: 332 VVTTRNKHLIEK----NDVIYEMTALSDHESIQLFCQHAFRKEDPDEHFKKLSLEVVKYA 387

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            G PL L+V GS L     + W   +  +     SE   I D LKIS++ L P  + +FL
Sbjct: 388 NGLPLALKVWGSLLHNLGLTEWKSAIEQMKINSNSE---IVDKLKISYDGLEPIQQEMFL 444

Query: 240 DIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF--LNMHDILQEMGRQI 294
           DIACF  GE K ++  IL+         L ILIDKSLV I+ ++  + MHD++Q+MG+ I
Sbjct: 445 DIACFLRGEQKAYILQILESCHIGAEYGLRILIDKSLVFITEDYQIIQMHDLIQDMGKYI 504

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFL-DLSKIKGINLDPRAFTNMSN 353
           V    +K PG+RSRLW  ++   V+ +N GT A+E I++ DL  ++    +  A  NM  
Sbjct: 505 VNL--QKNPGERSRLWLNEDFEEVMTNNAGTVAVEAIWVHDLDTLR---FNNEAMKNMKK 559

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LR+   Y+ +             E   ++    P  ++YL   LR+ + D YP  +LPS 
Sbjct: 560 LRI--LYIDR-------------EVYDFNISDEP--IEYLSNNLRWFNVDGYPCESLPST 602

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           F+PK LV L L  S +   W  E   +PS       L  ++  G +SL   P        
Sbjct: 603 FEPKMLVHLELSFSSLRYLWM-ETKHLPS-------LRTINLTGSESLMRTPDFTGMPNL 654

Query: 474 VTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
             ++ S+C NL                    EEV  S+ C + L  LDL  CK LKR   
Sbjct: 655 EYLDMSFCFNL--------------------EEVHHSLGCCSKLIGLDLTDCKSLKRFPC 694

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS------------ 581
               + SL  L L GC +LE FPEI  +M+   +I+  R+ I ELPSS            
Sbjct: 695 --VNVESLEYLDLPGCSSLEKFPEIRGRMKLEIQIHM-RSGIRELPSSSFHYQTRITWLD 751

Query: 582 ---FENLP----------GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSS 628
               ENL            L  LFV  CSKL++LP+ IG L+ L  + A+ + IS+ PSS
Sbjct: 752 LSDMENLVVFPSSICRLISLVQLFVSGCSKLESLPEEIGDLDNLEVLYASDTLISRPPSS 811

Query: 629 VALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR-------EIPQEIAYLS 681
           +   N L SL S  C G       F     A GLL + +  +         +P++I  LS
Sbjct: 812 IVRLNKLNSL-SFRCSGDNGV--HFEFPPVAEGLLSLKNLDLSYCNLIDGGLPEDIGSLS 868

Query: 682 SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM 737
           SL+ L L GNNFE LP  I Q+  LR + L     L  LPEL   L  LH +DC M
Sbjct: 869 SLKELDLRGNNFEHLPRSIAQLGALRSLGLSFCQTLIQLPELSHELNELH-VDCHM 923


>gi|359495274|ref|XP_002276409.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1135

 Score =  346 bits (887), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 278/749 (37%), Positives = 386/749 (51%), Gaps = 92/749 (12%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           +SD V++VGIWGMGGIGKTTL +A++ + S++FEG  F+ +V  + +   GL  LQ+++L
Sbjct: 207 ASDDVRMVGIWGMGGIGKTTLVRAVYSRISYQFEGCSFLENVAEDLKKK-GLIGLQEKLL 265

Query: 63  STTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           S  L E+      N+   T  K R+   K+LIVLD+VN+   L+ LIG  D FG+GS I+
Sbjct: 266 SHLLEEE----NLNMKELTSIKARLHSKKVLIVLDNVNDPTILECLIGNQDWFGRGSTII 321

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDKR+L      +  +Y+V+    +EA E    ++ K     ED    SR V+ Y +
Sbjct: 322 ITTRDKRLL---LSHKINLYKVHKFNDDEALEFLARYSLKHELLREDFLELSRVVICYAQ 378

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL L VLGS L    K  W   L  L  I   +IH   ++LKIS++ L    K+IFLD
Sbjct: 379 GLPLALTVLGSFLFSMSKEEWRDQLDKLKSIPNMKIH---EVLKISYDGLDFEEKNIFLD 435

Query: 241 IACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
           IACF +GEDK++V  ILD         +  L DKSL+S   N + MHD++QEMG +IVRQ
Sbjct: 436 IACFLKGEDKNYVKEILDYCGFFSVSGIRALADKSLISFFHNRIMMHDLIQEMGMEIVRQ 495

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRL 356
           ES   PG+RSRLW  K+I+  LK N     IEGIFLDLS  +  I+   +AF  M  LRL
Sbjct: 496 ESHN-PGQRSRLWLHKDINDALKKNTENGKIEGIFLDLSHSQEIIDFSTQAFPRMYKLRL 554

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
            K Y           +++ E      KV     L +   +LRYL+   Y L++L ++F  
Sbjct: 555 LKVYESNKISRNFGDTLNKEN----CKVHFSPKLRFCYDELRYLYLYGYSLKSLDNDFNA 610

Query: 417 KNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI 476
           KNLV L++  S + + W+G            K L  L                      +
Sbjct: 611 KNLVHLSMHYSHINRLWKG-----------IKVLEKLK--------------------VV 639

Query: 477 NFSYCVNLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
           + S+  +LIE P  S    + RL L G  ++ +V  S+  L  L  L L+ C++LK + +
Sbjct: 640 DLSHSKSLIETPDFSRVPNLERLVLEGCISLHKVHPSLGVLNKLNFLSLKNCEKLKSLPS 699

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
           S C L+SL T IL GC  LE FPE    +E LK +++D  P+  LPSSF  L  LE+L  
Sbjct: 700 SMCDLKSLETFILSGCSRLEDFPENFGNLEMLKELHADGIPVRVLPSSFSLLRNLEILSF 759

Query: 594 EDCSKLDNLPDNIGSLEYLYYILAAASAISQLP--SSVALSNMLRSLDSSHCKGLESFPR 651
           + C                       S    LP  SS +  ++L      H  GL S  R
Sbjct: 760 KGCR-------------------GPPSTSWLLPRRSSSSTGSILH-----HLSGLYSLTR 795

Query: 652 TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
             L      G  ++SD         +  LSSLE+L LSGNNF +LP  I+ +S L  + L
Sbjct: 796 LNL------GYCNLSDETNL---SSLCLLSSLEVLGLSGNNFVTLPN-IRGLSSLEGLLL 845

Query: 712 EDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           E    LQ LPELP  +  L   DC  L++
Sbjct: 846 EKCKRLQILPELPSSIYSLIAQDCISLEN 874



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 29/166 (17%)

Query: 895  IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSF 954
            +++ GS IPDW   QSSG  +   LPP+    NL+G A   V              YV F
Sbjct: 905  VMVYGSRIPDWIRYQSSGCEVEADLPPNWYNSNLLGLALSFVT-------------YV-F 950

Query: 955  QFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNV----------GFPDGYH 1004
              ++ I      ++    Y +  I    D + V L     L +          G P  +H
Sbjct: 951  ASNVIIPVSYTLRYSTSSYIANRISIRCDKEGVGLDHVWLLYIKLPLFSNWHNGTPINWH 1010

Query: 1005 ---HTIATFKFFAERKFYKIKRCGLCPVYANPSETKDNTFTINFAT 1047
               H   +F       +  IKRCG   VY+N  +   N   I F++
Sbjct: 1011 EVTHISVSFGTQVMGWYPPIKRCGFDLVYSNDQDV--NPPVIQFSS 1054


>gi|297794743|ref|XP_002865256.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311091|gb|EFH41515.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1184

 Score =  346 bits (887), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 330/1068 (30%), Positives = 482/1068 (45%), Gaps = 210/1068 (19%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V +VG+ GM GI KTT+A  ++ +    F+G CF++++  N E   GL HLQ+++L   L
Sbjct: 148  VIVVGVLGMAGIRKTTVADCVYKRNYSRFDGYCFLANI-NNEERLHGLNHLQQKLLRKLL 206

Query: 67   SEK-LEVAGPNIPHFT-KERVRRMKLLIVLDDVNEVGQLKRLIGELDQ--FGQGSRIVVT 122
             E+ L+V  P   H   K+R++  +L IVLDDV    Q++ LIG+  Q  + +GSRIV+T
Sbjct: 207  DEENLDVGAPEGAHEALKDRLQNKRLFIVLDDVTNEDQIRILIGQWKQKLYREGSRIVIT 266

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP--EDLNWHSRSVVSYTK 180
            TRDK++LEK        Y V  L   EA E FC  AF  N  P  E +     S+    K
Sbjct: 267  TRDKKLLEKV---VDATYVVPRLRDREALELFCLNAFSCNLSPNTEFMASIRPSLSIMLK 323

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            G+P+ L++LGS  C        +   D  +                      + KSIFLD
Sbjct: 324  GHPVTLKLLGSDRCQGTNFTGRESWRDWRK---------------------GQTKSIFLD 362

Query: 241  IACFFEGEDKDFVASILDDSESD---VLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
            IACFF+    DFV+ IL+    D   ++D L+DK LV+I  N L MHD+L  MG++I  +
Sbjct: 363  IACFFKSGKTDFVSRILNTDHIDATTLIDDLVDKCLVTIYDNRLEMHDLLLTMGKEIGYE 422

Query: 298  ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
             S KE G + RLW+  +I R+LK+  GT    GIFLD+S ++ + L P  FT M NL+  
Sbjct: 423  SSIKEAGNQGRLWNQDDICRLLKYKTGTAETRGIFLDMSNLENMKLSPDVFTKMWNLKFL 482

Query: 358  KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
            KF+         L SM                               YPL  LPSNF PK
Sbjct: 483  KFF--------SLFSMG------------------------------YPLEYLPSNFNPK 504

Query: 418  NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
             LV+LNLR S ++  WE EK        N   L  L     + L S    L       +N
Sbjct: 505  KLVDLNLRHSHLKTLWEEEK--------NTAELRWLDISHSKDLLSLSGLLDARNIERLN 556

Query: 478  FSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
               C +LI+                      SSI  +  L  L+ R C  LK +      
Sbjct: 557  AECCTSLIKC---------------------SSIRQMDSLVYLNFRECTSLKSLPKGI-S 594

Query: 538  LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS 597
            L+SL +LIL GC  L  FP I E +E L   Y D T I  +P S ++L  L VL ++ C 
Sbjct: 595  LKSLKSLILSGCSKLRTFPTISENIESL---YLDGTAIKRVPESIDSLRYLAVLNLKKCC 651

Query: 598  KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGL 657
            KL +LP N+  ++ L  ++ +                        C  L+ FP      +
Sbjct: 652  KLRHLPSNLCKMKSLQELILSG-----------------------CSKLKCFPE-IDEDM 687

Query: 658  SAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAI----IKQMSQLRFIHLED 713
              + +L + D A+++IP ++  +S+L++    G+ F+             S L  ++L D
Sbjct: 688  EHLEILLMDDTAIKQIPIKMC-MSNLKMFTFGGSKFQGSTGYELLPFSGCSHLSDLYLTD 746

Query: 714  FNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLN 773
             N L  LP    CL  +H + C    +L  LP  ++ L                 L+ L+
Sbjct: 747  CN-LHKLPNNFSCLSSVHSL-CLSRNNLEYLPESIKILHH---------------LKSLD 789

Query: 774  LEDCNMLRSLPELPLCLQLLTVRNCNRLQSL--PEILLCLQELDASVLEKLSKHSPDLQW 831
            L+ C  L SLP LP  LQ L   +C  L+++  P   L L E   S              
Sbjct: 790  LKHCRKLNSLPVLPSNLQYLDAHDCASLETVANPMTHLVLAERVQST------------- 836

Query: 832  APESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELR 891
                       F FT+C KLN +A   I+A + L+ + +A A L+  ++  + E L+   
Sbjct: 837  -----------FLFTDCFKLNREAQENIVAHAQLKSQILANACLKRNHKGLVLEPLAS-- 883

Query: 892  GSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFY 951
               +  PGS++P WF NQ  G+SI   LPPH       G + C V+  K  +    R+  
Sbjct: 884  ---VSFPGSDLPLWFRNQRMGTSIDTHLPPHWCDSKFRGLSLCVVVSFKDYEDQTSRFSV 940

Query: 952  V-SFQFDLE-------IKTLSETKHV--DLGYNSRYIEDLIDSDRVILGFKPCLNVG--F 999
            +   +F  E       I TL     +    G+ SR     + SD V L +  C +V    
Sbjct: 941  ICKCKFKSESGDCIRFICTLGGWNKLCGSSGHQSRK----LGSDHVFLSYNNCFHVKKFR 996

Query: 1000 PDGYH-----HTIATFKFF----AERKF--YKIKRCGLCPVYANPSET 1036
             DG       +T A+FKFF    ++RK   +++ +CG+  +YA P E+
Sbjct: 997  EDGNDNNRCCNTAASFKFFVTDDSKRKLGSFEVVKCGMGLLYA-PDES 1043


>gi|255578414|ref|XP_002530072.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223530425|gb|EEF32312.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1135

 Score =  345 bits (886), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 280/777 (36%), Positives = 394/777 (50%), Gaps = 97/777 (12%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           SS  V +VGI G GGIGKTT+AKAI+++ +++FEGSCF+ +VR   E       LQ+ +L
Sbjct: 204 SSKDVWMVGICGTGGIGKTTIAKAIYNKIANQFEGSCFLENVRKTPEEC--FVQLQESLL 261

Query: 63  STTLSEKLEVAG--PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
              L +K    G      +  K+R+   ++LIV+DDV+ V QLK+L   ++ FG GSRI+
Sbjct: 262 IEVLGDKNIFVGNFSRGINCIKDRLCSKRVLIVIDDVDHVDQLKKL-AAVNGFGAGSRII 320

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRD+R+L       K I+++N L   +A   F   AFK     ED    S+ +V+Y K
Sbjct: 321 ITTRDERLL--VEHGVKSIHKINELCPNDALVLFSWNAFKNPQPAEDYMELSQWIVNYAK 378

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL L VLGS L  +    W   +  L R   +    IY++LKIS++ L    K+IFLD
Sbjct: 379 GLPLALVVLGSFLYKRAVPEWESEIAKLKR---NPNKHIYEMLKISYDGLDGNEKAIFLD 435

Query: 241 IACFFEGEDKDFVASILDDSESDVL---DILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
           IACFF+G DKD V  ILD  + + +    +LI+KSL+SI  N + MH +LQ MGRQ+V +
Sbjct: 436 IACFFKGMDKDVVLKILDACDFNPVIGVQVLIEKSLISIENNKIQMHALLQSMGRQVVCE 495

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
           +S K P KRSRLW  +++  VL  NKG D  EGI LDL K + I L   AF  M +LR+ 
Sbjct: 496 QSPK-PNKRSRLWLHEDVLAVLTGNKGNDDTEGILLDLPKPEEIQLSADAFIKMKSLRIL 554

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
                          +     ++     LPNGL       R+L W   PL ++PS F  +
Sbjct: 555 ---------------LIRNAHITGGPFDLPNGL-------RWLEWPACPLLSMPSGFCAR 592

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
            LV LN+  S + +  E          +N+  L  +  + C+ L   P           +
Sbjct: 593 KLVGLNMHRSYIREFGE--------EFKNYNLLKFIDLRDCEFLTGTP-----------D 633

Query: 478 FSYCVNLIEFPQISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFC 536
           FS   NL           RL LG  S + EV  S+  L  LE L    C  LK + ++F 
Sbjct: 634 FSAIPNL----------ERLNLGGCSKLVEVHQSVGNLAKLEFLSFEFCFNLKNLPSTF- 682

Query: 537 KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
           KLRSL TL+L GC  LE FPEI+ +++ L+++   +T I  LPSS  NL GL+VL +  C
Sbjct: 683 KLRSLRTLLLTGCQKLEAFPEIVGEIKWLEKLSLTKTAIKGLPSSIANLTGLKVLTLTYC 742

Query: 597 SKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
             L  LP  I  LE L  + L   S + + P++    N   SL          FP+   L
Sbjct: 743 KNLTYLPHGIYKLEQLKCLFLEGCSMLHEFPAN---PNGHSSL---------GFPKFRCL 790

Query: 656 GLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN 715
            L    L  I+        +E      L+ L LSGN+F SLP      + LR + L    
Sbjct: 791 DLRNCNLPDIT------FLKEHNCFPMLKDLDLSGNDFVSLPPYFHLFNNLRSLKLSKCM 844

Query: 716 MLQSLPELPLCLKYLHLIDCKMLQSLPVL-----------PFCLESLDLTGCNMLRS 761
            +Q +PELPL +K +   DC+ L+  P L           P  L  +D + C+ L +
Sbjct: 845 KVQEIPELPLYIKRVEARDCESLERFPQLARIFKCNEEDRPNRLHDIDFSNCHKLAA 901



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 204/471 (43%), Gaps = 86/471 (18%)

Query: 582  FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDS 640
            F  +P LE L +  CSKL  +  ++G+L  L ++       +  LPS+  L ++   L +
Sbjct: 634  FSAIPNLERLNLGGCSKLVEVHQSVGNLAKLEFLSFEFCFNLKNLPSTFKLRSLRTLLLT 693

Query: 641  SHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIPQEIAYLSSLEILYLS-GNNFESLPA 698
              C+ LE+FP   ++G +  +  L ++  A++ +P  IA L+ L++L L+   N   LP 
Sbjct: 694  G-CQKLEAFPE--IVGEIKWLEKLSLTKTAIKGLPSSIANLTGLKVLTLTYCKNLTYLPH 750

Query: 699  IIKQMSQLRFIHLEDFNMLQSLPELP-------------LCLKYLHLIDCKMLQSLPVLP 745
             I ++ QL+ + LE  +ML   P  P             L L+  +L D   L+     P
Sbjct: 751  GIYKLEQLKCLFLEGCSMLHEFPANPNGHSSLGFPKFRCLDLRNCNLPDITFLKEHNCFP 810

Query: 746  FCLESLDLTGCNMLRSLPELPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQS 803
              L+ LDL+G + +   P   L   L+ L L  C  ++ +PELPL ++ +  R+C  L+ 
Sbjct: 811  M-LKDLDLSGNDFVSLPPYFHLFNNLRSLKLSKCMKVQEIPELPLYIKRVEARDCESLER 869

Query: 804  LPE---ILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKIL 860
             P+   I  C +E   + L  +                     +F+NC KL     +K L
Sbjct: 870  FPQLARIFKCNEEDRPNRLHDI---------------------DFSNCHKLAAN-ESKFL 907

Query: 861  ADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLP 920
             +++L        S +   ++ I           I LPGSEIP WFS +S   S+  QLP
Sbjct: 908  ENAVL--------SKKFRQDLRIE----------IFLPGSEIPKWFSYRSEEDSLSFQLP 949

Query: 921  PHSSCRNLIGFAFCAVLDSKKVDS-DCFRYFYVSFQ----FDLEIKTLSETKHVDLGYNS 975
                C  +     CA+L  K  ++ +  R  +++ Q    F  +  +L E+ HV L Y  
Sbjct: 950  SR-ECERIRALILCAILSIKDGETVNISRQVFINGQNVIMFSRQFFSL-ESNHVWLYYLP 1007

Query: 976  RYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGL 1026
            R         R I G     N     G  H   +FK         +K CG+
Sbjct: 1008 R---------RFIRGLHLKQN-----GDVHFEVSFKVLGATMGSTLKSCGV 1044


>gi|224120756|ref|XP_002330944.1| hypothetical protein POPTRDRAFT_838042 [Populus trichocarpa]
 gi|222873138|gb|EEF10269.1| hypothetical protein POPTRDRAFT_838042 [Populus trichocarpa]
          Length = 813

 Score =  345 bits (885), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 270/761 (35%), Positives = 396/761 (52%), Gaps = 98/761 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
           KTT+++ ++D+   +FEGSCF+++VR       G   LQ+Q+LS  L E+  V   +   
Sbjct: 70  KTTVSRVLYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEILMERASVWDSSRGI 129

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRG-EEK 137
              K R+R  K+L++LDDV++  QL+ L  E   FG  SRI++T+RDK V   F G ++ 
Sbjct: 130 EMIKRRLRLKKILLILDDVDDKKQLEFLAAEPGWFGPRSRIIITSRDKNV---FTGNDDT 186

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           KIY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV+GS L  + 
Sbjct: 187 KIYEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFLYGRS 246

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W   +   NR+ E     I D+L+ISF+ L    + IFLDIACF +G  KD +  IL
Sbjct: 247 IPEWRGAI---NRMHEIPDCKIMDVLRISFDGLHESDQKIFLDIACFLKGFKKDRITRIL 303

Query: 258 DDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
           D    +    + +LI++SL+S+ G+ + MH++LQ MG++IVR E  KEPGKRSRLW  ++
Sbjct: 304 DSCGFNAGIGIPVLIERSLISVYGDQVWMHNLLQIMGKEIVRCEDPKEPGKRSRLWTYED 363

Query: 315 ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
           +S  L  N G + IE IFLD+  IK    + +AF+ MS LRL K                
Sbjct: 364 VSLALMDNTGKEKIEAIFLDMPGIKEAQWNMKAFSKMSRLRLLKI--------------- 408

Query: 375 TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
                    VQL  G + L K+LR+L W +YP ++LP+  +   LVEL++  S +EQ W 
Sbjct: 409 -------DNVQLSEGPEDLSKELRFLEWHSYPSKSLPAGLQVDGLVELHMANSSIEQLWY 461

Query: 435 GEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG-- 492
           G K+ V     N K                           IN S  +NL + P ++G  
Sbjct: 462 GCKSAV-----NLK--------------------------VINLSNSLNLSKTPDLTGIP 490

Query: 493 KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
            ++ L L G +++ EV  S+    +L+ ++L  CK   RI  S  ++ SL    L GC  
Sbjct: 491 NLSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSF-RILPSNLEMESLKVFTLDGCTK 549

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC--------------- 596
           LE FP+I+  M  L  +  D T I EL SS  +L GLEVL + +C               
Sbjct: 550 LEKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKS 609

Query: 597 ---------SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
                    S+L N+P+N+G +E L     + ++I Q P+S+ L   L+ L    CK + 
Sbjct: 610 LKKLDLSGCSELKNIPENLGKVESLEEFDVSGTSIRQPPASIFLLKSLKVLSFDGCKRIA 669

Query: 648 SFPRT----FLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIK 701
             P       L GL ++ +L +    +RE  +P++I  LSSL+ L LS NNF SLP  I 
Sbjct: 670 VNPTDQRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNFVSLPRSIN 729

Query: 702 QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
           ++  L  + LED  ML+SLPE+P  ++ L+L  C  L+ +P
Sbjct: 730 KLFGLETLVLEDCRMLESLPEVPSKVQTLNLNGCIRLKEIP 770


>gi|357515097|ref|XP_003627837.1| NBS resistance protein [Medicago truncatula]
 gi|355521859|gb|AET02313.1| NBS resistance protein [Medicago truncatula]
          Length = 1731

 Score =  345 bits (885), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 264/749 (35%), Positives = 378/749 (50%), Gaps = 89/749 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  VQI+GIWGMGG GKTTLA  +F +FS ++EGSC    V   S+  G + +   ++LS
Sbjct: 210 SAQVQIIGIWGMGGTGKTTLASILFQRFSFKYEGSCLFEKVTEVSKRHG-INYACNKLLS 268

Query: 64  TTLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF-GQGSRIVV 121
             L E L++  P  IP   + R++ MK  IVLDDV+    L+ LIG    + G GS ++V
Sbjct: 269 KLLREDLDIDSPKLIPSMIRRRLKSMKSFIVLDDVHNSELLQNLIGVGHGWLGSGSTVIV 328

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRDK VL    G   KIY V  +    + + F   AF +    +     S+  V Y  G
Sbjct: 329 TTRDKHVL--ISGGIDKIYEVKKMNSRNSVKLFSMNAFDKVSPKDGYVELSKRAVDYANG 386

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
           NPL L+VLGS L  K +  W   L  L +I  +EI  I+   ++S+++L  + K IFLDI
Sbjct: 387 NPLALKVLGSLLRCKSEIEWDCALAKLKKIPNNEIDSIF---RLSYDELDDKEKDIFLDI 443

Query: 242 ACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQ 297
           ACFF+G +++ +  IL++    +D+ +  L+DK+LV + S N + MHD++QEMG+QIVR+
Sbjct: 444 ACFFKGHERNSITKILNECGFFADIGISHLLDKALVRVDSKNCIQMHDLIQEMGKQIVRE 503

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
           ES K PG+RSRL DPKE+  VLK+N+G+  +E IF D ++   +NL P  F  M NLRL 
Sbjct: 504 ESHKNPGQRSRLCDPKEVYDVLKNNRGSKNVEAIFFDATQCTHVNLRPDTFEKMKNLRLL 563

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
            F                ++Q     V LP+GL  LP+ LRY  WD YPL+TLP  F  +
Sbjct: 564 AF----------------QDQKGVKSVSLPHGLGLLPENLRYFLWDGYPLKTLPPTFCLE 607

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
            LVEL+L  S VE+ W G        + N   L  +   G                    
Sbjct: 608 MLVELSLTGSLVEKLWNG--------VLNVPNLEKIDLSG-------------------- 639

Query: 478 FSYCVNLIEFPQISGKVTRLYLGQSAIEEVP---SSIECLTDLEVLDLRGCKRLKRISTS 534
                 LIE P +SG     Y+     E +P   SSI  L  LEVL++ GC  LK IS++
Sbjct: 640 ---STKLIECPNVSGSPNLKYVLLDECESMPEVDSSIFHLQKLEVLNVSGCTSLKSISSN 696

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF-- 592
            C   +L  L  + C NL+      + ++ L    +      ELPSS  +   L   F  
Sbjct: 697 TCS-PALRQLSAINCFNLKDLSVPFDYLDGLGLSLTGWDG-NELPSSLLHAKNLGNFFFP 754

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
           + DC  L NL +N     ++  I        Q    + L  M  S       G +S    
Sbjct: 755 ISDC--LVNLTEN-----FVDRICLVKQRNCQQDPFITLDKMFTS------PGFQSVKNL 801

Query: 653 FLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE 712
             + +  +           EIP  I+ LSSLE L L     +SLP  +K + QL+F+ + 
Sbjct: 802 VFVDIPMLS----------EIPDSISLLSSLESLILFDMAIKSLPETVKYLPQLKFVDIH 851

Query: 713 DFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           D  +LQS+P L   ++ L + +C+ L+ +
Sbjct: 852 DCKLLQSIPALSQFIQILVVWNCESLEEV 880



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 42/309 (13%)

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLP 586
           LK +  +FC L  LV L L G L +E     +  + +L++I  S  T + E P+     P
Sbjct: 597 LKTLPPTFC-LEMLVELSLTGSL-VEKLWNGVLNVPNLEKIDLSGSTKLIECPN-VSGSP 653

Query: 587 GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
            L+ + +++C  +  +  +I  L+ L  +  +     +  SS   S  LR L + +C  L
Sbjct: 654 NLKYVLLDECESMPEVDSSIFHLQKLEVLNVSGCTSLKSISSNTCSPALRQLSAINCFNL 713

Query: 647 E--SFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS--------GNNFESL 696
           +  S P  +L GL     L ++ +   E+P  + +  +L   +            NF   
Sbjct: 714 KDLSVPFDYLDGLG----LSLTGWDGNELPSSLLHAKNLGNFFFPISDCLVNLTENFVDR 769

Query: 697 PAIIKQMSQLRFIHLEDFNMLQSLPELP--LCLKYLHLIDCKMLQSLP------VLPFCL 748
             ++KQ    R    + F  L  +   P    +K L  +D  ML  +P           L
Sbjct: 770 ICLVKQ----RNCQQDPFITLDKMFTSPGFQSVKNLVFVDIPMLSEIPDSISLLSSLESL 825

Query: 749 ESLDLTGCNMLRSLPE----LPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSL 804
              D+     ++SLPE    LP  L+++++ DC +L+S+P L   +Q+L V NC   +SL
Sbjct: 826 ILFDMA----IKSLPETVKYLPQ-LKFVDIHDCKLLQSIPALSQFIQILVVWNC---ESL 877

Query: 805 PEILLCLQE 813
            E+L   +E
Sbjct: 878 EEVLSSTRE 886


>gi|147845097|emb|CAN78476.1| hypothetical protein VITISV_009816 [Vitis vinifera]
          Length = 826

 Score =  345 bits (885), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 229/620 (36%), Positives = 336/620 (54%), Gaps = 49/620 (7%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTTLA  I++Q +H+FEG+ F+ +     E  G L+ LQ+++L+  L EK+     NI  
Sbjct: 221 KTTLAIGIYNQIAHQFEGASFLPNAAEVKEHRGSLK-LQRKLLADILGEKIARI-SNIDE 278

Query: 80  ---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
                K+ +   K+LI+LDDV+ + QL+ L G    FG GSRI++T+R+K +L+    E 
Sbjct: 279 GISLIKKTLCSRKVLIILDDVSALTQLEFLAGSRHWFGSGSRIIITSRNKHLLDVH--EV 336

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH-SRSVVSYTKGNPLVLEVLGSSLCL 195
             +Y V  L+ EEAF+ F  +AF E    +D  W  S   ++Y  G PL ++V+G  L  
Sbjct: 337 DGLYEVQKLKSEEAFKLFSLYAF-EADLXDDRFWELSGRALNYCDGLPLAVKVVGCYLRX 395

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           K +  W   L  L  + +  +  +   L++S+++L    K +FLDIACFF G+D D V  
Sbjct: 396 KTELEWEDELLKLTTVGQJTVQYV---LRLSYDRLEHTEKDLFLDIACFFRGKDSDSVGR 452

Query: 256 ILDDSESDV--LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           ILD        + +L D S +SI  N + MH ++Q+MG +I+R+ES  +PG+RSRLW+P+
Sbjct: 453 ILDSCNFSAIGMKVLKDCSFISILDNKIEMHGLMQQMGWEIIRRESPGQPGQRSRLWNPE 512

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           ++  VL    GT AIEGI  D+S  K I +   A   M+NLRL + Y       + L S 
Sbjct: 513 DVHAVLTQKTGTKAIEGISFDVSASKEIQITSEALKKMTNLRLLRVY------WDGLSSY 566

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
            +      + V LP   ++   +LRYLHWD + L +LPSNF  K LVEL+L+ S +   W
Sbjct: 567 DS------NTVHLPEEFEFPSYELRYLHWDGWSLESLPSNFNGKKLVELSLKHSSLNHLW 620

Query: 434 EGEKACVPSSIQNFKY---------------LSALSFKGCQSLR---SFPSNLHFVCPV- 474
           +G K      + +  +               L  L+  GC SLR   S  S  H++    
Sbjct: 621 KGNKCLENLKVMDLSHSXYLVECPDVSGAPSLETLNLYGCTSLREDASLFSQNHWIGKKL 680

Query: 475 -TINFSYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
             +N S C  L +FP I   +     L+L  +AI E+PSS+  L  L +L+++ CK LK 
Sbjct: 681 EVLNLSGCSRLEKFPDIKANMESLLELHLEGTAIIELPSSVGYLRGLVLLNMKSCKNLKI 740

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
           +    C L+SL TLIL GC  LE  PEI E MEHL+ +  D T I ELP S   L GL +
Sbjct: 741 LPGRICDLKSLKTLILSGCSKLERLPEITEVMEHLEELLLDGTSIRELPRSILRLKGLVL 800

Query: 591 LFVEDCSKLDNLPDNIGSLE 610
           L +  C +L  L ++I  L+
Sbjct: 801 LNLRKCKELRTLRNSICGLK 820



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 67/287 (23%)

Query: 557 EILEKMEHLK--RIYSD-----RTPITELPSSFENLPGLEVLFVE-DCSKLDNLPDNIGS 608
           E L+KM +L+  R+Y D      +    LP  FE  P  E+ ++  D   L++LP N   
Sbjct: 545 EALKKMTNLRLLRVYWDGLSSYDSNTVHLPEEFE-FPSYELRYLHWDGWSLESLPSNFNG 603

Query: 609 LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY 668
            + +   L  +S       +  L N L+ +D SH   L   P   + G  ++  L++  Y
Sbjct: 604 KKLVELSLKHSSLNHLWKGNKCLEN-LKVMDLSHSXYLVECPD--VSGAPSLETLNL--Y 658

Query: 669 AVREIPQEIAYLSS-------LEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSL 720
               + ++ +  S        LE+L LSG +  E  P I   M  L  +HLE      ++
Sbjct: 659 GCTSLREDASLFSQNHWIGKKLEVLNLSGCSRLEKFPDIKANMESLLELHLEG----TAI 714

Query: 721 PELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNML 780
            ELP  + YL                                      L  LN++ C  L
Sbjct: 715 IELPSSVGYLR------------------------------------GLVLLNMKSCKNL 738

Query: 781 RSLPELPLC----LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLS 823
           + LP   +C    L+ L +  C++L+ LPEI   ++ L+  +L+  S
Sbjct: 739 KILPG-RICDLKSLKTLILSGCSKLERLPEITEVMEHLEELLLDGTS 784


>gi|87162712|gb|ABD28507.1| Leucine-rich repeat; Leucine-rich [Medicago truncatula]
          Length = 1006

 Score =  345 bits (885), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 272/754 (36%), Positives = 403/754 (53%), Gaps = 92/754 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS+  V ++GIWGMGGIGKTTLA A++++   E+EGSCF++++   SE  G + +L+ +
Sbjct: 52  LDSTADVLVIGIWGMGGIGKTTLAAAVYNRLCFEYEGSCFMANITEESEKHGMI-YLKNK 110

Query: 61  MLSTTLSEK-LEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS  L E  L +  P  +P + K R+ R K+L+VLDD+N++  L+ L+G LD FG GSR
Sbjct: 111 ILSILLKENDLHIGTPIGVPPYVKRRLARKKVLLVLDDINDLEHLENLVGGLDWFGSGSR 170

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNW--HSRSVV 176
           I+VTTRDK+VL K        Y    L+ ++A + F   AF+  H   D+ W   SR V+
Sbjct: 171 IIVTTRDKQVLGK---RVNCTYEAKALQSDDAIKLFIMNAFE--HGCLDMEWIELSRRVI 225

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            Y  GNPL L+VLGS L  K K  W   L  L ++  ++I ++   L++S+++L    K+
Sbjct: 226 HYANGNPLALKVLGSFLYGKSKIEWESQLQKLKKMPHAKIQNV---LRLSYDRLDREEKN 282

Query: 237 IFLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLV---SISG-NFLNMHDILQE 289
           IFL IAC  +G +   + ++LD    S    L +L DK+L+     SG + ++MHD++QE
Sbjct: 283 IFLYIACLLKGYEVQQIIALLDACGFSTIIGLRVLKDKALIIEAKGSGRSIVSMHDLIQE 342

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFT 349
           MG +IVR+E  ++PGKRSRLWDP ++ +VL +N GT AI+ I L++SK   ++L P+ F 
Sbjct: 343 MGWEIVREECVEDPGKRSRLWDPNDVHQVLTNNTGTKAIKSITLNVSKFDELHLSPQVFG 402

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
            M  L+  KF   + Y  EK+             + LP GL+ LP  L    W +YPL++
Sbjct: 403 RMQQLKFLKF--TQHYGDEKI-------------LYLPQGLESLPNDLLLFQWVSYPLKS 447

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLH 469
           LP +F  +NLVEL L  S+VE+ W+G        IQN ++L  +     + L   P    
Sbjct: 448 LPQSFCAENLVELKLTWSRVEKLWDG--------IQNIQHLKKIDLSYSKYLLDLP---- 495

Query: 470 FVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
                  +FS   NL E             G  ++  V  SI  L  L  L+L  CK L 
Sbjct: 496 -------DFSKASNLEEIE---------LFGCKSLLNVHPSILRLNKLVRLNLFYCKALT 539

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
            + +    LRSL  L L GC  LE F    + M+ L       T I ELPSS  +L  LE
Sbjct: 540 SLRSD-THLRSLRDLFLSGCSRLEDFSVTSDNMKDLAL---SSTAINELPSSIGSLKNLE 595

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            L ++ C  L+ LP+ +  L                         LR+L    C  L++ 
Sbjct: 596 TLTLDFCKSLNKLPNEVIDLR-----------------------SLRALYVHGCTQLDAS 632

Query: 650 PRTFLL-GLSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
               LL GL+++  L + +   + EIP  I+ LSSL  L L   + E  PA IK +S+L 
Sbjct: 633 NLHILLSGLASLETLKLEECRNLSEIPDNISLLSSLRELLLKETDIERFPASIKHLSKLE 692

Query: 708 FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
            + ++    LQ++PELP  LK L+  DC  L+++
Sbjct: 693 KLDVKGCRRLQNMPELPPSLKELYATDCSSLETV 726



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 145/601 (24%), Positives = 252/601 (41%), Gaps = 90/601 (14%)

Query: 474  VTINFSYCVNLIEFPQISGKVTRL-------YLGQSAIEEVPSSIECLTDLEVLDLRGCK 526
            +T+N S    L   PQ+ G++ +L       + G   I  +P  +E L +  +L      
Sbjct: 384  ITLNVSKFDELHLSPQVFGRMQQLKFLKFTQHYGDEKILYLPQGLESLPNDLLLFQWVSY 443

Query: 527  RLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENL 585
             LK +  SFC   +LV L L     +E   + ++ ++HLK+I  S    + +LP  F   
Sbjct: 444  PLKSLPQSFCA-ENLVELKLTWS-RVEKLWDGIQNIQHLKKIDLSYSKYLLDLPD-FSKA 500

Query: 586  PGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCK 644
              LE + +  C  L N+  +I  L  L  + L    A++ L S   L + LR L  S C 
Sbjct: 501  SNLEEIELFGCKSLLNVHPSILRLNKLVRLNLFYCKALTSLRSDTHLRS-LRDLFLSGCS 559

Query: 645  GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS-GNNFESLPAIIKQM 703
             LE F  T       M  L +S  A+ E+P  I  L +LE L L    +   LP  +  +
Sbjct: 560  RLEDFSVTS----DNMKDLALSSTAINELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDL 615

Query: 704  SQLRFIHLE-----DFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNM 758
              LR +++      D + L  L      L+ L L +C+ L  +P     L S        
Sbjct: 616  RSLRALYVHGCTQLDASNLHILLSGLASLETLKLEECRNLSEIPD-NISLLSSLRELLLK 674

Query: 759  LRSLPELPLCLQYL------NLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQ 812
               +   P  +++L      +++ C  L+++PELP  L+ L   +C+ L+++      + 
Sbjct: 675  ETDIERFPASIKHLSKLEKLDVKGCRRLQNMPELPPSLKELYATDCSSLETV------MF 728

Query: 813  ELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAI 872
              +AS L +L  +    Q              F NC+ L+  +   I  ++ + ++ +A 
Sbjct: 729  NWNASDLLQLQAYKLHTQ--------------FQNCVNLDELSLRAIEVNAQVNMKKLAY 774

Query: 873  ASLR-LGYEMAINEKLSELRGSL-IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIG 930
              L  LG +         L G + ++ PGS++P+W   +++ +S+ +        +  +G
Sbjct: 775  NHLSTLGSKF--------LDGPVDVIYPGSKVPEWLMYRTTEASVTVDFSSAPKSK-FVG 825

Query: 931  FAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLG----YNSRYIEDLIDSDR 986
            F FC V      D   F         D  ++T +  K V LG    + S +  +   SD 
Sbjct: 826  FIFCVVAGQLPSDDKNF------IGCDCYLETGNGEK-VSLGSMDTWTSIHSSEFF-SDH 877

Query: 987  VILGFKP--CLNVGFPD--------GYHHTIATFKFFAE-------RKFYKIKRCGLCPV 1029
            + + +    CL    P+          +    +F+FFA+       R+   I+ CG+CP+
Sbjct: 878  IFMWYDELCCLQNSKPEKENMDELMASYIPKVSFEFFAQSGNTWKKRENNMIRGCGVCPI 937

Query: 1030 Y 1030
            Y
Sbjct: 938  Y 938


>gi|357454621|ref|XP_003597591.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355486639|gb|AES67842.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1169

 Score =  345 bits (884), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 272/754 (36%), Positives = 403/754 (53%), Gaps = 92/754 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS+  V ++GIWGMGGIGKTTLA A++++   E+EGSCF++++   SE  G + +L+ +
Sbjct: 215 LDSTADVLVIGIWGMGGIGKTTLAAAVYNRLCFEYEGSCFMANITEESEKHGMI-YLKNK 273

Query: 61  MLSTTLSEK-LEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS  L E  L +  P  +P + K R+ R K+L+VLDD+N++  L+ L+G LD FG GSR
Sbjct: 274 ILSILLKENDLHIGTPIGVPPYVKRRLARKKVLLVLDDINDLEHLENLVGGLDWFGSGSR 333

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNW--HSRSVV 176
           I+VTTRDK+VL K        Y    L+ ++A + F   AF+  H   D+ W   SR V+
Sbjct: 334 IIVTTRDKQVLGK---RVNCTYEAKALQSDDAIKLFIMNAFE--HGCLDMEWIELSRRVI 388

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            Y  GNPL L+VLGS L  K K  W   L  L ++  ++I ++   L++S+++L    K+
Sbjct: 389 HYANGNPLALKVLGSFLYGKSKIEWESQLQKLKKMPHAKIQNV---LRLSYDRLDREEKN 445

Query: 237 IFLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLV---SISG-NFLNMHDILQE 289
           IFL IAC  +G +   + ++LD    S    L +L DK+L+     SG + ++MHD++QE
Sbjct: 446 IFLYIACLLKGYEVQQIIALLDACGFSTIIGLRVLKDKALIIEAKGSGRSIVSMHDLIQE 505

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFT 349
           MG +IVR+E  ++PGKRSRLWDP ++ +VL +N GT AI+ I L++SK   ++L P+ F 
Sbjct: 506 MGWEIVREECVEDPGKRSRLWDPNDVHQVLTNNTGTKAIKSITLNVSKFDELHLSPQVFG 565

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
            M  L+  KF   + Y  EK+             + LP GL+ LP  L    W +YPL++
Sbjct: 566 RMQQLKFLKF--TQHYGDEKI-------------LYLPQGLESLPNDLLLFQWVSYPLKS 610

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLH 469
           LP +F  +NLVEL L  S+VE+ W+G        IQN ++L  +     + L   P    
Sbjct: 611 LPQSFCAENLVELKLTWSRVEKLWDG--------IQNIQHLKKIDLSYSKYLLDLP---- 658

Query: 470 FVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
                  +FS   NL E             G  ++  V  SI  L  L  L+L  CK L 
Sbjct: 659 -------DFSKASNLEEIE---------LFGCKSLLNVHPSILRLNKLVRLNLFYCKALT 702

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
            + +    LRSL  L L GC  LE F    + M+ L       T I ELPSS  +L  LE
Sbjct: 703 SLRSD-THLRSLRDLFLSGCSRLEDFSVTSDNMKDLAL---SSTAINELPSSIGSLKNLE 758

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            L ++ C  L+ LP+ +  L                         LR+L    C  L++ 
Sbjct: 759 TLTLDFCKSLNKLPNEVIDLR-----------------------SLRALYVHGCTQLDAS 795

Query: 650 PRTFLL-GLSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
               LL GL+++  L + +   + EIP  I+ LSSL  L L   + E  PA IK +S+L 
Sbjct: 796 NLHILLSGLASLETLKLEECRNLSEIPDNISLLSSLRELLLKETDIERFPASIKHLSKLE 855

Query: 708 FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
            + ++    LQ++PELP  LK L+  DC  L+++
Sbjct: 856 KLDVKGCRRLQNMPELPPSLKELYATDCSSLETV 889



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 145/601 (24%), Positives = 252/601 (41%), Gaps = 90/601 (14%)

Query: 474  VTINFSYCVNLIEFPQISGKVTRL-------YLGQSAIEEVPSSIECLTDLEVLDLRGCK 526
            +T+N S    L   PQ+ G++ +L       + G   I  +P  +E L +  +L      
Sbjct: 547  ITLNVSKFDELHLSPQVFGRMQQLKFLKFTQHYGDEKILYLPQGLESLPNDLLLFQWVSY 606

Query: 527  RLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENL 585
             LK +  SFC   +LV L L     +E   + ++ ++HLK+I  S    + +LP  F   
Sbjct: 607  PLKSLPQSFCA-ENLVELKLTWS-RVEKLWDGIQNIQHLKKIDLSYSKYLLDLPD-FSKA 663

Query: 586  PGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCK 644
              LE + +  C  L N+  +I  L  L  + L    A++ L S   L + LR L  S C 
Sbjct: 664  SNLEEIELFGCKSLLNVHPSILRLNKLVRLNLFYCKALTSLRSDTHLRS-LRDLFLSGCS 722

Query: 645  GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS-GNNFESLPAIIKQM 703
             LE F  T       M  L +S  A+ E+P  I  L +LE L L    +   LP  +  +
Sbjct: 723  RLEDFSVTS----DNMKDLALSSTAINELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDL 778

Query: 704  SQLRFIHLE-----DFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNM 758
              LR +++      D + L  L      L+ L L +C+ L  +P     L S        
Sbjct: 779  RSLRALYVHGCTQLDASNLHILLSGLASLETLKLEECRNLSEIPD-NISLLSSLRELLLK 837

Query: 759  LRSLPELPLCLQYL------NLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQ 812
               +   P  +++L      +++ C  L+++PELP  L+ L   +C+ L+++      + 
Sbjct: 838  ETDIERFPASIKHLSKLEKLDVKGCRRLQNMPELPPSLKELYATDCSSLETV------MF 891

Query: 813  ELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAI 872
              +AS L +L  +    Q              F NC+ L+  +   I  ++ + ++ +A 
Sbjct: 892  NWNASDLLQLQAYKLHTQ--------------FQNCVNLDELSLRAIEVNAQVNMKKLAY 937

Query: 873  ASLR-LGYEMAINEKLSELRGSL-IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIG 930
              L  LG +         L G + ++ PGS++P+W   +++ +S+ +        +  +G
Sbjct: 938  NHLSTLGSKF--------LDGPVDVIYPGSKVPEWLMYRTTEASVTVDFSSAPKSK-FVG 988

Query: 931  FAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLG----YNSRYIEDLIDSDR 986
            F FC V      D   F         D  ++T +  K V LG    + S +  +   SD 
Sbjct: 989  FIFCVVAGQLPSDDKNF------IGCDCYLETGNGEK-VSLGSMDTWTSIHSSEFF-SDH 1040

Query: 987  VILGFKP--CLNVGFPD--------GYHHTIATFKFFAE-------RKFYKIKRCGLCPV 1029
            + + +    CL    P+          +    +F+FFA+       R+   I+ CG+CP+
Sbjct: 1041 IFMWYDELCCLQNSKPEKENMDELMASYIPKVSFEFFAQSGNTWKKRENNMIRGCGVCPI 1100

Query: 1030 Y 1030
            Y
Sbjct: 1101 Y 1101


>gi|359496032|ref|XP_003635136.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1050

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 312/1055 (29%), Positives = 462/1055 (43%), Gaps = 230/1055 (21%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S  V +VGIWGMGGIGKTTLA+ I+++   +FEG CF+  ++  S     +++L+ ++LS
Sbjct: 197  STKVLMVGIWGMGGIGKTTLARVIYERLFCQFEGYCFLEGLKSTS-----MDNLKAELLS 251

Query: 64   TTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
              L  K + +   +I    K R+   K+L+V+DDVN    L+ L+G  D FG  SRI++T
Sbjct: 252  KVLGNKNINMGLTSI----KARLHSKKVLLVIDDVNHQSMLETLVGGHDWFGPQSRIIIT 307

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            TRDK +L   +G +  +Y+V  LE +   +                      + SY +G 
Sbjct: 308  TRDKHLL-TVQGVDV-VYKVQKLEDDNLLDQ---------------------ITSYAQGL 344

Query: 183  PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
            PL L+VLG SLC +   +W  +L+ L +    EI ++   L+ISF  L    K IFLDIA
Sbjct: 345  PLALKVLGCSLCDRNADYWTDMLNQLKKFPNEEIQEV---LQISFRGLKDNEKDIFLDIA 401

Query: 243  CFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQE 298
            CFF G  K FV  IL+     V   ++ LIDKSL++++  N L MHD+LQEMG QIVR+ 
Sbjct: 402  CFFRGRGKTFVRKILESCGFTVVSGIENLIDKSLITLTRDNRLEMHDLLQEMGWQIVRKT 461

Query: 299  SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
            S KEPGKRSRLW+ K+IS +LK   G   +EGIF +LS ++ +N   +AF+ M+NLRL +
Sbjct: 462  S-KEPGKRSRLWEQKDISHILKWETGAQEVEGIFFNLSGLEEMNFTTKAFSQMTNLRLLE 520

Query: 359  FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
             Y     +        T  ++   K+ + +   +   +LRYLHWD YP  +LPS+F+ +N
Sbjct: 521  IYRSNLRD--------TGGKMQ-CKLHISDDFKFHYDELRYLHWDEYPCESLPSDFESEN 571

Query: 419  LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
            LV   +  S + Q W+G+K         F +L  +     Q L+  P           +F
Sbjct: 572  LVHFCMPRSHLTQLWKGQKV--------FGHLEFVDVSYSQYLKKTP-----------DF 612

Query: 479  SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
            S   NL                                 EVL L+GC  L+++  S   L
Sbjct: 613  SRATNL---------------------------------EVLVLKGCTNLRKVHPSLGYL 639

Query: 539  RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
              L+ L +  C+NL          EHL               S   L  L    +  CSK
Sbjct: 640  SKLILLNMENCINL----------EHLP--------------SIRWLVSLRTFILSGCSK 675

Query: 599  LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
            L+ L +    + YL  +    +AI+       L N   +  +  C               
Sbjct: 676  LEKLQEVPQHMPYLSKLCLDGTAITDFSGWSELGNFQENSGNLDC--------------- 720

Query: 659  AMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
             +  L+  D  +R+       L           N  + P+   + S  RFI         
Sbjct: 721  -LSELNSDDSTIRQQHSSSVVL----------RNHNASPSSAPRRS--RFIS-------- 759

Query: 719  SLPELPLC-LKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDC 777
              P   L  L YL+L    ++     LP+ LE L +               L+ L L +C
Sbjct: 760  --PHCTLTSLTYLNLSGTSIIH----LPWNLERLSM---------------LKRLELTNC 798

Query: 778  NMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLK 837
              L++LP LP  ++ +   NC  L+ +                           +P+S+ 
Sbjct: 799  RRLQALPVLPSSIECMNASNCTSLELI---------------------------SPQSVF 831

Query: 838  SAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVL 897
                 F F NC KL    ++K+  D      H    + R  Y  AI      +  S  V 
Sbjct: 832  KRFGGFLFGNCFKLR-NCHSKMEHDVQSVASHAVPGTWRDTY--AIWHPNVAIPFS-TVF 887

Query: 898  PGSEIPDWFSNQSSGSSICIQLPPHSSCR-NLIGFAFCAVLDSKKVDSDCFRYFYVSFQF 956
            PGSEIPDWF + S G  I I++PP      N +GFA  AV+ + + DS   R + +    
Sbjct: 888  PGSEIPDWFRHHSQGHEINIEVPPDWYINSNFLGFALSAVM-APQHDS---RAWCMYCDL 943

Query: 957  DLEIKTLSETKHVDLGYNSRYIEDL----IDSDRVILGFKPCLNVGFPDGYHHTIATFKF 1012
            D      +   H    +   +   L    I+SD V L + P       + + H     KF
Sbjct: 944  DTHDLNSNSNSHRICSFFGSWTYQLQRTPIESDHVWLAYVPSFFSFSREKWSH----IKF 999

Query: 1013 -FAERKFYKIKRCGLCPVY-ANPSETKDNTFTINF 1045
             F+      +K CG CPVY    S+  D +  I F
Sbjct: 1000 SFSSSGGCVVKSCGFCPVYIKGTSDEGDYSSGIAF 1034


>gi|359493406|ref|XP_002279885.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1351

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 313/1009 (31%), Positives = 481/1009 (47%), Gaps = 137/1009 (13%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
            + V++VGI+G GGIGKTT+AK ++++   +F G+ F+ DV+  S+    LE LQKQ+L  
Sbjct: 211  NDVRVVGIYGTGGIGKTTIAKIVYNEIQCQFSGASFLQDVKERSKNGCQLE-LQKQLLRG 269

Query: 65   TLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
             L + +  +  N   +  + R+   K+LIV+DDV+ + QL+ L      FG GSRI++TT
Sbjct: 270  ILGKDIAFSDINEGINIIQGRLGSKKILIVIDDVDHLKQLESLAKSPKWFGPGSRIIITT 329

Query: 124  RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
            RD+ +L ++       YRV  L ++EA + F  +AFK+N   ED    S  +V Y +G P
Sbjct: 330  RDQHLLGEYGVNIP--YRVTELHYKEALQLFSRYAFKQNVPKEDYVDFSNCMVDYAQGLP 387

Query: 184  LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
            L L+VLGSSL       W      L+R+ ++ + +I D+L+ISF+ L    K +FLDIA 
Sbjct: 388  LALKVLGSSLHGMTIDEWRSA---LDRLKKNPVKEINDVLRISFDGLDNLEKDVFLDIAW 444

Query: 244  FFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
            FF+ E KDFV+ ILD      +  + IL DK L++IS N + MHD++++MG  IVR E  
Sbjct: 445  FFKKECKDFVSRILDGCNLFATHGITILHDKCLITISDNIIQMHDLIRQMGWAIVRDEYP 504

Query: 301  KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINL-DPRAFTNMSNLRLFKF 359
             +P K SRLWD  +I       +           L K+K I+L D +    M        
Sbjct: 505  GDPSKWSRLWDVDDIYDAFSRQEF----------LGKLKVIDLSDSKQLVKM-------- 546

Query: 360  YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT-YPLRTLPSNFKPKN 418
              PKF  +  L  ++ E  +S  ++ L  G D   K+L YL+      L++ P   K ++
Sbjct: 547  --PKFSSMPNLERLNLEGCISLRELHLSIG-DL--KRLTYLNLGGCEQLQSFPPGMKFES 601

Query: 419  LVELNL-RCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI- 476
            L  L L RC  +++         P    N  +L  L     + ++  PS++ ++  + + 
Sbjct: 602  LEVLYLDRCQNLKK--------FPKIHGNMGHLKELYLNKSE-IKELPSSIVYLASLEVL 652

Query: 477  NFSYCVNLIEFPQISGKVT---------------------------RLYLGQSAIEEVPS 509
            N S C NL +FP+I G +                             L+LG+S I+E+PS
Sbjct: 653  NLSNCSNLEKFPEIHGNMKFLRELHLEGCSKFEKFSDTFTYMEHLRGLHLGESGIKELPS 712

Query: 510  SIECLTDLEVLDLRGCKR-----------------------LKRISTSFCKLRSLVTLIL 546
            SI  L  LE+LDL  C +                       +K +  S   L SL  L L
Sbjct: 713  SIGYLESLEILDLSYCSKFEKFPEIKGNMKCLKELYLDNTAIKELPNSMGSLTSLEILSL 772

Query: 547  LGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNI 606
              CL  E F +I   M  L+ +Y   + I ELP+S   L  LE+L +  CS     P+  
Sbjct: 773  KECLKFEKFSDIFTNMGLLRELYLRESGIKELPNSIGYLESLEILNLSYCSNFQKFPEIQ 832

Query: 607  GSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAM------ 660
            G+L+ L  +    +AI +LP+ +     L SL  S C   E FP   +  L A+      
Sbjct: 833  GNLKCLKELCLENTAIKELPNGIGCLQALESLALSGCSNFERFPEIQMGKLWALFLDETP 892

Query: 661  ------GLLHISDYA---------VREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMS 704
                   + H++            +R +P  I  L SLE L L+G +N E+   I + M 
Sbjct: 893  IKELPCSIGHLTRLKWLDLENCRNLRSLPNSICGLKSLERLSLNGCSNLEAFSEITEDME 952

Query: 705  QLRFIHLEDFNM--LQSLPELPLCLKYLHLIDCKMLQSLPVLP---FCLESLDLTGCNML 759
            +L  + L +  +  L SL      L+ L LI+C+ L +LP       CL +L +  C  L
Sbjct: 953  RLEHLFLRETGITELPSLIGHLRGLESLELINCENLVALPNSIGSLTCLTTLRVRNCTKL 1012

Query: 760  RSLPE----LPLCLQYLNLEDCNMLRS-LPELPLCLQLLTVRNC--NRLQSLPEILLCLQ 812
            R+LP+    L  CL +L+L  CN++   +P    CL LL   +   N ++ +P  +  L 
Sbjct: 1013 RNLPDNLRSLQCCLLWLDLGGCNLMEGEIPSDLWCLSLLVSLDVSENHIRCIPAGITQLS 1072

Query: 813  ELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAI 872
            +L A  +     H P L+   E + S+    E   C  L  +  + +L  SLL+     I
Sbjct: 1073 KLKALFM----NHCPMLEEIGE-VPSSLTVMEAHGCPSLETETFSSLLWSSLLKRFKSPI 1127

Query: 873  ASLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLP 920
                      ++      R S++ LPGS  IP+W S+Q  G  + I+LP
Sbjct: 1128 QPEFFEPNFFLDLDFYPQRFSIL-LPGSNGIPEWVSHQRMGCEVSIELP 1175


>gi|357504435|ref|XP_003622506.1| TMV resistance protein N [Medicago truncatula]
 gi|355497521|gb|AES78724.1| TMV resistance protein N [Medicago truncatula]
          Length = 1137

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 251/775 (32%), Positives = 386/775 (49%), Gaps = 110/775 (14%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+ +++   +EF+ SCF++++R        L H+Q ++LS      L +   +  +
Sbjct: 233 KTTIARLVYEAIKNEFKVSCFLANIRETVSKTDNLAHIQMELLS-----HLNIRSNDFYN 287

Query: 80  FTKER------VRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFR 133
               +          K+L+VLDDV+E+ QL+ L G+ + FG GSR+++T+RDK +L    
Sbjct: 288 VHDGKKILANSFNNKKVLLVLDDVSELSQLENLAGKQEWFGPGSRVIITSRDKHLLMTHG 347

Query: 134 GEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSL 193
             E   Y+  GL   EA + FC  AFKE    E+     + VV YT+G PL LEVLGS L
Sbjct: 348 VHE--TYKAKGLVKNEALKLFCLKAFKEIQPKEEYLSLCKEVVEYTRGLPLALEVLGSHL 405

Query: 194 CLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFV 253
             +    W   L  +      +IHD    LKIS++ L    K++FLDIACFF+G D D V
Sbjct: 406 HGRTVEVWHSALEQIRSGPHYKIHDT---LKISYDSLQSMEKNLFLDIACFFKGMDIDEV 462

Query: 254 ASILDDSESDV---LDILIDKSLVSI--SGNFLNMHDILQEMGRQIVRQESEKEPGKRSR 308
             IL+         +DILI++SL ++    N L MHD+LQEMGR IV +ES  +PGKRSR
Sbjct: 463 IEILEGCGYHPKIGIDILIERSLATLDRGDNKLWMHDLLQEMGRNIVFEESPNDPGKRSR 522

Query: 309 LWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIE 368
           LW  K++ +VL+ NKGTD I+GI +DL +    +    AF+ +S LRL K          
Sbjct: 523 LWSQKDVDQVLRQNKGTDKIQGIAMDLVQPYEASWKIEAFSKISQLRLLKL--------- 573

Query: 369 KLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSK 428
                         +++LP GL+  P  LR L W   PLRTLP       +V + L  SK
Sbjct: 574 -------------CEIKLPLGLNRFPSSLRVLDWSGCPLRTLPLTNHLVEIVAIKLYRSK 620

Query: 429 VEQPWEGEK----------------------ACVPS-----------------SIQNFKY 449
           +EQ W G +                        VP+                 S+ + K 
Sbjct: 621 IEQLWHGTQFLENLKSINLSFSKSLKRSPDFVGVPNLEFLVLEGCTSLTEIHPSLLSHKK 680

Query: 450 LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV---NLIEFPQISGKVTRLYLGQSAIEE 506
           L+ L+ K C+ L++ P  +       ++ S C    +L EF +    +++L L ++AI++
Sbjct: 681 LALLNLKDCKRLKTLPCKIEMSSLKGLSLSGCCEFKHLPEFDETMENLSKLSLEETAIKK 740

Query: 507 VPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLK 566
           +PSS+  L  L  LDL  CK L  +  +  +L+SL+ L + GC  L  FPE L++M+ L+
Sbjct: 741 LPSSLGFLVSLLSLDLENCKNLVCLPNTVSELKSLLILNVSGCSKLHSFPEGLKEMKSLE 800

Query: 567 RIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAIS-QL 625
            ++++ T I ELPSS   L  L+V+    C        N   L +  ++         +L
Sbjct: 801 ELFANETSIEELPSSVFFLENLKVISFAGCKGPVTKSVNTFLLPFTQFLGTPQEPNGFRL 860

Query: 626 PSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEI 685
           P  + L + LR+L+ S+C                       + +   +P++ + LSSL +
Sbjct: 861 PPKLCLPS-LRNLNLSYC-----------------------NLSEESMPKDFSNLSSLVV 896

Query: 686 LYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           L LSGNNF   P+ I ++ +L ++ L    MLQ  PE P  ++ L   +C  L++
Sbjct: 897 LNLSGNNFVRPPSSISKLPKLEYLRLNCCEMLQKFPEFPSSMRLLDASNCASLET 951


>gi|51477389|gb|AAU04762.1| MRGH21 [Cucumis melo]
          Length = 1020

 Score =  343 bits (879), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 250/755 (33%), Positives = 390/755 (51%), Gaps = 103/755 (13%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V+ +GIWGM GIGKTT+A+ I+   SH F+G  F+ +V+  +    G+  LQ+++L+ 
Sbjct: 235 DDVRFIGIWGMSGIGKTTIARIIYKSVSHLFDGCYFLDNVK-EALKKEGIASLQQKLLTG 293

Query: 65  TLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
            L ++ +++   +     K R+  +K LI+LDDV+ V QL++L G LD FG GSR++VTT
Sbjct: 294 ALMKRNIDIPNADGATLIKRRISNIKALIILDDVDNVSQLRQLAGSLDWFGSGSRVIVTT 353

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           + + +L    G E++ Y V  L+ +E  + F   AF E++  E        VV Y  G P
Sbjct: 354 KHEDILVS-HGIERR-YNVEVLKIDEGIQLFSQKAFGEDYPKEGYFDLCSQVVDYAGGLP 411

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L +EVLGSSL  K    W   +  L  + + EI+   + LKIS+  L    + IFLDIAC
Sbjct: 412 LAIEVLGSSLRNKPMEDWIDAVKKLWEVRDKEIN---EKLKISYYMLENDDREIFLDIAC 468

Query: 244 FFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
           FF+ + K     IL+         LDIL +KSL++     + MHD++QEMG++IV +E  
Sbjct: 469 FFKRKSKRRAIEILESFGFPAVLGLDILKEKSLITTPHEKIQMHDLIQEMGQKIVNEEFP 528

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
            EP KRSRLW  ++I+R L  ++GT+ IEGI +DL +    +L+ ++F++M+NLR+ K  
Sbjct: 529 DEPEKRSRLWLREDINRALSRDQGTEEIEGIMMDLDEEGESHLNAKSFSSMTNLRVLKL- 587

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                                + V L   ++YL  +LR+L+W  YPL+TLPSNF P NL+
Sbjct: 588 ---------------------NNVHLCEEIEYLSDQLRFLNWHGYPLKTLPSNFNPTNLL 626

Query: 421 ELNLRCSKVEQPWEGEK----------------------ACVPS---------------- 442
           EL L  S +   W   K                      + VP+                
Sbjct: 627 ELELPNSSIHLLWTTSKSMETLKVINLSDSQFLSKTPDFSVVPNLERLVLSGCVELHQLH 686

Query: 443 -SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT---RLY 498
            S+ N K+L  L  + C+ L + P N+       +  S C +L  FP+IS  +     L+
Sbjct: 687 HSLGNLKHLIQLDLRNCKKLTNIPFNICLESLKILVLSGCSSLTHFPKISSNMNYLLELH 746

Query: 499 LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
           L +++I+ + SSI  LT L VL+L+ C  L ++ ++   L SL TL L GC  L+  PE 
Sbjct: 747 LEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCSKLDSLPES 806

Query: 559 LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
           L  +  L+++    T + + P SF+ L  LE+L   +C  L        S ++L+ +   
Sbjct: 807 LGNISSLEKLDITSTCVNQAPMSFQLLTKLEIL---NCQGL--------SRKFLHSLFPT 855

Query: 619 ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV--REIPQE 676
                         N  R   S++ +GL      F  G S + +L++SD  +   ++P +
Sbjct: 856 W-------------NFTRKF-SNYSQGLR-VTNWFTFGCS-LRILNLSDCNLWDGDLPND 899

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
           +  L+SL+IL+LS N+F  LP  I  +  LR + L
Sbjct: 900 LHSLASLQILHLSKNHFTKLPESICHLVNLRDLFL 934



 Score = 43.9 bits (102), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 73/273 (26%)

Query: 631 LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
           LS+ LR L+  H   L++ P  F    +   LL +      E+P      SS+ +L+ + 
Sbjct: 599 LSDQLRFLNW-HGYPLKTLPSNF----NPTNLLEL------ELPN-----SSIHLLWTTS 642

Query: 691 NNFESLPAIIKQMSQLRFI-HLEDFNMLQSLPELPLC--------------LKYLHLIDC 735
            + E+L  I   +S  +F+    DF+++ +L  L L               LK+L  +D 
Sbjct: 643 KSMETLKVI--NLSDSQFLSKTPDFSVVPNLERLVLSGCVELHQLHHSLGNLKHLIQLDL 700

Query: 736 KMLQSLPVLPF--CLESLD---LTGCNMLRSLPELPLCLQYL------------------ 772
           +  + L  +PF  CLESL    L+GC+ L   P++   + YL                  
Sbjct: 701 RNCKKLTNIPFNICLESLKILVLSGCSSLTHFPKISSNMNYLLELHLEETSIKVLHSSIG 760

Query: 773 --------NLEDCNMLRSLPELP---LCLQLLTVRNCNRLQSLPEILLCLQELDASVLEK 821
                   NL++C  L  LP        L+ L +  C++L SLPE L      + S LEK
Sbjct: 761 HLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCSKLDSLPESL-----GNISSLEK 815

Query: 822 LSKHSPDLQWAPESLKSAAICFEFTNCLKLNGK 854
           L   S  +  AP S +      E  NC  L+ K
Sbjct: 816 LDITSTCVNQAPMSFQ-LLTKLEILNCQGLSRK 847


>gi|357468519|ref|XP_003604544.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505599|gb|AES86741.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1087

 Score =  343 bits (879), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 241/624 (38%), Positives = 341/624 (54%), Gaps = 69/624 (11%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS D V+IVGIWGMGGIGKTTLA+ +F Q   E+EG CF+ ++R  S   G L  L+++
Sbjct: 251 LDSQD-VRIVGIWGMGGIGKTTLAEEVFHQLQTEYEGCCFLENIREESAKHGML-FLKEK 308

Query: 61  MLSTTLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           + S  L E ++V   N +PH+ K R+ RMK LIVLDDVN+  Q++ L G+ D FG GSR+
Sbjct: 309 LFSALLDEDVKVDTANRLPHYVKTRISRMKALIVLDDVNDFDQMEILAGDHDLFGFGSRV 368

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TTRDK++L +   +   IY V  L+F+++ E F   AFK      +    ++ VV+Y 
Sbjct: 369 IITTRDKQMLSQ---DVDDIYEVGALDFDKSLELFNLNAFKVKELEIEYYELTKRVVNYA 425

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           KG PLVL+VL   L  K K  W   L  L ++   ++    D+ ++S++ L  + K IF 
Sbjct: 426 KGIPLVLKVLAHLLRGKDKLVWESQLDKLKKMPSKKVQ---DVTRLSYDDLDRKEKKIFS 482

Query: 240 DIACFFEGED--KDFVASILDDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEMG 291
           D+ACFF G +   D++  +L DSESD      L+ L DK L+S S  N ++MHDI+QEMG
Sbjct: 483 DLACFFNGSNLKVDYIKFLLKDSESDNSVASGLERLKDKGLISFSKDNVISMHDIIQEMG 542

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IVRQES  +PG  SRLWD  ++  VLK++ GT+AI  I++ L  ++ + L P  F NM
Sbjct: 543 REIVRQESNGDPGSCSRLWDD-DVYEVLKNDTGTEAIRSIWMQLPTLRKLKLSPSTFANM 601

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NL+    YVP           ST +Q  +    LP GL  LP +LRYL W  YPL++LP
Sbjct: 602 RNLQF--LYVP-----------STCDQDGFD--LLPQGLHSLPPELRYLSWMHYPLKSLP 646

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
             F  + LV L+L  S+VE+ W G        +QN   L  +     + L+  P      
Sbjct: 647 DEFSAEKLVILDLSYSRVEKLWHG--------VQNLLNLKEVKLFFSRYLKELP------ 692

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
                +FS  +NL        +V  ++   S +  V  SI  L  LE LDL  C  L  +
Sbjct: 693 -----DFSKALNL--------EVLDIHFC-SQLTSVHPSILSLEKLEKLDLSHCTSLTEL 738

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
            TS     SL  L L  C N+  F      M  L   Y   T +  LP+SF     LE+L
Sbjct: 739 -TSDTHTSSLRYLNLKFCKNIRKFSVTSVNMTELDLRY---TQVNTLPASFGCQSKLEIL 794

Query: 592 FVEDCSKLDNLPD---NIGSLEYL 612
            + +CS ++N P    N+  L+YL
Sbjct: 795 HLGNCS-IENFPSCFKNLIKLQYL 817



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 177/407 (43%), Gaps = 62/407 (15%)

Query: 579 PSSFENLPGLEVLFVE---DCSKLDNLPDNIGSLE-YLYYILAAASAISQLPSSVALSNM 634
           PS+F N+  L+ L+V    D    D LP  + SL   L Y+      +  LP   +   +
Sbjct: 595 PSTFANMRNLQFLYVPSTCDQDGFDLLPQGLHSLPPELRYLSWMHYPLKSLPDEFSAEKL 654

Query: 635 LRSLDSSHCK------GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYL 688
           +  LD S+ +      G+++     LL L  + L   S Y ++E+P    +  +L +  L
Sbjct: 655 V-ILDLSYSRVEKLWHGVQN-----LLNLKEVKLF-FSRY-LKELPD---FSKALNLEVL 703

Query: 689 SGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL-----CLKYLHLIDCKMLQSLPV 743
             +    L ++   +  L  +   D +   SL EL        L+YL+L  CK ++   V
Sbjct: 704 DIHFCSQLTSVHPSILSLEKLEKLDLSHCTSLTELTSDTHTSSLRYLNLKFCKNIRKFSV 763

Query: 744 LPFCLESLDLTGCNMLRSLPELPLC---LQYLNLEDCNMLRSLPELPLC------LQLLT 794
               +  LDL     + +LP    C   L+ L+L +C    S+   P C      LQ L 
Sbjct: 764 TSVNMTELDLR-YTQVNTLPASFGCQSKLEILHLGNC----SIENFPSCFKNLIKLQYLE 818

Query: 795 VRNCNRLQSLP------EILLCLQELDA--SVLEKLSKHSPDLQWAPESLKSAAICFEFT 846
           VR C +LQ+LP      EILL  QE  A  +VL       P +    E  K       F 
Sbjct: 819 VRYCQKLQNLPVLPPSLEILLA-QECTALKTVL------FPSI---AEQFKENRKRVVFA 868

Query: 847 NCLKLNGKANNKILADSLLRIRHMA---IASLRLGYEMAINE-KLSELRGSLIVLPGSEI 902
           NCLKL+  +   I+ ++ + I   A   +++ R  +    N     +   +L V PGS +
Sbjct: 869 NCLKLDEHSLANIVFNAQINITKFAYQHVSASRDEFHNKFNNYNEDDSHQALYVYPGSCV 928

Query: 903 PDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRY 949
           PDWF  +++   + I LP  +S    +G+ FC VL   ++  D  ++
Sbjct: 929 PDWFEYKTTTDYVAIDLPSSTSHSRFLGYIFCFVLGGNRLIVDMLKF 975


>gi|105922306|gb|ABF81409.1| TIR-NBS-NBS-LRR type disease resistance protein [Populus trichocarpa]
 gi|105922325|gb|ABF81410.1| TIR-NBS-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1778

 Score =  343 bits (879), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 296/939 (31%), Positives = 442/939 (47%), Gaps = 217/939 (23%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
            KTT+A+ ++D+   +F+GSCF+++VR       G   LQ+Q+LS  +S +L  A  +   
Sbjct: 730  KTTVARVMYDRIRWQFQGSCFLANVREVFAEKDGRCRLQEQLLSE-ISMELPTARDSSRR 788

Query: 80   --FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
                K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+R+K VL+       
Sbjct: 789  IDLIKRRLRLKKVLLILDDVDDEEQLQMLAAEHGSFGPGSRIIITSRNKHVLDSH--GVT 846

Query: 138  KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
            +IY  + L  ++A   F   AFK +   EDL+  S+ VV Y  G PL LEV+GS L  + 
Sbjct: 847  RIYEADKLNDKDALMLFSWKAFKRDQPAEDLSELSKQVVGYANGLPLALEVIGSFLHKRG 906

Query: 198  KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
               W   +  +N I + +I    D+L+ISF+ L    K IFLDIACF +G  KD +A +L
Sbjct: 907  LREWKSAIDRMNDIPDRKI---IDVLRISFDGLHELEKKIFLDIACFLKGMKKDRIARLL 963

Query: 258  DDS--ESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
            D     +D+ +  LI+KSL+S+S + + MH++LQ+MG +IVR ES +EPG+RSRL   K+
Sbjct: 964  DSCGFHADIGMQALIEKSLISVSRDEIRMHNLLQKMGEEIVRCESPEEPGRRSRLCTYKD 1023

Query: 315  ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
            +   L+ +  T+ I+ IFLDL K K    +  AF+ M+ LRL K +              
Sbjct: 1024 VCDALEDS--TEKIQSIFLDLPKAKEAQWNMTAFSKMTKLRLLKIH-------------- 1067

Query: 375  TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
                     V L  G +YL K+LR+L W  YP ++LP+ F+P  LVEL + CS +EQ W 
Sbjct: 1068 --------NVDLSEGPEYLSKELRFLEWHAYPSKSLPACFRPDELVELYMSCSSIEQLWC 1119

Query: 435  GEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
            G K  V     N K                           IN S  + LI  P  +G  
Sbjct: 1120 GCKILV-----NLK--------------------------IINLSNSLYLINTPDFTG-- 1146

Query: 495  TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
                               + +LE L L GC  L  +  SF + + L  + L+ C +L  
Sbjct: 1147 -------------------IPNLESLILEGCASLSEVHPSFGRHKKLQLVNLVNCYSLRI 1187

Query: 555  FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
             P  LE                        +  LEV  +  CSKLD  PD +G++  L  
Sbjct: 1188 LPSNLE------------------------MESLEVCTLSSCSKLDKFPDIVGNINCLRE 1223

Query: 615  ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREI 673
            +    +AI++L SS      L  L  ++CK LES P + + GL ++  L +SD + ++ I
Sbjct: 1224 LRLDGTAIAKLSSSFHCLAGLVLLSMNNCKNLESIPSS-IRGLKSLKRLDVSDCSELKNI 1282

Query: 674  PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI 733
            P+ +  + SLE    SG +    P                F +L++L       K L   
Sbjct: 1283 PENLGEVESLEEFDASGTSIRQPPT--------------SFFLLKNL-------KVLSFK 1321

Query: 734  DCKML------QSLPVLP-FC-LESLDLTGCNMLR-SLPELPLC---------------- 768
             CK +      Q LP L   C LE LDL  CN+   ++PE   C                
Sbjct: 1322 GCKRIAVNLTDQILPSLSGLCSLEELDLCACNLGEGAVPEDIGCLSSLRSLNLSRNNFIS 1381

Query: 769  ----------LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPE-ILLCLQELDAS 817
                      L+ L L+DC ML SLPE+PL +Q + +  C +L+ +P+ I LC       
Sbjct: 1382 LPKSINQLSRLEKLALKDCVMLESLPEVPLKVQKVKLDGCLKLKEIPDPIKLC------- 1434

Query: 818  VLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKL---NGKANNKILADSLLRIRHMAIAS 874
                             SLK +   F+  NC +L   NG+ N   +  ++L  +++  +S
Sbjct: 1435 -----------------SLKRSE--FKCLNCWELYMHNGQNN---MGLNMLE-KYLQGSS 1471

Query: 875  LRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGS 913
             R G+ +A+              PG+EIP WF++QS  S
Sbjct: 1472 PRPGFGIAV--------------PGNEIPGWFTHQSCNS 1496



 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 160/417 (38%), Positives = 237/417 (56%), Gaps = 35/417 (8%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+ ++D+   +F GSCF+++VR       GL  LQ+Q+LS  +S +L  A  +   
Sbjct: 280 KTTVARVLYDRIRWQFGGSCFLANVREVFAEKDGLCRLQEQLLSE-ISMELPTARDSSRR 338

Query: 80  --FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
               K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+R+K VL+       
Sbjct: 339 IDLIKRRLRLKKVLLILDDVDDEEQLQMLAAEHGTFGPGSRIIITSRNKHVLDSH--GVT 396

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           +IY  + L  ++A   F   AFK +   EDL+  S+ VV Y  G PL LEV+GS L  + 
Sbjct: 397 RIYEADKLNDKDALMLFSWKAFKRDQPAEDLSELSKQVVGYANGLPLALEVIGSFLHKRG 456

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W   +  +N I + +I    D+L+ISF+ L    K IFLDIACF +G  KD +  +L
Sbjct: 457 LREWKSAIDRMNDIPDRKI---IDVLRISFDGLHELEKKIFLDIACFLKGMKKDRITRLL 513

Query: 258 DDS--ESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
           D     +D+ +  LI+KSL+ +S + + MH++LQ+MG +IVR ES +EPG+RSRL   K+
Sbjct: 514 DSCGFHADIGMQALIEKSLIRVSRDEIRMHNLLQKMGEEIVRCESPEEPGRRSRLCTYKD 573

Query: 315 ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
           +   LK + G   IE IF+DL K K    +  AF+ M+ LRL K +              
Sbjct: 574 VCDALKDSTGK--IESIFVDLPKAKEAPWNMTAFSKMTKLRLLKIH-------------- 617

Query: 375 TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
                    V L  G +YL  +LR+L W  YP ++LP+ F+  +LVEL + CS +EQ
Sbjct: 618 --------NVDLSEGPEYLSNELRFLEWHAYPSKSLPACFRLDDLVELYMSCSSIEQ 666


>gi|359493570|ref|XP_002270429.2| PREDICTED: uncharacterized protein LOC100253289 [Vitis vinifera]
          Length = 2663

 Score =  343 bits (879), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 256/726 (35%), Positives = 375/726 (51%), Gaps = 107/726 (14%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNS-ETAGGLEHLQKQMLS 63
           + V++VG++G+GGIGKTT+  A++++ S++FE    ++DVR  S E +GGL  LQ+Q+L+
Sbjct: 216 NDVRMVGVYGLGGIGKTTIINALYNRISNQFESVSLLTDVRKESTENSGGLLKLQQQLLN 275

Query: 64  TTLSEKLEVAGPNIPHFTKE---RVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             L    ++   N+    KE   ++   ++L+ LDDV+E+ QL+ LIG+ + FG GSRI+
Sbjct: 276 DILGTTRKIVLRNVHEGIKEIRDKLSSKRVLVFLDDVDELTQLEHLIGKHNWFGPGSRII 335

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTR K +L +    E K+Y V  L F EA + FC +AFK++H  E     S  VV Y  
Sbjct: 336 ITTRKKDLLTR---HEMKMYEVEKLNFHEALQLFCLYAFKQHHLKEGYGDLSHQVVRYAD 392

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL L+VLGS L  KR S W   L  L ++   EI     +LKISF+ L    K IFLD
Sbjct: 393 GLPLALKVLGSLLFGKRLSDWKSELRKLGKVPNMEI---VKVLKISFDGLDYTQKMIFLD 449

Query: 241 IACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI-SGNFLNMHDILQEMGRQIVR 296
           IACFF+G D + V+ ILD S  +    +++L+D+  ++I   N ++MHD+L +MG+ IV 
Sbjct: 450 IACFFQGGDVEAVSRILDGSGCEAESGINVLVDRCFITILEDNTIDMHDLLAQMGKGIVD 509

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
           +E   EPG+RSRLW   +I RVLK N GT+ IEGIF  +   + I    +AF  M+ LRL
Sbjct: 510 EECPNEPGERSRLWRHTDIYRVLKRNTGTEKIEGIFFHMDTSEQIQFTCKAFKRMNRLRL 569

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKV-QLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
                                 LS++ + QLP    +    L  L WD Y L +LP NF 
Sbjct: 570 LI--------------------LSHNCIEQLPEDFVFPSDDLTCLGWDGYSLESLPPNFH 609

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
           P +LV L L  S +++ W+G        ++N +Y   ++    Q L   P+  +      
Sbjct: 610 PNDLVFLGLSNSNIKRLWKGNMC-----LRNLRY---INLNDSQQLIELPNFSNVPNLEE 661

Query: 476 INFSYCV---------------NLIEFPQIS---GKVTRLYLGQSAIEEVPSSIECLTDL 517
           +N S C+                L  FP+I    GK+ RL L  +AI+E+PSSIE L  L
Sbjct: 662 LNLSGCIILLKVHTHIRVFGCSQLTSFPKIKRSIGKLERLSLDNTAIKELPSSIELLEGL 721

Query: 518 EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
             L L  CK L+ +  S C LR L  L L GC  L+  PE LE+M               
Sbjct: 722 RNLYLDNCKNLEGLPNSICNLRFLEVLSLEGCSKLDRLPEDLERM--------------- 766

Query: 578 LPSSFENLPGLEVLFVEDCS-KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
                   P LEVL +   S +L +L +  G+L  +         ISQL +       LR
Sbjct: 767 --------PCLEVLSLNSLSCQLPSLSEEGGTLSDMLV------GISQLSN-------LR 805

Query: 637 SLDSSHCKGLESFPR-----TFLLGLSAMGL----LHISDYAVREIPQEIAYLSSLEILY 687
           +LD SHCK +   P        L   S++G     +H     ++   +++ Y SS  +++
Sbjct: 806 ALDLSHCKKVSQIPELPSSLRLLDMHSSIGTSLPPMHSLVNCLKSASEDLKYKSSSNVVF 865

Query: 688 LSGNNF 693
           LS + F
Sbjct: 866 LSDSYF 871



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 138/257 (53%), Gaps = 27/257 (10%)

Query: 511  IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYS 570
            IEC ++ + L LR CK L+ + TS  + +SL +L    C  L++FPEILE ME+L++++ 
Sbjct: 1645 IECASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSDCSQLQYFPEILENMENLRQLHL 1704

Query: 571  DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSV 629
            + T I ELPSS E+L  L+VL +E C  L  LP++I +L +L  + +   S + +LP ++
Sbjct: 1705 NGTAIKELPSSIEHLNRLQVLNLERCKNLVTLPESICNLRFLEDLNVNYCSKLHKLPQNL 1764

Query: 630  ALSNML-----RSLDSSHC-----------KGLESFPRTFLLG-----LSAMGLLHISDY 668
                 L     R L+S  C           K L+      + G     +  +  L + D 
Sbjct: 1765 GRLQSLKCLRARGLNSRCCQLLSLSGLCSLKELDLIYSKLMQGVVLSDICCLYSLEVVDL 1824

Query: 669  AV-----REIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL 723
             V       IP EI  LSSL+ L+L GN F S+PA I Q+S+LR + L +   L+ +P L
Sbjct: 1825 RVCGIDEGGIPTEICQLSSLQELFLFGNLFRSIPAGINQLSRLRLLVLGNCQELRQIPAL 1884

Query: 724  PLCLKYLHLIDCKMLQS 740
            P  L+ L +  CK L++
Sbjct: 1885 PSSLRVLDIHLCKRLET 1901



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/322 (35%), Positives = 169/322 (52%), Gaps = 37/322 (11%)

Query: 511  IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYS 570
            IE  ++ + L LR CK L+ + T   + +SL +L    C  L++FPEILE ME+L++++ 
Sbjct: 1087 IERASEFDTLCLRECKNLESLPTIIWEFKSLKSLFCSDCSQLQYFPEILETMENLRQLHL 1146

Query: 571  DRTPITELPSSFENLPGLEVL-------------------FVED-----CSKLDNLPDNI 606
            + T I ELPSS E L  L+VL                   F+ED     CSKL  LP N+
Sbjct: 1147 NGTAIKELPSSIERLNRLQVLNLGRCKNLVTLPESICNLRFLEDLNVNFCSKLHKLPQNL 1206

Query: 607  GSLEYLYYILAAA--SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLH 664
            G L+ L  + A    S   QL  S++    L+ LD  + K ++    + +  L ++ +L 
Sbjct: 1207 GRLQSLKRLRARGLNSRCCQL-LSLSGLCSLKELDLIYSKLMQGVVLSDICCLYSVEVLD 1265

Query: 665  ISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE 722
            +S   + E  IP EI  LSSL+ L L GN F S+PA I Q+S+LR + L +   L+ +P 
Sbjct: 1266 LSFCGIDEGGIPTEICQLSSLQELLLIGNLFRSIPAGINQLSRLRLLVLSNCQELRQIPV 1325

Query: 723  LPLCLKYLHLIDCKMLQSLPVLPFC------LESLDLTGCNMLRSLPELPLCLQYLNLED 776
            LP  L++L+L DC  L SLP    C      L  L+L+ C  L  +PELP  L+ L++  
Sbjct: 1326 LPSRLQHLNLADCSNLVSLPE-AICIIQLSKLRVLELSHCQGLLQVPELPPSLRVLDVHS 1384

Query: 777  CNMLRSLPELPLCLQLLTVRNC 798
            C  L  L   P CL  +++  C
Sbjct: 1385 CTCLEVLSS-PSCLLGVSLFKC 1405



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 179/434 (41%), Gaps = 89/434 (20%)

Query: 543  TLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNL 602
            TL L  C NLE  P I+ + + LK                        LF  DCS+L   
Sbjct: 1095 TLCLRECKNLESLPTIIWEFKSLKS-----------------------LFCSDCSQLQYF 1131

Query: 603  PDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGL 662
            P+ + ++E L  +    +AI +LPSS+   N L+ L+   CK L + P + +  L  +  
Sbjct: 1132 PEILETMENLRQLHLNGTAIKELPSSIERLNRLQVLNLGRCKNLVTLPES-ICNLRFLED 1190

Query: 663  LHISDYA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP 721
            L+++  + + ++PQ +  L SL+ L   G N      +                      
Sbjct: 1191 LNVNFCSKLHKLPQNLGRLQSLKRLRARGLNSRCCQLLSLSGLCSL-------------- 1236

Query: 722  ELPLCLKYLHLIDCKMLQSLPVLPFC----LESLDLTGC--------------------- 756
                  K L LI  K++Q + +   C    +E LDL+ C                     
Sbjct: 1237 ------KELDLIYSKLMQGVVLSDICCLYSVEVLDLSFCGIDEGGIPTEICQLSSLQELL 1290

Query: 757  ---NMLRSLP---ELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
               N+ RS+P        L+ L L +C  LR +P LP  LQ L + +C+ L SLPE +  
Sbjct: 1291 LIGNLFRSIPAGINQLSRLRLLVLSNCQELRQIPVLPSRLQHLNLADCSNLVSLPEAICI 1350

Query: 811  LQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKAN-NKILADSLLRIRH 869
            +Q     VLE    H   L   PE   S  +  +  +C  L   ++ + +L  SL +   
Sbjct: 1351 IQLSKLRVLEL--SHCQGLLQVPELPPSLRV-LDVHSCTCLEVLSSPSCLLGVSLFKCFK 1407

Query: 870  MAIASLRLGYEMAINE---KLSEL--RGSLIVLPGS-EIPDWFSNQSSGSSICIQLPPHS 923
              I  L+  Y+ + NE   + S+    G  IV+PGS  IP W  NQ  G+ I + LP + 
Sbjct: 1408 STIEDLK--YKSSSNEVFLRDSDFIGNGVCIVVPGSCGIPKWIRNQREGNHITMDLPQNC 1465

Query: 924  SCRN-LIGFAFCAV 936
               N  +G A C V
Sbjct: 1466 YENNDFLGIAICCV 1479



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 121/526 (23%), Positives = 203/526 (38%), Gaps = 98/526 (18%)

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
            LP+S      L+ LF  DCS+L   P+ + ++E L  +    +AI +LPSS+   N L+ 
Sbjct: 1665 LPTSIWEFKSLKSLFCSDCSQLQYFPEILENMENLRQLHLNGTAIKELPSSIEHLNRLQV 1724

Query: 638  LDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFES 695
            L+   CK L + P +   L  L  + + + S   + ++PQ +  L SL+ L   G N   
Sbjct: 1725 LNLERCKNLVTLPESICNLRFLEDLNVNYCS--KLHKLPQNLGRLQSLKCLRARGLNSRC 1782

Query: 696  LPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC----LESL 751
               +                            K L LI  K++Q + +   C    LE +
Sbjct: 1783 CQLLSLSGLCSL--------------------KELDLIYSKLMQGVVLSDICCLYSLEVV 1822

Query: 752  DLTGCNMLRSLPELPLC----LQYLNLEDCNMLRSLP----ELPLCLQLLTVRNCNRLQS 803
            DL  C +        +C    LQ L L   N+ RS+P    +L   L+LL + NC  L+ 
Sbjct: 1823 DLRVCGIDEGGIPTEICQLSSLQELFLFG-NLFRSIPAGINQLSR-LRLLVLGNCQELRQ 1880

Query: 804  LPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADS 863
            +P +   L+ LD  + ++L   S  L W+              NC K            S
Sbjct: 1881 IPALPSSLRVLDIHLCKRLET-SSGLLWS-----------SLFNCFK------------S 1916

Query: 864  LLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPH- 922
            L++     I  L   +           R +LI+     IPDW S+   G+ +  +LP + 
Sbjct: 1917 LIQDLECKIYPLEKPFA----------RVNLIISESCGIPDWISHHKKGAEVVAKLPQNW 1966

Query: 923  SSCRNLIGFA-FCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDL 981
                +L+GF  +C          +        F++ L ++          G+  ++++ L
Sbjct: 1967 YKNDDLLGFVLYCVYYPLDNESEETLENGATYFEYGLTLR----------GHEIQFVDKL 2016

Query: 982  IDSDRVILGFKPCL-NVGFP-----DGYH-----HTIATFKFFAERKFYKIKRCGLCPVY 1030
                   +   PC+  + +P     + YH        A+F  +   K  K++ CG+  +Y
Sbjct: 2017 QFYPSFHVYVVPCMWMIYYPKHEIEEKYHSNKWRQLTASFCGYLRGKAVKVEECGIHLIY 2076

Query: 1031 ANPSETKDNTFTINFATEV---WKLDDLPSASGTLDVEELELSPKR 1073
            A+  E       I+   E    W        SG   + E    PK+
Sbjct: 2077 AHDHEQNHGKAMISTEFECGSYWNKAIRVVISGNDGIPEWISQPKK 2122



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 2/124 (1%)

Query: 496  RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
            +L L    I  +P  IE  ++ + L LR CK L+ + TS  + +SL +L    C  L++F
Sbjct: 2530 KLCLKGQTINLLP--IEHASEFDTLCLRECKNLESLPTSIREFKSLKSLFGSDCSQLQYF 2587

Query: 556  PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
            PEILE ME+L+ ++ + T I ELPSS E+L  LE+L ++ C  L  LP +  +L +L  +
Sbjct: 2588 PEILENMENLRELHLNGTAIKELPSSIEHLNRLELLNLDRCQNLVTLPGSTCNLCFLEVL 2647

Query: 616  LAAA 619
               A
Sbjct: 2648 NVCA 2651



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 10/153 (6%)

Query: 426  CSKVEQPWEGEKACVPSS------IQNFKYLSALSFKGCQSLRSFPSNL-HFVCPVTINF 478
            C++ ++  E  K C+         I+       L  + C++L S P+ +  F    ++  
Sbjct: 1063 CAECQRNVEHRKLCLKCQTISLPPIERASEFDTLCLRECKNLESLPTIIWEFKSLKSLFC 1122

Query: 479  SYCVNLIEFPQI---SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF 535
            S C  L  FP+I      + +L+L  +AI+E+PSSIE L  L+VL+L  CK L  +  S 
Sbjct: 1123 SDCSQLQYFPEILETMENLRQLHLNGTAIKELPSSIERLNRLQVLNLGRCKNLVTLPESI 1182

Query: 536  CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI 568
            C LR L  L +  C  L   P+ L +++ LKR+
Sbjct: 1183 CNLRFLEDLNVNFCSKLHKLPQNLGRLQSLKRL 1215



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 421  ELNLRCSKVEQPWEGEKACVPSS------IQNFKYLSALSFKGCQSLRSFPSNL-HFVCP 473
            +++  C++ ++  E  K C+         I+       L  + C++L S P+++  F   
Sbjct: 1616 DVDASCAECQRNVEHRKLCLKGQTISLPPIECASEFDTLCLRECKNLESLPTSIWEFKSL 1675

Query: 474  VTINFSYCVNLIEFPQI---SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
             ++  S C  L  FP+I      + +L+L  +AI+E+PSSIE L  L+VL+L  CK L  
Sbjct: 1676 KSLFCSDCSQLQYFPEILENMENLRQLHLNGTAIKELPSSIEHLNRLQVLNLERCKNLVT 1735

Query: 531  ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLK 566
            +  S C LR L  L +  C  L   P+ L +++ LK
Sbjct: 1736 LPESICNLRFLEDLNVNYCSKLHKLPQNLGRLQSLK 1771



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 120/527 (22%), Positives = 199/527 (37%), Gaps = 92/527 (17%)

Query: 559  LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
             ++M  L+ +      I +LP  F            D   L++LP N    + ++  L+ 
Sbjct: 561  FKRMNRLRLLILSHNCIEQLPEDFVFPSDDLTCLGWDGYSLESLPPNFHPNDLVFLGLSN 620

Query: 619  ASAISQLPSSVALSNM--LRSLDSSHCKGLESF---PRTFLLGLSAMGLL-----HISDY 668
            ++       ++ L N+  +   DS     L +F   P    L LS   +L     HI  +
Sbjct: 621  SNIKRLWKGNMCLRNLRYINLNDSQQLIELPNFSNVPNLEELNLSGCIILLKVHTHIRVF 680

Query: 669  AVREI---PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
               ++   P+    +  LE L L     + LP+ I+ +  LR ++L++   L+ LP    
Sbjct: 681  GCSQLTSFPKIKRSIGKLERLSLDNTAIKELPSSIELLEGLRNLYLDNCKNLEGLPNSIC 740

Query: 726  CLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLED---CNMLRS 782
             L++L ++  +    L  LP   E L+   C  + SL  L   L  L+ E     +ML  
Sbjct: 741  NLRFLEVLSLEGCSKLDRLP---EDLERMPCLEVLSLNSLSCQLPSLSEEGGTLSDMLVG 797

Query: 783  LPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC 842
            + +L   L+ L + +C ++  +PE+   L+ LD      +    P +      LKSA   
Sbjct: 798  ISQLSN-LRALDLSHCKKVSQIPELPSSLRLLDMH--SSIGTSLPPMHSLVNCLKSA--- 851

Query: 843  FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGS-E 901
               +  LK    +N   L+DS   I H                      G  IV+PGS  
Sbjct: 852  ---SEDLKYKSSSNVVFLSDSYF-IGH----------------------GICIVVPGSCG 885

Query: 902  IPDWFSNQSSGSSICIQLPPHSSCRN-LIGFAFCAVL----------------------- 937
            IP+W  NQ   + I + LP +    N  +G A C V                        
Sbjct: 886  IPNWIRNQRKENRITMDLPRNCYENNDFLGIAICCVYAPLDECEDIPENDFAHKSENESD 945

Query: 938  DSKKVDSDCFRYFYVSFQFDLEIK----------TLSETKHVDLGYNSRYIEDLIDSDRV 987
            D    + D F     S   +LE +          TL   +H+      +   D   S+++
Sbjct: 946  DEALNEYDDFLEAESSISTELECQLSLHDRYGFSTLC-VQHLSFRTTCKCYHDGGGSEQM 1004

Query: 988  ILGFKPCLNVGFPDGYHHTIATF---KFFAERKFYKIKRCGLCPVYA 1031
             + F P       +  H   + F    F   R  +K+ +CGL P+YA
Sbjct: 1005 WVIFYP--KAAILESCHTNPSIFLGAIFMGCRNHFKVLKCGLEPIYA 1049



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 34/230 (14%)

Query: 390  LDYLPK------KLRYLHWDTYPLRTLPSNFKPKNLVE-LNL-RCSKVEQPWEGEKACVP 441
            L Y P+       LR LH +   ++ LPS+ +  N ++ LNL RC  +          +P
Sbjct: 1686 LQYFPEILENMENLRQLHLNGTAIKELPSSIEHLNRLQVLNLERCKNL--------VTLP 1737

Query: 442  SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT------INFSYCVNLIEFPQISGKVT 495
             SI N ++L  L+   C  L   P NL  +  +       +N   C  L      S K  
Sbjct: 1738 ESICNLRFLEDLNVNYCSKLHKLPQNLGRLQSLKCLRARGLNSRCCQLLSLSGLCSLKEL 1797

Query: 496  RLYLGQSAIEEVPSSIECLTDLEVLDLRGCK-RLKRISTSFCKLRSLVTLILLGCLNLEH 554
             L   +     V S I CL  LEV+DLR C      I T  C+L SL  L L G L    
Sbjct: 1798 DLIYSKLMQGVVLSDICCLYSLEVVDLRVCGIDEGGIPTEICQLSSLQELFLFGNL-FRS 1856

Query: 555  FPEILEKMEHLKRIY----SDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
             P  + ++  L+ +      +   I  LPSS      L VL +  C +L+
Sbjct: 1857 IPAGINQLSRLRLLVLGNCQELRQIPALPSS------LRVLDIHLCKRLE 1900



 Score = 47.8 bits (112), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 10/128 (7%)

Query: 421  ELNLRCSKVEQPWEGEKACVPSS------IQNFKYLSALSFKGCQSLRSFPSNLH-FVCP 473
            +++  C + ++  E  K C+         I++      L  + C++L S P+++  F   
Sbjct: 2514 DVDASCVECQRNVEHRKLCLKGQTINLLPIEHASEFDTLCLRECKNLESLPTSIREFKSL 2573

Query: 474  VTINFSYCVNLIEFPQI---SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
             ++  S C  L  FP+I      +  L+L  +AI+E+PSSIE L  LE+L+L  C+ L  
Sbjct: 2574 KSLFGSDCSQLQYFPEILENMENLRELHLNGTAIKELPSSIEHLNRLELLNLDRCQNLVT 2633

Query: 531  ISTSFCKL 538
            +  S C L
Sbjct: 2634 LPGSTCNL 2641



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 39/73 (53%)

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
            LP+S      L+ LF  DCS+L   P+ + ++E L  +    +AI +LPSS+   N L  
Sbjct: 2563 LPTSIREFKSLKSLFGSDCSQLQYFPEILENMENLRELHLNGTAIKELPSSIEHLNRLEL 2622

Query: 638  LDSSHCKGLESFP 650
            L+   C+ L + P
Sbjct: 2623 LNLDRCQNLVTLP 2635



 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 610  EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA 669
            E+    L     +  LP+S+     L+SL  S C  L+ FP   L  +  +  LH++  A
Sbjct: 2548 EFDTLCLRECKNLESLPTSIREFKSLKSLFGSDCSQLQYFPE-ILENMENLRELHLNGTA 2606

Query: 670  VREIPQEIAYLSSLEILYLS-GNNFESLPA 698
            ++E+P  I +L+ LE+L L    N  +LP 
Sbjct: 2607 IKELPSSIEHLNRLELLNLDRCQNLVTLPG 2636


>gi|358344433|ref|XP_003636294.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355502229|gb|AES83432.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1198

 Score =  342 bits (878), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 274/753 (36%), Positives = 391/753 (51%), Gaps = 92/753 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DSS+ VQI+G+WGMGG GKTTLA A+F + S  +EG CF+ +V   SE  G +     +
Sbjct: 208 IDSSE-VQIIGVWGMGGTGKTTLAAAMFQRVSSHYEGHCFLENVTEQSEKHG-INDTCNK 265

Query: 61  MLSTTLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF-GQGSR 118
           +LS  L E L++     IP   + R++RMK  IVLDDV+    L+ LIG    + G GS 
Sbjct: 266 LLSKLLGEDLDITTLKVIPSMIRRRLKRMKSFIVLDDVHTSELLQNLIGVGHGWLGAGST 325

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           ++VTTRDK VL    G  ++IY V  +  + + + FC  AF      E     S+  + Y
Sbjct: 326 VIVTTRDKHVL--ISGGIEEIYEVKKMNSQNSLQLFCLNAFDTVFPKEGFVELSKRAIDY 383

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
            KG PL L+VLGSSL  K +  W   L  L +I  +EI  I   L+ S+N+L  + K+IF
Sbjct: 384 AKGIPLALKVLGSSLRCKSEIEWNCALSKLEKISNAEIDRI---LRWSYNELDDKEKNIF 440

Query: 239 LDIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQI 294
           LDIACFF+G +++ V  IL+D    +D+ +  L+DK+L+ +   NF+ MHD++QEMGRQI
Sbjct: 441 LDIACFFKGRERNSVTKILNDCGFFADIGISHLLDKALIRVDYKNFIQMHDLIQEMGRQI 500

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VR+ES K PG+RSRL DPKE+  VLK+N+G++ IE IFLD ++   INL+P+AF  M NL
Sbjct: 501 VREESLKNPGQRSRLCDPKEVFDVLKNNRGSEIIEAIFLDATEYTHINLNPKAFEKMVNL 560

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL  F                 +      V LP+GLD LP+ LRY  WD YP ++LP  F
Sbjct: 561 RLLAF----------------RDHKGVKSVSLPHGLDSLPETLRYFLWDGYPWKSLPPTF 604

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             + LVEL+++ S VE+ W G        + +   L  L     +               
Sbjct: 605 CAEMLVELSMQESHVEKLWNG--------VLDMPNLEVLDLGRSR--------------- 641

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVP---SSIECLTDLEVLDLRGCKRLKRI 531
                    LIE P +SG     Y+     E +P   SSI  L  LE L + GC  LK +
Sbjct: 642 --------KLIECPNVSGSPNLKYVTLEDCESMPEVDSSIFLLQKLERLSVLGCTSLKSL 693

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF---ENLPGL 588
           S++ C   +   L  + C NL+        ++ L    ++     ELPSS    +NL  L
Sbjct: 694 SSNTCS-PAFRELNAMFCDNLKDISVTFASVDGLVLFLTEWDG-NELPSSILHKKNLTRL 751

Query: 589 EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
            V  + DC  L +LP+N     +    L +  +    P  + L  +L S         +S
Sbjct: 752 -VFPISDC--LVDLPENFSDEIW----LMSQRSCEHDP-FITLHKVLPS------PAFQS 797

Query: 649 FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
             R   L  S   LL        EIP  I+ LSSL+ L LSG    SLP  I+ + QL+ 
Sbjct: 798 VKR---LIFSHAPLL-------SEIPSNISLLSSLDSLTLSGLIIRSLPETIRYLPQLKR 847

Query: 709 IHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           + + +  MLQS+P L   + +  L +C+ L+ +
Sbjct: 848 LDVLNCKMLQSIPPLSKHVCFFMLWNCESLEKV 880



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 112/484 (23%), Positives = 189/484 (39%), Gaps = 88/484 (18%)

Query: 586  PGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKG 645
            P L+ + +EDC  +  +  +I  L+ L  +        +  SS   S   R L++  C  
Sbjct: 653  PNLKYVTLEDCESMPEVDSSIFLLQKLERLSVLGCTSLKSLSSNTCSPAFRELNAMFCDN 712

Query: 646  LESFPRTFLLGLSAMGL-LHISDYAVREIPQEIAYLSSLEILYLSGNNF-----ESLPAI 699
            L+    TF    S  GL L ++++   E+P  I +  +L  L    ++      E+    
Sbjct: 713  LKDISVTFA---SVDGLVLFLTEWDGNELPSSILHKKNLTRLVFPISDCLVDLPENFSDE 769

Query: 700  IKQMSQLRFIHLEDFNMLQSLPELPL-CLKYLHLIDCKMLQSLPVLPFCLESLDLTGCN- 757
            I  MSQ    H     + + LP      +K L      +L  +P     L SLD    + 
Sbjct: 770  IWLMSQRSCEHDPFITLHKVLPSPAFQSVKRLIFSHAPLLSEIPSNISLLSSLDSLTLSG 829

Query: 758  -MLRSLPE----LPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQ 812
             ++RSLPE    LP  L+ L++ +C ML+S+P L   +    + NC  L+ +  +     
Sbjct: 830  LIIRSLPETIRYLPQ-LKRLDVLNCKMLQSIPPLSKHVCFFMLWNCESLEKVLSL----- 883

Query: 813  ELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAI 872
                                 E  +     F   NC+KL+  +   +L D++ RI  +A 
Sbjct: 884  --------------------SEPAEKPRCGFLLLNCIKLDPHSYQTVLNDAMERIELVA- 922

Query: 873  ASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFA 932
               ++  E A           L  +PG E  +WF   S+  S+ ++LP      NL GFA
Sbjct: 923  ---KVVSENAF--VCDSAWHFLPAMPGME--NWFHYSSTQVSVTLELPS-----NLSGFA 970

Query: 933  FCAVLDSKKV------DSDCF-------RYFYVSF----------QFDLEIKTLSETKHV 969
            +  VL   ++        +CF       + +  SF          +FD  I  +S+  H+
Sbjct: 971  YYLVLSQGRMGYGVDFGCECFLDNNSGEKVYITSFTKTSFIGLLRRFDPLIHMMSD--HL 1028

Query: 970  DLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAERKFYK---IKRCGL 1026
               Y+    + ++++   I       N  +     +   TF+FF     Y    IK CG 
Sbjct: 1029 VFWYDGGSCKQIMEAFEEIKADNDVNNTSY-----NPKLTFRFFIHENIYDEVVIKECGF 1083

Query: 1027 CPVY 1030
              +Y
Sbjct: 1084 HWMY 1087


>gi|225460105|ref|XP_002275120.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
           vinifera]
          Length = 1915

 Score =  342 bits (877), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 253/725 (34%), Positives = 381/725 (52%), Gaps = 67/725 (9%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V +VGI+G+GGIGKTT+A A ++  S  F+GS F+  V    ++ GGL  LQK++   
Sbjct: 207 DDVHMVGIYGIGGIGKTTIAMAFYNDISSRFDGSSFLRGV--GEKSKGGLLELQKKLFKD 264

Query: 65  TL---SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
            L   S   +     I +  K+R+   ++LIVLDDV E+ QL+ L G+   +G  S I++
Sbjct: 265 ILKCESTDFDDTSEGI-NGIKKRLCSKRVLIVLDDVEELEQLENLAGKNGWYGAKSTIII 323

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKEN--HCPEDLNWHSRSVVSYT 179
           TT+D  +L +       +Y V  L  +EA + F  +AFK+N     ED    S  VV Y 
Sbjct: 324 TTKDTSLLSQHG--VNILYEVKELNHKEAIDLFNWWAFKQNIPKPKEDFESLSHCVVGYA 381

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           KG P+ L+VLG  L  K+   W   LH L +I   ++  +   LK+S+ +L    K IFL
Sbjct: 382 KGLPIALKVLGGFLFGKKIDEWKSALHKLEKIPHMKVQSV---LKVSYERLDDTEKEIFL 438

Query: 240 DIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
           DIACFF+G+DKD V+ IL       + +L ++ L++IS N L+MHD+LQ+MG++IVRQE 
Sbjct: 439 DIACFFKGKDKDLVSRILGRYADIGIKVLHERCLITISQNKLDMHDLLQQMGQEIVRQEC 498

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
            KEPGKRSRLWD  ++  +L  N GT+AIEG+F+++     +     +FT M+ LRLF  
Sbjct: 499 LKEPGKRSRLWDSNDVDSMLTRNTGTEAIEGLFVEIPTSNKMQFSTNSFTKMNRLRLFIV 558

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
           Y  +++   K                     ++   +LRYL++    L +LP+NF  +NL
Sbjct: 559 YNKRYWNCFK------------------GDFEFPSSQLRYLNFYGCSLESLPTNFNGRNL 600

Query: 420 VELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
           VEL+L  S +++ W+G++         F  L  ++    + L   P          +N  
Sbjct: 601 VELDLVRSGIKKLWKGDEI--------FNSLKVINLGYSKYLVEIPDFSSVPNLEILNLE 652

Query: 480 YCVNLIEFPQISGKVTRLY---LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFC 536
            C +L  FP+I   +++L    L  +AI EVPSSIE L  LE  +L GC  L  +  S C
Sbjct: 653 GCTSLESFPKIKENMSKLREINLSGTAIIEVPSSIEHLNGLEYFNLSGCFNLVSLPRSIC 712

Query: 537 KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
            L SL TL L  C  L+ FPE+ + M +L+R+    T I EL SS  +L  L+ L +  C
Sbjct: 713 NLSSLQTLYLDSCSKLKGFPEMKDNMGNLERLNLRFTAIEELSSSVGHLKALKHLDLSFC 772

Query: 597 SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
             L NLP++I ++                       + L +L+ S C  ++ FP      
Sbjct: 773 KNLVNLPESIFNI-----------------------SSLETLNGSMCLKIKDFPE-IKNN 808

Query: 657 LSAMGLLHISDYAVREIPQEIAYLSSLEILYLS-GNNFESLPAIIKQMSQLRFIHLEDFN 715
           +  +  L +S  A+ E+P  I YL +L+ L LS  +N  +LP  I  +S L  + + +  
Sbjct: 809 MGNLERLDLSFTAIEELPYSIGYLKALKDLDLSYCHNLVNLPESICNLSSLEKLRVRNCP 868

Query: 716 MLQSL 720
            LQ L
Sbjct: 869 KLQRL 873



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 154/301 (51%), Gaps = 33/301 (10%)

Query: 450  LSALSFKGCQSLRSFPSNL-HFVCPVTINFSYCVNLIEFPQISG---KVTRLYLGQSAIE 505
            L +L  + C++L S PS +       T++ S C  L  FP+I      +  L+L  +AIE
Sbjct: 1339 LGSLCLRECKNLESLPSTICELKSLTTLSCSGCSQLTIFPEIFETLENLRELHLEGTAIE 1398

Query: 506  EVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHL 565
            E+PSSI+ L  L+ L+L  C  L  +  +  +L+SLV L   GC  L+ FPEILE +E+L
Sbjct: 1399 ELPSSIQHLRGLQYLNLAYCNNLVSLPETIYRLKSLVFLSCTGCSQLKSFPEILENIENL 1458

Query: 566  KRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQL 625
            + +    T I ELP+S E L GL+ L + +CS L NLP++I +L +              
Sbjct: 1459 RELSLHGTAIKELPTSIERLGGLQDLHLSNCSNLVNLPESICNLRF-------------- 1504

Query: 626  PSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHI----SDYAVREIPQEIAYLS 681
                     L++L+ + C  LE FP+  L  L  + LL      S+  +  I  +   +S
Sbjct: 1505 ---------LKNLNVNLCSKLEKFPQN-LGSLQRLELLGAAGSDSNRVLGAIQSDDCRMS 1554

Query: 682  SLEILYLSGNNF-ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
            S + L LS N F   +P  I Q+S+LR + L     L  +PELP  L+ L +  C  L++
Sbjct: 1555 SWKALNLSINYFSSIIPISIIQLSKLRVLDLSHCQKLLQIPELPPSLRILDVHACPCLET 1614

Query: 741  L 741
            L
Sbjct: 1615 L 1615



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 157/559 (28%), Positives = 243/559 (43%), Gaps = 101/559 (18%)

Query: 496  RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
            +L L  SAI E+P  IE   +L  L LR CK L+ + ++ C+L+SL TL   GC  L  F
Sbjct: 1319 KLCLKGSAINELPF-IESPFELGSLCLRECKNLESLPSTICELKSLTTLSCSGCSQLTIF 1377

Query: 556  PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
            PEI E +E+L+ ++ + T I ELPSS ++L GL+ L +  C+ L +LP+ I  L+ L + 
Sbjct: 1378 PEIFETLENLRELHLEGTAIEELPSSIQHLRGLQYLNLAYCNNLVSLPETIYRLKSLVF- 1436

Query: 616  LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
                                  L  + C  L+SFP   L  +  +  L +   A++E+P 
Sbjct: 1437 ----------------------LSCTGCSQLKSFPE-ILENIENLRELSLHGTAIKELPT 1473

Query: 676  EIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID 734
             I  L  L+ L+LS  +N  +LP  I  +  L+ +++   + L+  P+    L+ L L+ 
Sbjct: 1474 SIERLGGLQDLHLSNCSNLVNLPESICNLRFLKNLNVNLCSKLEKFPQNLGSLQRLELLG 1533

Query: 735  CKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLT 794
                 S  VL     ++    C M  S   L L + Y +      +  L +    L++L 
Sbjct: 1534 AAGSDSNRVLG----AIQSDDCRM-SSWKALNLSINYFSSIIPISIIQLSK----LRVLD 1584

Query: 795  VRNCNRLQSLPEILLCLQELDASV---LEKLSKHSPDLQWAPESLKSAAICFEFTNCLKL 851
            + +C +L  +PE+   L+ LD      LE LS        +P SL               
Sbjct: 1585 LSHCQKLLQIPELPPSLRILDVHACPCLETLS--------SPSSL--------------- 1621

Query: 852  NGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSNQS 910
                    L  SL R    AI     G   +      E++   IV+PG+  IP+W S + 
Sbjct: 1622 --------LGFSLFRCFKSAIEEFECGSYWS-----KEIQ---IVIPGNNGIPEWISQRK 1665

Query: 911  SGSSICIQLPPHSSCRN-LIGFAFCAVLDSKKVDSD-------CFRYFYV-SFQF--DLE 959
             GS I I+LP      N  +G A  +V     ++S+       C   F+V  F+F  DL 
Sbjct: 1666 KGSEITIELPMDWYHNNDFLGVALYSVYVPLHIESNEDPCSLKCQLNFHVHHFEFLDDLP 1725

Query: 960  IKTLS------ETKHVD-----LGYNSRYIEDLIDSDRVILGFKPCL-NVGFPDGYHHTI 1007
             K  S      E   VD      GY   +  D ++  RV    K  + N  + + + H  
Sbjct: 1726 SKFWSMNGLSYEFWPVDELSFRRGYLCHHNGDELNEVRVAYYPKVAIPNQYWSNKWRHLK 1785

Query: 1008 ATFKFFAERKFYKIKRCGL 1026
            A+F  +   K  K+K CG 
Sbjct: 1786 ASFHGYLGSKQVKVKECGF 1804



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 109/262 (41%), Gaps = 57/262 (21%)

Query: 395  KKLRYLHWDTYPLRTLPSNFKP-KNLVELNLR-CSKVEQPWEGEKACVPSSIQNFKYLSA 452
            + LR LH +   +  LPS+ +  + L  LNL  C+ +          +P +I   K L  
Sbjct: 1385 ENLRELHLEGTAIEELPSSIQHLRGLQYLNLAYCNNL--------VSLPETIYRLKSLVF 1436

Query: 453  LSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIE 512
            LS  GC  L+SFP  L  +           NL E          L L  +AI+E+P+SIE
Sbjct: 1437 LSCTGCSQLKSFPEILENI----------ENLRE----------LSLHGTAIKELPTSIE 1476

Query: 513  CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR 572
             L  L+ L L  C  L  +  S C LR L  L +  C  LE FP+ L  ++ L+ + +  
Sbjct: 1477 RLGGLQDLHLSNCSNLVNLPESICNLRFLKNLNVNLCSKLEKFPQNLGSLQRLELLGAAG 1536

Query: 573  TPITELPSSFENLPGLEVLFVEDCS----KLDNLPDNIGSLEYLYYILAAASAISQLPSS 628
            +    +  + ++         +DC     K  NL  N       Y+      +I QL   
Sbjct: 1537 SDSNRVLGAIQS---------DDCRMSSWKALNLSIN-------YFSSIIPISIIQLSK- 1579

Query: 629  VALSNMLRSLDSSHCKGLESFP 650
                  LR LD SHC+ L   P
Sbjct: 1580 ------LRVLDLSHCQKLLQIP 1595



 Score = 44.3 bits (103), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 35/202 (17%)

Query: 663 LHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLP 721
           L  S Y V EIP + + + +LEIL L G  + ES P I + MS+LR I+L       ++ 
Sbjct: 628 LGYSKYLV-EIP-DFSSVPNLEILNLEGCTSLESFPKIKENMSKLREINLSG----TAII 681

Query: 722 ELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC----LQYLNLEDC 777
           E+P  +++L+                LE  +L+GC  L SLP   +C    LQ L L+ C
Sbjct: 682 EVPSSIEHLN---------------GLEYFNLSGCFNLVSLPR-SICNLSSLQTLYLDSC 725

Query: 778 NMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLK 837
           + L+  PE+          N   L+ L      ++EL +SV    +    DL +    + 
Sbjct: 726 SKLKGFPEMK--------DNMGNLERLNLRFTAIEELSSSVGHLKALKHLDLSFCKNLVN 777

Query: 838 SAAICFEFTNCLKLNGKANNKI 859
                F  ++   LNG    KI
Sbjct: 778 LPESIFNISSLETLNGSMCLKI 799


>gi|358345567|ref|XP_003636848.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355502783|gb|AES83986.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1237

 Score =  342 bits (877), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 274/753 (36%), Positives = 391/753 (51%), Gaps = 92/753 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DSS+ VQI+G+WGMGG GKTTLA A+F + S  +EG CF+ +V   SE  G +     +
Sbjct: 208 IDSSE-VQIIGVWGMGGTGKTTLAAAMFQRVSSHYEGHCFLENVTEQSEKHG-INDTCNK 265

Query: 61  MLSTTLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF-GQGSR 118
           +LS  L E L++     IP   + R++RMK  IVLDDV+    L+ LIG    + G GS 
Sbjct: 266 LLSKLLGEDLDITTLKVIPSMIRRRLKRMKSFIVLDDVHTSELLQNLIGVGHGWLGAGST 325

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           ++VTTRDK VL    G  ++IY V  +  + + + FC  AF      E     S+  + Y
Sbjct: 326 VIVTTRDKHVL--ISGGIEEIYEVKKMNSQNSLQLFCLNAFDTVFPKEGFVELSKRAIDY 383

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
            KG PL L+VLGSSL  K +  W   L  L +I  +EI  I   L+ S+N+L  + K+IF
Sbjct: 384 AKGIPLALKVLGSSLRCKSEIEWNCALSKLEKISNAEIDRI---LRWSYNELDDKEKNIF 440

Query: 239 LDIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQI 294
           LDIACFF+G +++ V  IL+D    +D+ +  L+DK+L+ +   NF+ MHD++QEMGRQI
Sbjct: 441 LDIACFFKGRERNSVTKILNDCGFFADIGISHLLDKALIRVDYKNFIQMHDLIQEMGRQI 500

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VR+ES K PG+RSRL DPKE+  VLK+N+G++ IE IFLD ++   INL+P+AF  M NL
Sbjct: 501 VREESLKNPGQRSRLCDPKEVFDVLKNNRGSEIIEAIFLDATEYTHINLNPKAFEKMVNL 560

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL  F                 +      V LP+GLD LP+ LRY  WD YP ++LP  F
Sbjct: 561 RLLAF----------------RDHKGVKSVSLPHGLDSLPETLRYFLWDGYPWKSLPPTF 604

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             + LVEL+++ S VE+ W G        + +   L  L     +               
Sbjct: 605 CAEMLVELSMQESHVEKLWNG--------VLDMPNLEVLDLGRSR--------------- 641

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVP---SSIECLTDLEVLDLRGCKRLKRI 531
                    LIE P +SG     Y+     E +P   SSI  L  LE L + GC  LK +
Sbjct: 642 --------KLIECPNVSGSPNLKYVTLEDCESMPEVDSSIFLLQKLERLSVLGCTSLKSL 693

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF---ENLPGL 588
           S++ C   +   L  + C NL+        ++ L    ++     ELPSS    +NL  L
Sbjct: 694 SSNTCS-PAFRELNAMFCDNLKDISVTFASVDGLVLFLTEWDG-NELPSSILHKKNLTRL 751

Query: 589 EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
            V  + DC  L +LP+N     +    L +  +    P  + L  +L S         +S
Sbjct: 752 -VFPISDC--LVDLPENFSDEIW----LMSQRSCEHDP-FITLHKVLPS------PAFQS 797

Query: 649 FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
             R   L  S   LL        EIP  I+ LSSL+ L LSG    SLP  I+ + QL+ 
Sbjct: 798 VKR---LIFSHAPLL-------SEIPSNISLLSSLDSLTLSGLIIRSLPETIRYLPQLKR 847

Query: 709 IHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           + + +  MLQS+P L   + +  L +C+ L+ +
Sbjct: 848 LDVLNCKMLQSIPPLSKHVCFFMLWNCESLEKV 880



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 112/484 (23%), Positives = 189/484 (39%), Gaps = 88/484 (18%)

Query: 586  PGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKG 645
            P L+ + +EDC  +  +  +I  L+ L  +        +  SS   S   R L++  C  
Sbjct: 653  PNLKYVTLEDCESMPEVDSSIFLLQKLERLSVLGCTSLKSLSSNTCSPAFRELNAMFCDN 712

Query: 646  LESFPRTFLLGLSAMGL-LHISDYAVREIPQEIAYLSSLEILYLSGNNF-----ESLPAI 699
            L+    TF    S  GL L ++++   E+P  I +  +L  L    ++      E+    
Sbjct: 713  LKDISVTFA---SVDGLVLFLTEWDGNELPSSILHKKNLTRLVFPISDCLVDLPENFSDE 769

Query: 700  IKQMSQLRFIHLEDFNMLQSLPELPL-CLKYLHLIDCKMLQSLPVLPFCLESLDLTGCN- 757
            I  MSQ    H     + + LP      +K L      +L  +P     L SLD    + 
Sbjct: 770  IWLMSQRSCEHDPFITLHKVLPSPAFQSVKRLIFSHAPLLSEIPSNISLLSSLDSLTLSG 829

Query: 758  -MLRSLPE----LPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQ 812
             ++RSLPE    LP  L+ L++ +C ML+S+P L   +    + NC  L+ +  +     
Sbjct: 830  LIIRSLPETIRYLPQ-LKRLDVLNCKMLQSIPPLSKHVCFFMLWNCESLEKVLSL----- 883

Query: 813  ELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAI 872
                                 E  +     F   NC+KL+  +   +L D++ RI  +A 
Sbjct: 884  --------------------SEPAEKPRCGFLLLNCIKLDPHSYQTVLNDAMERIELVA- 922

Query: 873  ASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFA 932
               ++  E A           L  +PG E  +WF   S+  S+ ++LP      NL GFA
Sbjct: 923  ---KVVSENAF--VCDSAWHFLPAMPGME--NWFHYSSTQVSVTLELPS-----NLSGFA 970

Query: 933  FCAVLDSKKV------DSDCF-------RYFYVSF----------QFDLEIKTLSETKHV 969
            +  VL   ++        +CF       + +  SF          +FD  I  +S+  H+
Sbjct: 971  YYLVLSQGRMGYGVDFGCECFLDNNSGEKVYITSFTKTSFIGLLRRFDPLIHMMSD--HL 1028

Query: 970  DLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAERKFYK---IKRCGL 1026
               Y+    + ++++   I       N  +     +   TF+FF     Y    IK CG 
Sbjct: 1029 VFWYDGGSCKQIMEAFEEIKADNDVNNTSY-----NPKLTFRFFIHENIYDEVVIKECGF 1083

Query: 1027 CPVY 1030
              +Y
Sbjct: 1084 HWMY 1087


>gi|451798984|gb|AGF69190.1| TMV resistance protein N-like protein 4 [Vitis labrusca]
          Length = 1049

 Score =  342 bits (876), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 236/636 (37%), Positives = 345/636 (54%), Gaps = 70/636 (11%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           + V+++GI G GG+GKTT+AKAI+++ S +++GS F+ ++R  S+  G +  LQ+++L  
Sbjct: 215 NEVRVIGICGTGGVGKTTIAKAIYNEISCQYDGSSFLRNMRERSK--GDILQLQQELLHG 272

Query: 65  TLSEK---LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
            L  K   +      I    K  +   ++LI+ DDV+E+ QL+ L  E D F   S I++
Sbjct: 273 ILRGKFFKINTVDEGIS-MIKRCLSSNRVLIIFDDVDELKQLEYLAEEKDWFQAKSTIII 331

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           T+RDK VL ++  +    Y V+ L  EEA E F  +AFK+NH  E     S +++ Y  G
Sbjct: 332 TSRDKHVLARYGVDIP--YEVSKLNKEEAIELFSLWAFKQNHPKEVYKNLSYNIIDYANG 389

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L+VLG+SL  K+ S W   +  L  I   EIH++   L+ISF+ L    K IFLD+
Sbjct: 390 LPLALKVLGASLFGKKISEWESAMCKLKIIPHMEIHNV---LRISFDGLDDVDKGIFLDV 446

Query: 242 ACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           ACFF+G+DK FV+ IL       +  L D+ L+++S N L+MHD++Q+MG +I+RQE  K
Sbjct: 447 ACFFKGDDKYFVSRILGPHAKHGITTLADRCLITVSKNRLDMHDLIQQMGWEIIRQECPK 506

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
           +PG+RSRLWD      VL  N GT AIEG+FLD  K     L   +F  M+ LRL K + 
Sbjct: 507 DPGRRSRLWDSNAY-HVLIRNMGTQAIEGLFLDRCKFNPSQLTMESFKEMNKLRLLKIHN 565

Query: 362 PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVE 421
           P+     KL          + +  LP   ++   +LRYLHWD YPL +LP NF  KNLVE
Sbjct: 566 PR----RKL----------FLENHLPRDFEFSAYELRYLHWDGYPLESLPMNFHAKNLVE 611

Query: 422 LNLRCSKVEQPWEGEKAC----------------VP--SSIQNFKYLSALSFKGCQSLRS 463
           L+LR S ++Q W G K                  +P  SS+ N   L  L+ +GC +L  
Sbjct: 612 LSLRDSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDLSSVPN---LEILTLEGCVNLEL 668

Query: 464 FPSNLHFVCPV-TINFSYCVNLIEFPQISGKVTRLY---LGQSAIEEVPSSIECLTDLEV 519
            P  ++ +  + T++ + C  L  FP+I   + +L    L  +AI ++PSSI  L  L+ 
Sbjct: 669 LPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAIMDLPSSITHLNGLQT 728

Query: 520 LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYS-------DR 572
           L L+ C +L +I +  C L SL  L L G     HF  I   +  L R+ +       + 
Sbjct: 729 LLLQECSKLHQIPSHICYLSSLKKLNLEG----GHFSSIPPTINQLSRLKALNLSHCNNL 784

Query: 573 TPITELPSSFENLPGLEVLFVEDCSKLDNL--PDNI 606
             I ELPS   NL       V  C+ L+NL  P N+
Sbjct: 785 EQIPELPSGLINLD------VHHCTSLENLSSPSNL 814



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 175/435 (40%), Gaps = 65/435 (14%)

Query: 649  FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
             PR F      +  LH   Y +  +P    +  +L  L L  +N + +    K   +LR 
Sbjct: 576  LPRDFEFSAYELRYLHWDGYPLESLPMNF-HAKNLVELSLRDSNIKQVWRGNKLHDKLRV 634

Query: 709  IHLEDFNMLQSLPELPLC--LKYLHLIDCKMLQSLPVLPF---CLESLDLTGCNMLRSLP 763
            I L     L  +P+L     L+ L L  C  L+ LP   +    L++L   GC+ L   P
Sbjct: 635  IDLSHSVHLIRIPDLSSVPNLEILTLEGCVNLELLPRGIYKLKHLQTLSCNGCSKLERFP 694

Query: 764  ELPLCLQYLNLEDCNMLRSLPELPLC------LQLLTVRNCNRLQSLPEILLCLQELDAS 817
            E+   ++ L + D +   ++ +LP        LQ L ++ C++L  +P  +  L  L   
Sbjct: 695  EIMANMRKLRVLDLSGT-AIMDLPSSITHLNGLQTLLLQECSKLHQIPSHICYLSSLKKL 753

Query: 818  VLE------------KLSK-------HSPDLQWAPESLKSAAICFEFTNCLKL-NGKANN 857
             LE            +LS+       H  +L+  PE L S  I  +  +C  L N  + +
Sbjct: 754  NLEGGHFSSIPPTINQLSRLKALNLSHCNNLEQIPE-LPSGLINLDVHHCTSLENLSSPS 812

Query: 858  KILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICI 917
             +L  SL +     I +    +   +   ++E  G         IP+W  +Q SG  I +
Sbjct: 813  NLLWSSLFKCFKSKIQAR--DFRRPVRTFIAERNG---------IPEWICHQKSGFKITM 861

Query: 918  QLP-PHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSR 976
            +LP       + +GF  C++    ++++   R F     FD +    S   H       +
Sbjct: 862  KLPWSWYENDDFLGFVLCSLYVPLEIETTPHRDFNCKLNFDDDSAYFSCHSH-------Q 914

Query: 977  YIEDLIDSDRVILG---FKPCLNVGFPDGYHHT-----IATFKFFAERKFYKIKRCGLCP 1028
            + E   D D    G   + P  N+  P+GYH        A+F  +   K  K+ RCG   
Sbjct: 915  FCEFCYDEDASSQGCLIYYPKSNI--PEGYHSNEWRTLNASFNVYFGVKPVKVARCGFHF 972

Query: 1029 VYANPSETKDNTFTI 1043
            +YA+  E   N  TI
Sbjct: 973  LYAHDYE--QNNLTI 985


>gi|359477827|ref|XP_002282884.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1408

 Score =  340 bits (873), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 246/716 (34%), Positives = 361/716 (50%), Gaps = 121/716 (16%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK---LEVAGPN 76
           KTT+AKAI+++ SH+++GS F+ +++  S+  G +  LQ+++L   L  K   +      
Sbjct: 230 KTTIAKAIYNEISHQYDGSSFLINIKERSK--GDILQLQQELLHGILRGKNFKINNVDEG 287

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           I    K  +   ++L++ DDV+E+ QL+ L  E D F   S I++T+RDK VL ++  + 
Sbjct: 288 IS-MIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDWFRAKSTIIITSRDKHVLAQYGADI 346

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
           +  Y V+ L  EEA E F  +AFK+N   E     S +++ Y  G PL L+VLG+SL  K
Sbjct: 347 R--YEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYNIIDYANGLPLALKVLGASLFGK 404

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
           + S+W   L  L  +   EIH++   L+ISF+ L    K IFLD+ACFF+G+D+DFV+ I
Sbjct: 405 KISNWESALCKLKIMPHMEIHNV---LRISFDGLDDIDKGIFLDVACFFKGDDRDFVSRI 461

Query: 257 LDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
           L       +  L D+ L+++S N L+MHD++Q+MG +I+RQE  ++PG+RSRL D     
Sbjct: 462 LGPHAKHAITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQECPEDPGRRSRLCDSNAY- 520

Query: 317 RVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTE 376
            VL  NKGT AIEG+FLD  K     L   +F  M+ LRL K + P+     KL      
Sbjct: 521 HVLTGNKGTRAIEGLFLDRCKFNPSELTTESFKEMNRLRLLKIHNPR----RKL------ 570

Query: 377 EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE 436
               + K  LP   ++   +L YLHWD YPL +LP NF  KNLVEL+LR S ++Q W G 
Sbjct: 571 ----FLKDHLPRDFEFYSYELAYLHWDGYPLESLPMNFHAKNLVELSLRDSNIKQVWRGN 626

Query: 437 KACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR 496
           K                              LH    V I+ S+ V+LI  P  S     
Sbjct: 627 K------------------------------LHDKLRV-IDLSHSVHLIRIPDFSS---- 651

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
                     VP       +LE+L L GC                 T +L  C+NLE  P
Sbjct: 652 ----------VP-------NLEILTLEGC-----------------TTVLKRCVNLELLP 677

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
             + K +HL                       + L    CSKL+  P+  G +  L  + 
Sbjct: 678 RGIYKWKHL-----------------------QTLSCNGCSKLERFPEIKGDMRELRVLD 714

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE--IP 674
            + +AI  LPSS+   N L++L    C  L   P   +  LS++  L +    + E  IP
Sbjct: 715 LSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIP-NHICHLSSLKELDLGHCNIMEGGIP 773

Query: 675 QEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
            +I +LSSL+ L L   +F S+P  I Q+S+L  ++L   N L+ +PELP  L+ L
Sbjct: 774 SDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNLEQIPELPSRLRLL 829



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 101/183 (55%), Gaps = 3/183 (1%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S + EVP  IE   +L+ L LR C+ L  + +S    +SL TL   GC  LE FPEIL+ 
Sbjct: 1104 SDMNEVPI-IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQD 1162

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL-EYLYYILAAAS 620
            ME L+++Y + T I E+PSS + L GL+ L + +C  L NLP++I +L  +   +++   
Sbjct: 1163 MESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCP 1222

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
              ++LP ++     L  L   H   + +F    L GL ++  L +    +RE P EI YL
Sbjct: 1223 NFNKLPDNLGRLQSLEYLFVGHLDSM-NFQLPSLSGLCSLRTLKLQGCNLREFPSEIYYL 1281

Query: 681  SSL 683
            SSL
Sbjct: 1282 SSL 1284



 Score = 73.2 bits (178), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 87/195 (44%), Gaps = 33/195 (16%)

Query: 429  VEQPWEGEKACV---------PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
            +E P E +  C+         PSSI  FK L+ LS  GC  L SFP              
Sbjct: 1112 IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFP-------------- 1157

Query: 480  YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
                  E  Q    + +LYL  +AI+E+PSSI+ L  L+ L LR CK L  +  S C L 
Sbjct: 1158 ------EILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLT 1211

Query: 540  SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPIT--ELPSSFENLPGLEVLFVEDCS 597
            S  TL++  C N    P+ L +++ L+ ++         +LP S   L  L  L ++ C+
Sbjct: 1212 SFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLP-SLSGLCSLRTLKLQGCN 1270

Query: 598  KLDNLPDNIGSLEYL 612
             L   P  I  L  L
Sbjct: 1271 -LREFPSEIYYLSSL 1284



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 92/402 (22%), Positives = 145/402 (36%), Gaps = 104/402 (25%)

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
           F ++P LE+L +E C+                 +L     +  LP  +     L++L  +
Sbjct: 649 FSSVPNLEILTLEGCTT----------------VLKRCVNLELLPRGIYKWKHLQTLSCN 692

Query: 642 HCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN-NFESLPAII 700
            C  LE FP      +  + +L +S  A+ ++P  I +L+ L+ L L        +P  I
Sbjct: 693 GCSKLERFPE-IKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHI 751

Query: 701 KQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLR 760
             +S L+ + L   N+++      +C    HL     LQ L +      S+  T   + R
Sbjct: 752 CHLSSLKELDLGHCNIMEGGIPSDIC----HL---SSLQKLNLEQGHFSSIPTTINQLSR 804

Query: 761 SLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLE 820
                   L+ LNL  CN L  +PELP  L+LL     NR  S    L            
Sbjct: 805 --------LEVLNLSHCNNLEQIPELPSRLRLLDAHGSNRTSSRALFL------------ 844

Query: 821 KLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYE 880
                          L S   CF +   LK          +DS  R              
Sbjct: 845 --------------PLHSLVNCFSWAQGLKRTS------FSDSSYRG------------- 871

Query: 881 MAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLPPHSSCRN-LIGFAFCAVLD 938
                     +G+ IVLP ++ IP+W  +++       +LP +    N  +GFA C V  
Sbjct: 872 ----------KGTCIVLPRTDGIPEWIMDRTKRYFTETELPQNWHQNNEFLGFALCCV-- 919

Query: 939 SKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIED 980
                       YV F ++ E     E+ H     ++   ED
Sbjct: 920 ------------YVPFAYESEDIPEKESAHGSKNESANKSED 949



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 102/237 (43%), Gaps = 34/237 (14%)

Query: 722  ELPLCLKYLHLIDCKMLQSLPVLPF---CLESLDLTGCNMLRSLPELPLCLQYLNLEDCN 778
            E PL L  L L DC+ L SLP   F    L +L  +GC+ L S PE+        L+D  
Sbjct: 1113 ENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEI--------LQDME 1164

Query: 779  MLRSL-------PELPLC------LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKH 825
             LR L        E+P        LQ L +RNC  L +LPE +  L      V+ +    
Sbjct: 1165 SLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSR---- 1220

Query: 826  SPDLQWAPESL-KSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLR-LGYEMAI 883
             P+    P++L +  ++ + F   L         +     LR   +   +LR    E+  
Sbjct: 1221 CPNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLPSLSGLCSLRTLKLQGCNLREFPSEIYY 1280

Query: 884  NEKLS-ELRGSLI--VLPGSEIPDWFSNQSSGSSICIQLP-PHSSCRNLIGFAFCAV 936
               L  E R +LI  +   + IP+W S+Q SG  I ++LP       + +GF  C++
Sbjct: 1281 LSSLGREFRKTLITFIAESNGIPEWISHQKSGFKITMKLPWSWYENDDFLGFVLCSL 1337



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 86/198 (43%), Gaps = 36/198 (18%)

Query: 597  SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
            S ++ +P     LE     L     ++ LPSS+     L +L  S C  LESFP      
Sbjct: 1104 SDMNEVPIIENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFP------ 1157

Query: 657  LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM 716
                           EI Q+   + SL  LYL+G   + +P+ I+++  L+++ L +   
Sbjct: 1158 ---------------EILQD---MESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKN 1199

Query: 717  LQSLPELPLC----LKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRS----LPELP-L 767
            L +LPE  +C     K L +  C     LP     L+SL+      L S    LP L  L
Sbjct: 1200 LVNLPE-SICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLPSLSGL 1258

Query: 768  C-LQYLNLEDCNMLRSLP 784
            C L+ L L+ CN LR  P
Sbjct: 1259 CSLRTLKLQGCN-LREFP 1275


>gi|224120770|ref|XP_002330947.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222873141|gb|EEF10272.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1120

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 304/989 (30%), Positives = 456/989 (46%), Gaps = 188/989 (19%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGP-NIP 78
           KTT+A+ ++D+   +FEGSCF+++VR       G   LQ+Q+LS  L E+  V       
Sbjct: 70  KTTVARVLYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEILMERASVWDSYRGI 129

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+RD  V+     ++ K
Sbjct: 130 EMIKRRLRLKKILLILDDVDDKKQLEFLAEEPGWFGPGSRIIITSRDTNVITG--NDDTK 187

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV+GS L  +  
Sbjct: 188 IYEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFLYGRSI 247

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             W   ++ +N I + +I    D+L+ISF+ L    K IFLDIACF +G  KD +  ILD
Sbjct: 248 PEWRGAINRMNEIPDCKI---IDVLRISFDGLHESDKKIFLDIACFLKGFKKDRIIRILD 304

Query: 259 DSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                      +LI+KSL+S+S + + MH++LQ MG++IVR ES +EPG+RSRLW  +++
Sbjct: 305 SCGFHAHIGTQVLIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDV 364

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
              L  N G + IE IFLD+  IK    +  AF+ MS LRL K                 
Sbjct: 365 CLALMDNTGKEKIEAIFLDMPGIKESQWNIEAFSKMSRLRLLKI---------------- 408

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
                 + VQL  G + L  KL++L W +YP ++LP   +   LVEL++  S +EQ W G
Sbjct: 409 ------NNVQLSEGPEDLSNKLQFLEWHSYPSKSLPVGLQVDQLVELHMANSNLEQLWYG 462

Query: 436 EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT 495
            K+ V     N K                           IN S  + L + P ++G   
Sbjct: 463 CKSAV-----NLK--------------------------IINLSNSLYLTKTPDLTG--- 488

Query: 496 RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
                             + +LE L L GC  L  +  S    + L  + L+ C ++   
Sbjct: 489 ------------------IPNLESLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRIL 530

Query: 556 PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
           P  LE                        +  L+V  ++ CSKL+  PD +G+++ L  +
Sbjct: 531 PNNLE------------------------MGSLKVCILDGCSKLEKFPDIVGNMKCLMVL 566

Query: 616 LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAVREI 673
               + I++L SS+     L  L  + CK LES P +   L  L  + L   S+  ++ I
Sbjct: 567 RLDGTGITKLSSSMHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSE--LKYI 624

Query: 674 PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP-LC-LKYLH 731
           P+++  + SLE   +SG +   LPA I  +  L+ + L+ F  +   P L  LC L+ L 
Sbjct: 625 PEKLGEVESLEEFDVSGTSIRQLPASIFLLKNLKVLSLDGFKRIVMPPSLSGLCSLEVLG 684

Query: 732 LIDCKMLQ-SLPVLPFCLESLDLTGC--NMLRSLPELP---LCLQYLNLEDCNMLRSLPE 785
           L  C + + +LP    CL SL       N   SLP+       L+ L LEDC ML SLP+
Sbjct: 685 LCACNLREGALPEDIGCLSSLRSLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLESLPK 744

Query: 786 LPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC-FE 844
           +P  +Q + +  C  L+++P+                          P +L S+ I  F 
Sbjct: 745 VPSKVQTVCLNGCISLKTIPD--------------------------PINLSSSKISEFV 778

Query: 845 FTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPD 904
             NC +L        +  +LL      +++ R G+ +AI              PG+EIP 
Sbjct: 779 CLNCWELYNHYGQDSMGLTLLERYFQGLSNPRPGFGIAI--------------PGNEIPG 824

Query: 905 WFSNQSSGSSICIQLPPHS----SC---------------------RNLIGFAFCAVLDS 939
           WF++QS GSSI +Q+P  S    +C                      N      C   +S
Sbjct: 825 WFNHQSKGSSISVQVPSWSMGFVACVAFGVNGESPSLFCHFKANGRENYPSSPMCISCNS 884

Query: 940 KKVDSDCFRYFYVSFQFDLEIKTLSETKH 968
            +V SD    FY+SF +   +K L E +H
Sbjct: 885 IQVLSDHIWLFYLSFDY---LKELQEWQH 910


>gi|298204612|emb|CBI23887.3| unnamed protein product [Vitis vinifera]
          Length = 1384

 Score =  340 bits (872), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 260/789 (32%), Positives = 409/789 (51%), Gaps = 71/789 (8%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           M+SSD V+IVGI+G+GG+GKTT+AK I+++ S EFE   F+ ++R  S     L HLQ Q
Sbjct: 211 MESSD-VRIVGIYGVGGMGKTTIAKVIYNELSCEFECMSFLENIREVSNPQV-LYHLQNQ 268

Query: 61  MLSTTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +L   L  +      ++ H     K+ +   K+ +VLDDV++  QL+ L+G  +  G+GS
Sbjct: 269 LLGDILEGEGSQNINSVAHKASMIKDILSSKKVFMVLDDVDDPSQLENLLGHREWLGEGS 328

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           ++++TTRDK VL     E   +Y V GL F+EA E F  +AFK+N    +    S  VV 
Sbjct: 329 KVIITTRDKHVLA--VQEVDVLYEVKGLNFKEAHELFSLYAFKQNLPQSNYRDLSHRVVG 386

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y +G PL L+VLGS L  K    W   L  L++  E +IH++   LK S++ L    K I
Sbjct: 387 YCQGLPLALKVLGSLLFKKTIPQWESELDKLDKEPEMKIHNV---LKRSYDGLDRTEKKI 443

Query: 238 FLDIACFFEGE-DKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
           FLD+ACFF+GE D+DFV+ ILD     +E  + + L D+ L+++  N ++MHD++++ G 
Sbjct: 444 FLDVACFFKGEEDRDFVSRILDGCHFHAERGIRN-LNDRCLITLPYNQIHMHDLIRQTGW 502

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           +IVR++   EP K SRLWD ++I R L+  +G + +E I L+LS  + +  +   F+ M+
Sbjct: 503 EIVREKFPNEPNKWSRLWDTQDIQRALRTYEGIEGVETIDLNLSDFERVCFNSNVFSKMT 562

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NLRL + +   +++      M  EE     + +     D    K+  L   +  L  +P 
Sbjct: 563 NLRLLRVHSDDYFDPYSHDDMEEEEDEEDEEEEEEKEKDLQSLKVIDLS-HSNKLVQMPE 621

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVP-----SSIQNFKYLSALSFKGCQSLRSFPSN 467
                NL EL L            K CV       S+ + K L+ L  +GC  L+  PS+
Sbjct: 622 FSSMPNLEELIL------------KGCVSLINIDPSVGDLKKLTTLDLRGCVKLKGLPSS 669

Query: 468 LHFVCPVT-INFSYCVNLIEFPQISG------KVTRLYLGQSAIEEVPSSIECLTDLEVL 520
           +  +  +  ++ + C +  +F +I G       +T LYL ++AI E+PSSI+ L  +E+L
Sbjct: 670 ISNLEALECLDLTRCSSFDKFAEIQGIQGNMSSLTHLYLRKTAIRELPSSID-LESVEIL 728

Query: 521 DLRGCKR-----------------------LKRISTSFCKLRSLVTLILLGCLNLEHFPE 557
           DL  C +                       +K + T      SL  L L  C   E FPE
Sbjct: 729 DLSDCSKFEKFPENGANMKSLNDLRLENTAIKELPTGIANWESLEILDLSYCSKFEKFPE 788

Query: 558 ILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILA 617
               M+ LK++  + T I +LP S  +L  LE+L +  CSK +  P+  G+++ L  +  
Sbjct: 789 KGGNMKSLKKLRFNGTSIKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLRF 848

Query: 618 AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI 677
             ++I  LP S+     L  LD S+C   E FP      + ++  LH+ + A++++P  I
Sbjct: 849 NGTSIKDLPDSIGDLESLEILDLSYCSKFEKFPEKG-GNMKSLKKLHLKNTAIKDLPDSI 907

Query: 678 AYLSSLEILYLSGN-NFESLP---AIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI 733
             L SLEIL LS    FE  P     +K + +L  I+    ++  S+ +L   L+ LHL 
Sbjct: 908 GDLESLEILDLSKCLKFEKFPEKGGNMKSLKKLSLINTAIKDLPDSVGDLE-SLEILHLS 966

Query: 734 DCKMLQSLP 742
           +C   +  P
Sbjct: 967 ECSKFEKFP 975



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 212/475 (44%), Gaps = 55/475 (11%)

Query: 332  FLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLD 391
            F   ++I+GI  +  + T++   +     +P   ++E +  +   +   + K    NG +
Sbjct: 687  FDKFAEIQGIQGNMSSLTHLYLRKTAIRELPSSIDLESVEILDLSDCSKFEKFP-ENGAN 745

Query: 392  YLPKKLRYLHWDTYPLRTLPS---NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFK 448
               K L  L  +   ++ LP+   N++   +++L+  CSK E+         P    N K
Sbjct: 746  M--KSLNDLRLENTAIKELPTGIANWESLEILDLSY-CSKFEK--------FPEKGGNMK 794

Query: 449  YLSALSFKGCQSLRSFPSNLHFVCPVTI-NFSYCVNLIEFPQISGKVT---RLYLGQSAI 504
             L  L F G  S++  P ++  +  + I + SYC    +FP+  G +    +L    ++I
Sbjct: 795  SLKKLRFNGT-SIKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTSI 853

Query: 505  EEVPSSIECLTDLEVLDLRGCKR-----------------------LKRISTSFCKLRSL 541
            +++P SI  L  LE+LDL  C +                       +K +  S   L SL
Sbjct: 854  KDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLHLKNTAIKDLPDSIGDLESL 913

Query: 542  VTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDN 601
              L L  CL  E FPE    M+ LK++    T I +LP S  +L  LE+L + +CSK + 
Sbjct: 914  EILDLSKCLKFEKFPEKGGNMKSLKKLSLINTAIKDLPDSVGDLESLEILHLSECSKFEK 973

Query: 602  LPDNIGSL----------EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
             P+  G++          E +  +    +AI  LP S+     L SLD S C   E FP 
Sbjct: 974  FPEKGGNMKKISGEGREHEKIKAVSLINTAIKDLPDSIGDLESLESLDLSECSKFEKFPE 1033

Query: 652  TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
                 + ++  L++ + A++++P  I  L SL+IL L     + LP I +     R I  
Sbjct: 1034 KGG-NMKSLKELYLINTAIKDLPDSIGGLESLKILNLKNTAIKDLPNISRLKFLKRLILC 1092

Query: 712  EDFNMLQSLPELPLC-LKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPEL 765
            +  +M + L    LC L+  ++  C+M + +PVLP  LE +D   C     L  L
Sbjct: 1093 DRSDMWEGLISNQLCNLQKPNISQCEMARQIPVLPSSLEEIDAHHCTSKEDLSGL 1147


>gi|359493210|ref|XP_002269168.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 992

 Score =  340 bits (871), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 216/544 (39%), Positives = 312/544 (57%), Gaps = 31/544 (5%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+AKA+++  S++FEG  F+++VR NS+   GL  LQ+Q+L      K +    N+ H
Sbjct: 224 KTTIAKALYNVISYKFEGVSFLANVRENSKDDVGLLRLQQQLLDDIRKRKNQQIS-NV-H 281

Query: 80  FTKERVRRM----KLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGE 135
              + ++++    ++L+VLDDV+   Q++ L+G+ D F +GSRI++TTRD+  L+ + G 
Sbjct: 282 EGMDAIKKVLSLKRVLVVLDDVDNCKQVENLVGKRDCFVRGSRILITTRDRHPLDAY-GA 340

Query: 136 EKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
           +K  + +  L  EEA + F  +AFK N   ED    S  +V Y KG PLVL VLGS LC 
Sbjct: 341 DKPYHEIEELNSEEALQLFSLYAFKPNCHQEDYEDLSNHIVKYAKGLPLVLRVLGSHLCE 400

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           +  + W   LH L R     + DI ++LKIS+N L      IFLDIACFF+G+DKDFV+ 
Sbjct: 401 RTPNQWKSELHKLER---EPVQDIQNVLKISYNGLDRTQGEIFLDIACFFKGQDKDFVSR 457

Query: 256 ILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           ILD  +        +L D+SL++I  N ++MHD++Q+MG  IVR++  KEPGK SRLW+P
Sbjct: 458 ILDGCDLYAESGFSVLCDRSLITILDNKIHMHDLIQQMGWHIVREQYPKEPGKWSRLWEP 517

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYE--IEKL 370
           K++  VL  N GT AIEGIFLD+S  K +    +AF  M  LRL K +    Y+  +  L
Sbjct: 518 KDVFHVLTRNTGTKAIEGIFLDMSTSKQLQFTTKAFKRMKMLRLLKVHRDAKYDSIVNSL 577

Query: 371 PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
             +   + L  S+       ++  ++LRYLHWD YP+ +LPSNF  +NLVELNLRCS ++
Sbjct: 578 TPVEPSKVL-LSQEHFCRDFEFPSQELRYLHWDGYPMESLPSNFYAENLVELNLRCSNIK 636

Query: 431 QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
           Q WE E           + L  +    CQ L   P+         +    C+NL   P+ 
Sbjct: 637 QLWETEL---------LEKLKVIDLSHCQHLNKIPNPSSVPNLEILTLKGCINLETLPEN 687

Query: 491 SGKVT---RLYLGQSAIEEVPSSIECLTDLEVLDLR---GCKRLKRISTSFCKLRSLVTL 544
            G +    +LYL  +AI  +PSSIE L  LE L L     C +L+++      L+ L TL
Sbjct: 688 MGNMENLRQLYLNYTAILNLPSSIEHLKGLEYLSLECFSCCSKLEKLPEDLKSLKRLETL 747

Query: 545 ILLG 548
            L G
Sbjct: 748 SLHG 751



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 115/273 (42%), Gaps = 40/273 (14%)

Query: 486 EFPQISGKVTRLY------------LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
           ++P+  GK +RL+             G  AIE +            LD+   K+L+  + 
Sbjct: 503 QYPKEPGKWSRLWEPKDVFHVLTRNTGTKAIEGI-----------FLDMSTSKQLQFTTK 551

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
           +F +++ L  L +      +     L  +E  K + S           FE  P  E+ ++
Sbjct: 552 AFKRMKMLRLLKVHRDAKYDSIVNSLTPVEPSKVLLSQE----HFCRDFE-FPSQELRYL 606

Query: 594 E-DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
             D   +++LP N  + E L  +    S I QL  +  L   L+ +D SHC+ L   P  
Sbjct: 607 HWDGYPMESLPSNFYA-ENLVELNLRCSNIKQLWETELLEK-LKVIDLSHCQHLNKIPNP 664

Query: 653 F----LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
                L  L+  G +++       +P+ +  + +L  LYL+     +LP+ I+ +  L +
Sbjct: 665 SSVPNLEILTLKGCINL-----ETLPENMGNMENLRQLYLNYTAILNLPSSIEHLKGLEY 719

Query: 709 IHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           + LE F+    L +LP  LK L  ++   L  L
Sbjct: 720 LSLECFSCCSKLEKLPEDLKSLKRLETLSLHGL 752



 Score = 40.4 bits (93), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 114/303 (37%), Gaps = 63/303 (20%)

Query: 647 ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
           E F R F      +  LH   Y +  +P    Y  +L  L L  +N       IKQ+ + 
Sbjct: 590 EHFCRDFEFPSQELRYLHWDGYPMESLPSNF-YAENLVELNLRCSN-------IKQLWE- 640

Query: 707 RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP---VLPFCLESLDLTGCNMLRSLP 763
                          EL   LK + L  C+ L  +P    +P  LE L L GC  L +LP
Sbjct: 641 --------------TELLEKLKVIDLSHCQHLNKIPNPSSVP-NLEILTLKGCINLETLP 685

Query: 764 ELPLCLQ-----YLNLEDCNMLRSLPELPLCLQLLTVRN---CNRLQSLPEILLCLQELD 815
           E    ++     YLN      L S  E    L+ L++     C++L+ LPE L  L+ L+
Sbjct: 686 ENMGNMENLRQLYLNYTAILNLPSSIEHLKGLEYLSLECFSCCSKLEKLPEDLKSLKRLE 745

Query: 816 ASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASL 875
              L  L+   P +      L S+   F+   C    G +    L DS            
Sbjct: 746 TLSLHGLNCQLPSVSGPSSFLPSSFSEFQDLVC----GSSFQLYLDDSYSYFE------- 794

Query: 876 RLGYEMAINEKLSELRGSLIVLPG-SEIPDWFSNQSSGSSICIQLPPH-SSCRNLIGFAF 933
                           G  I  PG S IP+W   ++ G+ + I LP      ++ +GFA 
Sbjct: 795 ---------------EGVSIFFPGISGIPEWIMGENMGNHVTIDLPQDWYEDKDFLGFAL 839

Query: 934 CAV 936
           C+ 
Sbjct: 840 CSA 842


>gi|255573549|ref|XP_002527699.1| ATP binding protein, putative [Ricinus communis]
 gi|223532930|gb|EEF34698.1| ATP binding protein, putative [Ricinus communis]
          Length = 908

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 211/490 (43%), Positives = 283/490 (57%), Gaps = 54/490 (11%)

Query: 8   QIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG--GLEHLQKQML-ST 64
           + VGIWGMGGIGKTT+A+ IF++ S  FE  CF+ ++R   E  G  GL +LQ++ L   
Sbjct: 208 RTVGIWGMGGIGKTTIARVIFNKMSGSFENRCFLGNIR---EKIGKTGLLNLQREFLCEI 264

Query: 65  TLSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
           +  E +     ++   F  +R+R  K+L+VLDDV+ +  L  L G L+ FG GSRI+VT+
Sbjct: 265 SGGENISADTVDVMSSFIIKRLRNKKVLVVLDDVDNLMDLSSLTGGLNLFGPGSRIIVTS 324

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH-SRSVVSYTKGN 182
           RDK+VL+ + G +  IY V GL   E+ + F ++AF E   P +  W+ S  V+ Y KG 
Sbjct: 325 RDKQVLQ-YCGVDS-IYEVKGLNNHESLQLFSHYAF-EQSLPTEAYWNLSNRVLQYAKGL 381

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L++ GS LC +    W  +LH L     SE+ ++   L+IS+  L    K IFLDIA
Sbjct: 382 PLALKICGSHLCTRSIEQWESILHRLESPLNSEVQEV---LQISYYGLDDLDKDIFLDIA 438

Query: 243 CFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
           CFF G+  D V  IL DS   +D+ +  LI KSL+SIS   L MH+++QEMG +IVRQES
Sbjct: 439 CFFRGQGIDHVKEILYDSGFYADIGIARLIGKSLISISDKRLEMHNLVQEMGWEIVRQES 498

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
             EPG RSRLW+ +EI  VL  NKGT A+ GI LDLSKI  + L   +FT M NL+  KF
Sbjct: 499 IYEPGSRSRLWNHEEIYHVLTSNKGTGAVRGINLDLSKIHKLCLSSDSFTRMGNLKFLKF 558

Query: 360 YVP--KFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
           Y P  K++E +             SK+    GL YLP  LR LHWD YPL +LPSNF+P+
Sbjct: 559 YTPFSKYWEDD-------------SKLYALEGLAYLPASLRLLHWDRYPLNSLPSNFEPR 605

Query: 418 NLVELNLRCSKVEQPWEGEK----------------------ACVPSSIQNFKYLSALSF 455
            LVEL L  SK+E  WEG K                      + +P  I+   +L  L  
Sbjct: 606 QLVELILCHSKLELLWEGAKLLESSFSRLSSLEHLDLRGNNFSNIPGDIRQLFHLKLLDI 665

Query: 456 KGCQSLRSFP 465
             C +LRS P
Sbjct: 666 SSCSNLRSLP 675



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 150/383 (39%), Gaps = 106/383 (27%)

Query: 704  SQLRFIHLEDFNMLQSLP---------ELPLCLKYLHLI--DCKMLQSLPVLPFCLESLD 752
            + LR +H + +  L SLP         EL LC   L L+    K+L+S       LE LD
Sbjct: 583  ASLRLLHWDRYP-LNSLPSNFEPRQLVELILCHSKLELLWEGAKLLESSFSRLSSLEHLD 641

Query: 753  LTGCNM------LRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPE 806
            L G N       +R L  L L    L++  C+ LRSLPELP  ++ +   +C  L+S+  
Sbjct: 642  LRGNNFSNIPGDIRQLFHLKL----LDISSCSNLRSLPELPSHIEYVNAHDCTSLESVS- 696

Query: 807  ILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAI---CFEFTNCLKLNGKANNKILADS 863
                                      P S   +      F FTNC KLN  A    L   
Sbjct: 697  -------------------------IPSSFTVSEWNRPMFLFTNCFKLNLSA---FLNSQ 728

Query: 864  LLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHS 923
             + ++   +                 L  + I  PGS+IP+  S+QS+GS + +QLP H 
Sbjct: 729  FIDLQESGL-----------------LPSAGICFPGSKIPEQISHQSAGSLLTVQLPVHW 771

Query: 924  SCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETK----------HVDLGY 973
            S     GFA  AV+  K    DC        +  ++++ +              H   G+
Sbjct: 772  SNSQFRGFALAAVIGFK----DCLDNHGFLVKCTIKLRAMHGDSISLQQEFIIFHGHSGH 827

Query: 974  --NSRYIEDLIDSDRVILGFKPCLNVGFPDGYH------HTIATFKFFAERKFYKIKRCG 1025
              NSR    ++ SD V L +   +N+    G        HT A+F F+A     +   CG
Sbjct: 828  WNNSR----ILGSDHVFLSYNHRVNLMESQGDDWQNKSCHTTASFDFYAVDSMGR-PLCG 882

Query: 1026 LCPVYANPSETKDNTFTINFATE 1048
                    SE ++  F++  A E
Sbjct: 883  --------SEVRECGFSLQLAEE 897



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 43/64 (67%)

Query: 680 LSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ 739
           LSSLE L L GNNF ++P  I+Q+  L+ + +   + L+SLPELP  ++Y++  DC  L+
Sbjct: 634 LSSLEHLDLRGNNFSNIPGDIRQLFHLKLLDISSCSNLRSLPELPSHIEYVNAHDCTSLE 693

Query: 740 SLPV 743
           S+ +
Sbjct: 694 SVSI 697


>gi|227438289|gb|ACP30634.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1251

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 241/680 (35%), Positives = 337/680 (49%), Gaps = 109/680 (16%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V+ +GIWG  GIGKT + + IF + S +++   F+ ++    E  G     Q  M    L
Sbjct: 578  VRGIGIWGTAGIGKTAITEKIFRRISVQYKTCVFLKNLHEQVEEKG-----QVTMREEFL 632

Query: 67   SEKLEVAGPNI------PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            S+ LEV    +        F + ++R  K+L+VLDDVN+   ++  +G+L   G GSRI+
Sbjct: 633  SKILEVEASLLRIFDINKSFLRSKLRCKKVLVVLDDVNDCKDIETFLGDLKYLGGGSRII 692

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            +T+R++RV    + E   IY V  L+   +     +     +    +    S  +V Y  
Sbjct: 693  ITSRNRRVF--VQTEMDHIYEVKPLDISSSLRFLDDGT---SMTSANYRKQSLELVIYAN 747

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNR-ICESEIHDIYDILKISFNKLTPRVKSIFL 239
            GNP VL  +        KS + K    L++ + ++    I  IL+  +  L     +I L
Sbjct: 748  GNPEVLHYM--------KSRFQKEFDQLSQEVLQTSPICIPRILRSCYG-LDENEMNILL 798

Query: 240  DIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
            DIACFF   D+D VA +LD            L DKSL++IS N LNMH  +Q  GR+IVR
Sbjct: 799  DIACFFRKMDRDGVAMLLDGCGFFAHVGFRNLFDKSLLTISHNLLNMHRFIQATGREIVR 858

Query: 297  QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
            QES  EPGKRSRLW+ +EI  V  ++ GT AIEGIFLD+ + K  + +P  F  M NLRL
Sbjct: 859  QESGNEPGKRSRLWNAEEIMDVFLNDTGTSAIEGIFLDIPRRK-FDANPNIFEKMRNLRL 917

Query: 357  FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
             KFY                E ++   V LP+GL+YLP KLR LHW+ YPL +LP +F P
Sbjct: 918  LKFYY--------------SEVINSVGVSLPHGLEYLPGKLRLLHWEYYPLSSLPQSFDP 963

Query: 417  KNLVELNLRCSKVEQPWEGEKA-------------------------------------- 438
            KNL+ELNL  S  ++ W+G+KA                                      
Sbjct: 964  KNLLELNLPNSCAKKLWKGKKASFKITILTIQLNMRNPEMLMMSLLQSLEKLKKMRLSYS 1023

Query: 439  CVPSSIQNFKY---LSALSFKGCQS------------------------LRSFPSNLHFV 471
            C  + I  F     L  L  +GC S                        L S PS +   
Sbjct: 1024 CQLTKIPRFSSAPNLELLDLEGCNSLVSISQSICYLTKLVSLNLKDCSKLESIPSTVVLE 1083

Query: 472  CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
                +N S C  L+ FP+IS  V +LY+G + I+E+P SI+ L  LE+LDL   K L  +
Sbjct: 1084 SLEVLNISGCSKLMNFPEISPNVKQLYMGGTIIQEIPPSIKNLVLLEILDLENSKHLVNL 1143

Query: 532  STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
             TS CKL+ L TL L GC +LE FP +  KM+ LK +   RT I EL SS   L  LE L
Sbjct: 1144 PTSICKLKHLETLNLSGCSSLERFPGLSRKMKCLKSLDLSRTAIKELHSSVSYLTALEEL 1203

Query: 592  FVEDCSKLDNLPDNIGSLEY 611
             + +C  L +LPD++ SL +
Sbjct: 1204 RLTECRNLASLPDDVWSLRF 1223



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 109/236 (46%), Gaps = 40/236 (16%)

Query: 559  LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LA 617
            LEK++ ++  YS    +T++P  F + P LE+L +E C+ L ++  +I  L  L  + L 
Sbjct: 1012 LEKLKKMRLSYS--CQLTKIPR-FSSAPNLELLDLEGCNSLVSISQSICYLTKLVSLNLK 1068

Query: 618  AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI 677
              S +  +PS+V L + L  L+ S C  L +FP                         EI
Sbjct: 1069 DCSKLESIPSTVVLES-LEVLNISGCSKLMNFP-------------------------EI 1102

Query: 678  AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID--- 734
            +   +++ LY+ G   + +P  IK +  L  + LE+   L +LP     LK+L  ++   
Sbjct: 1103 S--PNVKQLYMGGTIIQEIPPSIKNLVLLEILDLENSKHLVNLPTSICKLKHLETLNLSG 1160

Query: 735  CKMLQSLPVLPF---CLESLDL--TGCNMLRSLPELPLCLQYLNLEDCNMLRSLPE 785
            C  L+  P L     CL+SLDL  T    L S       L+ L L +C  L SLP+
Sbjct: 1161 CSSLERFPGLSRKMKCLKSLDLSRTAIKELHSSVSYLTALEELRLTECRNLASLPD 1216



 Score = 43.9 bits (102), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 28/192 (14%)

Query: 632  SNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEI------ 685
            S ++ S+  S   GLE  P         + LLH   Y +  +PQ     + LE+      
Sbjct: 923  SEVINSVGVSLPHGLEYLP-------GKLRLLHWEYYPLSSLPQSFDPKNLLELNLPNSC 975

Query: 686  --LYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPV 743
                  G        I+     +R   +   ++LQSL +L    K + L     L  +P 
Sbjct: 976  AKKLWKGKKASFKITILTIQLNMRNPEMLMMSLLQSLEKL----KKMRLSYSCQLTKIPR 1031

Query: 744  LPFC--LESLDLTGCNMLRSLPELPLC----LQYLNLEDCNMLRSLPELPL--CLQLLTV 795
                  LE LDL GCN L S+ +  +C    L  LNL+DC+ L S+P   +   L++L +
Sbjct: 1032 FSSAPNLELLDLEGCNSLVSISQ-SICYLTKLVSLNLKDCSKLESIPSTVVLESLEVLNI 1090

Query: 796  RNCNRLQSLPEI 807
              C++L + PEI
Sbjct: 1091 SGCSKLMNFPEI 1102


>gi|359493402|ref|XP_002279700.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1186

 Score =  339 bits (870), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 279/860 (32%), Positives = 424/860 (49%), Gaps = 102/860 (11%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            D +DT ++VGI+G GGIGKTT+AK ++++  ++F G+ F+ DVR  +   G    LQ+Q+
Sbjct: 211  DLNDT-RVVGIYGTGGIGKTTIAKIVYNEIQYQFTGASFLQDVR-ETFNKGCQLQLQQQL 268

Query: 62   LSTTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            L  T+    E +  N   +  K+R+   K+LIV+DDV+ + QL+ + G    FG GS I+
Sbjct: 269  LHDTVGNDEEFSNINKGINIIKDRLGSKKVLIVIDDVDRLQQLESVAGSPKWFGPGSTII 328

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            +TTR++ +L ++       ++   L +EEA + F   AFK+N   ED    S  +V Y +
Sbjct: 329  ITTRNQHLLVEYGVTIS--HKATELHYEEALQLFSQHAFKQNVPKEDYVDLSNCMVQYAQ 386

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            G PL L+VLGSSL       W      L +   + + +I D L+ISF+ L P  K +FLD
Sbjct: 387  GLPLALKVLGSSLQGMTIDEWKSASDKLKK---NPMKEINDALRISFDGLDPSQKEVFLD 443

Query: 241  IACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
            IACFF+GE KDFV+ ILD     V   + +L D+ LV+I  N + MHD++QEMG  I+R+
Sbjct: 444  IACFFKGECKDFVSRILDGCNLFVTCNIRVLCDRCLVTILNNVIQMHDLIQEMGWAIIRE 503

Query: 298  ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
            E   +P K SRLWD  +I       +  + ++GI  DLS  K +   P+ F++MSNL   
Sbjct: 504  ECLGDPCKWSRLWDVDDIYDAFSKQERLEELKGI--DLSNSKQLVKMPK-FSSMSNLE-- 558

Query: 358  KFYVPKFYEIEKL-PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
            +  +     + +L PS+   + L+Y  +     L      +++   +   L   P N K 
Sbjct: 559  RLNLEGCISLRELHPSIGDLKSLTYLNLGGCEQLRSFLSSMKFESLEVLYLNCCP-NLKK 617

Query: 417  KNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI 476
               +  N+ C K     +     +PSSI    YL++L                      +
Sbjct: 618  FPEIHGNMECLKELYLNKSGIQALPSSIV---YLASLE--------------------VL 654

Query: 477  NFSYCVNLIEFPQISGKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
            N SYC N  +FP+I G +     LY  +S I+E+PSSI  L  LEVL+L  C   ++   
Sbjct: 655  NLSYCSNFKKFPEIHGNMECLKELYFNRSGIQELPSSIVYLASLEVLNLSDCSNFEKFPE 714

Query: 534  SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
                ++ L  L L  C   E FP+    M HL+ ++   + I ELPSS   L  LE+L +
Sbjct: 715  IHGNMKFLRELYLERCSKFEKFPDTFTYMGHLRGLHLRESGIKELPSSIGYLESLEILDL 774

Query: 594  EDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF 653
              CSK +  P+  G+++ L  +    +AI +LP+S+     L  L    C   E F   F
Sbjct: 775  SCCSKFEKFPEIQGNMKCLLNLFLDETAIKELPNSIGSLTSLEMLSLRECSKFEKFSDVF 834

Query: 654  LLGLSAMGLLH---ISDYAVREIPQEIAYLSSLEILYLS-GNNFESLPAIIKQMSQLRFI 709
                + MG L    +    ++E+P  I YL SLE L L   +NFE  P I   M  L+ +
Sbjct: 835  ----TNMGRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSNFEKFPEIQGNMKCLKML 890

Query: 710  HLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE----- 764
             LED     ++ ELP  +  L                 LE LDL+GC+ L   PE     
Sbjct: 891  CLED----TAIKELPNGIGRLQ---------------ALEILDLSGCSNLERFPEIQKNM 931

Query: 765  ---------------LPLC------LQYLNLEDCNMLRSLPELPLC----LQLLTVRNCN 799
                           LP        L+ L+LE+C  L+SLP   +C    L+ L++  C+
Sbjct: 932  GNLWGLFLDETAIRGLPYSVGHLTRLERLDLENCRNLKSLPN-SICGLKSLKGLSLNGCS 990

Query: 800  RLQSLPEILLCLQELDASVL 819
             L++  EI   +++L+   L
Sbjct: 991  NLEAFLEITEDMEQLEGLFL 1010



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 203/445 (45%), Gaps = 56/445 (12%)

Query: 340  GINLDPRAFTNMSNLRLFKF-YVPKFYEIEKL-PSMSTEEQLSYSKVQLPNGLDYLPKKL 397
            GI   P +   +++L +    Y   F +  ++  +M   ++L +++    +G+  LP  +
Sbjct: 637  GIQALPSSIVYLASLEVLNLSYCSNFKKFPEIHGNMECLKELYFNR----SGIQELPSSI 692

Query: 398  RYLHWDTYPLRTLPSNFKP--------KNLVELNL-RCSKVEQPWEGEKACVPSSIQNFK 448
             YL        +  SNF+         K L EL L RCSK E+         P +     
Sbjct: 693  VYLASLEVLNLSDCSNFEKFPEIHGNMKFLRELYLERCSKFEK--------FPDTFTYMG 744

Query: 449  YLSALSFKGCQSLRSFPSNLHFVCPVTI-NFSYCVNLIEFPQISGKVT---RLYLGQSAI 504
            +L  L  +    ++  PS++ ++  + I + S C    +FP+I G +     L+L ++AI
Sbjct: 745  HLRGLHLRE-SGIKELPSSIGYLESLEILDLSCCSKFEKFPEIQGNMKCLLNLFLDETAI 803

Query: 505  EEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG---------------- 548
            +E+P+SI  LT LE+L LR C + ++ S  F  +  L  L L G                
Sbjct: 804  KELPNSIGSLTSLEMLSLRECSKFEKFSDVFTNMGRLRELCLYGSGIKELPGSIGYLESL 863

Query: 549  -------CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDN 601
                   C N E FPEI   M+ LK +  + T I ELP+    L  LE+L +  CS L+ 
Sbjct: 864  EELNLRYCSNFEKFPEIQGNMKCLKMLCLEDTAIKELPNGIGRLQALEILDLSGCSNLER 923

Query: 602  LPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMG 661
             P+   ++  L+ +    +AI  LP SV     L  LD  +C+ L+S P + + GL ++ 
Sbjct: 924  FPEIQKNMGNLWGLFLDETAIRGLPYSVGHLTRLERLDLENCRNLKSLPNS-ICGLKSLK 982

Query: 662  LLHISDYAVREIPQEIAY-LSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSL 720
             L ++  +  E   EI   +  LE L+L       LP+ I+ +  L+ + L +   L +L
Sbjct: 983  GLSLNGCSNLEAFLEITEDMEQLEGLFLCETGISELPSSIEHLRGLKSLELINCENLVAL 1042

Query: 721  PELP---LCLKYLHLIDCKMLQSLP 742
            P       CL  LH+ +C  L +LP
Sbjct: 1043 PNSIGNLTCLTSLHVRNCPKLHNLP 1067



 Score = 40.4 bits (93), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 19/204 (9%)

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSGNNF 693
           L+ +D S+ K L   P+     +S +  L++    ++RE+   I  L SL  L L G   
Sbjct: 534 LKGIDLSNSKQLVKMPK--FSSMSNLERLNLEGCISLRELHPSIGDLKSLTYLNLGG--C 589

Query: 694 ESLPAIIKQMS--QLRFIHLEDFNMLQSLPELP---LCLKYLHLIDCKMLQSLP---VLP 745
           E L + +  M    L  ++L     L+  PE+     CLK L+L +   +Q+LP   V  
Sbjct: 590 EQLRSFLSSMKFESLEVLYLNCCPNLKKFPEIHGNMECLKELYL-NKSGIQALPSSIVYL 648

Query: 746 FCLESLDLTGCNMLRSLPELP---LCLQ--YLNLEDCNMLRSLPELPLCLQLLTVRNCNR 800
             LE L+L+ C+  +  PE+     CL+  Y N      L S       L++L + +C+ 
Sbjct: 649 ASLEVLNLSYCSNFKKFPEIHGNMECLKELYFNRSGIQELPSSIVYLASLEVLNLSDCSN 708

Query: 801 LQSLPEILLCLQELDASVLEKLSK 824
            +  PEI   ++ L    LE+ SK
Sbjct: 709 FEKFPEIHGNMKFLRELYLERCSK 732


>gi|297741883|emb|CBI33318.3| unnamed protein product [Vitis vinifera]
          Length = 1333

 Score =  339 bits (869), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 220/607 (36%), Positives = 338/607 (55%), Gaps = 43/607 (7%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKL-EVAGPNIP 78
           KTT+AKAI+++ SH+++GS F+ +++  S+  G +  LQ+++L   L  K  ++   N  
Sbjct: 66  KTTIAKAIYNEISHQYDGSSFLINIKERSK--GDILQLQQELLHGILRGKFFKINNVNEG 123

Query: 79  HFTKER-VRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
           +   +R +R  ++L++ DDV+E+ QL+ L  E D F   S I++T+RDK VL ++  +  
Sbjct: 124 NSMIKRCLRSNRVLVIFDDVDELKQLEYLAEEKDWFHAKSTIIITSRDKHVLAQYGVDIP 183

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
             Y V+ L  EEA E F  +AFK+N   E     S +++ Y  G PL L+VLG+SL  K+
Sbjct: 184 --YEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYNIIDYADGLPLALKVLGASLFGKK 241

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
            S+W   L  L  I   EIH++   L+ISF+ L    K IFLDIACFF+G+D+DFV+ IL
Sbjct: 242 ISNWESALCKLKIIPHMEIHNV---LRISFDGLDDIEKGIFLDIACFFKGDDRDFVSRIL 298

Query: 258 DDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISR 317
                  +  L D+ L+++S N L+MHD++Q+MG +I+RQE  ++PG+RSRLWD    + 
Sbjct: 299 GPHAEHAITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQECPEDPGRRSRLWDSNA-ND 357

Query: 318 VLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEE 377
           VL  NKGT AIEG+FLD  K   + +   +F  M+ LRL   + P+            E+
Sbjct: 358 VLIRNKGTRAIEGLFLDRCKFNPLQITTESFKEMNRLRLLNIHNPR------------ED 405

Query: 378 QLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK 437
           QL + K  LP   ++   +L YLHWD YPL +LP NF  KNLV+L LR S ++Q W G K
Sbjct: 406 QL-FLKDHLPRDFEFSSYELTYLHWDGYPLESLPMNFHAKNLVQLVLRGSNIKQVWRGNK 464

Query: 438 ACVPSSIQNFKY---------------LSALSFKGCQSLRSFPSNLHFVCPVTI-NFSYC 481
                 + +  Y               L  L   GC +L   P N++ +  + I + + C
Sbjct: 465 LHDKLRVIDLSYSFHLIGIPDFSSVPNLEILILIGCVNLELLPRNIYKLKHLQILSCNGC 524

Query: 482 VNLIEFPQISGKVTRLY---LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
             L  FP+I G + +L    L  +AI ++PSSI  L  L+ L L+ C +L +I    C L
Sbjct: 525 SKLERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHKIPIHICHL 584

Query: 539 RSLVTLILLGCLNLE-HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS 597
            SL  L L  C  +E   P  +  +  L+++  +R   + +P++   L  LEVL +  C+
Sbjct: 585 SSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCN 644

Query: 598 KLDNLPD 604
            L+ + +
Sbjct: 645 NLEQITE 651



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 3/183 (1%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S + EVP  I    +L+ L LR CK L  + +S    +SL TL   GC  LE  PEIL+ 
Sbjct: 933  SDMNEVPI-IGNPLELDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQD 991

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL-YYILAAAS 620
            ME L+++    T I E+PSS + L GL+ L + +C  L NLP++I +L  L + I+ +  
Sbjct: 992  MESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCP 1051

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
            +  +LP ++     L  L       + +F    L GL ++  L +    +REIP EI YL
Sbjct: 1052 SFKKLPDNLGRLQSLLHLSVGPLDSM-NFQLPSLSGLCSLRQLELQACNIREIPSEICYL 1110

Query: 681  SSL 683
            SSL
Sbjct: 1111 SSL 1113



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 145/331 (43%), Gaps = 57/331 (17%)

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWEGE---KACVPSSIQNFKY-LSALSFKGCQSL 461
           PL+    +FK  N     LR   +  P E +   K  +P   +   Y L+ L + G   L
Sbjct: 380 PLQITTESFKEMN----RLRLLNIHNPREDQLFLKDHLPRDFEFSSYELTYLHWDG-YPL 434

Query: 462 RSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLD 521
            S P N H                     +  + +L L  S I++V    +    L V+D
Sbjct: 435 ESLPMNFH---------------------AKNLVQLVLRGSNIKQVWRGNKLHDKLRVID 473

Query: 522 LRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
           L     L  I   F  + +L  LIL+GC+NLE  P  + K++HL                
Sbjct: 474 LSYSFHLIGI-PDFSSVPNLEILILIGCVNLELLPRNIYKLKHL---------------- 516

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
                  ++L    CSKL+  P+  G++  L  +  + +AI  LPSS+   N L++L   
Sbjct: 517 -------QILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQ 569

Query: 642 HCKGLESFPRTFLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAI 699
            C  L   P   +  LS++ +L +    + E  IP +I +LSSL+ L L   +F S+P  
Sbjct: 570 ECSKLHKIP-IHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTT 628

Query: 700 IKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
           I Q+S L  ++L   N L+ + ELP CL+ L
Sbjct: 629 INQLSSLEVLNLSHCNNLEQITELPSCLRLL 659



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 160/384 (41%), Gaps = 70/384 (18%)

Query: 577 ELPSSFENLPGLEVLFVE-DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
            LP  FE     E+ ++  D   L++LP N  + + L  ++   S I Q+     L + L
Sbjct: 412 HLPRDFE-FSSYELTYLHWDGYPLESLPMNFHA-KNLVQLVLRGSNIKQVWRGNKLHDKL 469

Query: 636 RSLD---SSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-N 691
           R +D   S H  G+  F     L +    L+ I    +  +P+ I  L  L+IL  +G +
Sbjct: 470 RVIDLSYSFHLIGIPDFSSVPNLEI----LILIGCVNLELLPRNIYKLKHLQILSCNGCS 525

Query: 692 NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH------LIDCKMLQSLPVLP 745
             E  P I   M +LR + L       ++ +LP  + +L+      L +C  L  +P+  
Sbjct: 526 KLERFPEIKGNMRKLRVLDLSG----TAIMDLPSSITHLNGLQTLLLQECSKLHKIPI-H 580

Query: 746 FC----LESLDLTGCNMLRSLPELPLC----LQYLNLEDCNMLRSLPELP---LCLQLLT 794
            C    LE LDL  CN++       +C    LQ LNLE      S+P        L++L 
Sbjct: 581 ICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLER-GHFSSIPTTINQLSSLEVLN 639

Query: 795 VRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGK 854
           + +CN L+ + E+  CL+ LDA    + S  +P L      L S   CF +    K    
Sbjct: 640 LSHCNNLEQITELPSCLRLLDAHGSNRTSSRAPFL-----PLHSLVNCFRWAQDWK---- 690

Query: 855 ANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGS 913
                                      +  +     +G+ IVLPGS+ IP+W  N+    
Sbjct: 691 -------------------------HTSFRDSSYHGKGTCIVLPGSDGIPEWILNRGDNF 725

Query: 914 SICIQLPPHSSCRN-LIGFAFCAV 936
           S  I+LP +    N  +GFA C V
Sbjct: 726 SSVIELPQNWHQNNEFLGFAICCV 749



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 92/204 (45%), Gaps = 29/204 (14%)

Query: 440  VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
            +PSSI  FK L+ LS  GC  L S P                    E  Q    + +L L
Sbjct: 961  LPSSIFGFKSLATLSCSGCSQLESIP--------------------EILQDMESLRKLSL 1000

Query: 500  GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
              +AI+E+PSSI+ L  L+ L L  CK L  +  S C L SL  LI+  C + +  P+ L
Sbjct: 1001 SGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNL 1060

Query: 560  EKMEHLKRIYSDRTPITELPSSFENLPG---LEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
             +++ L  ++    P+  +     +L G   L  L ++ C+ +  +P  I  L  L  I 
Sbjct: 1061 GRLQSL--LHLSVGPLDSMNFQLPSLSGLCSLRQLELQACN-IREIPSEICYLSSLMPIT 1117

Query: 617  AAASAI---SQLPSSVALSNMLRS 637
                 I   +Q+ S +  SN+L S
Sbjct: 1118 VHPWKIYPVNQIYSGLLYSNVLNS 1141



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 9/174 (5%)

Query: 597  SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
            S ++ +P     LE     L     ++ LPSS+     L +L  S C  LES P   L  
Sbjct: 933  SDMNEVPIIGNPLELDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPE-ILQD 991

Query: 657  LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFN 715
            + ++  L +S  A++EIP  I  L  L+ L LS   N  +LP  I  ++ L+F+ +E   
Sbjct: 992  MESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCP 1051

Query: 716  MLQSLPE-LPLCLKYLHL----IDCKMLQSLPVLPFC-LESLDLTGCNMLRSLP 763
              + LP+ L      LHL    +D    Q   +   C L  L+L  CN +R +P
Sbjct: 1052 SFKKLPDNLGRLQSLLHLSVGPLDSMNFQLPSLSGLCSLRQLELQACN-IREIP 1104



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 173/422 (40%), Gaps = 54/422 (12%)

Query: 635  LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE-IPQEIAYLSSLEILYLSGNNF 693
            L SL    CK L S P + + G  ++  L  S  +  E IP+ +  + SL  L LSG   
Sbjct: 947  LDSLCLRDCKNLTSLPSS-IFGFKSLATLSCSGCSQLESIPEILQDMESLRKLSLSGTAI 1005

Query: 694  ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC----LKYLHLIDCKMLQSLPVLPFCLE 749
            + +P+ I+++  L+++ L +   L +LPE  +C    LK+L +  C   + LP       
Sbjct: 1006 KEIPSSIQRLRGLQYLLLSNCKNLVNLPE-SICNLTSLKFLIVESCPSFKKLP------- 1057

Query: 750  SLDLTGCNMLRSLPELPLC-LQYLNLEDCNMLRSLPELP-LC-LQLLTVRNCNRLQSLPE 806
                     L+SL  L +  L  +N +       LP L  LC L+ L ++ CN ++ +P 
Sbjct: 1058 ----DNLGRLQSLLHLSVGPLDSMNFQ-------LPSLSGLCSLRQLELQACN-IREIPS 1105

Query: 807  ILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKI---LADS 863
             +  L     S L  ++ H     W    +        ++N L    +    I   L+ S
Sbjct: 1106 EICYL-----SSLMPITVHP----WKIYPVNQIYSGLLYSNVLNSKFRYGFHISFNLSFS 1156

Query: 864  LLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLP-PH 922
            + +I+ +     R  +  ++    +E  G         IP+W S+Q SG  I ++LP   
Sbjct: 1157 IDKIQRVIFVQGR-EFRRSVRTFFAESNG---------IPEWISHQKSGFKITMKLPWSW 1206

Query: 923  SSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFD-LEIKTLSETKHVDLGYNSRYIEDL 981
                + +GF  C++    ++++   R F     F       L +   ++      Y ED 
Sbjct: 1207 YENDDFLGFVLCSLYVPLEIETKTHRIFSCILNFGDDSDSFLFDDLRLEQICECCYYEDA 1266

Query: 982  IDSDRVILGFKPCLNVGFPDGYHHTI-ATFKFFAERKFYKIKRCGLCPVYANPSETKDNT 1040
             +   ++   K  +   F      T+ A+F  +   K  K  RCG   +YA+  E  + T
Sbjct: 1267 SNQGLLVYYSKSDIPEKFHSNEWRTLNASFNVYFGIKPVKAARCGFHFLYAHDYEQNNLT 1326

Query: 1041 FT 1042
              
Sbjct: 1327 MV 1328


>gi|47681363|gb|AAT37497.1| N-like protein [Nicotiana tabacum]
          Length = 941

 Score =  338 bits (868), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 270/787 (34%), Positives = 389/787 (49%), Gaps = 104/787 (13%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQF------SHEFEGSCFVSDVRGNSETAGGLEHLQ 58
           + V+IVGIWGMGG+GKTT+A+A+FD        S++F+G+CF+ D++ N     G+  LQ
Sbjct: 207 NDVRIVGIWGMGGVGKTTIARAMFDTLLGRRDSSYQFDGACFLKDIKENKR---GMHSLQ 263

Query: 59  KQMLSTTLSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQ-LKRLIGELDQFGQG 116
             +L   L E       +   H    R+R  K+LIVLDD+++    L+ L G+LD FG G
Sbjct: 264 NTLLFELLRENANYNNEDDGKHQMASRLRSKKVLIVLDDIDDKDHYLEYLAGDLDWFGNG 323

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI+VTTRDK ++    G+   IY V  L   EA + F   AFK+    E     S  VV
Sbjct: 324 SRIIVTTRDKHLI----GKNDIIYEVTALPDHEAIQLFYQHAFKKEVPDECFKELSLEVV 379

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           ++ KG PL L+V GSSL  +  + W   +  +     S+I    + LKIS++ L    + 
Sbjct: 380 NHAKGLPLALKVWGSSLHKRDITVWKSAIEQMKINPNSKI---VEKLKISYDGLESMQQE 436

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGR 292
           +FLDIACFF G  KD++  +L          LD+LI+KSLV IS  N + MHD++Q+MG+
Sbjct: 437 MFLDIACFFRGRQKDYIMQVLKSCHFGAEYGLDVLIEKSLVFISEYNQVEMHDLIQDMGK 496

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
            IV    +K+PG+RSRLW  +++  V+ +N GT ++E I++      G+     A  NM 
Sbjct: 497 YIV--NFKKDPGERSRLWLAEDVEEVMNNNAGTMSVEVIWVHYDF--GLYFSNDAMKNMK 552

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            LR+      K Y    L S S +             ++YLP  LR+   D YP  +LPS
Sbjct: 553 RLRILHI---KGY----LSSTSHD-----------GSIEYLPSNLRWFVLDDYPWESLPS 594

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
            F  K LV L L  S +   W  E   +PS       L  +     + LR  P       
Sbjct: 595 TFDLKMLVHLELSRSSLHYLWT-ETKHLPS-------LRRIDLSSSRRLRRTPDFTGMPN 646

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
              +N  YC NL                    EEV  S+ C + L  L+L  CK LKR  
Sbjct: 647 LEYLNMLYCRNL--------------------EEVHHSLRCCSKLIRLNLNNCKSLKRFP 686

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE--------- 583
                + SL  L L  C +LE FPEI  +M+   +I+   + I ELPSS           
Sbjct: 687 C--VNVESLEYLSLEYCSSLEKFPEIHGRMKPEIQIHMQGSGIRELPSSITQYQTHITKL 744

Query: 584 NLPGLEVLF----------------VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPS 627
           +L G+E L                 V  C KL++LP+ +G LE L  + A+ + IS+ PS
Sbjct: 745 DLRGMEKLVALPSSICRLKSLVSLSVSGCFKLESLPEEVGDLENLEELDASCTLISRPPS 804

Query: 628 SVALSNMLRSLDSSHCKGLESFPRTFLL-GLSAMGLLHISDYAVRE--IPQEIAYLSSLE 684
           S+   + L+  D    K    F    ++ G  ++  L + +  + +  +P+++  LSSL+
Sbjct: 805 SIIRLSKLKIFDFGSSKDRVHFELPPVVEGFRSLETLSLRNCNLIDGGLPEDMGSLSSLK 864

Query: 685 ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP--LCLKYLHLIDCKMLQSLP 742
            LYLSGNNFE LP  I Q+  LR + L +   L  LPE    L L+YL L  C  L+ + 
Sbjct: 865 KLYLSGNNFEHLPRSIAQLGALRILELRNCKRLTQLPEFTGMLNLEYLDLEGCSYLEEVH 924

Query: 743 VLPFCLE 749
             P  L+
Sbjct: 925 HFPGVLQ 931


>gi|297741885|emb|CBI33320.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  338 bits (868), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 221/596 (37%), Positives = 330/596 (55%), Gaps = 34/596 (5%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK---LEVAGPN 76
           KTT+AKAI+++ S +++G  F+ ++R  S+  G +  LQ+++L   L  K   +      
Sbjct: 21  KTTIAKAIYNETSDQYDGRSFLRNIRERSK--GDILQLQQELLHGILRGKNFKINNVDEG 78

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           I    K  +   ++L++ DDV+E+ QL+ L  E D F   S I++TTRDK VL ++  + 
Sbjct: 79  IS-MIKRCLTSNRVLVIFDDVDELKQLEYLAEEKDWFHAKSTIIITTRDKHVLAQYGADI 137

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
              Y V+ L  EEA E F  +AFK+N   E     S +++ Y  G PL L+V+G+SL  K
Sbjct: 138 P--YEVSKLNKEEATELFSLWAFKQNRPQEVYKNLSYNIIDYANGLPLALKVIGASLFGK 195

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
           + SHW   L  L  I   EIH++   L+ISF+ L    K +FLD+ACFF+G+DKDFV+ I
Sbjct: 196 KISHWESALCKLKIIPHKEIHNV---LRISFDGLDDIDKGMFLDVACFFKGDDKDFVSRI 252

Query: 257 LDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
           L      V+  L D+ L++IS N L+MHD++Q MG +++RQE  ++PG+RSRLWD     
Sbjct: 253 LGPHAEHVITTLADRCLITISKNMLDMHDLIQLMGWEVIRQECPEDPGRRSRLWDSNAY- 311

Query: 317 RVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTE 376
            VL  N GT AIEG+FLD  K     L  ++F  M+ LRL K + P+     KL      
Sbjct: 312 HVLIGNTGTRAIEGLFLDRCKFNLSQLTTKSFKEMNRLRLLKIHNPR----RKL------ 361

Query: 377 EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE 436
               + +  LP   ++   +L YLHWD YPL +LP NF  KNLVEL LR S ++Q W G 
Sbjct: 362 ----FLEDHLPRDFEFSSYELTYLHWDRYPLESLPLNFHAKNLVELLLRNSNIKQLWRGN 417

Query: 437 KACVPSSIQNFKY---LSALSFKGCQSLRSFPSNLH-FVCPVTINFSYCVNLIEFPQISG 492
           K  +     NF     L  L+ +GC +L   P  ++ +    T++ + C  L  FP+I G
Sbjct: 418 KVLLLLFSYNFSSVPNLEILTLEGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKG 477

Query: 493 KVTRLY---LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
            +  L    L  +AI ++PSSI  L  L+ L L+ C +L +I    C L SL  L L  C
Sbjct: 478 NMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHC 537

Query: 550 LNLE-HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
             +E   P  +  +  L+++  +R   + +P++   L  LEVL +  CS L+ +P+
Sbjct: 538 NIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIPE 593



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 122/257 (47%), Gaps = 37/257 (14%)

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC--KRLKR--------ISTSF 535
           +F   S ++T L+  +  +E +P +      +E+L LR    K+L R         S +F
Sbjct: 370 DFEFSSYELTYLHWDRYPLESLPLNFHAKNLVELL-LRNSNIKQLWRGNKVLLLLFSYNF 428

Query: 536 CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
             + +L  L L GC+NLE  P  + K +HL                       + L    
Sbjct: 429 SSVPNLEILTLEGCVNLERLPRGIYKWKHL-----------------------QTLSCNG 465

Query: 596 CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
           CSKL+  P+  G++  L  +  + +AI  LPSS+   N L++L    C  L   P   + 
Sbjct: 466 CSKLERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIP-IHIC 524

Query: 656 GLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLED 713
            LS++ +L +    + E  IP +I +LSSL+ L L   +F S+P  I Q+S+L  ++L  
Sbjct: 525 HLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSH 584

Query: 714 FNMLQSLPELPLCLKYL 730
            + L+ +PELP  L+ L
Sbjct: 585 CSNLEQIPELPSRLRLL 601



 Score = 46.6 bits (109), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 118/295 (40%), Gaps = 79/295 (26%)

Query: 557 EILEKMEHLKRIYSDRTPITELPS-SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
           E+L +  ++K+++     +  L S +F ++P LE+L +E C  L+ LP  I   ++L   
Sbjct: 402 ELLLRNSNIKQLWRGNKVLLLLFSYNFSSVPNLEILTLEGCVNLERLPRGIYKWKHL--- 458

Query: 616 LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
                               ++L  + C  LE FP                     EI  
Sbjct: 459 --------------------QTLSCNGCSKLERFP---------------------EIK- 476

Query: 676 EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
               +  L +L LSG     LP+ I  ++ L+ + L++   L  +P + +C    HL   
Sbjct: 477 --GNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIP-IHIC----HLSS- 528

Query: 736 KMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC----LQYLNLEDCNMLRSLPELPLCLQ 791
                       LE LDL  CN++       +C    LQ LNLE  +   S+P     L 
Sbjct: 529 ------------LEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGH-FSSIPTTINQLS 575

Query: 792 LLTVRN---CNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICF 843
            L V N   C+ L+ +PE+   L+ LDA    + S  +P L      L S   CF
Sbjct: 576 RLEVLNLSHCSNLEQIPELPSRLRLLDAHGSNRTSSRAPFL-----PLHSLVNCF 625


>gi|359493404|ref|XP_003634588.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1102

 Score =  338 bits (868), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 257/726 (35%), Positives = 378/726 (52%), Gaps = 72/726 (9%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
           KTT+AK ++++  ++F G+ F+ DVR  +   G    LQ+Q+L   +    + +  N   
Sbjct: 227 KTTIAKIVYNEIQYQFTGASFLQDVR-ETFNKGCQLQLQQQLLHDIVGNDEKFSNINKGI 285

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
           +  K+R+   K+LIV+DDV+ + QL+ + G    FG GS I++TTRD+ +L ++      
Sbjct: 286 NIIKDRLGSKKVLIVIDDVDRLQQLESVAGSPKWFGPGSTIIITTRDQHLLVEYGVTIS- 344

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            ++   L +EEA + F   AFK+N   ED    S  +V Y +G PL L+VLGSSL     
Sbjct: 345 -HKATELHYEEALQLFSQHAFKQNVPKEDYVDLSNCMVQYAQGLPLALKVLGSSLQGMTI 403

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             W K   D ++  ++ + +I D+L+ISF+ L P  K +FLDIACFF+GE KDFV+ ILD
Sbjct: 404 DEW-KSASDKSK--KNPMKEINDVLRISFDGLDPSQKEVFLDIACFFKGECKDFVSRILD 460

Query: 259 DSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                 +  + +L D+ LV+I  N + MHD++QEMG  IVR+E   +P K SRLWD  +I
Sbjct: 461 GCNLFATCNIRVLRDRCLVTILDNVIQMHDLIQEMGWAIVREECPGDPCKWSRLWDVDDI 520

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
                  +    I+ I LDLS+ + I  + + F  M  LRL K Y     + + LP    
Sbjct: 521 YDAFSKQEEMQNIQTISLDLSRSREIQFNTKVFPKMKKLRLLKIYC---NDHDGLPR--- 574

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
           EE     KV LP   ++ P  LRYLHW    L +LP NF  K+L+E+NL+ S ++Q W+G
Sbjct: 575 EEY----KVLLPKDFEF-PHDLRYLHWQRCTLTSLPWNFYGKHLLEINLKSSNIKQLWKG 629

Query: 436 EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT 495
            K          K L  +     + L   P            FS   NL           
Sbjct: 630 NK--------RLKELKGIDLSNSKQLVKMPK-----------FSSMPNL----------E 660

Query: 496 RLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
           RL L G + + E+ SSI  LT L+ L+L  C+ LK +  S C L+SL  L L GC NLE 
Sbjct: 661 RLNLEGCTRLRELHSSIGHLTRLDPLNLENCRNLKSLPNSICGLKSLEGLSLNGCSNLEA 720

Query: 555 FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
           F EI E ME L+R++   T I+ELPSS E++ GL+ L + +C  L  LP++IG+L  L  
Sbjct: 721 FSEITEDMEQLERLFLRETGISELPSSIEHMRGLKSLELINCENLVALPNSIGNLTCL-- 778

Query: 615 ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP 674
               +  +   P    L + LRSL               +L L    L+        EIP
Sbjct: 779 ---TSLHVRNCPKLHNLPDNLRSLQCC----------LTMLDLGGCNLME------EEIP 819

Query: 675 QEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID 734
            ++  LSSLE L +S N+   +PA I Q+ +L  + +    ML+ + ELP  L ++    
Sbjct: 820 NDLWCLSSLEFLNVSENHMRCIPAGITQLCKLGTLLMNHCPMLEVIGELPSSLGWIEAHG 879

Query: 735 CKMLQS 740
           C  L++
Sbjct: 880 CPSLET 885



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 222/554 (40%), Gaps = 98/554 (17%)

Query: 550  LNLEHFPEILEKMEHLKRIY---SDRTPITE----LPSSFENLPGLEVLFVEDCSKLDNL 602
             N + FP++  K   L +IY    D  P  E    LP  FE    L  L  + C+ L +L
Sbjct: 548  FNTKVFPKM--KKLRLLKIYCNDHDGLPREEYKVLLPKDFEFPHDLRYLHWQRCT-LTSL 604

Query: 603  PDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP---------RTF 653
            P N    ++L  I   +S I QL         L+ +D S+ K L   P         R  
Sbjct: 605  PWNFYG-KHLLEINLKSSNIKQLWKGNKRLKELKGIDLSNSKQLVKMPKFSSMPNLERLN 663

Query: 654  LLGLSAMGLLHISD--------------YAVREIPQEIAYLSSLEILYLSG-NNFESLPA 698
            L G + +  LH S                 ++ +P  I  L SLE L L+G +N E+   
Sbjct: 664  LEGCTRLRELHSSIGHLTRLDPLNLENCRNLKSLPNSICGLKSLEGLSLNGCSNLEAFSE 723

Query: 699  IIKQMSQLRFIHLEDFNM--LQSLPELPLCLKYLHLIDCKMLQSLPVLP---FCLESLDL 753
            I + M QL  + L +  +  L S  E    LK L LI+C+ L +LP       CL SL +
Sbjct: 724  ITEDMEQLERLFLRETGISELPSSIEHMRGLKSLELINCENLVALPNSIGNLTCLTSLHV 783

Query: 754  TGCNMLRSLPE----LPLCLQYLNLEDCNMLRS-LPELPLCLQLLTVRNC--NRLQSLPE 806
              C  L +LP+    L  CL  L+L  CN++   +P    CL  L   N   N ++ +P 
Sbjct: 784  RNCPKLHNLPDNLRSLQCCLTMLDLGGCNLMEEEIPNDLWCLSSLEFLNVSENHMRCIPA 843

Query: 807  ILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLR 866
             +  L +L   ++     H P L+   E L S+    E   C  L  + ++         
Sbjct: 844  GITQLCKLGTLLM----NHCPMLEVIGE-LPSSLGWIEAHGCPSLETETSSS-------- 890

Query: 867  IRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLPPHSSC 925
               +  +SL    +  I  +L+      I++PGS  IP+W S+Q  G  + ++LP +   
Sbjct: 891  ---LLWSSLLKHLKSPIQRRLN------IIIPGSSGIPEWVSHQRMGCEVSVELPMNWYE 941

Query: 926  RNLIGFAFCAVLDSKKVDSD-CFRYFYVSFQFDLEIKTLSETKHVD-------------- 970
             N +   F        +D D C R      +  L I    +T+ +D              
Sbjct: 942  DNNLLLGFVLFFHHVPLDDDECVRTSGFIPECKLAISHGDQTERLDNISFYHRCKTYSIS 1001

Query: 971  -LGYNSRYIEDLIDSDRVI-LGFKPCLNV----------GFPDGYHHTIATFKFF-AERK 1017
             L Y+SR  +    SD  + + + P + +           F   + + +    F   E  
Sbjct: 1002 GLSYSSRRYDSGSTSDPALWVTYFPQIRIPSKYRSRKWNNFKAHFDNPVGNASFTCGENA 1061

Query: 1018 FYKIKRCGLCPVYA 1031
             +K+K CG+  +YA
Sbjct: 1062 SFKVKSCGIHLIYA 1075


>gi|359486106|ref|XP_002274951.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1320

 Score =  338 bits (867), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 330/1087 (30%), Positives = 495/1087 (45%), Gaps = 155/1087 (14%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNI-- 77
            KTT+AK I+D+ S +FE   FV ++R NS   G L HLQ Q+L   L E+      N+  
Sbjct: 228  KTTIAKVIYDKLSCKFECMSFVENIRENSNKQG-LTHLQNQLLGDILEEERSQNINNVDV 286

Query: 78   -PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
                 +  +   ++ I+LDDV+   QL+ L+      G+GSR+++TTR++ +L     E 
Sbjct: 287  GASMIRTALSSKRVFIILDDVDHRKQLEALLRHRGWLGKGSRVIITTRNRHLL--IEQEV 344

Query: 137  KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
               Y V GL  EEA E F   AFK+N    D    S  +V Y +G PL LEVLGS L   
Sbjct: 345  DDSYEVEGLNSEEACELFSLHAFKQNLPKSDFINLSHHMVDYCQGLPLALEVLGSLLFNM 404

Query: 197  RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
                W   LH L +   +EIHD+   LK S+  L    K I LD+ACFF+GE++DFV  +
Sbjct: 405  TIPQWESQLHKLAKEPMAEIHDV---LKSSYGGLDRTEKDILLDVACFFKGEERDFVLRM 461

Query: 257  LDDSESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
            LD      +  L +K L+++  N  + MHD++Q+M  +IVR+   KEP K SRLWD  +I
Sbjct: 462  LDACAEIGIQNLKNKCLITLPYNHMIGMHDLIQQMCWKIVRENFPKEPNKWSRLWDAHDI 521

Query: 316  SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY--VPKFYEIEKLPSM 373
               L   KG   +E I LDLSK+K ++ D   FT M++LRL K +  V  + ++E+    
Sbjct: 522  ECALTTFKGIKKVETISLDLSKLKRVSFDSNVFTKMTSLRLLKVHSGVDCYEDMEEKHYD 581

Query: 374  STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
              ++  + SK++L  G D+         + +Y LR          LVEL+L  S ++Q W
Sbjct: 582  VVKK--NASKMRL--GPDF--------EFPSYHLR---------KLVELHLNWSNIKQLW 620

Query: 434  EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG- 492
                       Q  KYL  L                      I+ SY   LI+  + S  
Sbjct: 621  -----------QENKYLEGLR--------------------VIDLSYSRELIQMLEFSSM 649

Query: 493  -KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
              + RL L G  ++ ++  S+  +  L  L LRGC  LK +  S   L SL  L L  C 
Sbjct: 650  PNLERLILQGCLSLIDIHPSVGNMKKLTTLSLRGCDNLKDLPDSIGDLESLEILDLTDCS 709

Query: 551  NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
              E FPE    M+ LK ++   T I +LP+S  NL  L++L++ DCSK D  P+  G+++
Sbjct: 710  RFEKFPEKGGNMKSLKELFLRNTAIKDLPNSIGNLESLKILYLTDCSKFDKFPEKGGNMK 769

Query: 611  YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV 670
             L  +    +AI  LP S+     L +LD S C   E FP      + ++  L +   A+
Sbjct: 770  SLKELSLINTAIKDLPDSIGDLESLETLDLSDCSKFEKFPEKG-GNMKSLKELFLIKTAI 828

Query: 671  REIPQEIAYLSSLEILYLS-----------GNNFES-------------LPAIIKQMSQL 706
            +++P  I  L SLE+L LS           G N +S             LP  I  +  L
Sbjct: 829  KDLPNSIGDLGSLEVLDLSYYSRFEKFPEKGGNMKSLEVLILKNSAIKDLPDSIGDLESL 888

Query: 707  RFIHLEDFNMLQSLPELPLCLKYLH---LIDCKMLQSLPVLPFCLES---LDLTGCNMLR 760
              + L D +  +  PE    +K L    LI+   ++ LP     LES   LDL+ C+   
Sbjct: 889  ETLDLSDCSRFEKFPEKGGNMKSLENLFLINT-AIKDLPDSIGDLESLEILDLSDCSKFE 947

Query: 761  SLPELPLCLQY---LNLEDCNM--LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELD 815
              PE+   +++   LNL    +  L S  +    L+ L +  C  L+SLP+ +  L+ L+
Sbjct: 948  KFPEMKRGMKHLYKLNLRRTTIEELTSSIDNLSGLRNLIIAECKSLRSLPDNISRLKFLE 1007

Query: 816  ASVLEKLSKHSPDLQWAPESLKSAAIC----FEFTNCLKLNGK---------------AN 856
              +L   S    DL W  E L S  +C       + C K+ G+                 
Sbjct: 1008 TLILSGCS----DL-W--EGLISNQLCNLGKLNISQC-KMAGQILELPSSLEEIDAHDCR 1059

Query: 857  NKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSIC 916
            +K    SLL I H       L +  +  E+L   +   I+   S  P+W   Q+ G+ + 
Sbjct: 1060 SKEDLSSLLWICH-------LNWLKSTTEELKCWKLRAIIPENSGNPEWIRYQNLGTEVT 1112

Query: 917  IQLPPH-SSCRNLIGFAFCAVLDSKKVDSDCFRYFYV------SFQFDLEIKTLSETKHV 969
             +LP +     + +GF    V  S    SD   YF           F+ + K L      
Sbjct: 1113 TELPTNWYEDPDFLGFVVSCVCRSIPT-SDGHSYFLGCALKLHGNGFEFKDKCL-----F 1166

Query: 970  DLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGLCPV 1029
            D       I DL+  D+V + + P   +  P  +HH           K+ +IK+CG+  +
Sbjct: 1167 DCQCKCHGINDLV--DQVWVWWYP--KIAIPKEHHHKYTHINASFRGKWTEIKKCGINLI 1222

Query: 1030 YANPSET 1036
            +A   + 
Sbjct: 1223 FAGDQQN 1229


>gi|359495272|ref|XP_002276182.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1003

 Score =  338 bits (867), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 247/667 (37%), Positives = 357/667 (53%), Gaps = 84/667 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           SD V++VGI GMGGIGKTTLA+AI+ Q S++FE   F+     N      L  L +++LS
Sbjct: 206 SDDVRMVGICGMGGIGKTTLARAIYSQVSNQFEACSFLE--IANDFKEQDLTSLAEKLLS 263

Query: 64  TTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
             L E+ L++ G       K R+   K+L+VLD+VN +  L+ L G  D FGQGSRI+VT
Sbjct: 264 QLLQEENLKIKGSTS---IKARLHSRKVLVVLDNVNNLTILEHLAGNQDWFGQGSRIIVT 320

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TRD+R+L + + +  ++   NG   +EAFE   + + K      DL   SR ++ Y KG 
Sbjct: 321 TRDQRLLIQHKVDYYEVAEFNG---DEAFEFLKHHSLKYELLENDLQELSREIIFYAKGL 377

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L VLGS L    K  W   L  L      EI ++   L++S+++L    K+IFLDIA
Sbjct: 378 PLALRVLGSLLFGMNKDEWRDYLVKLKSTPNIEIQEV---LRLSYDRLDDEEKNIFLDIA 434

Query: 243 CFFEGEDKDFVASILDD---SESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQE 298
           CFF+GEDKD V  IL     S    +  LI+KSL++I+  N L MHD++QEMG+ IVRQE
Sbjct: 435 CFFKGEDKDHVVEILKGCGFSAKCGIKTLINKSLITINFANKLEMHDLIQEMGKGIVRQE 494

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLF 357
             KEP +RSRLW+ ++I  VLK N G++ IEGIFL+LS ++  ++    AF  M  LRL 
Sbjct: 495 CPKEPERRSRLWEHEDIFDVLKRNMGSEKIEGIFLNLSHLEDTLDFTIEAFAGMKKLRLL 554

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYS-----KVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           K Y  K        S+S + + +++     +V+  +   +    LRYL+W  Y L++LP 
Sbjct: 555 KVYNSK--------SISRDFRDTFNNKVNCRVRFAHEFKFCSNDLRYLYWHGYSLKSLPK 606

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           +F PK+LVEL++  S +++ W+G                    K  + L+S         
Sbjct: 607 DFSPKHLVELSMPYSHIKKLWKG-------------------IKVLERLKS--------- 638

Query: 473 PVTINFSYCVNLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
              I+ S+   LI+ P  SG   + RL L G   + +V  S+  L  L  L L+ C  L+
Sbjct: 639 ---IDLSHSKYLIQTPDFSGITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNCTMLR 695

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP----SSFENL 585
           R+ +S C L+SL T IL GC   E FPE    +E LK +++D     +L     S   N+
Sbjct: 696 RLPSSTCSLKSLETFILSGCSKFEEFPENFGNLEMLKELHADGIVNLDLSYCNISDGANV 755

Query: 586 PGLEVLFVEDCSKLD-----NLPDNIGSLEYLYYILAAA----SAISQLPSSVALSNMLR 636
            GL  L   +   L       LP N+  L +L  +         A+SQLPSS+      R
Sbjct: 756 SGLGFLVSLEWLNLSGNNFVTLP-NMSGLSHLETLRLGNCKRLEALSQLPSSI------R 808

Query: 637 SLDSSHC 643
           SL++ +C
Sbjct: 809 SLNAKNC 815



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 167/421 (39%), Gaps = 89/421 (21%)

Query: 681  SSLEILYLSGNNFESLPAIIKQMSQLRFIHLE-DFNMLQSLPELPLCLKYLHLIDCKMLQ 739
            + L  LY  G + +SLP   K  S    + L   ++ ++ L +    L+ L  ID    +
Sbjct: 589  NDLRYLYWHGYSLKSLP---KDFSPKHLVELSMPYSHIKKLWKGIKVLERLKSIDLSHSK 645

Query: 740  SLPVLP-----FCLESLDLTGC-NMLRSLPELPLC--LQYLNLEDCNMLRSLPELPLCLQ 791
             L   P       LE L L GC N+ +  P L +   L +L+L++C MLR LP     L+
Sbjct: 646  YLIQTPDFSGITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNCTMLRRLPSSTCSLK 705

Query: 792  LL---TVRNCNRLQSLPEI---LLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEF 845
             L    +  C++ +  PE    L  L+EL A  +  L     DL +   S  +      F
Sbjct: 706  SLETFILSGCSKFEEFPENFGNLEMLKELHADGIVNL-----DLSYCNISDGANVSGLGF 760

Query: 846  TNCLK-LNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSL---------- 894
               L+ LN   NN +   ++  + H+   +LRLG    + E LS+L  S+          
Sbjct: 761  LVSLEWLNLSGNNFVTLPNMSGLSHLE--TLRLGNCKRL-EALSQLPSSIRSLNAKNCTS 817

Query: 895  -------------------IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCA 935
                               +V+PGS IPDW   QSS + I   LP + S  N +GFA   
Sbjct: 818  LGTTELLNLLLTTKDSTFGVVIPGSRIPDWIRYQSSRNVIEADLPLNWST-NCLGFALAL 876

Query: 936  VLDSK-----------KVDSD---CFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDL 981
            V   +           +V  D   C R F     F +E    +E  HV            
Sbjct: 877  VFGGRFPVAYDDWFWARVFLDFGTCRRSFETGISFPMENSVFAEGDHV------------ 924

Query: 982  IDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGLCPVYANPSETKDNTF 1041
                  +L F P      P    H  ATF   +   +Y+IKRCGL  +Y N     ++ F
Sbjct: 925  ------VLTFAPVQPSLSPHQVIHIKATFAIMSVPNYYEIKRCGLGLMYVNEEVNFNSLF 978

Query: 1042 T 1042
            +
Sbjct: 979  S 979



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 123/298 (41%), Gaps = 60/298 (20%)

Query: 550 LNLEHFPEILE---------KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED---CS 597
           LNL H  + L+         K   L ++Y+ ++   +   +F N     V F  +   CS
Sbjct: 529 LNLSHLEDTLDFTIEAFAGMKKLRLLKVYNSKSISRDFRDTFNNKVNCRVRFAHEFKFCS 588

Query: 598 K-----------LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK-- 644
                       L +LP +  S ++L  +    S I +L   + +   L+S+D SH K  
Sbjct: 589 NDLRYLYWHGYSLKSLPKDF-SPKHLVELSMPYSHIKKLWKGIKVLERLKSIDLSHSKYL 647

Query: 645 -------GLESFPRTFLLGL-------SAMGLLHISDY-------AVREIPQEIAYLSSL 683
                  G+ +  R  L G         ++G+L   ++        +R +P     L SL
Sbjct: 648 IQTPDFSGITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNCTMLRRLPSSTCSLKSL 707

Query: 684 EILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
           E   LSG + FE  P     +  L+ +H +          + L L Y ++ D   +  L 
Sbjct: 708 ETFILSGCSKFEEFPENFGNLEMLKELHADGI--------VNLDLSYCNISDGANVSGLG 759

Query: 743 VLPFCLESLDLTGCNMLRSLPELPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNC 798
            L   LE L+L+G N + +LP +     L+ L L +C  L +L +LP  ++ L  +NC
Sbjct: 760 FL-VSLEWLNLSGNNFV-TLPNMSGLSHLETLRLGNCKRLEALSQLPSSIRSLNAKNC 815


>gi|147821054|emb|CAN77694.1| hypothetical protein VITISV_029044 [Vitis vinifera]
          Length = 1530

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 248/714 (34%), Positives = 361/714 (50%), Gaps = 111/714 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNIP 78
           KTT+AKAI+++ S++++GS F+ ++R  S+  G +  LQK++L   L  K   ++  +  
Sbjct: 230 KTTIAKAIYNEISYQYDGSSFLRNMRERSK--GDILQLQKELLHGILKGKGFRISNVDEG 287

Query: 79  -HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
            +  K  +   ++L++  DV+++ QL+ L  E D F   S I++T+RDK+VL  +     
Sbjct: 288 VNMIKRCLNSKRVLVIFYDVDDLTQLEYLAEEKDWFDVKSTIIITSRDKQVLAHYGVHIS 347

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
             Y V+    +EA E F  +AFK+N   E     S +++ Y  G PL L++LG+SL  K+
Sbjct: 348 --YEVSKFNNKEAIELFSLWAFKQNLPKEAYKNLSYNMIEYADGLPLALKLLGASLFGKK 405

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
            S W   L+ L RI   EI+ +   L+ISF+ L    K IFLD+ACFF+ +DK FV+ IL
Sbjct: 406 ISEWESALYKLKRIPHMEINKV---LRISFDGLDDMDKKIFLDVACFFKEKDKYFVSRIL 462

Query: 258 DDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISR 317
                  +  L DK L++IS N ++MHD++Q+MGR+I+RQE  ++ G+RSR+WD  +   
Sbjct: 463 GPHAEYGIATLNDKCLITISKNMIDMHDLIQQMGREIIRQECPEDLGRRSRVWD-SDAYH 521

Query: 318 VLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEE 377
           VL  N GT AIEG+FLD+ K   I     +F  M  LRL K +    Y++  +      E
Sbjct: 522 VLTRNMGTRAIEGLFLDICKFDPIQFAKESFKQMDRLRLLKIHKGDEYDLISVFGSHPYE 581

Query: 378 QLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK 437
           +L Y    LP   ++   KL YLHWD Y L +LP+NF  K+LVEL LR S ++Q W G K
Sbjct: 582 KLFYEDC-LPRDFEF-SSKLTYLHWDGYSLESLPTNFHAKDLVELILRGSNIKQLWRGNK 639

Query: 438 ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL 497
                                         LH    V IN +Y V+L E P  S      
Sbjct: 640 ------------------------------LHNELKV-INLNYSVHLTEIPDFSS----- 663

Query: 498 YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPE 557
                    VP       +LE+L L GC +L+ +     K + L TL   GC  L+ FPE
Sbjct: 664 ---------VP-------NLEILTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKRFPE 707

Query: 558 ILEKMEHLKRIYSDRTPITELPSS-FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
           I   M  L+ +    T I  LPSS FE+L  LE+L     SKL+ +P +I  L       
Sbjct: 708 IKGNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCL------- 760

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE 676
                           + L  LD SHC  +E                         IP +
Sbjct: 761 ----------------SSLEVLDLSHCNIMEG-----------------------GIPSD 781

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
           I +LSSL+ L L  N+F S+PA I Q+S+L+ ++L     LQ +PELP  L+ L
Sbjct: 782 ICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPELPSSLRLL 835



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/243 (39%), Positives = 138/243 (56%), Gaps = 7/243 (2%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S ++E+P  IE  ++L+ L LR CK LK + +S C+ +SL TL   GC  LE FPEILE 
Sbjct: 1108 SDMKELPI-IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILED 1166

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL-YYILAAAS 620
            M   +++  D T I E+PSS + L GL+ L +  C  L NLP++I +L  L   I+ +  
Sbjct: 1167 MVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCP 1226

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAVREIPQEIA 678
             +++LP ++     L+SL+  + K L+S       L GL ++  L + +  +REIP  I 
Sbjct: 1227 KLNKLPENLG---RLQSLEYLYVKDLDSMNCQLPSLSGLCSLITLQLINCGLREIPSGIW 1283

Query: 679  YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
            +LSSL+ L L GN F S+P  I Q+  L    L    MLQ +PELP  L+YL    C  L
Sbjct: 1284 HLSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQCSSL 1343

Query: 739  QSL 741
            + L
Sbjct: 1344 EIL 1346



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 127/283 (44%), Gaps = 46/283 (16%)

Query: 425  RCSKVEQP----WEGEKACVPSS-------IQNFKYLSALSFKGCQSLRSFPSNL-HFVC 472
            RCS+ +Q     W G   C   S       I+N   L  L  + C++L+S PS++  F  
Sbjct: 1089 RCSECQQEATCRWRG---CFKDSDMKELPIIENPSELDGLCLRDCKTLKSLPSSICEFKS 1145

Query: 473  PVTINFSYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
              T++ S C  L  FP+I   +    +L L  +AI+E+PSSI+ L  L+ L+L  C+ L 
Sbjct: 1146 LTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLV 1205

Query: 530  RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY-SDRTPITELPSSFENLPGL 588
             +  S C L SL TLI++ C  L   PE L +++ L+ +Y  D   +     S   L  L
Sbjct: 1206 NLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCSL 1265

Query: 589  EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
              L + +C  L  +P  I  L  L ++    +  S +P  +     L   D SHC+ L+ 
Sbjct: 1266 ITLQLINCG-LREIPSGIWHLSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQH 1324

Query: 649  FPRTFLLGLSAMGLLHISDYAVREIPQEIAYL-----SSLEIL 686
             P                     E+P  + YL     SSLEIL
Sbjct: 1325 IP---------------------ELPSSLEYLDAHQCSSLEIL 1346



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 131/528 (24%), Positives = 216/528 (40%), Gaps = 105/528 (19%)

Query: 521  DLRGCKRLKRISTSFCKLRSLVTLILLGCL---NLEHFPEILEKMEHLKRIYSDRTPITE 577
            D+R C   ++ +T  C+ R        GC    +++  P I    E       D   +  
Sbjct: 1086 DVRRCSECQQEAT--CRWR--------GCFKDSDMKELPIIENPSELDGLCLRDCKTLKS 1135

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
            LPSS      L  L    CS+L++ P+ +  +     +    +AI ++PSS+     L+ 
Sbjct: 1136 LPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQY 1195

Query: 638  LDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLP 697
            L+ ++C+ L + P +     S   L+ +S   + ++P+ +  L SLE LY+   + +S+ 
Sbjct: 1196 LNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVK--DLDSMN 1253

Query: 698  AIIKQMSQL-RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGC 756
              +  +S L   I L+  N    L E+P  + +L                 L+ L L G 
Sbjct: 1254 CQLPSLSGLCSLITLQLINC--GLREIPSGIWHLS---------------SLQHLSLRG- 1295

Query: 757  NMLRSLPELPLCLQYL---NLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQE 813
            N   S+P+    L  L   +L  C ML+ +PELP  L+ L    C               
Sbjct: 1296 NRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQC--------------- 1340

Query: 814  LDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIA 873
               S LE LS  S  L W+     S   CF+                     RI+   I 
Sbjct: 1341 ---SSLEILSSPST-LLWS-----SLFKCFKS--------------------RIQRQKIY 1371

Query: 874  SLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLPPH-SSCRNLIGF 931
            +L    E  +N K+       + +PGS  IP W S+Q +GS I ++LP +     + +GF
Sbjct: 1372 TLLSVQEFEVNFKVQ------MFIPGSNGIPGWISHQKNGSKITMRLPRYWYENDDFLGF 1425

Query: 932  AFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLI---DSDRVI 988
            A C++     ++ +  R F     F+     L     VD  ++ R  E  +   +S++V 
Sbjct: 1426 ALCSLHVPLDIEEE-NRSFKCKLNFNNRAFLL-----VDDFWSKRNCERCLHGDESNQVW 1479

Query: 989  LGFKPCLNVGFPDGYH----HTIAT-FKFFAERKFYKIKRCGLCPVYA 1031
            L + P      P  YH     T+ T F  +   +  K++RCG   +YA
Sbjct: 1480 LIYYP--KSKIPKKYHSNEYRTLNTSFSEYFGTEPVKVERCGFHFIYA 1525



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 169/439 (38%), Gaps = 106/439 (24%)

Query: 507 VPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLK 566
           +P   E  + L  L   G   L+ + T+F   + LV LIL G  N++      +    LK
Sbjct: 589 LPRDFEFSSKLTYLHWDG-YSLESLPTNF-HAKDLVELILRGS-NIKQLWRGNKLHNELK 645

Query: 567 RI---YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAI 622
            I   YS    +TE+P  F ++P LE+L +E C KL+ LP  I   +YL  +     S +
Sbjct: 646 VINLNYS--VHLTEIPD-FSSVPNLEILTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKL 702

Query: 623 SQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHIS-DYAVREIPQEIAYLS 681
            + P        LR LD S    ++  P +    L A+ +L       + +IP +I  LS
Sbjct: 703 KRFPEIKGNMRKLRELDLSG-TAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLS 761

Query: 682 SLEILYLSGNNF--ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ 739
           SLE+L LS  N     +P+ I  +S L+ ++L+  N  +S+P                  
Sbjct: 762 SLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKS-NDFRSIP------------------ 802

Query: 740 SLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCN 799
                            N L  L       Q LNL  C  L+ +PELP  L+LL     N
Sbjct: 803 --------------ATINQLSRL-------QVLNLSHCQNLQHIPELPSSLRLLDAHGSN 841

Query: 800 RLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKI 859
              S    L                           + S   CF  +    LN  + N++
Sbjct: 842 PTSSRASFL--------------------------PVHSLVNCFN-SEIQDLNCSSRNEV 874

Query: 860 LADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQ 918
            +++ +                         +G  IVLPGS  +P+W  +      I  +
Sbjct: 875 WSENSVSTYGS--------------------KGICIVLPGSSGVPEWIMDD---QGIATE 911

Query: 919 LPPHSSCRN-LIGFAFCAV 936
           LP + +  N  +GFA C V
Sbjct: 912 LPQNWNQNNEFLGFALCCV 930


>gi|332330340|gb|AEE43926.1| TIR-NBS-LRR resistance protein muRdr1B [Rosa multiflora]
          Length = 1157

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 324/1083 (29%), Positives = 476/1083 (43%), Gaps = 232/1083 (21%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +++SD V+ +GIWGMGG+GKTTLA+ ++++ SH+FE   F+++VR  S T G L +LQKQ
Sbjct: 212  IEASD-VRFIGIWGMGGLGKTTLARLVYEKISHQFEVCVFLTNVREVSATHG-LVYLQKQ 269

Query: 61   MLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            +LS  L E+           T  K       +L+VLDDV++  QL+ L GE D FG  SR
Sbjct: 270  ILSHILKEENAQVWNVYSGITMIKRCFCNKAVLLVLDDVDQSEQLEHLAGEKDWFGLRSR 329

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            I+ TTR++RVL    G EK  Y + GL   EA + F   AF++    ED     +S V +
Sbjct: 330  IIFTTRNQRVLVT-HGVEKP-YELKGLNNAEALQLFSWKAFRKCEPEEDYAELCKSFVMH 387

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL L+ LGS L  +    W   L  L    +     ++D+LK+S++ L    K IF
Sbjct: 388  AGGLPLALKTLGSFLYKRSPDAWNSALAKLRNTPDK---TVFDMLKVSYDGLDEMEKKIF 444

Query: 239  LDIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQI 294
            LDIACF       F+  +L   D      +++L+++SLV+IS N  + MHD+++EMG +I
Sbjct: 445  LDIACFSSQCQAKFIIELLYSYDVCIGIAIEVLVERSLVTISSNNEIGMHDLIREMGCEI 504

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            VRQ+S +EPG  SRLW   +I  V   N GT+AIEGIFL L K++G + +P AF+ M NL
Sbjct: 505  VRQQSPEEPGGCSRLWLRNDIFHVFTKNTGTEAIEGIFLHLHKLEGADWNPEAFSKMCNL 564

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            +L   +                       ++L  G   LP  LR L W  YPL++LP  F
Sbjct: 565  KLLYIH----------------------NLRLSLGPKSLPDALRILKWSWYPLKSLPPGF 602

Query: 415  KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
            +P  L EL+   S ++  W G            KYL  L                     
Sbjct: 603  QPDELTELSFVHSNIDHLWNG-----------IKYLGNLK-------------------- 631

Query: 475  TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            +I  SY +NLI  P  +G                     + +LE L L GC  L +I  S
Sbjct: 632  SIVLSYSINLIRTPDFTG---------------------IPNLEKLVLEGCTNLVKIHPS 670

Query: 535  FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
               L+ L                   K+ + +   S +T    LPS   N+  LE   V 
Sbjct: 671  IALLKRL-------------------KIWNFRNCKSIKT----LPSEV-NMEFLETFDVS 706

Query: 595  DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA-LSNMLRSLDSSHCKGLESFPRTF 653
             CSKL  +P+ +G  + L  +    +A+ +LPSS+  LS  L  LD              
Sbjct: 707  GCSKLKMIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLSESLVGLD-------------- 752

Query: 654  LLGLSAMGLLHISDYAVREIPQEI----AYLSSLEILYLSGNNFESLP--AIIKQMSQLR 707
                       +S   +RE P  +      ++S   L+   ++   +P  A +K  S L+
Sbjct: 753  -----------LSGIVIREQPYSLFLKQNVIASSLGLFPRKSHHPLIPVLASLKHFSSLK 801

Query: 708  FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP- 766
             ++L D N+ +   E+P  +  L  ++C               L+L G N + SLP    
Sbjct: 802  ELNLNDCNLCEG--EIPNDIGSLSSLEC---------------LELGGNNFV-SLPASIH 843

Query: 767  -LC-LQYLNLEDCNMLRSLPELPLCLQL-LTVRNCNRLQSLPEILLCLQELDASVLEKLS 823
             LC L  +N+E+C  L+ LPELP+   L +T  NC  LQ  PE+                
Sbjct: 844  LLCRLGSINVENCKRLQQLPELPVSGSLRVTTVNCTSLQVFPEL---------------- 887

Query: 824  KHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKI----LADSLLRIRHMAIASLRLGY 879
               PDL       + +A      NCL   G  +       + + LL + ++         
Sbjct: 888  --PPDL------CRLSAFSLNSVNCLSTIGNQDASFFLYSVINRLLEVTYVTYVRSLSLS 939

Query: 880  EMAINEKLSELRGSL--------------IVLPGSEIPDWFSNQSSGSSICIQLPPHSSC 925
                      L  SL               ++PGSEIP+WF+NQS+G S+  +LP  +  
Sbjct: 940  LSLSLSLSLSLSLSLSRSLETHLSFEFLNFLIPGSEIPEWFNNQSAGDSVTEKLPWDACN 999

Query: 926  RNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKT-LSETKHVDLGYNSRYIEDL--- 981
               IGFA CA++  +   S       V    DL+  T L      + G N      L   
Sbjct: 1000 SKWIGFAVCALIVPQDNPSA------VPEDPDLDPDTCLISCNWSNYGINGVVGRGLCVR 1053

Query: 982  -IDSDRVILGFKP--------CLNVGFPDGYHHTIATFKFFAERKFYKIKRCGLCPVYAN 1032
              DSD + L   P        C  V F         T +     +  K+K+CG+  +Y  
Sbjct: 1054 QFDSDHLWLLVLPSPFRKPKNCREVNF------VFQTARAVGNNRCMKVKKCGVRALYEQ 1107

Query: 1033 PSE 1035
             +E
Sbjct: 1108 DTE 1110


>gi|105922680|gb|ABF81430.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1282

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 228/639 (35%), Positives = 342/639 (53%), Gaps = 67/639 (10%)

Query: 10  VGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK 69
           +GI GMGG+GKTT+A+ ++D+   +FEGSCF+++VR       G   LQ+Q+LS  L E+
Sbjct: 257 IGICGMGGLGKTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEILMER 316

Query: 70  LEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRV 128
             V   +      K R +R K+L+VLDDV++  QL+ L  E   FG GSRI++T+RDK+V
Sbjct: 317 ASVCDSSRGIEMIKRRSQRKKILVVLDDVDDHKQLESLAAESKWFGPGSRIIITSRDKQV 376

Query: 129 LEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEV 188
           L   R    +IY    L  ++A   F   AF+ +   ED    S+ VV Y  G PL LEV
Sbjct: 377 LT--RNGVARIYEAEKLNDDDALMLFSQKAFENDQPAEDFLDLSKQVVGYANGLPLALEV 434

Query: 189 LGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGE 248
           +GS L  +    W   ++ +N I +   H+I  +L +SF+ L    K IFLDIACF +G 
Sbjct: 435 IGSFLHGRSIPEWRGAINRMNEIPD---HEIIKVLLVSFDGLHELEKKIFLDIACFLKGF 491

Query: 249 DKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGK 305
             D +  ILD      S  + +LI++SL+S+S + + MH++LQ+MG++I+R+ES +EPG+
Sbjct: 492 KIDRITRILDGRGFHASIGIPVLIERSLISVSRDQVWMHNLLQKMGKEIIRRESPEEPGR 551

Query: 306 RSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFY 365
           RSRLW  K++   L  N G + IE IFLD+  IK    +  AF+ MS LRL K       
Sbjct: 552 RSRLWTYKDVCLALMDNIGKEKIEAIFLDMPGIKEAQWNMEAFSKMSRLRLLKI------ 605

Query: 366 EIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLR 425
                           + VQL  G + L  KLR+L W +YP ++LP++ +   LVEL++ 
Sbjct: 606 ----------------NNVQLSEGPEDLSNKLRFLEWHSYPSKSLPASLQVDELVELHMA 649

Query: 426 CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLI 485
            S +EQ W G K             SA++ K                   IN S  +NL 
Sbjct: 650 NSSIEQLWYGCK-------------SAINLK------------------IINLSNSLNLS 678

Query: 486 EFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLV 542
           + P ++G   +  L L G +++ EV  S+     L+ ++L  CK + RI  +  ++ SL 
Sbjct: 679 KTPNLTGIPNLESLILEGCTSLSEVHPSLALHKKLQHVNLVNCKSI-RILPNNLEMESLK 737

Query: 543 TLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNL 602
              L GC  LE FP+I+  M  L  +  D T IT+LPSS  +L GL +L +  C  L+++
Sbjct: 738 VCTLDGCSKLEKFPDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESI 797

Query: 603 PDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDS 640
           P +IG L+ L  + L+  S +  +P ++     L   D 
Sbjct: 798 PSSIGCLKSLKKLDLSGCSELKCIPENLGKVESLEEFDG 836



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 158/333 (47%), Gaps = 55/333 (16%)

Query: 646 LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQ 705
           +E+F +     +S + LL I++  + E P++++  + L  L       +SLPA + Q+ +
Sbjct: 591 MEAFSK-----MSRLRLLKINNVQLSEGPEDLS--NKLRFLEWHSYPSKSLPASL-QVDE 642

Query: 706 LRFIHLEDFNMLQSLP--ELPLCLKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRS 761
           L  +H+ + ++ Q     +  + LK ++L +   L   P L     LESL L GC  L  
Sbjct: 643 LVELHMANSSIEQLWYGCKSAINLKIINLSNSLNLSKTPNLTGIPNLESLILEGCTSLSE 702

Query: 762 L-PELPLC--LQYLNLEDCNMLRSLPE-LPL-CLQLLTVRNCNRLQSLPEIL-----LCL 811
           + P L L   LQ++NL +C  +R LP  L +  L++ T+  C++L+  P+I+     L +
Sbjct: 703 VHPSLALHKKLQHVNLVNCKSIRILPNNLEMESLKVCTLDGCSKLEKFPDIIGNMNCLMV 762

Query: 812 QELDASVLEKLSKHSPDLQWAP----------ESLKSAAICFEFTNCLKLNGKANNKILA 861
             LD + + KL      L              ES+ S+  C +    L L+G +  K + 
Sbjct: 763 LRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKCIP 822

Query: 862 DSLLRIRHM----AIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICI 917
           ++L ++  +     +++ R G+ +A+              PG+EIP WF+++S GSSI +
Sbjct: 823 ENLGKVESLEEFDGLSNPRPGFGIAV--------------PGNEIPGWFNHRSKGSSISV 868

Query: 918 QLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYF 950
           Q+P        +GF  C   ++       F +F
Sbjct: 869 QVPS-----GRMGFFACVAFNANDESPSLFCHF 896


>gi|359477831|ref|XP_002282906.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 879

 Score =  337 bits (865), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 230/623 (36%), Positives = 337/623 (54%), Gaps = 62/623 (9%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           + V+++GI G GG+GKTT+AKAI+++ S +++GS F+ ++R  S+  G +  LQ+++L  
Sbjct: 215 NEVRVIGICGTGGVGKTTIAKAIYNEISCQYDGSSFLRNMRERSK--GDILQLQQELLHG 272

Query: 65  TLSEK---LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
            L  K   +      I    K  +   ++LI+ DDV+E+ QL+ L  E D F   S I++
Sbjct: 273 ILRGKFFKINTVDEGIS-MIKRCLSSNRVLIIFDDVDELKQLEYLAEEKDWFQAKSTIII 331

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           T+RDK VL ++  +    Y V+ L  EEA E F  +AFK+NH  E     S +++ Y  G
Sbjct: 332 TSRDKHVLARYGVDIP--YEVSKLNKEEAIELFSLWAFKQNHPKEVYKNLSYNIIDYANG 389

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L+VLG+SL  K+ S W   +  L  I   EIH++   L+ISF+ L    K IFLD+
Sbjct: 390 LPLALKVLGASLFGKKISEWESAMCKLKIIPHMEIHNV---LRISFDGLDDVDKGIFLDV 446

Query: 242 ACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           ACFF+G+DK FV+ IL       +  L D+ L+++S N L+MHD++Q+MG +I+RQE  K
Sbjct: 447 ACFFKGDDKYFVSRILGPHAKHGITTLADRCLITVSKNRLDMHDLIQQMGWEIIRQECPK 506

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
           +PG+RSRLWD      VL  N GT AIEG+FLD  K     L   +F  M+ LRL K + 
Sbjct: 507 DPGRRSRLWDSNAY-HVLIRNMGTQAIEGLFLDRCKFNPSQLTMESFKEMNKLRLLKIHN 565

Query: 362 PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVE 421
           P+     KL          + +  LP   ++   +LRYLHWD YPL +LP NF  KNLVE
Sbjct: 566 PR----RKL----------FLENHLPRDFEFSAYELRYLHWDGYPLESLPMNFHAKNLVE 611

Query: 422 LNLRCSKVEQPWEGEKAC----------------VP--SSIQNFKYLSALSFKGCQSLRS 463
           L+LR S ++Q W G K                  +P  SS+ N   L  L+ +GC +L  
Sbjct: 612 LSLRDSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDLSSVPN---LEILTLEGCVNLEL 668

Query: 464 FPSNLHFVCPV-TINFSYCVNLIEFPQISGKVTRLY---LGQSAIEEVPSSIECLTDLEV 519
            P  ++ +  + T++ + C  L  FP+I   + +L    L  +AI ++PSSI  L  L+ 
Sbjct: 669 LPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAIMDLPSSITHLNGLQT 728

Query: 520 LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYS-------DR 572
           L L+ C +L +I +  C L SL  L L G     HF  I   +  L R+ +       + 
Sbjct: 729 LLLQECSKLHQIPSHICYLSSLKKLNLEGG----HFSSIPPTINQLSRLKALNLSHCNNL 784

Query: 573 TPITELPSSFENLPGLEVLFVED 595
             I ELPS      G   L+  D
Sbjct: 785 EQIPELPSVKVARCGFHFLYAHD 807



 Score = 46.2 bits (108), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 39/261 (14%)

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTPI---TELPSSFENLPGLEVLFVE-DCSKLDNLPDN 605
           L +E F E + K+  LK I++ R  +     LP  FE     E+ ++  D   L++LP N
Sbjct: 547 LTMESFKE-MNKLRLLK-IHNPRRKLFLENHLPRDFE-FSAYELRYLHWDGYPLESLPMN 603

Query: 606 IGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC------KGLESFPRTFLLGLSA 659
             + + L  +    S I Q+     L + LR +D SH         L S P   +L L  
Sbjct: 604 FHA-KNLVELSLRDSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDLSSVPNLEILTLEG 662

Query: 660 MGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
              L +       +P+ I  L  L+ L  +G +  E  P I+  M +LR + L       
Sbjct: 663 CVNLEL-------LPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSG----T 711

Query: 719 SLPELPLCLKYLH------LIDCKMLQSLPVLPFC----LESLDLTGCNMLRSLPELPLC 768
           ++ +LP  + +L+      L +C  L  +P    C    L+ L+L G +     P +   
Sbjct: 712 AIMDLPSSITHLNGLQTLLLQECSKLHQIPS-HICYLSSLKKLNLEGGHFSSIPPTINQL 770

Query: 769 --LQYLNLEDCNMLRSLPELP 787
             L+ LNL  CN L  +PELP
Sbjct: 771 SRLKALNLSHCNNLEQIPELP 791


>gi|357514797|ref|XP_003627687.1| NBS resistance protein [Medicago truncatula]
 gi|355521709|gb|AET02163.1| NBS resistance protein [Medicago truncatula]
          Length = 795

 Score =  337 bits (865), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 238/619 (38%), Positives = 332/619 (53%), Gaps = 75/619 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DSS+ VQI+G+WGMGG GKTTLA A+F + S  +EG CF+ +V   SE  G +     +
Sbjct: 208 IDSSE-VQIIGVWGMGGTGKTTLAAAMFQRVSSHYEGHCFLENVTEQSEKHG-INDTCNK 265

Query: 61  MLSTTLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF-GQGSR 118
           +LS  L E L++     IP   + R++RMK  IVLDDV+    L+ LIG    + G GS 
Sbjct: 266 LLSKLLGEDLDITTLKVIPSMIRRRLKRMKSFIVLDDVHTSELLQNLIGVGHGWLGAGST 325

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           ++VTTRDK VL    G  ++IY V  +  + + + FC  AF      E     S+  + Y
Sbjct: 326 VIVTTRDKHVL--ISGGIEEIYEVKKMNSQNSLQLFCLNAFDTVFPKEGFVELSKRAIDY 383

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
            KG PL L+VLGSSL  K +  W   L  L +I  +EI  I   L+ S+N+L  + K+IF
Sbjct: 384 AKGIPLALKVLGSSLRCKSEIEWNCALSKLEKISNAEIDRI---LRWSYNELDDKEKNIF 440

Query: 239 LDIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQI 294
           LDIACFF+G +++ V  IL+D    +D+ +  L+DK+L+ +   NF+ MHD++QEMGRQI
Sbjct: 441 LDIACFFKGRERNSVTKILNDCGFFADIGISHLLDKALIRVDYKNFIQMHDLIQEMGRQI 500

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VR+ES K PG+RSRL DPKE+  VLK+N+G++ IE IFLD ++   INL+P+AF  M NL
Sbjct: 501 VREESLKNPGQRSRLCDPKEVFDVLKNNRGSEIIEAIFLDATEYTHINLNPKAFEKMVNL 560

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL  F                 +      V LP+GLD LP+ LRY  WD YP ++LP  F
Sbjct: 561 RLLAF----------------RDHKGVKSVSLPHGLDSLPETLRYFLWDGYPWKSLPPTF 604

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             + LVEL+++ S VE+ W G        + +   L  L     +               
Sbjct: 605 CAEMLVELSMQESHVEKLWNG--------VLDMPNLEVLDLGRSR--------------- 641

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIE---EVPSSIECLTDLEVLDLRGCKRLKRI 531
                    LIE P +SG     Y+     E   EV SSI  L  LE L + GC  LK +
Sbjct: 642 --------KLIECPNVSGSPNLKYVTLEDCESMPEVDSSIFLLQKLERLSVLGCTSLKSL 693

Query: 532 STSFCK--LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF---ENLP 586
           S++ C    R L  +    C NL+        ++ L    ++     ELPSS    +NL 
Sbjct: 694 SSNTCSPAFRELNAMF---CDNLKDISVTFASVDGLVLFLTEWDG-NELPSSILHKKNLT 749

Query: 587 GLEVLFVEDCSKLDNLPDN 605
            L V  + DC  L +LP+N
Sbjct: 750 RL-VFPISDC--LVDLPEN 765


>gi|359493229|ref|XP_002264909.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1542

 Score =  337 bits (865), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 248/714 (34%), Positives = 361/714 (50%), Gaps = 111/714 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNIP 78
           KTT+AKAI+++ S++++GS F+ ++R  S+  G +  LQK++L   L  K   ++  +  
Sbjct: 230 KTTIAKAIYNEISYQYDGSSFLRNMRERSK--GDILQLQKELLHGILKGKGFRISNVDEG 287

Query: 79  -HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
            +  K  +   ++L++  DV+++ QL+ L  E D F   S I++T+RDK+VL  +     
Sbjct: 288 VNMIKRCLNSKRVLVIFYDVDDLTQLEYLAEEKDWFDVKSTIIITSRDKQVLAHYGVHIS 347

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
             Y V+    +EA E F  +AFK+N   E     S +++ Y  G PL L++LG+SL  K+
Sbjct: 348 --YEVSKFNNKEAIELFSLWAFKQNLPKEAYKNLSYNMIEYADGLPLALKLLGASLFGKK 405

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
            S W   L+ L RI   EI+ +   L+ISF+ L    K IFLD+ACFF+ +DK FV+ IL
Sbjct: 406 ISEWESALYKLKRIPHMEINKV---LRISFDGLDDMDKKIFLDVACFFKEKDKYFVSRIL 462

Query: 258 DDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISR 317
                  +  L DK L++IS N ++MHD++Q+MGR+I+RQE  ++ G+RSR+WD  +   
Sbjct: 463 GPHAEYGIATLNDKCLITISKNMIDMHDLIQQMGREIIRQECPEDLGRRSRVWD-SDAYH 521

Query: 318 VLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEE 377
           VL  N GT AIEG+FLD+ K   I     +F  M  LRL K +    Y++  +      E
Sbjct: 522 VLTRNMGTRAIEGLFLDICKFDPIQFAKESFKQMDRLRLLKIHKGDEYDLISVFGSHPYE 581

Query: 378 QLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK 437
           +L Y    LP   ++   KL YLHWD Y L +LP+NF  K+LVEL LR S ++Q W G K
Sbjct: 582 KLFYEDC-LPRDFEF-SSKLTYLHWDGYSLESLPTNFHAKDLVELILRGSNIKQLWRGNK 639

Query: 438 ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL 497
                                         LH    V IN +Y V+L E P  S      
Sbjct: 640 ------------------------------LHNELKV-INLNYSVHLTEIPDFSS----- 663

Query: 498 YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPE 557
                    VP       +LE+L L GC +L+ +     K + L TL   GC  L+ FPE
Sbjct: 664 ---------VP-------NLEILTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKRFPE 707

Query: 558 ILEKMEHLKRIYSDRTPITELPSS-FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
           I   M  L+ +    T I  LPSS FE+L  LE+L     SKL+ +P +I  L       
Sbjct: 708 IKGNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCL------- 760

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE 676
                           + L  LD SHC  +E                         IP +
Sbjct: 761 ----------------SSLEVLDLSHCNIMEG-----------------------GIPSD 781

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
           I +LSSL+ L L  N+F S+PA I Q+S+L+ ++L     LQ +PELP  L+ L
Sbjct: 782 ICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPELPSSLRLL 835



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/243 (39%), Positives = 138/243 (56%), Gaps = 7/243 (2%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S ++E+P  IE  ++L+ L LR CK LK + +S C+ +SL TL   GC  LE FPEILE 
Sbjct: 1108 SDMKELPI-IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILED 1166

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL-YYILAAAS 620
            M   +++  D T I E+PSS + L GL+ L +  C  L NLP++I +L  L   I+ +  
Sbjct: 1167 MVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCP 1226

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAVREIPQEIA 678
             +++LP ++     L+SL+  + K L+S       L GL ++  L + +  +REIP  I 
Sbjct: 1227 KLNKLPENLG---RLQSLEYLYVKDLDSMNCQLPSLSGLCSLITLQLINCGLREIPSGIW 1283

Query: 679  YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
            +LSSL+ L L GN F S+P  I Q+  L    L    MLQ +PELP  L+YL    C  L
Sbjct: 1284 HLSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQCSSL 1343

Query: 739  QSL 741
            + L
Sbjct: 1344 EIL 1346



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 127/283 (44%), Gaps = 46/283 (16%)

Query: 425  RCSKVEQP----WEGEKACVPSS-------IQNFKYLSALSFKGCQSLRSFPSNL-HFVC 472
            RCS+ +Q     W G   C   S       I+N   L  L  + C++L+S PS++  F  
Sbjct: 1089 RCSECQQEATCRWRG---CFKDSDMKELPIIENPSELDGLCLRDCKTLKSLPSSICEFKS 1145

Query: 473  PVTINFSYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
              T++ S C  L  FP+I   +    +L L  +AI+E+PSSI+ L  L+ L+L  C+ L 
Sbjct: 1146 LTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLV 1205

Query: 530  RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY-SDRTPITELPSSFENLPGL 588
             +  S C L SL TLI++ C  L   PE L +++ L+ +Y  D   +     S   L  L
Sbjct: 1206 NLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCSL 1265

Query: 589  EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
              L + +C  L  +P  I  L  L ++    +  S +P  +     L   D SHC+ L+ 
Sbjct: 1266 ITLQLINCG-LREIPSGIWHLSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQH 1324

Query: 649  FPRTFLLGLSAMGLLHISDYAVREIPQEIAYL-----SSLEIL 686
             P                     E+P  + YL     SSLEIL
Sbjct: 1325 IP---------------------ELPSSLEYLDAHQCSSLEIL 1346



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 156/366 (42%), Gaps = 76/366 (20%)

Query: 589  EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
            E+  +E+ S+LD L             L     +  LPSS+     L +L  S C  LES
Sbjct: 1112 ELPIIENPSELDGL------------CLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLES 1159

Query: 649  FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS-GNNFESLPAIIKQMSQLR 707
            FP   L  +     L +   A++EIP  I  L  L+ L L+   N  +LP  I  ++ LR
Sbjct: 1160 FPE-ILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLR 1218

Query: 708  FIHLEDFNMLQSLPE---LPLCLKYLHLIDCKMLQ-SLPVLP-FC-LESLDLTGCNMLRS 761
             + +     L  LPE       L+YL++ D   +   LP L   C L +L L  C  LR 
Sbjct: 1219 TLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCSLITLQLINCG-LRE 1277

Query: 762  LPELPL---CLQYLNLEDCNMLRSLPELPLCLQLLTV---RNCNRLQSLPEILLCLQELD 815
            +P        LQ+L+L   N   S+P+    L  L V    +C  LQ +PE+   L+ LD
Sbjct: 1278 IPSGIWHLSSLQHLSLRG-NRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLD 1336

Query: 816  A---SVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAI 872
            A   S LE LS  S  L W+     S   CF+                     RI+    
Sbjct: 1337 AHQCSSLEILSSPST-LLWS-----SLFKCFKS--------------------RIQ---- 1366

Query: 873  ASLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLPPH-SSCRNLIG 930
                   E  +N K+       + +PGS  IP W S+Q +GS I ++LP +     + +G
Sbjct: 1367 -------EFEVNFKVQ------MFIPGSNGIPGWISHQKNGSKITMRLPRYWYENDDFLG 1413

Query: 931  FAFCAV 936
            FA C++
Sbjct: 1414 FALCSL 1419



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 169/437 (38%), Gaps = 102/437 (23%)

Query: 507 VPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLK 566
           +P   E  + L  L   G   L+ + T+F   + LV LIL G  N++      +    LK
Sbjct: 589 LPRDFEFSSKLTYLHWDG-YSLESLPTNF-HAKDLVELILRGS-NIKQLWRGNKLHNELK 645

Query: 567 RIYSDRT-PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQ 624
            I  + +  +TE+P  F ++P LE+L +E C KL+ LP  I   +YL  +     S + +
Sbjct: 646 VINLNYSVHLTEIPD-FSSVPNLEILTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKR 704

Query: 625 LPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHIS-DYAVREIPQEIAYLSSL 683
            P        LR LD S    ++  P +    L A+ +L       + +IP +I  LSSL
Sbjct: 705 FPEIKGNMRKLRELDLSG-TAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSL 763

Query: 684 EILYLSGNNF--ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           E+L LS  N     +P+ I  +S L+ ++L+  N  +S+P                    
Sbjct: 764 EVLDLSHCNIMEGGIPSDICHLSSLKELNLKS-NDFRSIP-------------------- 802

Query: 742 PVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRL 801
                          N L  L       Q LNL  C  L+ +PELP  L+LL     N  
Sbjct: 803 ------------ATINQLSRL-------QVLNLSHCQNLQHIPELPSSLRLLDAHGSNPT 843

Query: 802 QSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILA 861
            S    L                           + S   CF  +    LN  + N++ +
Sbjct: 844 SSRASFL--------------------------PVHSLVNCFN-SEIQDLNCSSRNEVWS 876

Query: 862 DSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLP 920
           ++ +                         +G  IVLPGS  +P+W  +      I  +LP
Sbjct: 877 ENSVSTYGS--------------------KGICIVLPGSSGVPEWIMDD---QGIATELP 913

Query: 921 PHSSCRN-LIGFAFCAV 936
            + +  N  +GFA C V
Sbjct: 914 QNWNQNNEFLGFALCCV 930


>gi|15239799|ref|NP_199725.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10176947|dbj|BAB10096.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008392|gb|AED95775.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 980

 Score =  337 bits (865), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 252/749 (33%), Positives = 377/749 (50%), Gaps = 135/749 (18%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSET---AGGLEHLQK 59
           + D V++VGIWG  GIGKTT+A+ +  +FS +F  + F+ +VRGN +    +GG  +LQ 
Sbjct: 203 NDDDVRMVGIWGPAGIGKTTIARVLHSRFSGDFRFTVFMENVRGNYQRIVDSGGEYNLQA 262

Query: 60  QMLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           ++    L          I H  K  ER+++ K+LIVL DV++V QL+ L  E   FG GS
Sbjct: 263 RLQKEFLPIIFNQKDRKINHLWKIEERLKKQKVLIVLGDVDKVEQLEALANETRWFGPGS 322

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+VTT+DK++L     E   IY V     + A E  C +AFK+N  P+D       V  
Sbjct: 323 RIIVTTKDKQIL--VGHEINHIYEVKLPCRKTALEILCLYAFKQNVAPDDFMDVVVEVAE 380

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
            +   PL L VLGS +  K K  W     +L R+  S    +  ILKIS++ L  R K++
Sbjct: 381 LSGHLPLGLRVLGSHMRGKSKDRWKL---ELGRLTTSLDEKVEKILKISYDDLHIRDKAL 437

Query: 238 FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF-LNMHDILQEMGRQ 293
           FL IAC F GE+ D V  +L +S+ DV   L +L+DKSL+ I+ +  + MH +L +MG++
Sbjct: 438 FLHIACMFNGENIDLVKQMLVNSDLDVSLGLQLLLDKSLIQINDDREIVMHSLLLKMGKE 497

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMS 352
           +V Q S  EPGKR  L++ KE   +L +N G++A+ GI LD S+I+  + +  R F +M 
Sbjct: 498 VVCQHSS-EPGKRQFLFNTKETCNILSNNTGSEAVLGISLDTSEIQNDVFMSERVFEDMR 556

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NL+  +FY  K   I++ PS+         K+ LP GL+YLP  +R LHWD+YP++ +PS
Sbjct: 557 NLKFLRFYNKK---IDENPSL---------KLHLPRGLNYLPA-VRLLHWDSYPMKYIPS 603

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
            F+P+ LVEL +  SKV + WEG         Q   YL                      
Sbjct: 604 QFRPECLVELRMMHSKVVKLWEG--------TQTLAYLK--------------------- 634

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
             TI+ S+  NL+E P +S  ++                     LE L L GC+ L  + 
Sbjct: 635 --TIDLSFSNNLVEVPDLSKAIS---------------------LETLCLEGCQSLAELP 671

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
           +S   L  L  L L  C  LE  P       H+                  NL  LEVL 
Sbjct: 672 SSVLNLHRLKWLRLTMCEKLEVIPL------HI------------------NLASLEVLD 707

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
           +E C KL + PD   ++E ++      + I ++P S++  + L SLD S C  L+ F   
Sbjct: 708 MEGCLKLKSFPDISKNIERIFM---KNTGIEEIPPSISQWSRLESLDISGCLNLKIFSH- 763

Query: 653 FLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE 712
                               +P+ + Y+      YL+ +  E LP  IK ++ L +++++
Sbjct: 764 --------------------VPKSVVYI------YLTDSGIERLPDCIKDLTWLHYLYVD 797

Query: 713 DFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           +   L SLPELP  +K L  I+C+ L+ +
Sbjct: 798 NCRKLVSLPELPSSIKILSAINCESLERI 826



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 92/419 (21%), Positives = 166/419 (39%), Gaps = 102/419 (24%)

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSF-------------------ENLPGLEVLFVE 594
           H P  L  +  ++ ++ D  P+  +PS F                   E    L  L   
Sbjct: 577 HLPRGLNYLPAVRLLHWDSYPMKYIPSQFRPECLVELRMMHSKVVKLWEGTQTLAYLKTI 636

Query: 595 DCSKLDNL---PDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
           D S  +NL   PD   ++      L    ++++LPSSV   + L+ L  + C+ LE  P 
Sbjct: 637 DLSFSNNLVEVPDLSKAISLETLCLEGCQSLAELPSSVLNLHRLKWLRLTMCEKLEVIP- 695

Query: 652 TFLLGLSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIH 710
              + L+++ +L +     ++  P +I+   ++E +++     E +P  I Q S+L  + 
Sbjct: 696 -LHINLASLEVLDMEGCLKLKSFP-DIS--KNIERIFMKNTGIEEIPPSISQWSRLESLD 751

Query: 711 LEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQ 770
           +     L+    +P  + Y++L D      +  LP C++  DLT              L 
Sbjct: 752 ISGCLNLKIFSHVPKSVVYIYLTD----SGIERLPDCIK--DLT-------------WLH 792

Query: 771 YLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQ 830
           YL +++C  L SLPELP  +++L+  NC  L+ +     C                P+ +
Sbjct: 793 YLYVDNCRKLVSLPELPSSIKILSAINCESLERISSSFDC----------------PNAK 836

Query: 831 WAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSEL 890
                        EF+  +  +G+A   I    +              Y+ A        
Sbjct: 837 ------------VEFSKSMNFDGEARRVITQQWV--------------YKRA-------- 862

Query: 891 RGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRY 949
                 LPG E+P  FS+++ G S+ I L   + C + + F  C +L   + ++ C  Y
Sbjct: 863 -----CLPGKEVPLEFSHRARGGSLTIHLEDENVCSSSLRFKACILLFPSERNNICTVY 916


>gi|255561496|ref|XP_002521758.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223538971|gb|EEF40568.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 876

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 229/554 (41%), Positives = 311/554 (56%), Gaps = 56/554 (10%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +D SD V+I+G+WGMGGIGKTTLA AIFDQ S ++E S F+ +VR   +    L  L+++
Sbjct: 202 LDMSD-VRIIGVWGMGGIGKTTLAGAIFDQISAQYESSYFLGNVREQLKRCL-LAELREK 259

Query: 61  MLSTTLSEK-LEVAGPNIPH-FTKERVRRMKLLIVLDDVNEVGQLKRLI-GELDQFGQGS 117
           + S  L EK L+   PN+ + F K+R+ R K+L+VLDDV+   QL+ L+ G+ D FG GS
Sbjct: 260 LFSKILEEKNLDTRTPNLGNTFLKDRLSRKKILVVLDDVDSTMQLQELLPGQHDLFGPGS 319

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+VT+RDK+VL+    E   IY+V GL   EA + F   AFK+N    D    S  V  
Sbjct: 320 RIIVTSRDKQVLKNVVDE---IYKVEGLNQHEALQLFSLNAFKKNSPTNDRVEISTRVAD 376

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y KGNPL L VLG +L  K K  W   L  L  +   EI  +   L+ S++ L    ++I
Sbjct: 377 YAKGNPLALRVLGCALFDKSKEDWESALEKLRNVPNGEIQKV---LRFSYDGLDREERNI 433

Query: 238 FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FLDIACFF GED+++   ILD   S V   +  LIDKSLVS+  + L MHD+LQE G  I
Sbjct: 434 FLDIACFFRGEDRNYATKILDGCYSSVGFIISTLIDKSLVSVYRSKLEMHDLLQETGWSI 493

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VR+E E E  KRSRLW+PK++  VL   KGT AIEGI LDLS  + ++L+  AF  M +L
Sbjct: 494 VREEPELE--KRSRLWNPKDVYYVLTKKKGTKAIEGISLDLSTTREMHLECDAFAGMDHL 551

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPN-GLDYLPKKLRYLHWDTYPLRTLPSN 413
           R+ KFY             S        K+ LP  GL  L  +LRYL W  +P R+LP  
Sbjct: 552 RILKFYT------------SNSSIGCKHKMHLPGCGLQSLSDELRYLQWHKFPSRSLPPK 599

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           F  +NLV L+L  S +EQ W+G                 +  + C+ L S PS +H +  
Sbjct: 600 FCAENLVVLDLPHSNIEQLWKG-----------------VQLEYCKKLVSLPSCMHKLSQ 642

Query: 474 V-TINFSYCVNLIEFPQI--SGKVTRLYLGQSAIEEVPSSIE------CLTDLEVLDLRG 524
           + +I  SYC +L E P++  S KV   Y  +S +E   SS +      C T+   LD + 
Sbjct: 643 LRSIYLSYCKSLRELPELPKSLKVLEAYDCRS-MENFSSSSKCNFKNLCFTNCFKLDQKA 701

Query: 525 CKRLKRISTSFCKL 538
           C  +   + S  +L
Sbjct: 702 CSEINANAESTVQL 715



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 73/293 (24%)

Query: 760  RSLPELPLCLQYLN------LEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQE 813
            + L  LP C+  L+      L  C  LR LPELP  L++L   +C  +++      C   
Sbjct: 628  KKLVSLPSCMHKLSQLRSIYLSYCKSLRELPELPKSLKVLEAYDCRSMENFSSSSKC--- 684

Query: 814  LDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIA 873
                                 + K+  +CF  TNC KL+ KA ++I A+        A +
Sbjct: 685  ---------------------NFKN--LCF--TNCFKLDQKACSEINAN--------AES 711

Query: 874  SLRLGYEMAINEKLSELRGSL-IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFA 932
            +++L     +  K  E +  + I+  GSEIP+ F++Q  G S+ +QLP  S+     G A
Sbjct: 712  TVQL-----LTTKYRECQDQVRILFQGSEIPECFNDQKVGFSVSMQLP--SNWHQFEGIA 764

Query: 933  FCAVLDSKKVDSDC-FRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIED--LIDSDRVIL 989
            FC V  S+    DC    F    QF   +   +E + +   +   +I+D  L +SD+V+L
Sbjct: 765  FCIVFASEDPSIDCRISRFRCEGQFKTNV---NEQEDITCNWEC-FIDDLHLHESDQVLL 820

Query: 990  GFKPCLNVGFPDG-----------YHHTIATFKFFAER-----KFYKIKRCGL 1026
             + P +      G             ++ A+F+F+ +R     K  K+K+CG+
Sbjct: 821  WYDPFIIKALQGGGGGASQEEDLFNKYSTASFQFYPQRWKKLQKHCKVKKCGV 873



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 695 SLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC-LESLDL 753
           SLP+ + ++SQLR I+L     L+ LPELP  LK L   DC+ +++      C  ++L  
Sbjct: 632 SLPSCMHKLSQLRSIYLSYCKSLRELPELPKSLKVLEAYDCRSMENFSSSSKCNFKNLCF 691

Query: 754 TGC 756
           T C
Sbjct: 692 TNC 694


>gi|317415954|emb|CAR94519.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 1625

 Score =  336 bits (862), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 240/686 (34%), Positives = 350/686 (51%), Gaps = 82/686 (11%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           K+T+AKA+  +   +F+   F+S V G      GL H++KQ+    L +K  V   ++  
Sbjct: 235 KSTVAKALSQRIRSQFDAISFISKV-GQISKKKGLFHIKKQLCDHLLDKK--VTTKDVDD 291

Query: 80  FTKERVRRMKLLIVLDDVNEVGQLKRLIGE-----LDQFGQGSRIVVTTRDKRVLEKFRG 134
              +R+R  ++LI+LD+V+E+ Q+K + G       ++FG+GSRI+VTT D+R+L  +  
Sbjct: 292 VICKRLRDKRVLIILDNVDELEQIKAVAGNDSAGLSNRFGKGSRIIVTTTDERLLIYYNH 351

Query: 135 EEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLC 194
            E  IY++  L  ++A   FC  A K +H  +     S   V Y  G+PL LEV G SL 
Sbjct: 352 RE--IYKIEKLTPDQALLLFCRKALKTDHPTDAFKKLSNEFVDYIDGHPLALEVFGRSLR 409

Query: 195 LKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL-TPRVKSIFLDIACFFEGEDKDFV 253
            +++ +W   L  L     S    I  +LK SF+ L     K +FLD ACFF+G+D   +
Sbjct: 410 DRKEDYWSTKLKSLKDNNYSGEEKIIGVLKASFDGLENQEQKDMFLDTACFFKGKDVCRL 469

Query: 254 ASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLW 310
             I +         +DIL +K L+S+ G  L MHD+LQ+MGR IVR ES+KE G+RSRLW
Sbjct: 470 GKIFESCGYHPGINIDILCEKYLISMVGGKLWMHDLLQKMGRDIVRGESKKE-GERSRLW 528

Query: 311 DPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
                  VLK NKGT  +EGIFL  S+   ++L    F+NM NLRL K Y          
Sbjct: 529 HHTVALPVLKKNKGTKTVEGIFLSSSQPDKVHLKKDPFSNMDNLRLLKIY---------- 578

Query: 371 PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNL------ 424
                        V+    L+YL  +L  L W   PL++LPS+F+P  LVELNL      
Sbjct: 579 ------------NVEFSGCLEYLSDELSLLEWHKCPLKSLPSSFEPDKLVELNLSESEIE 626

Query: 425 -RCSKVEQPWEG---------EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
               ++E+P E          +K            L  L  +GC SL + P N++     
Sbjct: 627 ELWEEIERPLEKLAVLNLSDCQKLIKTPDFDKVPNLEQLILQGCTSLSAVPDNINLRSLT 686

Query: 475 TINFSYCVNLIEFPQIS---GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
               S C  L + P+I     ++ +L++  +AIEE+P+SI  L  L +L+LR CK L  +
Sbjct: 687 NFILSGCSKLKKLPEIGEDMKQLRKLHVDGTAIEELPTSINHLNGLTLLNLRDCKSLLSL 746

Query: 532 STSFC-KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE------- 583
               C  L SL  L + GC NL   PE L  +E L+ +Y+ RTPI  LP+S +       
Sbjct: 747 PDVICTSLTSLQILNVSGCSNLNELPENLGSLECLQELYASRTPIQVLPTSSKHLTDLTL 806

Query: 584 ------------------NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQL 625
                             NL  L++L +  CS L+ LP+N+GSLE L  + A+ +AISQ+
Sbjct: 807 LNLRECKNLLTLPDVICTNLTSLQILNLSGCSNLNELPENLGSLESLQELYASGTAISQV 866

Query: 626 PSSVALSNMLRSLDSSHCKGLESFPR 651
           P S++  + L  L    C  L+S PR
Sbjct: 867 PESISQLSQLEELVFDGCSKLQSLPR 892



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 189/444 (42%), Gaps = 72/444 (16%)

Query: 514  LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT 573
            L  L VL+L  C++L + +  F K+ +L  LIL GC +L   P+ +              
Sbjct: 636  LEKLAVLNLSDCQKLIK-TPDFDKVPNLEQLILQGCTSLSAVPDNI-------------- 680

Query: 574  PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSN 633
                      NL  L    +  CSKL  LP+    ++ L  +    +AI +LP+S+   N
Sbjct: 681  ----------NLRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHVDGTAIEELPTSINHLN 730

Query: 634  MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILYLSGNN 692
             L  L+   CK L S P      L+++ +L++S  + + E+P+ +  L  L+ LY S   
Sbjct: 731  GLTLLNLRDCKSLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSLECLQELYASRTP 790

Query: 693  FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC-----LKYLHLIDCKMLQSLPVLPFC 747
             + LP   K ++ L  ++L +   L +LP++ +C     L+ L+L  C  L  LP     
Sbjct: 791  IQVLPTSSKHLTDLTLLNLRECKNLLTLPDV-ICTNLTSLQILNLSGCSNLNELPENLGS 849

Query: 748  LESLD--LTGCNMLRSLPELPLCLQYLN---LEDCNMLRSLPELPLCLQLLTVRNCNRLQ 802
            LESL         +  +PE    L  L     + C+ L+SLP LP  ++ ++V NC  LQ
Sbjct: 850  LESLQELYASGTAISQVPESISQLSQLEELVFDGCSKLQSLPRLPFSIRAVSVHNCPLLQ 909

Query: 803  SLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILAD 862
                  + +                   W      SAA  F F     LN + ++ I   
Sbjct: 910  GADSNKITV-------------------WP-----SAAAGFSF-----LNRQRHDDIAQA 940

Query: 863  SLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPH 922
              L  +H+     +  +E AI        G       +EIP W S +S+ S+I I LP  
Sbjct: 941  FWLPDKHLLWPFYQTFFEGAIRRDERFEYG----YRSNEIPAWLSRRSTESTITIPLPHD 996

Query: 923  SSCRN-LIGFAFCAVLD-SKKVDS 944
               +   I  A C + + ++K DS
Sbjct: 997  VDGKTKWIKLALCFICEAAQKHDS 1020


>gi|154424272|gb|ABS82021.1| TAO1 [Arabidopsis thaliana]
          Length = 1140

 Score =  336 bits (861), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 286/938 (30%), Positives = 459/938 (48%), Gaps = 147/938 (15%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVR------GNSETAGGLEHLQ 58
            + V+++GIWG  GIGKTT+++ ++++  H+F+    + +++       + E +  L+ LQ
Sbjct: 232  EEVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRPCHDEYSAKLQ-LQ 290

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            K++LS  +++K  V    +PH    +ER++  K+L+VLDDV+ + QL  +  ++  FG G
Sbjct: 291  KELLSQMINQKDMV----VPHLGVAQERLKDKKVLLVLDDVDGLVQLDAMAKDVQWFGLG 346

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SRI+V T+D ++L K  G  K IY+V+    +EA E FC +AF E          +R+V 
Sbjct: 347  SRIIVVTQDLKLL-KAHGI-KYIYKVDFPTSDEALEIFCMYAFGEKSPKVGFEQIARTVT 404

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            +     PL L V+GS L    K  W K    + R+  S   DI  +LK S+N L  + K 
Sbjct: 405  TLAGKLPLGLRVMGSYLRRMSKQEWAK---SIPRLRTSLDDDIESVLKFSYNSLAEQEKD 461

Query: 237  IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQ 293
            +FL I CFF  E  + +   L     DV   L IL DKSL+S++   + MH++L ++G  
Sbjct: 462  LFLHITCFFRRERIETLEVFLAKKSVDVRQGLQILADKSLLSLNLGNIEMHNLLVQLGLD 521

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK-IKG-INLDPRAFTNM 351
            IVR++S  +PGKR  L D ++I  VL  + GT  + GI L+LS  I+G IN+  RAF  M
Sbjct: 522  IVRKQSIHKPGKRQFLVDTEDICEVLTDDTGTRTLIGIDLELSGVIEGVINISERAFERM 581

Query: 352  SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
             NL+  +F+ P       +             + LP GL ++ +KLR LHW+ YPL  LP
Sbjct: 582  CNLQFLRFHHPYGDRCHDI-------------LYLPQGLSHISRKLRLLHWERYPLTCLP 628

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
              F P+ LV++N+R S +E+ W+G +      I+N K++  LSF  C +L+  P      
Sbjct: 629  PKFNPEFLVKINMRDSMLEKLWDGNEP-----IRNLKWMD-LSF--CVNLKELPDFSTAT 680

Query: 472  CPVTINFSYCVNLIEFPQISGKVTRL----YLGQSAIEEVPSSIECLTDLEVLDLRGCKR 527
                +    C++L+E P   G VT L     +  S++ ++PSSI  LT+L+ L L  C  
Sbjct: 681  NLQELRLINCLSLVELPSSIGNVTNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSS 740

Query: 528  LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
            L ++ +SF  + SL  L L GC                       + + E+PSS  N+  
Sbjct: 741  LVKLPSSFGNVTSLKELNLSGC-----------------------SSLLEIPSSIGNIVN 777

Query: 588  LEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
            L+ L+ + CS L  LP +IG+   L  + L   S++ + PSS+     L  L+ S C  L
Sbjct: 778  LKKLYADGCSSLVQLPSSIGNNTNLKELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSL 837

Query: 647  ESFPRTFLLGLSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMS 704
               P   +  +  +  L++SD  ++ E+P  I   ++L+ LYL G +N   LP+ I  ++
Sbjct: 838  VKLPS--IGNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGCSNLLELPSSIWNIT 895

Query: 705  QLRFIHLEDFNMLQSLPEL---PLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRS 761
             L+ ++L   + L+ LP L    + L+ L L+ C  L  LP   + + +L     +   S
Sbjct: 896  NLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIWRISNLSYLDVSNCSS 955

Query: 762  LPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEK 821
            L EL L              S P +P  L +L   +C  L         +Q LD      
Sbjct: 956  LVELNLV-------------SHPVVPDSL-ILDAGDCESL---------VQRLDC----- 987

Query: 822  LSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEM 881
                           ++  I   F NC KLN +A + I+  S  R               
Sbjct: 988  -------------FFQNPKIVLNFANCFKLNQEARDLIIQTSACRN-------------- 1020

Query: 882  AINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
                          +LPG ++P +F+ +++G S+ ++L
Sbjct: 1021 -------------AILPGEKVPAYFTYRATGDSLTVKL 1045


>gi|356506534|ref|XP_003522035.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1035

 Score =  336 bits (861), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 235/660 (35%), Positives = 341/660 (51%), Gaps = 91/660 (13%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V+++GIWGM GIGKTT+ + +F++   E+E  CF++ V    E  G +  ++++++S
Sbjct: 201 SKDVRVIGIWGMHGIGKTTIVEELFNKQCFEYESCCFLAKVNEELERHGVI-CVKEKLIS 259

Query: 64  TTLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
           T L+E +++   N +P+    R+ RMK+ IVLDDVN+  Q+++L+G LD  G GSRI++T
Sbjct: 260 TLLTEDVKINTTNGLPNDILRRIGRMKIFIVLDDVNDYDQVEKLVGTLDWLGSGSRIIIT 319

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH----SRSVVSY 178
            RD+++L     +   IY +  L  +EA E FC  AF ++H  ++  W     S  +V Y
Sbjct: 320 ARDRQIL---HNKVDDIYEIGSLSIDEAGELFCLNAFNQSHLGKEY-WDYLLLSYWMVDY 375

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
            KG PLVL+VLG  L  K K  W   L  L ++   ++HDI   +K S+  L  + K+IF
Sbjct: 376 AKGVPLVLKVLGQLLRGKDKEVWKSQLDKLQKMPNKKVHDI---MKPSYYDLDRKEKNIF 432

Query: 239 LDIACFFEGED--KDFVASILDDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEM 290
           LDIACFF G +   D++  +L D E+D      L+ L DKSL++IS  N ++MH+I+QEM
Sbjct: 433 LDIACFFNGLNLKVDYLNLLLRDHENDNSVAIGLERLKDKSLITISEDNTVSMHNIVQEM 492

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
           GR+I  +ES ++ G RSRL D  EI  VL +NKGT AI  I +DLSKI+ + L PR F+ 
Sbjct: 493 GREIAHEESSEDLGSRSRLSDADEIYEVLNNNKGTSAIRSISIDLSKIRKLKLGPRIFSK 552

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           MSNL+   F+                + + +    LP GL+YLP  +RYL W   PLR+L
Sbjct: 553 MSNLQFLDFH-----------GKYNRDDMDF----LPEGLEYLPSNIRYLRWKQCPLRSL 597

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
           P  F  K+LV L+L  S V++ W+G        +QN   L  +    CQ +   P     
Sbjct: 598 PEKFSAKDLVILDLSDSCVQKLWDG--------MQNLVNLKEVRLYRCQFMEELPDFTKA 649

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                +N S+C                      +  V SSI  L  LE L++  C  L R
Sbjct: 650 TNLEVLNLSHC---------------------GLSSVHSSIFSLKKLEKLEITYCFNLTR 688

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
           +++    L SL  L L  C  L+      E M  L    S    +  LPSSF     LE+
Sbjct: 689 LTSDHIHLSSLRYLNLELCHGLKELSVTSENMIELNMRGSFGLKV--LPSSFGRQSKLEI 746

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           L +                   Y+     S I  LPSS+     LR LD  HC  L++ P
Sbjct: 747 LVI-------------------YF-----STIQSLPSSIKDCTRLRCLDLRHCDFLQTIP 782



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 139/303 (45%), Gaps = 22/303 (7%)

Query: 456 KGCQSLRSFPSNLHFVCPVTIN---FSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIE 512
           KG  ++RS   +L  +  + +    FS   NL +F    GK  R       ++ +P  +E
Sbjct: 525 KGTSAIRSISIDLSKIRKLKLGPRIFSKMSNL-QFLDFHGKYNR-----DDMDFLPEGLE 578

Query: 513 CL-TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSD 571
            L +++  L  + C  L+ +   F   + LV L L     ++   + ++ + +LK +   
Sbjct: 579 YLPSNIRYLRWKQCP-LRSLPEKFSA-KDLVILDLSDSC-VQKLWDGMQNLVNLKEVRLY 635

Query: 572 RTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVA 630
           R    E    F     LEVL +  C  L ++  +I SL+ L  + +     +++L S   
Sbjct: 636 RCQFMEELPDFTKATNLEVLNLSHCG-LSSVHSSIFSLKKLEKLEITYCFNLTRLTSDHI 694

Query: 631 LSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYL 688
             + LR L+   C GL+    T   ++ L+  G      + ++ +P      S LEIL +
Sbjct: 695 HLSSLRYLNLELCHGLKELSVTSENMIELNMRG-----SFGLKVLPSSFGRQSKLEILVI 749

Query: 689 SGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCL 748
             +  +SLP+ IK  ++LR + L   + LQ++PELP  L+ L   +C+ L+++      +
Sbjct: 750 YFSTIQSLPSSIKDCTRLRCLDLRHCDFLQTIPELPPSLETLLANECRYLRTVLFPSTAV 809

Query: 749 ESL 751
           E L
Sbjct: 810 EQL 812



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 183/454 (40%), Gaps = 78/454 (17%)

Query: 523 RGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI----YSDRTPITEL 578
           +G   ++ IS    K+R L     LG       P I  KM +L+ +      +R  +  L
Sbjct: 525 KGTSAIRSISIDLSKIRKLK----LG-------PRIFSKMSNLQFLDFHGKYNRDDMDFL 573

Query: 579 PSSFENLP-GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
           P   E LP  +  L  + C  L +LP+   + + L  +  + S + +L   +     L+ 
Sbjct: 574 PEGLEYLPSNIRYLRWKQCP-LRSLPEKFSAKD-LVILDLSDSCVQKLWDGMQNLVNLKE 631

Query: 638 LDSSHCKGLESFPR-TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL 696
           +    C+ +E  P  T    L  + L H    +V      +  L  LEI Y    N   L
Sbjct: 632 VRLYRCQFMEELPDFTKATNLEVLNLSHCGLSSVHSSIFSLKKLEKLEITYCF--NLTRL 689

Query: 697 PAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP--FCLES---L 751
            +    +S LR+++LE   +   L EL +  + +  ++ +    L VLP  F  +S   +
Sbjct: 690 TSDHIHLSSLRYLNLE---LCHGLKELSVTSENMIELNMRGSFGLKVLPSSFGRQSKLEI 746

Query: 752 DLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCL 811
            +   + ++SLP         +++DC  LR       CL L   R+C+ LQ++PE+   L
Sbjct: 747 LVIYFSTIQSLPS--------SIKDCTRLR-------CLDL---RHCDFLQTIPELPPSL 788

Query: 812 QELDASVLEKL-SKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHM 870
           + L A+    L +   P    A E LK      EF NCL L+  +   I  +  + +   
Sbjct: 789 ETLLANECRYLRTVLFPST--AVEQLKENRKKIEFWNCLCLDKHSLTAIELNVQINVMKF 846

Query: 871 A-------------------IASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSS 911
           A                   I  L+ GYE   + + +         PGS  P W   +++
Sbjct: 847 ACQHFPAPELDFDDYNDYVVIHDLQSGYEECDSYQAT------YAYPGSTFPKWLEYKTT 900

Query: 912 GSSICIQLPPHSSCRNLIGFAFCAVL--DSKKVD 943
              + I L        L GF FC ++  DSK+ D
Sbjct: 901 NDYVVIDLSSGQLSHQL-GFIFCFIVPKDSKRDD 933


>gi|357507435|ref|XP_003624006.1| TMV resistance protein N [Medicago truncatula]
 gi|87162908|gb|ABD28703.1| TIR [Medicago truncatula]
 gi|355499021|gb|AES80224.1| TMV resistance protein N [Medicago truncatula]
          Length = 1134

 Score =  335 bits (860), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 272/789 (34%), Positives = 387/789 (49%), Gaps = 117/789 (14%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS-TTLSEKLEVAGPNIP 78
           K+T+A+A+++    EFE +CF+ +VR  SET  GL HLQ+Q+LS  ++S        +  
Sbjct: 229 KSTIARAVYETIRCEFELTCFLENVREISET-NGLVHLQRQLLSHLSISRNDFHDLYDGK 287

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              +  + R K+L+VLDDVNE+ QL+ L+G+ D FG GSR+++TTRDK +L        K
Sbjct: 288 KTIQNSLCRKKVLLVLDDVNELNQLENLVGKQDWFGPGSRVIITTRDKHLL--MTHGVHK 345

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            Y+   L   +A   FC  AFK +   E     S+ VV Y  G PL LEVLGS L  +  
Sbjct: 346 TYKTGMLCKHDALVLFCLKAFKGDKPQEGYLDLSKEVVDYCGGLPLALEVLGSYLYGRNI 405

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             W   +  L       + D    LKIS++ L    K IFLDIACFF+G   D V  IL+
Sbjct: 406 DVWHSAVKKLRSFPHPRVQDN---LKISYDSLDTMEKDIFLDIACFFKGMKGDKVIDILE 462

Query: 259 DS---ESDVLDILIDKSLVSISG--NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
                    + ILI++SL+++    N L MHD+LQEMGR IV QES  +P +RSRLW  +
Sbjct: 463 SCGYFPQIGIQILIERSLITLDSVNNKLGMHDLLQEMGRDIVFQESPNDPCRRSRLWSQE 522

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           +I RVL  NKGT+AI  I + L +    + +  AF+  S L+                  
Sbjct: 523 DIDRVLTKNKGTEAINSIDMKLLQPYEAHWNTEAFSKTSQLKF----------------- 565

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
                LS  ++QLP GL  LP  L+ LHW   PL+TLP   +   LV++ L  SK+EQ W
Sbjct: 566 -----LSLCEMQLPLGLSCLPSSLKVLHWRGCPLKTLPITTQLDELVDITLSHSKIEQLW 620

Query: 434 EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG- 492
           +G K      ++  KYL                          N ++  NL   P  SG 
Sbjct: 621 QGVKF-----MEKMKYL--------------------------NLAFSKNLKRLPDFSGV 649

Query: 493 -KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
             + +L L G   + EV  S+     + +++L+ CK LK +S    ++ SL  LIL G  
Sbjct: 650 PNLEKLILEGCEGLIEVHPSLAHHKKVVLVNLKDCKSLKSLSGKL-EMSSLKKLILSGSS 708

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED--------------- 595
             +  PE  EKME+L  +  + T I +LP S   L GL  L ++D               
Sbjct: 709 KFKFLPEFGEKMENLSMLALEGTDIRKLPLSLGRLVGLTNLNLKDCKSLVCLPDTIHGLN 768

Query: 596 ---------CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKG- 645
                    CSKL  LPD +  ++ L  + A  +AI +LPSS+   + L+ L  + C+G 
Sbjct: 769 SLITLDISGCSKLCRLPDGLKEIKCLEELHANDTAIDELPSSIFYLDSLKVLSFAGCQGP 828

Query: 646 --------------LESFPRT--FLLGLSAMGL-------LHISDYAVREIPQEIAYLSS 682
                           S P +  F L  S MGL       L   + +    P    +LSS
Sbjct: 829 STTSMNWFLPFNLMFGSQPASNGFRLPSSVMGLPSLEYLNLSYCNLSEESFPNYFHHLSS 888

Query: 683 LEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
           L+ L L+GNNF  +P+ I ++S+LRF+ L     LQ LPELPL +  L+  +C  L ++ 
Sbjct: 889 LKSLDLTGNNFVIIPSSISKLSRLRFLCLNWCQKLQLLPELPLTMTQLNASNCDSLDTMK 948

Query: 743 VLPFCLESL 751
             P  L SL
Sbjct: 949 FNPAKLCSL 957


>gi|224108373|ref|XP_002333401.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222836441|gb|EEE74848.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1279

 Score =  335 bits (859), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 265/756 (35%), Positives = 396/756 (52%), Gaps = 94/756 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
           KTT+A+ ++D+F  +FEGSCF+++VR       G   LQ+Q+LS  L E+  V   +   
Sbjct: 239 KTTVARVVYDRFRLQFEGSCFLANVREVFAEKDGPCRLQEQLLSEILMERASVWDSSRGI 298

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+RDK+VL   R    +
Sbjct: 299 EMIKRRLRLKKILLILDDVDDKEQLEFLAEERGWFGPGSRIIITSRDKQVLT--RNGVAR 356

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV+GS L  +  
Sbjct: 357 IYEGEKLNDDDALMLFSQKAFKNDQPAEDFLDLSKQVVGYASGLPLALEVIGSFLHGRSI 416

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             W   ++ +N I + EI     +L +SF+ L    K IFLDIACF +G   D +  ILD
Sbjct: 417 PEWRGAINRMNEIPDREI---IKVLLVSFDGLHELEKKIFLDIACFLKGFKIDRITRILD 473

Query: 259 DS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                 S  + +LI++SL+S+S + + MH++LQ+MG++I+R+ES +EPG+RSRLW  K++
Sbjct: 474 GRGFHASIGIPVLIERSLISVSRDQVWMHNLLQKMGKEIIRRESPEEPGRRSRLWTYKDV 533

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
              L  N G + +E IFLD+  IK    + +AF+ MS LRL K                 
Sbjct: 534 CLALMDNTGKEKVEAIFLDMPGIKEARWNMKAFSKMSRLRLLKI---------------- 577

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
                   VQL  G + L   LR+L W +YP ++LP+  +   LVEL++  S +EQ W G
Sbjct: 578 ------DNVQLFEGPEDLSNNLRFLEWHSYPSKSLPAGLQVDELVELHMANSNLEQLWYG 631

Query: 436 EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG--K 493
            K+ V     N K                           IN S  +NL + P ++G   
Sbjct: 632 CKSAV-----NLK--------------------------IINLSNSLNLSQTPDLTGIPN 660

Query: 494 VTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
           +  L L G +++ EV  S+     L+ ++L  CK + RI  +  ++ SL    L GC  L
Sbjct: 661 LKSLILEGCTSLSEVHPSLAHHKKLQHVNLVNCKSI-RILPNNLEMESLEVCTLDGCSKL 719

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC---------------- 596
           E FP+I   M  L  +  D T IT+L SS   L GL +L + +C                
Sbjct: 720 EKFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCLKSL 779

Query: 597 --------SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
                   S+L  +P+N+G +E L     + ++I QLP+SV L   L+ L    CK +  
Sbjct: 780 KKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQLPASVFLLKKLKVLSLDGCKRIVV 839

Query: 649 FPRTFLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
            P   L GL ++ +L +    +RE  +P++I +LSSL  L LS NNF SLP  I ++S+L
Sbjct: 840 LPS--LSGLCSLEVLGLRSCNLREGALPEDIGWLSSLRSLDLSQNNFVSLPKSINRLSEL 897

Query: 707 RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
             + LED  ML+SLPE+P  ++ ++L  C  L+++P
Sbjct: 898 EMLVLEDCTMLESLPEVPSKVQTVYLNGCISLKTIP 933


>gi|297741888|emb|CBI33323.3| unnamed protein product [Vitis vinifera]
          Length = 1186

 Score =  335 bits (858), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 218/596 (36%), Positives = 333/596 (55%), Gaps = 34/596 (5%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK---LEVAGPN 76
           KTT+AKAI+++ SH+++GS F+ +++  S+  G +  LQ+++L   L  K   +      
Sbjct: 66  KTTIAKAIYNEISHQYDGSSFLINIKERSK--GDILQLQQELLHGILRGKNFKINNVDEG 123

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           I    K  +   ++L++ DDV+E+ QL+ L  E D F   S I++T+RDK VL ++  + 
Sbjct: 124 IS-MIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDWFRAKSTIIITSRDKHVLAQYGADI 182

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
           +  Y V+ L  EEA E F  +AFK+N   E     S +++ Y  G PL L+VLG+SL  K
Sbjct: 183 R--YEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYNIIDYANGLPLALKVLGASLFGK 240

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
           + S+W   L  L  +   EIH++   L+ISF+ L    K IFLD+ACFF+G+D+DFV+ I
Sbjct: 241 KISNWESALCKLKIMPHMEIHNV---LRISFDGLDDIDKGIFLDVACFFKGDDRDFVSRI 297

Query: 257 LDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
           L       +  L D+ L+++S N L+MHD++Q+MG +I+RQE  ++PG+RSRL D     
Sbjct: 298 LGPHAKHAITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQECPEDPGRRSRLCDSNAY- 356

Query: 317 RVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTE 376
            VL  NKGT AIEG+FLD  K     L   +F  M+ LRL K + P+     KL      
Sbjct: 357 HVLTGNKGTRAIEGLFLDRCKFNPSELTTESFKEMNRLRLLKIHNPR----RKL------ 406

Query: 377 EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE 436
               + K  LP   ++   +L YLHWD YPL +LP NF  KNLVEL+LR S ++Q W G 
Sbjct: 407 ----FLKDHLPRDFEFYSYELAYLHWDGYPLESLPMNFHAKNLVELSLRDSNIKQVWRGN 462

Query: 437 KACVPSSIQNFKY---LSALSFKGCQSLRSFPSNLH-FVCPVTINFSYCVNLIEFPQISG 492
           K  +     NF     L  L+ +GC +L   P  ++ +    T++ + C  L  FP+I G
Sbjct: 463 KVLLLLFSYNFSSVPNLEILTLEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKG 522

Query: 493 KVTRLY---LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
            +  L    L  +AI ++PSSI  L  L+ L L+ C +L +I    C L SL  L L  C
Sbjct: 523 DMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHC 582

Query: 550 LNLE-HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
             +E   P  +  +  L+++  ++   + +P++   L  LEVL +  C+ L+ +P+
Sbjct: 583 NIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNLEQIPE 638



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 131/241 (54%), Gaps = 3/241 (1%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S + EVP  IE   +L+ L LR C+ L  + +S    +SL TL   GC  LE FPEIL+ 
Sbjct: 921  SDMNEVPI-IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQD 979

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL-EYLYYILAAAS 620
            ME L+++Y + T I E+PSS + L GL+ L + +C  L NLP++I +L  +   +++   
Sbjct: 980  MESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCP 1039

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
              ++LP ++     L  L   H   + +F    L GL ++  L +    +RE P EI YL
Sbjct: 1040 NFNKLPDNLGRLQSLEYLFVGHLDSM-NFQLPSLSGLCSLRTLKLQGCNLREFPSEIYYL 1098

Query: 681  SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
            SSL  L L GN+F  +P  I Q+  L  ++L    MLQ +PELP  L  L    C  L++
Sbjct: 1099 SSLVTLSLGGNHFSRIPDGISQLYNLENLYLGHCKMLQHIPELPSGLFCLDAHHCTSLEN 1158

Query: 741  L 741
            L
Sbjct: 1159 L 1159



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 141/325 (43%), Gaps = 63/325 (19%)

Query: 411 PSNFKPKNLVELN-LRCSKVEQPWEGE--KACVPSSIQNFKY-LSALSFKGCQSLRSFPS 466
           PS    ++  E+N LR  K+  P      K  +P   + + Y L+ L + G   L S P 
Sbjct: 380 PSELTTESFKEMNRLRLLKIHNPRRKLFLKDHLPRDFEFYSYELAYLHWDG-YPLESLPM 438

Query: 467 NLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPS-SIECLTDLEVLDLRGC 525
           N H             NL+E       + +++ G   +  + S +   + +LE+L L GC
Sbjct: 439 NFH-----------AKNLVELSLRDSNIKQVWRGNKVLLLLFSYNFSSVPNLEILTLEGC 487

Query: 526 KRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL 585
             L+ +     K + L TL   GC  LE FPEI   M  L+ +    T I +LPSS  +L
Sbjct: 488 VNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLPSSITHL 547

Query: 586 PGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKG 645
            GL+ L +++C KL  +P++I  L                       + L+ LD  HC  
Sbjct: 548 NGLQTLLLQECLKLHQIPNHICHL-----------------------SSLKELDLGHCNI 584

Query: 646 LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQ 705
           +E                         IP +I +LSSL+ L L   +F S+P  I Q+S+
Sbjct: 585 MEG-----------------------GIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSR 621

Query: 706 LRFIHLEDFNMLQSLPELPLCLKYL 730
           L  ++L   N L+ +PELP  L+ L
Sbjct: 622 LEVLNLSHCNNLEQIPELPSRLRLL 646



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 33/233 (14%)

Query: 429  VEQPWEGEKACV---------PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
            +E P E +  C+         PSSI  FK L+ LS  GC  L SFP              
Sbjct: 929  IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFP-------------- 974

Query: 480  YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
                  E  Q    + +LYL  +AI+E+PSSI+ L  L+ L LR CK L  +  S C L 
Sbjct: 975  ------EILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLT 1028

Query: 540  SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPIT--ELPSSFENLPGLEVLFVEDCS 597
            S  TL++  C N    P+ L +++ L+ ++         +LP S   L  L  L ++ C+
Sbjct: 1029 SFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLP-SLSGLCSLRTLKLQGCN 1087

Query: 598  KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
             L   P  I  L  L  +    +  S++P  ++    L +L   HCK L+  P
Sbjct: 1088 -LREFPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLENLYLGHCKMLQHIP 1139



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 38/241 (15%)

Query: 575  ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
            +T LPSS      L  L    CS+L++ P+ +  +E L  +    +AI ++PSS+     
Sbjct: 946  LTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRG 1005

Query: 635  LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNF 693
            L+ L   +CK L +                        +P+ I  L+S + L +S   NF
Sbjct: 1006 LQYLLLRNCKNLVN------------------------LPESICNLTSFKTLVVSRCPNF 1041

Query: 694  ESLPAIIKQMSQLRFI---HLEDFNMLQSLPELP-LC-LKYLHLIDCKMLQSLPVLPFCL 748
              LP  + ++  L ++   HL+  N    LP L  LC L+ L L  C  L+  P   + L
Sbjct: 1042 NKLPDNLGRLQSLEYLFVGHLDSMNF--QLPSLSGLCSLRTLKLQGCN-LREFPSEIYYL 1098

Query: 749  ESLDLT--GCNMLRSLPE---LPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQS 803
             SL     G N    +P+       L+ L L  C ML+ +PELP  L  L   +C  L++
Sbjct: 1099 SSLVTLSLGGNHFSRIPDGISQLYNLENLYLGHCKMLQHIPELPSGLFCLDAHHCTSLEN 1158

Query: 804  L 804
            L
Sbjct: 1159 L 1159



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 146/403 (36%), Gaps = 111/403 (27%)

Query: 581 SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS 640
           +F ++P LE+L +E C  L+ LP  I   ++L                       ++L  
Sbjct: 472 NFSSVPNLEILTLEGCVNLELLPRGIYKWKHL-----------------------QTLSC 508

Query: 641 SHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN-NFESLPAI 699
           + C  LE FP      +  + +L +S  A+ ++P  I +L+ L+ L L        +P  
Sbjct: 509 NGCSKLERFPE-IKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNH 567

Query: 700 IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNML 759
           I  +S L+ + L   N+++      +C    HL     LQ L +      S+  T   + 
Sbjct: 568 ICHLSSLKELDLGHCNIMEGGIPSDIC----HL---SSLQKLNLEQGHFSSIPTTINQLS 620

Query: 760 RSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVL 819
           R        L+ LNL  CN L  +PELP  L+LL     NR  S    L           
Sbjct: 621 R--------LEVLNLSHCNNLEQIPELPSRLRLLDAHGSNRTSSRALFL----------- 661

Query: 820 EKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGY 879
                           L S   CF +   LK          +DS  R             
Sbjct: 662 ---------------PLHSLVNCFSWAQGLKRTS------FSDSSYRG------------ 688

Query: 880 EMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLPPHSSCRN-LIGFAFCAVL 937
                      +G+ IVLP ++ IP+W  +++       +LP +    N  +GFA C V 
Sbjct: 689 -----------KGTCIVLPRTDGIPEWIMDRTKRYFTETELPQNWHQNNEFLGFALCCV- 736

Query: 938 DSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIED 980
                        YV F ++ E     E+ H     ++   ED
Sbjct: 737 -------------YVPFAYESEDIPEKESAHGSKNESANKSED 766



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 58/131 (44%), Gaps = 28/131 (21%)

Query: 722  ELPLCLKYLHLIDCKMLQSLPVLPF---CLESLDLTGCNMLRSLPELPLCLQYLNLEDCN 778
            E PL L  L L DC+ L SLP   F    L +L  +GC+ L S PE+        L+D  
Sbjct: 930  ENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEI--------LQDME 981

Query: 779  MLRSL-------PELPLC------LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKH 825
             LR L        E+P        LQ L +RNC  L +LPE +  L      V+ +    
Sbjct: 982  SLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSR---- 1037

Query: 826  SPDLQWAPESL 836
             P+    P++L
Sbjct: 1038 CPNFNKLPDNL 1048


>gi|224114331|ref|XP_002332400.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832723|gb|EEE71200.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1119

 Score =  335 bits (858), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 264/760 (34%), Positives = 391/760 (51%), Gaps = 96/760 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
           KTT+A+ ++D+   +FEGSCF+++VR       G   LQ+Q+LS  L E+  V   +   
Sbjct: 70  KTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGRRRLQEQLLSEILMERASVWDSSRGI 129

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+RDK+V+        +
Sbjct: 130 EMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPGSRIIITSRDKKVVTG--NNNNR 187

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY    L  ++A   F   AFK +H  ED    S+ VV Y  G PL LEV+GS L  +  
Sbjct: 188 IYEAKKLNDDDALMLFSQKAFKNDHPTEDFVELSKQVVGYANGLPLALEVIGSFLYDRSI 247

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             W   ++ +N I +  I    D+L++SF+ L    K IFLDIACF +G   D +  IL 
Sbjct: 248 PEWRGAINRMNEIPDGRI---IDVLRVSFDGLHESDKKIFLDIACFLKGFKIDRITRILQ 304

Query: 259 DSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                    + +LI++SL+S+S + + MH++LQ MG++IVR ES +EPG+RSRLW  +++
Sbjct: 305 SRGFHAGIGIPVLIERSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDV 364

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
              L  N G + IE IF D+  IK    + +AF+ MS LRL K                 
Sbjct: 365 CLALMDNTGKEKIEAIFFDMPGIKEAQWNMKAFSKMSRLRLLKI---------------- 408

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
                   VQL  G + L  KL +L W +YP ++LP+  +   LVEL++  S ++Q W G
Sbjct: 409 ------DNVQLSEGPENLSNKLLFLEWHSYPSKSLPAGLQVDELVELHMANSNLDQLWYG 462

Query: 436 EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG--K 493
            K             SA + K                   IN S  ++L + P  +G   
Sbjct: 463 CK-------------SAFNLK------------------VINLSNSLHLTKTPDFTGIPN 491

Query: 494 VTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
           +  L L G +++ EV  S+     L+ ++L  C+ + RI  S  ++ SL   IL GC  L
Sbjct: 492 LESLILEGCTSLSEVHPSLGYHKKLQYVNLMDCESV-RILPSNLEMESLKVCILDGCSKL 550

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE------------------ 594
           E FP+I+  M  L  +  D T I EL SS  +L GLEVL ++                  
Sbjct: 551 EKFPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPSSIGCLKSL 610

Query: 595 ------DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL-E 647
                  CS+ +N+P+N+G +E L     + ++I Q P+S+ L   L+ L    CK + E
Sbjct: 611 KKLDLFGCSEFENIPENLGKVESLEEFDVSGTSIRQPPASIFLLKNLKVLSFDGCKRIAE 670

Query: 648 SFPRTFLLGLSAMGLLHISDYA---VRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
           S     L  LS +  L + D     +RE  +P++I  LSSL+ L LS NNF SLP  I Q
Sbjct: 671 SLTDQRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNFVSLPRSINQ 730

Query: 703 MSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
           +S L  + LED  ML+SLPE+P  ++ L+L  C  L+ +P
Sbjct: 731 LSGLEMLALEDCTMLESLPEVPSKVQTLNLNGCIRLKEIP 770


>gi|154424270|gb|ABS82020.1| TAO1 [Arabidopsis thaliana]
          Length = 1140

 Score =  335 bits (858), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 286/938 (30%), Positives = 460/938 (49%), Gaps = 147/938 (15%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVR------GNSETAGGLEHLQ 58
            + V+++GIWG  GIGKTT+++ ++++  H+F+    + +++       + E +  L+ LQ
Sbjct: 232  EEVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRPCHDEYSAKLQ-LQ 290

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            K++LS  +++K  V    +PH    +ER++  K+L+VLDDV+ + QL  +  ++  FG G
Sbjct: 291  KELLSQMINQKDMV----VPHLGVAQERLKDKKVLLVLDDVDGLVQLDAMAKDVQWFGLG 346

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SRI+V T+D ++L K  G  K IY+V+    +EA E FC +AF E          +R+V 
Sbjct: 347  SRIIVVTQDLKLL-KAHGI-KYIYKVDFPTSDEALEIFCMYAFGEKSPKVGFEQIARTVT 404

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            +     PL L V+GS L    K  W K    + R+  S   DI  +LK S+N L  + K 
Sbjct: 405  TLAGKLPLGLRVMGSYLRRMSKQEWAK---SIPRLRTSLDDDIESVLKFSYNSLAEQEKD 461

Query: 237  IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQ 293
            +FL I CFF  E  + +   L     DV   L IL DKSL+S++   + MH++L ++G  
Sbjct: 462  LFLHITCFFRRERIETLEVFLAKKSVDVRQGLQILADKSLLSLNLGNIEMHNLLVQLGLD 521

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK-IKG-INLDPRAFTNM 351
            IVR++S  +PGKR  L D ++I  VL  + GT  + GI L+LS  I+G IN+  RAF  M
Sbjct: 522  IVRKQSIHKPGKRQFLVDTEDICEVLTDDTGTRTLIGIDLELSGVIEGVINISERAFERM 581

Query: 352  SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
             NL+  +F+ P       +             + LP GL ++ +KLR LHW+ YPL  LP
Sbjct: 582  CNLQFLRFHHPYGDRCHDI-------------LYLPQGLSHISRKLRLLHWERYPLTCLP 628

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
              F P+ LV++N+R S +E+ W+G +      I+N K++  LSF  C +L+  P      
Sbjct: 629  PKFNPEFLVKINMRDSMLEKLWDGNEP-----IRNLKWMD-LSF--CVNLKELPDFSTAT 680

Query: 472  CPVTINFSYCVNLIEFPQISGKVTRL----YLGQSAIEEVPSSIECLTDLEVLDLRGCKR 527
                +    C++L+E P   G  T L     +  S++ ++PSSI  LT+L+ L L  C  
Sbjct: 681  NLQELRLINCLSLVELPSSIGNATNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSS 740

Query: 528  LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR-TPITELPSSFENLP 586
            L ++ +SF  + SL  L L GC +L   P  +  + +LK++Y+D  + + +LPSS  N  
Sbjct: 741  LVKLPSSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNT 800

Query: 587  GLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKG 645
             L+ L + +CS L   P ++ +L  L  + L+   ++ +LPS   + N L+SL  S C  
Sbjct: 801  NLKELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPSIGNVIN-LQSLYLSDCSS 859

Query: 646  LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMS 704
            L                         E+P  I   ++L+ LYL G +N   LP+ I  ++
Sbjct: 860  L------------------------MELPFTIENATNLDTLYLDGCSNLLELPSSIWNIT 895

Query: 705  QLRFIHLEDFNMLQSLPEL---PLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRS 761
             L+ ++L   + L+ LP L    + L+ L L+ C  L  LP   + + +L     +   S
Sbjct: 896  NLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIWRISNLSYLDVSNCSS 955

Query: 762  LPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEK 821
            L EL L              S P +P  L +L   +C  L         +Q LD      
Sbjct: 956  LLELNLV-------------SHPVVPDSL-ILDAGDCESL---------VQRLDC----- 987

Query: 822  LSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEM 881
                           ++  I   F NC KLN +A + I+  S  R               
Sbjct: 988  -------------FFQNPKIVLNFANCFKLNQEARDLIIQTSACRN-------------- 1020

Query: 882  AINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
                          +LPG ++P +F+ +++G S+ ++L
Sbjct: 1021 -------------AILPGEKVPAYFTYRATGDSLTVKL 1045


>gi|357449987|ref|XP_003595270.1| Heat shock protein [Medicago truncatula]
 gi|355484318|gb|AES65521.1| Heat shock protein [Medicago truncatula]
          Length = 1819

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 229/627 (36%), Positives = 327/627 (52%), Gaps = 71/627 (11%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFD-QFSHEFEGSCFVSDVRGNSETAGGLEHLQK 59
           + S +   +VGI+G GG+GK+TLA+A+++ Q S +F+G CF+ D+R N+    GL  LQ+
Sbjct: 207 IGSDEGANMVGIYGTGGVGKSTLARAVYNNQISDQFDGVCFLDDIRENA-INHGLVQLQE 265

Query: 60  QMLSTTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            +LS  L EK ++   N+       K R++R K+L+VLDDV++  Q++ L G    FG G
Sbjct: 266 TLLSEILCEK-DIRVGNVSRGISIIKRRLQRKKVLLVLDDVDKAKQIQVLAGGHYWFGSG 324

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           S+I++TTRDK +L     E   +Y V  L  E++ E F   AF+        N  S   V
Sbjct: 325 SKIIITTRDKHLLAIH--EILNLYEVKQLNHEKSLELFNWHAFRNRKMDPCYNDISNRAV 382

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           SY  G PL LEV+GS L  KR   W   L    RI   +IH++   LK+S++ L    K 
Sbjct: 383 SYAHGLPLALEVIGSHLFGKRLDVWKSALDKYERILHEDIHEV---LKVSYDDLDKDDKG 439

Query: 237 IFLDIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGR 292
           IFLDIACF+   +  +   +L     S  + + +L DKSL+ I GN  + MHD++Q+MGR
Sbjct: 440 IFLDIACFYNSYEMGYAKEMLYVHGFSAENGIQVLTDKSLIKIDGNGCVRMHDLVQDMGR 499

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           +IVRQES  EPGKRSRLW   +I  VL+ N GTD +E I +DL   K +     AF NM 
Sbjct: 500 EIVRQESTLEPGKRSRLWSDDDIIHVLEENTGTDTVEVIIIDLYNDKEVQWSGTAFENMK 559

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NL++      +F                        G   LP  L  L W  Y  ++LP 
Sbjct: 560 NLKILIIRSARF----------------------SRGPKKLPNSLGVLDWSGYSSQSLPG 597

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPS--SIQNFKYLSALSFKGCQSLRSFPSNLHF 470
           +F PK L+ L+L            ++C+ S  S++ F+ LS L F+GC+ L   PS    
Sbjct: 598 DFNPKKLMMLSLH-----------ESCLISFKSLKVFESLSFLDFEGCKLLTELPSLSGL 646

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
           V    +    C NLI                     V  S+  L  L +L  + C +L+ 
Sbjct: 647 VNLGALCLDDCTNLIA--------------------VHKSVGFLNKLVLLSTQRCNQLEL 686

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
           +  +   L SL TL + GCL L+ FPE+L  ME+++ +Y D+T I +LP S  NL GL  
Sbjct: 687 LVPNI-NLPSLETLDMRGCLRLKSFPEVLGVMENIRYVYLDQTSIDKLPFSIRNLVGLRQ 745

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYILA 617
           LF+ +C+ L  LPD+I  L  L  I A
Sbjct: 746 LFLRECASLTQLPDSIHILPKLEIITA 772


>gi|15241520|ref|NP_199264.1| target of AVRB operation1 protein [Arabidopsis thaliana]
 gi|9758704|dbj|BAB09158.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007735|gb|AED95118.1| target of AVRB operation1 protein [Arabidopsis thaliana]
          Length = 1187

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 285/938 (30%), Positives = 460/938 (49%), Gaps = 147/938 (15%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVR------GNSETAGGLEHLQ 58
            + V+++GIWG  GIGKTT+++ ++++  H+F+    + +++       + E +  L+ LQ
Sbjct: 232  EEVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRPCHDEYSAKLQ-LQ 290

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            K++LS  +++K  V    +PH    +ER++  K+L+VLDDV+ + QL  +  ++  FG G
Sbjct: 291  KELLSQMINQKDMV----VPHLGVAQERLKDKKVLLVLDDVDGLVQLDAMAKDVQWFGLG 346

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SRI+V T+D ++L K  G  K IY+V+    +EA E FC +AF E          +R+V 
Sbjct: 347  SRIIVVTQDLKLL-KAHGI-KYIYKVDFPTSDEALEIFCMYAFGEKSPKVGFEQIARTVT 404

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            +     PL L V+GS L    K  W K    + R+  S   DI  +LK S+N L  + K 
Sbjct: 405  TLAGKLPLGLRVMGSYLRRMSKQEWAK---SIPRLRTSLDDDIESVLKFSYNSLAEQEKD 461

Query: 237  IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQ 293
            +FL I CFF  E  + +   L     D+   L IL DKSL+S++   + MH++L ++G  
Sbjct: 462  LFLHITCFFRRERIETLEVFLAKKSVDMRQGLQILADKSLLSLNLGNIEMHNLLVQLGLD 521

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK-IKG-INLDPRAFTNM 351
            IVR++S  +PGKR  L D ++I  VL  + GT  + GI L+LS  I+G IN+  RAF  M
Sbjct: 522  IVRKQSIHKPGKRQFLVDTEDICEVLTDDTGTRTLIGIDLELSGVIEGVINISERAFERM 581

Query: 352  SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
             NL+  +F+ P       +             + LP GL ++ +KLR LHW+ YPL  LP
Sbjct: 582  CNLQFLRFHHPYGDRCHDI-------------LYLPQGLSHISRKLRLLHWERYPLTCLP 628

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
              F P+ LV++N+R S +E+ W+G +      I+N K++  LSF  C +L+  P      
Sbjct: 629  PKFNPEFLVKINMRDSMLEKLWDGNEP-----IRNLKWMD-LSF--CVNLKELPDFSTAT 680

Query: 472  CPVTINFSYCVNLIEFPQISGKVTRL----YLGQSAIEEVPSSIECLTDLEVLDLRGCKR 527
                +    C++L+E P   G  T L     +  S++ ++PSSI  LT+L+ L L  C  
Sbjct: 681  NLQELRLINCLSLVELPSSIGNATNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSS 740

Query: 528  LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR-TPITELPSSFENLP 586
            L ++ +SF  + SL  L L GC +L   P  +  + +LK++Y+D  + + +LPSS  N  
Sbjct: 741  LVKLPSSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNT 800

Query: 587  GLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKG 645
             L+ L + +CS L   P ++ +L  L  + L+   ++ +LPS   + N L+SL  S C  
Sbjct: 801  NLKELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPSIGNVIN-LQSLYLSDCSS 859

Query: 646  LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMS 704
            L                         E+P  I   ++L+ LYL G +N   LP+ I  ++
Sbjct: 860  L------------------------MELPFTIENATNLDTLYLDGCSNLLELPSSIWNIT 895

Query: 705  QLRFIHLEDFNMLQSLPEL---PLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRS 761
             L+ ++L   + L+ LP L    + L+ L L+ C  L  LP   + + +L     +   S
Sbjct: 896  NLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIWRISNLSYLDVSNCSS 955

Query: 762  LPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEK 821
            L EL L              S P +P  L +L   +C  L         +Q LD      
Sbjct: 956  LLELNLV-------------SHPVVPDSL-ILDAGDCESL---------VQRLDC----- 987

Query: 822  LSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEM 881
                           ++  I   F NC KLN +A + I+  S  R               
Sbjct: 988  -------------FFQNPKIVLNFANCFKLNQEARDLIIQTSACRN-------------- 1020

Query: 882  AINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
                          +LPG ++P +F+ +++G S+ ++L
Sbjct: 1021 -------------AILPGEKVPAYFTYRATGDSLTVKL 1045


>gi|15238807|ref|NP_197337.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005160|gb|AED92543.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 900

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 234/697 (33%), Positives = 352/697 (50%), Gaps = 121/697 (17%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSET----AGGLE-HLQ 58
           S  V++VGIWG  GIGKTT+A+A+F++ S  F+ + F+ +V+G+S T    A G +  LQ
Sbjct: 204 STEVKMVGIWGPAGIGKTTIARALFNRLSENFQHTIFMENVKGSSRTSELDAYGFQLRLQ 263

Query: 59  KQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +Q LS  +  K +++    +    KER++ +K+L+VLDDV+++ QL  L+ +   FG GS
Sbjct: 264 EQFLSEVIDHKHMKIHDLGL---VKERLQDLKVLVVLDDVDKLEQLDALVKQSQWFGSGS 320

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+VTT +K++L         IY +      ++ + FC +AF E+  P+     +  +  
Sbjct: 321 RIIVTTENKQLLRAHGI--TCIYELGFPSRSDSLQIFCQYAFGESSAPDGCIELATEITK 378

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                PL L+VLGSSL    K      L    R+  S   DI ++L++ ++ +  + K I
Sbjct: 379 LAGYLPLALKVLGSSLRGMSKDEQKSALP---RLRTSLNEDIRNVLRVGYDGIHDKDKVI 435

Query: 238 FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS--GNFLNMHDILQEMGR 292
           FL IAC F GE+ D+V  IL  S  DV   L +L  +SL+ IS     + MH++L+++GR
Sbjct: 436 FLHIACLFNGENVDYVKQILASSGLDVTFGLQVLTSRSLIHISRCNRTITMHNLLEQLGR 495

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           +IV ++S  EPGKR  L D  EI  VL  N GT A+ GI LD+SKI  + L+ RAF  M 
Sbjct: 496 EIVCEQSIAEPGKRQFLMDASEIYDVLADNTGTGAVLGISLDISKINELFLNERAFGGMH 555

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NL   +FY           S S+++Q    ++ LP GLDYLP+KLR LHWD +P+ ++P 
Sbjct: 556 NLLFLRFY----------KSSSSKDQ---PELHLPRGLDYLPRKLRLLHWDAFPMTSMPL 602

Query: 413 NFKPKNLVELNLRCSKVEQPWEG------------------------------EKAC--- 439
           +F P+ LV +N+R S++E+ WEG                              E+ C   
Sbjct: 603 SFCPQFLVVINIRESQLEKLWEGTQPLRSLKQMDLSKSENLKEIPDLSKAVNIEELCLSY 662

Query: 440 ------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
                 +PSSI+N   L  L  K C  L   P N+       +N   C  L  FP+IS K
Sbjct: 663 CGSLVMLPSSIKNLNKLVVLDMKYCSKLEIIPCNMDLESLSILNLDGCSRLESFPEISSK 722

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           +  L L ++AIEE+P+++     L  LD+ GCK                        NL+
Sbjct: 723 IGFLSLSETAIEEIPTTVASWPCLAALDMSGCK------------------------NLK 758

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
            FP + + +E L      RT I E+P   + L  L  L +  C KL ++   I +LE+  
Sbjct: 759 TFPCLPKTIEWLDL---SRTEIEEVPLWIDKLSKLNKLLMNSCMKLRSISSGISTLEH-- 813

Query: 614 YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
                                +++LD   CK + SFP
Sbjct: 814 ---------------------IKTLDFLGCKNIVSFP 829



 Score = 47.4 bits (111), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 115/291 (39%), Gaps = 81/291 (27%)

Query: 554 HFPEILEKM-EHLKRIYSDRTPITELPSSF-------------------ENLPGLEVLFV 593
           H P  L+ +   L+ ++ D  P+T +P SF                   E    L  L  
Sbjct: 575 HLPRGLDYLPRKLRLLHWDAFPMTSMPLSFCPQFLVVINIRESQLEKLWEGTQPLRSLKQ 634

Query: 594 EDCSKLDNL---PDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
            D SK +NL   PD   ++      L+   ++  LPSS+   N L  LD  +C  LE  P
Sbjct: 635 MDLSKSENLKEIPDLSKAVNIEELCLSYCGSLVMLPSSIKNLNKLVVLDMKYCSKLEIIP 694

Query: 651 RTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFI 709
                                        L SL IL L G +  ES P I    S++ F+
Sbjct: 695 CNM-------------------------DLESLSILNLDGCSRLESFPEI---SSKIGFL 726

Query: 710 HLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCL 769
            L +     ++ E+P             + S P    CL +LD++GC  L++ P LP  +
Sbjct: 727 SLSE----TAIEEIP-----------TTVASWP----CLAALDMSGCKNLKTFPCLPKTI 767

Query: 770 QYLNLEDCNMLRSLPELPLCLQLLTVRN------CNRLQSLPEILLCLQEL 814
           ++L+L        + E+PL +  L+  N      C +L+S+   +  L+ +
Sbjct: 768 EWLDLSRTE----IEEVPLWIDKLSKLNKLLMNSCMKLRSISSGISTLEHI 814


>gi|224116210|ref|XP_002331988.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832112|gb|EEE70589.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1017

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 264/760 (34%), Positives = 385/760 (50%), Gaps = 109/760 (14%)

Query: 15  MGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAG 74
           MGGIGKTT+A+ ++D+   +FEGSCF+++VR       G   LQ+Q+LS  L E+  V  
Sbjct: 1   MGGIGKTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGRRRLQEQLLSEILMERASVWD 60

Query: 75  PNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFR 133
            +      K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+RDK+V+    
Sbjct: 61  SSRGIEMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPGSRIIITSRDKKVVTG-- 118

Query: 134 GEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSL 193
               +IY    L  ++A   F   A K +H  ED    S+ VV Y  G PL LEV+GS L
Sbjct: 119 NNNNRIYEAEKLNDDDALMLFSQKASKNDHPAEDFVELSKQVVGYANGLPLALEVIGSFL 178

Query: 194 CLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFV 253
             +    W   ++ +N I   +I    D+L+ISF+ L    K IFLDIACF  G   D +
Sbjct: 179 YDRSIPEWKSAINRMNEIPHGKI---IDVLRISFDGLHESDKKIFLDIACFLMGFKIDRI 235

Query: 254 ASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLW 310
             IL+         + ILI+KSL+S+S + + MH++LQ MG++IVR ES +EPG+RSRLW
Sbjct: 236 TRILESRGFHAGIGIPILIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLW 295

Query: 311 DPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
             +++   L  N                     + +AF+ MS LRL K            
Sbjct: 296 TYEDVCLALMDNTA-----------------QWNMKAFSKMSKLRLLKI----------- 327

Query: 371 PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
                      + VQL  G + L  KLR+L W +YP ++LP+  +   LVEL++  S +E
Sbjct: 328 -----------NNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIE 376

Query: 431 QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
           Q W G K+ V     N K                           IN S  +NLI+ P  
Sbjct: 377 QLWYGCKSAV-----NLK--------------------------IINLSNSLNLIKTPDF 405

Query: 491 SG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL 547
           +G   +  L L G +++ EV  S+     L+ ++L  C+ + RI  S  ++ SL    L 
Sbjct: 406 TGIPNLENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSI-RILPSNLEMESLKVFTLD 464

Query: 548 GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC----------- 596
           GC  LE FP+I+  M  L  +  D T I EL SS  +L GL +L + +C           
Sbjct: 465 GCSKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPSSIG 524

Query: 597 -------------SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
                        S L N+P+N+G +E L     + ++I QLP+SV L   L+ L    C
Sbjct: 525 CLKSLKKLDLSCCSALKNIPENLGKVESLEEFDVSGTSIRQLPASVFLLKNLKVLSLDGC 584

Query: 644 KGLESFPR-TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
           K +   P  + L  L  +GL    +    E+P++I YLSSL  L LS NNF SLP  I Q
Sbjct: 585 KRIVVLPSLSRLCSLEVLGL-RACNLREGELPEDIGYLSSLRSLDLSQNNFVSLPKAINQ 643

Query: 703 MSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
           +S+L  + LED  ML SLPE+P  ++ ++L  C+ L+++P
Sbjct: 644 LSELEMLVLEDCTMLASLPEVPSKVQTVNLNGCRSLKTIP 683


>gi|227438217|gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2301

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 241/737 (32%), Positives = 378/737 (51%), Gaps = 79/737 (10%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            MDS D V++VGIWGMGGIGK+T+AK +  + S +F+G CF+ + +   E  G   H++++
Sbjct: 1592 MDSGD-VRMVGIWGMGGIGKSTIAKFVCKRLSSKFDGVCFLENAKTEFEQYGS-SHMRQK 1649

Query: 61   MLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            +L   L  K   +        ++R+R   +L+V+D+V+ V QL+ L+G L+ FG GSRIV
Sbjct: 1650 VLREILRRKDLNSWDGDSGVMRQRLRGKSILLVIDNVDSVEQLQELVGSLEWFGPGSRIV 1709

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            +TTRDKRVLE+   E   IY V  L+  +A   F   AFK+   P+D    S  +V    
Sbjct: 1710 ITTRDKRVLEQHDVE--YIYEVKPLKTTQALMLFSKHAFKQPRPPKDSAELSIDIVKQLD 1767

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            G PL + V G++L  +  + W   L  L     S +      L+ SF  L  + K IFL 
Sbjct: 1768 GLPLAIRVAGAALYRRDIADWEYYLDLLRTNVNSSVSKA---LRESFEALNNQEKLIFLY 1824

Query: 241  IACFFEGEDKDFVASILD---------DSESDVLDILIDKSLVSISGN-FLNMHDILQEM 290
            +AC F G+    V+ +LD            +  +  L +K L+SIS    L +HD+LQ+M
Sbjct: 1825 VACCFNGKHMHGVSRVLDLFIVSGHMPFRSTLCIRTLKEKCLISISTTQRLWVHDVLQDM 1884

Query: 291  GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIE--GIFLDLSKIKGINLDPRAF 348
             R I+ +  E+ P KR  LW+  +I+ VL  N G++A+E   + LD+ K K + + P  F
Sbjct: 1885 ARSIICEGKEENPWKRKILWNFMDINNVLCENMGSEAVEVESLLLDMPKGKELCISPAIF 1944

Query: 349  TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
              M NL+L KFY           + ST  +   SK+ +P GL YLP  LRYLHW  Y L+
Sbjct: 1945 ERMYNLKLLKFY-----------NNSTGGE--SSKICMPGGLVYLPM-LRYLHWQAYSLK 1990

Query: 409  TLPSNFKPKNLVELNLRCSKVEQPWEGE-----------KAC-----VPS---------- 442
            +LPS F    LVELNL  S VE  W G            + C     VP+          
Sbjct: 1991 SLPSRFCTTYLVELNLPNSSVETLWNGTQDLGNLRRMNLRGCRRLLEVPNLSKATSLEKL 2050

Query: 443  -------------SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
                         S+++   L  L   GC+ L++ P+N++     T++   C +L +FP 
Sbjct: 2051 NLDNCESLVDLTDSVRHLNNLGVLELSGCKKLKNLPNNINLRLLRTLHLEGCSSLEDFPF 2110

Query: 490  ISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
            +S  V ++ L ++AIEE+P+SIE L++L+ L L GCK+LK +  +   + SL TL L  C
Sbjct: 2111 LSENVRKITLDETAIEEIPASIERLSELKTLHLSGCKKLKNLPRTIRNIDSLTTLWLSNC 2170

Query: 550  LNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
             N+  FPE+ + +E L       T I E+P++  +   L  L +  C +L NLP  + +L
Sbjct: 2171 PNITLFPEVGDNIESLAL---KGTAIEEVPATIGDKSRLCYLNMSGCQRLKNLPPTLKNL 2227

Query: 610  EYL-YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY 668
              L + +L   + I++ P +      L++LD +    +E    +       + +  ++ Y
Sbjct: 2228 TNLKFLLLRGCTNITERPETAC---RLKALDLNGTSIMEETSGSVQSDDEPLDMPRLAQY 2284

Query: 669  AVREIPQEIAYLSSLEI 685
             ++ + + I +  S+ +
Sbjct: 2285 ILQSVKERIRHQRSMRL 2301



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 155/403 (38%), Gaps = 112/403 (27%)

Query: 434  EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
            E  K C+P  +     L  L ++   SL+S PS             +C   +        
Sbjct: 1963 ESSKICMPGGLVYLPMLRYLHWQA-YSLKSLPSR------------FCTTYL-------- 2001

Query: 494  VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
               L L  S++E + +  + L +L  ++LRGC+RL  +  +  K  SL  L L  C +L 
Sbjct: 2002 -VELNLPNSSVETLWNGTQDLGNLRRMNLRGCRRLLEVP-NLSKATSLEKLNLDNCESL- 2058

Query: 554  HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
                                   +L  S  +L  L VL +  C KL NLP+NI       
Sbjct: 2059 ----------------------VDLTDSVRHLNNLGVLELSGCKKLKNLPNNINL----- 2091

Query: 614  YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
                                +LR+L    C  LE FP  FL     +  + + + A+ EI
Sbjct: 2092 -------------------RLLRTLHLEGCSSLEDFP--FLS--ENVRKITLDETAIEEI 2128

Query: 674  PQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
            P  I  LS L+ L+LSG    ++LP  I+ +  L                       L L
Sbjct: 2129 PASIERLSELKTLHLSGCKKLKNLPRTIRNIDSL---------------------TTLWL 2167

Query: 733  IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQ------YLNLEDCNMLRSLPEL 786
             +C  +   P +   +ESL L G     ++ E+P  +       YLN+  C  L++LP  
Sbjct: 2168 SNCPNITLFPEVGDNIESLALKGT----AIEEVPATIGDKSRLCYLNMSGCQRLKNLPPT 2223

Query: 787  P---LCLQLLTVRNCNRLQSLPEILLCLQELD---ASVLEKLS 823
                  L+ L +R C  +   PE    L+ LD    S++E+ S
Sbjct: 2224 LKNLTNLKFLLLRGCTNITERPETACRLKALDLNGTSIMEETS 2266


>gi|255582274|ref|XP_002531928.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223528407|gb|EEF30442.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 943

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 257/766 (33%), Positives = 385/766 (50%), Gaps = 107/766 (13%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGP-NIP 78
           KTT+A A ++  S +FEG  F+++VR  S     L   ++ +    + +K+++    N  
Sbjct: 47  KTTIATAYYNWMSIQFEGRAFLANVREVSSKGRLLSLQEQLLSEILMGKKVKIWNVYNGT 106

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K R+R  ++L+V+DDVN++ QL+ L G+ D FG GSR+++TTRD+ +L     +E  
Sbjct: 107 DMIKSRLRYKRVLVVIDDVNQLSQLQNLAGKSDWFGPGSRVIITTRDEHLLISHGVDE-- 164

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY+V GL   EA + F   AF+ NH  +D    S  +V Y  G PL LEVLGS L   R 
Sbjct: 165 IYKVKGLNKSEALQLFSLKAFRNNHPQKDYMTLSTDIVYYANGLPLALEVLGSFL-FNRT 223

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
               +  + L+RI E    +I D L+ISF+ L    K IFLDIACFF+G++ D +  ILD
Sbjct: 224 LEESR--NALDRIKEIPKDEILDALQISFDGLEEMEKQIFLDIACFFKGKNIDHITKILD 281

Query: 259 DSE--SDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                 D+ + +LI+KSL++I G  L MHD+LQEMG ++V+QES +EPG+RSRLW  K+I
Sbjct: 282 GCGFYPDIGIRVLIEKSLITIVGERLWMHDLLQEMGWKLVQQESPEEPGRRSRLWLYKDI 341

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
             VL  N GT  +EG+ LDL + + I L+ +AF  +  +RL KF                
Sbjct: 342 FHVLTKNTGTADVEGMVLDLPEAEEIQLEAQAFRKLKKIRLLKF---------------- 385

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
                   V     L+YL  +LRYL W  YP R LP  F+   L+ELN+  S+VEQ WEG
Sbjct: 386 ------RNVYFSQSLEYLSNELRYLKWYGYPFRNLPCTFQSNELLELNMSYSQVEQIWEG 439

Query: 436 EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG--K 493
            K         F  L  +                         S+  NL++ P   G   
Sbjct: 440 TK--------QFNKLKIM-----------------------KLSHSKNLVKTPDFRGVPS 468

Query: 494 VTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
           + +L L G   ++E+  SI  L  L +L+L+ CK+L  +  S   L++L  + L GC  L
Sbjct: 469 LEKLVLEGCLELQEIDQSIGILERLALLNLKDCKKLSILPESIYGLKALKIVNLSGCSIL 528

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           ++  E L  ++ L+ +    T + +  SSF +   L++L +  CS+    P  I +  +L
Sbjct: 529 DYMLEELGDIKSLEELDVSGTTVKQPFSSFSHFKNLKILSLRGCSE---QPPAIWN-PHL 584

Query: 613 YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
             +    S    L S       L  LD  +C   E                         
Sbjct: 585 SLLPGKGSNAMDLYS-------LMVLDLGNCNLQE-----------------------ET 614

Query: 673 IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
           IP +++ LSSL+   LSGNNF SLPA + ++S+L  ++L++   LQS+  +P  +K L  
Sbjct: 615 IPTDLSCLSSLKEFCLSGNNFISLPASVCRLSKLEHLYLDNCRNLQSMQAVPSSVKLLSA 674

Query: 733 IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCN 778
             C  L++LP      E+LDL+G    R       C + +  + CN
Sbjct: 675 QACSALETLP------ETLDLSGLQSPRF--NFTNCFKLVENQGCN 712



 Score = 99.8 bits (247), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 204/451 (45%), Gaps = 93/451 (20%)

Query: 561 KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAA 619
           K+ H K +   +TP       F  +P LE L +E C +L  +  +IG LE L  + L   
Sbjct: 450 KLSHSKNLV--KTP------DFRGVPSLEKLVLEGCLELQEIDQSIGILERLALLNLKDC 501

Query: 620 SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
             +S LP S+     L+ ++ S C  L+      L  + ++  L +S   V++     ++
Sbjct: 502 KKLSILPESIYGLKALKIVNLSGCSILDYMLEE-LGDIKSLEELDVSGTTVKQPFSSFSH 560

Query: 680 LSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ 739
             +L+IL L G + E  PAI      L  +  +  N +         L  L L +C + +
Sbjct: 561 FKNLKILSLRGCS-EQPPAIWN--PHLSLLPGKGSNAMDLYS-----LMVLDLGNCNLQE 612

Query: 740 -SLPVLPFCLESLD---LTGCNMLRSLPELPLC----LQYLNLEDCNMLRSLPELPLCLQ 791
            ++P    CL SL    L+G N + SLP   +C    L++L L++C  L+S+  +P  ++
Sbjct: 613 ETIPTDLSCLSSLKEFCLSGNNFI-SLPA-SVCRLSKLEHLYLDNCRNLQSMQAVPSSVK 670

Query: 792 LLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKL 851
           LL+ + C+ L++LPE       LD S L+     SP               F FTNC KL
Sbjct: 671 LLSAQACSALETLPET------LDLSGLQ-----SPR--------------FNFTNCFKL 705

Query: 852 --NGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQ 909
             N   NN  +   +LR     +++ + G++              I++PGSEIPDW S+Q
Sbjct: 706 VENQGCNN--IGFMMLRNYLQGLSNPKPGFD--------------IIIPGSEIPDWLSHQ 749

Query: 910 SSGS-SICIQLPPHSSCRNLIGFAFCAV--------LDSKKVDSDCFRYFYVSFQFDLEI 960
           S G  SI I+LPP       +GFA CAV        L+   +D  CF            I
Sbjct: 750 SLGDCSISIELPPVWCDSKWMGFALCAVYVIYQEPALNFIDMDLTCF------------I 797

Query: 961 KTLSETKHVDLGYNSRYIEDLIDSDRVILGF 991
           K    T   +L Y+   +E L+ SD+V L F
Sbjct: 798 KIKGHTWCHELDYSFAEME-LVGSDQVWLFF 827


>gi|359493572|ref|XP_002270741.2| PREDICTED: uncharacterized protein LOC100261885 [Vitis vinifera]
          Length = 2338

 Score =  333 bits (855), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 220/565 (38%), Positives = 313/565 (55%), Gaps = 43/565 (7%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           + V++VG++G+GGIGKTT+  A++++ S++FE    ++DVR  S    GL  LQ+Q+L+ 
Sbjct: 209 NDVRMVGVYGLGGIGKTTIINALYNRISNQFESVSLLTDVRKESTENSGLLKLQQQLLND 268

Query: 65  TLSEKLEVAGPNIPHFTKE---RVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
           TL    ++   ++    KE   ++   K+L+ LDDV+E+ QL+ LIG+ D FG GSRI++
Sbjct: 269 TLRTTRKIVLRDVHEGIKEIRDKLSSKKVLVFLDDVDELTQLEHLIGKHDWFGPGSRIII 328

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTR K +L   R E   +Y V  L F EA + FC +AFK++H  E     S  VV Y  G
Sbjct: 329 TTRKKDLLT--RHEVNDMYEVEKLYFHEALQLFCRYAFKQHHPKEGYGDLSHQVVQYADG 386

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L+VLGS L  KR   W   L  L ++   EI     +LKISF+ L    + IFLDI
Sbjct: 387 LPLALKVLGSLLFGKRLPDWKSELQKLEKVPNMEI---VKVLKISFDGLDYTQRMIFLDI 443

Query: 242 ACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQ 297
           ACFF G+D   V+ ILD SE +    ++ L+D+  ++IS  N ++MHD+L +MG+ IV Q
Sbjct: 444 ACFFRGDDVKRVSRILDASEFNAESGINALVDRCFITISKDNRIDMHDLLAQMGKGIVDQ 503

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
           E   EPG+RSRLW   +I RVLK N GT+ IEGI+L + K + I    +AF  M  LRL 
Sbjct: 504 ECPNEPGERSRLWRHIDIYRVLKRNTGTEKIEGIYLHVDKSEQIQFTSKAFERMHRLRLL 563

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
                                +S++ VQL     + P  L YL W+ Y L +LPSNF   
Sbjct: 564 --------------------SISHNHVQLSKDFVF-PYDLTYLRWNGYSLESLPSNFHAN 602

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
           NLV L L  S ++  W+G            + L  ++    Q L   P+  +      + 
Sbjct: 603 NLVSLILGNSNIKLLWKGNMC--------LRNLRRINLSDSQQLIELPNFSNVPNLEELI 654

Query: 478 FSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
            S C+ L++      K+  L L ++AI+E+PSSIE L  L  L+L  CK L+ +  S C 
Sbjct: 655 LSGCIILLK--SNIAKLEELCLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICN 712

Query: 538 LRSLVTLILLGCLNLEHFPEILEKM 562
           LR LV L L GC  L+  PE LE+M
Sbjct: 713 LRFLVVLSLEGCSKLDRLPEDLERM 737



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 143/257 (55%), Gaps = 27/257 (10%)

Query: 511  IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYS 570
            IE  ++ + L LR CK L+ + TS  + +SL +L    C  L++FPEILE ME+L+ ++ 
Sbjct: 1100 IEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFPEILENMENLRELHL 1159

Query: 571  DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSV 629
            + T I ELPSS E+L  LEVL +E C KL  LP++I +L +L  + ++  S + +LP ++
Sbjct: 1160 NETAIKELPSSIEHLNRLEVLNLEGCKKLVTLPESICNLCFLEVLDVSYCSKLHKLPQNL 1219

Query: 630  ALSNMLR-----SLDSSHCK-----GLESFPRTFLLGLSAMGLLHISD----YAVR---- 671
                 L+      L+S+ C+     GL S     L G   M  + +SD    Y++     
Sbjct: 1220 GRLQSLKHLCACGLNSTCCQLVSLLGLCSLKNLILPGSKLMQGVVLSDICCLYSLEVLDL 1279

Query: 672  --------EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL 723
                     IP EI +LSSL+ L+LSGN F S+P+ + Q+S LR ++L     L+ +P L
Sbjct: 1280 SFCRIDEGGIPTEICHLSSLQHLHLSGNLFRSIPSGVNQLSMLRILNLGHCQELRQIPAL 1339

Query: 724  PLCLKYLHLIDCKMLQS 740
            P  L+ L + +C  L++
Sbjct: 1340 PSSLRVLDVHECPWLET 1356



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 124/247 (50%), Gaps = 36/247 (14%)

Query: 496  RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
            +L L    I  +P  IE  ++ + L LR CK L+ + TS  + +SL +L    C  L++F
Sbjct: 1877 KLCLKGQTISLLP--IEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYF 1934

Query: 556  PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
            PEILE ME+L+ ++ + T I ELPSS E+L  LEVL ++ C  L               +
Sbjct: 1935 PEILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLDRCENL---------------L 1979

Query: 616  LAAASAISQLPSSVALSNMLRSLDSSHCKGLE--SFPRTFLLGLSAMGLLHISDYAVREI 673
            L     I+  P   A       L++S C  L+    P  F +G+   G           I
Sbjct: 1980 LFKTPQIATKPREAA------KLEASPCLWLKFNMLPIAFFVGIDEGG-----------I 2022

Query: 674  PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI 733
            P EI +LSSL  L L+GN F S+P+ + Q+S LR + L     L+ +P LP  L+ L + 
Sbjct: 2023 PTEICHLSSLRQLLLTGNLFRSIPSGVNQLSMLRLLDLGHCQELRQIPALPSSLRVLDVH 2082

Query: 734  DCKMLQS 740
            +C  L++
Sbjct: 2083 ECTRLET 2089



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/105 (47%), Positives = 70/105 (66%), Gaps = 1/105 (0%)

Query: 496  RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
            +L L  SAI E+P+ IEC  + + L LR CK L+R+ +S C+L+SL TL   GC  L  F
Sbjct: 1561 KLCLKGSAINELPT-IECPLEFDSLCLRECKNLERLPSSICELKSLTTLNCSGCSRLRSF 1619

Query: 556  PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
            PEILE +E+L+ ++ D T I ELP+S + L GL+ L + DC+ LD
Sbjct: 1620 PEILEDVENLRNLHLDGTAIKELPASIQYLRGLQCLNLADCTNLD 1664



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 116/486 (23%), Positives = 201/486 (41%), Gaps = 80/486 (16%)

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
            LP+S      L+ LF   CS+L   P+ + ++E L  +    +AI +LPSS+   N L  
Sbjct: 1120 LPTSIWEFKSLKSLFCSHCSQLQYFPEILENMENLRELHLNETAIKELPSSIEHLNRLEV 1179

Query: 638  LDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILYLSGNNFESL 696
            L+   CK L + P + +  L  + +L +S  + + ++PQ +  L SL+ L   G N    
Sbjct: 1180 LNLEGCKKLVTLPES-ICNLCFLEVLDVSYCSKLHKLPQNLGRLQSLKHLCACGLNSTCC 1238

Query: 697  PAI-IKQMSQLRFIHLEDFNMLQSLPELPLCLKY-LHLID---CKMLQSLPVLPFC---- 747
              + +  +  L+ + L    ++Q +    +C  Y L ++D   C++ +       C    
Sbjct: 1239 QLVSLLGLCSLKNLILPGSKLMQGVVLSDICCLYSLEVLDLSFCRIDEGGIPTEICHLSS 1298

Query: 748  LESLDLTGCNMLRSLP----ELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQS 803
            L+ L L+G N+ RS+P    +L + L+ LNL  C  LR +P LP  L++L V  C  L++
Sbjct: 1299 LQHLHLSG-NLFRSIPSGVNQLSM-LRILNLGHCQELRQIPALPSSLRVLDVHECPWLET 1356

Query: 804  LPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADS 863
                                  S  L W+              NC K             
Sbjct: 1357 ----------------------SSGLLWS-----------SLFNCFK------------- 1370

Query: 864  LLRIRHMAIASLRLGYEMAINEKLSEL-RGSLIVLPGSEIPDWFSNQSSGSSICIQLPPH 922
                      SL   +E  I  + S   R +LI+     IP W S+   G+ +  +LP +
Sbjct: 1371 ----------SLIQDFECRIYPRDSLFARVNLIISGSCGIPKWISHHKKGAKVVAKLPEN 1420

Query: 923  SSCRN-LIGFAFCAVLDSKKVDSD-CFRYFYVSFQFDLEIKTLSETKHVD--LGYNSRYI 978
                N L+GF   ++ D    +S+          +  L ++   E++ VD    Y S   
Sbjct: 1421 WYKNNDLLGFVLYSLYDPLDNESEETLENDAAYLKCSLTLRA-HESQFVDELQFYPSFRC 1479

Query: 979  EDLIDSDRVILGFKPCLNVGF-PDGYHHTIATFKFFAERKFYKIKRCGLCPVYANPSETK 1037
             D++    +I   K  +   +  + +    A+F  F+  K  K++ CG+  +YA+  E  
Sbjct: 1480 YDVVPKMWMIYYAKVVIEKKYHSNKWRQLTASFCGFSHGKAMKVEECGIHLIYAHDHEKN 1539

Query: 1038 DNTFTI 1043
            +    I
Sbjct: 1540 NGKAMI 1545



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 40/240 (16%)

Query: 421  ELNLRCSKVEQPWEGEKACVPSS------IQNFKYLSALSFKGCQSLRSFPSNL-HFVCP 473
            +++ RC   ++  E  K C+         I++      L  + C++L S P+++  F   
Sbjct: 1861 DVDARCLDCQRNVEHRKLCLKGQTISLLPIEHASEFDTLCLRECKNLESLPTSIWEFKSL 1920

Query: 474  VTINFSYCVNLIEFPQI---SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
             ++  S+C  L  FP+I      +  L+L ++AI+E+PSSIE L  LEVL+L  C+ L  
Sbjct: 1921 KSLFCSHCSQLQYFPEILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLDRCENLLL 1980

Query: 531  ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
              T                      P+I  K     ++  + +P   L   F  LP    
Sbjct: 1981 FKT----------------------PQIATKPREAAKL--EASPCLWL--KFNMLPIAFF 2014

Query: 591  LFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
            + +++      +P  I  L  L  +L   +    +PS V   +MLR LD  HC+ L   P
Sbjct: 2015 VGIDE----GGIPTEICHLSSLRQLLLTGNLFRSIPSGVNQLSMLRLLDLGHCQELRQIP 2070



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 137/345 (39%), Gaps = 85/345 (24%)

Query: 610  EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA 669
            E+    L     +  LP+S+     L+SL  SHC  L+ FP   L  +  +  LH+++ A
Sbjct: 1895 EFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFPE-ILENMENLRELHLNETA 1953

Query: 670  VREIPQEIAYLSSLEILYLSGNNFESL-----PAIIKQMSQLRFIHLE-----DFNMLQS 719
            ++E+P  I +L+ LE+L L  +  E+L     P I  +  +   +         FNML  
Sbjct: 1954 IKELPSSIEHLNRLEVLNL--DRCENLLLFKTPQIATKPREAAKLEASPCLWLKFNMLP- 2010

Query: 720  LPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLP----ELPLCLQYLNLE 775
                   + +   ID   + +       L  L LTG N+ RS+P    +L + L+ L+L 
Sbjct: 2011 -------IAFFVGIDEGGIPTEICHLSSLRQLLLTG-NLFRSIPSGVNQLSM-LRLLDLG 2061

Query: 776  DCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPES 835
             C  LR +P LP  L++L V  C RL++                      S  L W+   
Sbjct: 2062 HCQELRQIPALPSSLRVLDVHECTRLET----------------------SSGLLWS--- 2096

Query: 836  LKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLI 895
                       NC K                       SL   +E  I  + +      +
Sbjct: 2097 --------SLFNCFK-----------------------SLIQDFECRIYPRENRFARVHL 2125

Query: 896  VLPGS-EIPDWFSNQSSGSSICIQLPPHSSCRN-LIGFAFCAVLD 938
            ++ GS  IP W S+   G+ +  +LP +    N L+GF   ++ D
Sbjct: 2126 IISGSCGIPKWISHHKKGAKVVAELPENWYKNNDLLGFVLYSLYD 2170



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 78/152 (51%), Gaps = 18/152 (11%)

Query: 540 SLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSK 598
           +LV+LIL G  N++   +    + +L+RI  SD   + ELP+ F N+P LE L +  C  
Sbjct: 603 NLVSLIL-GNSNIKLLWKGNMCLRNLRRINLSDSQQLIELPN-FSNVPNLEELILSGCII 660

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT-----F 653
           L  L  NI  LE L       +AI +LPSS+ L   LR L+  +CK LE  P +     F
Sbjct: 661 L--LKSNIAKLEEL---CLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICNLRF 715

Query: 654 LLGLSAMGLLHISDYAVREIPQEIAYLSSLEI 685
           L+ LS  G   +       +P+++  +  LE+
Sbjct: 716 LVVLSLEGCSKLD-----RLPEDLERMPCLEL 742



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 124/302 (41%), Gaps = 60/302 (19%)

Query: 764  ELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCN---RLQSLPEILLCLQELDASVLE 820
            E PL    L L +C  L  LP     L+ LT  NC+   RL+S PEIL      D   L 
Sbjct: 1576 ECPLEFDSLCLRECKNLERLPSSICELKSLTTLNCSGCSRLRSFPEILE-----DVENLR 1630

Query: 821  KLSKHSPDLQWAPESLK--SAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLG 878
             L      ++  P S++      C    +C  L+              ++H   ++   G
Sbjct: 1631 NLHLDGTAIKELPASIQYLRGLQCLNLADCTNLD--------------LKHEKSSN---G 1673

Query: 879  YEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLPPHS-SCRNLIGFAFCAV 936
              +  ++ + +  G  IV+PGS  IP W  NQ  G  I ++LP +     + +G A C V
Sbjct: 1674 VFLPNSDYIGD--GICIVVPGSSGIPKWIRNQREGYRITMELPQNCYENDDFLGIAICCV 1731

Query: 937  ---LD------------SKKVDSDCFRYFYVSFQFDLEIK-TLSE--------TKHVDLG 972
               LD            + + +SD       S   +L+ + +LSE         +H+   
Sbjct: 1732 YAPLDECEDIPENDFAHTLENESDDLLEAESSISTELQCQLSLSEGYGSSSLCVRHLSFR 1791

Query: 973  YNSRYIEDLIDSDRVILGFKP---CLNVGFPDGYHHTIATFKFFAERKFYKIKRCGLCPV 1029
               +   +   S+++ + F P    L  G  + + +  ATFK    +  +K+ +CGL P+
Sbjct: 1792 STCKCYHNGGVSEQMWVIFYPKAAILESGPTNPFMYLAATFK--DPQSHFKVLKCGLQPI 1849

Query: 1030 YA 1031
            Y+
Sbjct: 1850 YS 1851



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 1/93 (1%)

Query: 597  SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
            S ++ LP     LE+    L     + +LPSS+     L +L+ S C  L SFP   L  
Sbjct: 1567 SAINELPTIECPLEFDSLCLRECKNLERLPSSICELKSLTTLNCSGCSRLRSFPE-ILED 1625

Query: 657  LSAMGLLHISDYAVREIPQEIAYLSSLEILYLS 689
            +  +  LH+   A++E+P  I YL  L+ L L+
Sbjct: 1626 VENLRNLHLDGTAIKELPASIQYLRGLQCLNLA 1658



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 20/89 (22%)

Query: 440  VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
            +PSSI   K L+ L+  GC  LRSFP  L  V                      +  L+L
Sbjct: 1595 LPSSICELKSLTTLNCSGCSRLRSFPEILEDV--------------------ENLRNLHL 1634

Query: 500  GQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
              +AI+E+P+SI+ L  L+ L+L  C  L
Sbjct: 1635 DGTAIKELPASIQYLRGLQCLNLADCTNL 1663


>gi|28558777|gb|AAO45748.1| MRGH5 [Cucumis melo subsp. melo]
          Length = 1092

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 291/888 (32%), Positives = 437/888 (49%), Gaps = 103/888 (11%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            M  S+ V ++GI+G+GGIGKTTLAKA++D+ + +FEG C++ DVR  S+   GL  LQK+
Sbjct: 209  MYKSECVNMLGIYGIGGIGKTTLAKALYDKMASQFEGCCYLRDVREASKLFDGLTQLQKK 268

Query: 61   MLSTTLSEKLEVA----GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            +L   L   LEV     G NI    K R+R  K+LI+LDDV+++ QL+ L+G  D FGQG
Sbjct: 269  LLFQILKYDLEVVDLDWGINI---IKNRLRSKKVLILLDDVDKLEQLQALVGGHDWFGQG 325

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            ++I+VTTR+K++L     +  K+Y V GL   EA E F   AFK      +    S    
Sbjct: 326  TKIIVTTRNKQLLVSHGFD--KMYEVQGLSKHEAIELFRRHAFKNLQPSSNYLDLSERAT 383

Query: 177  SYTKGNPLVLEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
             Y  G+PL L VLGS LC +   + W  +L        S   DI DIL++SF+ L   VK
Sbjct: 384  RYCTGHPLALIVLGSFLCDRSDLAEWSGILDGFE---NSLRKDIKDILQLSFDGLEDEVK 440

Query: 236  SIFLDIACFFEGEDKDFVASILDDSESDVLDILIDK----SLVSISGNFLNMHDILQEMG 291
             IFLDI+C   G+   +V  +L +  S +LD  I K    SL+    + + MHD++++MG
Sbjct: 441  EIFLDISCLLVGKRVSYVKKMLSECHS-ILDFGITKLKDLSLIRFEDDRVQMHDLIKQMG 499

Query: 292  RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTN 350
             +IV  ES  +PGKRSRLW  K+I  V  +N G+DA++ I L L+  K  I+LDP AF +
Sbjct: 500  HKIVHDESHDQPGKRSRLWLEKDILEVFSNNSGSDAVKAIKLVLTDPKRVIDLDPEAFRS 559

Query: 351  MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
            M NLR+                      +    V+    + YLP  L+++ W  +   +L
Sbjct: 560  MKNLRIL---------------------MVDGNVRFCKKIKYLPNGLKWIKWHRFAHPSL 598

Query: 411  PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY---------------LSALSF 455
            PS F  K+LV L+L+ S +    +G + C+   + + ++               L  L  
Sbjct: 599  PSCFITKDLVGLDLQHSFITNFGKGLQNCMRLKLLDLRHSVILKKISESSAAPNLEELYL 658

Query: 456  KGCQSLRSFP-SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSS---- 510
              C +L++ P S L     VT++  +CVNL + P       R Y+   A+E++  S    
Sbjct: 659  SNCSNLKTIPKSFLSLRKLVTLDLHHCVNLKKIP-------RSYISWEALEDLDLSHCKK 711

Query: 511  ------IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK--M 562
                  I   ++L  L    C  L  I  S   L  LVTL L  C NL+  P  +    +
Sbjct: 712  LEKIPDISSASNLRSLSFEQCTNLVMIHDSIGSLTKLVTLKLQNCSNLKKLPRYISWNFL 771

Query: 563  EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASA 621
            + L   +  +  + E+P  F +   L+ L +E C+ L  + D+IGSL  L  + L   S 
Sbjct: 772  QDLNLSWCKK--LEEIPD-FSSTSNLKHLSLEQCTSLRVVHDSIGSLSKLVSLNLEKCSN 828

Query: 622  ISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLS 681
            + +LPS + L + L++L  S C  LE+FP      + ++ +L +   A+RE+P  I YL+
Sbjct: 829  LEKLPSYLKLKS-LQNLTLSGCCKLETFPE-IDENMKSLYILRLDSTAIRELPPSIGYLT 886

Query: 682  SLEILYLSG-NNFESLPAIIKQMSQLRFIHL------EDFNMLQSLPELPLC----LKYL 730
             L +  L G  N  SLP     +  L  +HL      E F+ +      P+C    +   
Sbjct: 887  HLYMFDLKGCTNLISLPCTTHLLKSLGELHLSGSSRFEMFSYIWDPTINPVCSSSKIMET 946

Query: 731  HLIDCKMLQSLPVLPFCLES---LDLTGCNMLR-SLPELPLCLQYLNLEDCNMLRSLPEL 786
             L        +P    C +    LDL GCN+      E+   +            +   L
Sbjct: 947  SLTSEFFHSRVPKESLCFKHFTLLDLEGCNISNVDFLEILCNVASSLSSILLSENNFSSL 1006

Query: 787  PLCLQL------LTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPD 828
            P CL        L +RNC  LQ +P + LC+Q +DA+    LS+ SP+
Sbjct: 1007 PSCLHKFMSLRNLELRNCKFLQEIPNLPLCIQRVDATGCVSLSR-SPN 1053


>gi|105922695|gb|ABF81431.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
 gi|105923067|gb|ABF81454.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 918

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 231/644 (35%), Positives = 335/644 (52%), Gaps = 73/644 (11%)

Query: 10  VGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK 69
           +GI GMGG+GKTT+A+ ++D+   +FEGSCF+++V+ +     G   LQ+Q+LS  L E+
Sbjct: 144 IGICGMGGLGKTTVARVVYDRIRWQFEGSCFLANVKEDFAREDGPRRLQEQLLSEILMER 203

Query: 70  LEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRV 128
             V          K R+R  K+L++LDDV+E  QL+ L  E   FG GSRI++T+RDK+V
Sbjct: 204 ASVWDSYRGIEMIKRRLRLKKILLILDDVDEKEQLEFLAAESKWFGPGSRIIITSRDKQV 263

Query: 129 LEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEV 188
           L   R    +IY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV
Sbjct: 264 LT--RNGVARIYEAEKLNDDDALTLFSQKAFKNDQPAEDFVELSKQVVGYATGLPLALEV 321

Query: 189 LGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGE 248
           +GS +  +    WG  ++ LN I + EI    D+L+ISF+ L    K IFLDIACF  G 
Sbjct: 322 IGSFMHGRSILEWGSAINRLNDIPDREI---IDVLRISFDGLHESDKKIFLDIACFLMGF 378

Query: 249 DKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGK 305
             D +  IL+    +    + +LI++SL+S+S + + MH++LQ MG++IVR ES +EPG+
Sbjct: 379 KIDRITRILESRGFNAGIGISVLIERSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGR 438

Query: 306 RSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFY 365
           RSRLW  K++   L  N G + IE IFLD+  IK    + +AF+ MS LRL K +     
Sbjct: 439 RSRLWTYKDVCLALMDNTGKEKIEAIFLDMPGIKEAQWNMKAFSKMSRLRLLKIH----- 493

Query: 366 EIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLR 425
                             VQL  G + L  +LR+L W++YP ++LP+ F+   LVEL++ 
Sbjct: 494 -----------------NVQLSEGPEALSNELRFLEWNSYPSKSLPACFQMDELVELHMA 536

Query: 426 CSKVEQPWEGEKACVPSSIQNF-------------------------------------- 447
            S +EQ W G K+ V   I N                                       
Sbjct: 537 NSSIEQLWYGYKSAVNLKIINLSNSLNLIKTPDLTGILNLESLILEGCTSLSEVHPSLAH 596

Query: 448 -KYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV---TRLYLGQSA 503
            K L  ++   C+S+R  P+NL            C  L +FP I G +   T L L ++ 
Sbjct: 597 HKKLQYVNLVKCKSIRILPNNLEMESLKVCTLDGCSKLEKFPDIVGNMNCLTVLCLDETG 656

Query: 504 IEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKME 563
           I ++ SSI  L  L +L +  CK L+ I +S   L+SL  L L GC  L++ PE L K+E
Sbjct: 657 ITKLCSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVE 716

Query: 564 HLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
            L+      T I +LP+S   L  L+VL  + C ++  LP   G
Sbjct: 717 SLEEFDVSGTSIRQLPASIFLLKNLKVLSSDGCERIAKLPSYSG 760



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 144/297 (48%), Gaps = 32/297 (10%)

Query: 630 ALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS 689
           ALSN LR L+ +     +S P  F   +  +  LH+++ ++ ++        +L+I+ LS
Sbjct: 503 ALSNELRFLEWNSYPS-KSLPACF--QMDELVELHMANSSIEQLWYGYKSAVNLKIINLS 559

Query: 690 GN-NFESLPAIIKQMSQLRFIHLEDFNMLQSL-PELP--LCLKYLHLIDCKMLQSLPVLP 745
            + N    P +   ++ L  + LE    L  + P L     L+Y++L+ CK ++ LP   
Sbjct: 560 NSLNLIKTPDLTGILN-LESLILEGCTSLSEVHPSLAHHKKLQYVNLVKCKSIRILPN-N 617

Query: 746 FCLESLD---LTGCNMLRSLPELPL---CLQYLNLEDCNMLR---SLPELPLCLQLLTVR 796
             +ESL    L GC+ L   P++     CL  L L++  + +   S+  L + L LL++ 
Sbjct: 618 LEMESLKVCTLDGCSKLEKFPDIVGNMNCLTVLCLDETGITKLCSSIHHL-IGLGLLSMN 676

Query: 797 NCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKAN 856
           +C  L+S+P  + CL+ L    L   S    +L++ PE+L       EF     ++G + 
Sbjct: 677 SCKNLESIPSSIGCLKSLKKLDLSGCS----ELKYIPENLGKVESLEEFD----VSGTSI 728

Query: 857 NKILADSLLRIRHMAIASLRLGYEMAINEKLSELR----GSLIVLPGSEIPDWFSNQ 909
            ++ A S+  ++++ + S      +A     S L     G  I +PG+EIP WF++Q
Sbjct: 729 RQLPA-SIFLLKNLKVLSSDGCERIAKLPSYSGLSNPRPGFGIAIPGNEIPGWFNHQ 784



 Score = 47.4 bits (111), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 109/251 (43%), Gaps = 26/251 (10%)

Query: 561 KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAAS 620
           +M+ L  ++   + I +L   +++   L+++ + +   L   PD  G L     IL   +
Sbjct: 526 QMDELVELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLIKTPDLTGILNLESLILEGCT 585

Query: 621 AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAY 679
           ++S++  S+A    L+ ++   CK +   P    L + ++ +  +   + + + P  +  
Sbjct: 586 SLSEVHPSLAHHKKLQYVNLVKCKSIRILPNN--LEMESLKVCTLDGCSKLEKFPDIVGN 643

Query: 680 LSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ 739
           ++ L +L L       L + I  +  L  + +     L+S+P    CLK           
Sbjct: 644 MNCLTVLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESIPSSIGCLK----------- 692

Query: 740 SLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCN--MLRSLPE---LPLCLQLLT 794
                   L+ LDL+GC+ L+ +PE    ++ L   D +   +R LP    L   L++L+
Sbjct: 693 -------SLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQLPASIFLLKNLKVLS 745

Query: 795 VRNCNRLQSLP 805
              C R+  LP
Sbjct: 746 SDGCERIAKLP 756


>gi|227438183|gb|ACP30581.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1232

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 265/838 (31%), Positives = 408/838 (48%), Gaps = 141/838 (16%)

Query: 10  VGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK 69
           +G+WGM GIGKTTLA+AIFDQ S  +E SCF+ D        G L  L ++    TL E+
Sbjct: 179 IGLWGMAGIGKTTLAEAIFDQMSGGYEASCFIKDFNKKFHEKG-LHCLLEEHFGKTLREE 237

Query: 70  LEVAG-PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRV 128
             V      P   +  + + ++L+VLDDV +    +  +G  + F  GS I++T+RDK+V
Sbjct: 238 FGVNSLITRPVLLRNVLGQKRVLVVLDDVRKALDAELFLGGFNWFCPGSLIIITSRDKQV 297

Query: 129 LEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEV 188
                 + K+IY V GL  +EA + F  FAF ++   E+L      V+ Y  GNPL L+ 
Sbjct: 298 FS--LCQVKQIYEVPGLNEDEAQQLFSRFAFGKDIKHENLQKLLPKVIEYADGNPLALKY 355

Query: 189 LGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGE 248
            G     K + +  +V +    + +S  H+IYD +K +++ L+   K+IFLDI C F GE
Sbjct: 356 YGR----KTRDNPKEVENAFLTLEQSPPHEIYDAVKSTYDLLSSNEKNIFLDIVCLFRGE 411

Query: 249 DKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGK 305
             D+V  +L+         +++L++K LVSIS   + MH+++Q++GR+I+ +   +    
Sbjct: 412 SIDYVMHLLEGCGFFPRVGINVLVEKCLVSISQGKVVMHNLIQDIGRKIINRRKRR---- 467

Query: 306 RSRLWDPKEISRVL--KHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPK 363
            SRLW P  I   L  K+  G++ IE I LD S +   +L+P AF  M NLR  K     
Sbjct: 468 -SRLWKPSSIKHFLEDKNVLGSEDIEAISLDTSDL-NFDLNPMAFEKMYNLRYLK----- 520

Query: 364 FYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELN 423
                    + + +  SYS + LP GL  LP +LR LHW+ +PL +LP  F P+NLV LN
Sbjct: 521 ---------ICSSKPGSYSTIHLPKGLKSLPDELRLLHWENFPLLSLPQGFDPRNLVILN 571

Query: 424 LRCSKVEQPWEGEKA---------CVP------SSIQNFKYLSALSFKGCQSLRSFPSNL 468
           +  SK+++ WEG K          C          +QN + +  +  +GC  L  F    
Sbjct: 572 MCSSKLQRLWEGTKELEMLKRIKLCHSRKLVDIQELQNARNIEVIDLQGCTRLERFIDTG 631

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVP-------------------- 508
           HF     IN S C+N+  FP++  K+  LYL Q+AI  +P                    
Sbjct: 632 HFHHLRVINLSGCINIKVFPKVPPKIEELYLKQTAIRSIPNVTLSSKDNSFSYDHGGHKF 691

Query: 509 --------SSIECLTDLEVLDLRGCKRLKRI-------------STSFCKLRSLVTLILL 547
                   S +  L  L+VLDL  C  L+ I              TS  +L SLV L  L
Sbjct: 692 LDLEDSSESIMVYLEQLKVLDLSRCIELEDIQVIPNNLKKLYLGGTSIQELPSLVHLSEL 751

Query: 548 GCLNLEHFPEI-----------------------LEKME------HLKRIYSDRTPITEL 578
             L+LE+  ++                       LE +E      +L+ +Y   T I E+
Sbjct: 752 VVLDLENCKQLQKIPLRLSTLTSLAVLNLSGCSELEDIEDLNLPRNLEELYLAGTAIQEV 811

Query: 579 PSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPS----SVALSNM 634
           PSS   L  L +L +++C +L  LP  I +L+ L  +        +LP        +SN+
Sbjct: 812 PSSITYLSELVILDLQNCKRLRRLPMEISNLKSLVTL--------KLPRLFTVETGMSNL 863

Query: 635 LRSLDSSHCKGLESFPRTFLLGLS-----------AMGLLHISDYAVREIPQEIAYLSSL 683
           + + + + C+  +  P+  LL  S           A+  L + + ++  IP+EI  L+++
Sbjct: 864 ISAFNENVCQRQDYLPQPRLLPSSRLLHGLVPRFYALVSLSLCNASLMHIPEEICSLATV 923

Query: 684 EILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
            +L LS N F  +P  IKQ+ +L  + L     L+SLPELP  LK L++  C  L+S+
Sbjct: 924 TVLDLSRNGFRKIPESIKQLCKLHSLRLRHCRNLRSLPELPQSLKILNVHGCVSLESV 981


>gi|449452168|ref|XP_004143832.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1217

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 277/862 (32%), Positives = 422/862 (48%), Gaps = 134/862 (15%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            D  D V +VGI GMGGIGKTTLAKA++++ +++FE  CF+S+VR   E    L  LQ+++
Sbjct: 215  DVPDGVNMVGIHGMGGIGKTTLAKALYNKIAYQFEACCFLSNVRETLEQFKDLVQLQEKL 274

Query: 62   LSTTLSEKLEVAGPNI---PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            LS  L +     G N+    +  ++R+   K+LI+LDDV++  QL  L+GE D FG+GS+
Sbjct: 275  LSEILKDNAWKVG-NVHKGKNIIRDRLCSKKVLIILDDVDKDEQLDALVGERDWFGRGSK 333

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            I+ TTRD+ +LE    +   +Y +  L+ +++ E F   AFK+NH   +    S+  VSY
Sbjct: 334  IIATTRDRHLLENHSFD--IVYPIQLLDPKKSLELFSLHAFKQNHPSSNYVDLSKFAVSY 391

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             KG PL L +LGS L  + +  W   LH+L    E  +  ++   +I F +L  RVK IF
Sbjct: 392  CKGLPLALVILGSLLHKRERKIWKSKLHELENSLEPSVEAVF---QIGFKELHERVKEIF 448

Query: 239  LDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
            LDI+CFF GED ++   +L   D   D  + IL+D SLV++    + MHD++Q+MG+ IV
Sbjct: 449  LDISCFFVGEDINYSKDVLKACDLNPDYGIIILMDLSLVTVEDGKIQMHDLIQQMGQTIV 508

Query: 296  RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINL-DPRAFTNMSNL 354
            R ES  EP KRSRLW+ +   ++LK   GT A++ I LDL     + + +  AF NM NL
Sbjct: 509  RHES-FEPAKRSRLWEAEGAIKILKEKSGTKAVKAIKLDLHYKPWLKIVEAEAFRNMKNL 567

Query: 355  RLFKF----YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
            RL       Y PK                        N  +YLP  L+++ W T+ +   
Sbjct: 568  RLLILQRVAYFPK------------------------NIFEYLPNSLKWIEWSTFYVNQS 603

Query: 411  PS-NFKPKN-LVELNLRCSKVEQPWEGEKAC----------------------------- 439
             S +F  K  LV L ++    +QP    + C                             
Sbjct: 604  SSISFSVKGRLVGLVMKGVVNKQPRIAFENCKTMKHVDLSYCGTLKETPNFSATLNLEKL 663

Query: 440  ----------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI-NFSYCVNLIEFP 488
                      +  S+ +   L  L  +GC +L  FPS+   +  + + N S C  + E P
Sbjct: 664  YLRGCTSLKVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIP 723

Query: 489  QISG--KVTRLYLGQ-SAIEEVPSSI-ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
             +S    +  LYL +   +  +  SI   L  L +LDL GCK L+R+ TS  K +SL  L
Sbjct: 724  DLSASSNLKELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLERLPTSHLKFKSLKVL 783

Query: 545  ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
             L  CLNLE   EI++                     F     LE+L +  C  L  + +
Sbjct: 784  NLRNCLNLE---EIID---------------------FSMASNLEILDLNTCFSLRIIHE 819

Query: 605  NIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLL 663
            +IGSL+ L  + L     + +LPSS+ L + L SL  ++C  LE  P  F   + ++ ++
Sbjct: 820  SIGSLDKLITLQLDLCHNLEKLPSSLKLKS-LDSLSFTNCYKLEQLPE-FDENMKSLRVM 877

Query: 664  HISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE 722
            +++  A+R +P  I YL  LE L L+   N  +LP  I  +  L  +HL   + L   P 
Sbjct: 878  NLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEIHWLKSLEELHLRGCSKLDMFPP 937

Query: 723  LP---------------LCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP- 766
                             L LK  ++ +   L++L  +   LE L+L+G N    LP L  
Sbjct: 938  RSSLNFSQESSYFKLTVLDLKNCNISNSDFLETLSNVCTSLEKLNLSG-NTFSCLPSLQN 996

Query: 767  -LCLQYLNLEDCNMLRSLPELP 787
               L++L L +C  L+++ +LP
Sbjct: 997  FKSLRFLELRNCKFLQNIIKLP 1018


>gi|82542041|gb|ABB82028.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 885

 Score =  332 bits (851), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 260/795 (32%), Positives = 394/795 (49%), Gaps = 118/795 (14%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           ++  V+IVGI GM GIGKTT+AK +F+Q  + FEGSCF S++   S+   GL  LQ+Q+L
Sbjct: 150 ATHDVRIVGIHGMPGIGKTTIAKVVFNQLRYRFEGSCFFSNINETSKQFNGLALLQEQLL 209

Query: 63  STTLSEKLEVAGPNIPH----FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
              L  K +VA  N         KER+RR ++L+V DDV    QL  L+GE   FG GSR
Sbjct: 210 HDIL--KQDVANINCVDRGKVLIKERLRRKRVLVVADDVTRQDQLNALMGERGWFGPGSR 267

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRD   L K      + Y++  L+ +E+F+ F   A ++    ED    S+ VV Y
Sbjct: 268 VIITTRDSSFLHK----ADQTYQIEELKPDESFQLFSWHALRDTKPAEDYIELSKDVVDY 323

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSI 237
             G PL LEV+G+ L  K +  W  V+  L RI      DI   L+ISF+ L    +++ 
Sbjct: 324 CGGIPLALEVMGACLSGKNRDGWKSVIDKLRRIPN---RDIQGKLRISFDALDGEELQNA 380

Query: 238 FLDIACFFEGEDKDFVASILD-----DSESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
           FLDIACFF    K++VA +L      + E D L  L ++SL+ + G  + MHD+L++MGR
Sbjct: 381 FLDIACFFIDRKKEYVAKVLGARCGYNPEVD-LQTLHERSLIKVLGETVTMHDLLRDMGR 439

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           ++VR++S K+PG+R+R+W+ ++   VL+  KGTD +EG+ LD+   +  +L   +F  M 
Sbjct: 440 EVVREKSPKQPGERTRIWNQEDAWNVLEQQKGTDVVEGLALDVRASEAKSLSAGSFAEMK 499

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            L L                      L  + V L      L K+L ++ W   PL+  PS
Sbjct: 500 CLNL----------------------LQINGVHLTGSFKLLSKELMWICWLQCPLKYFPS 537

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           +F   NL  L+++ S +++ W+G+K      +   K L                      
Sbjct: 538 DFTLDNLAVLDMQYSNLKELWKGKKI-----LNRLKIL---------------------- 570

Query: 473 PVTINFSYCVNLIEFPQI-SGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
               N S+  +LI+ P + S  + +L L G S++ EV  SIE LT L  L+L+GC RLK 
Sbjct: 571 ----NLSHSQHLIKTPNLHSSSLEKLILKGCSSLVEVHQSIENLTSLVFLNLKGCWRLKN 626

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
           +      ++SL TL + GC  LE  PE +  ME L ++ +D     +  SS   L     
Sbjct: 627 LPERIGNVKSLKTLNISGCSQLEKLPERMGDMESLTKLLADGIENEQFLSSIGQL----- 681

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALS----NMLRSLDSSHCKGL 646
              + C +L    D+                 S  PSS  +S    N  R L +S  + +
Sbjct: 682 ---KHCRRLSLHGDS-----------------STPPSSSLISTGVLNWKRWLPASFIEWI 721

Query: 647 ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
                   L LS  GL   SD A   +  + + LS+LE L L+GN F  LP+ I  + +L
Sbjct: 722 S----VKHLELSNSGL---SDRATNCV--DFSGLSALEKLDLTGNKFSRLPSGIGFLPKL 772

Query: 707 RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ-----SLPVLPFCLESLDLTGCNMLRS 761
            ++ +E    L S+P+LP  L +L   DCK L+     S P     ++  D       + 
Sbjct: 773 TYLSVEGCKYLVSIPDLPSSLGHLFACDCKSLKRVRIPSEPKKGLFIKLDDSHSLEEFQG 832

Query: 762 LPELPLCLQYLNLED 776
           + +L  C  Y+ ++D
Sbjct: 833 IEDLSNCFWYIRVDD 847


>gi|147853075|emb|CAN83385.1| hypothetical protein VITISV_004581 [Vitis vinifera]
          Length = 1024

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 224/582 (38%), Positives = 323/582 (55%), Gaps = 64/582 (10%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           SD V++VGI GMGGIGKTTLA+AI+ Q S++FE   F+     N      L  L +++LS
Sbjct: 206 SDDVRMVGICGMGGIGKTTLARAIYSQVSNQFEACSFLE--IANDFKEQDLTSLAEKLLS 263

Query: 64  TTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
             L E+ L++ G       K R+   K+L+VLD+VN +  L+ L G  D FGQGSRI+VT
Sbjct: 264 QLLQEENLKIKGSTS---IKARLHSRKVLVVLDNVNNLTILEHLAGNQDWFGQGSRIIVT 320

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TRD+R+L + + +  ++   NG   +EAFE   + + K      DL   SR ++ Y KG 
Sbjct: 321 TRDQRLLIQHKVDYYEVAEFNG---DEAFEFLKHHSLKYELLENDLQELSREIIFYAKGL 377

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L VLGS L    K  W   L  L      EI ++   L++S+++L    K+IFLDIA
Sbjct: 378 PLALRVLGSLLFGMNKDEWRDYLVKLKSTPNIEIQEV---LRLSYDRLDDEEKNIFLDIA 434

Query: 243 CFFEGEDKDFVASILDD---SESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQE 298
           CFF+GEDKD V  IL     S    +  LI+KSL++I+  N L MHD++QEMG+ IVRQE
Sbjct: 435 CFFKGEDKDHVVEILKGCGFSAKCGIKTLINKSLITINFANKLEMHDLIQEMGKGIVRQE 494

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLF 357
             KEP +RSRLW+ ++I  VLK N G++ IEGIFL+LS ++  ++    AF  M  LRL 
Sbjct: 495 CPKEPERRSRLWEHEDIFDVLKRNMGSEKIEGIFLNLSHLEDTLDFTIEAFAGMKKLRLL 554

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYS-----KVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           K Y  K        S+S + + +++     +V+  +   +    LRYL+W  Y L++LP 
Sbjct: 555 KVYNSK--------SISRDFRDTFNNKVNCRVRFAHEFKFCSNDLRYLYWHGYSLKSLPK 606

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           +F PK+LVEL++  S +++ W+G                    K  + L+S         
Sbjct: 607 DFSPKHLVELSMPYSHIKKLWKG-------------------IKVLERLKS--------- 638

Query: 473 PVTINFSYCVNLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
              I+ S+   LI+ P  SG   + RL L G   + +V  S+  L  L  L L+ C  L+
Sbjct: 639 ---IDLSHSKYLIQTPDFSGITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNCTMLR 695

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSD 571
           R+ +S C L+SL T IL GC   E FPE    +E LK +++D
Sbjct: 696 RLPSSTCSLKSLETFILSGCSKFEEFPENFGNLEMLKELHAD 737



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 143/342 (41%), Gaps = 65/342 (19%)

Query: 704  SQLRFIHLEDFNMLQSLPE-------LPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGC 756
            + LR+++   ++ L+SLP+       + L + Y H+   K+ + + VL   L+S+DL+  
Sbjct: 589  NDLRYLYWHGYS-LKSLPKDFSPKHLVELSMPYSHIK--KLWKGIKVLE-RLKSIDLSHS 644

Query: 757  NMLRSLPELP--LCLQYLNLEDC-NMLRSLPELPLC--LQLLTVRNCNRLQSLPEILLCL 811
              L   P+      L+ L LE C N+ +  P L +   L  L+++NC  L+ LP     L
Sbjct: 645  KYLIQTPDFSGITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNCTMLRRLPSSTCSL 704

Query: 812  QELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMA 871
            + L+  +L   SK     +  PE+  +     E    L  +G      + DS   +    
Sbjct: 705  KSLETFILSGCSK----FEEFPENFGN----LEMLKELHADG------IVDSTFGV---- 746

Query: 872  IASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGF 931
                                    V+PGS IPDW   QSS + I   LP + S  N +GF
Sbjct: 747  ------------------------VIPGSRIPDWIRYQSSRNVIEADLPLNWST-NCLGF 781

Query: 932  AFCAVLDSK-KVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILG 990
            A   V   +  V  D + +  V   F    ++  ET       NS + E     D V+L 
Sbjct: 782  ALALVFGGRFPVAYDDWFWARVFLDFGTCRRSF-ETGISFPMENSVFAE----GDHVVLT 836

Query: 991  FKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGLCPVYAN 1032
            F P      P    H  ATF   +   +Y+IKRCGL  +Y N
Sbjct: 837  FAPVQPSLSPHQVIHIKATFAIMSVPNYYEIKRCGLGLMYVN 878


>gi|296089445|emb|CBI39264.3| unnamed protein product [Vitis vinifera]
          Length = 1054

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 302/904 (33%), Positives = 430/904 (47%), Gaps = 139/904 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ V +VGI+G GGIGKTT+AK +++    +F+   F+ +VR   E  G L  LQK++L 
Sbjct: 115 SNKVSMVGIYGTGGIGKTTIAKVVYNDMLDQFKCHSFLENVREKYEDKGDLLQLQKELLC 174

Query: 64  TTLSEKLEVAGPNIPHFTKERVRRM--KLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             L EK  V       F K + +R   K+LIVLDDV    QLK L    + F  GS I+V
Sbjct: 175 DILMEKNLVLRNIDEGFKKIKSKRHSEKVLIVLDDVGCEEQLKFLAPNSECFHPGSIIIV 234

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTR+KR L+ +  +    Y    +  ++A E FC  AFK++H  E+    S  ++ Y  G
Sbjct: 235 TTRNKRCLDVY--DSYSSYEAKRMADKQAEELFCWNAFKQDHPIENFVGLSNRILDYADG 292

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L VLGS L  +    W   L +L  I      +I  +L+IS++ L+   K +FL I
Sbjct: 293 LPLALVVLGSFLFQRPMDEWESTLDELKTI---PPENIQKVLQISYDGLSDERKKLFLYI 349

Query: 242 ACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
           ACFF+ ED+     IL+  +   +  L +L ++ L+SI  N + MHD+LQEMG  IV  +
Sbjct: 350 ACFFKDEDEKMATRILESCKLHPAIGLRVLHERCLISIEDNTIRMHDLLQEMGWAIVCND 409

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG--INLDPRAFTNMSNLRL 356
            E+ PGK SRL + ++I  VL  N+ T  IEGIF   S+  G  I L    F NM+ LRL
Sbjct: 410 PER-PGKWSRLCELQDIESVLSQNEWTKNIEGIFTSQSRHTGKHIQLTTEVFRNMNQLRL 468

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
            K    +F +I                VQL    +     L Y HWD YPL  LPSNF  
Sbjct: 469 LKV---EFNQI----------------VQLSQDFELPCHDLVYFHWDYYPLEYLPSNFHT 509

Query: 417 KNLVELNLRCSKVEQPWEGEKACVP---------------SSIQNFKYLSALSFKGCQSL 461
            NLVELNL CS+++  WEG                     SSI +   L  L+ KGC  L
Sbjct: 510 DNLVELNLWCSRIKHLWEGNMPAKKLKVIDLSYSMHLVDISSISSMPNLETLTLKGCTRL 569

Query: 462 RSFPSNL-HFVCPVTINFSYCVNLIEFPQISGKV---TRLYLGQSAIEEVPSSIECLTDL 517
           +S P N     C  T++   C NL  FP+I  ++    +L L Q+ I  +PSSI  L  L
Sbjct: 570 KSLPRNFPKLECLQTLSCCGCSNLESFPKIEEEMRSLRKLNLSQTGIMGLPSSISKLNGL 629

Query: 518 EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI----LEKMEHLKRIYSDRT 573
           + LDL  CK+L  +  S   L SL TL L  C  L  FP I    L+ +++L   + +  
Sbjct: 630 KELDLSSCKKLSSLPDSIYSLSSLQTLNLFACSRLVGFPGINIGSLKALKYLDLSWCEN- 688

Query: 574 PITELPSSFENLPGLEVLFVEDCSKLDNLPD-NIGSLEYLYYI-LAAASAISQLPSSVAL 631
            +  LP+S  +L  L+ L +  CSKL   PD N GSL+ L  +  +    +  LP S+  
Sbjct: 689 -LESLPNSIGSLSSLQTLLLIGCSKLKGFPDINFGSLKALESLDFSGCRNLESLPVSIYN 747

Query: 632 SNMLRSLDSSHCKGLESF---------------PRTFLLGLSAM---------------- 660
            + L++L  ++C  LE                 P T  +  SA+                
Sbjct: 748 VSSLKTLGITNCPKLEEMLEMKLGVDPCPWPFSPLTCHISNSAIIWDDHWHDCFSSLEAL 807

Query: 661 ----GLLHISDYAVR-------EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
                L  + + +VR       +IP   ++L+SLEIL L GN    +P +++ +      
Sbjct: 808 DSQCPLSSLVELSVRKFYDMEEDIPIGSSHLTSLEILSL-GN----VPTVVEGI------ 856

Query: 710 HLEDFNMLQSLPELPLC------------------LKYLHLIDCKMLQSLPVLPFC---- 747
            L D   L SL +L L                   L+ L L DC +++   +   C    
Sbjct: 857 -LYDIFHLSSLVKLSLTKCKPTEEGIPRDIQNLSPLQQLSLHDCNLMKGTILDHICHLTS 915

Query: 748 LESLDLTGCNMLRSLP---ELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSL 804
           LE L L G N   S+P        L+ L+L  C  L+ +PELP  L+ L     +R+ S 
Sbjct: 916 LEELYL-GWNHFSSIPAGISRLSNLKALDLSHCKKLQQIPELPSSLRFLDAHCPDRISSS 974

Query: 805 PEIL 808
           P +L
Sbjct: 975 PLLL 978


>gi|105922722|gb|ABF81433.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1446

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 257/742 (34%), Positives = 375/742 (50%), Gaps = 96/742 (12%)

Query: 38  SCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGP-NIPHFTKERVRRMKLLIVLDD 96
           SCF+ +VR +     G   LQ+Q+LS  L E+  V          K R R  K+L +LDD
Sbjct: 277 SCFLENVREDFAKKDGPRRLQEQLLSEILMERASVWDSYRGIEMIKRRSRLKKILHILDD 336

Query: 97  VNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCN 156
           V++  QL+    E   FG GSRI++T+RD  VL     ++ KIY    L  ++A   F  
Sbjct: 337 VDDKKQLEFFAAEPGWFGPGSRIIITSRDTNVLTG--NDDTKIYEAEKLNDDDALMLFSQ 394

Query: 157 FAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEI 216
            AFK +   ED    S+ VV Y  G PL +EV+GS L  +    W   ++ +N I + +I
Sbjct: 395 KAFKNDQPDEDFVELSKQVVGYANGLPLAIEVIGSFLYARSIPEWRGAINRMNEIPDGKI 454

Query: 217 HDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSL 273
               D+L+ISF+ L    K IFLDIACF  G   D +  IL+         + +LI++SL
Sbjct: 455 ---IDVLRISFDGLHESDKKIFLDIACFLMGFKIDRITRILESRGFHAGIGIPVLIERSL 511

Query: 274 VSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFL 333
           +S+S + + MH++LQ MG++IVR ES +EPG+RSRLW  +++   L  + G + IE IFL
Sbjct: 512 ISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDSTGKEKIEAIFL 571

Query: 334 DLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYL 393
           D+  IK    +  AF+ MS LRL K                       + VQL  G + L
Sbjct: 572 DMPGIKEAQWNMEAFSKMSKLRLLKI----------------------NNVQLSEGPEDL 609

Query: 394 PKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSAL 453
             KLR+L W +YP ++LP+  +   LVEL++  S++EQ W G K+ V     N K     
Sbjct: 610 SNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSRIEQLWYGCKSAV-----NLK----- 659

Query: 454 SFKGCQSLRSFPSNLHFVCPVTINFSYCVNLI---EFPQISGKVTRLYLGQSAIEEVPSS 510
                                 IN S  +NLI   +F +I      +  G +++ EV  S
Sbjct: 660 ---------------------IINLSNSLNLIKTLDFTRIPNLENLILEGCTSLSEVHPS 698

Query: 511 IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYS 570
           +     LE + L  C  + RI  S  ++ SL   IL GC  LE FP+I+  M  L  ++ 
Sbjct: 699 LARHKKLEYVTLMDCVSI-RILPSNLEMESLKVCILDGCSKLEKFPDIVGNMNKLTVLHL 757

Query: 571 DRTPITELPSSFENLPGLEVLFVEDC------------------------SKLDNLPDNI 606
           D T IT+L SS  +L GLEVL + +C                        S+L N+P N+
Sbjct: 758 DETGITKLSSSIHHLIGLEVLSMNNCKNLESIPSSIRCLKSLKKLDLSGCSELQNIPQNL 817

Query: 607 GSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT----FLLGLSAMGL 662
           G +E L  I  + ++I Q P+S+ L   L+ L    CK +   P       L GL ++ +
Sbjct: 818 GKVEGLEEIDVSGTSIRQPPASIFLLKSLKVLSLDGCKRIAVNPTGDRLPSLSGLCSLEV 877

Query: 663 LHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSL 720
           L +    +RE  +P++I  LSSL+ L LS NNF SLP  I Q+S L  + LED  ML+SL
Sbjct: 878 LDLCACNLREGALPEDIGCLSSLKSLDLSQNNFVSLPESINQLSGLEMLVLEDCRMLESL 937

Query: 721 PELPLCLKYLHLIDCKMLQSLP 742
           PE+P  ++ ++L  C  L+ +P
Sbjct: 938 PEVPSKVQTVNLNGCIRLKEIP 959



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 199/435 (45%), Gaps = 60/435 (13%)

Query: 493  KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
            ++  L++  S IE++    +   +L++++L     L + +  F ++ +L  LIL GC +L
Sbjct: 634  ELVELHMANSRIEQLWYGCKSAVNLKIINLSNSLNLIK-TLDFTRIPNLENLILEGCTSL 692

Query: 553  EHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
                  L + + L+ +   D   I  LPS+ E +  L+V  ++ CSKL+  PD +G++  
Sbjct: 693  SEVHPSLARHKKLEYVTLMDCVSIRILPSNLE-MESLKVCILDGCSKLEKFPDIVGNMNK 751

Query: 612  LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYA 669
            L  +    + I++L SS+     L  L  ++CK LES P +   L  L  + L   S+  
Sbjct: 752  LTVLHLDETGITKLSSSIHHLIGLEVLSMNNCKNLESIPSSIRCLKSLKKLDLSGCSE-- 809

Query: 670  VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP---ELP-- 724
            ++ IPQ +  +  LE + +SG +    PA I  +  L+ + L+    +   P    LP  
Sbjct: 810  LQNIPQNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLKVLSLDGCKRIAVNPTGDRLPSL 869

Query: 725  --LC-LKYLHLIDCKMLQ-SLPVLPFCLESLDLTGC--NMLRSLPE---LPLCLQYLNLE 775
              LC L+ L L  C + + +LP    CL SL       N   SLPE       L+ L LE
Sbjct: 870  SGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSQNNFVSLPESINQLSGLEMLVLE 929

Query: 776  DCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPES 835
            DC ML SLPE+P  +Q + +  C RL+ +P+ +            KLS           S
Sbjct: 930  DCRMLESLPEVPSKVQTVNLNGCIRLKEIPDPI------------KLSS----------S 967

Query: 836  LKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLI 895
             +S  IC    NC  L           ++L      + + R G+ +A+            
Sbjct: 968  KRSEFICL---NCWALYEHNGQDSFGLTMLERYLKGLPNPRPGFGIAV------------ 1012

Query: 896  VLPGSEIPDWFSNQS 910
              PG+EIP WF++Q+
Sbjct: 1013 --PGNEIPGWFNHQN 1025


>gi|357449963|ref|XP_003595258.1| Heat shock protein [Medicago truncatula]
 gi|355484306|gb|AES65509.1| Heat shock protein [Medicago truncatula]
          Length = 1558

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 227/626 (36%), Positives = 331/626 (52%), Gaps = 69/626 (11%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFD-QFSHEFEGSCFVSDVRGNSETAGGLEHLQK 59
           + S +   +VGI+G GG+GK+TLA+A+++ Q S +F+G CF++D+R  S    GL  LQ+
Sbjct: 207 IGSDEGANMVGIYGTGGVGKSTLARAVYNNQLSDQFDGVCFLADIR-ESTIKHGLVQLQE 265

Query: 60  QMLSTTLSEK-LEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            +LS  L EK + V   N      K R++  K+L+VLDD+++  Q++ L G  D FG GS
Sbjct: 266 TLLSEILCEKDIRVGNVNRGISIIKRRLQSKKVLLVLDDIDKAKQIQVLAGGHDWFGSGS 325

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           +I++TTRDK +L    G    +Y V  L  +++ E F  +AFK N+        S+  VS
Sbjct: 326 KIIITTRDKHLL-AINGI-LSLYEVKQLNNKKSLELFNWYAFKNNNVDPCYGDISKRAVS 383

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y  G PL LEV+GS LC +    W   L     I   +IH+    LK+S+N L  + K I
Sbjct: 384 YAGGLPLALEVIGSHLCGRSLCAWKDALDKYEEIPHEDIHET---LKVSYNDLDEKDKGI 440

Query: 238 FLDIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQ 293
           FLDIACFF   +  +V  +L        + +++L DKSL+ I  G  + MHD++Q+MGR+
Sbjct: 441 FLDIACFFNSYEMSYVKEMLYLHGFKAENGIEVLTDKSLMKIDDGGCVRMHDLVQDMGRE 500

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IVRQES  EPGKRSRLW   +I  VL+ N GTD IE I ++L   K +    +AF  M N
Sbjct: 501 IVRQESTLEPGKRSRLWFHDDIIHVLEENTGTDTIEVIIINLCNDKEVRWSGKAFKKMKN 560

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           L++      +F    K P                     LP  LR L W  YP ++LPS+
Sbjct: 561 LKILIIRSARF---SKDPQK-------------------LPNSLRVLDWSGYPSQSLPSD 598

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPS--SIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
           F PKNL+ L+L            ++C+ S   I+ F+ LS L F GC+ L   PS    V
Sbjct: 599 FNPKNLMILSLH-----------ESCLISFKPIKAFESLSFLDFDGCKLLTELPSLSGLV 647

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
               +    C NLI                     + +S+  L  L +L  + C +L+ +
Sbjct: 648 NLWALCLDDCTNLI--------------------TIHNSVGFLNKLVLLSTQRCTQLELL 687

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
             +   L SL TL + GC  L+ FPE+L  M++++ +Y D+T I +LP S + L GL  L
Sbjct: 688 VPTI-NLPSLETLDMRGCSRLKSFPEVLGVMKNIRDVYLDQTSIDKLPFSIQKLVGLRRL 746

Query: 592 FVEDCSKLDNLPDNIGSLEYLYYILA 617
           F+ +C  L  LPD+I +L  L   +A
Sbjct: 747 FLRECLSLTQLPDSIRTLPKLEITMA 772



 Score = 40.4 bits (93), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 79/189 (41%), Gaps = 34/189 (17%)

Query: 666 SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE--L 723
           +D  VR   +    + +L+IL +    F   P   K  + LR +    +   QSLP    
Sbjct: 544 NDKEVRWSGKAFKKMKNLKILIIRSARFSKDPQ--KLPNSLRVLDWSGYPS-QSLPSDFN 600

Query: 724 PLCLKYLHLIDCKMLQSLPVLPF-CLESLDLTGCNMLRSLPELP--LCLQYLNLEDCNML 780
           P  L  L L +  ++   P+  F  L  LD  GC +L  LP L   + L  L L+DC  L
Sbjct: 601 PKNLMILSLHESCLISFKPIKAFESLSFLDFDGCKLLTELPSLSGLVNLWALCLDDCTNL 660

Query: 781 RSL-------------------------PELPL-CLQLLTVRNCNRLQSLPEILLCLQEL 814
            ++                         P + L  L+ L +R C+RL+S PE+L  ++ +
Sbjct: 661 ITIHNSVGFLNKLVLLSTQRCTQLELLVPTINLPSLETLDMRGCSRLKSFPEVLGVMKNI 720

Query: 815 DASVLEKLS 823
               L++ S
Sbjct: 721 RDVYLDQTS 729


>gi|357449443|ref|XP_003594998.1| TMV resistance protein N [Medicago truncatula]
 gi|355484046|gb|AES65249.1| TMV resistance protein N [Medicago truncatula]
          Length = 1179

 Score =  330 bits (846), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 241/715 (33%), Positives = 367/715 (51%), Gaps = 101/715 (14%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           + S+ V+ +G+WGMGGIGKT LAK ++D +  +FE  CF+ +VR  S T  GL+ ++K++
Sbjct: 312 NGSNDVRTLGLWGMGGIGKTALAKKLYDNYCSQFEYHCFLENVREES-TKCGLKVVRKKL 370

Query: 62  LSTTLSEKLEVAGPNIPHFT----KERVRRMKLLIVLDDVNEVGQLKRL-IGELDQFGQG 116
            ST L       G + P+F     K+R+ R K LIVLDDV  + Q + L IG     G G
Sbjct: 371 FSTLLK-----LGHDAPYFENPIFKKRLERAKCLIVLDDVATLEQAENLKIG----LGPG 421

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SR++VTTRD ++  +F G    +  V  L  +E+ + F   AF+E H  E     S+S +
Sbjct: 422 SRVIVTTRDSQICHQFEG--FVVREVKKLNEDESLQLFSCNAFQEKHAKEGYEELSKSAI 479

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            Y +GNPL L+VLG++LC K K  W   L  +  I  + IHD+   LK+SF  L    + 
Sbjct: 480 GYCRGNPLALKVLGANLCAKSKEAWESELEKIKEIPYAGIHDV---LKLSFYDLDRTQRD 536

Query: 237 IFLDIACFFEGE--------DKDFVASILDDSE---SDVLDILIDKSLVSIS-GNFLNMH 284
           IFLDIACFF            ++++  + +  +   +  +++L+ KSL++    + + MH
Sbjct: 537 IFLDIACFFYPTINEFDCYTQREYIIDLFNACKFYPATSIEVLLHKSLMTFGYCDRIQMH 596

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLD 344
           D++ EMGR+IV+QE+ K+PGKRSRLWDP+ I  V K+NKGTDA+E I  D SKI  + L 
Sbjct: 597 DLVVEMGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKGTDAVEVILFDTSKIGDVYLS 656

Query: 345 PRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT 404
            R+F +M NLRL                         + V L  GL++L  KL YLHW++
Sbjct: 657 SRSFESMINLRLLHI------------------ANKCNNVHLQEGLEWLSDKLSYLHWES 698

Query: 405 YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKAC----------------VP--SSIQN 446
           +PL +LPS F P+ LVEL++  SK+ + W+  +                  +P  S   N
Sbjct: 699 FPLESLPSTFCPQKLVELSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPN 758

Query: 447 FKYLS---------------------ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLI 485
            K LS                      L  KGC  + S  +++H    +T++ + C +L+
Sbjct: 759 LKILSLAYCVSLHQLHPSIFSAPKLRELCLKGCTKIESLVTDIHSKSLLTLDLTDCSSLV 818

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
           +F   S ++T L L  + I E  S +   + L+ LDL  CK+L  +       R L +L 
Sbjct: 819 QFCVTSEEMTWLSLRGTTIHEFSSLMLRNSKLDYLDLSDCKKLNFVGKKLSNDRGLESLS 878

Query: 546 LL---GC--LNLEHFPEILEKMEHLKRIY-SDRTPITELPSSFENLPGLEVLFVEDCSKL 599
           +L   GC  +N      IL+    L+ +Y  +   +  LP + +N   L  L ++ C  L
Sbjct: 879 ILNLSGCTQINTLSMSFILDGARSLEFLYLRNCCNLETLPDNIQNCLMLSFLELDGCINL 938

Query: 600 DNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
           ++LP    SLE L     +A   + L ++     ML+++      G E FP  FL
Sbjct: 939 NSLPKLPASLEDL-----SAINCTYLDTNSIQREMLKNMLYRFRFG-EPFPEYFL 987



 Score = 43.9 bits (102), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 143/359 (39%), Gaps = 48/359 (13%)

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
           E P+  GK +RL+     I EV    +    +EV+ L    ++  +  S     S++ L 
Sbjct: 610 EAPKDPGKRSRLW-DPELIYEVFKYNKGTDAVEVI-LFDTSKIGDVYLSSRSFESMINLR 667

Query: 546 LL----GCLNLEHFPEILEKM-EHLKRIYSDRTPITELPSSF------------------ 582
           LL     C N+ H  E LE + + L  ++ +  P+  LPS+F                  
Sbjct: 668 LLHIANKCNNV-HLQEGLEWLSDKLSYLHWESFPLESLPSTFCPQKLVELSMTHSKLRKL 726

Query: 583 ----ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSL 638
               + L  L ++ +++   L  +PD   +       LA   ++ QL  S+  +  LR L
Sbjct: 727 WDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKILSLAYCVSLHQLHPSIFSAPKLREL 786

Query: 639 DSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPA 698
               C  +ES     +  + +  LL +       + Q       +  L L G       +
Sbjct: 787 CLKGCTKIESL----VTDIHSKSLLTLDLTDCSSLVQFCVTSEEMTWLSLRGTTIHEFSS 842

Query: 699 IIKQMSQLRFIHLEDFNMLQ------SLPELPLCLKYLHLIDCKMLQSLPVL-----PFC 747
           ++ + S+L ++ L D   L       S       L  L+L  C  + +L +         
Sbjct: 843 LMLRNSKLDYLDLSDCKKLNFVGKKLSNDRGLESLSILNLSGCTQINTLSMSFILDGARS 902

Query: 748 LESLDLTGCNMLRSLP---ELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQS 803
           LE L L  C  L +LP   +  L L +L L+ C  L SLP+LP  L+ L+  NC  L +
Sbjct: 903 LEFLYLRNCCNLETLPDNIQNCLMLSFLELDGCINLNSLPKLPASLEDLSAINCTYLDT 961


>gi|449486541|ref|XP_004157327.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1248

 Score =  330 bits (846), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 280/870 (32%), Positives = 425/870 (48%), Gaps = 119/870 (13%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            D  D V +VGI GMGGIGKTTLAKA++++ +++FE  CF+S+VR   E    L  LQ+++
Sbjct: 215  DVPDGVNMVGIHGMGGIGKTTLAKALYNKIAYQFEACCFLSNVRETLEQFKDLVQLQEKL 274

Query: 62   LSTTLSEKLEVAGPNI---PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            LS  L +     G N+    +  ++R+   K+LI+LDDV++  QL  L+GE D FG+GS+
Sbjct: 275  LSEILKDNAWKVG-NVHKGKNIIRDRLCSKKVLIILDDVDKDEQLDALVGERDWFGRGSK 333

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            I+ TTRD+ +LE    +   +Y +  L+ +++ E F   AFK+NH   +    S+  VSY
Sbjct: 334  IIATTRDRHLLENHSFD--IVYPIQLLDPKKSLELFSLHAFKQNHPSSNYVDLSKFAVSY 391

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             KG PL L +LGS L  + +  W   LH+L    E  +  ++   +I F +L  RVK IF
Sbjct: 392  CKGLPLALVILGSLLHKRERKIWKSKLHELENSLEPSVEAVF---QIGFKELHERVKEIF 448

Query: 239  LDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
            LDI+CFF GED ++   +L   D   D  + IL+D SLV++    + MHD++Q+MG+ IV
Sbjct: 449  LDISCFFVGEDINYSKDVLKACDLNPDYGIIILMDLSLVTVEDGKIQMHDLIQQMGQTIV 508

Query: 296  RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINL-DPRAFTNMSNL 354
            R ES  EP KRSRLW+ +   ++LK   GT A++ I LDL     + + +  AF NM NL
Sbjct: 509  RHES-FEPAKRSRLWEAEGAIKILKEKSGTKAVKAIKLDLHYKPWLKIVEAEAFRNMKNL 567

Query: 355  RLFKF----YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
            RL       Y PK                        N  +YLP  L+++ W T+ +   
Sbjct: 568  RLLILQRVAYFPK------------------------NIFEYLPNSLKWIEWSTFYVNQS 603

Query: 411  PS-NFKPKN-LVELNLRCSKVEQPWEGEKAC----------------------------- 439
             S +F  K  LV L ++    +QP    + C                             
Sbjct: 604  SSISFSVKGRLVGLVMKGVVNKQPRIAFENCKTMKHVDLSYCGTLKETPNFSATLNLEKL 663

Query: 440  ----------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI-NFSYCVNLIEFP 488
                      +  S+ +   L  L  +GC +L  FPS+   +  + + N S C  + E P
Sbjct: 664  YLRGCTSLKVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIP 723

Query: 489  QISG--KVTRLYLGQ-SAIEEVPSSI-ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
             +S    +  LYL +   +  +  SI   L  L +LDL GCK L+R+     KL SL  L
Sbjct: 724  DLSASSNLKELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLERLPIYTNKLESLELL 783

Query: 545  ILLGCLNLE--------HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
             L  CL LE         FP  L K + LK +        E  + F     LE+L +  C
Sbjct: 784  NLASCLKLETFFDSSFRKFPSHL-KFKSLKVLNLRDCLNLEEITDFSMASNLEILDLNTC 842

Query: 597  SKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
              L  + ++IGSL+ L  + L     + +LPSS+ L + L SL  ++C  LE  P  F  
Sbjct: 843  FSLRIIHESIGSLDKLITLQLDLCHNLEKLPSSLKLKS-LDSLSFTNCYKLEQLPE-FDE 900

Query: 656  GLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDF 714
             + ++ +++++  A+R +P  I YL  LE L L+   N  +LP  I  +  L  +HL   
Sbjct: 901  NMKSLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEIHWLKSLEELHLRGC 960

Query: 715  NMLQSLPELP---------------LCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNML 759
            + L   P                  L LK  ++ +   L++L  +   LE L+L+G N  
Sbjct: 961  SKLDMFPPRSSLNFSQESSYFKLTVLDLKNCNISNSDFLETLSNVCTSLEKLNLSG-NTF 1019

Query: 760  RSLPELP--LCLQYLNLEDCNMLRSLPELP 787
              LP L     L++L L +C  L+++ +LP
Sbjct: 1020 SCLPSLQNFKSLRFLELRNCKFLQNIIKLP 1049


>gi|357468511|ref|XP_003604540.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505595|gb|AES86737.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1100

 Score =  330 bits (846), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 217/577 (37%), Positives = 310/577 (53%), Gaps = 43/577 (7%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V+++GIWGM GIGKTT+A+ IF+Q   E++G CF++ V        G+E L++ + +
Sbjct: 282 SQKVRVIGIWGMPGIGKTTIAEEIFNQNRSEYDGCCFLAKV-SEKLKLHGIESLKETLFT 340

Query: 64  TTLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
             L+E +++  PN +    + R+ RMK+LI+LDDV +  QL+ L   LD F   SRI++T
Sbjct: 341 KILAEDVKIDTPNRLSSDIERRIGRMKVLIILDDVKDEDQLEMLFETLDWFQSDSRIILT 400

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            RDK+VL     ++   Y V  L+  +A   F   AFK++H   + +  S+ VV+Y KGN
Sbjct: 401 ARDKQVLFDNEVDDDDRYEVGVLDSSDALALFNLNAFKQSHLETEFDEISKRVVNYAKGN 460

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PLVL+VL   L  K K  W   L  L R+   ++HD+   +K+S++ L    K  FLDIA
Sbjct: 461 PLVLKVLAHMLRGKNKEVWESQLDKLKRLPVKKVHDV---VKLSYDDLDRLEKKYFLDIA 517

Query: 243 CFFEGED--KDFVASILDDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEMGRQI 294
           CFF G     D++  +L D E D      ++ L DK+L++IS  N ++MHDILQEMGR++
Sbjct: 518 CFFNGLSLKVDYMKLLLKDCEGDNSVAVGIERLKDKALITISEDNVISMHDILQEMGREV 577

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VRQES + P KRSRLWD  EI  VLK++KGTDAI  I L+LS I+ + L P  F  M+NL
Sbjct: 578 VRQESSEYPNKRSRLWDHDEICDVLKNDKGTDAIRSICLNLSAIRKLKLSPDVFAKMTNL 637

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           +   FY    ++   L               LP GL   P  LRYLHW  YPL +LP  F
Sbjct: 638 KFLDFYGGYNHDCLDL---------------LPQGLQPFPTDLRYLHWVHYPLESLPKKF 682

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             + LV L+L  S VE+ W G        +Q+   L  ++    + L+  P     +   
Sbjct: 683 SAEKLVILDLSYSLVEKLWCG--------VQDLINLKEVTLSFSEDLKELPDFSKAINLK 734

Query: 475 TINFSYCVNLIEF-PQISG-----KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
            +N   C  L    P I        +  L L +  I  +PSS  C + LE L LRG  ++
Sbjct: 735 VLNIQRCYMLTSVHPSIFSLDKLENIVELDLSRCPINALPSSFGCQSKLETLVLRGT-QI 793

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHL 565
           + I +S   L  L  L +  C  L   PE+   +E L
Sbjct: 794 ESIPSSIKDLTRLRKLDISDCSELLALPELPSSLETL 830



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 153/342 (44%), Gaps = 76/342 (22%)

Query: 644 KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
           +GL+ FP       + +  LH   Y +  +P++ +    L IL LS +  E L   ++ +
Sbjct: 656 QGLQPFP-------TDLRYLHWVHYPLESLPKKFS-AEKLVILDLSYSLVEKLWCGVQDL 707

Query: 704 SQLRFIHLEDFNMLQSLPEL--PLCLKYLHLIDCKMLQSLPVLPFCLESL------DLTG 755
             L+ + L     L+ LP+    + LK L++  C ML S+    F L+ L      DL+ 
Sbjct: 708 INLKEVTLSFSEDLKELPDFSKAINLKVLNIQRCYMLTSVHPSIFSLDKLENIVELDLSR 767

Query: 756 CNMLRSLPELPLC--------------------------LQYLNLEDCNMLRSLPELPLC 789
           C  + +LP    C                          L+ L++ DC+ L +LPELP  
Sbjct: 768 CP-INALPSSFGCQSKLETLVLRGTQIESIPSSIKDLTRLRKLDISDCSELLALPELPSS 826

Query: 790 LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCL 849
           L+ L V +C  L+S+           ++V E+L ++   +              EF NC 
Sbjct: 827 LETLLV-DCVSLKSVF--------FPSTVAEQLKENKKRI--------------EFWNCF 863

Query: 850 KLNGKANNKI---LADSLLRIRHMAIASLRLG-YEMAINEK-LSELRGSLIVLPGSEIPD 904
           KL+ ++   I   L  +L+   +  +++L     E  ++ K + +   ++ V PGS +P+
Sbjct: 864 KLDERSLINIGLNLQINLMEFAYQHLSTLEHDKVESYVDYKDILDSYQAVYVYPGSSVPE 923

Query: 905 WFSNQSSGSSICIQL-PPHSSCRNLIGFAFCAVL--DSKKVD 943
           W   +++ + + + L PPH S   L+GF FC +L  DSK  D
Sbjct: 924 WLEYKTTKNDMIVDLSPPHLS--PLLGFVFCFILAEDSKYCD 963



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 15/231 (6%)

Query: 520 LDLRGCKRLKRISTSFCKLRSLVTLILLGCLN---LEHFPEILEKM-EHLKRIYSDRTPI 575
           L+L   ++LK     F K+ +L  L   G  N   L+  P+ L+     L+ ++    P+
Sbjct: 616 LNLSAIRKLKLSPDVFAKMTNLKFLDFYGGYNHDCLDLLPQGLQPFPTDLRYLHWVHYPL 675

Query: 576 TELPSSF--ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALS 632
             LP  F  E L  L++ +    S ++ L   +  L  L  + L+ +  + +LP      
Sbjct: 676 ESLPKKFSAEKLVILDLSY----SLVEKLWCGVQDLINLKEVTLSFSEDLKELPDFSKAI 731

Query: 633 NMLRSLDSSHCKGLESF-PRTFLLG-LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
           N L+ L+   C  L S  P  F L  L  +  L +S   +  +P      S LE L L G
Sbjct: 732 N-LKVLNIQRCYMLTSVHPSIFSLDKLENIVELDLSRCPINALPSSFGCQSKLETLVLRG 790

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
              ES+P+ IK +++LR + + D + L +LPELP  L+ L L+DC  L+S+
Sbjct: 791 TQIESIPSSIKDLTRLRKLDISDCSELLALPELPSSLETL-LVDCVSLKSV 840


>gi|147858652|emb|CAN82538.1| hypothetical protein VITISV_004290 [Vitis vinifera]
          Length = 1241

 Score =  330 bits (846), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 237/625 (37%), Positives = 333/625 (53%), Gaps = 91/625 (14%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V++VGIWGMGGIGKTTLA+AI++Q S +FEG CF+ +V      + G ++L+K++LS  L
Sbjct: 276 VRMVGIWGMGGIGKTTLARAIYEQISGQFEGCCFLPNVE--HLASKGDDYLRKELLSKVL 333

Query: 67  SEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
            +K ++V   ++    K R    K+LIV+D+VN    LK L+GELD FG  SRI++TTRD
Sbjct: 334 RDKNIDVTITSV----KARFHSKKVLIVIDNVNHRSILKTLVGELDWFGPQSRIIITTRD 389

Query: 126 KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVSYTKGNPL 184
           K VL    G +  IY V  L+ ++A E F + AF  NH P ED+   S+ V++Y +G PL
Sbjct: 390 KHVL-TMHGVDV-IYEVQKLQDDKAIELFNHHAFI-NHPPTEDVMELSQRVIAYAQGLPL 446

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            LEVLGSSLC K K  W   L+ L +I + EI     +L+ SF++L    K+IFLDIA F
Sbjct: 447 ALEVLGSSLCKKSKDEWECALNKLEKIPDMEIR---KVLQTSFDELDDDQKNIFLDIAIF 503

Query: 245 FEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F   ++DF   +L+    S    +  LIDKSL+    + L+MHD+L EMG++IVR+ S K
Sbjct: 504 FNEVEEDFTTEMLNSFGFSAISGIRTLIDKSLIXNLDDELHMHDLLIEMGKEIVRRTSPK 563

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
           EPGKR+RLW+ ++I        GTD +E I  +LS +K I     AF NMS LRL   + 
Sbjct: 564 EPGKRTRLWEQQDICH------GTDEVEVIDFNLSGLKEICFTTEAFGNMSKLRLLAIHE 617

Query: 362 PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVE 421
                           +L   +V + +   +   +LR L W+ YPL++LPS+FK +NLV 
Sbjct: 618 -----SSXSDDSECSSRLMQCQVHISDDFKFHYDELRXLXWEEYPLKSLPSDFKSQNLVF 672

Query: 422 LNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC 481
           L++  S + + WEG +         FK L  +     + L   P           +FS  
Sbjct: 673 LSMTKSHLTRLWEGNRV--------FKNLKYIDLSDSKYLAETP-----------DFSRV 713

Query: 482 VNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSL 541
            NL                    EE+PSSI   T L VLDL+ C++L  + +S CKL  L
Sbjct: 714 XNLKXL---------------XFEELPSSIAYATKLVVLDLQNCEKLLSLPSSICKLAHL 758

Query: 542 VTLILLGCL----------NLEHFPEILEKMEHLKRIY----SDRTPITELPSSFENLPG 587
            TL L GC           NL+  P IL+++ HL+ +          +  LPSS E    
Sbjct: 759 ETLSLSGCSRLGKPQVNSDNLDALPRILDRLSHLRELQLQDCRSLRALPPLPSSME---- 814

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYL 612
                      L N  DN  SLEY+
Sbjct: 815 -----------LINASDNCTSLEYI 828



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 169/431 (39%), Gaps = 96/431 (22%)

Query: 663  LHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP- 721
            L   +Y ++ +P +     +L  L ++ ++   L    +    L++I L D   L   P 
Sbjct: 651  LXWEEYPLKSLPSDFKS-QNLVFLSMTKSHLTRLWEGNRVFKNLKYIDLSDSKYLAETPD 709

Query: 722  -------------ELPLCLKY------LHLIDCKMLQSLPVLPFC----LESLDLTGCNM 758
                         ELP  + Y      L L +C+ L SLP    C    LE+L L+GC+ 
Sbjct: 710  FSRVXNLKXLXFEELPSSIAYATKLVVLDLQNCEKLLSLPS-SICKLAHLETLSLSGCSR 768

Query: 759  L-------RSLPELPLCL------QYLNLEDCNMLRSLPELPLCLQLLTVR-NCNRLQSL 804
            L        +L  LP  L      + L L+DC  LR+LP LP  ++L+    NC  L+ +
Sbjct: 769  LGKPQVNSDNLDALPRILDRLSHLRELQLQDCRSLRALPPLPSSMELINASDNCTSLEYI 828

Query: 805  PEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFE---FTNCLKLNGKANNKILA 861
                                          S +S  +CF    F NC +L  K  +K + 
Sbjct: 829  ------------------------------SPQSVFLCFGGSIFGNCFQLT-KYQSK-MG 856

Query: 862  DSLLRIRHMAIASLRLGYEMAINEKLSELRGSL-IVLPGSEIPDWFSNQSSGSSICIQLP 920
              L R   MA    +  ++ A +++   ++     V PGS IPDWF + S G  + I + 
Sbjct: 857  PHLXR---MATHFDQDRWKSAYDQQYPNVQVPFSTVFPGSTIPDWFMHYSKGHEVDIDVD 913

Query: 921  PHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYI-- 978
            P     + +GFA  AV+  K  D    R +      DL           +    S ++  
Sbjct: 914  PDWYDSSFLGFALSAVIAPK--DGSITRGWSTYCNLDLHDLNSESESESESESESSWVCS 971

Query: 979  ----------EDLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGLCP 1028
                      +  I+SD + L + P   +GF D     I  F F   RK   +K  G+CP
Sbjct: 972  FTDARTCQLEDTTINSDHLWLAYVPSF-LGFNDKKWSRIK-FSFSTSRKSCIVKHWGVCP 1029

Query: 1029 VYANPSETKDN 1039
            +Y   S + DN
Sbjct: 1030 LYIEGS-SDDN 1039



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 14/117 (11%)

Query: 624 QLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSL 683
           +LPSS+A +  L  LD  +C+ L S P + +  L+ +  L +S  +    PQ        
Sbjct: 723 ELPSSIAYATKLVVLDLQNCEKLLSLPSS-ICKLAHLETLSLSGCSRLGKPQ-------- 773

Query: 684 EILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID-CKMLQ 739
               ++ +N ++LP I+ ++S LR + L+D   L++LP LP  ++ ++  D C  L+
Sbjct: 774 ----VNSDNLDALPRILDRLSHLRELQLQDCRSLRALPPLPSSMELINASDNCTSLE 826


>gi|37574597|gb|AAQ93075.1| TIR-NBS-LRR type R protein 7 [Malus baccata]
          Length = 1095

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 247/742 (33%), Positives = 374/742 (50%), Gaps = 111/742 (14%)

Query: 6   TVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTT 65
            V +VGIWGMGG+GKTT AKAI++Q  HEF+   F+ DV GN+ +  GL +LQK+++   
Sbjct: 233 NVIMVGIWGMGGLGKTTAAKAIYNQIHHEFQFKSFLPDV-GNAASKHGLVYLQKELIYDI 291

Query: 66  LSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
           L  K +++  +      +++ R  ++L+++D+++EVGQL  ++G  D FG GSRI++TTR
Sbjct: 292 LKTKSKISSVDEGIGLIEDQFRHRRVLVIMDNIDEVGQLDAIVGNPDWFGPGSRIIITTR 351

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           D+ +L++      K Y    L+  EA E F   AF  N   E+    S  VVSY  G PL
Sbjct: 352 DEHLLKQV----DKTYVAQKLDEREALELFSWHAFGNNWPNEEYLELSEKVVSYCGGLPL 407

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            LEVLGS L  +  + W   L  L R  E +I      L+ISF  L    K+IFLDI+CF
Sbjct: 408 ALEVLGSFLFKRPIAEWKSQLEKLKRTPEGKI---IKSLRISFEGLDDAQKAIFLDISCF 464

Query: 245 FEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F GEDKD+VA +LD      +  + +L ++ LV++  N LNMHD+L+EM + I+ ++S  
Sbjct: 465 FIGEDKDYVAKVLDGCGFYATIGISVLRERCLVTVEHNKLNMHDLLREMAKVIISEKSPG 524

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
           +PGK SRLWD +E+  VL +  GT+ +EG+ L             AF N+  LRL     
Sbjct: 525 DPGKWSRLWDKREVINVLTNKSGTEEVEGLALPWGYRHDTAFSTEAFANLKKLRL----- 579

Query: 362 PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN-FKPKNLV 420
                            L   +V+L     +LPK+L +LHW   PL+++P + F    LV
Sbjct: 580 -----------------LQLCRVELNGEYKHLPKELIWLHWFECPLKSIPDDFFNQDKLV 622

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
            L ++ SK+ Q WEG K     S+ N K    L     +SL+  P           +FS 
Sbjct: 623 VLEMQWSKLVQVWEGSK-----SLHNLK---TLDLSESRSLQKSP-----------DFSQ 663

Query: 481 CVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS 540
             NL E    + K          + E+  SI  L  L +++L  C +L  +   F K +S
Sbjct: 664 VPNLEELILYNCK---------ELSEIHPSIGHLKRLSLVNLEWCDKLISLPGDFYKSKS 714

Query: 541 LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
           +  L+L GCL L    E + +M  L+ + ++ T I E+P S   L  L  L         
Sbjct: 715 VEALLLNGCLILRELHEDIGEMISLRTLEAEYTDIREVPPSIVRLKNLTRL--------- 765

Query: 601 NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAM 660
               ++ S+E ++           LP S+   N LR L+      L SF           
Sbjct: 766 ----SLSSVESIH-----------LPHSLHGLNSLRELN------LSSF----------- 793

Query: 661 GLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSL 720
                 + A  EIP+++  L SL+ L L  N+F +LP+ +  +S+L  + L     L+++
Sbjct: 794 ------ELADDEIPKDLGSLISLQDLNLQRNDFHTLPS-LSGLSKLETLRLHHCEQLRTI 846

Query: 721 PELPLCLKYLHLIDCKMLQSLP 742
            +LP  LK+L    C  L+++P
Sbjct: 847 TDLPTNLKFLLANGCPALETMP 868



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 97/233 (41%), Gaps = 34/233 (14%)

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
           F  +P LE L + +C +L  +  +IG L+ L                 +L N+       
Sbjct: 661 FSQVPNLEELILYNCKELSEIHPSIGHLKRL-----------------SLVNL------E 697

Query: 642 HCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAII- 700
            C  L S P  F    S   LL      +RE+ ++I  + SL  L     +   +P  I 
Sbjct: 698 WCDKLISLPGDFYKSKSVEALLLNGCLILRELHEDIGEMISLRTLEAEYTDIREVPPSIV 757

Query: 701 --KQMSQLRFIHLEDFNMLQSLPEL----PLCLKYLHLIDCKMLQSLPVLPFCLESLDLT 754
             K +++L    +E  ++  SL  L     L L    L D ++ + L  L   L+ L+L 
Sbjct: 758 RLKNLTRLSLSSVESIHLPHSLHGLNSLRELNLSSFELADDEIPKDLGSL-ISLQDLNLQ 816

Query: 755 GCNMLRSLPELPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLP 805
             N   +LP L     L+ L L  C  LR++ +LP  L+ L    C  L+++P
Sbjct: 817 -RNDFHTLPSLSGLSKLETLRLHHCEQLRTITDLPTNLKFLLANGCPALETMP 868


>gi|124360568|gb|ABD33387.2| TIR [Medicago truncatula]
          Length = 1208

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 241/715 (33%), Positives = 367/715 (51%), Gaps = 101/715 (14%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            + S+ V+ +G+WGMGGIGKT LAK ++D +  +FE  CF+ +VR  S T  GL+ ++K++
Sbjct: 341  NGSNDVRTLGLWGMGGIGKTALAKKLYDNYCSQFEYHCFLENVREES-TKCGLKVVRKKL 399

Query: 62   LSTTLSEKLEVAGPNIPHFT----KERVRRMKLLIVLDDVNEVGQLKRL-IGELDQFGQG 116
             ST L       G + P+F     K+R+ R K LIVLDDV  + Q + L IG     G G
Sbjct: 400  FSTLLK-----LGHDAPYFENPIFKKRLERAKCLIVLDDVATLEQAENLKIG----LGPG 450

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SR++VTTRD ++  +F G    +  V  L  +E+ + F   AF+E H  E     S+S +
Sbjct: 451  SRVIVTTRDSQICHQFEG--FVVREVKKLNEDESLQLFSCNAFQEKHAKEGYEELSKSAI 508

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
             Y +GNPL L+VLG++LC K K  W   L  +  I  + IHD+   LK+SF  L    + 
Sbjct: 509  GYCRGNPLALKVLGANLCAKSKEAWESELEKIKEIPYAGIHDV---LKLSFYDLDRTQRD 565

Query: 237  IFLDIACFFEGE--------DKDFVASILDDSE---SDVLDILIDKSLVSIS-GNFLNMH 284
            IFLDIACFF            ++++  + +  +   +  +++L+ KSL++    + + MH
Sbjct: 566  IFLDIACFFYPTINEFDCYTQREYIIDLFNACKFYPATSIEVLLHKSLMTFGYCDRIQMH 625

Query: 285  DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLD 344
            D++ EMGR+IV+QE+ K+PGKRSRLWDP+ I  V K+NKGTDA+E I  D SKI  + L 
Sbjct: 626  DLVVEMGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKGTDAVEVILFDTSKIGDVYLS 685

Query: 345  PRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT 404
             R+F +M NLRL                         + V L  GL++L  KL YLHW++
Sbjct: 686  SRSFESMINLRLLHI------------------ANKCNNVHLQEGLEWLSDKLSYLHWES 727

Query: 405  YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKAC----------------VP--SSIQN 446
            +PL +LPS F P+ LVEL++  SK+ + W+  +                  +P  S   N
Sbjct: 728  FPLESLPSTFCPQKLVELSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPN 787

Query: 447  FKYLS---------------------ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLI 485
             K LS                      L  KGC  + S  +++H    +T++ + C +L+
Sbjct: 788  LKILSLAYCVSLHQLHPSIFSAPKLRELCLKGCTKIESLVTDIHSKSLLTLDLTDCSSLV 847

Query: 486  EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
            +F   S ++T L L  + I E  S +   + L+ LDL  CK+L  +       R L +L 
Sbjct: 848  QFCVTSEEMTWLSLRGTTIHEFSSLMLRNSKLDYLDLSDCKKLNFVGKKLSNDRGLESLS 907

Query: 546  LL---GC--LNLEHFPEILEKMEHLKRIY-SDRTPITELPSSFENLPGLEVLFVEDCSKL 599
            +L   GC  +N      IL+    L+ +Y  +   +  LP + +N   L  L ++ C  L
Sbjct: 908  ILNLSGCTQINTLSMSFILDGARSLEFLYLRNCCNLETLPDNIQNCLMLSFLELDGCINL 967

Query: 600  DNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
            ++LP    SLE L     +A   + L ++     ML+++      G E FP  FL
Sbjct: 968  NSLPKLPASLEDL-----SAINCTYLDTNSIQREMLKNMLYRFRFG-EPFPEYFL 1016



 Score = 43.9 bits (102), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 143/359 (39%), Gaps = 48/359 (13%)

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
           E P+  GK +RL+     I EV    +    +EV+ L    ++  +  S     S++ L 
Sbjct: 639 EAPKDPGKRSRLW-DPELIYEVFKYNKGTDAVEVI-LFDTSKIGDVYLSSRSFESMINLR 696

Query: 546 LL----GCLNLEHFPEILEKM-EHLKRIYSDRTPITELPSSF------------------ 582
           LL     C N+ H  E LE + + L  ++ +  P+  LPS+F                  
Sbjct: 697 LLHIANKCNNV-HLQEGLEWLSDKLSYLHWESFPLESLPSTFCPQKLVELSMTHSKLRKL 755

Query: 583 ----ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSL 638
               + L  L ++ +++   L  +PD   +       LA   ++ QL  S+  +  LR L
Sbjct: 756 WDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKILSLAYCVSLHQLHPSIFSAPKLREL 815

Query: 639 DSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPA 698
               C  +ES     +  + +  LL +       + Q       +  L L G       +
Sbjct: 816 CLKGCTKIESL----VTDIHSKSLLTLDLTDCSSLVQFCVTSEEMTWLSLRGTTIHEFSS 871

Query: 699 IIKQMSQLRFIHLEDFNMLQ------SLPELPLCLKYLHLIDCKMLQSLPVL-----PFC 747
           ++ + S+L ++ L D   L       S       L  L+L  C  + +L +         
Sbjct: 872 LMLRNSKLDYLDLSDCKKLNFVGKKLSNDRGLESLSILNLSGCTQINTLSMSFILDGARS 931

Query: 748 LESLDLTGCNMLRSLP---ELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQS 803
           LE L L  C  L +LP   +  L L +L L+ C  L SLP+LP  L+ L+  NC  L +
Sbjct: 932 LEFLYLRNCCNLETLPDNIQNCLMLSFLELDGCINLNSLPKLPASLEDLSAINCTYLDT 990


>gi|30692996|ref|NP_198509.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332006745|gb|AED94128.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1188

 Score =  329 bits (844), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 277/788 (35%), Positives = 395/788 (50%), Gaps = 109/788 (13%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            SD V+++ I+GMGGIGKTTLAK  F++FSH FEGS F+ + R  S+   G  HLQ Q+L
Sbjct: 205 GSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLENFREYSKKPEGRTHLQHQLL 264

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
           S  L    ++    + H  KER R  ++L+V+DDV++V QL     + D FG GSRI++T
Sbjct: 265 SDILRRN-DIEFKGLDHAVKERFRSKRVLLVVDDVDDVHQLNSAAIDRDCFGHGSRIIIT 323

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TR+  +L++ R E    Y    L+ +E+ E F   AF+ +  P++   HS  VV+Y  G 
Sbjct: 324 TRNMHLLKQLRAEGS--YSPKELDGDESLELFSWHAFRTSEPPKEFLQHSEEVVTYCAGL 381

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL +EVLG+ L  +    W   L  L RI    I      L+ISFN LT   K +FLDIA
Sbjct: 382 PLAVEVLGAFLIERSIREWESTLKLLKRIPNDNIQAK---LQISFNALTIEQKDVFLDIA 438

Query: 243 CFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
           CFF G D  +VA ILD        VL +L+++ L++ISGN + MHD+L++MGRQIVR+ S
Sbjct: 439 CFFIGVDSYYVACILDGCNLYPDIVLSLLMERCLITISGNNIMMHDLLRDMGRQIVREIS 498

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
            K+ G+RSRLW   ++  VLK   GT+AIEG+ L    +     +  AF  M  LRL   
Sbjct: 499 PKKCGERSRLWSHNDVVGVLKKKSGTNAIEGLSLKADVMDFQYFEVEAFAKMQELRLL-- 556

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
                             +L Y  V L    ++ PK LR+L W  + L   P N   ++L
Sbjct: 557 ------------------ELRY--VDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESL 596

Query: 420 VELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
             L+L+ S +++ W+ +    P+++  +  LS   +     LR  P           +FS
Sbjct: 597 AALDLQYSNLKRFWKAQSPPQPANMVKYLDLSHSVY-----LRETP-----------DFS 640

Query: 480 YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECL-TDLEVLDLRGCKRLKRISTSFCKL 538
           Y  N+ +   I+ K   L         V  SI  L   L +L+L  C  L  +     KL
Sbjct: 641 YFPNVEKLILINCKSLVL---------VHKSIGILDKKLVLLNLSSCIELDVLPEEIYKL 691

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
           +SL +L L  C  LE   + L ++E L  + +D T + E+PS+   L  L+ L +  C  
Sbjct: 692 KSLESLFLSNCSKLERLDDALGELESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKG 751

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
           L  L D+I +L             S+   SV+L   LR +  S   GL     T++  LS
Sbjct: 752 L--LSDDIDNL------------YSEKSHSVSL---LRPVSLS---GL-----TYMRILS 786

Query: 659 AMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
            +G  ++SD     IP++I  LS L  L L GN+F +LP               DF  L 
Sbjct: 787 -LGYCNLSD---ELIPEDIGSLSFLRDLDLRGNSFCNLPT--------------DFATLP 828

Query: 719 SLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC--LQYLNLED 776
           +L EL L        DC  LQS+  LP  L  LD+  C ML+  P++  C  L  L L D
Sbjct: 829 NLGELLLS-------DCSKLQSILSLPRSLLFLDVGKCIMLKRTPDISKCSALFKLQLND 881

Query: 777 CNMLRSLP 784
           C  L  +P
Sbjct: 882 CISLFEIP 889



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 122/292 (41%), Gaps = 42/292 (14%)

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTP-----------------ITELPSSFENLPGLEVLF 592
           L+LE    +  +  +LKR +  ++P                 + E P  F   P +E L 
Sbjct: 591 LSLESLAALDLQYSNLKRFWKAQSPPQPANMVKYLDLSHSVYLRETPD-FSYFPNVEKLI 649

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAI--SQLPSSVALSNMLRSLDSSHCKGLESFP 650
           + +C  L  +  +IG L+    +L  +S I    LP  +     L SL  S+C  LE   
Sbjct: 650 LINCKSLVLVHKSIGILDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLD 709

Query: 651 RTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG---------NNFESLPAIIK 701
              L  L ++  L     A+REIP  I  L  L+ L L+G         +N  S  +   
Sbjct: 710 DA-LGELESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKGLLSDDIDNLYSEKS--H 766

Query: 702 QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTG---CNM 758
            +S LR + L     ++ L      L Y +L D  + + +  L F L  LDL G   CN+
Sbjct: 767 SVSLLRPVSLSGLTYMRILS-----LGYCNLSDELIPEDIGSLSF-LRDLDLRGNSFCNL 820

Query: 759 LRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
                 LP  L  L L DC+ L+S+  LP  L  L V  C  L+  P+I  C
Sbjct: 821 PTDFATLP-NLGELLLSDCSKLQSILSLPRSLLFLDVGKCIMLKRTPDISKC 871


>gi|357513917|ref|XP_003627247.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521269|gb|AET01723.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1085

 Score =  329 bits (843), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 228/611 (37%), Positives = 322/611 (52%), Gaps = 70/611 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLE-HLQKQML 62
           S+ V+++GIWGM GIGKTT+A+ +F +   E+E  CF+++VR  SE  G     L+K++L
Sbjct: 255 SEDVRVLGIWGMPGIGKTTIAEEVFRRLRSEYETCCFMANVREESERYGTNSLRLRKKLL 314

Query: 63  STTL-SEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           ST L  E L+    N +P   K+R+ RMK+LIVLDDV +  QL+ L+G +D  G GSRI+
Sbjct: 315 STLLEDEDLKDDMINGLPPLVKKRLSRMKVLIVLDDVKDAEQLEVLVGTVDWLGPGSRII 374

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAF-KENHCPEDLNWHSRSVVSYT 179
           +T RDK+VL    G+   IY V  L+  E+F+ F   AF K+ H   +    S+ +V YT
Sbjct: 375 ITARDKQVLS---GKVDDIYEVEPLDSAESFQLFNLHAFNKQKHLEMEYYKLSKKMVDYT 431

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            G PLVL+ L + L  K K+ W     +L      +I +++D+ ++ +  L    K IFL
Sbjct: 432 AGVPLVLKALANLLRGKDKAIWESQSRNLKI---EQIENVHDVFRLIYTNLDYYEKIIFL 488

Query: 240 DIACFFEGEDKDFVASILDD-----SESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQ 293
           DIACFF+G         L       S S  L+ L DK+LV+IS  + ++MHDI+QE  R+
Sbjct: 489 DIACFFDGLKLKLELINLLLKDRYYSVSTRLERLKDKALVTISQQSIVSMHDIIQETARE 548

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IVRQES +EPG RSRL DP +I  VLK +KG++AI  + + LS+IK + L P+AF  MS 
Sbjct: 549 IVRQESVEEPGNRSRLLDPDDIYHVLKDDKGSEAIRSMAIRLSEIKELELSPQAFAKMSK 608

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           L+    Y              T+   +   + LP GL+ LP +LRYL W+ YPL  LPS 
Sbjct: 609 LKFLDIY--------------TKGSQNEGSLSLPQGLESLPNELRYLRWEYYPLEFLPSK 654

Query: 414 FKPKNLVELNLRCSKVEQPWEGEK------------------------------------ 437
           F  +NLV LNL  S++++ W G K                                    
Sbjct: 655 FSAENLVILNLPYSRLKKLWHGAKDIVNLNVLILSSSALLTELPDFSKATNLAVLDLQSC 714

Query: 438 ---ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
                V  S+ + K L  L   GC SL+S  SN H      ++   C  L EF   S  +
Sbjct: 715 VGLTSVHPSVFSLKNLEKLDLSGCSSLKSLQSNTHLSSLSYLSLYNCTALKEFSVTSENI 774

Query: 495 TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
             L L  ++I+E+PSSI   T LE L L G   ++ +  S   L  L  L L  C  L+ 
Sbjct: 775 NELDLELTSIKELPSSIGLQTKLEKLYL-GHTHIESLPKSIKNLTRLRHLDLHHCSELQT 833

Query: 555 FPEILEKMEHL 565
            PE+   +E L
Sbjct: 834 LPELPPSLETL 844



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 7/175 (4%)

Query: 568 IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLP 626
           I S    +TELP  F     L VL ++ C  L ++  ++ SL+ L  + L+  S++  L 
Sbjct: 687 ILSSSALLTELPD-FSKATNLAVLDLQSCVGLTSVHPSVFSLKNLEKLDLSGCSSLKSLQ 745

Query: 627 SSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL 686
           S+  LS++       +C  L+ F  T       +  L +   +++E+P  I   + LE L
Sbjct: 746 SNTHLSSLSYLS-LYNCTALKEFSVTS----ENINELDLELTSIKELPSSIGLQTKLEKL 800

Query: 687 YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           YL   + ESLP  IK +++LR + L   + LQ+LPELP  L+ L    C  L+++
Sbjct: 801 YLGHTHIESLPKSIKNLTRLRHLDLHHCSELQTLPELPPSLETLDADGCVSLENV 855



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 191/449 (42%), Gaps = 85/449 (18%)

Query: 548  GCLNLEHFPEILEKM-EHLKRIYSDRTPITELPSSF--ENLPGLEVLFVEDCSKLDNLPD 604
            G L+L   P+ LE +   L+ +  +  P+  LPS F  ENL  L + +     KL +   
Sbjct: 623  GSLSL---PQGLESLPNELRYLRWEYYPLEFLPSKFSAENLVILNLPYSR-LKKLWHGAK 678

Query: 605  NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLH 664
            +I +L  L  IL++++ +++LP     +N L  LD   C GL S              +H
Sbjct: 679  DIVNLNVL--ILSSSALLTELPDFSKATN-LAVLDLQSCVGLTS--------------VH 721

Query: 665  ISDYAVREIPQ-EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM------L 717
             S ++++ + + +++  SSL+ L  + +        +   + L+   +   N+      L
Sbjct: 722  PSVFSLKNLEKLDLSGCSSLKSLQSNTHLSSLSYLSLYNCTALKEFSVTSENINELDLEL 781

Query: 718  QSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDC 777
             S+ ELP  +     +  K L+ L +    +ESL  +  N+ R        L++L+L  C
Sbjct: 782  TSIKELPSSIG----LQTK-LEKLYLGHTHIESLPKSIKNLTR--------LRHLDLHHC 828

Query: 778  NMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLK 837
            + L++LPELP  L+ L    C                    LE ++  S     A E LK
Sbjct: 829  SELQTLPELPPSLETLDADGC------------------VSLENVAFRST----ASEQLK 866

Query: 838  SAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVL 897
                   F NCLKLN  +   I  ++  +I  M  +   + ++    ++  +    + V 
Sbjct: 867  EKKKKVTFWNCLKLNEPSLKAIELNA--QINMMNFSHKHITWD---RDRDHDHNQGMYVY 921

Query: 898  PGSEIPDWFSNQSSGSS-ICIQL--PPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSF 954
            PGS+IP+W    ++    I I L   P+ S    +GF F  V+ +   +    + F +S 
Sbjct: 922  PGSKIPEWLEYSTTRHDYITIDLFSAPYFSK---LGFIFGFVIPTISSEGSTLK-FKISD 977

Query: 955  QFDLEIKTL-------SETKHVDLGYNSR 976
              D  IK          E+ HV L Y+ R
Sbjct: 978  GEDEGIKMYLDRPRHGIESDHVYLVYDPR 1006


>gi|10178211|dbj|BAB11635.1| TMV resistance protein N [Arabidopsis thaliana]
          Length = 1130

 Score =  329 bits (843), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 277/788 (35%), Positives = 395/788 (50%), Gaps = 109/788 (13%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            SD V+++ I+GMGGIGKTTLAK  F++FSH FEGS F+ + R  S+   G  HLQ Q+L
Sbjct: 210 GSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLENFREYSKKPEGRTHLQHQLL 269

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
           S  L    ++    + H  KER R  ++L+V+DDV++V QL     + D FG GSRI++T
Sbjct: 270 SDILRRN-DIEFKGLDHAVKERFRSKRVLLVVDDVDDVHQLNSAAIDRDCFGHGSRIIIT 328

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TR+  +L++ R E    Y    L+ +E+ E F   AF+ +  P++   HS  VV+Y  G 
Sbjct: 329 TRNMHLLKQLRAEGS--YSPKELDGDESLELFSWHAFRTSEPPKEFLQHSEEVVTYCAGL 386

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL +EVLG+ L  +    W   L  L RI    I      L+ISFN LT   K +FLDIA
Sbjct: 387 PLAVEVLGAFLIERSIREWESTLKLLKRIPNDNIQAK---LQISFNALTIEQKDVFLDIA 443

Query: 243 CFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
           CFF G D  +VA ILD        VL +L+++ L++ISGN + MHD+L++MGRQIVR+ S
Sbjct: 444 CFFIGVDSYYVACILDGCNLYPDIVLSLLMERCLITISGNNIMMHDLLRDMGRQIVREIS 503

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
            K+ G+RSRLW   ++  VLK   GT+AIEG+ L    +     +  AF  M  LRL   
Sbjct: 504 PKKCGERSRLWSHNDVVGVLKKKSGTNAIEGLSLKADVMDFQYFEVEAFAKMQELRLL-- 561

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
                             +L Y  V L    ++ PK LR+L W  + L   P N   ++L
Sbjct: 562 ------------------ELRY--VDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESL 601

Query: 420 VELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
             L+L+ S +++ W+ +    P+++  +  LS   +     LR  P           +FS
Sbjct: 602 AALDLQYSNLKRFWKAQSPPQPANMVKYLDLSHSVY-----LRETP-----------DFS 645

Query: 480 YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECL-TDLEVLDLRGCKRLKRISTSFCKL 538
           Y  N+ +   I+ K   L         V  SI  L   L +L+L  C  L  +     KL
Sbjct: 646 YFPNVEKLILINCKSLVL---------VHKSIGILDKKLVLLNLSSCIELDVLPEEIYKL 696

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
           +SL +L L  C  LE   + L ++E L  + +D T + E+PS+   L  L+ L +  C  
Sbjct: 697 KSLESLFLSNCSKLERLDDALGELESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKG 756

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
           L  L D+I +L             S+   SV+L   LR +  S   GL     T++  LS
Sbjct: 757 L--LSDDIDNL------------YSEKSHSVSL---LRPVSLS---GL-----TYMRILS 791

Query: 659 AMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
            +G  ++SD     IP++I  LS L  L L GN+F +LP               DF  L 
Sbjct: 792 -LGYCNLSD---ELIPEDIGSLSFLRDLDLRGNSFCNLPT--------------DFATLP 833

Query: 719 SLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC--LQYLNLED 776
           +L EL L        DC  LQS+  LP  L  LD+  C ML+  P++  C  L  L L D
Sbjct: 834 NLGELLLS-------DCSKLQSILSLPRSLLFLDVGKCIMLKRTPDISKCSALFKLQLND 886

Query: 777 CNMLRSLP 784
           C  L  +P
Sbjct: 887 CISLFEIP 894



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 122/292 (41%), Gaps = 42/292 (14%)

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTP-----------------ITELPSSFENLPGLEVLF 592
           L+LE    +  +  +LKR +  ++P                 + E P  F   P +E L 
Sbjct: 596 LSLESLAALDLQYSNLKRFWKAQSPPQPANMVKYLDLSHSVYLRETPD-FSYFPNVEKLI 654

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAI--SQLPSSVALSNMLRSLDSSHCKGLESFP 650
           + +C  L  +  +IG L+    +L  +S I    LP  +     L SL  S+C  LE   
Sbjct: 655 LINCKSLVLVHKSIGILDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLD 714

Query: 651 RTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG---------NNFESLPAIIK 701
              L  L ++  L     A+REIP  I  L  L+ L L+G         +N  S  +   
Sbjct: 715 DA-LGELESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKGLLSDDIDNLYSEKS--H 771

Query: 702 QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTG---CNM 758
            +S LR + L     ++ L      L Y +L D  + + +  L F L  LDL G   CN+
Sbjct: 772 SVSLLRPVSLSGLTYMRILS-----LGYCNLSDELIPEDIGSLSF-LRDLDLRGNSFCNL 825

Query: 759 LRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
                 LP  L  L L DC+ L+S+  LP  L  L V  C  L+  P+I  C
Sbjct: 826 PTDFATLP-NLGELLLSDCSKLQSILSLPRSLLFLDVGKCIMLKRTPDISKC 876


>gi|186527047|ref|NP_001119319.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332006746|gb|AED94129.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1191

 Score =  328 bits (842), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 277/788 (35%), Positives = 395/788 (50%), Gaps = 109/788 (13%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            SD V+++ I+GMGGIGKTTLAK  F++FSH FEGS F+ + R  S+   G  HLQ Q+L
Sbjct: 208 GSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLENFREYSKKPEGRTHLQHQLL 267

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
           S  L    ++    + H  KER R  ++L+V+DDV++V QL     + D FG GSRI++T
Sbjct: 268 SDILRRN-DIEFKGLDHAVKERFRSKRVLLVVDDVDDVHQLNSAAIDRDCFGHGSRIIIT 326

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TR+  +L++ R E    Y    L+ +E+ E F   AF+ +  P++   HS  VV+Y  G 
Sbjct: 327 TRNMHLLKQLRAEGS--YSPKELDGDESLELFSWHAFRTSEPPKEFLQHSEEVVTYCAGL 384

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL +EVLG+ L  +    W   L  L RI    I      L+ISFN LT   K +FLDIA
Sbjct: 385 PLAVEVLGAFLIERSIREWESTLKLLKRIPNDNIQAK---LQISFNALTIEQKDVFLDIA 441

Query: 243 CFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
           CFF G D  +VA ILD        VL +L+++ L++ISGN + MHD+L++MGRQIVR+ S
Sbjct: 442 CFFIGVDSYYVACILDGCNLYPDIVLSLLMERCLITISGNNIMMHDLLRDMGRQIVREIS 501

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
            K+ G+RSRLW   ++  VLK   GT+AIEG+ L    +     +  AF  M  LRL   
Sbjct: 502 PKKCGERSRLWSHNDVVGVLKKKSGTNAIEGLSLKADVMDFQYFEVEAFAKMQELRLL-- 559

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
                             +L Y  V L    ++ PK LR+L W  + L   P N   ++L
Sbjct: 560 ------------------ELRY--VDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESL 599

Query: 420 VELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
             L+L+ S +++ W+ +    P+++  +  LS   +     LR  P           +FS
Sbjct: 600 AALDLQYSNLKRFWKAQSPPQPANMVKYLDLSHSVY-----LRETP-----------DFS 643

Query: 480 YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECL-TDLEVLDLRGCKRLKRISTSFCKL 538
           Y  N+ +   I+ K   L         V  SI  L   L +L+L  C  L  +     KL
Sbjct: 644 YFPNVEKLILINCKSLVL---------VHKSIGILDKKLVLLNLSSCIELDVLPEEIYKL 694

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
           +SL +L L  C  LE   + L ++E L  + +D T + E+PS+   L  L+ L +  C  
Sbjct: 695 KSLESLFLSNCSKLERLDDALGELESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKG 754

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
           L  L D+I +L             S+   SV+L   LR +  S   GL     T++  LS
Sbjct: 755 L--LSDDIDNL------------YSEKSHSVSL---LRPVSLS---GL-----TYMRILS 789

Query: 659 AMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
            +G  ++SD     IP++I  LS L  L L GN+F +LP               DF  L 
Sbjct: 790 -LGYCNLSD---ELIPEDIGSLSFLRDLDLRGNSFCNLPT--------------DFATLP 831

Query: 719 SLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC--LQYLNLED 776
           +L EL L        DC  LQS+  LP  L  LD+  C ML+  P++  C  L  L L D
Sbjct: 832 NLGELLLS-------DCSKLQSILSLPRSLLFLDVGKCIMLKRTPDISKCSALFKLQLND 884

Query: 777 CNMLRSLP 784
           C  L  +P
Sbjct: 885 CISLFEIP 892



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 122/292 (41%), Gaps = 42/292 (14%)

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTP-----------------ITELPSSFENLPGLEVLF 592
           L+LE    +  +  +LKR +  ++P                 + E P  F   P +E L 
Sbjct: 594 LSLESLAALDLQYSNLKRFWKAQSPPQPANMVKYLDLSHSVYLRETPD-FSYFPNVEKLI 652

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAI--SQLPSSVALSNMLRSLDSSHCKGLESFP 650
           + +C  L  +  +IG L+    +L  +S I    LP  +     L SL  S+C  LE   
Sbjct: 653 LINCKSLVLVHKSIGILDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLD 712

Query: 651 RTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG---------NNFESLPAIIK 701
              L  L ++  L     A+REIP  I  L  L+ L L+G         +N  S  +   
Sbjct: 713 DA-LGELESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKGLLSDDIDNLYSEKS--H 769

Query: 702 QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTG---CNM 758
            +S LR + L     ++ L      L Y +L D  + + +  L F L  LDL G   CN+
Sbjct: 770 SVSLLRPVSLSGLTYMRILS-----LGYCNLSDELIPEDIGSLSF-LRDLDLRGNSFCNL 823

Query: 759 LRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
                 LP  L  L L DC+ L+S+  LP  L  L V  C  L+  P+I  C
Sbjct: 824 PTDFATLP-NLGELLLSDCSKLQSILSLPRSLLFLDVGKCIMLKRTPDISKC 874


>gi|297819854|ref|XP_002877810.1| hypothetical protein ARALYDRAFT_323710 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297323648|gb|EFH54069.1| hypothetical protein ARALYDRAFT_323710 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1251

 Score =  328 bits (842), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 300/996 (30%), Positives = 465/996 (46%), Gaps = 143/996 (14%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V+ +GIWGM GIGKTTLAKA FDQ S ++E SCF+ D    +    GL  L +      L
Sbjct: 180  VRSIGIWGMPGIGKTTLAKAAFDQLSGDYEASCFIRDFH-KAFHEKGLYGLLEVHFGKIL 238

Query: 67   SEKLEV-AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
             E+L + +    P      +R  ++L+VLDDV +    +  +G  D F  GS I++T+RD
Sbjct: 239  REELGINSSITRPILLTNVLRHKRVLVVLDDVCKPLDAESFLGGFDWFCPGSLIIITSRD 298

Query: 126  KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
            K+V    R    +IY V GL  EEA + F   AF ++   E L   S  V++Y  GNPLV
Sbjct: 299  KQVFSLCR--VNQIYEVPGLNEEEALQLFSRCAFGKDIRNETLQKLSMKVINYANGNPLV 356

Query: 186  LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF 245
            L   G   C+ R++   + +  L ++ +   H+I+D +K +++ L+   K+IFLDIAC F
Sbjct: 357  LTFFG---CMSRENPRLREMTFL-KLKKYLAHEIHDAVKSTYDSLSSNEKNIFLDIACLF 412

Query: 246  EGEDKDFVASILDDSE--SDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKE 302
             GE+ D V  +L+     S V +++L++K LVSI+   + MH+++Q +G +I+       
Sbjct: 413  RGENVDCVMHLLEGCGFFSRVEINVLVEKCLVSIAEGRVVMHNLIQSIGHEIINGGK--- 469

Query: 303  PGKRSRLWDPKEISRVLKHNK--GTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
              +RSRLW P  I   L+  +  G++ IE I+LD S +   +++P AF NM NLR  K +
Sbjct: 470  --RRSRLWKPSRIKYFLEDTQVLGSEDIEAIYLDPSAL-SFDVNPLAFENMYNLRYLKIF 526

Query: 361  VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                          +    ++S + LP G+  LP++LR LHW+ +PL +LP +F  +NLV
Sbjct: 527  --------------SSNPGNHSALHLPKGVKSLPEELRLLHWEQFPLLSLPQDFNTRNLV 572

Query: 421  ELNLRCSKVEQPWEGEKA---------CVPSS------IQNFKYLSALSFKGCQSLRSFP 465
             LN+  SK+++ WEG K          C          +QN + +  +  +GC  L+ F 
Sbjct: 573  ILNMCYSKIQRLWEGTKELGMLKRIMLCHSQQLVDIQELQNARNIEVIDLQGCARLQRFI 632

Query: 466  SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLE-VLDLRG 524
            +  HF     IN S C+ +  FP++   +  LYL Q+ +  +P+ I    D   + D + 
Sbjct: 633  ATGHFQHLRVINLSGCIKIKSFPEVPPNIEELYLKQTGLRSIPTVIFSPQDNSFIYDHQD 692

Query: 525  CKRLKR-ISTSFCKLRSLVTLILLGCLNLEH---FPEILEKMEHLKRIYSDRTPITELPS 580
             K L R +S+    L  +V L  L  L+L H     +I    ++L+++Y   T I ELP 
Sbjct: 693  HKFLNREVSSESQSLSIMVYLKYLKVLDLSHCLGLEDIHGIPKNLRKLYLGGTAIQELP- 751

Query: 581  SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY---------------------ILAAA 619
            S  +L  L VL +E+C +L+ LP  IG+L  L                       +  A 
Sbjct: 752  SLMHLSELVVLDLENCKRLEKLPMGIGNLSSLAVLNLSGCSELEDIQGIPRNLEELYLAG 811

Query: 620  SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAVREIPQEI 677
            +AI ++PSS+   + L  LD  +CK L   P     L  L  + L   S  ++RE+   I
Sbjct: 812  TAIQEVPSSIKHLSELVVLDLQNCKRLRHLPMEIGNLKSLVTLKLTDPSGMSIREVSTSI 871

Query: 678  AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM----LQSLPELPLCLKYLHLI 733
                  EI   + +N   L   + + +  R  HL    +    L  L      L  L L 
Sbjct: 872  IQNGISEI---NISNLNYLLFTVNENADQRREHLPQPRLPSSSLHGLVPRFYALVSLSLF 928

Query: 734  DCKMLQ------SLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLN---LEDCNMLRSLP 784
            +  ++       SLP +      LDL G N    +PE    L  L+   L  C  L SLP
Sbjct: 929  NASLMHIPEEICSLPSVVL----LDL-GRNGFSKIPESIKQLSKLHSLRLRHCRNLISLP 983

Query: 785  ELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFE 844
             LP  L+LL V  C  L+S                         + W  E   S    + 
Sbjct: 984  VLPQSLKLLNVHGCVSLES-------------------------VSWGFEQFPSH---YT 1015

Query: 845  FTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSL---IVLPGSE 901
            F++C   + K   K +   L ++  +             NE+  EL  +L   I   G++
Sbjct: 1016 FSDCFNRSPKVARKRVVKGLAKVASIG------------NERQQELIKALAFSICGAGAD 1063

Query: 902  IPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
                + N  +G    I++ P S  + L+GFA   V+
Sbjct: 1064 QTSSY-NLRAGPFATIEITP-SLRKTLLGFAIFIVV 1097


>gi|357486939|ref|XP_003613757.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515092|gb|AES96715.1| Disease resistance-like protein [Medicago truncatula]
          Length = 807

 Score =  328 bits (841), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 228/615 (37%), Positives = 322/615 (52%), Gaps = 69/615 (11%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S++ V +VGI+GMGG+GKTTLA A+++  + +F+  CF+++VR NS    GL HLQ+ 
Sbjct: 240 VESNEGVHMVGIYGMGGLGKTTLACAVYNCIADQFDSLCFLANVRENS-MKHGLVHLQEM 298

Query: 61  MLSTTLSEKLEV-----AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           +L     EK         G +I    K R+   K+L++LDDVN + QLK L GELD FG 
Sbjct: 299 LLHELGEEKDHKLCSLNKGVSI---IKSRLHGKKILLILDDVNSLEQLKALAGELDWFGS 355

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           GSR+++TTRDK +L  +R E  ++Y V GL  +EA + F   AFK     +     S+ V
Sbjct: 356 GSRVIITTRDKHLLHVYRVE--RVYEVEGLNRKEALQLFGCNAFKTQKIDQRYEDISKRV 413

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           V Y+KG PL +E++GS L  K    W   L    RI      +I +IL++S++ L    K
Sbjct: 414 VLYSKGLPLAVEIIGSDLYGKTILEWESALDTYARIPHE---NIQEILRVSYDGLKEFEK 470

Query: 236 SIFLDIACFFEGEDKDFVASIL----DDSESDVLDILIDKSLVSISGNFLNMHDILQEMG 291
            IFLD+ACFF+G     V +IL      S    + +LIDKSL+      + MHD++++MG
Sbjct: 471 EIFLDLACFFKGAKLSDVKNILCCGRGFSPDYAIQVLIDKSLIKFEDYSVKMHDMIEDMG 530

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IVR E+  +PG+RSRLW  K+I  V K NKG+D  E I L L K K +  D  A  NM
Sbjct: 531 REIVRLEAPSKPGERSRLWFSKDILHVFKENKGSDKTEIIMLRLLKDKKVQCDRNALKNM 590

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NL++                    E+  +SK     G ++LPK LR L W  YP  +LP
Sbjct: 591 ENLKILVI-----------------EEACFSK-----GPNHLPKSLRVLKWCDYPESSLP 628

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
           ++F PK LV L+L          G        I  FK L  +   GC+ L+  P      
Sbjct: 629 ADFDPKKLVILDLSM--------GHFTFRNQMIMKFKSLREMKLSGCKFLKQVPDISGAP 680

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
               ++   C NL+                    +V  S+  L  LE L+L  C  L R+
Sbjct: 681 NLKKLHLDSCKNLV--------------------KVHDSVGLLKKLEDLNLNRCTSL-RV 719

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
                 L SL T+ L  C +L+ FPEILEKME++  +    T I+ELP S E L GL  L
Sbjct: 720 LPHGINLPSLKTMSLRNCASLKRFPEILEKMENITYLGLSDTGISELPFSIELLEGLTNL 779

Query: 592 FVEDCSKLDNLPDNI 606
            ++ C +L  LP +I
Sbjct: 780 TIDRCQELVELPSSI 794


>gi|251748502|gb|ACT11053.1| TIR-NB-LRR resistance protein [Arachis diogoi]
          Length = 1095

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 230/657 (35%), Positives = 341/657 (51%), Gaps = 90/657 (13%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           ++V+++GIWGMGG GK T+++ +++    E+E   F+ +VR  S    G+ +L+ ++ S 
Sbjct: 251 ESVRVIGIWGMGGFGKITVSEVVYNLLRDEYESVVFLRNVREVS-LRHGIIYLKNELFSK 309

Query: 65  TLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
            L E LE+   N +P + ++R+ RMK+LIVLDDVN+  Q + L+G    FG GSRI+VTT
Sbjct: 310 LLGENLEIDTQNGLPTYVEKRIGRMKVLIVLDDVNQSEQFEILVGTPQSFGSGSRIIVTT 369

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPE-DLNWHSRSVVSYTKGN 182
           RD++VL K+       Y+V  LE +EA + F   AF++N   E +    +  VV + KG 
Sbjct: 370 RDRQVLAKY-AHANDTYKVEPLESDEALQLFNLIAFQQNEVVEKEYRALAERVVDHAKGI 428

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PLVL+ LG     K K  W   L  L +I   ++   +D++++S+++L  + KS+ LDIA
Sbjct: 429 PLVLKTLGHLPHEKEKWIWESELEKLGKIPNKKV---FDMMRLSYDELDRQEKSMLLDIA 485

Query: 243 CFFEGED--KDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGRQIVR 296
           CFF+G      ++ S+L   +  V   L  L D S ++IS  + + MHDI+QEM  +IVR
Sbjct: 486 CFFDGMKLKVKYLESLLKHGDFPVPAALKRLEDISFITISKEDVVTMHDIVQEMAWEIVR 545

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK--IKGINLDPRAFTNMSNL 354
           QES ++PG  SR+W+P++I +VLK+N+G++AI  I    SK  ++ + L P+ F+ MS L
Sbjct: 546 QESIEDPGNYSRIWNPEDIYQVLKNNQGSEAIRSINFSYSKATVRNMQLSPQVFSKMSKL 605

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           R   FY               E  L    +  P GL  LP +LRYL W  YPL++LP  F
Sbjct: 606 RFLDFY--------------GERHL----LHFPEGLQQLPSRLRYLRWTYYPLKSLPKKF 647

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             + LV L L  S+VE+ W G        IQN   L  L       L+ FP         
Sbjct: 648 SAEKLVILELPYSQVEKLWYG--------IQNLVNLKVLKAPYSSQLKEFPDLSKATNLE 699

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            ++F YC+ L          TR++           S+  L  LE LDL  C +L ++ T+
Sbjct: 700 ILDFKYCLRL----------TRVH----------PSVFSLNKLETLDLSWCSQLAKLETN 739

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
              L+SL  L L  C  L  F  I E M  L   +   T I ELPSSF     LE L + 
Sbjct: 740 -AHLKSLRYLSLYHCKRLNKFSVISENMTELDLRH---TSIRELPSSFGCQSKLEKLHL- 794

Query: 595 DCSKLDNLPDNIGSLEYLYYILAAASAISQLPS-SVALSNMLRSLDSSHCKGLESFP 650
                                  A S + ++P+ S+ L   L+ LD S CK L++ P
Sbjct: 795 -----------------------ANSEVKKMPADSMKLLTSLKYLDISDCKNLQTLP 828



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 72/275 (26%)

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILE----KMEHLKRIY-----------SDRTPITELP 579
           F K+  L  L   G  +L HFPE L+    ++ +L+  Y           +++  I ELP
Sbjct: 599 FSKMSKLRFLDFYGERHLLHFPEGLQQLPSRLRYLRWTYYPLKSLPKKFSAEKLVILELP 658

Query: 580 SS--------FENLPGLEVLFVEDCSKLDNLPD-----NIGSLEYLYYI----------- 615
            S         +NL  L+VL     S+L   PD     N+  L++ Y +           
Sbjct: 659 YSQVEKLWYGIQNLVNLKVLKAPYSSQLKEFPDLSKATNLEILDFKYCLRLTRVHPSVFS 718

Query: 616 --------LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD 667
                   L+  S +++L ++  L + LR L   HCK L  F       ++ + L H S 
Sbjct: 719 LNKLETLDLSWCSQLAKLETNAHLKS-LRYLSLYHCKRLNKFS-VISENMTELDLRHTS- 775

Query: 668 YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCL 727
             +RE+P      S LE L+L+ +  + +PA             +   +L SL       
Sbjct: 776 --IRELPSSFGCQSKLEKLHLANSEVKKMPA-------------DSMKLLTSL------- 813

Query: 728 KYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSL 762
           KYL + DCK LQ+LP LP  +E+LD   C  L+++
Sbjct: 814 KYLDISDCKNLQTLPELPLSIETLDADNCTSLKAV 848


>gi|356495059|ref|XP_003516398.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1131

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 236/650 (36%), Positives = 344/650 (52%), Gaps = 84/650 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAG-PNIP 78
           KTT+A+ IF +   E++G  F+++V+  S   G + +L++++ S  L E +E+   P + 
Sbjct: 227 KTTIAEEIFSKLRSEYDGYYFLANVKEESSRQGTI-YLKRKLFSAILGEDVEMDHMPRLS 285

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
           ++ K ++ RMK+LIVLDDVN+    ++L    D FG+GSRI++TTRDK+VL   + ++  
Sbjct: 286 NYIKRKIGRMKVLIVLDDVNDSNLPEKLFENHDWFGRGSRIIITTRDKQVLIANKVDD-- 343

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY+V  L   EA E F  +AF +NH   +    S  VV+Y KG PLVL+VLG  LC K K
Sbjct: 344 IYQVGALNNSEALELFSLYAFNQNHFDMEYYKLSEMVVNYAKGIPLVLKVLGRLLCGKDK 403

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDK--DFVASI 256
             W   LH L  +  +   DIY  +++SF+ L  + + I LD+ACFF G +   D +  +
Sbjct: 404 EVWESQLHKLENMPNT---DIYHAMRLSFDDLDRKEQKILLDLACFFIGLNLKLDSIKVL 460

Query: 257 LDDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLW 310
           L D+E D      L+ L DK+LV+IS  N ++MHDI+QEM  +IVRQES ++PG RSRL 
Sbjct: 461 LKDNERDDSVVAGLERLKDKALVTISEDNVISMHDIIQEMAWEIVRQESIEDPGNRSRLI 520

Query: 311 DPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
           DP ++  VLK+NKGT+AI  I  +L  I+ + L P  F  MS L+    Y  K +++  L
Sbjct: 521 DPNDVYEVLKYNKGTEAIRSIRANLPAIQNLQLSPHVFNKMSKLQF--VYFRKNFDVFPL 578

Query: 371 PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
                          LP GL   P +LRYL W  YPL +LP NF  +NLV  +L  S V 
Sbjct: 579 ---------------LPRGLQSFPAELRYLSWSHYPLISLPENFSAENLVIFDLSGSLVL 623

Query: 431 QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP-----SNLHFVCPVTINFSYCVNLI 485
           + W+G        +QN   L  L+  GC +L+  P     +NL F     +  S C  L+
Sbjct: 624 KLWDG--------VQNLMNLKVLTVAGCLNLKELPDLSKATNLEF-----LEISSCSQLL 670

Query: 486 EF-PQISG--KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLV 542
              P I    K+ RL     ++  + S    LT L+ L+LRGCK L + S +   +  L 
Sbjct: 671 SMNPSILSLKKLERLSAHHCSLNTLISD-NHLTSLKYLNLRGCKALSQFSVTSENMIELD 729

Query: 543 TLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNL 602
               L   ++  FP    +  +LK +      I  LPSSF NL  L  L VE   KL  L
Sbjct: 730 ----LSFTSVSAFPSTFGRQSNLKILSLVFNNIESLPSSFRNLTRLRYLSVESSRKLHTL 785

Query: 603 PDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES--FP 650
                             ++++LP+S      L  LD++ CK L++  FP
Sbjct: 786 ------------------SLTELPAS------LEVLDATDCKSLKTVYFP 811



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 32/228 (14%)

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
           +L + DL G   LK +      L +L  L + GCLNL+  P++                 
Sbjct: 611 NLVIFDLSGSLVLK-LWDGVQNLMNLKVLTVAGCLNLKELPDL----------------- 652

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
                       LE L +  CS+L ++  +I SL+ L  + A   +++ L S   L++ L
Sbjct: 653 -------SKATNLEFLEISSCSQLLSMNPSILSLKKLERLSAHHCSLNTLISDNHLTS-L 704

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFES 695
           + L+   CK L  F  T       M  L +S  +V   P      S+L+IL L  NN ES
Sbjct: 705 KYLNLRGCKALSQFSVT----SENMIELDLSFTSVSAFPSTFGRQSNLKILSLVFNNIES 760

Query: 696 LPAIIKQMSQLRFIHLEDFNMLQ--SLPELPLCLKYLHLIDCKMLQSL 741
           LP+  + +++LR++ +E    L   SL ELP  L+ L   DCK L+++
Sbjct: 761 LPSSFRNLTRLRYLSVESSRKLHTLSLTELPASLEVLDATDCKSLKTV 808



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 92/396 (23%), Positives = 155/396 (39%), Gaps = 88/396 (22%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALS 632
           + +L    +NL  L+VL V  C  L  LPD     +LE+L  I + +  +S  PS ++L 
Sbjct: 622 VLKLWDGVQNLMNLKVLTVAGCLNLKELPDLSKATNLEFLE-ISSCSQLLSMNPSILSLK 680

Query: 633 NMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNN 692
            + R L + HC          L  L  + L        + + Q      ++  L LS  +
Sbjct: 681 KLER-LSAHHCSLNTLISDNHLTSLKYLNL-----RGCKALSQFSVTSENMIELDLSFTS 734

Query: 693 FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLD 752
             + P+   + S L+ + L  FN ++SLP                               
Sbjct: 735 VSAFPSTFGRQSNLKILSLV-FNNIESLPS------------------------------ 763

Query: 753 LTGCNMLRSLPELPLCLQYLNLEDCNMLR--SLPELPLCLQLLTVRNCNRLQSL--PEIL 808
            +  N+ R        L+YL++E    L   SL ELP  L++L   +C  L+++  P I 
Sbjct: 764 -SFRNLTR--------LRYLSVESSRKLHTLSLTELPASLEVLDATDCKSLKTVYFPSIA 814

Query: 809 LCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIR 868
              +E    +L                         F NCL+L+  +   I  ++ + + 
Sbjct: 815 EQFKENRREIL-------------------------FWNCLELDEHSLKAIGFNARINVM 849

Query: 869 HMAIASLRLGYEMAINEKLSELRGSLI--VLPGSEIPDWFSNQSSGSSICIQL--PPHSS 924
             A  +L    E  ++  L   R   +  V PGS IP+W   +++   + I L   PHS+
Sbjct: 850 KSAYHNLSATGEKNVDFYLRYSRSYQVKYVYPGSSIPEWLEYKTTKDYLIIDLSSTPHST 909

Query: 925 CRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEI 960
              L+GF F  V+   K   D  R  ++ + F + +
Sbjct: 910 ---LLGFVFSFVIAESK---DHNRAVFLDYPFYITV 939


>gi|451799084|gb|AGF69238.1| TMV resistance protein N-like protein 1 [Vitis labrusca]
          Length = 1514

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 220/611 (36%), Positives = 336/611 (54%), Gaps = 52/611 (8%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK---LEVAGPN 76
           KTT+AKAI+++ SH+++GS F+ +++  S+  G +  LQ+++L   L  K   +      
Sbjct: 225 KTTIAKAIYNEISHQYDGSSFLINIKERSK--GDILQLQQELLHGILRGKNFKINNVDEG 282

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           I    K  +   ++L++ DDV+E+ QL+ L  E D F   S I++T+RDK VL ++  + 
Sbjct: 283 IS-MIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDWFRAKSTIIITSRDKHVLAQYGADI 341

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
           +  Y V+ L  EEA E F  +AFK+N   E     S +++ Y  G PL L+VLG+SL  K
Sbjct: 342 R--YEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYNIIDYANGLPLALKVLGASLFGK 399

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
           + S+W   L  L  +   EIH++   L+ISF+ L    K IFLD+ACFF+G+D+DFV+ I
Sbjct: 400 KISNWESALCKLKIMPHMEIHNV---LRISFDGLDDIDKGIFLDVACFFKGDDRDFVSRI 456

Query: 257 LDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
           L       +  L D+ L+++S N L+MHD++Q+MG +I+RQE  ++PG+RSRL D     
Sbjct: 457 LGPHAKHAITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQECPEDPGRRSRLCDSNAY- 515

Query: 317 RVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTE 376
            VL  NKGT AIEG+FLD  K     L   +F  M+ LRL K + P+     KL      
Sbjct: 516 HVLTGNKGTRAIEGLFLDRCKFNPSELTTESFKEMNRLRLLKIHNPR----RKL------ 565

Query: 377 EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE 436
               + K  LP   ++   +L YLHWD YPL +LP NF  KNLVEL+LR S ++Q W G 
Sbjct: 566 ----FLKDHLPRDFEFYSYELAYLHWDGYPLESLPMNFHAKNLVELSLRDSNIKQVWRGN 621

Query: 437 KAC----------------VP--SSIQNFKYLSALSFKGCQSLRSFPSNLH-FVCPVTIN 477
           K                  +P  SS+ N   L  L+ +GC +L   P  ++ +    T++
Sbjct: 622 KLHDKLRVIDLSHSVHLIRIPDFSSVPN---LEILTLEGCVNLELLPRGIYKWKHLQTLS 678

Query: 478 FSYCVNLIEFPQISGKVTRLY---LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            + C  L  FP+I G +  L    L  +AI ++PSSI  L  L+ L L+ C +L +I   
Sbjct: 679 CNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNH 738

Query: 535 FCKLRSLVTLILLGCLNLE-HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
            C L SL  L L  C  +E   P  +  +  L+++  ++   + +P++   L  LEVL +
Sbjct: 739 ICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNL 798

Query: 594 EDCSKLDNLPD 604
             C+ L+ +P+
Sbjct: 799 SHCNNLEQIPE 809



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 131/241 (54%), Gaps = 3/241 (1%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S + EVP  IE   +L+ L LR C+ L  + +S    +SL TL   GC  LE FPEIL+ 
Sbjct: 1092 SDMNEVPI-IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQD 1150

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL-EYLYYILAAAS 620
            ME L+++Y + T I E+PSS + L GL+ L + +C  L NLP++I +L  +   +++   
Sbjct: 1151 MESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCP 1210

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
              ++LP ++     L  L   H   + +F    L GL ++  L +    +RE P EI YL
Sbjct: 1211 NFNKLPDNLGRLQSLEYLFVGHLDSM-NFQLPSLSGLCSLRTLKLQGCNLREFPSEIYYL 1269

Query: 681  SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
            SSL  L L GN+F  +P  I Q+  L  ++L    MLQ +PELP  L  L    C  L++
Sbjct: 1270 SSLVTLSLGGNHFSRIPDGISQLYNLENLYLGHCKMLQHIPELPSGLFCLDAHHCTSLEN 1329

Query: 741  L 741
            L
Sbjct: 1330 L 1330



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 142/326 (43%), Gaps = 53/326 (16%)

Query: 411 PSNFKPKNLVELN-LRCSKVEQPWEGE--KACVPSSIQNFKY-LSALSFKGCQSLRSFPS 466
           PS    ++  E+N LR  K+  P      K  +P   + + Y L+ L + G   L S P 
Sbjct: 539 PSELTTESFKEMNRLRLLKIHNPRRKLFLKDHLPRDFEFYSYELAYLHWDG-YPLESLPM 597

Query: 467 NLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCK 526
           N H             NL+E          L L  S I++V    +    L V+DL    
Sbjct: 598 NFH-----------AKNLVE----------LSLRDSNIKQVWRGNKLHDKLRVIDLSHSV 636

Query: 527 RLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLP 586
            L RI   F  + +L  L L GC+NLE  P  + K +HL                     
Sbjct: 637 HLIRI-PDFSSVPNLEILTLEGCVNLELLPRGIYKWKHL--------------------- 674

Query: 587 GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
             + L    CSKL+  P+  G +  L  +  + +AI  LPSS+   N L++L    C  L
Sbjct: 675 --QTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKL 732

Query: 647 ESFPRTFLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
              P   +  LS++  L +    + E  IP +I +LSSL+ L L   +F S+P  I Q+S
Sbjct: 733 HQIP-NHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLS 791

Query: 705 QLRFIHLEDFNMLQSLPELPLCLKYL 730
           +L  ++L   N L+ +PELP  L+ L
Sbjct: 792 RLEVLNLSHCNNLEQIPELPSRLRLL 817



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 33/233 (14%)

Query: 429  VEQPWEGEKACV---------PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
            +E P E +  C+         PSSI  FK L+ LS  GC  L SFP              
Sbjct: 1100 IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFP-------------- 1145

Query: 480  YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
                  E  Q    + +LYL  +AI+E+PSSI+ L  L+ L LR CK L  +  S C L 
Sbjct: 1146 ------EILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLT 1199

Query: 540  SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPIT--ELPSSFENLPGLEVLFVEDCS 597
            S  TL++  C N    P+ L +++ L+ ++         +LP S   L  L  L ++ C+
Sbjct: 1200 SFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLP-SLSGLCSLRTLKLQGCN 1258

Query: 598  KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
             L   P  I  L  L  +    +  S++P  ++    L +L   HCK L+  P
Sbjct: 1259 -LREFPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLENLYLGHCKMLQHIP 1310



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 190/473 (40%), Gaps = 83/473 (17%)

Query: 597  SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
            S ++ +P     LE     L     ++ LPSS+     L +L  S C  LESFP      
Sbjct: 1092 SDMNEVPIIENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFP------ 1145

Query: 657  LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM 716
                           EI Q+   + SL  LYL+G   + +P+ I+++  L+++ L +   
Sbjct: 1146 ---------------EILQD---MESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKN 1187

Query: 717  LQSLPELPLC----LKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRS----LPELP-L 767
            L +LPE  +C     K L +  C     LP     L+SL+      L S    LP L  L
Sbjct: 1188 LVNLPE-SICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLPSLSGL 1246

Query: 768  C-LQYLNLEDCNMLRSLP-ELPLCLQLLTVR-NCNRLQSLPEILLCLQELDASVLEKLSK 824
            C L+ L L+ CN LR  P E+     L+T+    N    +P+ +  L  L+   L     
Sbjct: 1247 CSLRTLKLQGCN-LREFPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLENLYL----G 1301

Query: 825  HSPDLQWAPESLKSAAICFEFTNCLKL-NGKANNKILADSLLRIRHMAIASLRLGYEMAI 883
            H   LQ  PE L S   C +  +C  L N  + + +L  SL +     I           
Sbjct: 1302 HCKMLQHIPE-LPSGLFCLDAHHCTSLENLSSRSNLLWSSLFKCFKSQIQG--------- 1351

Query: 884  NEKLSELRGSLI--VLPGSEIPDWFSNQSSGSSICIQLP-PHSSCRNLIGFAFCAVLDSK 940
                 E R +LI  +   + IP+W S+Q SG  I ++LP       + +GF  C++    
Sbjct: 1352 ----REFRKTLITFIAESNGIPEWISHQKSGFKITMKLPWSWYENDDFLGFVLCSLCVPL 1407

Query: 941  KVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNS-RYIEDLIDSDRVILGFKPCL---- 995
            ++++   R F     FD +    S        Y S ++ E   D D    G   CL    
Sbjct: 1408 EIETKKHRCFNCKLNFDDDSAYFS--------YQSFQFCEFCYDEDASSQG---CLIYYP 1456

Query: 996  NVGFPDGYHHT-----IATFKFFAERKFYKIKRCGLCPVYANPSETKDNTFTI 1043
                P  YH        A F  +   K  K+ RCG   +YA+  E   N  TI
Sbjct: 1457 KSRIPKRYHSNEWRTLNAFFNVYFGVKPVKVARCGFHFLYAHDYE--QNNLTI 1507



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 93/402 (23%), Positives = 145/402 (36%), Gaps = 111/402 (27%)

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
           F ++P LE+L +E C  L+ LP  I   ++L                       ++L  +
Sbjct: 644 FSSVPNLEILTLEGCVNLELLPRGIYKWKHL-----------------------QTLSCN 680

Query: 642 HCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN-NFESLPAII 700
            C  LE FP      +  + +L +S  A+ ++P  I +L+ L+ L L        +P  I
Sbjct: 681 GCSKLERFPE-IKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHI 739

Query: 701 KQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLR 760
             +S L+ + L   N+++      +C    HL     LQ L +      S+  T   + R
Sbjct: 740 CHLSSLKELDLGHCNIMEGGIPSDIC----HL---SSLQKLNLEQGHFSSIPTTINQLSR 792

Query: 761 SLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLE 820
                   L+ LNL  CN L  +PELP  L+LL     NR  S    L            
Sbjct: 793 --------LEVLNLSHCNNLEQIPELPSRLRLLDAHGSNRTSSRALFL------------ 832

Query: 821 KLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYE 880
                          L S   CF +   LK          +DS  R              
Sbjct: 833 --------------PLHSLVNCFSWAQGLKRTS------FSDSSYRG------------- 859

Query: 881 MAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLPPHSSCRN-LIGFAFCAVLD 938
                     +G+ IVLP ++ IP+W  +++       +LP +    N  +GFA C V  
Sbjct: 860 ----------KGTCIVLPRTDGIPEWIMDRTKRYFTETELPQNWHQNNEFLGFALCCV-- 907

Query: 939 SKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIED 980
                       YV F ++ E     E+ H     ++   ED
Sbjct: 908 ------------YVPFAYESEDIPEKESAHGSKNESANKSED 937


>gi|357513781|ref|XP_003627179.1| NBS resistance protein [Medicago truncatula]
 gi|355521201|gb|AET01655.1| NBS resistance protein [Medicago truncatula]
          Length = 1236

 Score =  327 bits (838), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 261/781 (33%), Positives = 386/781 (49%), Gaps = 126/781 (16%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           VQI+G+WGMGG GKTTLA A+F + S ++EGSCF+  V   S+  G + +   ++LS  L
Sbjct: 226 VQIIGLWGMGGTGKTTLAAAMFQRVSFKYEGSCFLEKVTEVSKRHG-INYTCNKLLSKLL 284

Query: 67  SEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF-GQGSRIVVTTR 124
            E L++     IP     R++RMK  IV+DDV+    L+ LIG    + G GS ++VTTR
Sbjct: 285 REDLDIDTSKLIPSMIMRRLKRMKSFIVIDDVHNSELLQNLIGVGHGWLGSGSTVIVTTR 344

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           DK VL    G  +KIY V  +  + + + F   AF +    +     S+  V Y KGNPL
Sbjct: 345 DKHVL--ISGGIEKIYEVKKMNSQNSLQLFSLNAFGKVSPKDGYVELSKRAVDYAKGNPL 402

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L+VLGS L  K +  W   L  L  I  +EI  I+   ++S+N+L  + K IFLDIACF
Sbjct: 403 ALKVLGSLLRCKSEIEWDCALAKLKEIPNTEIDFIF---RLSYNELDDKEKDIFLDIACF 459

Query: 245 FEGEDKDFVASILDDSE--SDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESE 300
           F+G +++ +  IL++    +D+ +  L+DK+L+S+   N + MHD++QE G+QIVR+ES 
Sbjct: 460 FKGHERNRITKILNECGFFADIGISNLLDKALISVDFENCIQMHDLIQETGKQIVREESL 519

Query: 301 KEPGKRSRLWDPKEISRVLKHNK---------------------------------GTDA 327
           K PG+RSRL DPKE+  VLK+N+                                 G++ 
Sbjct: 520 KNPGQRSRLCDPKEVCNVLKNNRVRDALTCLPIHMIFIYKMQLPTEILTLRFTFLQGSEN 579

Query: 328 IEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLP 387
           +E IFLD ++   INL P +F  M NLRL  F                ++      + LP
Sbjct: 580 VESIFLDATEFTHINLRPESFEKMVNLRLLAF----------------QDNKGIKSINLP 623

Query: 388 NGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNF 447
           +GLD LP+ LRY  WD YPL++LPS F P+ LVEL+L+ S VE+ W G        + + 
Sbjct: 624 HGLDLLPENLRYFQWDGYPLQSLPSTFCPEMLVELSLKGSHVEKLWNG--------VLDL 675

Query: 448 KYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEV 507
             L  L   G +                        LIE P +SG     ++     E +
Sbjct: 676 PNLEILDLGGSK-----------------------KLIECPNVSGSPNLKHVILRYCESM 712

Query: 508 P---SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEH 564
           P   SSI  L  LEVL++  C  LK +S++ C   +L  L    C+NL+ F      ++ 
Sbjct: 713 PEVDSSIFLLQKLEVLNVFECTSLKSLSSNTCS-PALRKLEARDCINLKEFSVTFSSVDG 771

Query: 565 LKRIYS--DRTPITELPSSFENLPGLE--VLFVEDCSKLDNLPDNIGSLEYLYYILAAAS 620
           L    S  DR    ELPSS  +   L+  V  + DC  L +LP+N               
Sbjct: 772 LDLCLSEWDR---NELPSSILHKQNLKRFVFPISDC--LVDLPENFA------------- 813

Query: 621 AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
                   ++LS+     D       + F       +  +  ++I    + E P  I+ L
Sbjct: 814 ------DHISLSSPQNREDDPFITLDKLFSSPAFQSVKELTFIYIP--ILSEFPDSISLL 865

Query: 681 SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           SSL+ L L G +  SLP  IK + +L  + + D  M+QS+P L   +  L + +C+ L+ 
Sbjct: 866 SSLKSLTLDGMDIRSLPETIKYLPRLERVDVYDCKMIQSIPALSQFIPVLVVSNCESLEK 925

Query: 741 L 741
           +
Sbjct: 926 V 926


>gi|449443196|ref|XP_004139366.1| PREDICTED: LOW QUALITY PROTEIN: protein SUPPRESSOR OF npr1-1,
           CONSTITUTIVE 1-like [Cucumis sativus]
          Length = 1253

 Score =  327 bits (837), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 245/748 (32%), Positives = 378/748 (50%), Gaps = 101/748 (13%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTTLAKA++++ +++FEG CF+S+VR  S+   GL  LQ+++L   L   L++   +   
Sbjct: 232 KTTLAKALYNKIANQFEGFCFLSNVRETSKQFNGLVQLQEKLLYEILKFDLKIGNLD--- 288

Query: 80  FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKI 139
                     +LIVLDDV+++ QL+ L+GE D FG GS+I+VTTR+  +L     +EK  
Sbjct: 289 ---------XVLIVLDDVDKLKQLEALVGERDWFGHGSKIIVTTRNSHLLSSHEFDEK-- 337

Query: 140 YRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKS 199
           Y V  L    + E F   AFK++H   +    S+   +Y KG+PL L VLGS LC + + 
Sbjct: 338 YGVRELSHGHSLELFSWHAFKKSHPSSNYLDLSKRATNYCKGHPLALVVLGSFLCTRDQI 397

Query: 200 HWGKVLHDL-NRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
            W  +L +  N + E    DI  I++ISF+ L  ++K IFLDI+C F GE  ++V S+L+
Sbjct: 398 KWRTILDEFENSLSE----DIEHIIQISFDGLEEKIKEIFLDISCLFVGEKVNYVKSVLN 453

Query: 259 DSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRV 318
             +                            MG++IV  ES  EPGKRSRLW   ++ +V
Sbjct: 454 TCQ----------------------------MGQKIVNGESF-EPGKRSRLWLVHDVLKV 484

Query: 319 LKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQ 378
              N GT A++ I LDLS    +++D RAF NM NLRL      +F              
Sbjct: 485 FADNSGTIAVKAIKLDLSNPTRLDVDSRAFRNMKNLRLLIVRNARF-------------- 530

Query: 379 LSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA 438
                      ++YLP  L+++ W  +  R LP +F  KNLV L+LR S +    +G K 
Sbjct: 531 --------STNVEYLPDNLKWIKWHGFSHRFLPLSFLKKNLVGLDLRHSLIRNLGKGFKV 582

Query: 439 CVPSSIQNFKY---------------LSALSFKGCQSLRSFPSNLHFVCP-VTINFSYCV 482
            +     +  Y               L  L    C +LR+ P ++  +   +T++  +C 
Sbjct: 583 IIYLPHVDLSYSSLLEKIPDFPATSNLEELYLNNCTNLRTIPKSVVSLGKLLTLDLDHCS 642

Query: 483 NLIEFPQI----SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
           NLI+ P      S KV +L   +  +E++P      ++LE L L+ C  L+ I  S   L
Sbjct: 643 NLIKLPSYLMLKSLKVLKLAYCKK-LEKLP-DFSTASNLEKLYLKECTNLRMIHDSIGSL 700

Query: 539 RSLVTLILLGCLNLEHFPE--ILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
             LVTL L  C NLE  P    L+ +E+L   +  +  + E+P  F +   L+ L++E C
Sbjct: 701 SKLVTLDLGKCSNLEKLPSYLTLKSLEYLNLAHCKK--LEEIP-DFSSALNLKSLYLEQC 757

Query: 597 SKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
           + L  + ++IGSL  L  + L   + + +LPS + L + LR  + S C  LE FP+    
Sbjct: 758 TNLRVIHESIGSLNSLVTLDLRQCTNLEKLPSYLKLKS-LRHFELSGCHKLEMFPK-IAE 815

Query: 656 GLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDF 714
            + ++  LH+   A+RE+P  I YL++L +L L G  N  SLP+ I  +  L  + L + 
Sbjct: 816 NMKSLISLHLDSTAIRELPSSIGYLTALLVLNLHGCTNLISLPSTIYLLMSLWNLQLRNC 875

Query: 715 NMLQSLPELPLCLKYLHLIDCKMLQSLP 742
             LQ +P LP C++ +    C +L   P
Sbjct: 876 KFLQEIPNLPHCIQKMDATGCTLLGRSP 903


>gi|356522390|ref|XP_003529829.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1086

 Score =  327 bits (837), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 223/593 (37%), Positives = 322/593 (54%), Gaps = 65/593 (10%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPN-I 77
           KTT+A+ ++++   E+EG CF++++R  S   G +  L+K++ ST L E+ L++  PN +
Sbjct: 260 KTTIAQEVYNKLCFEYEGCCFLANIREESGRHGIIS-LKKKLFSTLLGEEDLKIDTPNGL 318

Query: 78  PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
           P + + R+RR+K+LI+LDDVN+  QL+ L G  D FG GSRI++TTRDK+VL K   E  
Sbjct: 319 PQYVERRLRRIKVLIILDDVNDSEQLEILAGTRDWFGLGSRIIITTRDKQVLAK---ESA 375

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
            IY V  L F+E+   F   AFKE H   + +  S+ VV+Y +G PLVL+VLG  L  K 
Sbjct: 376 NIYEVETLNFDESLRLFNLNAFKEVHLEREYHELSKKVVNYAQGIPLVLKVLGHLLHGKE 435

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGED--KDFVAS 255
           K  W   L  L ++   ++HDI   +K+S+N L    K IFLDIACFF+G +   + +  
Sbjct: 436 KEIWESQLERLKKVQSKKVHDI---IKLSYNDLDQDEKKIFLDIACFFDGLNLKVNKIKI 492

Query: 256 ILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
           +L D +  V   L+ L DK+L+S+S  N + MH+I+QE   QI RQES ++P  +SRL D
Sbjct: 493 LLKDHDYSVAAGLERLKDKALISVSQENIVTMHNIIQETAWQIARQESIEDPRSQSRLLD 552

Query: 312 PKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
           P ++  VLK+NKG +AI  I ++LS IK + L+P+ F  MS L    FY        K  
Sbjct: 553 PDDVYLVLKYNKGNEAIRSIVINLSGIKQLQLNPQVFAKMSKLYFLDFY-------NKGS 605

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
                EQ     + LP GL+ L  +LRYL W  YPL +LPS F  +NLVELNL  S+V++
Sbjct: 606 CSCLREQ---GGLYLPQGLESLSNELRYLRWTHYPLESLPSKFSAENLVELNLPYSRVKK 662

Query: 432 PWEG------------------------EKAC---------------VPSSIQNFKYLSA 452
            W+                          KA                V  S+ + K L  
Sbjct: 663 LWQAVPDLVNMRILILHSSTQLKELPDLSKATNLKVMDLRFCVGLTSVHPSVFSLKKLEK 722

Query: 453 LSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIE 512
           L   GC SLRS  SN+H      ++   C++L  F   S  + RL L  ++I+++PSSI 
Sbjct: 723 LYLGGCFSLRSLRSNIHLDSLRYLSLYGCMSLKYFSVTSKNMVRLNLELTSIKQLPSSIG 782

Query: 513 CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHL 565
             + LE L L     ++ + TS   L  L  L +  C  L   PE+   +E L
Sbjct: 783 LQSKLEKLRL-AYTYIENLPTSIKHLTKLRHLDVRHCRELRTLPELPPSLETL 834



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 181/443 (40%), Gaps = 89/443 (20%)

Query: 519 VLDLRGCKRLKRISTSFCKLRSLVTLILLG-----CLNLE---HFPEILEKMEH-LKRIY 569
           V++L G K+L+     F K+  L  L         CL  +   + P+ LE + + L+ + 
Sbjct: 573 VINLSGIKQLQLNPQVFAKMSKLYFLDFYNKGSCSCLREQGGLYLPQGLESLSNELRYLR 632

Query: 570 SDRTPITELPSSF--ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPS 627
               P+  LPS F  ENL  L + +         +PD + ++  L  IL +++ + +LP 
Sbjct: 633 WTHYPLESLPSKFSAENLVELNLPYSRVKKLWQAVPDLV-NMRIL--ILHSSTQLKELPD 689

Query: 628 SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
               +N L+ +D   C GL S              +H S +++++          LE LY
Sbjct: 690 LSKATN-LKVMDLRFCVGLTS--------------VHPSVFSLKK----------LEKLY 724

Query: 688 LSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQ--SLPELPLCLKYLHLIDCKMLQSLPVL 744
           L G  +  SL + I  +  LR++ L     L+  S+    +    L L   K L S   L
Sbjct: 725 LGGCFSLRSLRSNI-HLDSLRYLSLYGCMSLKYFSVTSKNMVRLNLELTSIKQLPSSIGL 783

Query: 745 PFCLESLDLTGC---NMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRL 801
              LE L L      N+  S+  L   L++L++  C  LR+LPELP  L+ L  R C  L
Sbjct: 784 QSKLEKLRLAYTYIENLPTSIKHLT-KLRHLDVRHCRELRTLPELPPSLETLDARGCVSL 842

Query: 802 QSL--PEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKI 859
           +++  P                          A E LK       F NCLKL+  +   I
Sbjct: 843 ETVMFPST------------------------AGEQLKENKKRVAFWNCLKLDEHSLKAI 878

Query: 860 LADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGS-----S 914
             ++  +I  M  A   L           +      V PGS++P+W  +++         
Sbjct: 879 ELNA--QINMMKFAHQHLS-------TFGDAHQGTYVYPGSKVPEWLVHKTIQRDYVTID 929

Query: 915 ICIQLPPHSSCRNLIGFAFCAVL 937
           +   L PHSS  + +GF F  V+
Sbjct: 930 LSFVLAPHSS--DHLGFIFGFVV 950


>gi|105922786|gb|ABF81437.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1289

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 255/719 (35%), Positives = 377/719 (52%), Gaps = 73/719 (10%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGP-NIP 78
            KTT+A+ ++D+   +FEGSCF+++VR       G   LQ+Q+LS  L E+  V       
Sbjct: 352  KTTVARVLYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEILMERASVWDSYRGI 411

Query: 79   HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
               K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+RD  V+     ++ K
Sbjct: 412  EMIKRRLRLKKILLILDDVDDKKQLEFLAEEPGWFGPGSRIIITSRDTNVITG--NDDTK 469

Query: 139  IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            IY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV+GS L  +  
Sbjct: 470  IYEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFLYGRSI 529

Query: 199  SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
              W   ++ +N I + +I    D+L+ISF+ L    K IFLDIACF +G  KD +  ILD
Sbjct: 530  PEWRGAINRMNEIPDCKI---IDVLRISFDGLHESDKKIFLDIACFLKGFKKDRIIRILD 586

Query: 259  DSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                       +LI+KSL+S+S + + MH++LQ MG++IVR ES +EPG+RSRLW  +++
Sbjct: 587  SCGFHAHIGTQVLIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDV 646

Query: 316  SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
               L  N G + IE IFLD+  IK    +  AF+ MS LRL K                 
Sbjct: 647  CLALMDNTGKEKIEAIFLDMPGIKESQWNIEAFSKMSRLRLLKI---------------- 690

Query: 376  EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
                  + VQL  G + L  KL++L W +YP ++LP   +   LVEL++  S +EQ W G
Sbjct: 691  ------NNVQLSEGPEDLSNKLQFLEWHSYPSKSLPVGLQVDQLVELHMANSNLEQLWYG 744

Query: 436  EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG--K 493
             K+ V     N K                           IN S  + L + P ++G   
Sbjct: 745  CKSAV-----NLK--------------------------IINLSNSLYLTKTPDLTGIPN 773

Query: 494  VTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
            +  L L G +++ EV  S+     L+ ++L  CK + RI  +  ++ SL   IL GC  L
Sbjct: 774  LESLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSI-RILPNNLEMGSLKVCILDGCSKL 832

Query: 553  EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
            E FP+I+  M+ L  +  D T IT+L SS  +L GL +L +  C  L+++P +IG L+ L
Sbjct: 833  EKFPDIVGNMKCLMVLRLDGTGITKLSSSMHHLIGLGLLSMNSCKNLESIPSSIGCLKSL 892

Query: 613  YYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF----LLGLSAMGLLHISD 667
              + L+  S +  +P  +     L   D+     L+ F R      L GL ++ +L +  
Sbjct: 893  KKLDLSGCSELKYIPEKLGEVESLEEFDNLKVLSLDGFKRIVMPPSLSGLCSLEVLGLCA 952

Query: 668  YAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
              +RE  +P++I  LSSL  L LS NNF SLP  I Q+ +L  + LED  ML+SLP++P
Sbjct: 953  CNLREGALPEDIGCLSSLRSLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLESLPKVP 1011



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 88/386 (22%), Positives = 153/386 (39%), Gaps = 70/386 (18%)

Query: 561  KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAAS 620
            +++ L  ++   + + +L    ++   L+++ + +   L   PD  G       IL   +
Sbjct: 724  QVDQLVELHMANSNLEQLWYGCKSAVNLKIINLSNSLYLTKTPDLTGIPNLESLILEGCT 783

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
            ++S++  S+A    L+ ++  +CK +   P    +G   + +L      + + P  +  +
Sbjct: 784  SLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNLEMGSLKVCILDGCS-KLEKFPDIVGNM 842

Query: 681  SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID---CKM 737
              L +L L G     L + +  +  L  + +     L+S+P    CLK L  +D   C  
Sbjct: 843  KCLMVLRLDGTGITKLSSSMHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSE 902

Query: 738  LQSLPVLPFCLESLD---------LTGCNMLRSLPELP-LC-LQYLNLEDCNMLR-SLPE 785
            L+ +P     +ESL+         L G   +   P L  LC L+ L L  CN+   +LPE
Sbjct: 903  LKYIPEKLGEVESLEEFDNLKVLSLDGFKRIVMPPSLSGLCSLEVLGLCACNLREGALPE 962

Query: 786  LPLCLQLLTVRNC--NRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICF 843
               CL  L   +   N   SLP+ +  L EL+  VLE                     C 
Sbjct: 963  DIGCLSSLRSLDLSQNNFVSLPKSINQLFELEMLVLED--------------------CT 1002

Query: 844  EFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIP 903
               +  K+  K                 +++ R G+ +AI              PG+EIP
Sbjct: 1003 MLESLPKVPSKV-------------QTGLSNPRPGFGIAI--------------PGNEIP 1035

Query: 904  DWFSNQ-----SSGSSICIQLPPHSS 924
             WF++Q       GS   I+L  HSS
Sbjct: 1036 GWFNHQKLQEWQHGSFSNIELSFHSS 1061


>gi|105922482|gb|ABF81419.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1121

 Score =  326 bits (836), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 256/765 (33%), Positives = 376/765 (49%), Gaps = 124/765 (16%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+A++++    FEGS F+++VR   E   GL  LQ+Q+LS TL ++          
Sbjct: 227 KTTIARAVYEKMLGHFEGSSFLANVR-EVEEKHGLVRLQEQLLSDTLMDRRTKISDVHRG 285

Query: 80  FTKERVR---RMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
             + RVR   RM +L+VLDDV+++ QL+ L+G+ + F  GSR+++TTRD+ +L++F  + 
Sbjct: 286 MNEIRVRLRSRM-VLVVLDDVDQLVQLESLVGDRNWFDNGSRVIITTRDELLLKQFGVD- 343

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
            KIYRV  L   EA + FC  AF+    PED    +  VV Y  G PL L VLGS     
Sbjct: 344 -KIYRVASLNNIEAVQLFCLKAFRSYCPPEDYVLQTIQVVKYADGLPLALHVLGSFFSGI 402

Query: 197 RKSH-WGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           R    W    H L R+ +     I D LKISF+ L    K IFLDIACFF G ++D V  
Sbjct: 403 RSVELWN---HSLKRLKDIPDKGILDKLKISFDGLNEVEKKIFLDIACFFNGWEEDCVTK 459

Query: 256 ILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLW-- 310
           +++ S       + IL++K L++IS N + MHD+LQEMGRQIV++ES +EPGKR+RLW  
Sbjct: 460 LMESSGFYPQIGIRILVEKFLINISDNRVWMHDLLQEMGRQIVKRESHEEPGKRTRLWLC 519

Query: 311 ---------------------------DPKEISRVLKHN---KGTDAIEGIFLDLS-KIK 339
                                       P   S  L  N   +GTD +EGI L+ + ++ 
Sbjct: 520 EDVIHVLLNNTVNNLLLQPQFYVSDFEFPFSCSSFLFINFTVQGTDKVEGIVLNSNDEVD 579

Query: 340 GINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRY 399
           G+ L   +   M  LR+ K                         + L   + YL  +LRY
Sbjct: 580 GLYLSAESIMKMKRLRILKL----------------------QNINLSQEIKYLSNELRY 617

Query: 400 LHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQ 459
           L W  YP ++LPS F+P  LVEL++R S ++Q WEG            K L A+  +  +
Sbjct: 618 LEWCRYPFKSLPSTFQPDKLVELHMRHSSIKQLWEGP----------LKLLRAIDLRHSR 667

Query: 460 SLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEV 519
           +L   P          +N   C  L+                    ++  SI  L  L  
Sbjct: 668 NLIKTPDFRQVPNLEKLNLEGCRKLV--------------------KIDDSIGILKGLVF 707

Query: 520 LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP 579
           L+L+ C +L  + T+ C+L++L  L L GC  LE  PE+L  + +L+ +   RT IT+LP
Sbjct: 708 LNLKDCVKLACLPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLEELDVGRTAITQLP 767

Query: 580 SSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
           S+F     L+VL  + C          G     +Y L +  ++ + P  + L     S  
Sbjct: 768 STFGLWKKLKVLSFDGCK---------GPAPKSWYSLFSFRSLPRNPCPITLMLSSLSTL 818

Query: 640 SSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAI 699
            S  K          L LS   L+        E+P +++   SLE L L GNNF  +P+ 
Sbjct: 819 YSLTK----------LNLSNCNLME------GELPDDMSCFPSLEELDLIGNNFVRIPSS 862

Query: 700 IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
           I ++S+L+ + L +   LQSLP+LP  L+YL +  C  L +LP L
Sbjct: 863 ISRLSKLKSLRLGNCKKLQSLPDLPSRLEYLGVDGCASLGTLPNL 907



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 159/401 (39%), Gaps = 103/401 (25%)

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDS 640
           F  +P LE L +E C KL  + D+IG L+ L ++ L     ++ LP+++     LR L+ 
Sbjct: 675 FRQVPNLEKLNLEGCRKLVKIDDSIGILKGLVFLNLKDCVKLACLPTNICELKTLRILNL 734

Query: 641 SHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAII 700
             C  LE  P   L  +  +  L +   A+ ++P        L++L   G      PA  
Sbjct: 735 YGCFKLEKLPE-MLGNVINLEELDVGRTAITQLPSTFGLWKKLKVLSFDGCKG---PAPK 790

Query: 701 KQMSQLRFIHLEDFNMLQSLPELPLCLKY-------------LHLIDCKMLQS-LPVLPF 746
              S   F         +SLP  P  +               L+L +C +++  LP    
Sbjct: 791 SWYSLFSF---------RSLPRNPCPITLMLSSLSTLYSLTKLNLSNCNLMEGELPDDMS 841

Query: 747 C---LESLDLTGCNMLR---SLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNR 800
           C   LE LDL G N +R   S+  L   L+ L L +C  L+SLP+LP  L+ L V  C  
Sbjct: 842 CFPSLEELDLIGNNFVRIPSSISRLSK-LKSLRLGNCKKLQSLPDLPSRLEYLGVDGCAS 900

Query: 801 LQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKIL 860
           L +LP +                          E  +S  +   F NC            
Sbjct: 901 LGTLPNLF------------------------EECARSKFLSLIFMNC------------ 924

Query: 861 ADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLP 920
                                    +L++ +G++ +  GSEIP WF ++S G S+ I+L 
Sbjct: 925 ------------------------SELTDYQGNISM--GSEIPSWFHHKSVGHSLTIRLL 958

Query: 921 P--HSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLE 959
           P  H S    +G A CA  +    + DC     ++  FD++
Sbjct: 959 PYEHWSSSKWMGLAVCAFFE----ELDCGDSCLITLNFDIK 995


>gi|186511687|ref|NP_001118968.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|29839687|sp|Q9SZ67.1|WRK19_ARATH RecName: Full=Probable WRKY transcription factor 19; AltName:
            Full=WRKY DNA-binding protein 19
 gi|4586107|emb|CAB40943.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7267903|emb|CAB78245.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332657685|gb|AEE83085.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1895

 Score =  326 bits (835), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 241/654 (36%), Positives = 333/654 (50%), Gaps = 104/654 (15%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V+ +GIWG  GIGKTT+A+ IF + S ++E    + D+    E  G        +    L
Sbjct: 837  VRSIGIWGTVGIGKTTIAEEIFRKISVQYETCVVLKDLHKEVEVKG-----HDAVRENFL 891

Query: 67   SEKLEVAGPNIPH----------FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            SE LEV     PH          F + R++R ++L++LDDVN+   +   +G L+ FG G
Sbjct: 892  SEVLEVE----PHVIRISDIKTSFLRSRLQRKRILVILDDVNDYRDVDTFLGTLNYFGPG 947

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAF----EHFCNFAFKENHCPEDLNWHS 172
            SRI++T+R++RV    + +   +Y V  L+  ++        C         PE     S
Sbjct: 948  SRIIMTSRNRRVFVLCKIDH--VYEVKPLDIPKSLLLLDRGTCQIVLS----PEVYKTLS 1001

Query: 173  RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
              +V ++ GNP VL+ L S   + R+  W K+  ++     S I+ I  I + S   L  
Sbjct: 1002 LELVKFSNGNPQVLQFLSS---IDRE--WNKLSQEVKTT--SPIY-IPGIFEKSCCGLDD 1053

Query: 233  RVKSIFLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISG-NFLNMHDILQ 288
              + IFLDIACFF   DKD VA +LD    S       L+DKSL++IS  N ++M   +Q
Sbjct: 1054 NERGIFLDIACFFNRIDKDNVAMLLDGCGFSAHVGFRGLVDKSLLTISQHNLVDMLSFIQ 1113

Query: 289  EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
              GR+IVRQES   PG RSRLW+   I  V  ++ GT AIEGIFLD+  +K  + +P  F
Sbjct: 1114 ATGREIVRQESADRPGDRSRLWNADYIRHVFINDTGTSAIEGIFLDMLNLK-FDANPNVF 1172

Query: 349  TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
              M NLRL K Y  K            EE+     V  P GL+YLP KLR LHW+ YPL 
Sbjct: 1173 EKMCNLRLLKLYCSK-----------AEEK---HGVSFPQGLEYLPSKLRLLHWEYYPLS 1218

Query: 409  TLPSNFKPKNLVELNLRCSKVEQPWEGEKA--C----------------------VP--S 442
            +LP +F P+NLVELNL  S  ++ W+G+KA  C                      +P  S
Sbjct: 1219 SLPKSFNPENLVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLS 1278

Query: 443  SIQNF---------------------KYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC 481
            S  N                      K L  L+ KGC  L + PS +       +N S C
Sbjct: 1279 SATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNLSGC 1338

Query: 482  VNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSL 541
              L  FP+IS  V  LY+G + I+E+PSSI+ L  LE LDL   + LK + TS  KL+ L
Sbjct: 1339 SKLGNFPEISPNVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHL 1398

Query: 542  VTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL-EVLFVE 594
             TL L GC++LE FP+   +M+ L+ +   RT I ELPSS   L  L E+LFV+
Sbjct: 1399 ETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTALDELLFVD 1452



 Score = 45.1 bits (105), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 57/241 (23%)

Query: 559  LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LA 617
            LEK++ ++  YSD+  +T++P    +   LE + +E C+ L +L  +I  L+ L ++ L 
Sbjct: 1257 LEKLKKMRLSYSDQ--LTKIPR-LSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLK 1313

Query: 618  AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI 677
              S +  +PS V L + L  L+ S C  L +FP                         EI
Sbjct: 1314 GCSKLENIPSMVDLES-LEVLNLSGCSKLGNFP-------------------------EI 1347

Query: 678  AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM 737
            +   +++ LY+ G   + +P+ IK +  L  + LE+   L++LP     LK+        
Sbjct: 1348 S--PNVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKH-------- 1397

Query: 738  LQSLPVLPFCLESLDLTGCNMLRSLPELPL---CLQYLNLEDCNMLRSLPELPLCLQLLT 794
                      LE+L+L+GC  L   P+      CL++L+L   +    + ELP  +  LT
Sbjct: 1398 ----------LETLNLSGCISLERFPDSSRRMKCLRFLDLSRTD----IKELPSSISYLT 1443

Query: 795  V 795
             
Sbjct: 1444 A 1444


>gi|238480299|ref|NP_001154222.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|332657686|gb|AEE83086.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1879

 Score =  326 bits (835), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 241/654 (36%), Positives = 333/654 (50%), Gaps = 104/654 (15%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V+ +GIWG  GIGKTT+A+ IF + S ++E    + D+    E  G        +    L
Sbjct: 837  VRSIGIWGTVGIGKTTIAEEIFRKISVQYETCVVLKDLHKEVEVKG-----HDAVRENFL 891

Query: 67   SEKLEVAGPNIPH----------FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            SE LEV     PH          F + R++R ++L++LDDVN+   +   +G L+ FG G
Sbjct: 892  SEVLEVE----PHVIRISDIKTSFLRSRLQRKRILVILDDVNDYRDVDTFLGTLNYFGPG 947

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAF----EHFCNFAFKENHCPEDLNWHS 172
            SRI++T+R++RV    + +   +Y V  L+  ++        C         PE     S
Sbjct: 948  SRIIMTSRNRRVFVLCKIDH--VYEVKPLDIPKSLLLLDRGTCQIVLS----PEVYKTLS 1001

Query: 173  RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
              +V ++ GNP VL+ L S   + R+  W K+  ++     S I+ I  I + S   L  
Sbjct: 1002 LELVKFSNGNPQVLQFLSS---IDRE--WNKLSQEVKTT--SPIY-IPGIFEKSCCGLDD 1053

Query: 233  RVKSIFLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISG-NFLNMHDILQ 288
              + IFLDIACFF   DKD VA +LD    S       L+DKSL++IS  N ++M   +Q
Sbjct: 1054 NERGIFLDIACFFNRIDKDNVAMLLDGCGFSAHVGFRGLVDKSLLTISQHNLVDMLSFIQ 1113

Query: 289  EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
              GR+IVRQES   PG RSRLW+   I  V  ++ GT AIEGIFLD+  +K  + +P  F
Sbjct: 1114 ATGREIVRQESADRPGDRSRLWNADYIRHVFINDTGTSAIEGIFLDMLNLK-FDANPNVF 1172

Query: 349  TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
              M NLRL K Y  K            EE+     V  P GL+YLP KLR LHW+ YPL 
Sbjct: 1173 EKMCNLRLLKLYCSK-----------AEEK---HGVSFPQGLEYLPSKLRLLHWEYYPLS 1218

Query: 409  TLPSNFKPKNLVELNLRCSKVEQPWEGEKA--C----------------------VP--S 442
            +LP +F P+NLVELNL  S  ++ W+G+KA  C                      +P  S
Sbjct: 1219 SLPKSFNPENLVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLS 1278

Query: 443  SIQNF---------------------KYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC 481
            S  N                      K L  L+ KGC  L + PS +       +N S C
Sbjct: 1279 SATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNLSGC 1338

Query: 482  VNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSL 541
              L  FP+IS  V  LY+G + I+E+PSSI+ L  LE LDL   + LK + TS  KL+ L
Sbjct: 1339 SKLGNFPEISPNVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHL 1398

Query: 542  VTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL-EVLFVE 594
             TL L GC++LE FP+   +M+ L+ +   RT I ELPSS   L  L E+LFV+
Sbjct: 1399 ETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTALDELLFVD 1452



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 57/241 (23%)

Query: 559  LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LA 617
            LEK++ ++  YSD+  +T++P    +   LE + +E C+ L +L  +I  L+ L ++ L 
Sbjct: 1257 LEKLKKMRLSYSDQ--LTKIPR-LSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLK 1313

Query: 618  AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI 677
              S +  +PS V L + L  L+ S C  L +FP                         EI
Sbjct: 1314 GCSKLENIPSMVDLES-LEVLNLSGCSKLGNFP-------------------------EI 1347

Query: 678  AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM 737
            +   +++ LY+ G   + +P+ IK +  L  + LE+   L++LP     LK+        
Sbjct: 1348 S--PNVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKH-------- 1397

Query: 738  LQSLPVLPFCLESLDLTGCNMLRSLPELPL---CLQYLNLEDCNMLRSLPELPLCLQLLT 794
                      LE+L+L+GC  L   P+      CL++L+L   +    + ELP  +  LT
Sbjct: 1398 ----------LETLNLSGCISLERFPDSSRRMKCLRFLDLSRTD----IKELPSSISYLT 1443

Query: 795  V 795
             
Sbjct: 1444 A 1444


>gi|357462141|ref|XP_003601352.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355490400|gb|AES71603.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1545

 Score =  326 bits (835), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 239/695 (34%), Positives = 364/695 (52%), Gaps = 76/695 (10%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S+ V+ +G+WGMGGIGKTTLAK ++ +   +FE  CF+ +VR  S T  GL   + ++ S
Sbjct: 651  SNDVRSLGLWGMGGIGKTTLAKDLYAKLCSQFERHCFLENVREES-TGHGLNGSRNKLFS 709

Query: 64   TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
            T L    +      P F + R+   K L VLDDV  + Q++ L  +    G GSRI+VTT
Sbjct: 710  TLLGIPRDAPYVETPIF-RRRLACEKSLTVLDDVTTLEQVEILNIDNICLGPGSRIIVTT 768

Query: 124  RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
            RDK++  +F   E  IY V GL  +E+ E FC  AF+E +        S+  + Y  GNP
Sbjct: 769  RDKQICNQFN--ECAIYEVEGLNEDESLEVFCLEAFREKYPKIGYRGLSKRAIGYCGGNP 826

Query: 184  LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
            L L+VLG++   K K  W   L  L +I    IHD+   LK+SF+ L    + IFLDIAC
Sbjct: 827  LALKVLGANFRTKSKEAWESELEKLKKIPNGRIHDV---LKLSFDDLDRTQQEIFLDIAC 883

Query: 244  FFEGE-----DKDFVASILDDSE---SDVLDILIDKSLVSISG-NFLNMHDILQEMGRQI 294
            FF  E      +D + ++L+         +++L+ K+L++I   + + MHD+L EMGR+I
Sbjct: 884  FFNLELHACFGRDEITTLLNACNFFAVSGIEVLLYKALLTIEHYDQVTMHDLLVEMGREI 943

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            VR+ES K+PG RSRLWDPKE+  +LK+NKGT+ +E IF D+     + L   +F +M+NL
Sbjct: 944  VRKESLKDPGSRSRLWDPKEVYDLLKYNKGTEVVEVIFFDICDFGDLYLSSASFKSMTNL 1003

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            R    Y+     +  +    T  +   S V L  GL++L  KLRYL W+++PL +LP++F
Sbjct: 1004 R----YLHILNSLHNI--FLTNGRNEGSIVHLHEGLEWLSDKLRYLKWESFPLNSLPASF 1057

Query: 415  KPKNLVELNLRCSKVEQPWEG--------------------------------------E 436
              +NLV+L++  SK+++ W+G                                      E
Sbjct: 1058 CAENLVQLSMTNSKLKKLWDGIQKLDNLMKIELDYSKDLVEIPDLSRAPNLELVSLSYCE 1117

Query: 437  KAC-VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT 495
              C +  SI     LS L   GC+ ++S  +N+H     +++ + C +L+EF   S  +T
Sbjct: 1118 NLCKLHESILTAPKLSYLRLDGCKKIKSLKTNIHSKSLESLSLNNCSSLVEFSVTSENMT 1177

Query: 496  RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK---LRSLVTLILLGC--- 549
             LYL  +AI+E+PSS+     L  L+L  CK+L     +      L SL+   L GC   
Sbjct: 1178 GLYLSCTAIQELPSSMWRNRKLTHLNLSKCKKLNIAEKNLPNDPGLESLIFCDLSGCTQI 1237

Query: 550  --LNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
               NL      +  ++HL+ +  +   +  LP + +N+  LE L +++C KL  +P    
Sbjct: 1238 NTWNLWFIFHFIRSVKHLRMV--NCCNLESLPDNIQNISMLEWLCLDECRKLKFIPKLPV 1295

Query: 608  SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSH 642
            SL      L+AA+ I     SV  S ML ++   H
Sbjct: 1296 SLRN----LSAANCIYVDTGSVQRS-MLENMIQRH 1325



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 128/558 (22%), Positives = 221/558 (39%), Gaps = 114/558 (20%)

Query: 554  HFPEILEKM-EHLKRIYSDRTPITELPSSF--ENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
            H  E LE + + L+ +  +  P+  LP+SF  ENL  L +      SKL  L D I  L+
Sbjct: 1028 HLHEGLEWLSDKLRYLKWESFPLNSLPASFCAENLVQLSMT----NSKLKKLWDGIQKLD 1083

Query: 611  YLYYI-LAAASAISQLPSSVALSNM-LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY 668
             L  I L  +  + ++P      N+ L SL  S+C+ L     + L   +A  L ++   
Sbjct: 1084 NLMKIELDYSKDLVEIPDLSRAPNLELVSL--SYCENLCKLHESIL---TAPKLSYLRLD 1138

Query: 669  AVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC-- 726
              ++I      + S  +  LS NN  SL         +  ++L       ++ ELP    
Sbjct: 1139 GCKKIKSLKTNIHSKSLESLSLNNCSSLVEFSVTSENMTGLYLS----CTAIQELPSSMW 1194

Query: 727  ----LKYLHLIDCKML----QSLPVLPFCLESL---DLTGCNMLRS-----LPELPLCLQ 770
                L +L+L  CK L    ++LP  P  LESL   DL+GC  + +     +      ++
Sbjct: 1195 RNRKLTHLNLSKCKKLNIAEKNLPNDP-GLESLIFCDLSGCTQINTWNLWFIFHFIRSVK 1253

Query: 771  YLNLEDCNMLRSLPELPL---CLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSP 827
            +L + +C  L SLP+       L+ L +  C +L+ +P++ + L+ L A+          
Sbjct: 1254 HLRMVNCCNLESLPDNIQNISMLEWLCLDECRKLKFIPKLPVSLRNLSAA---------- 1303

Query: 828  DLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKL 887
                               NC+ ++  +  + + +++++ RH+     R           
Sbjct: 1304 -------------------NCIYVDTGSVQRSMLENMIQ-RHLTNFRDR----------- 1332

Query: 888  SELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCF 947
            S        LPG +IP  F  QS+ +SI I   P S   +L    FC +       S+  
Sbjct: 1333 SNCFQEFFFLPGDQIPCEFYFQSTEASIVIPPIPKS---DLCCLIFCIIF------SEGL 1383

Query: 948  RYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVIL----GFKPCLNVGFPDGY 1003
             +FY +    +  +   E    D  + +   E  + SD V++     +   + +G   G 
Sbjct: 1384 TFFYNNLCCTI-YQHKKEVHQWDTNWGN---ERTLFSDHVLIICWCHYNKLVELGSERGS 1439

Query: 1004 HHTIATFKFFAER---------KFYKIKRCGLCPVY----ANPSETKDNTFTINFATEVW 1050
                 TF+F  +              IK CG+ PVY       S ++  T  I    ++ 
Sbjct: 1440 DDYNLTFEFKLKEYVDDEEQWSTIEGIKGCGVFPVYDLGLDGSSSSRFETVEIESGVQI- 1498

Query: 1051 KLDDLPSASGTLDVEELE 1068
               D        D++EL+
Sbjct: 1499 --SDESDQHSNFDIDELQ 1514


>gi|255547494|ref|XP_002514804.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223545855|gb|EEF47358.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1082

 Score =  326 bits (835), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 269/793 (33%), Positives = 394/793 (49%), Gaps = 93/793 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           SD V+ VGI GMGGIGKTT+A+A++ + S EFEGSCF+++VR   E    L  LQ+Q+LS
Sbjct: 208 SDDVRFVGICGMGGIGKTTIARAVYAELSSEFEGSCFLANVR-EVEEKNSLS-LQEQLLS 265

Query: 64  TTLSE-KLEV----AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            TL E K+ V    AG N     K R+   K+LI+LDDVN + QLK L G  D FG GSR
Sbjct: 266 ETLMERKITVWDIHAGRNE---IKNRLSHKKVLIILDDVNHLEQLKSLAGMSDWFGNGSR 322

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I++TTRD+ +L    G E+ IYRV GL  +EA   F   AFK ++  +D    S   V+Y
Sbjct: 323 IIITTRDEHLL-LCHGVER-IYRVGGLNHDEALRLFSLKAFKNDYPADDYVELSNHFVNY 380

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL L+VLGS L  +  + W   L   +R+ E     I D L ISF  L    K +F
Sbjct: 381 ANGLPLALDVLGSCLYGRSINEWQSAL---DRLKEIPNKRILDKLYISFEGLQEIEKKVF 437

Query: 239 LDIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
           LDIACFF+GEDK +V  +L+         + +L+ KSL++I+ + + MHD+LQEMGR IV
Sbjct: 438 LDIACFFKGEDKHYVVKVLESCGFYAEIGIRVLLSKSLITITNDRIWMHDLLQEMGRDIV 497

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           R+   +EPG+RSRLW  K++S VL ++ GT+ +EGI LD  + +  +L  +AF  M  LR
Sbjct: 498 RRSCYEEPGRRSRLWLYKDVSHVLSNDTGTEQVEGIVLDSCEQEDKHLSAKAFMKMRKLR 557

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
           L K                         V+L   L+YL  KLRYL W+ YP R+LPS F+
Sbjct: 558 LLKL----------------------RNVRLSGSLEYLSNKLRYLEWEEYPFRSLPSTFQ 595

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY----LSALSFK-GCQSLRSFPSNLHF 470
           P  LVEL+L  S ++Q W+G K      + +  Y    +  + F+ G   ++        
Sbjct: 596 PDKLVELHLPSSNIQQLWKGMKPLKMLKVIDLSYSVNLIKTMDFRDGLWDMK-------- 647

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                     C+  ++   I+GK  +L   ++    +PS +     L ++D      L  
Sbjct: 648 ----------CLEKLDIGGIAGK--QLASTKAWDFLLPSWLLPRKTLNLMDF-----LPS 690

Query: 531 ISTSFCKLRSLVTLILLGCLNLEH--FPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
           IS   C LRSL     L   NL     P  L     L+ +         +P+S   L  L
Sbjct: 691 ISV-LCTLRSLN----LSYCNLAEGTLPNDLSCFPSLQSLNLSGNDFVSVPTSISKLSKL 745

Query: 589 EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
           E L    C KL +LP+    + YL      +S  + LP  +     L +L  ++C+ L+S
Sbjct: 746 EDLRFAHCKKLQSLPNLPSGILYL-STDGCSSLGTSLPKIITKHCQLENLCFANCERLQS 804

Query: 649 FP--RTFLLGLSAMGLLHISDYA---VREIPQEIA--YLSSLEILYLSGNNFES------ 695
            P   + ++ +S  GL    +++    ++ P+  A  +L+ ++++ + G N  +      
Sbjct: 805 LPDLSSSIVNISMEGLTAQENFSNPLEKDDPKASALTFLNRMQLVEIQGKNCSAFARLTS 864

Query: 696 -LPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLT 754
            L  +++  SQ  F      +M     E+P    Y  +     LQ LP   F    +   
Sbjct: 865 YLHYLLRHSSQGLFNPSSHVSMCLGGSEIPEWFNYQGIGSSIELQ-LPQHWFTDRWMGFA 923

Query: 755 GCNMLRSLPELPL 767
            C       ELPL
Sbjct: 924 ICVDFEVHDELPL 936



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 199/479 (41%), Gaps = 93/479 (19%)

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR--ISTSFCKLRSLVTLILLGC 549
           G+ +RL+L +  +  V S+      +E + L  C++  +   + +F K+R L  L+ L  
Sbjct: 506 GRRSRLWLYKD-VSHVLSNDTGTEQVEGIVLDSCEQEDKHLSAKAFMKMRKL-RLLKLRN 563

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE-------NLPG------------LEV 590
           + L    E L     L+ +  +  P   LPS+F+       +LP             L++
Sbjct: 564 VRLSGSLEYLSN--KLRYLEWEEYPFRSLPSTFQPDKLVELHLPSSNIQQLWKGMKPLKM 621

Query: 591 LFVEDCS------KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS--LDSSH 642
           L V D S      K  +  D +  ++ L  +     A  QL S+ A   +L S  L    
Sbjct: 622 LKVIDLSYSVNLIKTMDFRDGLWDMKCLEKLDIGGIAGKQLASTKAWDFLLPSWLLPRKT 681

Query: 643 CKGLESFPR-TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIK 701
              ++  P  + L  L ++ L +  + A   +P +++   SL+ L LSGN+F S+P  I 
Sbjct: 682 LNLMDFLPSISVLCTLRSLNLSYC-NLAEGTLPNDLSCFPSLQSLNLSGNDFVSVPTSIS 740

Query: 702 QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRS 761
           ++S+L                                          E L    C  L+S
Sbjct: 741 KLSKL------------------------------------------EDLRFAHCKKLQS 758

Query: 762 LPELPLCLQYLNLEDCNML-RSLPEL--PLC-LQLLTVRNCNRLQSLPEILLCLQELDAS 817
           LP LP  + YL+ + C+ L  SLP++    C L+ L   NC RLQSLP++   +  +   
Sbjct: 759 LPNLPSGILYLSTDGCSSLGTSLPKIITKHCQLENLCFANCERLQSLPDLSSSIVNISME 818

Query: 818 VLEKLSKHSPDLQWAPESLKSAAICF-EFTNCLKLNGKANNKILADSLLRIRHMAIASLR 876
            L      S  L+   +  K++A+ F      +++ GK        +  R+       LR
Sbjct: 819 GLTAQENFSNPLE--KDDPKASALTFLNRMQLVEIQGKN-----CSAFARLTSYLHYLLR 871

Query: 877 LGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCA 935
              +   N   S +    + L GSEIP+WF+ Q  GSSI +QLP H      +GFA C 
Sbjct: 872 HSSQGLFNPS-SHVS---MCLGGSEIPEWFNYQGIGSSIELQLPQHWFTDRWMGFAICV 926


>gi|30681996|ref|NP_192939.2| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|332657684|gb|AEE83084.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1798

 Score =  326 bits (835), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 240/654 (36%), Positives = 331/654 (50%), Gaps = 104/654 (15%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V+ +GIWG  GIGKTT+A+ IF + S ++E    + D+    E  G        +    L
Sbjct: 837  VRSIGIWGTVGIGKTTIAEEIFRKISVQYETCVVLKDLHKEVEVKG-----HDAVRENFL 891

Query: 67   SEKLEVAGPNIPH----------FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            SE LEV     PH          F + R++R ++L++LDDVN+   +   +G L+ FG G
Sbjct: 892  SEVLEVE----PHVIRISDIKTSFLRSRLQRKRILVILDDVNDYRDVDTFLGTLNYFGPG 947

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAF----EHFCNFAFKENHCPEDLNWHS 172
            SRI++T+R++RV    + +   +Y V  L+  ++        C         PE     S
Sbjct: 948  SRIIMTSRNRRVFVLCKIDH--VYEVKPLDIPKSLLLLDRGTCQIVLS----PEVYKTLS 1001

Query: 173  RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
              +V ++ GNP VL+ L S   + R+  W K+  ++     S I+ I  I + S   L  
Sbjct: 1002 LELVKFSNGNPQVLQFLSS---IDRE--WNKLSQEVKTT--SPIY-IPGIFEKSCCGLDD 1053

Query: 233  RVKSIFLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISG-NFLNMHDILQ 288
              + IFLDIACFF   DKD VA +LD    S       L+DKSL++IS  N ++M   +Q
Sbjct: 1054 NERGIFLDIACFFNRIDKDNVAMLLDGCGFSAHVGFRGLVDKSLLTISQHNLVDMLSFIQ 1113

Query: 289  EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
              GR+IVRQES   PG RSRLW+   I  V  ++ GT AIEGIFLD+  +K  + +P  F
Sbjct: 1114 ATGREIVRQESADRPGDRSRLWNADYIRHVFINDTGTSAIEGIFLDMLNLK-FDANPNVF 1172

Query: 349  TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
              M NLRL K Y  K            EE+     V  P GL+YLP KLR LHW+ YPL 
Sbjct: 1173 EKMCNLRLLKLYCSK-----------AEEK---HGVSFPQGLEYLPSKLRLLHWEYYPLS 1218

Query: 409  TLPSNFKPKNLVELNLRCSKVEQPWEGEKA--CVP------------------------S 442
            +LP +F P+NLVELNL  S  ++ W+G+KA  C                          S
Sbjct: 1219 SLPKSFNPENLVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLS 1278

Query: 443  SIQNF---------------------KYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC 481
            S  N                      K L  L+ KGC  L + PS +       +N S C
Sbjct: 1279 SATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNLSGC 1338

Query: 482  VNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSL 541
              L  FP+IS  V  LY+G + I+E+PSSI+ L  LE LDL   + LK + TS  KL+ L
Sbjct: 1339 SKLGNFPEISPNVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHL 1398

Query: 542  VTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL-EVLFVE 594
             TL L GC++LE FP+   +M+ L+ +   RT I ELPSS   L  L E+LFV+
Sbjct: 1399 ETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTALDELLFVD 1452



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 57/241 (23%)

Query: 559  LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LA 617
            LEK++ ++  YSD+  +T++P    +   LE + +E C+ L +L  +I  L+ L ++ L 
Sbjct: 1257 LEKLKKMRLSYSDQ--LTKIPR-LSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLK 1313

Query: 618  AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI 677
              S +  +PS V L + L  L+ S C  L +FP                         EI
Sbjct: 1314 GCSKLENIPSMVDLES-LEVLNLSGCSKLGNFP-------------------------EI 1347

Query: 678  AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM 737
            +   +++ LY+ G   + +P+ IK +  L  + LE+   L++LP     LK+        
Sbjct: 1348 S--PNVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKH-------- 1397

Query: 738  LQSLPVLPFCLESLDLTGCNMLRSLPELPL---CLQYLNLEDCNMLRSLPELPLCLQLLT 794
                      LE+L+L+GC  L   P+      CL++L+L   +    + ELP  +  LT
Sbjct: 1398 ----------LETLNLSGCISLERFPDSSRRMKCLRFLDLSRTD----IKELPSSISYLT 1443

Query: 795  V 795
             
Sbjct: 1444 A 1444


>gi|46577339|sp|Q40392.1|TMVRN_NICGU RecName: Full=TMV resistance protein N
 gi|558887|gb|AAA50763.1| N [Nicotiana glutinosa]
          Length = 1144

 Score =  326 bits (835), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 275/823 (33%), Positives = 383/823 (46%), Gaps = 164/823 (19%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQF------SHEFEGSCFVSDVRGNSETAGGLEHLQ 58
           + V+I+GIWGMGG+GKTT+A+AIFD        S++F+G+CF+ D++ N     G+  LQ
Sbjct: 207 NGVRIMGIWGMGGVGKTTIARAIFDTLLGRMDSSYQFDGACFLKDIKENKR---GMHSLQ 263

Query: 59  KQMLSTTLSEKLEVAGP-NIPHFTKERVRRMKLLIVLDDV-NEVGQLKRLIGELDQFGQG 116
             +LS  L EK       +  H    R+R  K+LIVLDD+ N+   L+ L G+LD FG G
Sbjct: 264 NALLSELLREKANYNNEEDGKHQMASRLRSKKVLIVLDDIDNKDHYLEYLAGDLDWFGNG 323

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++TTRDK ++EK       IY V  L   E+ + F   AF +    E+    S  VV
Sbjct: 324 SRIIITTRDKHLIEK----NDIIYEVTALPDHESIQLFKQHAFGKEVPNENFEKLSLEVV 379

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           +Y KG PL L+V GS L   R + W   +  +     S    I D LKIS++ L P+ + 
Sbjct: 380 NYAKGLPLALKVWGSLLHNLRLTEWKSAIEHMKNNSYS---GIIDKLKISYDGLEPKQQE 436

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGR 292
           +FLDIACF  GE+KD++  IL+         L ILIDKSLV IS  N + MHD++Q+MG+
Sbjct: 437 MFLDIACFLRGEEKDYILQILESCHIGAEYGLRILIDKSLVFISEYNQVQMHDLIQDMGK 496

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
            IV    +K+PG+RSRLW  KE+  V+ +N GT A+E I++  S    +    +A  NM 
Sbjct: 497 YIV--NFQKDPGERSRLWLAKEVEEVMSNNTGTMAMEAIWVS-SYSSTLRFSNQAVKNMK 553

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            LR+F                         +      +DYLP  LR      YP  + PS
Sbjct: 554 RLRVFNM----------------------GRSSTHYAIDYLPNNLRCFVCTNYPWESFPS 591

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
            F+ K LV L LR + +   W   K                               H   
Sbjct: 592 TFELKMLVHLQLRHNSLRHLWTETK-------------------------------HLPS 620

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQ---SAIEEVPSSIECLTDLEVLDLRGCKRLK 529
              I+ S+   L   P  +G     Y+     S +EEV  S+ C + +  L L  CK LK
Sbjct: 621 LRRIDLSWSKRLTRTPDFTGMPNLEYVNLYQCSNLEEVHHSLGCCSKVIGLYLNDCKSLK 680

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKME-----HLK---------RIYSDRTPI 575
           R       + SL  L L  C +LE  PEI  +M+     H++          I+  +T +
Sbjct: 681 RFPC--VNVESLEYLGLRSCDSLEKLPEIYGRMKPEIQIHMQGSGIRELPSSIFQYKTHV 738

Query: 576 TEL-----------PSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQ 624
           T+L           PSS   L  L  L V  CSKL++LP+ IG L+ L    A+ + I +
Sbjct: 739 TKLLLWNMKNLVALPSSICRLKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILR 798

Query: 625 LPSSVALSN-----MLRSL-DSSHCKGLESFPRTFLLGLSAMGLLHIS--DYAVREIPQE 676
            PSS+   N     M R   D  H +    FP     GL ++  L++S  +     +P+E
Sbjct: 799 PPSSIIRLNKLIILMFRGFKDGVHFE----FP-PVAEGLHSLEYLNLSYCNLIDGGLPEE 853

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCK 736
           I  LSSL+ L LS NNFE LP+ I Q+                                 
Sbjct: 854 IGSLSSLKKLDLSRNNFEHLPSSIAQLG-------------------------------- 881

Query: 737 MLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM 779
                      L+SLDL  C  L  LPELP  L  L++ DC+M
Sbjct: 882 ----------ALQSLDLKDCQRLTQLPELPPELNELHV-DCHM 913


>gi|45544513|dbj|BAD12594.1| N protein [Nicotiana tabacum]
          Length = 1128

 Score =  325 bits (834), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 305/983 (31%), Positives = 437/983 (44%), Gaps = 229/983 (23%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQF------SHEFEGSCFVSDVRGNSETAGGLEHLQ 58
            + V+I+GIWGMGG+GKTT+A+AIFD        S++F+G+CF+ D++ N     G+  LQ
Sbjct: 199  NGVRIMGIWGMGGVGKTTIARAIFDTLLGRMDSSYQFDGACFLKDIKENKR---GMHSLQ 255

Query: 59   KQMLSTTLSEKLEVAGP-NIPHFTKERVRRMKLLIVLDDV-NEVGQLKRLIGELDQFGQG 116
              +LS  L EK       +  H    R+R  K+LIVLDD+ N+   L+ L G+LD FG G
Sbjct: 256  NALLSELLREKANYNNEEDGKHQMASRLRSKKVLIVLDDIDNKDHYLEYLAGDLDWFGNG 315

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SRI++TTRDK ++EK       IY V  L   E+ + F   AF +    E+    S  VV
Sbjct: 316  SRIIITTRDKHLIEK----NDIIYEVTALPDHESIQLFKQHAFGKEVPNENFEKLSLEVV 371

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            +Y KG PL L+V GS L   R + W   +  +     S    I D LKIS++ L P+ + 
Sbjct: 372  NYAKGLPLALKVWGSLLHNLRLTEWKSAIEHMKNNSYS---GIIDKLKISYDGLEPKQQE 428

Query: 237  IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGR 292
            +FLDIACF  GE+KD++  IL+         L ILIDKSLV IS  N + MHD++Q+MG+
Sbjct: 429  MFLDIACFLRGEEKDYILQILESCHIGAEYGLRILIDKSLVFISEYNQVQMHDLIQDMGK 488

Query: 293  QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
             IV    +K+PG+RSRLW  KE+  V+ +N GT A+E I++  S    +    +A  NM 
Sbjct: 489  YIV--NFQKDPGERSRLWLAKEVEEVMSNNTGTMAMEAIWVS-SYSSTLRFSNQAVKNMK 545

Query: 353  NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
             LR+F                         +      +DYLP  LR      YP  + PS
Sbjct: 546  RLRVFNM----------------------GRSSTHYAIDYLPNNLRCFVCTNYPWESFPS 583

Query: 413  NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
             F+ K LV L LR + +   W   K                               H   
Sbjct: 584  TFELKMLVHLQLRHNSLRHLWTETK-------------------------------HLPS 612

Query: 473  PVTINFSYCVNLIEFPQISGKVTRLYLGQ---SAIEEVPSSIECLTDLEVLDLRGCKRLK 529
               I+ S+   L   P  +G     Y+     S +EEV  S+ C + +  L L  CK LK
Sbjct: 613  LRRIDLSWSKRLTRTPDFTGMPNLEYVNLYQCSNLEEVHHSLGCCSKVIGLYLNDCKSLK 672

Query: 530  RISTSFCKLRSLVTLILLGCLNLEHFPEILEKME-----HLK---------RIYSDRTPI 575
            R       + SL  L L  C +LE  PEI  +M+     H++          I+  +T +
Sbjct: 673  RFPC--VNVESLEYLGLRSCDSLEKLPEIYGRMKPEIQIHMQGSGIRELPSSIFQYKTHV 730

Query: 576  TEL-----------PSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQ 624
            T+L           PSS   L  L  L V  CSKL++LP+ IG L+ L    A+ + I +
Sbjct: 731  TKLLLWNMKNLVALPSSICRLKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILR 790

Query: 625  LPSSVALSN-----MLRSL-DSSHCKGLESFPRTFLLGLSAMGLLHIS--DYAVREIPQE 676
             PSS+   N     M R   D  H +    FP     GL ++  L++S  +     +P++
Sbjct: 791  PPSSIIRLNKLIILMFRGFKDGVHFE----FP-PVAEGLHSLEYLNLSYCNLIDGGLPED 845

Query: 677  IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCK 736
            I  LSSL+ L LS NNFE LP+ I Q+                                 
Sbjct: 846  IGSLSSLKKLDLSRNNFEHLPSSIAQLG-------------------------------- 873

Query: 737  MLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVR 796
                       L+SLDL  C  L  LPELP  L  L++ DC+M      L     L+T R
Sbjct: 874  ----------ALQSLDLKDCQRLTQLPELPPELNELHV-DCHM-----ALKFIHDLVTKR 917

Query: 797  NCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKAN 856
                                   +KL +                        +KL+  A+
Sbjct: 918  -----------------------KKLHR------------------------VKLD-DAH 929

Query: 857  NKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGS----EIPDWFSNQSSG 912
            N  + +         I+S+R  ++++ ++ L     SL V  G     +IP WF +Q   
Sbjct: 930  NDTMYNLFAYTMFQNISSMR--HDISASDSL-----SLTVFTGQPYPEKIPSWFHHQGWD 982

Query: 913  SSICIQLPPHSSCRN-LIGFAFC 934
            SS+ + LP +    +  +GFA C
Sbjct: 983  SSVSVNLPENWYIPDKFLGFAVC 1005


>gi|359477821|ref|XP_003632029.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1510

 Score =  325 bits (834), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 242/718 (33%), Positives = 354/718 (49%), Gaps = 145/718 (20%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKL-EVAGPNIP 78
           KTT+AKAI+++ SH+++GS F+ +++  S+  G +  LQ+++L   L  K  ++   N  
Sbjct: 230 KTTIAKAIYNEISHQYDGSSFLINIKERSK--GDILQLQQELLHGILRGKFFKINNVNEG 287

Query: 79  HFTKER-VRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
           +   +R +R  ++L++ DDV+E+ QL+ L  E D F   S I++T+RDK VL ++  +  
Sbjct: 288 NSMIKRCLRSNRVLVIFDDVDELKQLEYLAEEKDWFHAKSTIIITSRDKHVLAQYGVDIP 347

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
             Y V+ L  EEA E F  +AFK+N   E     S +++ Y  G PL L+VLG+SL  K+
Sbjct: 348 --YEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYNIIDYADGLPLALKVLGASLFGKK 405

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
            S+W   L  L  I   EIH++   L+ISF+ L    K IFLDIACFF+G+D+DFV+ IL
Sbjct: 406 ISNWESALCKLKIIPHMEIHNV---LRISFDGLDDIEKGIFLDIACFFKGDDRDFVSRIL 462

Query: 258 DDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISR 317
                  +  L D+ L+++S N L+MHD++Q+MG +I+RQE  ++PG+RSRLWD    + 
Sbjct: 463 GPHAEHAITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQECPEDPGRRSRLWDSNA-ND 521

Query: 318 VLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEE 377
           VL  NK T                     +F  M+ LRL   + P+            E+
Sbjct: 522 VLIRNKIT-------------------TESFKEMNRLRLLNIHNPR------------ED 550

Query: 378 QLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK 437
           QL + K  LP   ++   +L YLHWD YPL +LP NF  KNLV+L LR S ++Q W G K
Sbjct: 551 QL-FLKDHLPRDFEFSSYELTYLHWDGYPLESLPMNFHAKNLVQLVLRGSNIKQVWRGNK 609

Query: 438 ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL 497
                                         LH    V I+ SY  +LI  P  S      
Sbjct: 610 ------------------------------LHDKLRV-IDLSYSFHLIGIPDFSS----- 633

Query: 498 YLGQSAIEEVPSSIECLTDLEVL-----DLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
                    VP       +LE+L      + GC  L+ +  +  KL+ L  L   GC  L
Sbjct: 634 ---------VP-------NLEILILIGCTMHGCVNLELLPRNIYKLKHLQILSCNGCSKL 677

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           E FPEI   M  L+ +    T I +LPSS  +L GL+ L +++CSKL  +P +I  L   
Sbjct: 678 ERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHKIPIHICHL--- 734

Query: 613 YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
                               + L  LD  HC  +E                         
Sbjct: 735 --------------------SSLEVLDLGHCNIMEG-----------------------G 751

Query: 673 IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
           IP +I +LSSL+ L L   +F S+P  I Q+S L  ++L   N L+ + ELP CL+ L
Sbjct: 752 IPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCNNLEQITELPSCLRLL 809



 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 3/183 (1%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S + EVP  I    +L+ L LR CK L  + +S    +SL TL   GC  LE  PEIL+ 
Sbjct: 1083 SDMNEVPI-IGNPLELDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQD 1141

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL-YYILAAAS 620
            ME L+++    T I E+PSS + L GL+ L + +C  L NLP++I +L  L + I+ +  
Sbjct: 1142 MESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCP 1201

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
            +  +LP ++     L  L       + +F    L GL ++  L +    +REIP EI YL
Sbjct: 1202 SFKKLPDNLGRLQSLLHLSVGPLDSM-NFQLPSLSGLCSLRQLELQACNIREIPSEICYL 1260

Query: 681  SSL 683
            SSL
Sbjct: 1261 SSL 1263



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 162/389 (41%), Gaps = 77/389 (19%)

Query: 578 LPSSFENLPGLEVLFVE-DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
           LP  FE     E+ ++  D   L++LP N  + + L  ++   S I Q+     L + LR
Sbjct: 558 LPRDFE-FSSYELTYLHWDGYPLESLPMNFHA-KNLVQLVLRGSNIKQVWRGNKLHDKLR 615

Query: 637 SLD---SSHCKGLESFPRT------FLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
            +D   S H  G+  F          L+G +  G +++       +P+ I  L  L+IL 
Sbjct: 616 VIDLSYSFHLIGIPDFSSVPNLEILILIGCTMHGCVNL-----ELLPRNIYKLKHLQILS 670

Query: 688 LSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH------LIDCKMLQS 740
            +G +  E  P I   M +LR + L    ++    +LP  + +L+      L +C  L  
Sbjct: 671 CNGCSKLERFPEIKGNMRKLRVLDLSGTAIM----DLPSSITHLNGLQTLLLQECSKLHK 726

Query: 741 LPVLPFC----LESLDLTGCNMLRSLPELPLC----LQYLNLEDCNMLRSLPELP---LC 789
           +P+   C    LE LDL  CN++       +C    LQ LNLE      S+P        
Sbjct: 727 IPI-HICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLER-GHFSSIPTTINQLSS 784

Query: 790 LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCL 849
           L++L + +CN L+ + E+  CL+ LDA    + S  +P L      L S   CF +    
Sbjct: 785 LEVLNLSHCNNLEQITELPSCLRLLDAHGSNRTSSRAPFL-----PLHSLVNCFRWAQDW 839

Query: 850 KLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSN 908
           K                               +  +     +G+ IVLPGS+ IP+W  N
Sbjct: 840 K-----------------------------HTSFRDSSYHGKGTCIVLPGSDGIPEWILN 870

Query: 909 QSSGSSICIQLPPHSSCRN-LIGFAFCAV 936
           +    S  I+LP +    N  +GFA C V
Sbjct: 871 RGDNFSSVIELPQNWHQNNEFLGFAICCV 899



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 22/149 (14%)

Query: 440  VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
            +PSSI  FK L+ LS  GC  L S P                    E  Q    + +L L
Sbjct: 1111 LPSSIFGFKSLATLSCSGCSQLESIP--------------------EILQDMESLRKLSL 1150

Query: 500  GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
              +AI+E+PSSI+ L  L+ L L  CK L  +  S C L SL  LI+  C + +  P+ L
Sbjct: 1151 SGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNL 1210

Query: 560  EKMEHLKRIYSDRTPITELPSSFENLPGL 588
             +++ L  ++    P+  +     +L GL
Sbjct: 1211 GRLQSL--LHLSVGPLDSMNFQLPSLSGL 1237



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 137/352 (38%), Gaps = 54/352 (15%)

Query: 724  PLCLKYLHLIDCKMLQSLPVLPF---CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNML 780
            PL L  L L DCK L SLP   F    L +L  +GC+ L S+PE+        L+D   L
Sbjct: 1094 PLELDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEI--------LQDMESL 1145

Query: 781  RSLP-------ELPLC------LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSP 827
            R L        E+P        LQ L + NC  L +LPE +  L  L   ++E      P
Sbjct: 1146 RKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVES----CP 1201

Query: 828  DLQWAPESLKSAAICFEFT---------NCLKLNGKANNKILADSLLRIRHMA-----IA 873
              +  P++L         +             L+G  + + L      IR +      ++
Sbjct: 1202 SFKKLPDNLGRLQSLLHLSVGPLDSMNFQLPSLSGLCSLRQLELQACNIREIPSEICYLS 1261

Query: 874  SLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLP-PHSSCRNLIGFA 932
            SL   +  ++    +E  G         IP+W S+Q SG  I ++LP       + +GF 
Sbjct: 1262 SLGREFRRSVRTFFAESNG---------IPEWISHQKSGFKITMKLPWSWYENDDFLGFV 1312

Query: 933  FCAVLDSKKVDSDCFRYFYVSFQFD-LEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGF 991
             C++    ++++   R F     F       L +   ++      Y ED  +   ++   
Sbjct: 1313 LCSLYVPLEIETKTHRIFSCILNFGDDSDSFLFDDLRLEQICECCYYEDASNQGLLVYYS 1372

Query: 992  KPCLNVGFPDGYHHTI-ATFKFFAERKFYKIKRCGLCPVYANPSETKDNTFT 1042
            K  +   F      T+ A+F  +   K  K  RCG   +YA+  E  + T  
Sbjct: 1373 KSDIPEKFHSNEWRTLNASFNVYFGIKPVKAARCGFHFLYAHDYEQNNLTMV 1424



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 9/174 (5%)

Query: 597  SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
            S ++ +P     LE     L     ++ LPSS+     L +L  S C  LES P   L  
Sbjct: 1083 SDMNEVPIIGNPLELDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPE-ILQD 1141

Query: 657  LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFN 715
            + ++  L +S  A++EIP  I  L  L+ L LS   N  +LP  I  ++ L+F+ +E   
Sbjct: 1142 MESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCP 1201

Query: 716  MLQSLPE-LPLCLKYLHL----IDCKMLQSLPVLPFC-LESLDLTGCNMLRSLP 763
              + LP+ L      LHL    +D    Q   +   C L  L+L  CN +R +P
Sbjct: 1202 SFKKLPDNLGRLQSLLHLSVGPLDSMNFQLPSLSGLCSLRQLELQACN-IREIP 1254



 Score = 44.3 bits (103), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 14/153 (9%)

Query: 643  CKGLESFPRTFLLGLSAMGLLHISDYAVRE-IPQEIAYLSSLEILYLSGNNFESLPAIIK 701
            CK L S P + + G  ++  L  S  +  E IP+ +  + SL  L LSG   + +P+ I+
Sbjct: 1105 CKNLTSLPSS-IFGFKSLATLSCSGCSQLESIPEILQDMESLRKLSLSGTAIKEIPSSIQ 1163

Query: 702  QMSQLRFIHLEDFNMLQSLPELPLC----LKYLHLIDCKMLQSLPVLPFCLESLDLTGCN 757
            ++  L+++ L +   L +LPE  +C    LK+L +  C   + LP     L+SL      
Sbjct: 1164 RLRGLQYLLLSNCKNLVNLPE-SICNLTSLKFLIVESCPSFKKLPDNLGRLQSLLHLSVG 1222

Query: 758  MLRS----LPELP-LC-LQYLNLEDCNMLRSLP 784
             L S    LP L  LC L+ L L+ CN +R +P
Sbjct: 1223 PLDSMNFQLPSLSGLCSLRQLELQACN-IREIP 1254


>gi|357516577|ref|XP_003628577.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355522599|gb|AET03053.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1406

 Score =  325 bits (833), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 302/936 (32%), Positives = 441/936 (47%), Gaps = 139/936 (14%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM-- 61
            S+ V+++G++GMGG+GKTTLAKA+F+ F   FE  CF+S+VR  +    GL  +Q  +  
Sbjct: 209  SNNVKVLGLYGMGGVGKTTLAKALFNSFVGRFERRCFISNVRQFASKDDGLVSIQNNIIK 268

Query: 62   -LSTTLSEKLEVAGPNIPHFTKER-VRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
             LS+    +  ++   +   T +R VR  ++L+VLDDV+ V QL  LIG+ + F +GS I
Sbjct: 269  DLSSQEGTRSFISDVKVGISTIKRIVRENRVLLVLDDVDHVNQLDALIGKREWFHEGSCI 328

Query: 120  VVTTRDKRVL-EKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            ++TTRD  VL EK   E   +Y V  L  EEA E F   A ++   P D    S+ +VS 
Sbjct: 329  IITTRDTTVLPEKHVNE---LYEVTELYAEEALELFSYHALRKKDPPPDFLSFSKQIVSL 385

Query: 179  TKGNPLVLEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
            T   PL LEV G  L  KR+   W  V+  L  I    +HD+   LKIS++ L  + K I
Sbjct: 386  TGRMPLALEVFGCFLFGKRRVDEWEDVVKKLKTIRPGNLHDV---LKISYDGLDEQEKCI 442

Query: 238  FLDIACFF--EGEDKDFVASILDD---SESDVLDILIDKSLVSI-SGNFLNMHDILQEMG 291
            FLDIACFF   G  +D V  +L            +L++K L+ +   N L MHD +++MG
Sbjct: 443  FLDIACFFVQMGMKRDDVIDVLRGCGFRGEIATTVLVEKCLIKVREDNTLWMHDQIRDMG 502

Query: 292  RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
            RQIV  E+  +PG RSRLWD  EI  VLK  KGT  I+GI LD             F   
Sbjct: 503  RQIVLDENHVDPGMRSRLWDRAEIMSVLKSKKGTRCIQGIVLD-------------FKER 549

Query: 352  SNLRLFKFYVPK----FYEIEKLPSMSTEEQLSYSKVQLPN-GLD--YLPKKLRYLHWDT 404
            SN +  K Y P+     Y    L + S E  +S   +Q+ N  L+  +LP +L++L W  
Sbjct: 550  SN-QWSKNYPPQPQAEKYNQVMLDTKSFEPMVSLRLLQINNLSLEGKFLPDELKWLQWRG 608

Query: 405  YPLRTLPSNFKPKNLVELNL-RCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRS 463
             PL  +  +  P+ L  L+L    K++  W  +   VP +      L  ++   C  L +
Sbjct: 609  CPLECISLDTLPRELAVLDLSNGQKIKSLWGLKSQKVPEN------LMVMNLSNCYQLAA 662

Query: 464  FPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLR 523
             P     +    IN + C+NL          TR++           SI  LT L  L+L 
Sbjct: 663  IPDLSWCLGLEKINLANCINL----------TRIH----------ESIGSLTTLRNLNLT 702

Query: 524  GCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE 583
             C+ L  + +    L+ L +LIL  C  L+  PE +  ++ LK + +D+T I +LP S  
Sbjct: 703  RCENLIELPSDVSGLKHLESLILSECSKLKALPENIGMLKSLKTLAADKTAIVKLPESIF 762

Query: 584  NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
             L  LE L ++ CS L  LPD IG L  L  +    + + +LP++V     L  L    C
Sbjct: 763  RLTKLERLVLDRCSHLRRLPDCIGKLCALQELSLYETGLQELPNTVGFLKNLEKLSLMGC 822

Query: 644  KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY---------------- 687
            +GL   P + +  L ++  L  S+  ++E+P  I  LS L  L                 
Sbjct: 823  EGLTLMPDS-IGNLESLTELLASNSGIKELPSTIGSLSYLRTLLVRKCKLSKLPDSFKTL 881

Query: 688  -------LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE---LPLCLKYLHLIDCKM 737
                   L G     LP  I ++ QLR + + + + L+SLPE       L  L++I+   
Sbjct: 882  ASIIELDLDGTYIRYLPDQIGELKQLRKLEIGNCSNLESLPESIGYLTSLNTLNIINGN- 940

Query: 738  LQSLPVLPFCLE---SLDLTGCNMLRSLPE-----LPLCLQYLNLEDCNMLRSLPE-LPL 788
            ++ LPV    LE   +L L+ C ML+ LP        LC  +L +E+  M+  LPE   +
Sbjct: 941  IRELPVSIGLLENLVNLTLSRCRMLKQLPASIGNLKSLC--HLKMEETAMV-DLPESFGM 997

Query: 789  CLQLLTVRNCNRLQSLPEI---------------LLCLQELDA----------------S 817
               L T+R   R   +P                 L  L ELDA                S
Sbjct: 998  LSSLRTLRMAKRPHLVPISVKNTGSFVLPPSFCNLTLLHELDARAWRLSGKIPDDFEKLS 1057

Query: 818  VLEKLSKHSPDLQWAPESLKSAAICFEFT--NCLKL 851
            +LE L     +    P SLK  +I  E +  NC +L
Sbjct: 1058 LLETLKLDQNNFHSLPSSLKGLSILKELSLPNCTEL 1093


>gi|227438221|gb|ACP30600.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 909

 Score =  325 bits (833), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 225/657 (34%), Positives = 330/657 (50%), Gaps = 98/657 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-----LQ 58
           S+ V++VGIWG  GIGKTT+A+A+F Q S  F+ S FV + +G+    G  E+     LQ
Sbjct: 200 SNEVKMVGIWGPAGIGKTTVARALFKQLSVSFQHSIFVENFKGSYRRTGLDEYGFKLRLQ 259

Query: 59  KQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +Q LS  +  K +++    +    KER++ +K+L+VLDDV+ + QL  L+ +   FG GS
Sbjct: 260 EQFLSEVIDHKHMKIHDLGL---VKERLQDLKVLVVLDDVDRLEQLDALVKQSQWFGPGS 316

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+VTT +K++L       K IY++      E+ E FC  AF ++  P+     +  +  
Sbjct: 317 RIIVTTENKQLLRAH--GIKLIYQMGFPSKSESLEIFCQSAFGKSSAPDGYIELATEITK 374

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                PL L+VLGSSL   R  +  +    L R+  S   DI ++L++ ++ L  + KSI
Sbjct: 375 LAGYLPLALKVLGSSL---RGMNKDEQKAALPRLRTSLSEDIRNVLRVGYDGLHDKDKSI 431

Query: 238 FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI--SGNFLNMHDILQEMGR 292
           FL +AC F GE+ ++V  +L  S  DV   L +L ++SL+ I      + MH +LQ +GR
Sbjct: 432 FLYVACLFSGENVEYVKLLLASSGLDVNFGLQVLTNRSLIYILRCNRTIMMHSLLQHLGR 491

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           ++V  +S  EPGKR  L D  EI  VL  N GT A+ GI LD+S I    L+ R+F  M 
Sbjct: 492 EVVCAQSIDEPGKRQFLVDASEIYDVLVDNTGTAALLGISLDISTINEWFLNERSFGGMH 551

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NL   KFY     +             + +++ LP GLDYLP+KLR LHWDTYP  +LP 
Sbjct: 552 NLMFLKFYKSSLGK-------------NQTELHLPRGLDYLPRKLRLLHWDTYPTTSLPL 598

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEK----------------------------------- 437
           +F+P+ LV LNLR SK+E+ WEGE+                                   
Sbjct: 599 SFRPEFLVVLNLRESKLEKLWEGEQPLRSLTHMDLSMSENLKEIPDLSKAVNMEELCLSH 658

Query: 438 ----ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
                 +P S++N   L  L  + C  L S P N++      +N   C  L  FP +S  
Sbjct: 659 CSSLVMLPPSVKNLNKLVVLEMECCSKLESIPKNINLESLSILNLDKCSRLTTFPDVSSN 718

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           +  L + ++AIE+VP +I    +L  LD+ GC                         NL+
Sbjct: 719 IGYLSISETAIEQVPETIMSWPNLAALDMSGCT------------------------NLK 754

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
            FP +   +E L      RT I E+PS  +NL  L  L +  C KL ++   I  LE
Sbjct: 755 TFPCLPNTIEWLD---FSRTEIEEVPSRVQNLYRLSKLLMNSCMKLRSISSGISRLE 808



 Score = 40.8 bits (94), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 35/227 (15%)

Query: 554 HFPEILEKM-EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           H P  L+ +   L+ ++ D  P T LP SF   P   V+     SKL+ L +    L  L
Sbjct: 571 HLPRGLDYLPRKLRLLHWDTYPTTSLPLSFR--PEFLVVLNLRESKLEKLWEGEQPLRSL 628

Query: 613 YYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR 671
            ++ L+ +  + ++P      NM   L  SHC  L                         
Sbjct: 629 THMDLSMSENLKEIPDLSKAVNM-EELCLSHCSSLVM----------------------- 664

Query: 672 EIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
            +P  +  L+ L +L +   +  ES+P  I  +  L  ++L+  + L + P++   + YL
Sbjct: 665 -LPPSVKNLNKLVVLEMECCSKLESIPKNI-NLESLSILNLDKCSRLTTFPDVSSNIGYL 722

Query: 731 HLIDCKMLQ---SLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNL 774
            + +  + Q   ++   P  L +LD++GC  L++ P LP  +++L+ 
Sbjct: 723 SISETAIEQVPETIMSWP-NLAALDMSGCTNLKTFPCLPNTIEWLDF 768


>gi|356495057|ref|XP_003516397.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1067

 Score =  325 bits (833), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 235/665 (35%), Positives = 350/665 (52%), Gaps = 117/665 (17%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+ +F +   E++   F+ +    S   G +  L++++ S  L E +++   NI H
Sbjct: 226 KTTIAEEMFKKLYSEYDSYYFLENEEEESRKHGTIS-LKEKLFSALLGENVKM---NILH 281

Query: 80  ----FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGE 135
               + K ++  MK+LIVLDDVN+   L++LIG LD FG+GSRI++TTRDK+VL   + +
Sbjct: 282 GLSNYVKRKIGFMKVLIVLDDVNDSDLLEKLIGNLDWFGRGSRIIITTRDKQVLIANKVD 341

Query: 136 EKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
           +  IY V  L   EA E F  +AF +NH   +    S+ VV+Y++G PLVL+VLG  LC 
Sbjct: 342 D--IYHVGALNSSEALELFSFYAFNQNHLDMEYYKLSKRVVNYSQGIPLVLKVLGHLLCG 399

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGED--KDFV 253
           K K  W   L  L  +  +   DIY+ +++S++ L  + + I LD+ACFF G +   D +
Sbjct: 400 KDKEVWESQLDKLKNMPNT---DIYNAMRLSYDDLDRKEQKILLDLACFFMGLNLKVDHI 456

Query: 254 ASILDDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRS 307
             +L DSE D      L+ L DK+L++IS  N ++MHDI+QEM  +IVRQES ++PG RS
Sbjct: 457 KVLLKDSEKDDSVVVGLERLKDKALITISEDNIISMHDIIQEMAWEIVRQESIEDPGNRS 516

Query: 308 RLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEI 367
           RL DP +I  VLK+NKGT+AI  I  D+S I+ + L P  FT MS L+   F        
Sbjct: 517 RLMDPNDIYEVLKYNKGTEAIRSIRADMSVIRKLQLSPHIFTKMSKLQFLYF-------- 568

Query: 368 EKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCS 427
              PS   ++ LS     LP+GL   P +LRY+ W  YPL++LP NF  KN+V  +L CS
Sbjct: 569 ---PSKYNQDGLSL----LPHGLQSFPVELRYVAWMHYPLKSLPKNFSAKNIVMFDLSCS 621

Query: 428 KVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEF 487
           +VE+ W+G        +QN   L  L   G +                       NL E 
Sbjct: 622 QVEKLWDG--------VQNLMNLKELKVSGSE-----------------------NLKEL 650

Query: 488 PQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKR----------LKRISTSFCK 537
           P +S                       T+LEVLD+  C R          LKR+S ++C 
Sbjct: 651 PDLSKA---------------------TNLEVLDINICPRLTSVSPSILSLKRLSIAYCS 689

Query: 538 LRSLVT---LILLGCLNLEHFPEILE---KMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
           L  + +   L  L  LNLE   ++ E     E++  +    T +  LPSSF     L++L
Sbjct: 690 LTKITSKNHLPSLSFLNLESCKKLREFSVTSENMIELDLSSTRVNSLPSSFGRQSKLKIL 749

Query: 592 FVEDCSKLDNLPDNIGSLEYLYYILAAAS----AISQLPSSVALSNMLRSLDSSHCKGLE 647
            + D S +++LP +  +L  L Y+    S     +++LP S      L++LD++ C  L+
Sbjct: 750 RLRD-SGINSLPSSFKNLTRLQYLTVYKSRELCTLTELPLS------LKTLDATDCTSLK 802

Query: 648 S--FP 650
           +  FP
Sbjct: 803 TVLFP 807



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 143/332 (43%), Gaps = 45/332 (13%)

Query: 424 LRCSKVEQPWEGEKACVPSSI-QNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
           +R   +E P    +   P+ I +  KY      KG +++RS  +++  +  + ++     
Sbjct: 504 VRQESIEDPGNRSRLMDPNDIYEVLKY-----NKGTEAIRSIRADMSVIRKLQLS----- 553

Query: 483 NLIEFPQISGKVTRLYL-------GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF 535
                P I  K+++L          Q  +  +P  ++       ++LR    +     S 
Sbjct: 554 -----PHIFTKMSKLQFLYFPSKYNQDGLSLLPHGLQSFP----VELRYVAWMHYPLKSL 604

Query: 536 CKLRSLVTLIL--LGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLF 592
            K  S   +++  L C  +E   + ++ + +LK +  S    + ELP        LEVL 
Sbjct: 605 PKNFSAKNIVMFDLSCSQVEKLWDGVQNLMNLKELKVSGSENLKELPD-LSKATNLEVLD 663

Query: 593 VEDCSKLDNLPDNIGSLEYL---YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
           +  C +L ++  +I SL+ L   Y  L   ++ + LPS       L  L+   CK L   
Sbjct: 664 INICPRLTSVSPSILSLKRLSIAYCSLTKITSKNHLPS-------LSFLNLESCKKL--- 713

Query: 650 PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
            R F +    M  L +S   V  +P      S L+IL L  +   SLP+  K +++L+++
Sbjct: 714 -REFSVTSENMIELDLSSTRVNSLPSSFGRQSKLKILRLRDSGINSLPSSFKNLTRLQYL 772

Query: 710 HLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
            +     L +L ELPL LK L   DC  L+++
Sbjct: 773 TVYKSRELCTLTELPLSLKTLDATDCTSLKTV 804



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 146/368 (39%), Gaps = 69/368 (18%)

Query: 645 GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
           GL+SFP    + L  +  +H   Y ++ +P+  +   ++ +  LS +  E L   ++ + 
Sbjct: 583 GLQSFP----VELRYVAWMH---YPLKSLPKNFS-AKNIVMFDLSCSQVEKLWDGVQNLM 634

Query: 705 QLRFIHLEDFNMLQSLPELPLC--LKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLR-- 760
            L+ + +     L+ LP+L     L+ L +  C  L S+      L+ L +  C++ +  
Sbjct: 635 NLKELKVSGSENLKELPDLSKATNLEVLDINICPRLTSVSPSILSLKRLSIAYCSLTKIT 694

Query: 761 SLPELPLCLQYLNLEDCNMLR--------------------SLPE--------------- 785
           S   LP  L +LNLE C  LR                    SLP                
Sbjct: 695 SKNHLP-SLSFLNLESCKKLREFSVTSENMIELDLSSTRVNSLPSSFGRQSKLKILRLRD 753

Query: 786 -----LPLC------LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPE 834
                LP        LQ LTV     L +L E+ L L+ LDA+    L   +       +
Sbjct: 754 SGINSLPSSFKNLTRLQYLTVYKSRELCTLTELPLSLKTLDATDCTSLK--TVLFPSIAQ 811

Query: 835 SLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAIN-EKLSELRGS 893
             K       F NCLKL+  +   I  ++ + +   A   L    E   + ++  E    
Sbjct: 812 QFKENRKEVLFWNCLKLDEHSLKAIGLNAHINVMRFAYQHLSAPDENYDDYDRTYESYQV 871

Query: 894 LIVLPGSEIPDWFSNQSSGSSICIQL--PPHSSCRNLIGFAFCAVLDSKKVDSDC-FRY- 949
             V PG  +P+W   +++   I I L   PHSS    +GF F  V+    V +   +R+ 
Sbjct: 872 KYVYPGGIVPEWMEYKTTKDYIIIDLSSSPHSSQ---LGFIFSFVISGPMVKAIMGYRFT 928

Query: 950 FYVSFQFD 957
           FY++   D
Sbjct: 929 FYITVSDD 936


>gi|357486941|ref|XP_003613758.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515093|gb|AES96716.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1095

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 258/763 (33%), Positives = 381/763 (49%), Gaps = 103/763 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S++ V++VGI+GMGG+GKTTLA A+++  + +F+  CF+ D+R NS+  G +E LQ  
Sbjct: 213 VESNEGVRMVGIYGMGGLGKTTLACAVYNCIADQFDSLCFLGDIRENSKKRGLVE-LQDM 271

Query: 61  MLSTTLSEK-LEVAGPN--IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +L     EK +++   N  IP   + R+R  K+L++LDD++ + QLK L G L+ FG GS
Sbjct: 272 LLFELTGEKDIKLCSLNKAIP-IIESRLRGRKILLILDDIDSLEQLKALAGGLEWFGSGS 330

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           R+++TTRDK +L+ +  E  ++Y V GL+ EEA E F   AFK           ++ V+ 
Sbjct: 331 RVIITTRDKHLLQVYGVE--RVYEVEGLKHEEALELFVWNAFKSKEVEPSYFDIAKKVLL 388

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y+KG PL +E++GS L  K    W   +    RI    I DI   L++S++ L    K I
Sbjct: 389 YSKGLPLAIEIIGSDLYGKTILEWQSAIDTYERIPHENIQDI---LRVSYDGLKEFEKEI 445

Query: 238 FLDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNFLNMHDILQEMGRQ 293
           FLDI CFF+G     V +IL        D    +LIDKSL+ ++   + +HD++++MGR+
Sbjct: 446 FLDITCFFKGYKLSDVMNILHSGRGYAPDYAVQVLIDKSLIKMNEYRVRIHDMIEDMGRE 505

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IVR ES  +PG RSRLW  K+I  VLK NKG+D  E I L+L K K +  D  A  NM N
Sbjct: 506 IVRLESPSKPGGRSRLWFTKDILHVLKENKGSDKTEIIVLNLLKDKEVQWDGNALKNMEN 565

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           L++                      L   K +   G ++LPK LR L W  YP  +LP++
Sbjct: 566 LKI----------------------LVIEKTRFSRGPNHLPKSLRVLKWFDYPESSLPAH 603

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           + PK LV L+L  S       G        I  FK L  +    CQSL+  P        
Sbjct: 604 YNPKKLVILDLSDST------GLFTFGNQMIMKFKSLKEMKISKCQSLKKVP-------- 649

Query: 474 VTINFSYCVNLIEFPQISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
              + S   NL           +L+L    ++ EV  SI  L  LE L+L  C  L  + 
Sbjct: 650 ---DMSGAPNL----------KKLHLDSCKSLVEVHDSIGFLEKLEDLNLNYCTSLTILP 696

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
                L SL T+ L  C  +++FPEIL KME++K +    + I+ELP S   L GL  L 
Sbjct: 697 YGI-NLPSLKTMSLRNCTTVKNFPEILGKMENIKYLVLSNSEISELPYSIGLLVGLVNLT 755

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILA------------AASAISQLPSSVALSN---MLRS 637
           ++ C+KL  LP +I  L  L  + A                   LPS V  ++   + R 
Sbjct: 756 IDRCNKLLELPSSIFMLPKLETLEAYCCRGLARIKKRKGQVPETLPSDVRNASSCLVHRD 815

Query: 638 LDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLP 697
           +D S C      P  FL  L  +  LH              Y++++ + Y S      LP
Sbjct: 816 VDLSFC----YLPYEFLATL--LPFLH--------------YVTNISLDYSS---ITILP 852

Query: 698 AIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           + I     L  + + +   L+ +  LP  +K+L  I+C+ L S
Sbjct: 853 SSINACYSLMKLTMNNCTELREIRGLPPNIKHLGAINCESLTS 895


>gi|357514703|ref|XP_003627640.1| NBS-LRR resistance-like protein 4T [Medicago truncatula]
 gi|355521662|gb|AET02116.1| NBS-LRR resistance-like protein 4T [Medicago truncatula]
          Length = 1151

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 262/739 (35%), Positives = 369/739 (49%), Gaps = 87/739 (11%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPN-IP 78
           KTTLA AIF + S  +EGSCF+ +V   S+  G L +   ++LS  L E L +  P  I 
Sbjct: 222 KTTLAAAIFQKVSSMYEGSCFLENVTEESKRHG-LSYTYNRLLSKLLGEDLHIETPKVIS 280

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGE-LDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
               +R++RMK  IVLDDV  +  L  LIG   D  G GSR++VTTRDK VL    G   
Sbjct: 281 SMVMKRLKRMKAFIVLDDVRTLELLDNLIGAGHDCLGVGSRVIVTTRDKHVLTG--GGID 338

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           +I++V  +  + +   F   AFK+    E     S +VVSYTKGNPL L+VLGS L  K 
Sbjct: 339 EIHQVKEMNSQNSIRLFSLNAFKKILPNEGYEEISNNVVSYTKGNPLALKVLGSFLRTKS 398

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
           K  W   L+ L  I  +EI  +   L++S+++L    K+IFLD+ACFF+G       + +
Sbjct: 399 KKEWNSALNKLKEIPNAEIQKV---LRLSYDELDDTEKNIFLDVACFFKGFGSSSSVTKI 455

Query: 258 DDSESDVLDI----LIDKSLVSI-SGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
            ++     DI    L+DK+LV+I S NF+ MHD++++MGR+IVR+ES K P +RSRLW+ 
Sbjct: 456 LNACGFFADIGIRNLLDKALVTITSENFIKMHDLIKQMGREIVREESIKNPRQRSRLWNA 515

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
            EI  VL  N GT A+E I LD+ +   INL+  AFT M NL++  F            +
Sbjct: 516 DEICDVLTDNNGTTAVESICLDMDQTTCINLNSNAFTKMPNLKMLAF------------N 563

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
              ++ + ++ V L  G+D+ P  LR   W  YPL +LPSNF P NLVEL L  S +E+ 
Sbjct: 564 DHHQDVMGFNSVHLLEGVDFFPNNLRSFGWSAYPLNSLPSNFSPSNLVELYLPYSNLEKL 623

Query: 433 WEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
           W G         QNF  L  +       L          CP   NFS   NL        
Sbjct: 624 WNGA--------QNFPSLERIDLSKSARL--------LECP---NFSNAPNL-------- 656

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
           K  +L   +S I  V  SI  L  LE L++ GCK LK + +S  + +S   L    C NL
Sbjct: 657 KHIKLENCES-ICHVDPSIFNLPKLEDLNVSGCKSLKSLYSS-TRSQSFQRLYAGECYNL 714

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           + F  + +            T  T L SS   +  L+V     C  L +LP+N     + 
Sbjct: 715 QEFISMPQNTN------DPSTTTTGLTSSTLLIRNLDVFTFPICESLVDLPEN-----FS 763

Query: 613 YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
           Y I  + S ++   +   L  +L S    + +GL                 H     + E
Sbjct: 764 YDITLSDSKMNDKDTLTTLHKLLPSPCFRYVRGL------------CFSYCH----NLSE 807

Query: 673 IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
           IP  I+ LSSLE L L      SLP  I  + +L F  + +  MLQS+P LP  ++   +
Sbjct: 808 IPDSISLLSSLENLGLFACPIISLPESINCLPRLMFFEVANCEMLQSIPSLPQSIQSFRV 867

Query: 733 IDCKMLQSL------PVLP 745
            +C+ LQ++      P+LP
Sbjct: 868 WNCESLQNVIELGTKPLLP 886



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 133/339 (39%), Gaps = 91/339 (26%)

Query: 725  LCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCL---QYLNLEDCNMLR 781
            LC  Y H +  ++  S+ +L   LE+L L  C ++ SLPE   CL    +  + +C ML+
Sbjct: 797  LCFSYCHNLS-EIPDSISLLS-SLENLGLFACPII-SLPESINCLPRLMFFEVANCEMLQ 853

Query: 782  SLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAI 841
            S+P LP  +Q   V NC  LQ++ E L     L A VLE   + + D             
Sbjct: 854  SIPSLPQSIQSFRVWNCESLQNVIE-LGTKPLLPADVLENKEEAASD------------- 899

Query: 842  CFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSL-IVLPGS 900
                          NN                    GY  + N   + ++G +  +LP  
Sbjct: 900  --------------NND-----------------DDGYNYSYNWD-TLIKGKICYMLPAG 927

Query: 901  EIP--DWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKK---------------VD 943
                 DWF   S+ + + I+LPP  +    +GF F  VL   +               ++
Sbjct: 928  NFKNGDWFHYHSTQTLVSIELPPSDN----LGFIFYLVLSQVQSYRIGYHGSFGCECYLE 983

Query: 944  SDC-----FRYFYVSFQFDLEIKTLSE--TKHVDLGYNSRYIEDLIDSDRVILGFKPCLN 996
            + C      R F+V     L   T     + H+ L Y+++  + ++++ + I        
Sbjct: 984  TTCGECISIRSFFVDESVLLNPHTPLHIFSDHLFLWYDAQCCKQIMEAVKEI-------K 1036

Query: 997  VGFPDGYHHTIATFKFFAERK---FYKIKRCGLCPVYAN 1032
                   H++  TFKFFA  +      IK CG   +Y++
Sbjct: 1037 ANDMSAIHNSKLTFKFFARTQDNMEAAIKECGFRWIYSS 1075


>gi|357507537|ref|XP_003624057.1| TMV resistance protein N [Medicago truncatula]
 gi|355499072|gb|AES80275.1| TMV resistance protein N [Medicago truncatula]
          Length = 1122

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 259/777 (33%), Positives = 381/777 (49%), Gaps = 116/777 (14%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS-TTLSEKLEVAGPNIP 78
           K+T+A+A+++    EF+ +CF+ +VR  SET  GL HLQ+Q+LS  ++S        +  
Sbjct: 235 KSTIARAVYEAIRCEFQLTCFLENVREISET-NGLVHLQRQLLSHMSISRNDFHNLYDGK 293

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              +   RR K+L+VLDDVNE+ QL+ + G+ D FG GSR+++TTRDK +L        K
Sbjct: 294 KTIQNSFRRKKVLLVLDDVNELNQLENMAGKQDWFGPGSRVIITTRDKHLL--MTHGVHK 351

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            Y V  L   EA   FC  AFK +   E     S+ VV YT G PL LEV GS L  +  
Sbjct: 352 TYEVWMLFQNEALNLFCLKAFKGDKPQEGYLDLSKEVVDYTGGLPLALEVFGSYLYGRNV 411

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             W   +  +  +    +  I D L+IS+  L P  K +FLDIACFF+G   D V  IL+
Sbjct: 412 DLWHSAIKKIRSV---PLRKIQDKLEISYESLDPMEKDVFLDIACFFKGMKIDKVIDILE 468

Query: 259 DS---ESDVLDILIDKSLVSIS--GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           +       ++ +LID+SL+++    N L MHD+LQEMGR IV QES  +PG+ SRLW  +
Sbjct: 469 NCGYFPKIIIQVLIDRSLITLDRVNNKLGMHDLLQEMGRNIVFQESPNDPGRCSRLWSKE 528

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           +I  VL  NKGT+ I  + L+L +         AF+  S L+L                 
Sbjct: 529 DIDSVLTKNKGTEKISSVVLNLLQPYEARWSTEAFSKTSQLKL----------------- 571

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
                L+ ++VQLP GL  LP  L+ L W   PL+TL    +   +V++ L  SK+E+ W
Sbjct: 572 -----LNLNEVQLPLGLSCLPCSLKVLRWRGCPLKTLAQTNQLDEVVDIKLSHSKIEKLW 626

Query: 434 EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG- 492
            G        ++  KYL                          N  +  NL   P  SG 
Sbjct: 627 HGVYF-----MEKLKYL--------------------------NLKFSKNLKRLPDFSGV 655

Query: 493 -KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
             + +L L G S + EV  S+     + V+ L+ CK LK +     ++ SL  LIL GC 
Sbjct: 656 PNLEKLILKGCSILTEVHLSLVHHKKVVVVSLKNCKSLKSLPGKL-EMSSLKKLILSGCS 714

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED--------------- 595
             +  PE  EKME+L  +    T I +LP S  +L GL  L ++D               
Sbjct: 715 EFKFLPEFGEKMENLSILALKGTDIRKLPLSLGSLVGLTNLNLKDCKSLVCLPDTIHGLN 774

Query: 596 ---------CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
                    CS+L  LPD +  ++ L  + A  +AI +LPS +   + L+ L  + C+G 
Sbjct: 775 SLIILNISGCSRLCRLPDGLKEIQCLKELHANDTAIDELPSFIFYLDNLKVLSFAGCQGP 834

Query: 647 ES-----FPRTFLLG----------------LSAMGLLHIS--DYAVREIPQEIAYLSSL 683
            +     FP  ++ G                L ++  L++S  + +   IP    +LSSL
Sbjct: 835 PAMSTNWFPFNWMFGGQSASTGFRLPTSFLSLHSLKYLNLSYCNLSEESIPNYFHHLSSL 894

Query: 684 EILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           + L L+GNNF  +P+ I ++S+LRF+ L     LQ LPELP  +  L   +C  L++
Sbjct: 895 KSLDLTGNNFVIIPSSISKLSRLRFLCLNWCEQLQLLPELPSRIMQLDASNCDSLET 951


>gi|147799277|emb|CAN74723.1| hypothetical protein VITISV_014048 [Vitis vinifera]
          Length = 1448

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 243/731 (33%), Positives = 352/731 (48%), Gaps = 154/731 (21%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE---KLEVAGPN 76
           KTT+AKAI+++ SH+++G+ F+ +++  S+  G +  LQ+++L   L     K+      
Sbjct: 224 KTTIAKAIYNEISHQYDGNSFLINIKERSK--GDILQLQQELLHGLLRGNFFKINNVDEG 281

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           I    K  +   ++L++ DDV+E+ QL+ L  E D F   S I++T+RDK VL ++  + 
Sbjct: 282 IS-MIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDWFRAKSTIIITSRDKHVLAQYGADI 340

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
           +  Y V+ L  EEA E F  +AFK+N   E     S +++ Y  G PL L+VLG+SL  K
Sbjct: 341 R--YEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYNIIDYANGLPLALKVLGASLFGK 398

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
           + S+W   L  L  +   EIH++   L+ISF+ L    K IFLD+ACFF+G+D+DFV+ I
Sbjct: 399 KISNWESALCKLKIMPHMEIHNV---LRISFDGLDDIDKGIFLDVACFFKGDDRDFVSRI 455

Query: 257 LDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
           L       +  L D+ L+++S N L+MHD++Q+MG +I+RQE  K+ G+RSRLWD     
Sbjct: 456 LGPHAEHAITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQECPKDLGRRSRLWDYNAY- 514

Query: 317 RVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTE 376
            VL  N GT AIEG+FLD  K     L   +F  M+ LRL K + P+     KL      
Sbjct: 515 HVLIRNSGTKAIEGLFLDRCKFNPSQLTTESFKEMNRLRLLKIHNPR----RKL------ 564

Query: 377 EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE 436
               + +  LP   ++   +L YLHWD YPL +LP NF  KNLVEL LR S ++Q W G 
Sbjct: 565 ----FLEDHLPRDFEFSSYELTYLHWDGYPLESLPMNFHAKNLVELLLRNSNIKQLWRGN 620

Query: 437 KACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR 496
           K                              LH    V I+ SY V+LI  P  S     
Sbjct: 621 K------------------------------LHDKLRV-IDLSYSVHLIRIPDFSS---- 645

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
                     VP       +LE+L L                              E FP
Sbjct: 646 ----------VP-------NLEILTLE-----------------------------ERFP 659

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
           EI   M  L+ +    T I +LPSS  +L GL+ L +E+CSKL  +P +I  L       
Sbjct: 660 EIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKIPSHICHL------- 712

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE 676
                           + L+ LD  HC  +E                         IP +
Sbjct: 713 ----------------SSLKVLDLGHCNIMEG-----------------------GIPSD 733

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCK 736
           I +LSSL+ L L   +F S+P  I Q+S+L  ++L   + L+ +PELP  L+ L      
Sbjct: 734 ICHLSSLQKLNLERGHFGSIPTTINQLSRLEILNLSHCSNLEQIPELPSRLRLLDAHGSN 793

Query: 737 MLQS-LPVLPF 746
            + S  P LP 
Sbjct: 794 RISSRAPFLPL 804



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/241 (39%), Positives = 135/241 (56%), Gaps = 3/241 (1%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S + EVP  IE   +L+ L LR CK L  + +S    +SL TL   GC  LE FPEIL+ 
Sbjct: 1028 SDMNEVPI-IENPLELDSLCLRNCKNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQD 1086

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAAS 620
            ME L+++Y D T I E+PSS  +L GL  L +  C  L NLP++I +L  L  + +    
Sbjct: 1087 MESLRKLYLDGTTIKEIPSSISHLRGLHTLSLYQCKNLVNLPESICNLTSLKNLGVRRCP 1146

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
              ++ P ++     L+SL  SH   ++ F    L GL ++ LL +    +REIP  I YL
Sbjct: 1147 NFNKFPDNLGRLRSLKSLFISHLDSMD-FQLPSLSGLCSLKLLMLHACNLREIPSGIYYL 1205

Query: 681  SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
            SSL +LYL  N+F  +P  I Q+  L+ + L    MLQ +PELP  L YL + +C  L++
Sbjct: 1206 SSLVLLYLGRNHFSRIPDGISQLYNLKLLDLSHCKMLQHIPELPSSLMYLDVHNCTSLEN 1265

Query: 741  L 741
            L
Sbjct: 1266 L 1266



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 105/213 (49%), Gaps = 8/213 (3%)

Query: 444  IQNFKYLSALSFKGCQSLRSFPSNLH-FVCPVTINFSYCVNLIEFPQI---SGKVTRLYL 499
            I+N   L +L  + C++L S PS++  F    T++ S C  L  FP+I      + +LYL
Sbjct: 1036 IENPLELDSLCLRNCKNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYL 1095

Query: 500  GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
              + I+E+PSSI  L  L  L L  CK L  +  S C L SL  L +  C N   FP+ L
Sbjct: 1096 DGTTIKEIPSSISHLRGLHTLSLYQCKNLVNLPESICNLTSLKNLGVRRCPNFNKFPDNL 1155

Query: 560  EKMEHLKRIYSDRTPIT--ELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILA 617
             ++  LK ++         +LP S   L  L++L +  C+ L  +P  I  L  L  +  
Sbjct: 1156 GRLRSLKSLFISHLDSMDFQLP-SLSGLCSLKLLMLHACN-LREIPSGIYYLSSLVLLYL 1213

Query: 618  AASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
              +  S++P  ++    L+ LD SHCK L+  P
Sbjct: 1214 GRNHFSRIPDGISQLYNLKLLDLSHCKMLQHIP 1246



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 105/239 (43%), Gaps = 34/239 (14%)

Query: 575  ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
            +T LPSS      L  L    CS+L++ P+ +  +E L  +    + I ++PSS++    
Sbjct: 1053 LTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLDGTTIKEIPSSISHLRG 1112

Query: 635  LRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNN 692
            L +L    CK L + P +   L  L  +G+    ++   + P  +  L SL+ L++S   
Sbjct: 1113 LHTLSLYQCKNLVNLPESICNLTSLKNLGVRRCPNF--NKFPDNLGRLRSLKSLFIS--- 1167

Query: 693  FESLPAIIKQMSQLRFIHLEDFNMLQSLPELP-LC-LKYLHLIDCKMLQSLP--VLPFCL 748
                             HL+  +    LP L  LC LK L L  C  L+ +P  +     
Sbjct: 1168 -----------------HLDSMDF--QLPSLSGLCSLKLLMLHACN-LREIPSGIYYLSS 1207

Query: 749  ESLDLTGCNMLRSLPE---LPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSL 804
              L   G N    +P+       L+ L+L  C ML+ +PELP  L  L V NC  L++L
Sbjct: 1208 LVLLYLGRNHFSRIPDGISQLYNLKLLDLSHCKMLQHIPELPSSLMYLDVHNCTSLENL 1266



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 153/370 (41%), Gaps = 73/370 (19%)

Query: 578 LPSSFENLPGLEVLFVE-DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
           LP  FE     E+ ++  D   L++LP N  + + L  +L   S I QL     L + LR
Sbjct: 570 LPRDFE-FSSYELTYLHWDGYPLESLPMNFHA-KNLVELLLRNSNIKQLWRGNKLHDKLR 627

Query: 637 SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL 696
            +D S+   L   P       S++  L I     R  P+    +  L +L LSG     L
Sbjct: 628 VIDLSYSVHLIRIP-----DFSSVPNLEILTLEER-FPEIKGNMRELRVLDLSGTAIMDL 681

Query: 697 PAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGC 756
           P+ I  ++ L+ + LE+ + L  +P   +C           L SL VL       DL  C
Sbjct: 682 PSSITHLNGLQTLLLEECSKLHKIPS-HIC----------HLSSLKVL-------DLGHC 723

Query: 757 NMLRSLPELPLC----LQYLNLEDCNMLRSLP----ELPLCLQLLTVRNCNRLQSLPEIL 808
           N++       +C    LQ LNLE      S+P    +L   L++L + +C+ L+ +PE+ 
Sbjct: 724 NIMEGGIPSDICHLSSLQKLNLER-GHFGSIPTTINQLSR-LEILNLSHCSNLEQIPELP 781

Query: 809 LCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIR 868
             L+ LDA    ++S  +P L      L S   CF +   LK                  
Sbjct: 782 SRLRLLDAHGSNRISSRAPFL-----PLHSLVNCFSWARVLK------------------ 818

Query: 869 HMAIASLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLPPHSSCRN 927
                        + ++     +G+ IVLPGS  IP+W  +  +   I  +LP +    N
Sbjct: 819 -----------STSFSDSSYHGKGTCIVLPGSAGIPEWIMHWRNRCFISTELPQNWHQNN 867

Query: 928 -LIGFAFCAV 936
             +GFA C V
Sbjct: 868 EFLGFAICCV 877



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 152/371 (40%), Gaps = 51/371 (13%)

Query: 597  SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
            S ++ +P     LE     L     ++ LPSS+     L +L  S C  LESFP   L  
Sbjct: 1028 SDMNEVPIIENPLELDSLCLRNCKNLTSLPSSIFGFKSLATLSCSGCSQLESFPE-ILQD 1086

Query: 657  LSAMGLLHISDYAVREIPQEIAYLSSLEILYL-SGNNFESLPAIIKQMSQLRFIHLEDFN 715
            + ++  L++    ++EIP  I++L  L  L L    N  +LP  I  ++ L+ + +    
Sbjct: 1087 MESLRKLYLDGTTIKEIPSSISHLRGLHTLSLYQCKNLVNLPESICNLTSLKNLGVRRCP 1146

Query: 716  MLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP-LC-LQYLN 773
                 P+        +L   + L+SL +    L+S+D         LP L  LC L+ L 
Sbjct: 1147 NFNKFPD--------NLGRLRSLKSLFISH--LDSMDF-------QLPSLSGLCSLKLLM 1189

Query: 774  LEDCNMLRSLPE--LPLCLQLLTVRNCNRLQSLPE---ILLCLQELDASVLEKLSKHSPD 828
            L  CN LR +P     L   +L     N    +P+    L  L+ LD S       H   
Sbjct: 1190 LHACN-LREIPSGIYYLSSLVLLYLGRNHFSRIPDGISQLYNLKLLDLS-------HCKM 1241

Query: 829  LQWAPESLKSAAICFEFTNCLKL-NGKANNKILADSLLRIRHMAIASLRLGYEMAINEKL 887
            LQ  PE L S+ +  +  NC  L N  + + +L  SL +     I     G         
Sbjct: 1242 LQHIPE-LPSSLMYLDVHNCTSLENLSSQSNLLWSSLFKCFKSQIQGREFGL-------- 1292

Query: 888  SELRGSLIVLPGSEIPDWFSNQSSGSSICIQLP-PHSSCRNLIGFAFCAVLDSKKVDSDC 946
                  +       IP+W S+Q SG  I ++LP       + +GF  C++    ++++  
Sbjct: 1293 ------VRTFIAESIPEWISHQKSGFKITMKLPWSWYENDDFLGFVLCSLYIPLEIETTT 1346

Query: 947  FRYFYVSFQFD 957
             R F    +FD
Sbjct: 1347 RRRFNYKLKFD 1357


>gi|332330345|gb|AEE43931.1| TIR-NBS-LRR resistance protein muRdr1G [Rosa multiflora]
          Length = 1141

 Score =  323 bits (828), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 316/1073 (29%), Positives = 474/1073 (44%), Gaps = 227/1073 (21%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +++SD V+ +GIWGMGG+GKTTLA+ ++++ SH+FE   F+++VR  S T G L +LQKQ
Sbjct: 211  IEASD-VRFIGIWGMGGLGKTTLARLVYEKISHQFEVCVFLTNVREVSATHG-LVYLQKQ 268

Query: 61   MLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            +LS  L E+           T  K       +++VLDDV++  QL+ L GE D FG  SR
Sbjct: 269  ILSHILKEENAQVWNVYSGITMIKRCFCNKAVILVLDDVDQSEQLEHLAGEKDWFGLRSR 328

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            I+ TTR++RVL    G EK  Y + GL   EA + F   AF++    ED     +S V +
Sbjct: 329  IIFTTRNQRVLVT-HGVEKP-YELKGLNNAEALQLFSWKAFRKCEPEEDYAELCKSFVMH 386

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL L+ LGS L  +    W   L  L    +     ++D+LK+S++ L    K IF
Sbjct: 387  AGGLPLALKTLGSFLYKRSPDAWNSALAKLRNTPDK---TVFDMLKVSYDGLDEMEKKIF 443

Query: 239  LDIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQI 294
            LDIACF       F+  +L   D      +++L+++SL++IS N  + MHD+++EMG +I
Sbjct: 444  LDIACFSSQCQAKFIIELLYSYDVCIGIAIEVLVERSLLTISSNNEIGMHDLIREMGCEI 503

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            VRQ+S +EPG  SRLW   +I  V   N GT+AIEGIFL L K++  + +P AF+ M NL
Sbjct: 504  VRQQSPEEPGGCSRLWLRNDIFHVFTKNTGTEAIEGIFLHLHKLEEADWNPEAFSKMCNL 563

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            +L   +                       ++L  G  +LP  LR L W  YP ++LP  F
Sbjct: 564  KLLYIH----------------------NLRLSLGPKFLPDALRILKWSWYPSKSLPPGF 601

Query: 415  KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
            +P    EL+   S ++  W G              L  L                     
Sbjct: 602  QPD---ELSFVHSNIDHLWNG-------------ILGHLK-------------------- 625

Query: 475  TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            +I  SY +NLI  P  +G                     + +LE L L GC  L +I  S
Sbjct: 626  SIVLSYSINLIRTPDFTG---------------------IPNLEKLVLEGCTNLVKIHPS 664

Query: 535  FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
               L+ L                   K+ + +   S +T    LPS   N+  LE   V 
Sbjct: 665  IALLKRL-------------------KIWNFRNCKSIKT----LPSEV-NMEFLETFDVS 700

Query: 595  DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA-LSNMLRSLDSSHCKGLESFPRTF 653
             CSKL  +P+ +G  + L  +    +A+ +LPSS+  LS  L  LD              
Sbjct: 701  GCSKLKMIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLSESLVGLD-------------- 746

Query: 654  LLGLSAMGLLHISDYAVREIPQEI----AYLSSLEILYLSGNNFESLP--AIIKQMSQLR 707
                       +S   +RE P  +      ++S   L+   ++   +P  A +K  S L+
Sbjct: 747  -----------LSGIVIREQPYSLFLKQNVIASSLGLFPRKSHHPLIPVLASLKHFSSLK 795

Query: 708  FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP- 766
             ++L D N+ +   E+P  +  L  ++C               L+L G N + SLP    
Sbjct: 796  ELNLNDCNLCEG--EIPNDIGSLSSLEC---------------LELGGNNFV-SLPASIH 837

Query: 767  -LC-LQYLNLEDCNMLRSLPELPLCLQL-LTVRNCNRLQSLPEILLCLQELDASVLEKLS 823
             LC L  +N+E+C  L+ LPELP+   L +T  NC  LQ  PE+                
Sbjct: 838  LLCRLGSINVENCKRLQQLPELPVSGSLRVTTVNCTSLQVFPEL---------------- 881

Query: 824  KHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKI----LADSLLRIRHMAIASLRLGY 879
               PDL       + +A      NCL   G  +       + + LL +  ++++      
Sbjct: 882  --PPDL------CRLSAFSLNSVNCLSTIGNQDASFFLYSVINRLLEVISLSLSLSLSLS 933

Query: 880  EMAINEKLSELRGSL----IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCA 935
                  +  E   S      ++PGSEIP+WF+NQS+G S+  +LP  +     IGFA CA
Sbjct: 934  LSLSLSRSLETHLSFEFLNFLIPGSEIPEWFNNQSAGDSVTEKLPWDACNSKWIGFAVCA 993

Query: 936  VLDSKKVDSDCFRYFYVSFQFDLEIKT-LSETKHVDLGYNSRYIEDL----IDSDRVILG 990
            ++  +   S       V    DL+  T L      + G N      L     DSD + L 
Sbjct: 994  LIVPQDNPS------AVPEDPDLDPDTCLISCNWSNYGINGVVGRGLCVRQFDSDHLWLL 1047

Query: 991  FKP--------CLNVGFPDGYHHTIATFKFFAERKFYKIKRCGLCPVYANPSE 1035
              P        C  V F         T +     +  K+K+CG+  +Y   +E
Sbjct: 1048 VLPSPFRKPKNCREVNF------VFQTARAVGNNRCMKVKKCGVRALYEQDTE 1094


>gi|358343904|ref|XP_003636035.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
 gi|355501970|gb|AES83173.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
          Length = 977

 Score =  323 bits (828), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 250/747 (33%), Positives = 376/747 (50%), Gaps = 107/747 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  VQI+G+WGMGGIGKTTLA A+F + S +++GSCF   V   S++ G + +   ++L 
Sbjct: 55  STEVQIIGLWGMGGIGKTTLATAMFQRVSFKYDGSCFFEKVTEVSKSHG-INYTCNKLLC 113

Query: 64  TTLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF-GQGSRIVV 121
             L E L++  P  I    + R++ MK  IVLDDV+    L+ LIG    + G GS ++V
Sbjct: 114 KLLKEDLDIDTPKLISSMIRRRLKSMKSFIVLDDVHNSELLQNLIGVGHGWLGSGSTVIV 173

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRDK VL    G  K IY V  +    +   F   AF +    +     S+  + Y +G
Sbjct: 174 TTRDKHVL--ISGGIKTIYEVKKMNSRNSLRIFSLNAFDKVSPKDGYVELSKRAIDYARG 231

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
           NPL L+VLGS L  K +  W   L  L ++  +EI  I+   ++SFN+L    ++IFLDI
Sbjct: 232 NPLALKVLGSLLRCKSEKEWDCALDKLKKMPNNEIDSIF---RMSFNELDKTEQNIFLDI 288

Query: 242 ACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQ 297
           ACFF+G++++ +  IL++    +D+ +  L+DK+LV + S N + MH ++QEMG+QIVR+
Sbjct: 289 ACFFKGQERNSITKILNECGFFADIGISHLLDKALVRVDSENCIQMHGLIQEMGKQIVRE 348

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
           ES K PG+RSRL DP+E+  VLK+N+G++ +E IFLD +K   + L   AF  M NLRL 
Sbjct: 349 ESLKNPGQRSRLCDPEEVYDVLKNNRGSEKVEVIFLDATKYTHLILRSDAFEKMENLRL- 407

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
                          ++ ++      + LP+GL  LP+ LRY+ WD YPL+T+P     +
Sbjct: 408 ---------------LAVQDHKGVKSISLPDGLGLLPENLRYILWDGYPLKTVPLTSSLE 452

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
            LVEL+L+ S VE+ W G        + N   L  +   G +                  
Sbjct: 453 MLVELSLKQSHVEKLWNG--------VVNLPNLEIIDLSGSK------------------ 486

Query: 478 FSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
                 +IE P +SG                     L DLE L +  CK LK +S++ C 
Sbjct: 487 -----KMIECPNVSGSPN------------------LKDLERLIMNRCKSLKSLSSNTCS 523

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF---ENLPGLEVLFVE 594
             +L  L ++ C+NL+ F      ++    +Y       ELPSS    +NL G     + 
Sbjct: 524 -PALNFLNVMDCINLKEFSIPFSSVDL--SLYFTEWDGNELPSSILHTQNLKGFG-FPIS 579

Query: 595 DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
           DC  L +LP N     +   I  ++   S+  S + L  +L S          +F    +
Sbjct: 580 DC--LVDLPVN-----FCNDIWLSSPLNSEHDSFITLDKVLSS---------PAFVSVKI 623

Query: 655 LGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDF 714
           L    + +L        EIP  I+ LSSLE L L      SLP  IK + +L  +++   
Sbjct: 624 LTFCNINIL-------SEIPNSISLLSSLETLRLIKMPIISLPETIKYLPRLIRVNVYYC 676

Query: 715 NMLQSLPELPLCLKYLHLIDCKMLQSL 741
            +LQS+P L   +  L   DC+ L+ +
Sbjct: 677 ELLQSIPALQRFIPKLLFWDCESLEEV 703



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 144/689 (20%), Positives = 268/689 (38%), Gaps = 168/689 (24%)

Query: 444  IQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF----SYCVNLIEFPQISGKVTRLYL 499
            ++N + L+    KG +S+ S P  L  + P  + +     Y +  +        +  L L
Sbjct: 402  MENLRLLAVQDHKGVKSI-SLPDGLGLL-PENLRYILWDGYPLKTVPLTSSLEMLVELSL 459

Query: 500  GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
             QS +E++ + +  L +LE++DL G K++                  + C N+   P   
Sbjct: 460  KQSHVEKLWNGVVNLPNLEIIDLSGSKKM------------------IECPNVSGSP--- 498

Query: 560  EKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAA 619
              ++ L+R+  +R    +  SS    P L  L V DC  L        S++   Y     
Sbjct: 499  -NLKDLERLIMNRCKSLKSLSSNTCSPALNFLNVMDCINLKEFSIPFSSVDLSLYFTEWD 557

Query: 620  SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
               ++LPSS+        L + + KG   FP              ISD  V ++P  + +
Sbjct: 558  G--NELPSSI--------LHTQNLKGF-GFP--------------ISDCLV-DLP--VNF 589

Query: 680  LSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE--DFNMLQSLPELPLCLKYLHLIDCKM 737
             + + +     +  +S   + K +S   F+ ++   F  +  L E+P  +  L  ++   
Sbjct: 590  CNDIWLSSPLNSEHDSFITLDKVLSSPAFVSVKILTFCNINILSEIPNSISLLSSLETLR 649

Query: 738  LQSLPVLPFCLESLDLTGCNMLRSLPE----LPLCLQYLNLEDCNMLRSLPELPLCLQLL 793
            L  +P++                SLPE    LP  ++ +N+  C +L+S+P L   +  L
Sbjct: 650  LIKMPII----------------SLPETIKYLPRLIR-VNVYYCELLQSIPALQRFIPKL 692

Query: 794  TVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNG 853
               +C            L+E+ +S  E   K +P             +     NC++L+ 
Sbjct: 693  LFWDCES----------LEEVFSSTSEPYDKPTP-------------VSTVLLNCVELDP 729

Query: 854  KANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPG-SEIPDWFSNQSSG 912
             +   +L DS+          + LG     N +  +    +I++P    + +WF   S+ 
Sbjct: 730  HSYQTVLKDSM--------GGIELGARK--NSENEDAHDHIILIPAMPGMENWFHYPSTE 779

Query: 913  SSICIQLPPHSSCRNLIGFAFCAVLDSKKV-------------DSDCFRYFYVSFQ---- 955
             S+ ++LP      NL+GFA+  VL    +             +S   R    SF+    
Sbjct: 780  VSVTLELP-----SNLLGFAYYVVLSQGHMGFDVGFGCECNLENSSGERICITSFKRLNI 834

Query: 956  -----FDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATF 1010
                  D  I  +S+  H+ + Y+ R  + ++D+    +     ++ G    Y   + TF
Sbjct: 835  KKCDWTDTSIDMMSD--HLLVWYDPRSCKQIMDA----VEQTKAISDGNSTSYTPKL-TF 887

Query: 1011 KFFAERKFY---KIKRCGLCPVY------ANPSETKD-------NTFTINFATEVWKLDD 1054
             FF +   Y   +IK CG   +Y      +  SE+ D       + F  N   E+     
Sbjct: 888  TFFIDETLYDEVEIKECGFRWIYQEETVSSTISESNDEEETLSSSDFQSNEQEEI----- 942

Query: 1055 LPSASGTLDVEELELSPKRICRANQINTP 1083
            +P+ S   D  E  + P++  + + + TP
Sbjct: 943  VPATSFESDDLEETIPPRKKLKIDIVGTP 971


>gi|82542039|gb|ABB82027.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1120

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 247/758 (32%), Positives = 380/758 (50%), Gaps = 113/758 (14%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           +++D V+IVGI GM GIGKTT+AK +F+Q  + F+GSCF+SD+   S+   GL  LQK++
Sbjct: 208 NATDDVRIVGIHGMPGIGKTTIAKVVFNQLCNGFDGSCFLSDINERSKQVNGLALLQKRL 267

Query: 62  LSTTLSEKLEVAGPNIPH----FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           L   L  K + A  +         KER+ R ++L+V DDV    QLK L+G+   FG GS
Sbjct: 268 LHDIL--KQDAANFDCVDRGKVLIKERLCRKRVLVVADDVAHQDQLKALMGDRSWFGPGS 325

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           R+++TTR+  +L K      + Y++  L  +++ + F   AF++    ED    S+  V 
Sbjct: 326 RVIITTRNSNLLRK----ADRTYQIEELTRDQSLQLFSWHAFEDTKPAEDYIELSKKAVD 381

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKS 236
           Y  G PL L+V+G+ L  K +  W  V+  L RI     HDI   L+IS++ L    +K+
Sbjct: 382 YCGGLPLALDVMGACLSGKNRDGWKSVIDKLKRIPN---HDIQRKLRISYDLLDGEELKN 438

Query: 237 IFLDIACFFEGEDKDFVASILD-----DSESDVLDILIDKSLVSISGNFLNMHDILQEMG 291
            FLDIACFF    K+++A +L      + E D L  L ++SL+ + G  + MHD+L++MG
Sbjct: 439 AFLDIACFFIDRKKEYIAKLLGARCGYNPEVD-LQTLHERSLIKVLGETVTMHDLLRDMG 497

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R++VR+   KEPGKR+R+W+ ++   VL+  KGT+ +EG+ LD+   +  +L   +F  M
Sbjct: 498 REVVRESPPKEPGKRTRIWNQEDAWNVLQQQKGTEVVEGLKLDVRASETKSLSTGSFAKM 557

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
             L L                      L  +   L      L K+L ++ W  +PL+  P
Sbjct: 558 KGLNL----------------------LQINGAHLTGSFKLLSKELMWICWHEFPLKYFP 595

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
           S+F   NL  L+++ S +++ W+G+K      I                           
Sbjct: 596 SDFTLDNLAVLDMQYSNLKELWKGKKILDKLKI--------------------------- 628

Query: 472 CPVTINFSYCVNLIEFPQI-SGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
               +N S+  +LI+ P + S  + +L L G S++ EV  SIE LT L  L+L+GC  LK
Sbjct: 629 ----LNLSHSQHLIKTPDLHSSSLEKLILEGCSSLVEVHQSIENLTSLVFLNLKGCWSLK 684

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
            +  S   ++SL TL + GC  +E  PE +  ME L  + +D     +  SS   L    
Sbjct: 685 TLPESIDNVKSLETLNISGCSQVEKLPERMGDMEFLTELLADGIENEQFLSSIGQL---- 740

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALS----NMLRSLDSSHCKG 645
               + C +L    D+                 S  PSS  +S    N  R L +S  + 
Sbjct: 741 ----KHCRRLSLCGDS-----------------STPPSSSLISTGVLNWKRWLPASFIEW 779

Query: 646 LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQ 705
           +        L LS  GL   SD A   +  + + LS+LE L L GN F SLP+ I  +S+
Sbjct: 780 IS----VKHLELSNSGL---SDRATNCV--DFSGLSALEKLTLDGNKFSSLPSGIGFLSE 830

Query: 706 LRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPV 743
           LR + ++    L S+P+LP  LK L   DCK L+ + +
Sbjct: 831 LRELSVKGCKYLVSIPDLPSSLKRLGACDCKSLKRVRI 868


>gi|105922557|gb|ABF81423.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1359

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 222/628 (35%), Positives = 330/628 (52%), Gaps = 67/628 (10%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
            KTT+A+ ++D+F  +F+GSCF+++VR       G   LQ+Q+LS  L E+  +   +   
Sbjct: 551  KTTVARVVYDRFHWQFKGSCFLANVREVFVEKDGPRRLQEQLLSEILMERANICDSSRGI 610

Query: 79   HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
               K R++  K+ +VLDDV++  QL+ L  E   FG GSRI++T RD++VL   R    +
Sbjct: 611  EMIKRRLQHKKIRVVLDDVDDHKQLESLAAESKWFGPGSRIIITGRDRQVLT--RNGVAR 668

Query: 139  IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            IY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV+GS +  +  
Sbjct: 669  IYEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFMHGRSI 728

Query: 199  SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
              WG  ++ LN I + EI    D+L+ISF+ L    K IFLDIACF +G  KD +  ILD
Sbjct: 729  LEWGSAINRLNEIPDREI---IDVLRISFDGLHELEKKIFLDIACFLKGFKKDRIIRILD 785

Query: 259  DSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                       +LI+KSL+S+S + + MH++LQ MG++IVR ES +EPG+RSRLW   ++
Sbjct: 786  SCGFHAHIGTQVLIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYADV 845

Query: 316  SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
               L  N G + IE IFLD+  IK    +  +F+ MS LRL K                 
Sbjct: 846  CLALMDNTGKEKIEAIFLDMPGIKESQWNMESFSKMSRLRLLKI---------------- 889

Query: 376  EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
                  + VQL  G + +  KL++L W +YPL++LP   +   LVEL++  S +EQ W G
Sbjct: 890  ------NNVQLSEGPEDISNKLQFLEWHSYPLKSLPVGLQVDQLVELHMANSSIEQLWYG 943

Query: 436  EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG--K 493
                         Y SA++ K                   IN S  +NLI+ P  +G   
Sbjct: 944  -------------YKSAVNLK------------------IINLSNSLNLIKTPDFTGIPN 972

Query: 494  VTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
            +  L L G +++ EV  S+     L+ ++L  CK + RI  +  ++ SL   IL GC  L
Sbjct: 973  LKNLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSI-RILPNNLEMGSLKVCILDGCSKL 1031

Query: 553  EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
            E FP+I+  M  L  +  D T IT+L SS  +L GL +L + +C  L+++P +IG L+ L
Sbjct: 1032 EKFPDIVGNMNCLTVLRLDGTGITKLSSSMHHLIGLGLLSMNNCKNLESIPSSIGCLKSL 1091

Query: 613  YYI-LAAASAISQLPSSVALSNMLRSLD 639
              + L+  S +  +P  +     L  LD
Sbjct: 1092 KKLDLSGCSELKYIPEKLGKVESLEELD 1119



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 143/313 (45%), Gaps = 49/313 (15%)

Query: 646  LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQ 705
            +ESF +     +S + LL I++  + E P++I+  + L+ L       +SLP  + Q+ Q
Sbjct: 875  MESFSK-----MSRLRLLKINNVQLSEGPEDIS--NKLQFLEWHSYPLKSLPVGL-QVDQ 926

Query: 706  LRFIHLEDFNMLQSLP--ELPLCLKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRS 761
            L  +H+ + ++ Q     +  + LK ++L +   L   P       L++L L GC  L  
Sbjct: 927  LVELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLIKTPDFTGIPNLKNLILEGCTSLSE 986

Query: 762  L-PELPLC--LQYLNLEDCNMLRSLPE-LPL-CLQLLTVRNCNRLQSLPEIL-----LCL 811
            + P L     LQY+NL +C  +R LP  L +  L++  +  C++L+  P+I+     L +
Sbjct: 987  VHPSLAHHKKLQYMNLVNCKSIRILPNNLEMGSLKVCILDGCSKLEKFPDIVGNMNCLTV 1046

Query: 812  QELDASVLEKLSKHSPDLQWAP----------ESLKSAAICFEFTNCLKLNGKANNKILA 861
              LD + + KLS     L              ES+ S+  C +    L L+G +  K + 
Sbjct: 1047 LRLDGTGITKLSSSMHHLIGLGLLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKYIP 1106

Query: 862  DSLLRIRHMAIASLRLGYEMAINEKLSELR-GSLIVLPGSEIPDWFSNQ-----SSGSSI 915
            + L ++  +     R           S  R G  I +PG+EIP WF++Q       GS  
Sbjct: 1107 EKLGKVESLEELDCR-----------SNPRPGFGIAVPGNEIPGWFNHQKLKEWKHGSFS 1155

Query: 916  CIQLPPHSSCRNL 928
             I+L  HS  R +
Sbjct: 1156 NIELAFHSYERRV 1168



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/217 (20%), Positives = 94/217 (43%), Gaps = 19/217 (8%)

Query: 561  KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAAS 620
            +++ L  ++   + I +L   +++   L+++ + +   L   PD  G       IL   +
Sbjct: 923  QVDQLVELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLIKTPDFTGIPNLKNLILEGCT 982

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
            ++S++  S+A    L+ ++  +CK +   P    +G   + +L      + + P  +  +
Sbjct: 983  SLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNLEMGSLKVCILDGCS-KLEKFPDIVGNM 1041

Query: 681  SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
            + L +L L G     L + +  +  L  + + +   L+S+P    CLK            
Sbjct: 1042 NCLTVLRLDGTGITKLSSSMHHLIGLGLLSMNNCKNLESIPSSIGCLK------------ 1089

Query: 741  LPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDC 777
                   L+ LDL+GC+ L+ +PE    ++ L   DC
Sbjct: 1090 ------SLKKLDLSGCSELKYIPEKLGKVESLEELDC 1120


>gi|27764536|gb|AAO23066.1| R 3 protein [Glycine max]
          Length = 897

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 252/769 (32%), Positives = 374/769 (48%), Gaps = 118/769 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V I+GI GMGG+GKTTLA A+++  +  F+ SCF+ +VR  S    GL+HLQ  
Sbjct: 204 VGSHDVVHIIGIHGMGGLGKTTLALAVYNLIALHFDESCFLQNVREES-NKHGLKHLQSI 262

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +LS  L EK       +     I H    R++R K+L++LDDV++  QLK ++G  D FG
Sbjct: 263 ILSKLLGEKDINLTSWQEGASMIQH----RLQRKKVLLILDDVDKRQQLKAIVGRPDWFG 318

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFK-ENHCPEDLNWHSR 173
            GSR+++TTRDK +L+    E ++ Y V  L    A +     AFK E + P   +  +R
Sbjct: 319 PGSRVIITTRDKHILKYH--EVERTYEVKVLNQSAALQLLKWNAFKREKNDPSYEDVLNR 376

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            VV+Y  G PL LE++GS+L  K  + W   +    RI   EI    +ILK+SF+ L   
Sbjct: 377 -VVTYASGLPLALEIIGSNLFGKTVAEWESAMEHYKRIPSDEI---LEILKVSFDALGEE 432

Query: 234 VKSIFLDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQE 289
            K++FLDIAC  +G    E +  +  + D+     +D+L+DKSL  +    + MHD++Q+
Sbjct: 433 QKNVFLDIACCLKGCKLTEVEHMLRGLYDNCMKHHIDVLVDKSLTKVRHGIVEMHDLIQD 492

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS---KIKGINLDPR 346
           MGR+I RQ S +EPGKR RLW PK+I +VLKHN GT  IE I++D S   K + +  +  
Sbjct: 493 MGREIERQRSPEEPGKRKRLWSPKDIIQVLKHNTGTSKIEIIYVDFSISDKEETVEWNEN 552

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           AF  M NL++      KF                        G +Y P+ LR L W  YP
Sbjct: 553 AFMKMENLKILIIRNGKF----------------------SKGPNYFPQGLRVLEWHRYP 590

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQ-PWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
              LPSNF P NLV   L  S +    + G             +L+ L F  C+ L   P
Sbjct: 591 SNCLPSNFDPINLVICKLPDSSMTSFEFHGS--------SKLGHLTVLKFDWCKFLTQIP 642

Query: 466 SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
                     ++F +C +L+                     V  SI  L  L+ L+  GC
Sbjct: 643 DVSDLPNLRELSFQWCESLV--------------------AVDDSIGFLNKLKKLNAYGC 682

Query: 526 KRLKRISTSF--CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE 583
           ++L    TSF    L SL TL L  C +LE+FPEIL +ME+++R+     PI ELP SF+
Sbjct: 683 RKL----TSFPPLHLTSLETLELSHCSSLEYFPEILGEMENIERLDLHGLPIKELPFSFQ 738

Query: 584 NLPGLEVLFVEDCS------KLDNLPDNIGSLEYL----YYILAAASAISQLPSSVALSN 633
           NL GL+ L +  C        L  +P  + + +++    +  + +  A  ++ S ++   
Sbjct: 739 NLIGLQQLSMFGCGIVQLRCSLAMMP-KLSAFKFVNCNRWQWVESEEAEEKVGSIISSEA 797

Query: 634 ML--RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN 691
                S  + +C   + F   FL G                    + YL+      LS N
Sbjct: 798 RFWTHSFSAKNCNLCDDF---FLTGFKKFA--------------HVGYLN------LSRN 834

Query: 692 NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           NF  LP   K++  L  +++     LQ +  +P  L+  +  +C  L S
Sbjct: 835 NFTILPEFFKELQFLGSLNVSHCKHLQEIRGIPQNLRLFNARNCASLTS 883


>gi|38489219|gb|AAR21295.1| bacterial spot disease resistance protein 4 [Solanum lycopersicum]
          Length = 1146

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 266/794 (33%), Positives = 392/794 (49%), Gaps = 115/794 (14%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           + V+I+GIWG+GG+GKT +AKAIFD  S++FE SCF++DV+  ++    L  LQ  +LS 
Sbjct: 220 NDVRILGIWGIGGVGKTRIAKAIFDTLSYQFEASCFLADVKEFAK-KNKLHSLQNILLSE 278

Query: 65  TLSEKLEVAGPN------IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            L +K +           IP+    R+  +K+LIVLDD++   Q++ L G++  FG GSR
Sbjct: 279 LLRKKNDYVYNKYDGKCMIPN----RLCSLKVLIVLDDIDHGDQMEYLAGDICWFGNGSR 334

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           ++VTTR+K ++EK    +  IY V+ L   EA + F   AFK+    ED    +  +V++
Sbjct: 335 VIVTTRNKHLIEK----DDAIYEVSTLPDHEAMQLFNMHAFKKEVPNEDFKELALEIVNH 390

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
            KG PL L+V G  L  K  S W   +  + +   SEI    + LKIS++ L    + IF
Sbjct: 391 AKGLPLALKVWGCLLHKKNLSLWKITVEQIKKDSNSEI---VEQLKISYDGLESEEQEIF 447

Query: 239 LDIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQI 294
           LDIACFF GE +  V  IL   D      LD+LI+KSLV IS N  + MHD++++MGR +
Sbjct: 448 LDIACFFRGEKRKEVMQILKSCDFGAEYGLDVLINKSLVFISENDRIEMHDLIRDMGRYV 507

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V+ +  K   KRSR+WD ++   V+    GT  +E I+   S  + +  +  A   M  L
Sbjct: 508 VKMQ--KLQKKRSRIWDVEDFKEVMIDYTGTMTVEAIWF--SCFEEVRFNKEAMKKMKRL 563

Query: 355 RLFKFY--VPKFYEIEKLPSMST--EEQLSYSKV--QLPNGLDYLPKKLRYLHWDTYPLR 408
           R+   +    KF+      + +   EE  SY  V     + ++YL   LR+L W+ Y  +
Sbjct: 564 RILHIFDGFVKFFSSPPSSNSNDSEEEDDSYDLVVDHHDDSIEYLSNNLRWLVWNHYSWK 623

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
           +LP NFKP+ LV L LR S +   W+  +  +PS       L  L     +SL   P   
Sbjct: 624 SLPENFKPEKLVHLELRWSSLHYLWKKTEH-LPS-------LRKLDLSLSKSLVQTPDFT 675

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
                  +N  YC                    S +EEV  S+     L  L+L  C +L
Sbjct: 676 GMPNLEYLNLEYC--------------------SKLEEVHYSLAYCEKLIELNLSWCTKL 715

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE----- 583
           +R    +  + SL +L L  C  +  FPEI+  M+    I S  T ITELPSS +     
Sbjct: 716 RRFP--YINMESLESLDLQYCYGIMVFPEIIGTMKPELMILSANTMITELPSSLQYPTHL 773

Query: 584 ---NLPGLE----------------VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQ 624
              +L G+E                 L V  C  L +LP+ IG LE L  + A+ + ISQ
Sbjct: 774 TELDLSGMENLEALPSSIVKLKDLVKLNVSYCLTLKSLPEEIGDLENLEELDASRTLISQ 833

Query: 625 LPSSVALSNMLRSLDSSHCKGLES-----FPRTFLLGLSAMGLLHI--SDYAVREIPQEI 677
            PSS+   N L+SL       L       FP     GL ++ +L +  S++    IP++I
Sbjct: 834 PPSSIVRLNKLKSLKLMKRNTLTDDVCFVFPPVNN-GLLSLEILELGSSNFEDGRIPEDI 892

Query: 678 AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM 737
             LSSL+ L L G+NF  LP  I Q+  LRF++++D                     C+ 
Sbjct: 893 GCLSSLKELRLEGDNFNHLPQSIAQLGALRFLYIKD---------------------CRS 931

Query: 738 LQSLPVLPFCLESL 751
           L SLP  P  L+++
Sbjct: 932 LTSLPEFPPQLDTI 945


>gi|30684793|ref|NP_849410.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658793|gb|AEE84193.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1049

 Score =  322 bits (825), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 223/621 (35%), Positives = 326/621 (52%), Gaps = 62/621 (9%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            D+ + V++VG+ GM GIGKTT+A  ++ Q    F+G  F+ D+  NS+  G L +L ++
Sbjct: 208 FDNDECVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDIEDNSKRYG-LPYLYQK 266

Query: 61  MLSTTL-SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           +L   L  E ++V     P   +  +R  KL IVLD+V E  Q++ LIG+ + + QGSRI
Sbjct: 267 LLHKLLDGENVDVRAQGRP---ENFLRNKKLFIVLDNVTEEKQIEYLIGKKNVYRQGSRI 323

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           V+ TRDK++L+K        Y V  L   EA E FC   F  ++  E+    S   V Y 
Sbjct: 324 VIITRDKKLLQK---NADATYVVPRLNDREAMELFCLQVFGNHYPTEEFVDLSNDFVCYA 380

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           KG PL L++LG  L     ++W K L  L    + E+      LK S+  L    KS+FL
Sbjct: 381 KGLPLALKLLGKGLLTHDINYWKKKLEFLQVNPDKELQKE---LKSSYKALDDDQKSVFL 437

Query: 240 DIACFFEGEDKDFVASILDDSESDVLDI---LIDKSLVSISGNFLNMHDILQEMGRQIVR 296
           DIACFF  E  DFV+SIL   + D  D+   L +K LV+IS + + MHD+L  MG++I +
Sbjct: 438 DIACFFRSEKADFVSSILKSDDIDAKDVMRELEEKCLVTISYDRIEMHDLLHAMGKEIGK 497

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
           ++S ++ G+R RLW+ K+I  +L+HN GT+ + GIFL++S+++ I L P AFT +S L+ 
Sbjct: 498 EKSIRKAGERRRLWNHKDIRDILEHNTGTECVRGIFLNMSEVRRIKLFPAAFTMLSKLKF 557

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
            KF+           S   +    +   ++P   D+ P +L YLHW  YP   LPS+F P
Sbjct: 558 LKFHSSHC-------SQWCDNDHIFQCSKVP---DHFPDELVYLHWQGYPYDCLPSDFDP 607

Query: 417 KNLVELNLRCSKVEQPWEGEK----------------------------------ACVP- 441
           K LV+L+LR S ++Q WE EK                                   C   
Sbjct: 608 KELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRAKNLERLDLEGCTSL 667

Query: 442 ---SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLY 498
               S++    L  L+ + C SL S P         T+  S C+ L +F  IS  +  L+
Sbjct: 668 DLLGSVKQMNELIYLNLRDCTSLESLPKGFKIKSLKTLILSGCLKLKDFHIISESIESLH 727

Query: 499 LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
           L  +AIE V   IE L  L +L+L+ C++LK +     KL+SL  L+L GC  LE  P I
Sbjct: 728 LEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLKSLQELVLSGCSALESLPPI 787

Query: 559 LEKMEHLKRIYSDRTPITELP 579
            EKME L+ +  D T I + P
Sbjct: 788 KEKMECLEILLMDGTSIKQTP 808



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 159/381 (41%), Gaps = 75/381 (19%)

Query: 596 CSKL-DNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR-SLDSSHCKGL-ESFPRT 652
           CSK+ D+ PD       L Y+         LPS      ++  SL  SH K L E    T
Sbjct: 577 CSKVPDHFPDE------LVYLHWQGYPYDCLPSDFDPKELVDLSLRYSHIKQLWEDEKNT 630

Query: 653 FLLGLSAMG----LLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
             L    +G    LL++S          ++   +LE L L G     L   +KQM++L +
Sbjct: 631 ESLRWVDLGQSKDLLNLSG---------LSRAKNLERLDLEGCTSLDLLGSVKQMNELIY 681

Query: 709 IHLEDFNMLQSLPE--LPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP 766
           ++L D   L+SLP+      LK L L  C  L+   ++   +ESL L G  + R +  + 
Sbjct: 682 LNLRDCTSLESLPKGFKIKSLKTLILSGCLKLKDFHIISESIESLHLEGTAIERVVEHIE 741

Query: 767 --LCLQYLNLEDCNMLRSLPELPL---CLQLLTVRNCNRLQSLPEILLCLQELDASVLEK 821
               L  LNL++C  L+ LP        LQ L +  C+ L+SLP I   ++ L+  +++ 
Sbjct: 742 SLHSLILLNLKNCEKLKYLPNDLYKLKSLQELVLSGCSALESLPPIKEKMECLEILLMDG 801

Query: 822 LS-KHSPDLQWAPESLKSAAIC-------------------------------------- 842
            S K +P++     +LK  + C                                      
Sbjct: 802 TSIKQTPEMS-CLSNLKICSFCRPVIDDSTGLYLDAHGCGSLENVSKPLTIPLVTERMHT 860

Query: 843 -FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSE 901
            F FT+C KLN      I+A + L+ + +A  S    ++  + + L       +  PG +
Sbjct: 861 TFIFTDCFKLNQAEKEDIVAQAQLKSQLLARTSRHHNHKGLLLDPLVA-----VCFPGHD 915

Query: 902 IPDWFSNQSSGSSICIQLPPH 922
           IP WFS+Q  GS I   L PH
Sbjct: 916 IPSWFSHQKMGSLIETDLLPH 936


>gi|444739192|dbj|BAM77406.1| clubroot disease resistance protein [Brassica rapa]
          Length = 1224

 Score =  322 bits (825), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 304/1068 (28%), Positives = 502/1068 (47%), Gaps = 154/1068 (14%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNS-----ETAGGLEHLQ 58
            SD V+++GIWG  GIGK+T+A+++F Q S +F+ S F+ +++        +       LQ
Sbjct: 262  SDEVRMIGIWGPSGIGKSTIARSLFSQHSPDFQLSVFMENIKREYPRPCFDRYSAQVQLQ 321

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
             + LS  L++  +VA   I H    ++R++  K+L+VLDDV+   QL  L  E   FG G
Sbjct: 322  NKFLSLILNQN-DVA---IHHLGVAQDRLKNKKVLVVLDDVDHSAQLDALAKETCWFGSG 377

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SRI+VTT+DK++L   R     IY V     +EA E FC  AF +    +     +R V 
Sbjct: 378  SRIIVTTQDKKILNAHRINH--IYEVGFPHDDEALEIFCINAFGQKSPYDGFGDLAREVT 435

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
                  PL L V+GS      K  W + L  L    + E   I   LK S++ L    ++
Sbjct: 436  RLVGNLPLGLSVMGSYFKGLSKEVWERELPRLRTRLDGETESI---LKFSYDALCDEDQA 492

Query: 237  IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI-SGNFLNMHDILQEMGR 292
            +FL IACFF GE  D V   L +    V   L +L +KSL+S+ S  ++ MHD+L  +GR
Sbjct: 493  LFLHIACFFNGERTDKVEEFLAEKFVAVEGRLRVLAEKSLISVGSEGYIRMHDLLARLGR 552

Query: 293  QIVRQESEKEPGKRSRLWDPKEISRVLKHNK-GTDAIEGIFLDLSKIKGINLDPRAFTNM 351
            +IVR++S  EPG+R  L D  +I +VL+ +  G+ ++ GI   L K   + +  +AF  M
Sbjct: 553  EIVRKQSPNEPGQRQFLVDDGDIRQVLRDDTLGSRSVIGINFLLKK--KLKISDQAFERM 610

Query: 352  SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            SNL+  +     F +I      S++  L          ++ LP+++R L W T+P+  LP
Sbjct: 611  SNLQFLRLDSQYFAQI-LFEGKSSQYILE--------SVNCLPREVRLLDWRTFPMTCLP 661

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY--------------------LS 451
            S+F P+ L+E+ + CS +E+ WEG K     +I+N K+                    L 
Sbjct: 662  SDFNPELLMEIKMICSNLEKLWEGNK-----TIRNLKWMDLSHSKNLKELPNLSTATNLR 716

Query: 452  ALSFKGCQSLRSFPSNLHFVCPVT-INFSYCVNLIEFPQISGKVTRL----YLGQSAIEE 506
             L+  GC SL   PS++  +  +  +N   C +L+E P   G +T L      G S++ E
Sbjct: 717  ELNLFGCSSLMELPSSIGNLTNLKKLNLKLCSSLMELPSSIGNMTNLENLNLSGCSSLVE 776

Query: 507  VPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLK 566
            +PSSI  +T+LE  +L  C  + R+S S   + +L  L L  C +L         M +LK
Sbjct: 777  LPSSISNMTNLENFNLSQCSSVVRLSFSIGNMTNLKELELNECSSLVEL--TFGNMTNLK 834

Query: 567  RIYSDR-TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQ 624
             +  +R + + E+ SS  N+  L  L +  CS L  LP +IG++  L  + L+  S++ +
Sbjct: 835  NLDPNRCSSLVEISSSIGNMTNLVRLDLTGCSSLVELPYSIGNMTNLETLELSGCSSLVE 894

Query: 625  LPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLE 684
            LPSS+   + L+ L+  +C  L + P    + + ++  L +S  +V +   EI+  +++ 
Sbjct: 895  LPSSIGNLHNLKRLNLRNCSTLMALPVN--INMKSLDFLDLSYCSVLKSFPEIS--TNII 950

Query: 685  ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
             L + G   E +P  I+  S+L  + +     L+        +  LHL D  + +  P +
Sbjct: 951  FLGIKGTAIEEIPTSIRSWSRLDTLDMSYSENLRKSHHAFDLITNLHLSDTGIQEISPWV 1010

Query: 745  PFC--LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQ 802
                 L  L + GC  L SLP+LP  L+++++E+C  L  L  L          +C+  +
Sbjct: 1011 KEMSRLRELVINGCTKLVSLPQLPDSLEFMHVENCESLERLDSL----------DCSFYR 1060

Query: 803  SLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILAD 862
            +                 KL+    DL+              F NCLKLN +A + IL  
Sbjct: 1061 T-----------------KLT----DLR--------------FVNCLKLNREAVDLILKT 1085

Query: 863  SLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPH 922
            S    +  AI                         PG  +P +FS +++GSS+ ++L   
Sbjct: 1086 S---TKIWAI------------------------FPGESVPAYFSYRATGSSVSMKLNRF 1118

Query: 923  SS-CRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDL 981
             +     + F  C +L +   D +   ++     + +  K       V L Y   +    
Sbjct: 1119 DTRFPTSLRFKACILLVTNPDDVEPAAWYRSDMSYCINGKL--RDAGVFLAYTHIWDPLR 1176

Query: 982  IDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGLCPV 1029
              S+ +++       + F +        F+F  E++ ++IK CGL P+
Sbjct: 1177 PRSEHLVV-------IEFEETVTSPELVFEFRFEKENWEIKECGLRPL 1217


>gi|15227238|ref|NP_179024.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251184|gb|AEC06278.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1215

 Score =  322 bits (825), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 287/949 (30%), Positives = 461/949 (48%), Gaps = 137/949 (14%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVR------GNSETAGGLEHLQKQ 60
            V+++GIWG  GIGKTT+ + +++Q S  FE S F+ +++       +S+       LQ+Q
Sbjct: 251  VRMIGIWGPPGIGKTTIVRFLYNQLSSSFELSIFMENIKTMHTILASSDDYSAKLILQRQ 310

Query: 61   MLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
             LS  L  K       IPH    +ER+   K+L+VLDDV++  QL  L  E   FG  SR
Sbjct: 311  FLSKILDHK----DIEIPHLRVLQERLYNKKVLVVLDDVDQSVQLDALAKETRWFGPRSR 366

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            I++TT+D+++L+  R     IY+V+    ++A + FC +AF +   P D  +     V++
Sbjct: 367  ILITTQDRKLLKAHRI--NNIYKVDLPNSDDALQIFCMYAFGQK-TPYDGFYKLARKVTW 423

Query: 179  TKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
              GN PL L V+GS      K  W K +  L    + +I  +   LK S++ L    K +
Sbjct: 424  LVGNFPLGLRVVGSYFREMSKQEWRKEIPRLRARLDGKIESV---LKFSYDALCDEDKDL 480

Query: 238  FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQI 294
            FL IACFF  E  + +   L  +  D+     +L +KSL+SI+ NF+ MHD L ++G++I
Sbjct: 481  FLHIACFFNHESIEKLEDFLGKTFLDIAQRFHVLAEKSLISINSNFVEMHDSLAQLGKEI 540

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHN-KGTDAIEGIFLDLSKIKGI-NLDPRAFTNMS 352
            VR++S +EPG+R  L D ++IS VL  +  G  ++ GI+LDL +   + N+  +AF  MS
Sbjct: 541  VRKQSVREPGQRQFLVDARDISEVLADDTAGGRSVIGIYLDLHRNDDVFNISEKAFEGMS 600

Query: 353  NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            NL+  +  V  F  +   P++          V LP+ L Y+ +KLR L W  +P+   PS
Sbjct: 601  NLQFLR--VKNFGNL--FPAI----------VCLPHCLTYISRKLRLLDWMYFPMTCFPS 646

Query: 413  NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
             F P+ LVELN+  SK+E+ WE         IQ  + L  +     ++L+  P       
Sbjct: 647  KFNPEFLVELNMWGSKLEKLWE--------EIQPLRNLKRMDLFSSKNLKELPDLSSATN 698

Query: 473  PVTINFSYCVNLIEFPQISGKVTRLYL----GQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
               +N + C +L+E P   G  T+L      G S++ E+PSSI    +L+ +D   C+ L
Sbjct: 699  LEVLNLNGCSSLVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENL 758

Query: 529  KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSD-RTPITELPSSFENLPG 587
              + +S     +L  L L  C +L+  P  +    +LK+++    + + ELPSS  N   
Sbjct: 759  VELPSSIGNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTN 818

Query: 588  LEVLFVEDCSKLDNLPDNIG---SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
            L+ L +  CS L  LP +IG   +LE L  ILA   ++ +LPS +  +  L+ L+     
Sbjct: 819  LKELHLTCCSSLIKLPSSIGNAINLEKL--ILAGCESLVELPSFIGKATNLKILN----- 871

Query: 645  GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQM 703
                           +G L      + E+P  I  L  L  L L G    + LP  I  +
Sbjct: 872  ---------------LGYLS----CLVELPSFIGNLHKLSELRLRGCKKLQVLPTNI-NL 911

Query: 704  SQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM------LQSLPVLPFCLESLDLTGCN 757
              L  + L D  +L++ P +   +K LHL   ++      L+S P     LE L +    
Sbjct: 912  EFLNELDLTDCILLKTFPVISTNIKRLHLRGTQIEEVPSSLRSWPR----LEDLQMLYSE 967

Query: 758  MLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQL--LTVRNCNRLQSLPEI---LLCLQ 812
             L     +   +  L L D N+    P L    +L  L +  C +L SLP++   L+ L 
Sbjct: 968  NLSEFSHVLERITVLELSDINIREMTPWLNRITRLRRLKLSGCGKLVSLPQLSDSLIILD 1027

Query: 813  ELDASVLEKL--SKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHM 870
              +   LE+L  S ++P+++           C +FTNCLKL+ +A + I+  +    RH 
Sbjct: 1028 AENCGSLERLGCSFNNPNIK-----------CLDFTNCLKLDKEARDLIIQAT---ARHY 1073

Query: 871  AIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
            +I                        LP  E+ ++ +N++ GSS+ ++L
Sbjct: 1074 SI------------------------LPSREVHEYITNRAIGSSLTVKL 1098


>gi|2853078|emb|CAA16928.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|7268747|emb|CAB78953.1| TMV resistance protein N-like [Arabidopsis thaliana]
          Length = 1164

 Score =  322 bits (824), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 223/621 (35%), Positives = 326/621 (52%), Gaps = 62/621 (9%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            D+ + V++VG+ GM GIGKTT+A  ++ Q    F+G  F+ D+  NS+  G L +L ++
Sbjct: 215 FDNDECVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDIEDNSKRYG-LPYLYQK 273

Query: 61  MLSTTL-SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           +L   L  E ++V     P   +  +R  KL IVLD+V E  Q++ LIG+ + + QGSRI
Sbjct: 274 LLHKLLDGENVDVRAQGRP---ENFLRNKKLFIVLDNVTEEKQIEYLIGKKNVYRQGSRI 330

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           V+ TRDK++L+K        Y V  L   EA E FC   F  ++  E+    S   V Y 
Sbjct: 331 VIITRDKKLLQK---NADATYVVPRLNDREAMELFCLQVFGNHYPTEEFVDLSNDFVCYA 387

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           KG PL L++LG  L     ++W K L  L    + E+      LK S+  L    KS+FL
Sbjct: 388 KGLPLALKLLGKGLLTHDINYWKKKLEFLQVNPDKELQKE---LKSSYKALDDDQKSVFL 444

Query: 240 DIACFFEGEDKDFVASILDDSESDVLDI---LIDKSLVSISGNFLNMHDILQEMGRQIVR 296
           DIACFF  E  DFV+SIL   + D  D+   L +K LV+IS + + MHD+L  MG++I +
Sbjct: 445 DIACFFRSEKADFVSSILKSDDIDAKDVMRELEEKCLVTISYDRIEMHDLLHAMGKEIGK 504

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
           ++S ++ G+R RLW+ K+I  +L+HN GT+ + GIFL++S+++ I L P AFT +S L+ 
Sbjct: 505 EKSIRKAGERRRLWNHKDIRDILEHNTGTECVRGIFLNMSEVRRIKLFPAAFTMLSKLKF 564

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
            KF+           S   +    +   ++P   D+ P +L YLHW  YP   LPS+F P
Sbjct: 565 LKFHSSH-------CSQWCDNDHIFQCSKVP---DHFPDELVYLHWQGYPYDCLPSDFDP 614

Query: 417 KNLVELNLRCSKVEQPWEGEK----------------------------------ACVP- 441
           K LV+L+LR S ++Q WE EK                                   C   
Sbjct: 615 KELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRAKNLERLDLEGCTSL 674

Query: 442 ---SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLY 498
               S++    L  L+ + C SL S P         T+  S C+ L +F  IS  +  L+
Sbjct: 675 DLLGSVKQMNELIYLNLRDCTSLESLPKGFKIKSLKTLILSGCLKLKDFHIISESIESLH 734

Query: 499 LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
           L  +AIE V   IE L  L +L+L+ C++LK +     KL+SL  L+L GC  LE  P I
Sbjct: 735 LEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLKSLQELVLSGCSALESLPPI 794

Query: 559 LEKMEHLKRIYSDRTPITELP 579
            EKME L+ +  D T I + P
Sbjct: 795 KEKMECLEILLMDGTSIKQTP 815



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 125/288 (43%), Gaps = 53/288 (18%)

Query: 682 SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE--LPLCLKYLHLIDCKMLQ 739
           +LE L L G     L   +KQM++L +++L D   L+SLP+      LK L L  C  L+
Sbjct: 662 NLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLPKGFKIKSLKTLILSGCLKLK 721

Query: 740 SLPVLPFCLESLDLTGCNMLRSLPELP--LCLQYLNLEDCNMLRSLPELPL---CLQLLT 794
              ++   +ESL L G  + R +  +     L  LNL++C  L+ LP        LQ L 
Sbjct: 722 DFHIISESIESLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLKSLQELV 781

Query: 795 VRNCNRLQSLPEILLCLQELDASVLEKLS-KHSPDLQWAPESLKSAAIC----------- 842
           +  C+ L+SLP I   ++ L+  +++  S K +P++     +LK  + C           
Sbjct: 782 LSGCSALESLPPIKEKMECLEILLMDGTSIKQTPEMS-CLSNLKICSFCRPVIDDSTGLY 840

Query: 843 ----------------------------FEFTNCLKLNGKANNKILADSLLRIRHMAIAS 874
                                       F FT+C KLN      I+A + L+ + +A  S
Sbjct: 841 LDAHGCGSLENVSKPLTIPLVTERMHTTFIFTDCFKLNQAEKEDIVAQAQLKSQLLARTS 900

Query: 875 LRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPH 922
               ++  + + L       +  PG +IP WFS+Q  GS I   L PH
Sbjct: 901 RHHNHKGLLLDPLVA-----VCFPGHDIPSWFSHQKMGSLIETDLLPH 943


>gi|356515308|ref|XP_003526343.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1464

 Score =  322 bits (824), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 243/733 (33%), Positives = 370/733 (50%), Gaps = 90/733 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK---LEVAGPN 76
           KTT+A+A+++  + +FE + F++D+R +S    GL  LQ+ +L  T+ +K   L      
Sbjct: 230 KTTIARALYNLIAGQFEATSFLTDIRESSNQRQGLVQLQETLLFDTVGDKNIKLGSIYKG 289

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           IP   K+R+   K+L++LDDV+++ QL+ L G  D FG GS I++TTRDK +L   + + 
Sbjct: 290 IP-IIKKRLCCKKVLLILDDVDKLEQLQALAGGRDWFGFGSVIIITTRDKHLLAAQQVD- 347

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
            K Y V  L  +EAF+ F   AFK           S  VV Y +G PL L+V+GS+L  K
Sbjct: 348 -KTYEVKKLNHDEAFDLFTWSAFKRKAPDAGYFDISNRVVLYAEGLPLALKVMGSNLFGK 406

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
               W   L    +I   E+ ++   L+++F+ L    K IFLDIACFF+GE  +++   
Sbjct: 407 TVEEWKSALGKYEKIPNKEVQNV---LRVTFDNLEENEKEIFLDIACFFKGETMEYIEKT 463

Query: 257 LDDS---ESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           L          + +L+D+SLVSI   + L MHD++Q+MGR+IVR+ S  EPGKRSRLW  
Sbjct: 464 LQACGLYPKFGISVLVDRSLVSIDKYDRLRMHDLIQDMGREIVREVSPLEPGKRSRLWYH 523

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
           +++  VL  N GT  I+G+ +DL     ++L   +F  M NL++       F+       
Sbjct: 524 EDVFEVLSENTGTYRIQGMMVDLPDQYTVHLKDESFKKMRNLKILIVRSGHFF------- 576

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSK--VE 430
                              +LP  LR L W  YP  +LPS+F+PK LV LNL  S+  ++
Sbjct: 577 ---------------GSPQHLPNNLRLLDWMEYPSSSLPSSFQPKKLVVLNLSHSRFTMQ 621

Query: 431 QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
           +P              FKYL +L+                    +++ ++C  L + P I
Sbjct: 622 EP--------------FKYLDSLT--------------------SMDLTHCELLTKLPDI 647

Query: 491 SG--KVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL 547
           +G   +T L+L   + +EEV  S+  L  L  L   GC +LK +  S  +L SL +LIL 
Sbjct: 648 TGVPNLTELHLDYCTNLEEVHDSVGFLEKLVELRAYGCTKLK-VFPSALRLASLRSLILN 706

Query: 548 GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
            C +L++FP IL KM++LK +  D T I ELP S  NL GL+ L +  C  L  LPDN  
Sbjct: 707 WCSSLQNFPAILGKMDNLKSVSIDSTGIRELPPSIGNLVGLQELSMTSCLSLKELPDNFD 766

Query: 608 SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD 667
            L+ L  +      I   P   +    LR +  S      +F     L L   GL+    
Sbjct: 767 MLQNLINL-----DIEGCPQLRSFLTKLRDMGQSTL----TFGNIQSLNLENCGLID--- 814

Query: 668 YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCL 727
               ++P        +  L LS N+F +LP  I++   L  +HL++   LQ +P  P  +
Sbjct: 815 ---EDLPIIFHCFPKVSSLVLSKNDFVALPICIQEFPCLELLHLDNCKKLQEIPGFPPNI 871

Query: 728 KYLHLIDCKMLQS 740
           +Y++  +C  L +
Sbjct: 872 QYVNARNCTSLTA 884



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 130/260 (50%), Gaps = 27/260 (10%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILA-AASAISQLPSSVALSN 633
           +T+LP     +P L  L ++ C+ L+ + D++G LE L  + A   + +   PS++ L++
Sbjct: 641 LTKLPD-ITGVPNLTELHLDYCTNLEEVHDSVGFLEKLVELRAYGCTKLKVFPSALRLAS 699

Query: 634 MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG--- 690
            LRSL  + C  L++FP   L  +  +  + I    +RE+P  I  L  L+ L ++    
Sbjct: 700 -LRSLILNWCSSLQNFP-AILGKMDNLKSVSIDSTGIRELPPSIGNLVGLQELSMTSCLS 757

Query: 691 -----NNFESLPAII----KQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML-QS 740
                +NF+ L  +I    +   QLR    +  +M QS       ++ L+L +C ++ + 
Sbjct: 758 LKELPDNFDMLQNLINLDIEGCPQLRSFLTKLRDMGQSTLTFG-NIQSLNLENCGLIDED 816

Query: 741 LPVLPFC---LESLDLTGCNMLRSLP----ELPLCLQYLNLEDCNMLRSLPELPLCLQLL 793
           LP++  C   + SL L+  N   +LP    E P CL+ L+L++C  L+ +P  P  +Q +
Sbjct: 817 LPIIFHCFPKVSSLVLSK-NDFVALPICIQEFP-CLELLHLDNCKKLQEIPGFPPNIQYV 874

Query: 794 TVRNCNRLQSLPEILLCLQE 813
             RNC  L +    LL  QE
Sbjct: 875 NARNCTSLTAESSNLLLSQE 894


>gi|147865361|emb|CAN84090.1| hypothetical protein VITISV_003077 [Vitis vinifera]
          Length = 1002

 Score =  322 bits (824), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 253/690 (36%), Positives = 362/690 (52%), Gaps = 83/690 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL---SEKLEVAGPN 76
           KTT+AKA+++  S++F+GS F+++VR  S+       LQ+++L   L   S K+      
Sbjct: 231 KTTIAKAVYNDISYQFDGSSFLNNVRERSKDNA--LQLQQELLHGILKGKSXKVSNMDEG 288

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           I    K  +   ++L+V DDV+++ Q++ L  E   FG  SRI++TTR K  L ++  +E
Sbjct: 289 I-QMIKRSLSSKRVLVVFDDVDDLMQIENLAEEHSWFGPRSRIIITTRHKHFLTQYGVKE 347

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
              Y V  L   EA E F  +AFK+N   E     S  VV Y KG PL L VLGS L  K
Sbjct: 348 S--YEVXXLHDAEAIELFSWWAFKQNLPNEIYKNLSYQVVDYAKGLPLALXVLGSFLFKK 405

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
             S W   L  L  I    I ++   LKIS++ L    K IFLDIACFF+G+DKDFV+ +
Sbjct: 406 TISEWESALCKLKTIPHMGIQNV---LKISYDGLDDVEKGIFLDIACFFKGKDKDFVSRM 462

Query: 257 LDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           LD+   +ES +  +L DK L+SISGN L+MHD+LQ+MG +IVRQE  KEPG+RSRLW+ +
Sbjct: 463 LDEDFYAESGI-GVLHDKCLISISGNKLDMHDLLQQMGWEIVRQECPKEPGRRSRLWEQE 521

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGI-NLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
           +I  VLK N G++ IEGIFLDLS ++ I +    AF  M  LRL K Y  K    +   +
Sbjct: 522 DIFDVLKRNMGSEKIEGIFLDLSHLEDILDFTTEAFAGMKKLRLLKVYNSKSILGDFGDT 581

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
            +   +++  +V+  +   +    LRYL+W  Y L++LP +F PK+LV+L++  S +++ 
Sbjct: 582 FTFNNKVN-CRVRFAHEFKFCSDDLRYLYWHGYSLKSLPKDFSPKHLVDLSMPYSHIKKL 640

Query: 433 WEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
           W                      KG + L+S  S         ++ S+   LIE P  SG
Sbjct: 641 W----------------------KGIKVLKSLKS---------MDLSHSKCLIETPDFSG 669

Query: 493 --KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
              + RL L G   + EV  S+  L  L  L L+ CK L+R+ +     +SL TLIL GC
Sbjct: 670 ITNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCKMLRRLPSRIWNFKSLRTLILSGC 729

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
              E FPE    +E LK ++ D T +  LP S  ++  L+ L    C           S 
Sbjct: 730 SKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRNLKKLSFRGCGP--------ASA 781

Query: 610 EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA 669
            +L+   ++ S    +PSS  L   L+ LD S C                    +ISD A
Sbjct: 782 SWLWXKRSSNSICFTVPSSSNLC-YLKKLDLSDC--------------------NISDGA 820

Query: 670 VREIPQEIAYLSSLEILYLSGNNFESLPAI 699
                  + +LSSLE L LSGNNF +LP +
Sbjct: 821 NL---GSLGFLSSLEDLNLSGNNFVTLPNM 847



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 130/520 (25%), Positives = 204/520 (39%), Gaps = 106/520 (20%)

Query: 550  LNLEHFPEILE---------KMEHLKRIYSDRTPITELPSSF--ENLPGLEVLFVED--- 595
            L+L H  +IL+         K   L ++Y+ ++ + +   +F   N     V F  +   
Sbjct: 541  LDLSHLEDILDFTTEAFAGMKKLRLLKVYNSKSILGDFGDTFTFNNKVNCRVRFAHEFKF 600

Query: 596  CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR-SLDSSHCKGLESFPRTFL 654
            CS           L YLY+      ++  LP   +  +++  S+  SH K L    +  L
Sbjct: 601  CSD---------DLRYLYW---HGYSLKSLPKDFSPKHLVDLSMPYSHIKKLWKGIKV-L 647

Query: 655  LGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDF 714
              L +M L H     + E P + + +++LE L L G    +LP +   +  L+       
Sbjct: 648  KSLKSMDLSH--SKCLIETP-DFSGITNLERLVLEG--CINLPEVHPSLGDLK------- 695

Query: 715  NMLQSLPELPLCLKYLHLIDCKMLQSLP--VLPF-CLESLDLTGCNMLRSLPELPLCLQY 771
                        L +L L DCKML+ LP  +  F  L +L L+GC+     PE       
Sbjct: 696  -----------KLNFLSLKDCKMLRRLPSRIWNFKSLRTLILSGCSKFEEFPE------- 737

Query: 772  LNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQW 831
             N  +  ML+ L E           +   +++LP     ++ L           S    W
Sbjct: 738  -NFGNLEMLKELHE-----------DGTVVRALPPSNFSMRNLKKLSFRGCGPASASWLW 785

Query: 832  APESLKSAAICF--------------EFTNCLKLNGKANNKILADSLLRIRHMAIASLRL 877
               S  S +ICF              + ++C   +G     +   S L   +++  +   
Sbjct: 786  XKRS--SNSICFTVPSSSNLCYLKKLDLSDCNISDGANLGSLGFLSSLEDLNLSGNNFVT 843

Query: 878  GYEMAINEKLSELRGSL-IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAV 936
               M+    LS L   +  V+PGS IPDW   QSS + I   LP + S  N +GFA   V
Sbjct: 844  LPNMS---GLSHLDSDVAFVIPGSRIPDWIRYQSSENVIEADLPLNWST-NCLGFALALV 899

Query: 937  LDSKKVDSDCFRYFYVSFQFDLEIKTLS-ETK---HVDLGYNSRYIEDLIDSDRVILGFK 992
              S+   S    + +     D      S ET+   H++ G N     ++   D V+L + 
Sbjct: 900  FSSQPPVS---HWLWAEVFLDFGTCCCSIETQCFFHLE-GDNCVLAHEV---DHVLLXYV 952

Query: 993  PCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGLCPVYAN 1032
            P      P    H  ATF   +E   Y+IKRCGL  VY N
Sbjct: 953  PVQPSLSPHQVIHIKATFAITSETG-YEIKRCGLGLVYVN 991


>gi|296086817|emb|CBI32966.3| unnamed protein product [Vitis vinifera]
          Length = 1313

 Score =  322 bits (824), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 308/1054 (29%), Positives = 470/1054 (44%), Gaps = 156/1054 (14%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
            KTT+AK I+++ S EFE   F+ ++RG S T G L HLQ Q+L   + E+      NI  
Sbjct: 128  KTTIAKFIYNKLSCEFEYMSFLENIRGISNTKG-LTHLQNQLLGD-IREEERSQNINIVD 185

Query: 80   FTKERVRRM----KLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGE 135
                 +  +     + IVLDDV+   QLK L+      G+GSR+++TTR+K +L     E
Sbjct: 186  QGASMIETILSSKSVFIVLDDVDNRNQLKALLRHRGWLGKGSRVIITTRNKHLL--IEQE 243

Query: 136  EKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
               +Y V GL  EEA E F   AFK+N    D    S  +V Y +G PL LEVLGS L  
Sbjct: 244  VDDLYEVKGLNTEEACELFSLHAFKQNLPKSDFINLSYRMVYYCQGLPLALEVLGSLLFN 303

Query: 196  KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
                 W   LH L +   +EIH++   LK S++ L    K I LD+ACF +GE +D V  
Sbjct: 304  MTIPQWESQLHKLAKEPMAEIHNV---LKSSYDGLDRTEKDILLDVACFLKGEKRDSVLR 360

Query: 256  ILDDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
            ILD      +  L DK L+++  N  ++MHD++Q+M  +IVR+   KEP K SRLWD  +
Sbjct: 361  ILDACAGIGIQNLKDKCLITLPYNHKIDMHDLIQQMCWEIVRENFPKEPNKWSRLWDSHD 420

Query: 315  ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
            I R L  ++G   +E I LDLSK+K ++ +   F+ M++LRL + +      +     M 
Sbjct: 421  IERALTTSEGIKGVETIDLDLSKLKRVHFNSNVFSKMTSLRLLRVHSYVNIFLGCYDEMK 480

Query: 375  TEEQLS--YSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
             EE++   Y K+     +D   K                S F   + ++ N+RC     P
Sbjct: 481  EEEEVDPYYEKI-----IDSAKKTASKC-----------SRFGKFSEIQGNMRC-----P 519

Query: 433  WEGEKACV-----PSSIQNFKYLSALS---------FKGCQ--------------SLRSF 464
            WE     +     P+SI+N +    L          F G Q              +++  
Sbjct: 520  WEPYLKEIAIKEHPTSIENSRSFWDLDPCGHSNLEKFPGIQGNMRSLRLLYLSKTAIKEL 579

Query: 465  PSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLY---LGQSAIEEVPSSIECLTDLEVLD 521
            P ++      +++ SYC    +FP+    +  L    L  +AI+E+P  I     L  LD
Sbjct: 580  PGSIDLESVESLDLSYCSKFKKFPENGANMKSLRELDLTHTAIKELPIGISNWESLRTLD 639

Query: 522  LRGCKRLKRIST-----------------------SFCKLRSLVTLILLGCLNLEHFPEI 558
            L  C + ++                          S   L+SL  L +  C   E+FPE 
Sbjct: 640  LSKCSKFEKFPAIQGNMRNLKELLLNNTAIKCFPDSIGYLKSLEILNVSDCSKFENFPEK 699

Query: 559  LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
               M++LK++    TPI +LP     L  LE+L + DCSK +  P+  G+++ L  +   
Sbjct: 700  GGNMKNLKQLLLKNTPIKDLPDGIGELESLEILDLSDCSKFEKFPEKGGNMKSLGMLYLT 759

Query: 619  ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIA 678
             +AI  LP+S+     L  LD S+C   E FP      + ++G+L++++ A++++P  I 
Sbjct: 760  NTAIKDLPNSIGSLESLVELDLSNCSKFEKFPEKG-GNMKSLGMLYLTNTAIKDLPDSIG 818

Query: 679  YLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHL---------EDFNMLQSLPELPL--C 726
             L SL  L LS  + FE  P     M  L  + L         +    L+SL EL L  C
Sbjct: 819  SLESLVELDLSNCSKFEKFPEKGGNMKSLVVLRLMNTAIKDLPDSIGSLESLVELDLSNC 878

Query: 727  LKY---------------LHLIDCKMLQSLP--VLPFCLESLDLTGCNMLRSLPELPLCL 769
             K+               L+L +   ++ LP  +    L  LDL+ C+     PEL   +
Sbjct: 879  SKFEKFPEKGGNMKRLGVLYLTNT-AIKDLPDSIGSLDLVDLDLSNCSQFEKFPELKRSM 937

Query: 770  QYLNLEDCNMLRS-LPELPLC------LQLLTVRNCNRLQSLPEILLCLQELDASVLEKL 822
              L L   N+ R+ + ELP        L  L +  C  L+SLP+ +  L+ L++ +L   
Sbjct: 938  --LELRTLNLRRTAIKELPSSIDNVSGLWDLDISECKNLRSLPDDISRLEFLESLILGGC 995

Query: 823  SKHSPDLQWAPESLKSAAICFEFTNCLKLNG---KANNKILA--DSLLRIRHMAIAS--- 874
            S           +L    I  +  N  KLN    K   K L    SL RI      S   
Sbjct: 996  S-----------NLWEGLISNQLRNLGKLNTSQWKMAEKTLELPSSLERIDAHHCTSKED 1044

Query: 875  -------LRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPH-SSCR 926
                     L +  +  E+L   + S ++   S IP+W    + GS +  +LP +     
Sbjct: 1045 LSSLLWLCHLNWLKSATEELKCWKLSAVIPESSGIPEWIRYDNLGSELTTELPTNWYEDP 1104

Query: 927  NLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEI 960
            +L+GF    V        D    ++ S  F  E+
Sbjct: 1105 DLLGFVVSCVYQPIPTSHDPRISYHFSSAFSCEL 1138


>gi|124359513|gb|ABN05946.1| TIR [Medicago truncatula]
          Length = 1230

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 229/672 (34%), Positives = 351/672 (52%), Gaps = 87/672 (12%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           + S+ V+ +G+WGMGGIGKT LAK+++  +  +FE  CF+ +VR  S T  GL  ++K++
Sbjct: 317 NGSNDVRTLGLWGMGGIGKTALAKSLYGNYCSQFEYHCFLENVREES-TRCGLNVVRKKL 375

Query: 62  LSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRL-IGELDQFGQGSRIV 120
            ST L   L+      P F K+R+ R K LIVLDDV  + Q + L IG     G GSR++
Sbjct: 376 FSTLLKLGLDAPYFETPTF-KKRLERAKCLIVLDDVATLEQAENLKIG----LGLGSRVI 430

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           VTTRD+++  +F G    +Y V  L  +E+ + FC  AF+E H  E     S+S + Y +
Sbjct: 431 VTTRDRKICHQFEG--FVVYEVKELNEDESLQLFCCNAFQEKHAKEGYEELSKSAIGYCR 488

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           GNPL L+VLG++   K K      L  +  I  + IHD+   LK+SF  L    + IFLD
Sbjct: 489 GNPLALKVLGANFRAKSKEACESELEKIKEIPYAGIHDV---LKLSFYDLDRTQRDIFLD 545

Query: 241 IACFFEGE--------DKDFVASILDDSE---SDVLDILIDKSLVSIS-GNFLNMHDILQ 288
           IACFF  +         ++++  + +  +   +  +++L+ KSL++    + + MHD++ 
Sbjct: 546 IACFFYPKINHFYCYGRREYIIDLFNACKFYPATSIEVLLHKSLMTFGYRDQIEMHDLVV 605

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
           EMGR+IV+QE+ K+PGKRSRLWDP+ I  V K+NKGTDA+E I  D SKI  + L  R+F
Sbjct: 606 EMGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKGTDAVEVILFDTSKIGDVYLSSRSF 665

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
            +M NLRL                ++ E     + V L  GL++L  KLRYLHW+++PL 
Sbjct: 666 ESMINLRLLH--------------IANE----CNNVHLQEGLEWLSDKLRYLHWESFPLE 707

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKAC----------------VP--SSIQNFKYL 450
           +LPS F  +NLV+L++  SK+ + W+  +                  +P  S   N K L
Sbjct: 708 SLPSTFCAQNLVQLSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKIL 767

Query: 451 S---------------------ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
           S                      L  KGC+ + S  +++H      ++ + C +L++F  
Sbjct: 768 SLAYCVSLHQLHPSIFSAPKLRELCLKGCKKIESLVTDIHSKSLQRLDLTDCSSLVQFCV 827

Query: 490 ISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL-- 547
            S ++  L L  + I E  S +   + L+ LDL  CK+L  +       R L +L +L  
Sbjct: 828 TSEEMKWLSLRGTTIHEFSSLMLRNSKLDYLDLGDCKKLNFVGKKLSNDRGLESLSILNL 887

Query: 548 -GC--LNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLP 603
            GC  +N      IL+    LK +   +   +  LP + +N   L  L ++ C  L++LP
Sbjct: 888 SGCTQINTLSMSFILDSARFLKYLNLRNCCNLETLPDNIQNCLMLRSLHLDGCINLNSLP 947

Query: 604 DNIGSLEYLYYI 615
               SLE L  I
Sbjct: 948 KLPASLEELSAI 959



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 156/370 (42%), Gaps = 65/370 (17%)

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
           E P+  GK +RL+     I EV    +    +EV+ L    ++  +  S     S++ L 
Sbjct: 615 EAPKDPGKRSRLW-DPELIYEVFKYNKGTDAVEVI-LFDTSKIGDVYLSSRSFESMINLR 672

Query: 546 LLG----CLNLEHFPEILEKM-EHLKRIYSDRTPITELPSSF--ENLPGLEVLFVEDCSK 598
           LL     C N+ H  E LE + + L+ ++ +  P+  LPS+F  +NL  L +      SK
Sbjct: 673 LLHIANECNNV-HLQEGLEWLSDKLRYLHWESFPLESLPSTFCAQNLVQLSMTH----SK 727

Query: 599 LDNLPDNIGSLEYLYYI------------------------LAAASAISQLPSSVALSNM 634
           L  L D I  L+ L  I                        LA   ++ QL  S+  +  
Sbjct: 728 LRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKILSLAYCVSLHQLHPSIFSAPK 787

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFE 694
           LR L    CK +ES     +  + +  L  +       + Q       ++ L L G    
Sbjct: 788 LRELCLKGCKKIESL----VTDIHSKSLQRLDLTDCSSLVQFCVTSEEMKWLSLRGTTIH 843

Query: 695 SLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLT 754
              +++ + S+L ++ L D   L  + +         L + + L+SL +L       +L+
Sbjct: 844 EFSSLMLRNSKLDYLDLGDCKKLNFVGK--------KLSNDRGLESLSIL-------NLS 888

Query: 755 GCNMLRSLP-----ELPLCLQYLNLEDCNMLRSLPE-LPLCLQL--LTVRNCNRLQSLPE 806
           GC  + +L      +    L+YLNL +C  L +LP+ +  CL L  L +  C  L SLP+
Sbjct: 889 GCTQINTLSMSFILDSARFLKYLNLRNCCNLETLPDNIQNCLMLRSLHLDGCINLNSLPK 948

Query: 807 ILLCLQELDA 816
           +   L+EL A
Sbjct: 949 LPASLEELSA 958


>gi|399920215|gb|AFP55562.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1083

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 255/781 (32%), Positives = 379/781 (48%), Gaps = 142/781 (18%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++ ++ V+ +GIWGMGG+GKTTLA+ ++++ SH F+   F++++R  S T G L +LQKQ
Sbjct: 160 VEEANDVRFIGIWGMGGLGKTTLARVVYEEISHRFDVCVFLANIREVSATHG-LVYLQKQ 218

Query: 61  MLSTTLSE---KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +LS  L E   K+      I   TK  +    +L+VLDDV++  QL+ L+GE D FG  S
Sbjct: 219 ILSQILKEENVKVWDVYSGIT-MTKRCLCNKAVLLVLDDVDQSEQLEHLVGEKDWFGLRS 277

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI++TTR++RVL    G EK  Y + GL  +EA + F   AF++    ED     +S V+
Sbjct: 278 RIIITTRNQRVLVT-HGVEKP-YELKGLNKDEALQLFSWKAFRKCEPEEDYAELCKSFVT 335

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y  G PL L+ LGS L  +    W   L  L    ++    +++ILK+SF+ L    K I
Sbjct: 336 YAGGLPLALKTLGSFLYKRSLHSWSSALQKLQ---QTPNRSVFEILKLSFDGLDEMEKKI 392

Query: 238 FLDIACF---FEGEDKDFVASILDDSESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQ 293
           FLDIACF   ++ E         D     ++D+L++KSL++IS  N + +HD++ EMG +
Sbjct: 393 FLDIACFRRLYDNESMIEQVHSFDFCPRIIIDVLVEKSLLTISSDNRVGVHDLIHEMGCE 452

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IVRQE+ KEPG RSRL    +I  V  +N GT+AIEGI L L++++  + +  AF+ M  
Sbjct: 453 IVRQEN-KEPGGRSRLCLHNDIFHVFTNNTGTEAIEGILLHLAELEEADWNLEAFSKMCK 511

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           L+L   +                       ++L  G  YLP  LR+L+W  YP ++LP  
Sbjct: 512 LKLLYIH----------------------NLRLSLGPIYLPNALRFLNWSWYPSKSLPPC 549

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           F+   L EL+L  S ++  W G                    K  ++L+S          
Sbjct: 550 FQSDKLTELSLVHSNIDHLWNG-------------------IKYSRNLKS---------- 580

Query: 474 VTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
             I+ SY +NL   P  +G                     + +LE L L GC  L  +  
Sbjct: 581 --IDLSYSINLTRTPDFTG---------------------IPNLEKLVLEGCTNLVEVHQ 617

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
           S   L+ L  L L  C +++  P                   +E+   F     LE   V
Sbjct: 618 STGLLQKLRILNLRNCKSIKSLP-------------------SEVHMEF-----LETFDV 653

Query: 594 EDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES----- 648
             CSKL  +P+ +G ++ L  +  + +A+ +LPS   LS  L  LD S     E      
Sbjct: 654 SGCSKLKMIPEFVGQMKRLSRLSLSGTAVEKLPSIEHLSESLVELDLSGIVIREQPYSLF 713

Query: 649 ------------FPR----------TFLLGLSAMGLLHISDYAV--REIPQEIAYLSSLE 684
                       FPR            L   S++  L ++D  +   E+P +I  LSSLE
Sbjct: 714 LKQNLIVSSFGLFPRKSPHPLIPLLASLKHFSSLTTLKLNDCNLCEGELPNDIGSLSSLE 773

Query: 685 ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
            LYL GNNF +LPA I  +S+LR+I++E+   LQ LPEL          +C  LQ  P  
Sbjct: 774 WLYLGGNNFSTLPASIHLLSKLRYINVENCKRLQQLPELSANDVLSRTDNCTSLQLFPDP 833

Query: 745 P 745
           P
Sbjct: 834 P 834



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 193/457 (42%), Gaps = 78/457 (17%)

Query: 491 SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
           S K+T L L  S I+ + + I+   +L+ +DL     L R +  F  + +L  L+L GC 
Sbjct: 552 SDKLTELSLVHSNIDHLWNGIKYSRNLKSIDLSYSINLTR-TPDFTGIPNLEKLVLEGCT 610

Query: 551 NLEHFPEILEKMEHLKRIYSDRT--PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGS 608
           NL    +    ++ L RI + R    I  LPS   ++  LE   V  CSKL  +P+ +G 
Sbjct: 611 NLVEVHQSTGLLQKL-RILNLRNCKSIKSLPSEV-HMEFLETFDVSGCSKLKMIPEFVGQ 668

Query: 609 LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL---LGLSAMGLLHI 665
           ++ L  +  + +A+ +LPS   LS  L  LD S     E     FL   L +S+ GL   
Sbjct: 669 MKRLSRLSLSGTAVEKLPSIEHLSESLVELDLSGIVIREQPYSLFLKQNLIVSSFGLF-- 726

Query: 666 SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
                R+ P  +                  L A +K  S L  + L D N+ +   ELP 
Sbjct: 727 ----PRKSPHPLI----------------PLLASLKHFSSLTTLKLNDCNLCEG--ELP- 763

Query: 726 CLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLP---ELPLCLQYLNLEDCNMLRS 782
                   D   L SL  L          G N   +LP    L   L+Y+N+E+C  L+ 
Sbjct: 764 -------NDIGSLSSLEWLYL--------GGNNFSTLPASIHLLSKLRYINVENCKRLQQ 808

Query: 783 LPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC 842
           LPEL     L    NC  LQ  P+                    PDL        + +  
Sbjct: 809 LPELSANDVLSRTDNCTSLQLFPD-------------------PPDL-----CRITTSFW 844

Query: 843 FEFTNCLKLNGKANNKILADSLLRIRHMAIASL-RLGYEMAINEKLSELRGSL-IVLPGS 900
               NCL + G  +      S+L+ R + I  L R    + + E       SL +V+PGS
Sbjct: 845 LNCVNCLSMVGNQDASYFLYSVLK-RWIEIQVLTRCDMTVHMQETHRRPLESLKVVIPGS 903

Query: 901 EIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
           EIP+WF+NQS G  +  +LP       LIGFA CA++
Sbjct: 904 EIPEWFNNQSVGDRVTEKLPSDECYSKLIGFAVCALI 940


>gi|357499823|ref|XP_003620200.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355495215|gb|AES76418.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1437

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 248/731 (33%), Positives = 361/731 (49%), Gaps = 89/731 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE--KLEVAGPNI 77
           KTTLA+A+++  S +F+ S FV DVR NS    GL HLQ+ +L   L E  KL+     I
Sbjct: 258 KTTLARAVYNSMSRKFDSSSFVVDVRENS-MKHGLVHLQETLLLHLLFENIKLDDVSKGI 316

Query: 78  PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
           P   K R+R  K+L++LDDV+ + QL+ L+G  D FG GS+I++TTRDK +L       K
Sbjct: 317 P-IIKRRLRNKKVLLILDDVDNLQQLRSLVGRRDWFGFGSKIIITTRDKHLLAAHGV--K 373

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           K+Y V  L   E+ E F   AF++N          + VV Y KG+PL L V+GS L  K 
Sbjct: 374 KLYEVKELNDHESLELFSMNAFRKNVPDASYGEIVKCVVQYAKGHPLALNVIGSDLFGKT 433

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W   L+    I   EI    ++LK+S++ L    K IFLDIACFF+G  K  V   L
Sbjct: 434 VEEWKSALNKYETIPNKEI---LNVLKVSYDNLDDNEKEIFLDIACFFKGYPKADVEKTL 490

Query: 258 DDSE---SDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           D S       + +L+DKSLV+IS  N + MHD+++++G+ I R+ES  +P KR RLW  +
Sbjct: 491 DASRFYSKYGIGVLVDKSLVTISESNSVKMHDLIEDLGKDIARKESPFDPSKRRRLWHHE 550

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
           ++  VL  N GTD IEGI LD+  +K  + L    F +M  LR+                
Sbjct: 551 DVLEVLTENMGTDTIEGIVLDMPNLKQEVQLKANTFDDMKRLRIL--------------- 595

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
           +    Q+S +   LPN        LR L W+ YPL +LP +F PK LV LNL  S +   
Sbjct: 596 IVRNGQVSGAPQNLPNN-------LRLLEWNKYPLTSLPDSFHPKTLVVLNLPKSHI--- 645

Query: 433 WEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
                  +    + F++L+ ++F  C SL   P          I  + C NL+       
Sbjct: 646 ------TMDEPFKKFEHLTFMNFSDCDSLTKLPDVSATPNLTRILVNNCENLV------- 692

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
                        ++  SI  L  L  L   GC  LK       + + L  L L  C ++
Sbjct: 693 -------------DIHESIGDLDKLVTLSTEGCPNLKSFPRGL-RSKYLEYLNLRKCSSI 738

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           ++FP++L K+E++K I    T I + PSS EN  GLE L +  CS +++LP N    + +
Sbjct: 739 DNFPDVLAKVENMKNIDIGGTAIKKFPSSIENFKGLEELVLTSCSNVEDLPSNTDMFQNI 798

Query: 613 YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGL--LHISDYAV 670
             +        QLP  +              K LE+    +L  LS + L   ++SD  +
Sbjct: 799 DEL--NVEGCPQLPKLL-------------WKSLENRTTDWLPKLSNLSLKNCNLSDEDL 843

Query: 671 REIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
             I   +     L+ L LS NNF ++P  IK +S L  +++E+   L+ +  LP    YL
Sbjct: 844 ELI---LKCFLQLKWLILSDNNFLTIPVCIKDLSHLLLLNIENCKHLRDISVLP---PYL 897

Query: 731 HLIDCKMLQSL 741
             ID +M  +L
Sbjct: 898 QYIDARMCMAL 908



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 151/372 (40%), Gaps = 84/372 (22%)

Query: 557 EILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
           E  +K EHL  + +SD   +T+LP      P L  + V +C  L ++ ++IG L+ L  +
Sbjct: 649 EPFKKFEHLTFMNFSDCDSLTKLPD-VSATPNLTRILVNNCENLVDIHESIGDLDKLVTL 707

Query: 616 -LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP 674
                  +   P  +  S  L  L+   C  +++FP   L  +  M  + I   A+++ P
Sbjct: 708 STEGCPNLKSFPRGLR-SKYLEYLNLRKCSSIDNFPDV-LAKVENMKNIDIGGTAIKKFP 765

Query: 675 QEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI 733
             I     LE L L+  +N E LP+         F ++++ N ++  P+LP  L     +
Sbjct: 766 SSIENFKGLEELVLTSCSNVEDLPSNTDM-----FQNIDELN-VEGCPQLPKLL--WKSL 817

Query: 734 DCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPL-C---LQYLNLEDCNMLRSLPELPLC 789
           + +    LP L     +L L  CN+     EL L C   L++L L D N L     +P+C
Sbjct: 818 ENRTTDWLPKLS----NLSLKNCNLSDEDLELILKCFLQLKWLILSDNNFLT----IPVC 869

Query: 790 LQ------LLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICF 843
           ++      LL + NC  L+ +  +   LQ +DA +   L+ HS                 
Sbjct: 870 IKDLSHLLLLNIENCKHLRDISVLPPYLQYIDARMCMALTPHSS---------------- 913

Query: 844 EFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIP 903
                                               E+ +++   E+    IV+P ++IP
Sbjct: 914 ------------------------------------EVLLSQAFQEVEYIDIVVPRTKIP 937

Query: 904 DWFSNQSSGSSI 915
            WF + + G SI
Sbjct: 938 SWFDHCNKGESI 949


>gi|357449525|ref|XP_003595039.1| TMV resistance protein N [Medicago truncatula]
 gi|355484087|gb|AES65290.1| TMV resistance protein N [Medicago truncatula]
          Length = 1128

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 229/672 (34%), Positives = 351/672 (52%), Gaps = 87/672 (12%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           + S+ V+ +G+WGMGGIGKT LAK+++  +  +FE  CF+ +VR  S T  GL  ++K++
Sbjct: 215 NGSNDVRTLGLWGMGGIGKTALAKSLYGNYCSQFEYHCFLENVREES-TRCGLNVVRKKL 273

Query: 62  LSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRL-IGELDQFGQGSRIV 120
            ST L   L+      P F K+R+ R K LIVLDDV  + Q + L IG     G GSR++
Sbjct: 274 FSTLLKLGLDAPYFETPTF-KKRLERAKCLIVLDDVATLEQAENLKIG----LGLGSRVI 328

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           VTTRD+++  +F G    +Y V  L  +E+ + FC  AF+E H  E     S+S + Y +
Sbjct: 329 VTTRDRKICHQFEG--FVVYEVKELNEDESLQLFCCNAFQEKHAKEGYEELSKSAIGYCR 386

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           GNPL L+VLG++   K K      L  +  I  + IHD+   LK+SF  L    + IFLD
Sbjct: 387 GNPLALKVLGANFRAKSKEACESELEKIKEIPYAGIHDV---LKLSFYDLDRTQRDIFLD 443

Query: 241 IACFFEGE--------DKDFVASILDDSE---SDVLDILIDKSLVSIS-GNFLNMHDILQ 288
           IACFF  +         ++++  + +  +   +  +++L+ KSL++    + + MHD++ 
Sbjct: 444 IACFFYPKINHFYCYGRREYIIDLFNACKFYPATSIEVLLHKSLMTFGYRDQIEMHDLVV 503

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
           EMGR+IV+QE+ K+PGKRSRLWDP+ I  V K+NKGTDA+E I  D SKI  + L  R+F
Sbjct: 504 EMGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKGTDAVEVILFDTSKIGDVYLSSRSF 563

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
            +M NLRL                ++ E     + V L  GL++L  KLRYLHW+++PL 
Sbjct: 564 ESMINLRLLH--------------IANE----CNNVHLQEGLEWLSDKLRYLHWESFPLE 605

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKAC----------------VP--SSIQNFKYL 450
           +LPS F  +NLV+L++  SK+ + W+  +                  +P  S   N K L
Sbjct: 606 SLPSTFCAQNLVQLSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKIL 665

Query: 451 S---------------------ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
           S                      L  KGC+ + S  +++H      ++ + C +L++F  
Sbjct: 666 SLAYCVSLHQLHPSIFSAPKLRELCLKGCKKIESLVTDIHSKSLQRLDLTDCSSLVQFCV 725

Query: 490 ISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL-- 547
            S ++  L L  + I E  S +   + L+ LDL  CK+L  +       R L +L +L  
Sbjct: 726 TSEEMKWLSLRGTTIHEFSSLMLRNSKLDYLDLGDCKKLNFVGKKLSNDRGLESLSILNL 785

Query: 548 -GC--LNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLP 603
            GC  +N      IL+    LK +   +   +  LP + +N   L  L ++ C  L++LP
Sbjct: 786 SGCTQINTLSMSFILDSARFLKYLNLRNCCNLETLPDNIQNCLMLRSLHLDGCINLNSLP 845

Query: 604 DNIGSLEYLYYI 615
               SLE L  I
Sbjct: 846 KLPASLEELSAI 857



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 156/370 (42%), Gaps = 65/370 (17%)

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
           E P+  GK +RL+     I EV    +    +EV+ L    ++  +  S     S++ L 
Sbjct: 513 EAPKDPGKRSRLW-DPELIYEVFKYNKGTDAVEVI-LFDTSKIGDVYLSSRSFESMINLR 570

Query: 546 LLG----CLNLEHFPEILEKM-EHLKRIYSDRTPITELPSSF--ENLPGLEVLFVEDCSK 598
           LL     C N+ H  E LE + + L+ ++ +  P+  LPS+F  +NL  L +      SK
Sbjct: 571 LLHIANECNNV-HLQEGLEWLSDKLRYLHWESFPLESLPSTFCAQNLVQLSMTH----SK 625

Query: 599 LDNLPDNIGSLEYLYYI------------------------LAAASAISQLPSSVALSNM 634
           L  L D I  L+ L  I                        LA   ++ QL  S+  +  
Sbjct: 626 LRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKILSLAYCVSLHQLHPSIFSAPK 685

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFE 694
           LR L    CK +ES     +  + +  L  +       + Q       ++ L L G    
Sbjct: 686 LRELCLKGCKKIESL----VTDIHSKSLQRLDLTDCSSLVQFCVTSEEMKWLSLRGTTIH 741

Query: 695 SLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLT 754
              +++ + S+L ++ L D   L  + +         L + + L+SL +L       +L+
Sbjct: 742 EFSSLMLRNSKLDYLDLGDCKKLNFVGK--------KLSNDRGLESLSIL-------NLS 786

Query: 755 GCNMLRSLP-----ELPLCLQYLNLEDCNMLRSLPE-LPLCLQL--LTVRNCNRLQSLPE 806
           GC  + +L      +    L+YLNL +C  L +LP+ +  CL L  L +  C  L SLP+
Sbjct: 787 GCTQINTLSMSFILDSARFLKYLNLRNCCNLETLPDNIQNCLMLRSLHLDGCINLNSLPK 846

Query: 807 ILLCLQELDA 816
           +   L+EL A
Sbjct: 847 LPASLEELSA 856


>gi|42569093|ref|NP_179297.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251486|gb|AEC06580.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1355

 Score =  321 bits (822), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 309/1029 (30%), Positives = 460/1029 (44%), Gaps = 192/1029 (18%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ +GIWGM GIGKTTLA+A FDQFS ++E SC + D       A GL HL  + L   +
Sbjct: 46  IRSIGIWGMPGIGKTTLAEAAFDQFSGDYEASCIIKDF-DKEFLAKGLYHLWNEYLGENI 104

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
           +     +G            + +LLIVLD+V +       +   D FG GS I++T+RDK
Sbjct: 105 NNSFIKSG------------QKRLLIVLDNVLKPLDADAFLNGFDWFGPGSLIIITSRDK 152

Query: 127 RVLEKFRGEEKKIYRVNGLEFEEAFE--HFCNFA--FKENHCPEDLNWHSRSVVSYTKGN 182
           +VL   +    +IY V GL  +EA +  H C F   +++    E L  +  SV  Y  GN
Sbjct: 153 QVL--VQCGVNQIYEVEGLNKDEAKQLLHGCAFGIDWRKQSGLETLAPYYISV-KYFSGN 209

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L +    L   +       L  LN         I ++ K ++N L    KS+FLDIA
Sbjct: 210 PLALSLYEEMLSHMKSDKMEVKLLKLNHPPPQ----IMEVFKSNYNALNENEKSMFLDIA 265

Query: 243 CFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
           CFF GE  D+V  + +         + +L+DK LV+I    + MH+++Q +G+ I   E 
Sbjct: 266 CFFRGEKADYVMQLFEGCGFFPHVGIYVLVDKCLVTIVKRKMEMHNLIQIVGKAI-SNEG 324

Query: 300 EKEPGKRSRLWDPKEISRVLK--------HNKGT-DAIEGIFLDLSKIKGINLDPRAFTN 350
             E  +  RLWD   I  +L+         +KGT + IE IFLD+S +K   + P AF +
Sbjct: 325 TVELDRHVRLWDTSIIQPLLEDEETKLKGESKGTTEDIEVIFLDMSNLKFF-VKPDAFKS 383

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M NLR  K Y              +     + +++    L  LP +LR LHW+ YPL++L
Sbjct: 384 MHNLRFLKIY--------------SSNPGKHQRIRFREALQSLPNELRLLHWEDYPLQSL 429

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGE------KACVPSSIQNF---------KYLSALSF 455
           P +F P +LVELN+  SK+++ W G       K    S  Q+          K +  +  
Sbjct: 430 PQHFDPTHLVELNMPYSKLQKLWGGTKNLEMLKMVRLSHSQDLVEIEELIKSKNIEVIDL 489

Query: 456 KGCQSLRSFPSNLHFVCPVTINFSYCV-----NLIEFPQISGKVTRLYLGQSAIEEVPSS 510
           +GC  ++SFP+  H      IN S CV      L EF      +  LYL  + I EV SS
Sbjct: 490 QGCTKIQSFPATRHLQHLRVINLSGCVEIKSTQLEEFQGFPRNLKELYLSGTGIREVTSS 549

Query: 511 IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYS 570
           I  L+ LEVLDL  CKRL+ +      L SL+ L+L GC  L++  ++     +LK +Y 
Sbjct: 550 IH-LSSLEVLDLSNCKRLQNLPMGKGNLASLIKLMLSGCSKLQNIQDL---PTNLKELYL 605

Query: 571 DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL--------------------- 609
             T I E+PSS  +L  L V   E+C KL +LP  +G+L                     
Sbjct: 606 AGTSIREVPSSICHLTQLVVFDAENCKKLQDLPMGMGNLISLTMLILSGCSELRSIPDLP 665

Query: 610 EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL-----ESFPRTFLLGLSA-MGLL 663
             L ++  A + I +LPSS      L SLD +HC+ L     ESF     + LS  + L 
Sbjct: 666 RNLRHLNLAETPIKKLPSSFEDLTKLVSLDLNHCERLQHLQMESFESVVRVDLSGCLELK 725

Query: 664 HISDYAVREIPQ--------------------------EIAYLSSLE----ILYLSGNNF 693
           +I  +++++I Q                             +++ +E      YL    F
Sbjct: 726 YILGFSLQDITQLHEDGTDKVMLHGTPPCNVTLILETWRTRHVTPMEKSGSKFYLKLMPF 785

Query: 694 ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDL 753
            + P   K  S L F         +    + L L   +L+D  + Q +  L   L++LDL
Sbjct: 786 VTTPYRSKLQSSLVF---------RMYAMVSLFLSKAYLLDIHIPQEICNL-LSLKTLDL 835

Query: 754 TGCNMLRSLPELPLCLQYLNLED-----CNMLRSLPELPLCLQLLTVRNCNRLQSLPEIL 808
           +G N  + LPE     Q+ NLE      C  L SLPELP  L+ L    C          
Sbjct: 836 SGNNFGK-LPE--SIKQFRNLESLILCHCKNLESLPELPQSLEFLNAHGC---------- 882

Query: 809 LCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIR 868
           +CL+ +  S  ++  +H                   F+NC +++     +IL     R+ 
Sbjct: 883 VCLKNIHRS-FQQFPRHCT-----------------FSNCFEISPDIVREILE---ARVA 921

Query: 869 HMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNL 928
            M I            +KL E       +P    P++  + + GSS+ I+L P  S   L
Sbjct: 922 QMVIDHTL--------QKLIEAPAFSFSVPAFRDPNYIFHLNRGSSVMIRLTP--SIETL 971

Query: 929 IGFAFCAVL 937
           +GF     +
Sbjct: 972 LGFQISVAV 980


>gi|12597786|gb|AAG60098.1|AC073178_9 disease resistance protein, putative [Arabidopsis thaliana]
          Length = 1398

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 339/1120 (30%), Positives = 509/1120 (45%), Gaps = 232/1120 (20%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH---- 56
            +DS+D  + VGI G  GIGK+T+A+ + +Q S  F+ S F+      +      +H    
Sbjct: 268  LDSTDERRTVGISGPSGIGKSTIARVLHNQISDGFQMSVFMKFKPSYTRPICSDDHDVKL 327

Query: 57   -LQKQMLSTTLSE---KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQ 112
             L++Q L+  +++   K+   G       +  V   K+LIVLD V+++ QL  +   +  
Sbjct: 328  QLEQQFLAQLINQEDIKIHQLGT-----AQNFVMGKKVLIVLDGVDQLVQLLAMPKAV-C 381

Query: 113  FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
             G GSRI++TT+D+++L+ F  + K IY V+     EA + FC  AF  +  P+D     
Sbjct: 382  LGPGSRIIITTQDQQLLKAF--QIKHIYNVDFPPDHEALQIFCIHAFGHDS-PDDGFEKL 438

Query: 173  RSVVSYTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT 231
             + V+   GN PL L V+GS      K  W   L  L    + EI  I   LK S++ L 
Sbjct: 439  ATKVTRLAGNLPLGLRVMGSHFRGMSKEDWKGELPRLRIRLDGEIGSI---LKFSYDVLD 495

Query: 232  PRVKSIFLDIACFF--EGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDI 286
               K +FL IACFF  EG D  F    L    S+V   L +L+ +SL+S       MH++
Sbjct: 496  DEDKDLFLHIACFFNDEGIDHTF-EDTLRHKFSNVQRGLQVLVQRSLIS-EDLTQPMHNL 553

Query: 287  LQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS-KIKGINLDP 345
            L ++GR+IVR +S  EPGKR  L D KEI  VL  + G++++ GI  ++   +  +N+  
Sbjct: 554  LVQLGREIVRNQSVYEPGKRQFLVDGKEICEVLTSHTGSESVIGINFEVYWSMDELNISD 613

Query: 346  RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
            R F  MSNL+ F+F                 ++ SY ++ LP GL+YLP KLR LHWD Y
Sbjct: 614  RVFEGMSNLQFFRF-----------------DENSYGRLHLPQGLNYLPPKLRILHWDYY 656

Query: 406  PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACV------------------------- 440
            P+ +LPS F  K LV++ L+ S++E+ WEG +  V                         
Sbjct: 657  PMTSLPSKFNLKFLVKIILKHSELEKLWEGIQPLVNLKVMDLRYSSHLKELPNLSTAINL 716

Query: 441  --------------PSSIQNFKYLSALSFKGCQSLRSFPSNL-HFVCPVTINFSYCVNLI 485
                          PSSI N   + +L  +GC SL   PS++ + +    ++   C +L+
Sbjct: 717  LEMVLSDCSSLIELPSSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLV 776

Query: 486  EFPQISGKVTRL----YLGQSAIEEVPSSIECLTDLEVLDLRGCKR-------------- 527
            E P   G +  L     +G S++ E+PSSI  L +LE     GC                
Sbjct: 777  ELPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISL 836

Query: 528  ----LKRIS------------------------------TSFCKLRSLVTLILLGCLNLE 553
                LKRIS                              +S   L +L  L L GC +L 
Sbjct: 837  KILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGCSSLV 896

Query: 554  HFPEILEKMEHLKRIY-SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
              P  +  + +L+ +Y S+ + + ELPSS  NL  L+ L + +CS L  LP +IG+L  L
Sbjct: 897  ELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNLINL 956

Query: 613  YYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYA 669
              + L+  S++ +LPSS+     L+ LD S C  L   P +   L+ L  + L   S  +
Sbjct: 957  QELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSECS--S 1014

Query: 670  VREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC-- 726
            + E+P  I  L +L+ LYLS  ++   LP+ I  +  L+ +   D +   SL ELPL   
Sbjct: 1015 LVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKL---DLSGCSSLVELPLSIG 1071

Query: 727  ----LKYLHLIDCKMLQSLP--VLPFCLESLDLTGCNMLRSLP----------------- 763
                LK L+L  C  L  LP  +    L+ LDL+GC+ L  LP                 
Sbjct: 1072 NLINLKTLNLSGCSSLVELPSSIGNLNLKKLDLSGCSSLVELPSSIGNLINLKKLDLSGC 1131

Query: 764  ----ELPLC------LQYLNLEDCNMLRSLPELP---LCLQLLTVRNCNRLQSLPEI--- 807
                ELPL       LQ L L +C+ L  LP      + LQ L +  C+ L  LP     
Sbjct: 1132 SSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGN 1191

Query: 808  LLCLQELDASVLEKLSK--HSPD-----LQWAPESLKSAAICF-------EFTNCLKLNG 853
            L+ L++LD +   KL      PD     +  + ESL++ A  F       +F +C KLN 
Sbjct: 1192 LINLKKLDLNKCTKLVSLPQLPDSLSVLVAESCESLETLACSFPNPQVWLKFIDCWKLNE 1251

Query: 854  KANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFS-NQSSG 912
            K             R + + +    Y M               LPG E+P +F+   ++G
Sbjct: 1252 KG------------RDIIVQTSTSNYTM---------------LPGREVPAFFTYRATTG 1284

Query: 913  SSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYV 952
             S+ ++L     CR    F  C +L  K    DC  +  V
Sbjct: 1285 GSLAVKL-NERHCRTSCRFKACILLVRKGDKIDCEEWGSV 1323


>gi|334183770|ref|NP_564971.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196827|gb|AEE34948.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1400

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 339/1120 (30%), Positives = 509/1120 (45%), Gaps = 232/1120 (20%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH---- 56
            +DS+D  + VGI G  GIGK+T+A+ + +Q S  F+ S F+      +      +H    
Sbjct: 270  LDSTDERRTVGISGPSGIGKSTIARVLHNQISDGFQMSVFMKFKPSYTRPICSDDHDVKL 329

Query: 57   -LQKQMLSTTLSE---KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQ 112
             L++Q L+  +++   K+   G       +  V   K+LIVLD V+++ QL  +   +  
Sbjct: 330  QLEQQFLAQLINQEDIKIHQLGT-----AQNFVMGKKVLIVLDGVDQLVQLLAMPKAV-C 383

Query: 113  FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
             G GSRI++TT+D+++L+ F  + K IY V+     EA + FC  AF  +  P+D     
Sbjct: 384  LGPGSRIIITTQDQQLLKAF--QIKHIYNVDFPPDHEALQIFCIHAFGHDS-PDDGFEKL 440

Query: 173  RSVVSYTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT 231
             + V+   GN PL L V+GS      K  W   L  L    + EI  I   LK S++ L 
Sbjct: 441  ATKVTRLAGNLPLGLRVMGSHFRGMSKEDWKGELPRLRIRLDGEIGSI---LKFSYDVLD 497

Query: 232  PRVKSIFLDIACFF--EGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDI 286
               K +FL IACFF  EG D  F    L    S+V   L +L+ +SL+S       MH++
Sbjct: 498  DEDKDLFLHIACFFNDEGIDHTF-EDTLRHKFSNVQRGLQVLVQRSLIS-EDLTQPMHNL 555

Query: 287  LQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS-KIKGINLDP 345
            L ++GR+IVR +S  EPGKR  L D KEI  VL  + G++++ GI  ++   +  +N+  
Sbjct: 556  LVQLGREIVRNQSVYEPGKRQFLVDGKEICEVLTSHTGSESVIGINFEVYWSMDELNISD 615

Query: 346  RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
            R F  MSNL+ F+F                 ++ SY ++ LP GL+YLP KLR LHWD Y
Sbjct: 616  RVFEGMSNLQFFRF-----------------DENSYGRLHLPQGLNYLPPKLRILHWDYY 658

Query: 406  PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACV------------------------- 440
            P+ +LPS F  K LV++ L+ S++E+ WEG +  V                         
Sbjct: 659  PMTSLPSKFNLKFLVKIILKHSELEKLWEGIQPLVNLKVMDLRYSSHLKELPNLSTAINL 718

Query: 441  --------------PSSIQNFKYLSALSFKGCQSLRSFPSNL-HFVCPVTINFSYCVNLI 485
                          PSSI N   + +L  +GC SL   PS++ + +    ++   C +L+
Sbjct: 719  LEMVLSDCSSLIELPSSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLV 778

Query: 486  EFPQISGKVTRL----YLGQSAIEEVPSSIECLTDLEVLDLRGCKR-------------- 527
            E P   G +  L     +G S++ E+PSSI  L +LE     GC                
Sbjct: 779  ELPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISL 838

Query: 528  ----LKRIS------------------------------TSFCKLRSLVTLILLGCLNLE 553
                LKRIS                              +S   L +L  L L GC +L 
Sbjct: 839  KILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGCSSLV 898

Query: 554  HFPEILEKMEHLKRIY-SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
              P  +  + +L+ +Y S+ + + ELPSS  NL  L+ L + +CS L  LP +IG+L  L
Sbjct: 899  ELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNLINL 958

Query: 613  YYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYA 669
              + L+  S++ +LPSS+     L+ LD S C  L   P +   L+ L  + L   S  +
Sbjct: 959  QELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSECS--S 1016

Query: 670  VREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC-- 726
            + E+P  I  L +L+ LYLS  ++   LP+ I  +  L+ +   D +   SL ELPL   
Sbjct: 1017 LVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKL---DLSGCSSLVELPLSIG 1073

Query: 727  ----LKYLHLIDCKMLQSLP--VLPFCLESLDLTGCNMLRSLP----------------- 763
                LK L+L  C  L  LP  +    L+ LDL+GC+ L  LP                 
Sbjct: 1074 NLINLKTLNLSGCSSLVELPSSIGNLNLKKLDLSGCSSLVELPSSIGNLINLKKLDLSGC 1133

Query: 764  ----ELPLC------LQYLNLEDCNMLRSLPELP---LCLQLLTVRNCNRLQSLPEI--- 807
                ELPL       LQ L L +C+ L  LP      + LQ L +  C+ L  LP     
Sbjct: 1134 SSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGN 1193

Query: 808  LLCLQELDASVLEKLSK--HSPD-----LQWAPESLKSAAICF-------EFTNCLKLNG 853
            L+ L++LD +   KL      PD     +  + ESL++ A  F       +F +C KLN 
Sbjct: 1194 LINLKKLDLNKCTKLVSLPQLPDSLSVLVAESCESLETLACSFPNPQVWLKFIDCWKLNE 1253

Query: 854  KANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFS-NQSSG 912
            K             R + + +    Y M               LPG E+P +F+   ++G
Sbjct: 1254 KG------------RDIIVQTSTSNYTM---------------LPGREVPAFFTYRATTG 1286

Query: 913  SSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYV 952
             S+ ++L     CR    F  C +L  K    DC  +  V
Sbjct: 1287 GSLAVKL-NERHCRTSCRFKACILLVRKGDKIDCEEWGSV 1325


>gi|27764546|gb|AAO23076.1| R 1 protein [Glycine max]
          Length = 902

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 252/764 (32%), Positives = 359/764 (46%), Gaps = 109/764 (14%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V I+GI GMGG+GKTTLA A+++  +  F+ SCF+ +VR  S    GL+H Q  
Sbjct: 204 VGSDDLVHIIGIHGMGGLGKTTLALAVYNFIALHFDESCFLQNVREES-NKHGLKHFQSI 262

Query: 61  MLSTTLSEK--LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS  L EK     +        + R+RR K+L++LDDV++  QL+ ++G  D FG GSR
Sbjct: 263 LLSKLLGEKDITLTSWQEGASMIQHRLRRKKVLLILDDVDKREQLEAIVGRSDWFGPGSR 322

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRDK +L+    E ++ Y V  L    A +     AFK        +     VV+Y
Sbjct: 323 VIITTRDKHLLKYH--EVERTYEVKVLNHNAALQLLTWNAFKREKIDPIYDDVLNRVVTY 380

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+GS L  K  + W   +    RI   EI     ILK+SF+ L    K++F
Sbjct: 381 ASGLPLALEVIGSDLFGKTVAEWESAVEHYKRIPSDEI---LKILKVSFDALGEEQKNVF 437

Query: 239 LDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSIS---GNFLNMHDILQEMG 291
           LDIAC F+G    E  D + +   + +   + +L++KSL+ ++      + MHD++Q+MG
Sbjct: 438 LDIACCFKGYKWTEVDDILRAFYGNCKKHHIGVLVEKSLIKLNCYDSGTVEMHDLIQDMG 497

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS---KIKGINLDPRAF 348
           R+I RQ S +EP K  RLW PK+I +VLKHN GT  IE I LD S   K + +  +  AF
Sbjct: 498 REIERQRSPEEPWKCKRLWSPKDIFQVLKHNTGTSKIEIICLDFSISDKEETVEWNENAF 557

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M NL++      KF                        G +Y P+ L  L W  YP  
Sbjct: 558 MKMENLKILIIRNGKF----------------------SKGPNYFPEGLTVLEWHRYPSN 595

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            LP NF P NL    L C   +      +   PS    F +L+ L+F  C+ L   P   
Sbjct: 596 CLPYNFHPNNL----LICKLPDSSITSFELHGPS---KFWHLTVLNFDQCEFLTQIPDVS 648

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
                  ++F +C +LI                     V  SI  L  L+ L   GC++L
Sbjct: 649 DLPNLKELSFDWCESLI--------------------AVDDSIGFLNKLKKLSAYGCRKL 688

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
           +        L SL TL L GC +LE+FPEIL +ME++K +  D  PI ELP SF+NL GL
Sbjct: 689 RSFPP--LNLTSLETLQLSGCSSLEYFPEILGEMENIKALDLDGLPIKELPFSFQNLIGL 746

Query: 589 EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC----- 643
             L +  C                         I QLP S+A+   L      +C     
Sbjct: 747 CRLTLNSC------------------------GIIQLPCSLAMMPELSVFRIENCNRWHW 782

Query: 644 -------KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL 696
                  + + S   +  L   AM      D+ +    +     + +E L LSGNNF  L
Sbjct: 783 VESEEGEEKVGSMISSKELWFIAMNCNLCDDFFLTGSKR----FTRVEYLDLSGNNFTIL 838

Query: 697 PAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           P   K++  LR + + D   LQ +  LP  L+Y    +C  L S
Sbjct: 839 PEFFKELQFLRALMVSDCEHLQEIRGLPPNLEYFDARNCASLTS 882



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 115/274 (41%), Gaps = 26/274 (9%)

Query: 561 KMEHLKRIYSDRTP-ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAA 619
           K  HL  +  D+   +T++P    +LP L+ L  + C  L  + D+IG L  L  +  +A
Sbjct: 626 KFWHLTVLNFDQCEFLTQIPD-VSDLPNLKELSFDWCESLIAVDDSIGFLNKLKKL--SA 682

Query: 620 SAISQLPSSVALS-NMLRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIPQEI 677
               +L S   L+   L +L  S C  LE FP   +LG +  +  L +    ++E+P   
Sbjct: 683 YGCRKLRSFPPLNLTSLETLQLSGCSSLEYFPE--ILGEMENIKALDLDGLPIKELPFSF 740

Query: 678 AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM 737
             L  L  L L+      LP  +  M +L    +E+ N    +       K   +I  K 
Sbjct: 741 QNLIGLCRLTLNSCGIIQLPCSLAMMPELSVFRIENCNRWHWVESEEGEEKVGSMISSKE 800

Query: 738 LQSLPV-LPFC-------------LESLDLTGCNMLRSLPELPLCLQYLN---LEDCNML 780
           L  + +    C             +E LDL+G N    LPE    LQ+L    + DC  L
Sbjct: 801 LWFIAMNCNLCDDFFLTGSKRFTRVEYLDLSG-NNFTILPEFFKELQFLRALMVSDCEHL 859

Query: 781 RSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL 814
           + +  LP  L+    RNC  L S  + +L  Q L
Sbjct: 860 QEIRGLPPNLEYFDARNCASLTSSTKSMLLNQVL 893


>gi|357449951|ref|XP_003595252.1| Heat shock protein [Medicago truncatula]
 gi|355484300|gb|AES65503.1| Heat shock protein [Medicago truncatula]
          Length = 1501

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 241/674 (35%), Positives = 337/674 (50%), Gaps = 101/674 (14%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFD-QFSHEFEGSCFVSDVRGNSETAGGLEHLQK 59
           + S +   +VGI+G GG+GK+TLA+A+++ Q S +F+G CF+ D+R N+    GL  LQ+
Sbjct: 274 IGSHEGANMVGIYGTGGVGKSTLARAVYNNQISDQFDGVCFLDDIRENA-INHGLVQLQE 332

Query: 60  QMLSTTLSEK-LEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            +LS  L EK + V   N      K R++R K+L+VLDDV++  Q++ L G  D FG GS
Sbjct: 333 TLLSEILCEKDIRVGNVNRGISIIKRRLQRKKVLLVLDDVDKAKQIQVLAGGHDWFGSGS 392

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAF---KENHCPEDLNWHSRS 174
           +I++TTRDK +L     E   IY V  L  E++ E F   AF   K + C  D+   S  
Sbjct: 393 KIIITTRDKHLLAIH--EILNIYEVKQLNHEKSLELFNWHAFRNRKMDPCYSDI---SNR 447

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
            VSY  G PL LEV+GS L  KR   W   L    RI   +IH++   LKIS++ L    
Sbjct: 448 AVSYAHGLPLALEVIGSHLFGKRLDVWKSALDKYERILHEDIHEV---LKISYDDLDEDD 504

Query: 235 KSIFLDIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNF-LNMHDILQEM 290
           K IFLDIACF+  ++  +   +L     S  + + +L DKSL+ I GN  + MHD++Q+M
Sbjct: 505 KGIFLDIACFYNSDEMSYAKEMLYLHGFSAENGIQVLTDKSLIKIDGNGCVRMHDLVQDM 564

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
           GR+IVRQES  EPGKRSRLW   +I  VL+ N GTD +E I +DL   K +     AF  
Sbjct: 565 GREIVRQESTLEPGKRSRLWSDDDIIHVLEENTGTDTVEVIIIDLYNDKEVQWSGEAFKK 624

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M  L++      +F+                       G   LP  LR L W  YP ++L
Sbjct: 625 MKKLKILIIRSARFFR----------------------GPQKLPNSLRVLDWSGYPSQSL 662

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS---- 466
           P +F PK L  L+L  S +              I+ F+ LS L F+GC+ L   PS    
Sbjct: 663 PIDFNPKKLNILSLHESYL---------ISFKPIKVFESLSFLDFEGCKLLTELPSLSGL 713

Query: 467 -NLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSA----IEEVPSSIECLTDLEVLD 521
            NL  +C        C NLI   +  G + +L L  +     +E +  +I  L  LE+LD
Sbjct: 714 LNLGALC-----LDDCTNLITIHKSVGFLNKLVLLSTQRCNELEVLVPNIN-LPSLEILD 767

Query: 522 LRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
           +RGC  LK                         FPE+L  ME+++ +Y D+T I +LP S
Sbjct: 768 MRGCSCLK------------------------SFPEVLGVMENIRDVYLDQTSIDKLPFS 803

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
             NL GL  LF+ +C  L  L D+I  L  L  + A      QL             +S 
Sbjct: 804 IRNLVGLRRLFLRECMSLTQLTDSIRILPKLEILTAYGCRGFQL------------FESK 851

Query: 642 HCKGLESFPRTFLL 655
              G E FP+  L+
Sbjct: 852 EKVGSEVFPKAMLV 865


>gi|356561829|ref|XP_003549179.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1090

 Score =  320 bits (820), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 253/775 (32%), Positives = 375/775 (48%), Gaps = 131/775 (16%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V I+GI GMGG+GKTTLA A+++  +  F+ SCF+ +VR  S   G L+HLQ  
Sbjct: 247 VGSHDVVHIIGIHGMGGLGKTTLALAVYNLIALHFDESCFLQNVREESNKHG-LKHLQSI 305

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +LS  L EK       +     I H    R++R K+L++LDDV++  QLK ++G  D FG
Sbjct: 306 ILSKLLGEKDINLTSWQEGASMIQH----RLQRKKVLLILDDVDKRQQLKAIVGRPDWFG 361

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFK-ENHCPEDLNWHSR 173
            GSR+++TTRDK +L+    E ++ Y V  L    A +     AFK E + P   +  +R
Sbjct: 362 PGSRVIITTRDKHILKYH--EVERTYEVKVLNQSAALQLLKWNAFKREKNDPSYEDVLNR 419

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            VV+Y  G PL LE++GS+L  K  + W   +    RI   EI    +ILK+SF+ L   
Sbjct: 420 -VVTYASGLPLALEIIGSNLFGKTVAEWESAMEHYKRIPSDEI---LEILKVSFDALGEE 475

Query: 234 VKSIFLDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQE 289
            K++FLDIAC  +G    E +  +  + D+     +D+L+DKSL  +    + MHD++Q+
Sbjct: 476 QKNVFLDIACCLKGCKLTEVEHMLRGLYDNCMKHHIDVLVDKSLTKVRHGIVEMHDLIQD 535

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS---KIKGINLDPR 346
           MGR+I RQ S +EPGKR RLW PK+I +VLKHN GT  IE I++D S   K + +  +  
Sbjct: 536 MGREIERQRSPEEPGKRKRLWSPKDIIQVLKHNTGTSKIEIIYVDFSISDKEETVEWNEN 595

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           AF  M NL++      KF                        G +Y P+ LR L W  YP
Sbjct: 596 AFMKMENLKILIIRNGKF----------------------SKGPNYFPQGLRVLEWHRYP 633

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY-------LSALSFKGCQ 459
              LPSNF P NLV   L                 SS+ +F++       L  L F  C+
Sbjct: 634 SNCLPSNFDPINLVICKL---------------PDSSMTSFEFHGSSKASLKILKFDWCK 678

Query: 460 SLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEV 519
            L   P          ++F +C +L+                     V  SI  L  L+ 
Sbjct: 679 FLTQIPDVSDLPNLRELSFQWCESLV--------------------AVDDSIGFLNKLKK 718

Query: 520 LDLRGCKRLKRISTSF--CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
           L+  GC++L    TSF    L SL TL L  C +LE+FPEIL +ME+++R+     PI E
Sbjct: 719 LNAYGCRKL----TSFPPLHLTSLETLELSHCSSLEYFPEILGEMENIERLDLHGLPIKE 774

Query: 578 LPSSFENLPGLEVLFVEDCS------KLDNLPDNIGSLEYL----YYILAAASAISQLPS 627
           LP SF+NL GL+ L +  C        L  +P  + + +++    +  + +  A  ++ S
Sbjct: 775 LPFSFQNLIGLQQLSMFGCGIVQLRCSLAMMP-KLSAFKFVNCNRWQWVESEEAEEKVGS 833

Query: 628 SVALSNML--RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEI 685
            ++        S  + +C   + F   FL G                    + YL+    
Sbjct: 834 IISSEARFWTHSFSAKNCNLCDDF---FLTGFKKFA--------------HVGYLN---- 872

Query: 686 LYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
             LS NNF  LP   K++  L  +++     LQ +  +P  L+  +  +C  L S
Sbjct: 873 --LSRNNFTILPEFFKELQFLGSLNVSHCKHLQEIRGIPQNLRLFNARNCASLTS 925



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 80/355 (22%), Positives = 141/355 (39%), Gaps = 62/355 (17%)

Query: 588 LEVLFVEDCSKLDNLPD-----NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSH 642
           L++L  + C  L  +PD     N+  L + +       ++  +  S+   N L+ L++  
Sbjct: 669 LKILKFDWCKFLTQIPDVSDLPNLRELSFQW-----CESLVAVDDSIGFLNKLKKLNAYG 723

Query: 643 CKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
           C+ L SFP   L  L  + L H S  ++   P+ +  + ++E L L G   + LP   + 
Sbjct: 724 CRKLTSFPPLHLTSLETLELSHCS--SLEYFPEILGEMENIERLDLHGLPIKELPFSFQN 781

Query: 703 MSQLRFIHLEDFNMLQ---SLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNML 759
           +  L+ + +    ++Q   SL  +P  L     ++C   Q +       E  +    +++
Sbjct: 782 LIGLQQLSMFGCGIVQLRCSLAMMP-KLSAFKFVNCNRWQWVES-----EEAEEKVGSII 835

Query: 760 RSLPELPLCLQYLNLEDCNM-----LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL 814
            S  E        + ++CN+     L    +      L   RN      LPE    LQ L
Sbjct: 836 SS--EARFWTHSFSAKNCNLCDDFFLTGFKKFAHVGYLNLSRN--NFTILPEFFKELQFL 891

Query: 815 DASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIAS 874
             S+     KH  +++  P++L+     F   NC  L   + +                 
Sbjct: 892 -GSLNVSHCKHLQEIRGIPQNLR----LFNARNCASLTSSSKS----------------- 929

Query: 875 LRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICI----QLPPHSSC 925
                 M +N++L E  G+  V PG+ IP+W  +QSSG S       + PP   C
Sbjct: 930 ------MLLNQELHEAGGTQFVFPGTRIPEWLDHQSSGHSSSFWFRNKFPPKLLC 978


>gi|317415950|emb|CAR94516.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 807

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 223/613 (36%), Positives = 325/613 (53%), Gaps = 61/613 (9%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            ++ V+++GI GM GIGK+T+AKA+  +  ++F+   F+S V G       L H+++Q+ 
Sbjct: 218 GTEEVRVIGICGMPGIGKSTIAKALSQRIRNQFDAFSFISKV-GEISRKKSLFHIKEQLC 276

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIG-----ELD-QFGQG 116
              L+  ++V   N+    ++R+   ++LIVLD+V E+ Q+  + G     EL  +FG+G
Sbjct: 277 DHLLN--MQVTTKNVDDVIRKRLCNKRVLIVLDNVEELEQIDAVAGNDGADELSSRFGKG 334

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           S+I++TT  +R+L  +     KIY +  L  +E+   FC  AFK++H  +         +
Sbjct: 335 SKIIITTACERLLINYN---PKIYTIEKLTQDESLLLFCRKAFKKDHPMDGYEKLCYEFL 391

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL-TPRVK 235
            Y  G PL LEV G+SL  +    W   L  L     S  + I + LK SF+ L     +
Sbjct: 392 DYVDGLPLALEVFGNSLLDRSVEDWSSRLASLKDDNYSGKNKIVNYLKESFDGLENQEQR 451

Query: 236 SIFLDIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
            IFLDIACFF+GED   V +I +         L+IL +K LVSI G  L MH++LQ+MGR
Sbjct: 452 EIFLDIACFFKGEDACRVENIFESCGYYPGINLNILCEKYLVSIVGGKLWMHNLLQQMGR 511

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           ++VR ES+KE G RSRLW   E   VLK NKGTDA++GIFL L   + ++L    F+NM 
Sbjct: 512 EVVRGESKKE-GARSRLWLHTEAIHVLKGNKGTDAVQGIFLSLPHPEKVHLKKDPFSNMD 570

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NLRL K Y                       V+    L+YL  +L +L W  YPL++LPS
Sbjct: 571 NLRLLKIY----------------------NVEFSGCLEYLSDELSFLEWHKYPLKSLPS 608

Query: 413 NFKPKNLVELNLRCSKVEQPWEG----------------EKACVPSSIQNFKYLSALSFK 456
           +F+P  LVELNL  S++EQ WE                 +K            L  L  K
Sbjct: 609 SFEPDKLVELNLSESEIEQLWEEIERPLEKLLILNLSDCQKLIKIPDFDKVPNLEQLILK 668

Query: 457 GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS---GKVTRLYLGQSAIEEVPSSIEC 513
           GC SL   P  ++       N S C  L + P+I     ++ +L+L  +AIEE+P+SIE 
Sbjct: 669 GCTSLSEVPDIINLRSLTNFNLSGCSKLEKIPEIGEDMKQLRKLHLDGTAIEELPTSIEH 728

Query: 514 LTDLEVLDLRGCKRLKRISTSFC-KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR 572
           L+ L +LDLR CK L  +   FC  L SL  L L GC NL+  P+ L  +E L+ + +  
Sbjct: 729 LSGLTLLDLRDCKNLLSLPDVFCDSLTSLQILNLSGCSNLDKLPDNLGSLECLQELDASG 788

Query: 573 TPI--TELPSSFE 583
           T I  T +  +F+
Sbjct: 789 TAIRATNINQAFD 801



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 27/200 (13%)

Query: 493 KVTRLYLGQSAIEEVPSSIE-CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
           K+  L L +S IE++   IE  L  L +L+L  C++L +I   F K+ +L  LIL GC +
Sbjct: 614 KLVELNLSESEIEQLWEEIERPLEKLLILNLSDCQKLIKIP-DFDKVPNLEQLILKGCTS 672

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
           L   P+I+                        NL  L    +  CSKL+ +P+    ++ 
Sbjct: 673 LSEVPDII------------------------NLRSLTNFNLSGCSKLEKIPEIGEDMKQ 708

Query: 612 LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-V 670
           L  +    +AI +LP+S+   + L  LD   CK L S P  F   L+++ +L++S  + +
Sbjct: 709 LRKLHLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVFCDSLTSLQILNLSGCSNL 768

Query: 671 REIPQEIAYLSSLEILYLSG 690
            ++P  +  L  L+ L  SG
Sbjct: 769 DKLPDNLGSLECLQELDASG 788



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 126/299 (42%), Gaps = 73/299 (24%)

Query: 545 ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
           +L G    +    I   + H ++++  + P     S+ +NL  L++  VE    L+ L D
Sbjct: 536 VLKGNKGTDAVQGIFLSLPHPEKVHLKKDPF----SNMDNLRLLKIYNVEFSGCLEYLSD 591

Query: 605 NIGSLEYLYYILAAASAISQLPSSVALSNMLR-SLDSSHCKGL-----ESFPRTFLLGLS 658
            +  LE+  Y L +      LPSS     ++  +L  S  + L         +  +L LS
Sbjct: 592 ELSFLEWHKYPLKS------LPSSFEPDKLVELNLSESEIEQLWEEIERPLEKLLILNLS 645

Query: 659 -AMGLLHISDY---------------AVREIPQEIAYLSSLEILYLSG-NNFESLPAIIK 701
               L+ I D+               ++ E+P +I  L SL    LSG +  E +P I +
Sbjct: 646 DCQKLIKIPDFDKVPNLEQLILKGCTSLSEVP-DIINLRSLTNFNLSGCSKLEKIPEIGE 704

Query: 702 QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRS 761
            M QLR +HL+      ++ ELP  +++L                 L  LDL  C  L S
Sbjct: 705 DMKQLRKLHLDG----TAIEELPTSIEHLS---------------GLTLLDLRDCKNLLS 745

Query: 762 LPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPE---ILLCLQELDAS 817
           LP++           C+ L SL       Q+L +  C+ L  LP+    L CLQELDAS
Sbjct: 746 LPDVF----------CDSLTSL-------QILNLSGCSNLDKLPDNLGSLECLQELDAS 787


>gi|255561510|ref|XP_002521765.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223538978|gb|EEF40575.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1018

 Score =  319 bits (818), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 215/577 (37%), Positives = 306/577 (53%), Gaps = 70/577 (12%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           + V +VGIWGMGGIGKTT+AK I+D  S +FE  CF+S+V+ + E  G    LQ+++LS 
Sbjct: 206 NGVHMVGIWGMGGIGKTTIAKLIYDMLSSQFEVHCFLSNVKEHFEKHGAAV-LQQKLLSN 264

Query: 65  TLSEKLEVAGPNIP---HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
            LSE+  +         +  K  +   K+L+VLDDV++  QL+ L  E + FG+GSRI++
Sbjct: 265 VLSERRSLNAWTFNASFNVIKRALHHRKVLLVLDDVDDYKQLEALAREPNWFGEGSRIII 324

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           T+RD  +L+    E   IY V  L+ + A + F   AFK+N+   +    ++   SY KG
Sbjct: 325 TSRDYHLLDSHGVE--SIYEVQYLKTDHALQLFSLHAFKQNNAKIEYLELTKQFSSYAKG 382

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL ++V GS L  +    W  V + L +I    IHD+   L+ISF  L    + +FLDI
Sbjct: 383 LPLAVKVFGSFLNGRNILEWQSVKNKLAKIPCIGIHDV---LRISFEGLDETQRDVFLDI 439

Query: 242 ACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
           ACFF G  K+F   IL            +L DK+L++I  N L +HD+L+EMG +IV QE
Sbjct: 440 ACFFNGLSKEFARDILGGCGFFPDIAFAVLKDKALITIDDNELLVHDLLREMGHEIVYQE 499

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
           S++EPGKRSRLW P +I  VL  + GT  +EGIFLD  K++ ++L   AF  M NLR+ K
Sbjct: 500 SKEEPGKRSRLWIPDDIFHVLTKSTGTKIVEGIFLDTFKVRKMHLSSEAFAKMRNLRMLK 559

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPN-GLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
           FY    Y   K            +KV LP+ GL Y+   LR  HW+ YP ++LPS+F  +
Sbjct: 560 FY----YTGSKY----------MNKVHLPDEGLHYMSSNLRLFHWEGYPSKSLPSSFHAE 605

Query: 418 NLVELNLRCSKVEQPWEGEK---------------------------------------A 438
           NL+ELNL  S +EQ W G +                                       A
Sbjct: 606 NLIELNLVGSNLEQLWTGVQHLVNLKRIDLSYSRHLTRIPDLSKAQNLERMELTTCQNLA 665

Query: 439 CVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLY 498
            V SS+Q    L  L    C +LRS P  ++      +  + C NL + P+ISG +  L 
Sbjct: 666 AVSSSVQCLNKLVFLDLSDCTNLRSLPGGINLNSLKALVLTSCSNLAKLPEISGDIRFLC 725

Query: 499 LGQSAIEEVPSSIECLTD----LEVLDLRGCKRLKRI 531
           L  +AIEE+P  + CL D    +++L    C  L+ I
Sbjct: 726 LSGTAIEELPQRLRCLLDVPPCIKILKAWHCTSLEAI 762



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 187/434 (43%), Gaps = 104/434 (23%)

Query: 658  SAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNML 717
            S + L H   Y  + +P      + +E L L G+N E L   ++ +  L+ I L     L
Sbjct: 583  SNLRLFHWEGYPSKSLPSSFHAENLIE-LNLVGSNLEQLWTGVQHLVNLKRIDLSYSRHL 641

Query: 718  QSLP-----------ELPLC---------------LKYLHLIDCKMLQSLP--VLPFCLE 749
              +P           EL  C               L +L L DC  L+SLP  +    L+
Sbjct: 642  TRIPDLSKAQNLERMELTTCQNLAAVSSSVQCLNKLVFLDLSDCTNLRSLPGGINLNSLK 701

Query: 750  SLDLTGCNMLRSLPELP-----LCLQYLNLEDC-NMLRSLPELPLCLQLLTVRNCNRLQS 803
            +L LT C+ L  LPE+      LCL    +E+    LR L ++P C+++L   +C  L++
Sbjct: 702  ALVLTSCSNLAKLPEISGDIRFLCLSGTAIEELPQRLRCLLDVPPCIKILKAWHCTSLEA 761

Query: 804  LPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADS 863
            +P I         S+ E      PD+++           ++F NC  L+ K  + +  D+
Sbjct: 762  IPRI--------KSLWE------PDVEY-----------WDFANCFNLDQKETSNLAEDA 796

Query: 864  LLRIRHMAIASLRLGYEMAINEKLSELRGS--LIVLPGSEIPDWFSNQSSGSSICIQLPP 921
                  M  AS          +++ + +G+      PGSE+P+ F N+   SS+   LP 
Sbjct: 797  QWSFLVMETAS----------KQVHDYKGNPGQFCFPGSEVPESFCNEDIRSSLTFMLP- 845

Query: 922  HSSCRNLIGFAFCAVLDSK------KVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNS 975
             S+ R L+G A C VL S+      KV   C  +F  + Q DL   +          Y S
Sbjct: 846  -SNGRQLMGIALCVVLGSEEPYSVSKVRCCCKCHFKSTNQDDLIFTS---------QYGS 895

Query: 976  RYIEDL-IDSDRVILGFKPC------LNVGFPDGYHHTIATFKF---FAERKFYKIKRCG 1025
               E++ ++SD ++L F+        LN  F + +    A+F+F   +  +K   +++ G
Sbjct: 896  INHENVTLNSDHILLWFESWKSRSDKLNNSFTECHE---ASFEFCISYGFKKHINVRKYG 952

Query: 1026 LCPVYANPSETKDN 1039
            +  +YA   ET +N
Sbjct: 953  VHLIYA--EETSEN 964


>gi|255563218|ref|XP_002522612.1| phosphoprotein phosphatase [Ricinus communis]
 gi|223538088|gb|EEF39699.1| phosphoprotein phosphatase [Ricinus communis]
          Length = 838

 Score =  319 bits (818), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 193/443 (43%), Positives = 269/443 (60%), Gaps = 29/443 (6%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V+I+GIWGMGGIGKTT+A  IFDQ S +FE  CFV++VR   E +  L+ LQ+++L+
Sbjct: 206 SKDVRILGIWGMGGIGKTTIASKIFDQISSQFERICFVANVREKLEKST-LDSLQQEILT 264

Query: 64  TTLSEKLEVAGPNI---PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             L ++    G  I     F ++ + R K+LIVLDDVN+  Q K L+G  D +  GSRI+
Sbjct: 265 KLLGKEYSDLGMPIKLSSSFIRKWITRKKVLIVLDDVNDSEQTKFLVGARDIYSPGSRII 324

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +T+RDK++L+    E   IY V  L +  AF+ F   AFKEN   E L   +R  V Y +
Sbjct: 325 MTSRDKQILKNGGAE---IYEVKKLNYHNAFQLFILRAFKENPPAEALMEVTRMAVEYGQ 381

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL L+VLGS+LC K    W   L  L  I + +I ++   L+ISF+ L    K IFLD
Sbjct: 382 GIPLALKVLGSTLCDKNIKEWRDHLKKLEGISDKKIQNV---LRISFDDLDEDEKEIFLD 438

Query: 241 IACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
           IACFF+ EDK+ V SIL     S    + IL DKSL+++S   + MHD+LQ+MGR IVRQ
Sbjct: 439 IACFFKSEDKNEVESILSSFGRSAITGIRILQDKSLITVSNEKIEMHDLLQQMGRDIVRQ 498

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTD-AIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
           E  K+P KRSRLW+P++I  +L ++ G + ++E I LD+S+I+ I L P AF  MS L+ 
Sbjct: 499 EGVKDPRKRSRLWNPQDIYHLLTNDLGKNISVESISLDMSQIRDIELSPAAFEEMSKLKF 558

Query: 357 FKFYVP------KFYEIEKL--PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
            + +         +Y+  K+  P   T       K+ L   L +LP  LRYL+W  YP +
Sbjct: 559 LRLHTTCLEPGFSYYQQNKVCHPCKRT-------KISLSEELSFLPNGLRYLYWYEYPSK 611

Query: 409 TLPSNFKPKNLVELNLRCSKVEQ 431
           +LP +F P NLV+L+LR S V+Q
Sbjct: 612 SLPLSFCPDNLVQLHLRHSHVQQ 634


>gi|356554611|ref|XP_003545638.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1114

 Score =  319 bits (818), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 207/543 (38%), Positives = 311/543 (57%), Gaps = 42/543 (7%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPN-IP 78
           KTT+A+ IF + S  +EGS F+ +V   S+  G L ++ K++LS  L E L +  P  IP
Sbjct: 294 KTTIAEVIFHKISSRYEGSSFLKNVAEESKRHG-LNYICKELLSKLLREDLHIDTPKVIP 352

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIG-ELDQFGQGSRIVVTTRDKRVLEKFRGEE- 136
                R++R K+LIVLDDVN    L+ L+G   D  G GSR++VTTRDK V+    GE  
Sbjct: 353 SIITRRLKRKKVLIVLDDVNTSELLENLVGVGRDWLGAGSRVIVTTRDKHVI---MGEVV 409

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
            KI+ V  + F+ + E F   AF + +  +     S+  + Y KG PL L+VLGS L  +
Sbjct: 410 DKIHEVKKMNFQNSLELFSLNAFGKTYPQKGYEELSKRAMGYAKGIPLALKVLGSLLRSR 469

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
            ++ W   L  L +I   EI  ++   ++S+  L    K+IFLDI CFF+G+ +D V  I
Sbjct: 470 SENEWDSALSKLKKIPNPEIQAVF---RLSYEGLDDDEKNIFLDITCFFKGQRRDRVTKI 526

Query: 257 LDDSE--SDV-LDILIDKSLVSISG--NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
           L+D    +D+ +  L+DK+L++I+   N ++MHD+++EMGR++VR+ES K PG+RSRLWD
Sbjct: 527 LNDCNFSADIGIRSLLDKALITITSDSNCIDMHDLIREMGREVVREESMKNPGQRSRLWD 586

Query: 312 PKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
           P+E+  +L +N GTD +EGI+LD+++I  INL  +AF  M N+RL  F  PK  E E++ 
Sbjct: 587 PEEVIDILTNNGGTDTVEGIWLDMTQISYINLSSKAFRKMPNMRLLAFQSPK-GEFERIN 645

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
           S           V LP GL++LPK LRYL W+ YPL +LPS+F P+ LVEL++  S +E+
Sbjct: 646 S-----------VYLPKGLEFLPKNLRYLGWNGYPLESLPSSFCPEKLVELSMPYSNLEK 694

Query: 432 PWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS 491
            W G        +QN   L  +   G + L   P   H      ++   C +L   P + 
Sbjct: 695 LWHG--------VQNLPNLERIDLHGSKHLMECPKLSHAPNLKYVSMRGCESL---PYVD 743

Query: 492 GKVTRL-YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
             +  L  L    +  +P SI+ L  L+VL++  CK+L+ I       RSL   ++  C 
Sbjct: 744 ESICSLPKLEILNVSGLPESIKDLPKLKVLEVGECKKLQHIPAL---PRSLQFFLVWNCQ 800

Query: 551 NLE 553
           +L+
Sbjct: 801 SLQ 803



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 174/434 (40%), Gaps = 94/434 (21%)

Query: 644  KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
            KGLE  P+        +  L  + Y +  +P        +E L +  +N E L   ++ +
Sbjct: 651  KGLEFLPKN-------LRYLGWNGYPLESLPSSFCPEKLVE-LSMPYSNLEKLWHGVQNL 702

Query: 704  SQLRFIHLEDFNMLQSLPELPLC--LKYLHLIDCKML----QSLPVLPFCLESLDLTGCN 757
              L  I L     L   P+L     LKY+ +  C+ L    +S+  LP  LE L+++G  
Sbjct: 703  PNLERIDLHGSKHLMECPKLSHAPNLKYVSMRGCESLPYVDESICSLP-KLEILNVSG-- 759

Query: 758  MLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDAS 817
            +  S+ +LP  L+ L + +C  L+ +P LP  LQ   V NC  LQ++             
Sbjct: 760  LPESIKDLPK-LKVLEVGECKKLQHIPALPRSLQFFLVWNCQSLQTV------------- 805

Query: 818  VLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIR--HMAIASL 875
                       L    ES K     F   NC+KL+  + + IL D+++RI      + + 
Sbjct: 806  -----------LSSTIESSKRPNCVFLLPNCIKLDAHSFDAILKDAIVRIELGSKPLPAT 854

Query: 876  RLGYEMAINE---------KLSELRGSLIVLPG--SEIPDWFSNQSSGSSICIQLPPHSS 924
             L  E A  E         +L+        LP    ++ DWF    + + + ++LPP   
Sbjct: 855  ELENEDASLENEDGDFYYFQLARNGKICYCLPARSGKVRDWFHCHFTQALVTVELPP--- 911

Query: 925  CRNLIGFAFCAVLDS-KKVDSDCFRYF----YVSFQFDLEIKTLSE-------------- 965
              NL+GF F  V+   +  +  C+       Y+    D E K +S               
Sbjct: 912  --NLLGFIFYFVVSQVQSCNIGCYGSIGCECYLETSRD-ERKNISSFFVQENILSCLDPP 968

Query: 966  ----TKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAERKFYK- 1020
                  HV + Y+ ++ + +I+    I+  +  +N       HH   TFKFF + +    
Sbjct: 969  FGFTEDHVFIWYDEQFCKQVIE----IIKERKAIND--KSTTHHPKLTFKFFVQTENNND 1022

Query: 1021 ---IKRCGLCPVYA 1031
               IK CG   +Y+
Sbjct: 1023 EVVIKECGFRWMYS 1036


>gi|27764539|gb|AAO23069.1| R 4 protein [Glycine max]
          Length = 895

 Score =  319 bits (817), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 250/763 (32%), Positives = 359/763 (47%), Gaps = 119/763 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V I+GI GMGG+GKTTLA  +++  +  F+ SCF+ +VR  S    GL+HLQ  
Sbjct: 204 VGSDDLVHIIGIHGMGGLGKTTLALEVYNLIALHFDESCFLQNVREES-NKHGLKHLQSI 262

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +LS  L EK       +     I H    R++R K+L++LDDVN+  QLK ++G  D FG
Sbjct: 263 LLSKLLGEKDITLTSWQEGASTIQH----RLQRKKVLLILDDVNKREQLKAIVGRPDWFG 318

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK +L+    E ++ Y V  L    A +     AFK              
Sbjct: 319 PGSRVIITTRDKHLLKCH--EVERTYEVKVLNHNAALQLLTWNAFKREKIDPSYEDVLNR 376

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV+Y  G PL LE++GS++  K  + W   +    RI   EI    +ILK+SF+ L    
Sbjct: 377 VVTYASGLPLALEIIGSNMFGKSVAGWESAVEHYKRIPNDEI---LEILKVSFDALGEEQ 433

Query: 235 KSIFLDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEM 290
           K++FLDIA   +G    E +  + S+ D+     +D+L+DKSL+ +    + MHD++Q +
Sbjct: 434 KNVFLDIAFCLKGCKLTEVEHMLCSLYDNCMKHHIDVLVDKSLIKVKHGIVEMHDLIQVV 493

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS---KIKGINLDPRA 347
           GR+I RQ S +EPGKR RLW PK+I  VLK N GT  IE I LD S   K + +  +  A
Sbjct: 494 GREIERQRSPEEPGKRKRLWLPKDIIHVLKDNTGTSKIEIICLDFSISYKEETVEFNENA 553

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F  M NL++      KF                        G +Y P+ LR L W  YP 
Sbjct: 554 FMKMENLKILIIRNGKF----------------------SKGPNYFPEGLRVLEWHRYPS 591

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQ-PWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS 466
             LPSNF P NLV   L  S ++   + G       S +   +L+ L F  C+ L   P 
Sbjct: 592 NFLPSNFDPINLVICKLPDSSIKSFEFHG-------SSKKLGHLTVLKFDRCKFLTQIPD 644

Query: 467 NLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCK 526
                    ++F  C +L+                     V  SI  L  L+ L   GC+
Sbjct: 645 VSDLPNLRELSFEDCESLV--------------------AVDDSIGFLKKLKKLSAYGCR 684

Query: 527 RLKRISTSF--CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
           +L    TSF    L SL TL L  C +LE+FPEIL +ME+++ +      I ELP SF+N
Sbjct: 685 KL----TSFPPLNLTSLETLQLSSCSSLEYFPEILGEMENIRELRLTGLYIKELPFSFQN 740

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
           L GL +L +  C                         I QLP S+A+   L S  + +C 
Sbjct: 741 LTGLRLLALSGC------------------------GIVQLPCSLAMMPELSSFYTDYCN 776

Query: 645 GLESFPRTFLLG-----LSAMGLLHIS-------DYAVREIPQEIAYLSSLEILYLSGNN 692
             +              +S+   L  +       D+ +    +     + +  L LSGNN
Sbjct: 777 RWQWIELEEGEEKLGSIISSKAQLFCATNCNLCDDFFLAGFKR----FAHVGYLNLSGNN 832

Query: 693 FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
           F  LP   K++  LR + + D   LQ +  LP  L+Y    +C
Sbjct: 833 FTILPEFFKELQFLRTLDVSDCEHLQEIRGLPPILEYFDARNC 875



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 26/275 (9%)

Query: 560 EKMEHLKRIYSDRTP-ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
           +K+ HL  +  DR   +T++P    +LP L  L  EDC  L  + D+IG L+ L  +  +
Sbjct: 623 KKLGHLTVLKFDRCKFLTQIPD-VSDLPNLRELSFEDCESLVAVDDSIGFLKKLKKL--S 679

Query: 619 ASAISQLPSSVALS-NMLRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIPQE 676
           A    +L S   L+   L +L  S C  LE FP   +LG +  +  L ++   ++E+P  
Sbjct: 680 AYGCRKLTSFPPLNLTSLETLQLSSCSSLEYFPE--ILGEMENIRELRLTGLYIKELPFS 737

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI--- 733
              L+ L +L LSG     LP  +  M +L   + +  N  Q +       K   +I   
Sbjct: 738 FQNLTGLRLLALSGCGIVQLPCSLAMMPELSSFYTDYCNRWQWIELEEGEEKLGSIISSK 797

Query: 734 -------DCKMLQSLPVLPF----CLESLDLTGCNMLRSLPELPLCLQY---LNLEDCNM 779
                  +C +     +  F     +  L+L+G N    LPE    LQ+   L++ DC  
Sbjct: 798 AQLFCATNCNLCDDFFLAGFKRFAHVGYLNLSG-NNFTILPEFFKELQFLRTLDVSDCEH 856

Query: 780 LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL 814
           L+ +  LP  L+    RNC    S    +L  Q L
Sbjct: 857 LQEIRGLPPILEYFDARNCVSFTSSSTSMLLNQVL 891


>gi|357514699|ref|XP_003627638.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355521660|gb|AET02114.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1184

 Score =  319 bits (817), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 264/737 (35%), Positives = 369/737 (50%), Gaps = 108/737 (14%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPN-IP 78
           KTTLA AIF + S  +EGSCF+ +V   S+  G L +   ++LS  L E L +  P  I 
Sbjct: 223 KTTLAAAIFQKVSSRYEGSCFLENVTEESKRHG-LSYTYNRLLSKLLGEDLHIETPKVIS 281

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGE-LDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
               +R++RMK  IVLDDV  +  L  LIG   D  G GSR++VTTRDK VL    G   
Sbjct: 282 SMVMKRLKRMKAFIVLDDVRILELLNNLIGAGHDCLGAGSRVIVTTRDKYVLTG--GGID 339

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           +I+ V  +  + +   F   AF +    E     S +VVSYT+GNPL L+VLGS L  K 
Sbjct: 340 EIHEVEKMNSQNSIRLFSLNAFNKILPNEGYEEISNNVVSYTEGNPLALKVLGSFLRTKS 399

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDF-VASI 256
           K  W   L+ L +I  +EI  +   L++S+++L    K IFLDIACFF+G  +   V  I
Sbjct: 400 KKEWNSALNKLKKIPNAEIQKV---LRLSYDELDDTEKDIFLDIACFFKGCGRSSRVTKI 456

Query: 257 LD--DSESDV-LDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           L+  D  +D+ +  L++K+LV+I S N + MHD+LQEMGRQIVR+ES K PG+RSRLW+ 
Sbjct: 457 LNVCDFFADIGIRNLLNKALVTITSTNDIQMHDLLQEMGRQIVREESIKNPGQRSRLWNA 516

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
            EI  VL +N GT A+E I LD+ +I  INL  +AFT M NLRL  F   K++       
Sbjct: 517 SEICDVLTNNNGTSAVESICLDMDQITRINLSSKAFTKMPNLRLLAF---KYH------- 566

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
               +    + V LP GLD+LP  LR   W  YPL  LPSNF P NLVEL+L  S +E+ 
Sbjct: 567 --NRDVKGINYVHLPEGLDFLPNNLRSFEWSAYPLNYLPSNFSPWNLVELHLPYSNLEKL 624

Query: 433 WEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
           W G         QN   L                         I+  +  +LIE P+ S 
Sbjct: 625 WNG--------TQNLPSLE-----------------------RIDLRWSAHLIECPKFSN 653

Query: 493 KVTRLY---LGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG 548
               LY   LG   +I  V  SI  L  LE LD+ GCK L+ + +S  + +S  +L+   
Sbjct: 654 -APNLYGIDLGNCESISHVDPSIFNLPKLEWLDVSGCKSLESLYSS-TRSQSQASLLADR 711

Query: 549 CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD----NLPD 604
           C NL+ F                      +P +  N P +   ++   S +     +LP+
Sbjct: 712 CYNLQEF--------------------ISMPQN-NNDPSITTTWIYFSSHISESLVDLPE 750

Query: 605 NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLH 664
           N     + Y I  + S +++  +   L  +L S    + K L  +               
Sbjct: 751 N-----FAYNIEFSGSTMNEQDTFTTLHKVLPSPCFRYVKSLTFYDCN------------ 793

Query: 665 ISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
                + EIP  I+ LS LE LYL G    SLP  I  + +L F+      MLQS+P LP
Sbjct: 794 ----NISEIPDSISLLSLLESLYLIGCPIISLPESINCLPRLMFLEARYCKMLQSIPSLP 849

Query: 725 LCLKYLHLIDCKMLQSL 741
             +++ ++  CK L ++
Sbjct: 850 QSIQWFYVWYCKSLHNV 866



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 158/634 (24%), Positives = 243/634 (38%), Gaps = 155/634 (24%)

Query: 500  GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLIL------LGCLNLE 553
            G SA+E +            LD+    R+   S +F K+ +L  L        +  +N  
Sbjct: 528  GTSAVESI-----------CLDMDQITRINLSSKAFTKMPNLRLLAFKYHNRDVKGINYV 576

Query: 554  HFPEILEKM-EHLKRIYSDRTPITELPSSF----------------------ENLPGLEV 590
            H PE L+ +  +L+       P+  LPS+F                      +NLP LE 
Sbjct: 577  HLPEGLDFLPNNLRSFEWSAYPLNYLPSNFSPWNLVELHLPYSNLEKLWNGTQNLPSLER 636

Query: 591  LFVE------DCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHC 643
            + +       +C K  N P+       LY I L    +IS +  S+     L  LD S C
Sbjct: 637  IDLRWSAHLIECPKFSNAPN-------LYGIDLGNCESISHVDPSIFNLPKLEWLDVSGC 689

Query: 644  KGLESFPRTFLLGLSAMGLLHISDYAVRE---IPQEIAYLS-SLEILYLSGNNFESLP-- 697
            K LES   +     S   LL    Y ++E   +PQ     S +   +Y S +  ESL   
Sbjct: 690  KSLESLYSS-TRSQSQASLLADRCYNLQEFISMPQNNNDPSITTTWIYFSSHISESLVDL 748

Query: 698  ----AIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY---LHLIDCKMLQSLP---VLPFC 747
                A   + S       + F  L  +   P C +Y   L   DC  +  +P    L   
Sbjct: 749  PENFAYNIEFSGSTMNEQDTFTTLHKVLPSP-CFRYVKSLTFYDCNNISEIPDSISLLSL 807

Query: 748  LESLDLTGCNMLRSLPELPLCL---QYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSL 804
            LESL L GC ++ SLPE   CL    +L    C ML+S+P LP  +Q   V  C   +SL
Sbjct: 808  LESLYLIGCPII-SLPESINCLPRLMFLEARYCKMLQSIPSLPQSIQWFYVWYC---KSL 863

Query: 805  PEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSL 864
              +L        S  ++  KH           KS    F   NC++L+  +   IL D++
Sbjct: 864  HNVL-------NSTNQQTKKHQN---------KST---FLLPNCIELDRHSFVSILKDAI 904

Query: 865  LRI----RHMAIASLRLGYEMAINEKL-----------SELRGSLI------VLPGSEIP 903
             RI    + +  A +    E A ++             S +  +LI      +LP     
Sbjct: 905  ARIELGAKPLLPADVLENKEEAASDNNDDDGYNDLHDDSYIWDTLIKGKICYMLPAGNFK 964

Query: 904  --DWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL------DSKKVDSDCF-------- 947
              DWF   S+ + + I+LPP     + +GF F  V       D   +  DC+        
Sbjct: 965  NGDWFHYHSTQTLVSIELPP----SDHLGFIFYLVFSQVCIGDGASLGCDCYLETTCGEC 1020

Query: 948  ---RYFYV--SFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDG 1002
               + F++  S  F+        + H+ L Y+ +  E ++++ + I              
Sbjct: 1021 ISIKSFFLRESVMFNPFFSITIRSDHLFLWYDKQCCEQIMEAIKEI-------KANDMSA 1073

Query: 1003 YHHTIATFKFFAERK----FYKIKRCGLCPVYAN 1032
             H+   TFKFFA R        IK CG   +Y++
Sbjct: 1074 IHNPKLTFKFFAARTEENMEAAIKECGFRWIYSS 1107


>gi|255561520|ref|XP_002521770.1| conserved hypothetical protein [Ricinus communis]
 gi|223538983|gb|EEF40580.1| conserved hypothetical protein [Ricinus communis]
          Length = 465

 Score =  318 bits (815), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 200/453 (44%), Positives = 268/453 (59%), Gaps = 35/453 (7%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + SSD V IVGIWGM GIGKTT+A+A+F +    F+   F ++VR  SE  G L HL+ Q
Sbjct: 22  LGSSD-VSIVGIWGMAGIGKTTIAEAVFKRNVASFDTCYFFANVREESEKHGSL-HLRTQ 79

Query: 61  MLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQ-FGQGS 117
           +LS    +       +   FT  K R+   K LIVLDDVN   Q++ L+ E    FG+GS
Sbjct: 80  LLSKICGK------AHFRRFTYRKNRLSHGKALIVLDDVNSSLQMQELLVEGRHLFGEGS 133

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           +++VT+RD++VL+    E   IY V+GL   EA + F    F +NH  E+    S+ V+ 
Sbjct: 134 KVIVTSRDRQVLKNGVDE---IYEVDGLNLNEALQLFSINCFNQNHPLEEFMQLSKRVIY 190

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y KGNPL L+VLG  L  K K  W   L  L R   S I  + ++L++S++ L    K I
Sbjct: 191 YAKGNPLALKVLGCFLLDKSKQDWEIALDKLKRT--SNI-GMKNVLRLSYDGLEIEDKEI 247

Query: 238 FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FLDIACFF+GED  FV  ILD     V   L+ L+DKSL+++S   L MHD++QEMG + 
Sbjct: 248 FLDIACFFKGEDVCFVERILDGCGFYVDIGLNNLVDKSLITVSNGKLWMHDLIQEMGWET 307

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V+QES  EPG+RSRLW  ++I  VL  N GT A+EGI LDLS+ + ++L   AF  M NL
Sbjct: 308 VQQESTGEPGERSRLWHHEDIYHVLTKNTGTKAVEGITLDLSETRELHLTSEAFKKMYNL 367

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPN-GLDYLPKKLRYLHWDTYPLRTLPSN 413
           RL KF+   F +              + KV  P+ GL +   KLRYLHW  YP ++LP N
Sbjct: 368 RLLKFHDSDFED--------------FCKVHFPDEGLSFHSNKLRYLHWYKYPSKSLPYN 413

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQN 446
           F P+NLVELNL  S VEQ W+G +     + Q+
Sbjct: 414 FSPENLVELNLPRSNVEQLWQGVQNRTKGTQQH 446


>gi|93117597|gb|ABE99701.1| TIR-NBS-LRR disease resistance-like protein [Populus balsamifera]
          Length = 1116

 Score =  318 bits (815), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 244/774 (31%), Positives = 395/774 (51%), Gaps = 102/774 (13%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           ++D V IVGI GM GIGKT++AK +F+QF + FEGSCF+S++   SE + GL  LQ+Q+L
Sbjct: 245 ATDEVCIVGIHGMPGIGKTSIAKVVFNQFCYRFEGSCFLSNINETSEQSNGLVLLQEQLL 304

Query: 63  STTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
              L +   V   N+       KER+   ++L+V+DDV    QL  L+GE   FG GSR+
Sbjct: 305 HDILKQN-TVNISNVVRGMVLIKERICHKRVLVVVDDVAHQNQLNALMGERSWFGPGSRV 363

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TT+D+ +L K      + YRV  L+ +E+ + F   AF +    +D    S  VV Y 
Sbjct: 364 IITTKDEHLLLKV----DRTYRVEELKRDESLQLFSWHAFGDTKPAKDYVELSNDVVDYC 419

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP-RVKSIF 238
            G PL LEVLGS L  K ++ W  ++  L +I   EI      L+ISF+ L   ++++ F
Sbjct: 420 GGLPLALEVLGSCLPGKNRARWKCLIDKLRKIPNREIQ---KKLRISFDSLDDHQLQNTF 476

Query: 239 LDIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQ 293
           LDIACFF G +K++VA +L+     +  D L  L ++SL+ +     ++MHD+L++MGR 
Sbjct: 477 LDIACFFIGRNKEYVAKVLEARCGYNPEDDLGTLSERSLIKVDAFGKISMHDLLRDMGRD 536

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           I+ +ES   PGKRSR+W  ++   VL  + GT+ +EG+ LD    +  +L   +FT M  
Sbjct: 537 IIHKESPGHPGKRSRIWQREDAWNVLNKHMGTEVVEGLALDARASEDKSLSTGSFTKMRF 596

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           L+L                      L  + V L      L ++L ++ W   PL++ PS+
Sbjct: 597 LKL----------------------LQINGVHLTGPFKLLSEELIWICWLECPLKSFPSD 634

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
               NLV L+++ S +++ W+ +K      +   K L                       
Sbjct: 635 LMLDNLVVLDMQYSNIKELWKEKKI-----LNKLKIL----------------------- 666

Query: 474 VTINFSYCVNLIEFPQI-SGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
              NFS+  +LI+ P + S  + +L L G S++ EV  SI  L  L +L+L+GC R+K +
Sbjct: 667 ---NFSHSKHLIKTPNLHSSSLEKLMLEGCSSLVEVHQSIGHLKSLVLLNLKGCWRIKIL 723

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
             S C ++SL +L + GC  LE  PE +  +E L  + +D             +   + L
Sbjct: 724 PESICDVKSLESLNISGCSQLEKLPERMGDIESLTELLADE------------IQNEQFL 771

Query: 592 FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLP-SSVALSNMLRSLDSSHCKGLESFP 650
           F            +IG L+++  +    S  +Q   SS +  + + +  S+    ++ F 
Sbjct: 772 F------------SIGHLKHVRKLSLRVSNFNQDSLSSTSCPSPISTWISASVLRVQPFL 819

Query: 651 RTFLLGLSAMGLLHISDYAVREIPQEIAY---LSSLEILYLSGNNFESLPAIIKQMSQLR 707
            T  +   ++  L +++Y + E      Y   LSSL+ L LSGN F SLP+ I  +++L+
Sbjct: 820 PTSFIDWRSVKRLKLANYGLSESATNCVYFGGLSSLQELNLSGNKFLSLPSGISVLTKLQ 879

Query: 708 FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS--LPVLPFCLESLDLTGCNML 759
            + +++ + L S+ ELP  L+ L+   C+ ++   LP+       L L GC  L
Sbjct: 880 HLRVQNCSNLVSISELPSSLEKLYADSCRSMKRVCLPIQSKTNPILSLEGCGNL 933


>gi|357499629|ref|XP_003620103.1| Disease resistance-like protein GS3-4 [Medicago truncatula]
 gi|355495118|gb|AES76321.1| Disease resistance-like protein GS3-4 [Medicago truncatula]
          Length = 1075

 Score =  318 bits (815), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 258/751 (34%), Positives = 373/751 (49%), Gaps = 99/751 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S+D V+++GI+G GGIGKTTLAKA+++  + +FE  CF+ +VR NS    GLEHLQK 
Sbjct: 219 VGSNDKVKMLGIYGPGGIGKTTLAKAVYNFIAGQFECVCFLHNVRENS-AKHGLEHLQKD 277

Query: 61  MLS--TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS    L  KL      IP   K+R+++ K+L++LDD+N++ QL+ + G  D FG GSR
Sbjct: 278 LLSKIVGLDIKLADTSEGIP-IIKQRLQQKKVLLILDDINKLKQLQAMAGGTDWFGAGSR 336

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           ++VTTRDK +L     E    Y  + L  +EA E     AFK               ++Y
Sbjct: 337 VIVTTRDKNLLASHGIE--VTYETHELNKKEALELLRWKAFKAKQVDSSYECILNRAINY 394

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LE+LGS+L  K    W  +L    RI   EI  I   L++SF+ L    +S+F
Sbjct: 395 AAGLPLALEILGSNLYGKHIEEWNSLLDRYERIPSEEIQKI---LRVSFDALEEDERSVF 451

Query: 239 LDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSI-SGNFLNMHDILQEMGRQ 293
           LDIAC F+G    E +D + +         + +L+ KSLV I +  F+ +HD++++MG++
Sbjct: 452 LDIACCFKGYKLKEVEDMLCAHYGQRMRYHIGVLVKKSLVKIINERFVTLHDLIEDMGKE 511

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IVRQES KEPGKRSRL   ++I +VL+ N GT  IE I LD          P+A      
Sbjct: 512 IVRQESPKEPGKRSRLSFHEDIFQVLEENSGTSQIEIIRLDFPL-------PQAIVE--- 561

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
                      ++ ++L  M   + L       P    +LP  LR L W  + LR +PS 
Sbjct: 562 -----------WKGDELKKMKNLKTLIVKTSFFPKPHVHLPDNLRVLEW--HSLRDIPSE 608

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           F PKNL    LR           K+C P+S + F  L  L    C+ LR           
Sbjct: 609 FLPKNLSICKLR-----------KSC-PTSFKMFMVLKVLHLDECKRLREIS-------- 648

Query: 474 VTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
              + S   NL EF     K  R          +  SI  L  L++L+  GC++LK  S 
Sbjct: 649 ---DVSGLQNLEEFSFQRCKKLR---------TIHDSIGFLNKLKILNAEGCRKLK--SF 694

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
              +L SL  L L  C  L +FPEIL KME+L+ I+   T I ELP+SF+NL GL  L +
Sbjct: 695 PPIQLTSLELLRLSYCYRLRNFPEILGKMENLESIFLKETSIKELPNSFQNLSGLRNLLL 754

Query: 594 EDCSKLDNLPDNIGSLEYLYYILAAASAI----SQLPSSVALSNMLRSLDSSHCKGLESF 649
           +       LP +I  +  L ++L     +       PSS+  SN+ +SL    C      
Sbjct: 755 DGFRMFLRLPSSILVMPKLSWVLVQGRHLLPKQCDKPSSMVSSNV-KSLVLIECN----- 808

Query: 650 PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
               L G S              +P    + +++  L LS +N   LP  IK++  L  +
Sbjct: 809 ----LTGES--------------LPIIFKWFANVTNLNLSKSNITILPECIKELRSLERL 850

Query: 710 HLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           +L+   +LQ +  +P  LK+L  I+C+ L S
Sbjct: 851 YLDCCKLLQEIRAIPPNLKFLSAINCESLSS 881



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 43/274 (15%)

Query: 579 PSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSL 638
           P+SF+    L+VL +++C +L  + D  G      +       +  +  S+   N L+ L
Sbjct: 624 PTSFKMFMVLKVLHLDECKRLREISDVSGLQNLEEFSFQRCKKLRTIHDSIGFLNKLKIL 683

Query: 639 DSSHCKGLESFPRTFLLGLSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSGNNFESLP 697
           ++  C+ L+SFP    + L+++ LL +S  Y +R  P+ +  + +LE ++L   + + LP
Sbjct: 684 NAEGCRKLKSFPP---IQLTSLELLRLSYCYRLRNFPEILGKMENLESIFLKETSIKELP 740

Query: 698 AIIKQMSQLRFIHLEDFNMLQSLPELPLCL-----------------------------K 728
              + +S LR + L+ F M   LP   L +                             K
Sbjct: 741 NSFQNLSGLRNLLLDGFRMFLRLPSSILVMPKLSWVLVQGRHLLPKQCDKPSSMVSSNVK 800

Query: 729 YLHLIDCKML-QSLPVLPFCLESLDLTGCNMLRS-LPELPLC------LQYLNLEDCNML 780
            L LI+C +  +SLP++       ++T  N+ +S +  LP C      L+ L L+ C +L
Sbjct: 801 SLVLIECNLTGESLPIIFKWFA--NVTNLNLSKSNITILPECIKELRSLERLYLDCCKLL 858

Query: 781 RSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL 814
           + +  +P  L+ L+  NC  L S    +L  QEL
Sbjct: 859 QEIRAIPPNLKFLSAINCESLSSSCRSMLLDQEL 892



 Score = 46.2 bits (108), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)

Query: 725 LCLKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSLPE---LPLCLQYLNLEDCNM 779
           + LK LHL +CK L+ +  +     LE      C  LR++ +       L+ LN E C  
Sbjct: 631 MVLKVLHLDECKRLREISDVSGLQNLEEFSFQRCKKLRTIHDSIGFLNKLKILNAEGCRK 690

Query: 780 LRSLPELPLC-LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLS 823
           L+S P + L  L+LL +  C RL++ PEIL  ++ L++  L++ S
Sbjct: 691 LKSFPPIQLTSLELLRLSYCYRLRNFPEILGKMENLESIFLKETS 735


>gi|147817181|emb|CAN77679.1| hypothetical protein VITISV_018104 [Vitis vinifera]
          Length = 1015

 Score =  318 bits (815), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 246/740 (33%), Positives = 347/740 (46%), Gaps = 164/740 (22%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V++VGIWGMGGIGKTTLA+A+++Q SH+FE  CF+ +V                      
Sbjct: 206 VRMVGIWGMGGIGKTTLARAVYNQISHQFEACCFJENV---------------------- 243

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
                                   LIV+DDVN    L+ LIG+   FG GSRI++TTR+K
Sbjct: 244 ------------------------LIVIDDVNNSKILEDLIGKHGWFGIGSRIIITTRNK 279

Query: 127 RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVL 186
           ++L      E  +Y V  L  + A E F  +AFK+ H  +D    S+ +V Y +G PL L
Sbjct: 280 QLLVTHGVNE--VYEVEKLNDDNAVELFSRYAFKKAHPIDDYVELSQCIVVYAQGLPLAL 337

Query: 187 EVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFE 246
            VL +                                           + IFLDIACFF+
Sbjct: 338 XVLDNE------------------------------------------RDIFLDIACFFQ 355

Query: 247 GEDKDFVASILDDSE--SDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEP 303
           G DK +V  I        D+ + +LI+KSL+S+  N L  H++LQ+MGR+IVR+ S KEP
Sbjct: 356 GHDKXYVMEIFRSCGFFPDIGIRVLIEKSLISVVENKLMXHNLLQKMGREIVREASPKEP 415

Query: 304 GKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPK 363
           GKRSRLW   +++ VL    GT+ +EGI LDLS +K IN    AF  M+ LRL K Y   
Sbjct: 416 GKRSRLWIHDDVNHVLTKXTGTEEVEGISLDLSSLKEINFTNEAFAPMNRLRLLKVYTLN 475

Query: 364 FYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELN 423
           F           + +    KV    G  +  ++LR+L+W  YPL++LP++F  KNLV+L+
Sbjct: 476 FL---------MDSKREKCKVHFSXGFKFHCEELRHLYWYEYPLKSLPNDFNLKNLVDLS 526

Query: 424 LRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVN 483
           +  S+++Q W+G K        N K+   L+                    T +FS   N
Sbjct: 527 MPYSQIKQLWKGTKVLXNLKFMNLKHSKFLT-------------------ETPDFSRVTN 567

Query: 484 LIEFPQISGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLV 542
           L           RL L G  ++ +V  S+  L  L  L L+ CK LK + +  C L+ L 
Sbjct: 568 L----------ERLVLKGCISLYKVHPSLGDLXKLNFLSLKNCKMLKSLPSCICDLKCLE 617

Query: 543 TLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNL 602
             IL GC   E  PE    +E LK   +D T I  LPSSF  L  LE+L  E C      
Sbjct: 618 XFILSGCSKFEELPENFGNLEMLKEFCADGTAIRVLPSSFSLLRNLEILSFEXCKG---- 673

Query: 603 PDNIGSLEYLYYILAAASAISQLP-SSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMG 661
                            S    LP  S   SN + S  SS             L   ++ 
Sbjct: 674 --------------PPPSTSWWLPRRSSNFSNFVLSPLSS----------LSSLKTLSLS 709

Query: 662 LLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP 721
             +ISD A  +    + +LSSLE L LS NNF +LP+ I ++  L+ + LE+   LQ+LP
Sbjct: 710 ACNISDGATLD---SLGFLSSLEDLDLSENNFVTLPSNIXRLPHLKMLGLENCKRLQALP 766

Query: 722 ELPLCLKYLHLIDCKMLQSL 741
           ELP  ++ +   +C  L+++
Sbjct: 767 ELPTSIRSIMARNCTSLETI 786



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 178/463 (38%), Gaps = 66/463 (14%)

Query: 575  ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSN 633
            +TE P  F  +  LE L ++ C  L  +  ++G L  L ++ L     +  LPS +    
Sbjct: 556  LTETPD-FSRVTNLERLVLKGCISLYKVHPSLGDLXKLNFLSLKNCKMLKSLPSCICDLK 614

Query: 634  MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF 693
             L     S C   E  P  F   L  +        A+R +P   + L +LEIL  S    
Sbjct: 615  CLEXFILSGCSKFEELPENFG-NLEMLKEFCADGTAIRVLPSSFSLLRNLEIL--SFEXC 671

Query: 694  ESLPAIIKQMSQLRFIHLEDF---NMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLES 750
            +  P         R  +  +F    +        L L   ++ D   L SL  L   LE 
Sbjct: 672  KGPPPSTSWWLPRRSSNFSNFVLSPLSSLSSLKTLSLSACNISDGATLDSLGFLS-SLED 730

Query: 751  LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
            LDL+  N + +LP              N+ R LP L    ++L + NC RLQ+LPE+   
Sbjct: 731  LDLSENNFV-TLPS-------------NIXR-LPHL----KMLGLENCKRLQALPEL--- 768

Query: 811  LQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHM 870
                                  P S++S        NC  L    +N+  +  L+ +R  
Sbjct: 769  ----------------------PTSIRSIMA----RNCTSLE-TISNQSFSSLLMTVR-- 799

Query: 871  AIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIG 930
                L+      IN     +     V  GS IPDW   QSSGS +  +LPP+    N +G
Sbjct: 800  ----LKEHIYCPINRDGLLVPALSAVXFGSRIPDWIRYQSSGSEVKAELPPNWFDSNFLG 855

Query: 931  FAFCAVLDSKKVD-SDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVIL 989
             A C V   + V  +D F  F+ S        +   +   D+     +++  ++SD + L
Sbjct: 856  LALCVVTVPRLVSLADFFGLFWRSCTL-FYSTSSHXSSSFDVYTYPNHLKGKVESDHLWL 914

Query: 990  GFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGLCPVYAN 1032
             + P  +        H  A+F+     +   IK CG+  VY N
Sbjct: 915  VYVPLPHFINWQQVTHIKASFRITTFMRLNVIKECGIGLVYVN 957


>gi|356560037|ref|XP_003548302.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1083

 Score =  318 bits (815), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 250/763 (32%), Positives = 359/763 (47%), Gaps = 119/763 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V I+GI GMGG+GKTTLA  +++  +  F+ SCF+ +VR  S    GL+HLQ  
Sbjct: 204 VGSDDLVHIIGIHGMGGLGKTTLALEVYNLIALHFDESCFLQNVREES-NKHGLKHLQSI 262

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +LS  L EK       +     I H    R++R K+L++LDDVN+  QLK ++G  D FG
Sbjct: 263 LLSKLLGEKDITLTSWQEGASTIQH----RLQRKKVLLILDDVNKREQLKAIVGRPDWFG 318

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK +L+    E ++ Y V  L    A +     AFK              
Sbjct: 319 PGSRVIITTRDKHLLKCH--EVERTYEVKVLNHNAALQLLTWNAFKREKIDPSYEDVLNR 376

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV+Y  G PL LE++GS++  K  + W   +    RI   EI    +ILK+SF+ L    
Sbjct: 377 VVTYASGLPLALEIIGSNMFGKSVAGWESAVEHYKRIPNDEI---LEILKVSFDALGEEQ 433

Query: 235 KSIFLDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEM 290
           K++FLDIA   +G    E +  + S+ D+     +D+L+DKSL+ +    + MHD++Q +
Sbjct: 434 KNVFLDIAFCLKGCKLTEVEHMLCSLYDNCMKHHIDVLVDKSLIKVKHGIVEMHDLIQVV 493

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS---KIKGINLDPRA 347
           GR+I RQ S +EPGKR RLW PK+I  VLK N GT  IE I LD S   K + +  +  A
Sbjct: 494 GREIERQRSPEEPGKRKRLWLPKDIIHVLKDNTGTSKIEIICLDFSISYKEETVEFNENA 553

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F  M NL++      KF                        G +Y P+ LR L W  YP 
Sbjct: 554 FMKMENLKILIIRNGKF----------------------SKGPNYFPEGLRVLEWHRYPS 591

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQ-PWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS 466
             LPSNF P NLV   L  S ++   + G       S +   +L+ L F  C+ L   P 
Sbjct: 592 NFLPSNFDPINLVICKLPDSSIKSFEFHG-------SSKKLGHLTVLKFDRCKFLTQIPD 644

Query: 467 NLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCK 526
                    ++F  C +L+                     V  SI  L  L+ L   GC+
Sbjct: 645 VSDLPNLRELSFEDCESLV--------------------AVDDSIGFLKKLKKLSAYGCR 684

Query: 527 RLKRISTSF--CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
           +L    TSF    L SL TL L  C +LE+FPEIL +ME+++ +      I ELP SF+N
Sbjct: 685 KL----TSFPPLNLTSLETLQLSSCSSLEYFPEILGEMENIRELRLTGLYIKELPFSFQN 740

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
           L GL +L +  C                         I QLP S+A+   L S  + +C 
Sbjct: 741 LTGLRLLALSGC------------------------GIVQLPCSLAMMPELSSFYTDYCN 776

Query: 645 GLESFPRTFLLG-----LSAMGLLHIS-------DYAVREIPQEIAYLSSLEILYLSGNN 692
             +              +S+   L  +       D+ +    +     + +  L LSGNN
Sbjct: 777 RWQWIELEEGEEKLGSIISSKAQLFCATNCNLCDDFFLAGFKR----FAHVGYLNLSGNN 832

Query: 693 FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
           F  LP   K++  LR + + D   LQ +  LP  L+Y    +C
Sbjct: 833 FTILPEFFKELQFLRTLDVSDCEHLQEIRGLPPILEYFDARNC 875



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 140/361 (38%), Gaps = 71/361 (19%)

Query: 560 EKMEHLKRIYSDRTP-ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
           +K+ HL  +  DR   +T++P    +LP L  L  EDC  L  + D+IG L+ L  +  +
Sbjct: 623 KKLGHLTVLKFDRCKFLTQIPD-VSDLPNLRELSFEDCESLVAVDDSIGFLKKLKKL--S 679

Query: 619 ASAISQLPSSVALS-NMLRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIPQE 676
           A    +L S   L+   L +L  S C  LE FP   +LG +  +  L ++   ++E+P  
Sbjct: 680 AYGCRKLTSFPPLNLTSLETLQLSSCSSLEYFPE--ILGEMENIRELRLTGLYIKELPFS 737

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCK 736
              L+ L +L LSG     LP  +  M +L   + +  N  Q +       K   +I  K
Sbjct: 738 FQNLTGLRLLALSGCGIVQLPCSLAMMPELSSFYTDYCNRWQWIELEEGEEKLGSIISSK 797

Query: 737 MLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLL--- 793
                    FC  + +L     L         + YLNL   N    LPE    LQ L   
Sbjct: 798 ------AQLFCATNCNLCDDFFLAGFKRFA-HVGYLNLSG-NNFTILPEFFKELQFLRTL 849

Query: 794 TVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNG 853
            V +C  LQ +  +   L+  DA                              NC+    
Sbjct: 850 DVSDCEHLQEIRGLPPILEYFDAR-----------------------------NCVSFTS 880

Query: 854 KANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGS 913
            + +                       M +N++L E  G+  V PG+ IP+WF  QSSG 
Sbjct: 881 SSTS-----------------------MLLNQELHEAGGTQFVFPGTRIPEWFDQQSSGP 917

Query: 914 S 914
           S
Sbjct: 918 S 918


>gi|82542047|gb|ABB82031.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1146

 Score =  318 bits (815), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 251/756 (33%), Positives = 378/756 (50%), Gaps = 114/756 (15%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           ++D V+IVG+ GM GIGKTT+A+ +F+Q  H FEGSCF+SD+   S+   GL   QKQ+L
Sbjct: 247 ATDDVRIVGVHGMPGIGKTTIAQVVFNQLCHGFEGSCFLSDINERSKQVNGLVPFQKQLL 306

Query: 63  STTLSEKLEVAGPNIPH----FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
              L  K +VA  +         KER+RR ++L+V DD+    QL  L+G+   FG  SR
Sbjct: 307 HDIL--KQDVANFDCVDRGKVLIKERLRRKRVLVVADDMAHPDQLNALMGDRSWFGPRSR 364

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTR   +L     E  + Y++  LE +EA + F   AFK+    ED    S+  V Y
Sbjct: 365 LIITTRYSSLLR----EADQTYQIKELEPDEALQLFSWHAFKDTKPAEDYIELSKKAVDY 420

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+G+ L  K K  W   + +L+RI ES I      L ISF+ L   +++ F
Sbjct: 421 CGGLPLALEVIGALLYGKEKHRWESEIDNLSRIPESNIQGK---LLISFDALDGELRNAF 477

Query: 239 LDIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           LDIACFF   +K++VA +L      +   VL+ L ++SLV + G+ + MHD+L++MGR++
Sbjct: 478 LDIACFFIDVEKEYVAKLLGARCRYNPEVVLETLRERSLVKVFGDMVTMHDLLRDMGREV 537

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V + S KEPGKR+R+W+ K+   VL+  KGTD +EG+ LD+   +  +L   +F  M  L
Sbjct: 538 VCKASPKEPGKRTRIWNQKDAWNVLEQQKGTDVVEGLALDVRASEAKSLSTGSFAKMKRL 597

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            L                      L  +   L      L K+L ++ W   P +  PS+F
Sbjct: 598 NL----------------------LQINGAHLTGSFKLLSKELMWICWLQCPSKYFPSDF 635

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
              NLV L+++ S +++ W+G+K            L+ L                     
Sbjct: 636 TLDNLVVLDMQYSNLKELWKGKKI-----------LNRLKI------------------- 665

Query: 475 TINFSYCVNLIEFPQI-SGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
            IN S+  +LI+ P + S  + +L L G S++ +V  SI  LT L  L+L GC  LK + 
Sbjct: 666 -INLSHSQHLIKTPNLHSSSLEKLILKGCSSLVDVHQSIGNLTSLVFLNLEGCWSLKILP 724

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
            S   ++SL TL + GC  LE  PE +  ME L ++ +D     +  SS           
Sbjct: 725 KSIGNVKSLETLNISGCSQLEKLPEHMGDMESLTKLLADGIENEQFLSS----------- 773

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALS----NMLRSLDSS-HCKGLE 647
                        IG L+Y+  +  +    +  PSS  +S    N  R L +S   + ++
Sbjct: 774 -------------IGQLKYVRRL--SLRGYNSAPSSSLISAGVLNWKRWLPTSFEWRSVK 818

Query: 648 SFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
           S      L LS   L   SD A   +  +   L +LE L LSGN F SLP+ I  + +L 
Sbjct: 819 S------LKLSNGSL---SDRATNCV--DFRGLFALEELDLSGNKFSSLPSGIGFLPKLG 867

Query: 708 FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPV 743
           F+ +     L S+P+LP  L+ L    CK L+ + +
Sbjct: 868 FLSVRACKYLVSIPDLPSSLRCLGASSCKSLERVRI 903


>gi|357449965|ref|XP_003595259.1| Disease resistance-like protein GS4-1 [Medicago truncatula]
 gi|355484307|gb|AES65510.1| Disease resistance-like protein GS4-1 [Medicago truncatula]
          Length = 1061

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 221/624 (35%), Positives = 324/624 (51%), Gaps = 69/624 (11%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFD-QFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           S +   IVGI+G GG+GK+TLA+A+++ Q S +F+G CF++D+R  S    GL  LQ+ +
Sbjct: 250 SDERANIVGIYGTGGVGKSTLARAVYNNQISDQFDGVCFLADIR-RSAINHGLVQLQETL 308

Query: 62  LSTTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           LS  L E+ ++   ++       K R++R K+L+VLDDV++  Q++ L G  D FG GS+
Sbjct: 309 LSDILGEE-DIRVRDVYRGISIIKRRLQRKKVLLVLDDVDKAKQIQVLAGGHDWFGSGSK 367

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I++TTRDK +L    G    +Y V  L  E++ E F   AF            S   VSY
Sbjct: 368 IIITTRDKHLL-AINGI-LSVYEVKELNHEKSLELFSWHAFINRKIDPSYRSISNRAVSY 425

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G P+ LEV+GS L  +    W   L    ++   +IH++   LK+S++ L    K IF
Sbjct: 426 AHGLPIALEVIGSHLIGQSLDVWKSSLDKYEKVLHKDIHEV---LKVSYDDLDEDDKGIF 482

Query: 239 LDIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQI 294
           LDIACF+   +  +   +L     S  + + +L DKSL+ I  N  + MHD++Q+MGR+I
Sbjct: 483 LDIACFYNSYEMSYAKEMLYLHGFSAENGIQVLTDKSLIKIDVNGCVRMHDLVQDMGREI 542

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VRQES  EPG+RSRLW   +I  VL+ N GTD IE I ++L   K ++   +AF  M NL
Sbjct: 543 VRQESSVEPGRRSRLWFDDDIIHVLEENTGTDTIEVIIINLCNDKEVHWSGKAFKKMKNL 602

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           ++      +F    K P                     LP  LR L W  YP ++LP +F
Sbjct: 603 KILIIRSARF---SKDPQK-------------------LPNSLRVLDWSGYPSQSLPGDF 640

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVP-SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
            PK L+ L+L           E + V   S++ F+ LS L F+GC+ L   PS    V  
Sbjct: 641 NPKKLMILSLH----------ESSLVSFKSLKVFESLSFLDFEGCKLLTELPSLSGLVNL 690

Query: 474 VTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
             +    C NLI                     +  S+  L  L +L  + C +LK +  
Sbjct: 691 GALCLDDCTNLIT--------------------IHRSVGFLNKLMLLSTQRCNQLKLLVP 730

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
           +   L SL +L + GC  L+ FPE+L  ME+++ +Y D+T I +LP S  NL GLE LF+
Sbjct: 731 NI-NLPSLESLDMRGCSRLKSFPEVLGVMENIRDVYLDQTSIDKLPVSIGNLVGLERLFL 789

Query: 594 EDCSKLDNLPDNIGSLEYLYYILA 617
            +C  L  LPD+I  L  L  I+ 
Sbjct: 790 RECKSLTQLPDSIRILPKLGIIMV 813



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 2/158 (1%)

Query: 510 SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY 569
           S++    L  LD  GCK L  +  S   L +L  L L  C NL      +  +  L  + 
Sbjct: 660 SLKVFESLSFLDFEGCKLLTELP-SLSGLVNLGALCLDDCTNLITIHRSVGFLNKLMLLS 718

Query: 570 SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSV 629
           + R    +L     NLP LE L +  CS+L + P+ +G +E +  +    ++I +LP S+
Sbjct: 719 TQRCNQLKLLVPNINLPSLESLDMRGCSRLKSFPEVLGVMENIRDVYLDQTSIDKLPVSI 778

Query: 630 ALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD 667
                L  L    CK L   P +  + L  +G++ + D
Sbjct: 779 GNLVGLERLFLRECKSLTQLPDSIRI-LPKLGIIMVYD 815



 Score = 40.4 bits (93), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 25/165 (15%)

Query: 674 PQEIAYLSSLEILYLSGNNFESLPA-------IIKQMSQLRFIHLEDFNMLQSLPELPLC 726
           PQ++   +SL +L  SG   +SLP        +I  + +   +  +   + +SL      
Sbjct: 616 PQKLP--NSLRVLDWSGYPSQSLPGDFNPKKLMILSLHESSLVSFKSLKVFESLS----- 668

Query: 727 LKYLHLIDCKMLQSLPVLP--FCLESLDLTGCNML----RSLPELPLCLQYLNLEDCNML 780
             +L    CK+L  LP L     L +L L  C  L    RS+  L   L  L+ + CN L
Sbjct: 669 --FLDFEGCKLLTELPSLSGLVNLGALCLDDCTNLITIHRSVGFLNK-LMLLSTQRCNQL 725

Query: 781 RSL-PELPL-CLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLS 823
           + L P + L  L+ L +R C+RL+S PE+L  ++ +    L++ S
Sbjct: 726 KLLVPNINLPSLESLDMRGCSRLKSFPEVLGVMENIRDVYLDQTS 770


>gi|307135796|gb|ADN33675.1| TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]
          Length = 1393

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 275/882 (31%), Positives = 436/882 (49%), Gaps = 133/882 (15%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVA----GP 75
            KTTLAKA++++ + +FEG CF+S+VR  S+   GL  LQ+ +L   L   L+V     G 
Sbjct: 241  KTTLAKALYNKIASQFEGCCFLSNVREASKQFNGLAQLQESLLYEILMVDLKVVNLDRGI 300

Query: 76   NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGE 135
            NI    + R+   K+LIVLDDV+++ QL+ L+G  D FG+GSRI+VTTR+K +L  F   
Sbjct: 301  NI---IRNRLCSKKVLIVLDDVDKLEQLEALVGGCDWFGKGSRIIVTTRNKHLL--FSHG 355

Query: 136  EKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
              +I+ + GL  ++A E F   AFK+N    +    S+   SY KG+PL L VLGS LC+
Sbjct: 356  FDEIHNILGLNEDKAIELFSWHAFKKNRPSSNYLDLSKRATSYCKGHPLALVVLGSFLCI 415

Query: 196  KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
            + ++ W  +L +      S   DI DIL++SF+ L  ++K IFLDI+C   GE  ++V  
Sbjct: 416  RDQAEWCSILDEFE---NSLNKDIKDILQLSFDGLEDKIKDIFLDISCLLVGEKVEYVKD 472

Query: 256  ILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
            +L     ++   + +L+D SL++I  + + MHD++++MG++IV  ES  E GKRSRLW  
Sbjct: 473  MLGACHVNLDFGVIVLMDLSLITIENDKVQMHDLIKQMGQKIVCGES-LELGKRSRLWLV 531

Query: 313  KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
            +++  VL +N GTDAI+ I LD      + ++ +AF  M NLRL                
Sbjct: 532  QDVWEVLVNNSGTDAIKAIKLDFPNPTRLGVNSQAFRKMKNLRL---------------- 575

Query: 373  MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
                  L     +    ++YLP  L+++ W  +P  TLPS F  KNLV L+L+ S ++  
Sbjct: 576  ------LIVQNARFSTKIEYLPDSLKWIKWHGFPQPTLPSCFITKNLVGLDLQYSFMKTF 629

Query: 433  WEGEKAC---------------------------------------VPSSIQNFKYLSAL 453
             +  + C                                       +  S+ +   L+ L
Sbjct: 630  GKRLEDCKRLKHVDLSHSTFLEKIPNFSAASNLEELYLINCKNLGMIDKSVFSLDKLTIL 689

Query: 454  SFKGCQSLRSFPSNLHFVCPVT-INFSYCVNLIEFPQISG--KVTRLYLGQ-SAIEEVPS 509
            +  GC +L+  P     +  +  +N S+C  L + P  S    +  LYL   + +  +  
Sbjct: 690  NLAGCSNLKKLPRGYFILRSLRYLNLSHCKKLEKIPDFSAASNLEELYLFNCTNLRMIDK 749

Query: 510  SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY 569
            S+  L  L +L+L  C  LK++ TS+ KL SL  L L  C  LE  P++           
Sbjct: 750  SVFSLHKLTILNLDVCSNLKKLPTSYYKLWSLQYLNLSYCKKLEKIPDL----------- 798

Query: 570  SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSS 628
                      S+  N   L+ L + +C+ L  + +++GSL  L  + L+  + +++LP+ 
Sbjct: 799  ----------SAASN---LQSLCLHECTNLRLIHESVGSLYKLIDMDLSGCTNLAKLPTY 845

Query: 629  VALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYL 688
            + L + LR L  S C  LESFP +    + ++  L +   A++E+P  I YL+ L  L L
Sbjct: 846  LRLKS-LRYLGLSECCKLESFP-SIAENMESLRELDMDFTAIKELPSSIGYLTQLYRLNL 903

Query: 689  SG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE------LPLC------------LKY 729
            +G  N  SLP  I  +  L  + L   +  +  P        P+C            L+Y
Sbjct: 904  TGCTNLISLPNTIYLLRNLDKLLLSGCSRFEMFPHKWDPTIQPVCSPSKMMEATSWSLEY 963

Query: 730  LHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELP-- 787
             HL+  + L S   L   L+S +++    L  L ++   L  L L + N   SLP     
Sbjct: 964  PHLLPNESLCSHFTL-LDLQSCNISNAKFLEILCDVAPFLSDLRLSE-NKFSSLPSCLHK 1021

Query: 788  -LCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPD 828
             + L  L ++NC  LQ +P +   +Q LDAS  + L++ SPD
Sbjct: 1022 FMSLWNLELKNCKFLQEIPNLPQNIQNLDASGCKSLAR-SPD 1062


>gi|82794024|gb|ABB91439.1| MRGH-J [Cucumis melo]
          Length = 1007

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 251/803 (31%), Positives = 390/803 (48%), Gaps = 125/803 (15%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D  + +GIWGMGG+GKTT+AKA+F   + EF GSC + +V+   +   GL  LQ+++LS 
Sbjct: 215 DDKRFIGIWGMGGVGKTTIAKAVFKSVAREFHGSCILENVKKTLKNVRGLVSLQEKLLSD 274

Query: 65  TLSE-KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
           TL   K+++         K+ +   K+ +VLDDV+   Q+K L G  + FG GSRI++TT
Sbjct: 275 TLMRGKVQIKDGEGVEMIKKNLGNRKVFVVLDDVDHFSQVKDLAGGEEWFGCGSRIIITT 334

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           RD+ +L     + +  Y V     EEA + FC+ AF      +         V Y +G P
Sbjct: 335 RDEGLLLSLGIDIR--YNVESFGDEEALQLFCHEAFGVKFPKKGYLDLCMPFVEYAEGLP 392

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L ++ LG SL  +    W   +  LN    S    +Y+ LKIS++ L    + IFL IAC
Sbjct: 393 LAIKALGHSLHNRLFKSWEGAIRKLN---NSLNRQVYENLKISYDALGKEERRIFLYIAC 449

Query: 244 FFEGEDKDFV---------------------ASIL--DDSESDVLDILIDKSLVSISGNF 280
           F +G+ KD V                     A +L   ++ +D L  L +KSL+++  + 
Sbjct: 450 FLKGQSKDLVIDTFVSFEIDAADGLLTRKKAADVLCIKETAADALKKLQEKSLITVVNDK 509

Query: 281 LNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG 340
           + MH++ Q++G++I R+ES +   K SRLW  ++++  L+H +G +AIE I LD ++   
Sbjct: 510 IQMHNLHQKLGQEIFREESSR---KSSRLWHREDMNHALRHKQGVEAIETIALDSNEHGE 566

Query: 341 INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYL 400
            +L+ + F+ M+ L++ + +                       V L   L+YL  KLR L
Sbjct: 567 SHLNTKFFSAMTGLKVLRVH----------------------NVFLSGDLEYLSSKLRLL 604

Query: 401 HWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW-EGEK---------------------A 438
            W  YP R LPS+F+P  L+ELNL+ S +E  W E EK                     +
Sbjct: 605 SWHGYPFRNLPSDFQPNELLELNLQNSCIENFWRETEKLDKLKVINLSNSKFLLKTPDLS 664

Query: 439 CVPS-----------------SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC 481
            VP+                 S+   K+L  L  K C+SL+S  SN+       +  S C
Sbjct: 665 TVPNLERLVLNGCIRLQELHLSVGILKHLIFLDLKDCKSLKSICSNISLESLKILILSGC 724

Query: 482 VNLIEFPQISGKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
             L  FP+I G +   T L+L  +AI ++ +SI  LT L +LDLR CK L  +  +   L
Sbjct: 725 SRLENFPEIVGNMKLLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAIGCL 784

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
            S+  L L GC  L+  P+ L  +  L+++    T I+ +P S   L  L+ L   +C  
Sbjct: 785 TSIKHLALGGCSKLDQIPDSLGNISCLEKLDVSGTSISHIPLSLRLLTNLKAL---NCKG 841

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
           L        S +  + +    S     P S          + SH  GL     T      
Sbjct: 842 L--------SRKLCHSLFPLWST----PRS----------NDSHSFGLRLI--TCFSNFH 877

Query: 659 AMGLLHISD--YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM 716
           ++ +L+ SD   A  +IP +++ LSSL  L LS N F +LP  + Q+  LR + L++ + 
Sbjct: 878 SVKVLNFSDCKLADGDIPDDLSCLSSLHFLDLSRNLFTNLPNSLGQLINLRCLVLDNCSR 937

Query: 717 LQSLPELPLCLKYLHLIDCKMLQ 739
           L+SLP+ P+ L Y+   DC  L+
Sbjct: 938 LRSLPKFPVSLLYVLARDCVSLK 960



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 160/341 (46%), Gaps = 41/341 (12%)

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
           L L  S IE      E L  L+V++L   K L + +     + +L  L+L GC+ L+   
Sbjct: 626 LNLQNSCIENFWRETEKLDKLKVINLSNSKFLLK-TPDLSTVPNLERLVLNGCIRLQELH 684

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFEN--LPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
             +  ++HL  I+ D      L S   N  L  L++L +  CS+L+N P+ +G+++ L  
Sbjct: 685 LSVGILKHL--IFLDLKDCKSLKSICSNISLESLKILILSGCSRLENFPEIVGNMKLLTE 742

Query: 615 ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAVRE 672
           +    +AI +L +S+     L  LD  +CK L + P     L  +  + L   S   + +
Sbjct: 743 LHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAIGCLTSIKHLALGGCS--KLDQ 800

Query: 673 IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM--------LQSLPE-- 722
           IP  +  +S LE L +SG +   +P  ++ ++ L+ ++ +  +         L S P   
Sbjct: 801 IPDSLGNISCLEKLDVSGTSISHIPLSLRLLTNLKALNCKGLSRKLCHSLFPLWSTPRSN 860

Query: 723 --------LPLC------LKYLHLIDCKMLQS-LPVLPFCLESL---DLTG---CNMLRS 761
                   L  C      +K L+  DCK+    +P    CL SL   DL+     N+  S
Sbjct: 861 DSHSFGLRLITCFSNFHSVKVLNFSDCKLADGDIPDDLSCLSSLHFLDLSRNLFTNLPNS 920

Query: 762 LPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQ 802
           L +L + L+ L L++C+ LRSLP+ P+ L  +  R+C  L+
Sbjct: 921 LGQL-INLRCLVLDNCSRLRSLPKFPVSLLYVLARDCVSLK 960


>gi|317415955|emb|CAR94520.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 806

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 230/653 (35%), Positives = 338/653 (51%), Gaps = 97/653 (14%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            ++ V+++GI GM GIGK+T+AKA+  +  ++F+   F+S V G       L H+++Q+ 
Sbjct: 218 GTEEVRVIGICGMPGIGKSTIAKALSQRIRNQFDAFSFISKV-GEISRKKSLFHIKEQLC 276

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIG-----ELD-QFGQG 116
              L+  ++V   N+    ++R+   ++LIVLD+V E+ Q+  + G     EL  +FG+G
Sbjct: 277 DHLLN--MQVTTKNVDDVIRKRLCNKRVLIVLDNVEELEQIDAVAGNDGADELSSRFGKG 334

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           S+I++TT  +R+L  +     KIY +  L  +E+   FC  AFK++H  +         +
Sbjct: 335 SKIIITTACERLLINYN---PKIYTIEKLTQDESLLLFCRKAFKKDHPMDGYEKLCYEFL 391

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL-TPRVK 235
            Y  G PL LEV G+SL  +    W   L  L     S  + I + LK SF+ L     +
Sbjct: 392 DYVDGLPLALEVFGNSLLNRSVEDWSSRLASLKDDNYSGKNKIVNYLKESFDGLENQEQR 451

Query: 236 SIFLDIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
            IFLDIACFF+GED   V +I +         L+IL +K LVSI G  L MH++LQ+MGR
Sbjct: 452 EIFLDIACFFKGEDACRVENIFESCGYYPGINLNILCEKYLVSIVGGKLWMHNLLQQMGR 511

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           ++VR ES+KE G RSRLW   E   VLK NKGTDA++GIFL L     ++L    F+NM 
Sbjct: 512 EVVRGESKKE-GARSRLWLHTEAIHVLKGNKGTDAVQGIFLSLPHPDKVHLKKDPFSNMD 570

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NLRL K Y                       V+    L+YL  +L +L W  YPL++LPS
Sbjct: 571 NLRLLKIY----------------------NVEFSGCLEYLSDELSFLEWHKYPLKSLPS 608

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           +F+P  LVELNL  S++EQ WE     +   ++                           
Sbjct: 609 SFEPDKLVELNLSESEIEQLWEE----IERPLEKL------------------------- 639

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
            + +N S C  LI+ P                ++VP       +LE L L+GC  L  + 
Sbjct: 640 -LILNLSDCQKLIKIPDF--------------DKVP-------NLEQLILKGCTSLSEVP 677

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
                LRSL   IL GC  LE  PEI E M+ L++++ D T I ELP+S E+L GL +L 
Sbjct: 678 -DIINLRSLTNFILSGCSKLEKLPEIGEDMKQLRKLHLDGTAIEELPTSIEHLSGLTLLD 736

Query: 593 VEDCSKLDNLP----DNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
           + DC  L +LP    D++ SL+ L   L+  S + +LP ++     L+ LD+S
Sbjct: 737 LRDCKNLLSLPDVLCDSLTSLQVLN--LSGCSNLDKLPDNLGSLECLQELDAS 787



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 27/200 (13%)

Query: 493 KVTRLYLGQSAIEEVPSSIE-CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
           K+  L L +S IE++   IE  L  L +L+L  C++L +I   F K+ +L  LIL GC +
Sbjct: 614 KLVELNLSESEIEQLWEEIERPLEKLLILNLSDCQKLIKIP-DFDKVPNLEQLILKGCTS 672

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
           L   P+I+                        NL  L    +  CSKL+ LP+    ++ 
Sbjct: 673 LSEVPDII------------------------NLRSLTNFILSGCSKLEKLPEIGEDMKQ 708

Query: 612 LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-V 670
           L  +    +AI +LP+S+   + L  LD   CK L S P      L+++ +L++S  + +
Sbjct: 709 LRKLHLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVLCDSLTSLQVLNLSGCSNL 768

Query: 671 REIPQEIAYLSSLEILYLSG 690
            ++P  +  L  L+ L  SG
Sbjct: 769 DKLPDNLGSLECLQELDASG 788



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 125/299 (41%), Gaps = 73/299 (24%)

Query: 545 ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
           +L G    +    I   + H  +++  + P     S+ +NL  L++  VE    L+ L D
Sbjct: 536 VLKGNKGTDAVQGIFLSLPHPDKVHLKKDPF----SNMDNLRLLKIYNVEFSGCLEYLSD 591

Query: 605 NIGSLEYLYYILAAASAISQLPSSVALSNMLR-SLDSSHCKGL-----ESFPRTFLLGLS 658
            +  LE+  Y L +      LPSS     ++  +L  S  + L         +  +L LS
Sbjct: 592 ELSFLEWHKYPLKS------LPSSFEPDKLVELNLSESEIEQLWEEIERPLEKLLILNLS 645

Query: 659 -AMGLLHISDY---------------AVREIPQEIAYLSSLEILYLSG-NNFESLPAIIK 701
               L+ I D+               ++ E+P +I  L SL    LSG +  E LP I +
Sbjct: 646 DCQKLIKIPDFDKVPNLEQLILKGCTSLSEVP-DIINLRSLTNFILSGCSKLEKLPEIGE 704

Query: 702 QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRS 761
            M QLR +HL+      ++ ELP  +++L                 L  LDL  C  L S
Sbjct: 705 DMKQLRKLHLDG----TAIEELPTSIEHLS---------------GLTLLDLRDCKNLLS 745

Query: 762 LPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPE---ILLCLQELDAS 817
           LP++           C+ L SL       Q+L +  C+ L  LP+    L CLQELDAS
Sbjct: 746 LPDVL----------CDSLTSL-------QVLNLSGCSNLDKLPDNLGSLECLQELDAS 787



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 61/217 (28%)

Query: 572 RTPITELPSSFEN-----------------------LPGLEVLFVEDCSKLDNLPD--NI 606
           + P+  LPSSFE                        L  L +L + DC KL  +PD   +
Sbjct: 600 KYPLKSLPSSFEPDKLVELNLSESEIEQLWEEIERPLEKLLILNLSDCQKLIKIPDFDKV 659

Query: 607 GSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHIS 666
            +LE L  IL   +++S++P  + L + L +   S C  LE  P                
Sbjct: 660 PNLEQL--ILKGCTSLSEVPDIINLRS-LTNFILSGCSKLEKLP---------------- 700

Query: 667 DYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC 726
                EI +++  L  L   +L G   E LP  I+ +S L  + L D   L SLP++ LC
Sbjct: 701 -----EIGEDMKQLRKL---HLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDV-LC 751

Query: 727 -----LKYLHLIDCKMLQSLP---VLPFCLESLDLTG 755
                L+ L+L  C  L  LP       CL+ LD +G
Sbjct: 752 DSLTSLQVLNLSGCSNLDKLPDNLGSLECLQELDASG 788


>gi|186478922|ref|NP_174037.3| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
 gi|332192668|gb|AEE30789.1| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
          Length = 1384

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 307/1076 (28%), Positives = 485/1076 (45%), Gaps = 159/1076 (14%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            +SS  VQ++G++GMGGIGKTTLAKA +++    FE   F+SD+R  S    GL  LQK +
Sbjct: 206  ESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFEQRAFISDIRERSSAENGLVTLQKTL 265

Query: 62   LSTTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            +        E+   +I     K  V   K+++VLDDV+ + Q+  L+GE   +GQG+ IV
Sbjct: 266  IKELFRLVPEIEDVSIGLEKIKANVHEKKIIVVLDDVDHIDQVHALVGETRWYGQGTLIV 325

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            +TTRD  +L K    ++  Y V  L   +A + F   + ++    ++L   S+ +V  + 
Sbjct: 326  ITTRDSEILSKLSVNQQ--YEVKCLTEPQALKLFSYHSLRKEEPTKNLLALSKKIVQISG 383

Query: 181  GNPLVLEVLGSSLCLKRKSH-WGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
              PL +EV GS L  K++   W      L+++ +++  ++ D+L++SF  L    K +FL
Sbjct: 384  LLPLAVEVFGSLLYDKKEEKDWQT---QLDKLKKTQPGNLQDVLELSFKSLDDEEKKVFL 440

Query: 240  DIACFFEGED--KDFVASILDD---SESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQ 293
            DIAC F   +  KD V  +L     +    L +L  KSLV I  N  L MHD +++MGRQ
Sbjct: 441  DIACLFLKMEIKKDEVVIVLKGCGLNAEAALSVLRQKSLVKILANDTLWMHDQIRDMGRQ 500

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS- 352
            +V +ES ++PG RSRLWD  EI  VL + KGT +I GI LD    K    DP A   +S 
Sbjct: 501  MVLKESREDPGLRSRLWDRGEIMTVLNNMKGTSSIRGIVLDFK--KKFARDPTADEIVSR 558

Query: 353  NLR---------------LFKFYV---PKFYEI----EKLPSMSTEEQLSYSKVQLPNGL 390
            NLR               L +F     PK  EI    E    M+    L  + V+L   L
Sbjct: 559  NLRNNPGIYSVFNYLKNKLVRFPAEEKPKSSEITIPVESFAPMTKLRLLQINNVELEGNL 618

Query: 391  DYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE-------------K 437
              LP +L+++ W   PL  LP +F  + L  L+L  S + Q                  +
Sbjct: 619  KLLPSELKWIQWKGCPLENLPPDFLARQLSVLDLSESGIRQVQTLRNKMVDENLKVVILR 678

Query: 438  AC----------------------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLH 469
             C                            VP S+ N + L  L F+ C  L  F  ++ 
Sbjct: 679  GCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVS 738

Query: 470  FVCPVTINF-SYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
             +  +   F S C +L   P+  G +T    L L  +AI+ +P SI  L +LE+L LRGC
Sbjct: 739  GLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC 798

Query: 526  K----------------------RLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKME 563
            K                       LK + +S   L++L  L L+ C +L   P+ + +++
Sbjct: 799  KIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELK 858

Query: 564  HLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAIS 623
             LK+++ + + + ELP    +LP L      DC  L  +P +IG L  L  +  +++ I 
Sbjct: 859  SLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIE 918

Query: 624  QLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSL 683
             LP  +   + +R L+  +CK L+  P++ +  +  +  L++    + E+P+E   L  L
Sbjct: 919  ALPEEIGALHFIRELELRNCKFLKFLPKS-IGDMDTLYSLNLEGSNIEELPEEFGKLEKL 977

Query: 684  EILYLSG-NNFESLPAIIKQMSQLRFIHL---------EDFNMLQSLPELPLCLKYLHLI 733
              L +S     + LP     +  L  +++         E F  L +L  L +  K L  I
Sbjct: 978  VELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRI 1037

Query: 734  DCKMLQSLPVLP------------FCLESLDLTGCNMLRSLP---ELPLCLQYLNLEDCN 778
                +      P              LE LD     +   +P   E   CL  LNL + N
Sbjct: 1038 SESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLGN-N 1096

Query: 779  MLRSLPELPL---CLQLLTVRNCNRLQSLPEILLCLQELDAS---VLEKLSKHSPDLQWA 832
               SLP   +    LQ L++R+C  L+ LP +   L++L+ +    LE +S    DL   
Sbjct: 1097 YFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVS----DL--- 1149

Query: 833  PESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRG 892
              S  +       TNC K+          + L  ++ + +      Y +A+ ++LS+   
Sbjct: 1150 --SELTILTDLNLTNCAKVVDIPG----LEHLTALKRLYMTGCNSNYSLAVKKRLSKASL 1203

Query: 893  SL---IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSD 945
             +   + LPG+ +PDWFS       +     P+   R +I  A    L+ +  D D
Sbjct: 1204 KMMRNLSLPGNRVPDWFSQ----GPVTFSAQPNRELRGVI-IAVVVALNDETEDDD 1254


>gi|357485385|ref|XP_003612980.1| NBS resistance protein [Medicago truncatula]
 gi|355514315|gb|AES95938.1| NBS resistance protein [Medicago truncatula]
          Length = 996

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 230/597 (38%), Positives = 327/597 (54%), Gaps = 60/597 (10%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG--GLEHLQKQM 61
           S+ V+++GIWGMGGIGKTT+A+ IF+Q   E+EG CF++ V   SE  G  G+  L++++
Sbjct: 363 SEKVRVIGIWGMGGIGKTTIAEEIFNQICSEYEGCCFLAKV---SEELGRHGIAFLKEKL 419

Query: 62  LSTTLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           +ST L+E +++   N +P + + R+  MK+LIVLDDV E GQL+ L G LD F   SRI+
Sbjct: 420 VSTLLAEDVKIDSSNGLPSYIQRRIGHMKVLIVLDDVTEEGQLEMLFGTLDWFRSDSRII 479

Query: 121 VTTRDKRVL-EKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           +TTRDK+VL      ++  +Y V  L+  EA   F   AFK++H   +    S+ VV Y 
Sbjct: 480 ITTRDKQVLIANEVVDDDALYEVRVLDSSEALALFNLNAFKQSHLENEFYDVSKRVVDYA 539

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           KG PLVL+VL   L  K K  W   L  L R+    I  ++D++++SF+ L    +  FL
Sbjct: 540 KGIPLVLKVLAHMLRGKNKELWESQLDKLKRL---PIQKVHDVMRLSFDDLDRLEQKYFL 596

Query: 240 DIACFFEGED--KDFVASILDDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEMG 291
           DIACFF G     +++  +L D ESD      L+ L DK+L++IS  N ++MHDILQEMG
Sbjct: 597 DIACFFNGMSLKVEYMKLLLKDYESDNSVAIGLERLKDKALITISKDNVISMHDILQEMG 656

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R++VRQES ++P K SRLWDP  I  VLK++KGTDAI  I +DLS I+ + L P  F  M
Sbjct: 657 REVVRQESSEDPRKCSRLWDPDIIYDVLKNDKGTDAIRSISVDLSAIRKLKLSPPVFDKM 716

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
           +NL+        F++I+ L              +LP GL + P  LRYL+W  YPL++ P
Sbjct: 717 TNLKFL-----YFHDIDGLD-------------RLPQGLQFFPTDLRYLYWMHYPLKSFP 758

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACV----------------PS-------SIQNFK 448
             F   NLV L L  S VE+ W G +  V                P         + N +
Sbjct: 759 EKFSVDNLVILGLPYSLVEKLWCGVQDLVNLKQVTLCHSKYLKELPDFSNATNLKVLNMR 818

Query: 449 YLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVP 508
           + + L    C SL +F  N H      +N  +C NL +F      +  L L   +I+ +P
Sbjct: 819 WCNRLIDNFCFSLATFTRNSHLTSLKYLNLGFCKNLSKFSVTLENIVELDLSCCSIKALP 878

Query: 509 SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHL 565
           SS  C + LEVL L G K ++ I +S   L     L +  C  L   P +   +E L
Sbjct: 879 SSFGCQSKLEVLVLLGTK-IESIPSSIINLTRRRVLDIQFCSKLLAVPVLPSSLETL 934



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 23/171 (13%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           + ELP  F N   L+VL +  C++L         ++   + LA  +  S L S       
Sbjct: 800 LKELPD-FSNATNLKVLNMRWCNRL---------IDNFCFSLATFTRNSHLTS------- 842

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFE 694
           L+ L+   CK L  F  T    L  +  L +S  +++ +P      S LE+L L G   E
Sbjct: 843 LKYLNLGFCKNLSKFSVT----LENIVELDLSCCSIKALPSSFGCQSKLEVLVLLGTKIE 898

Query: 695 SLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP 745
           S+P+ I  +++ R + ++  + L ++P LP  L+ L +++CK L+S+ V P
Sbjct: 899 SIPSSIINLTRRRVLDIQFCSKLLAVPVLPSSLETL-IVECKSLKSV-VFP 947


>gi|359486100|ref|XP_002274578.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1535

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 300/1090 (27%), Positives = 475/1090 (43%), Gaps = 204/1090 (18%)

Query: 89   KLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFE 148
            ++ +VLDDV++  QL+ L+G  +  G+GSR++VTTR+K VL     E   +Y V GL FE
Sbjct: 417  RVFMVLDDVDDPSQLEYLLGHREWLGEGSRVIVTTRNKHVLAV--QEVDDLYEVKGLNFE 474

Query: 149  EAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDL 208
            EA E F  +AFK+N    D    S  VV Y +G PL L+VLGS L  K    W   L  L
Sbjct: 475  EACELFSLYAFKQNLPKSDYRNLSHRVVGYCQGLPLALKVLGSLLFKKTIPQWESELRKL 534

Query: 209  NRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD--DSESDV-L 265
            +R  E+ IH +   L+ S++ L    ++IFLD+ACFF+GED+DFV+ ILD  D  +++ +
Sbjct: 535  DREPEAGIHKV---LRRSYDGLDRTEQNIFLDVACFFKGEDRDFVSRILDACDFPAEIGI 591

Query: 266  DILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGT 325
              L DK L+++  N + MHD++Q MG +IVR++   EP + SRLWDP +I + L+ +K  
Sbjct: 592  KNLNDKCLITLPYNRIAMHDLIQHMGCEIVREKFPDEPNQWSRLWDPHDIQQALRTSKEI 651

Query: 326  DAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQ 385
               + I LDLSK+K +  D   F  M++LRL K +   +Y                    
Sbjct: 652  PKAQTISLDLSKLKRVCFDSNVFAKMTSLRLLKVHSGVYYH------------------- 692

Query: 386  LPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK-------- 437
                           H++ +    LPSNF  + LVEL+L+CS ++Q W+G K        
Sbjct: 693  ---------------HFEDF----LPSNFDGEKLVELHLKCSNIKQLWQGHKDLERLKVI 733

Query: 438  --------------------------ACVP-----SSIQNFKYLSALSFKGCQSLRSFPS 466
                                       CV       S+ N K L+ LS + C  L++ P 
Sbjct: 734  DLSCSRNLIQMSEFSSMPNLERLILEGCVSLIDIHPSVGNMKKLTTLSLRFCDQLKNLPD 793

Query: 467  NLHFVCPV-TINFSYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIECLTDLEVLDL 522
            ++ ++  + +++ S C   ++FP+  G +    +L L  +AI+++P SI  L  LE L+L
Sbjct: 794  SIGYLESLESLDLSDCSKFVKFPEKGGNMKSLMKLDLRFTAIKDLPDSIGDLESLESLNL 853

Query: 523  RGCKR-----------------------LKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
              C +                       +K +  S   L SL+ L L GC   E FPE  
Sbjct: 854  SFCSKFEKFPEKGGNMKSLRHLCLRNTAIKDLPDSIGDLESLMFLNLSGCSKFEKFPEKG 913

Query: 560  EKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAA 619
              M+ L  +    T I +LP S  +L  L +L +  CSK +  P+  G+++ L  +    
Sbjct: 914  GNMKSLMELDLRYTAIKDLPDSIGDLESLRLLDLSGCSKFEKFPEKGGNMKSLVELDLKN 973

Query: 620  SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI-- 677
            +AI  LP S+     L SLD S C   E FP      + ++  L++++ A++++P  I  
Sbjct: 974  TAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKG-GNMKSLKWLYLTNTAIKDLPDSIGD 1032

Query: 678  ----------------------AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN 715
                                    + SL  L L     + LP  I  +  LR + L D +
Sbjct: 1033 LESLLSLHLSDCSKFEKFPEKGGNMKSLMKLDLRYTAIKDLPDSIGDLESLRLLDLSDCS 1092

Query: 716  MLQSLPELPLCLKYLH--LIDCKMLQSLPVLPF---CLESLDLTGCNMLRSLPE------ 764
              +  PE    +K L    +    ++ LP        LESLDL+ C+     PE      
Sbjct: 1093 KFEKFPEKGGNMKSLKKLFLRNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMK 1152

Query: 765  --------------LP------LCLQYLNLEDCNMLRSLPELPLCLQ---LLTVRNCNRL 801
                          LP        L++L L DC+     PE    ++    L ++N   +
Sbjct: 1153 SLMDLDLTNTAIKDLPDSIGDLESLKFLVLSDCSKFEKFPEKGGNMKSLIHLDLKN-TAI 1211

Query: 802  QSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC----FEFTNCLKLNGKANN 857
            + LP  +  L+ L+  +L   S    DL W  E L S  +C       + C K+ G+   
Sbjct: 1212 KDLPTNISRLKNLERLMLGGCS----DL-W--EGLISNQLCNLQKLNISQC-KMAGQI-- 1261

Query: 858  KILADSLLRIRHMAIAS----------LRLGYEMAINEKLSELRGSLIVLPGSEIPDWFS 907
             +L  SL  I      S            L +  +  E+L   +   ++   + IP+W  
Sbjct: 1262 LVLPSSLQEIDAYPCTSKEDLSGLLWLCHLNWLKSTTEELKCWKLGAVIPESNGIPEWIR 1321

Query: 908  NQSSGSSICIQLPPH-SSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSET 966
             Q+ GS +  +LP +     + +GF    V            Y ++  + +L        
Sbjct: 1322 YQNMGSEVTTELPTNWYEDPDFLGFVVSCVYRHIPTSDFDEPYLFLECELNLHGNGFEFK 1381

Query: 967  KHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGL 1026
                 GY+  + +DL+    V +   P   +  P  +HH         E     IK+CG+
Sbjct: 1382 DECCHGYSCDF-KDLM----VWVWCYP--KIAIPKEHHHKYTHINASFESYLINIKKCGI 1434

Query: 1027 CPVYANPSET 1036
              ++A   + 
Sbjct: 1435 NLIFAGDQQN 1444


>gi|359493549|ref|XP_002268091.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 927

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 257/743 (34%), Positives = 382/743 (51%), Gaps = 90/743 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT++KAI++  S +F+G  F+ +V G  E           +L    +   ++    +P 
Sbjct: 231 KTTISKAIYNDISSQFDGCSFLGNVGGKCEDG---------LLKLQKTLLQDIVKCKVPK 281

Query: 80  FT---------KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLE 130
           F          KER+R  ++LIVLDDV+   QL+ L G+   +G  S I++TT+DK +L+
Sbjct: 282 FNNISQGINVIKERLRSKRVLIVLDDVDNYMQLENLAGKHGWYGAKSIIIITTKDKHLLD 341

Query: 131 KFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLG 190
           +   E K +Y V  L  E++ E F  +AFK+N         S SVV YT G P+ L+VLG
Sbjct: 342 QH--EVKALYEVQKLNHEKSVELFNWWAFKQNTPKTGFESLSNSVVEYTHGLPVALKVLG 399

Query: 191 SSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDK 250
             L  K  + W   LH + +I + EI  + ++LK+S++KL    + IFLDIACFF G+DK
Sbjct: 400 GFLYEKSINEWESELHKVKKIPD-EI--VQNVLKVSYDKLDHTCQEIFLDIACFFRGKDK 456

Query: 251 DFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLW 310
           DFV+ IL       + +L DK L++IS N L+MHD++Q+MG++IVRQE  KEPG RSRLW
Sbjct: 457 DFVSRILGSYAMMGIKVLNDKCLLTISENKLDMHDLVQQMGQEIVRQECLKEPGNRSRLW 516

Query: 311 DPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
           D  ++  VL  N GT AIEG+F+  S    I+ +  +FT ++ LRL K Y P  ++    
Sbjct: 517 DCNDVDSVLTRNTGTQAIEGLFVQGSLASQISTN--SFTKLNRLRLLKVYYPHMWK---- 570

Query: 371 PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
                         +    LD+   +LRY H+  YPL +LP+NF  KNLVELNL+ S ++
Sbjct: 571 -----------KDFKALKNLDFPYFELRYFHFKGYPLESLPTNFHAKNLVELNLKHSSIK 619

Query: 431 QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
           Q W+G +      + N K                           IN SY   L+E    
Sbjct: 620 QLWQGNEI-----LDNLK--------------------------VINLSYSEKLVEISDF 648

Query: 491 SGKVTRL-YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
           S +VT L  L    IEE+PSSI  L  L+ L+L+ C  L  +  S C  R+L  L +  C
Sbjct: 649 S-RVTNLEILILKGIEELPSSIGRLKALKHLNLKCCAELVSLPDSIC--RALKKLDVQKC 705

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL---------FVEDCSKLD 600
             LE     L     L      +  I    +  +N    EVL          VE CS+ D
Sbjct: 706 PKLERVEVNLVGSLDLTCCILKQRVIWWSNNLLQNEVEGEVLNHYVLSLSSLVESCSR-D 764

Query: 601 NLPDNIGSLEYLYYILAAASAIS-QLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSA 659
               ++ +LE L   +   S I  ++ S +   + L+S+   +C  +E    + +  LS+
Sbjct: 765 YRGFHLSALEVLS--VGNFSPIQRRILSDIFRQSSLKSVCLRNCNLMEEGVPSDIWNLSS 822

Query: 660 MGLLHISDYAVR--EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNML 717
           +  L +S+ ++   EI   I ++SSL+ L L GN+F S+PA I Q+S+LR + L     L
Sbjct: 823 LVNLSLSNCSLTEGEILNHICHVSSLQNLSLDGNHFSSIPANIIQLSKLRTLGLYHCQKL 882

Query: 718 QSLPELPLCLKYLHLIDCKMLQS 740
             +PELP  L+ L + DC  L++
Sbjct: 883 LQIPELPPSLRALDVHDCPCLET 905


>gi|224121242|ref|XP_002318534.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222859207|gb|EEE96754.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1360

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 275/874 (31%), Positives = 411/874 (47%), Gaps = 126/874 (14%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            D S+ VQ++G++GMGGIGKTTLA A+F++    FE  CF+S+++  S+  GGL  LQ ++
Sbjct: 204  DKSNRVQVLGLYGMGGIGKTTLATALFNKLVGHFESRCFISNIKDISQEDGGLVTLQNKL 263

Query: 62   LSTTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            L     ++  V   N      KE     ++L+VLDDV++V QL  L G+ D FG+GSR++
Sbjct: 264  LGDLFPDRPPVNDINDGIAVIKELCHEKRVLVVLDDVDDVNQLNVLAGKRDWFGEGSRVI 323

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            VTTR++ VL +    E   Y V  L   EA + F   A + ++  E+    S+ +VS T 
Sbjct: 324  VTTRNRDVLVEHLVNE--FYEVRELGSSEALKLFSYHALRRDNPTEEYLNISKEIVSLTG 381

Query: 181  GNPLVLEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            G PL LEV GS+L  +R    W  VL  L  I      ++ D+L+ISF+ L    K +FL
Sbjct: 382  GLPLALEVFGSTLFNERGIKKWEDVLKKLREI---RPGNLQDVLRISFDGLDDEEKCVFL 438

Query: 240  DIACFF------EGEDKDFVASILDDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGR 292
            DIAC F        E  D +      +E+  + +L  K L+ I G++ L MHD L++MGR
Sbjct: 439  DIACLFIKMRMKREEAIDILNGCGFRAET-AITVLTVKCLIKIGGDYELWMHDQLRDMGR 497

Query: 293  QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK-----------IKGI 341
            QIVR E+  +PG RSRLWD  +I  +LKH KGT  ++G+ LD  K           +K +
Sbjct: 498  QIVRDENLLDPGMRSRLWDRGDIMTMLKHKKGTRHVQGLILDFEKKNYVRTQKISWVKAL 557

Query: 342  NLDPRAFTNMSNLRLFKFYVPKFYEI----EKLPSMSTEEQLSYSKVQLPNGLDYLPKKL 397
            N        +   +LF     +  E+    E L S+     L  +  ++       P  L
Sbjct: 558  NPSSSLDYLIEKCKLFLQLRAEEGELILDTEALKSLVNLRLLQINHAKVKGKFKSFPASL 617

Query: 398  RYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNF---------- 447
            ++L W   PL+ LPS++ P  L  L+L  S +++ W   +  V  ++             
Sbjct: 618  KWLQWKNCPLKKLPSDYAPHELAVLDLSESGIQRVWGWTRNKVAENLMVMNLRRCYNLEA 677

Query: 448  -------KYLSALSFKGCQSLRSFPSNLHFV-CPVTINFSYCVNLIEFPQISGKVTRLYL 499
                   K L  L FKGC  L     +L  V   + +N   C+NL+EFP+          
Sbjct: 678  SPDLSGCKKLEKLDFKGCIQLTKIHESLGNVRTLLQLNLDKCINLVEFPR---------- 727

Query: 500  GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
                                 D+ G             LR L  LIL  CL LE  P+ +
Sbjct: 728  ---------------------DVSG-------------LRLLQNLILSSCLKLEELPQDI 753

Query: 560  EKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAA 619
              M  LK +  D T I+ LP S   L  LE L + DC  +  LP+ +G+L  L  +    
Sbjct: 754  GSMNSLKELVVDETAISMLPQSLYRLTKLEKLSLNDCKFIKRLPERLGNLISLKELSLNH 813

Query: 620  SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
            SA+ +LP S+   + L  L    C+ L + P + +  L ++  + I+  A++E+P  I  
Sbjct: 814  SAVEELPDSIGSLSNLEKLSLMRCQSLTTIPES-IRNLQSLMEVSITSSAIKELPAAIGS 872

Query: 680  LSSLEILYLSGNNFES-LPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
            L  L+ L+  G +F S LP  I  ++ +  + L+      S+ ELP  ++ L +I     
Sbjct: 873  LPYLKTLFAGGCHFLSKLPDSIGGLASISELELDG----TSISELPEQIRGLKMI----- 923

Query: 739  QSLPVLPFCLESLDLTGCNMLRSLPEL---PLCLQYLNLEDCNMLRSLPELPLC------ 789
                      E L L  C  LR LPE     L L  +NL  CN    + ELP        
Sbjct: 924  ----------EKLYLRKCTSLRELPEAIGNILNLTTINLFGCN----ITELPESFGRLEN 969

Query: 790  LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLS 823
            L +L +  C RL  LP  +  L+ L   ++EK +
Sbjct: 970  LVMLNLDECKRLHKLPVSIGNLKSLCHLLMEKTA 1003



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 223/471 (47%), Gaps = 48/471 (10%)

Query: 332  FLDLSKIKGINLD--PRAFTNMSNLRLFK-FYVPKFYEIEKLP----SMSTEEQLSYSKV 384
             L L+  K INL   PR   ++S LRL +   +    ++E+LP    SM++ ++L   + 
Sbjct: 711  LLQLNLDKCINLVEFPR---DVSGLRLLQNLILSSCLKLEELPQDIGSMNSLKELVVDET 767

Query: 385  ---QLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV---ELNLRCSKVEQPWEGEKA 438
                LP  L  L K  +    D   ++ LP      NL+   EL+L  S VE+       
Sbjct: 768  AISMLPQSLYRLTKLEKLSLNDCKFIKRLPERLG--NLISLKELSLNHSAVEE------- 818

Query: 439  CVPSSIQNFKYLSALSFKGCQSLRSFPS---NLHFVCPVTINFSYCVNLIEFPQISGKV- 494
             +P SI +   L  LS   CQSL + P    NL  +  V+I  S    + E P   G + 
Sbjct: 819  -LPDSIGSLSNLEKLSLMRCQSLTTIPESIRNLQSLMEVSITSSA---IKELPAAIGSLP 874

Query: 495  ---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
               T    G   + ++P SI  L  +  L+L G   +  +      L+ +  L L  C +
Sbjct: 875  YLKTLFAGGCHFLSKLPDSIGGLASISELELDGTS-ISELPEQIRGLKMIEKLYLRKCTS 933

Query: 552  LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
            L   PE +  + +L  I      ITELP SF  L  L +L +++C +L  LP +IG+L+ 
Sbjct: 934  LRELPEAIGNILNLTTINLFGCNITELPESFGRLENLVMLNLDECKRLHKLPVSIGNLKS 993

Query: 612  LYYILAAASAISQLPSSVA--LSNMLRSLDSSHCKGLESFPRTFLL--GLSAMGLLH-IS 666
            L ++L   +A++ LP +     S M+  +     + L +  +  +L    S + LL  ++
Sbjct: 994  LCHLLMEKTAVTVLPENFGNLSSLMILKMQKDPLEYLRTQEQLVVLPNSFSKLSLLEELN 1053

Query: 667  DYAVR---EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL 723
              A R   ++P +   LSSL+IL L  NNF SLP+ +  +S LR + L     L+SLP L
Sbjct: 1054 ARAWRISGKLPDDFEKLSSLDILDLGHNNFSSLPSSLCGLSLLRKLLLPHCEELKSLPPL 1113

Query: 724  PLCLKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSLPELPLCLQYL 772
            P  L+ L + +C  L+++  +     L  L++T C  +  +P +  CL++L
Sbjct: 1114 PPSLEELDVSNCFGLETISDVSGLERLTLLNITNCEKVVDIPGIG-CLKFL 1163


>gi|105922434|gb|ABF81416.1| NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 925

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 218/629 (34%), Positives = 330/629 (52%), Gaps = 68/629 (10%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNIP 78
           KTT+A+ ++D+    FEGSCF+++VR       G   LQK++LS  L E+ + +   +  
Sbjct: 62  KTTVARVLYDRIRRRFEGSCFLANVREAFAEKDGPRSLQKKLLSDILMERDINICDSSTG 121

Query: 79  -HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
               K++++R+K+L+VLDDVN+  QL+ L  E   FG GSRI++T+RD  VL     ++ 
Sbjct: 122 IEMIKQKLQRIKILVVLDDVNDRKQLEYLAKEPGWFGPGSRIIITSRDTNVL--IGNDDT 179

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           KIY    L  ++A   F   AFK +   E     S+ VV Y  G PL  EV+GS L  + 
Sbjct: 180 KIYEAEKLNDDDALMLFSQKAFKNDQPAEGFVELSKQVVDYANGLPLAHEVIGSFLYERS 239

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W   ++ +N I + +I    D+L++SF+ L    K IFLDIACF +G  KD +  IL
Sbjct: 240 IPEWRGAINRMNEIPDGKI---IDVLRVSFDGLHESDKKIFLDIACFLKGFKKDRITRIL 296

Query: 258 DDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
           +         + +LI++SL+S+S + + MHD+LQ MG++IVR ES +EPG+RSRLW  ++
Sbjct: 297 ESRGFHAGIGIPVLIERSLISVSRDQVWMHDLLQIMGKEIVRCESPEEPGRRSRLWTYED 356

Query: 315 ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
           +   L  N G + IE IFLD+  IK    +  AF+ MS LRL K                
Sbjct: 357 VCLALMDNTGKEKIEAIFLDMPGIKDAQWNMEAFSKMSKLRLLKI--------------- 401

Query: 375 TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
                  + VQL  G + L  KLR+L W +YP ++LP+  +   LVEL++  S ++Q W 
Sbjct: 402 -------NNVQLSEGPEDLSNKLRFLEWYSYPSKSLPAGLQVDELVELHMANSNLDQLWY 454

Query: 435 GEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG-- 492
           G K             SAL+ K                   IN SY +NL   P ++G  
Sbjct: 455 GCK-------------SALNLK------------------IINLSYSLNLSRTPDLTGIP 483

Query: 493 KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
            +  L L G +++ EV  S+    +L+ ++L  CK + RI  S  ++ SL    L GCL 
Sbjct: 484 NLESLILEGCTSLSEVHPSLGSHKNLQYVNLVNCKSI-RILPSNLEMESLKVFTLDGCLK 542

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
           LE FP+++  M  L  +  D T IT+L SS  +L GL +L +  C  L ++P +I  L+ 
Sbjct: 543 LEKFPDVVRNMNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKS 602

Query: 612 LYYI-LAAASAISQLPSSVALSNMLRSLD 639
           L  + L+  S +  +P ++     L   D
Sbjct: 603 LKKLDLSGCSELKNIPKNLGKVESLEEFD 631



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 147/312 (47%), Gaps = 55/312 (17%)

Query: 646 LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQ 705
           +E+F +     +S + LL I++  + E P++++  + L  L       +SLPA + Q+ +
Sbjct: 387 MEAFSK-----MSKLRLLKINNVQLSEGPEDLS--NKLRFLEWYSYPSKSLPAGL-QVDE 438

Query: 706 LRFIHLEDFNMLQSLP--ELPLCLKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRS 761
           L  +H+ + N+ Q     +  L LK ++L     L   P L     LESL L GC  L  
Sbjct: 439 LVELHMANSNLDQLWYGCKSALNLKIINLSYSLNLSRTPDLTGIPNLESLILEGCTSLSE 498

Query: 762 L-PELP--LCLQYLNLEDCNMLRSLP-ELPL-CLQLLTVRNCNRLQSLPEIL-----LCL 811
           + P L     LQY+NL +C  +R LP  L +  L++ T+  C +L+  P+++     L +
Sbjct: 499 VHPSLGSHKNLQYVNLVNCKSIRILPSNLEMESLKVFTLDGCLKLEKFPDVVRNMNCLMV 558

Query: 812 QELDASVLEKLS---KHSPDLQWAP-------ESLKSAAICFEFTNCLKLNGKANNKILA 861
             LD + + KLS   +H   L           +S+ S+  C +    L L+G +  K + 
Sbjct: 559 LRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKSLKKLDLSGCSELKNIP 618

Query: 862 DSLLRIRHM----AIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQ-----SSG 912
            +L ++  +     +++ R G+               IV+PG+EIP WF+++       G
Sbjct: 619 KNLGKVESLEEFDGLSNPRPGFG--------------IVVPGNEIPGWFNHRKLKEWQHG 664

Query: 913 SSICIQLPPHSS 924
           S   I+L  HSS
Sbjct: 665 SFSNIELSFHSS 676



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 77/194 (39%), Gaps = 50/194 (25%)

Query: 572 RTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVA 630
           RTP          +P LE L +E C+ L  +  ++GS + L Y+ L    +I  LPS++ 
Sbjct: 475 RTP------DLTGIPNLESLILEGCTSLSEVHPSLGSHKNLQYVNLVNCKSIRILPSNLE 528

Query: 631 LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
           + + L+      C  LE FP                          +  ++ L +L L  
Sbjct: 529 MES-LKVFTLDGCLKLEKFPDV------------------------VRNMNCLMVLRLDE 563

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLES 750
                L + I+ +  L  + +     L+S+P    CLK                   L+ 
Sbjct: 564 TGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLK------------------SLKK 605

Query: 751 LDLTGCNMLRSLPE 764
           LDL+GC+ L+++P+
Sbjct: 606 LDLSGCSELKNIPK 619


>gi|224116238|ref|XP_002331995.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832119|gb|EEE70596.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 955

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 249/722 (34%), Positives = 365/722 (50%), Gaps = 96/722 (13%)

Query: 58  QKQMLSTTLSEKLEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           ++Q+LS  L E+  V          K R R  K+L +LDDV++  QL+    E   FG G
Sbjct: 228 REQLLSEILMERASVWDSYRGIEMIKRRSRLKKILHILDDVDDKKQLEFFAAEPGWFGPG 287

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++T+RD  VL     ++ KIY    L  ++A   F   AFK +   ED    S+ VV
Sbjct: 288 SRIIITSRDTNVLTG--NDDTKIYEAEKLNDDDALMLFSQKAFKNDQPDEDFVELSKQVV 345

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            Y  G PL +EV+GS L  +    W   ++ +N I + +I    D+L+ISF+ L    K 
Sbjct: 346 GYANGLPLAIEVIGSFLYARSIPEWRGAINRMNEIPDGKI---IDVLRISFDGLHESDKK 402

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQ 293
           IFLDIACF  G   D +  IL+         + +LI++SL+S+S + + MH++LQ MG++
Sbjct: 403 IFLDIACFLMGFKIDRITRILESRGFHAGIGIPVLIERSLISVSRDQVWMHNLLQIMGKE 462

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IVR ES +EPG+RSRLW  +++   L  + G + IE IFLD+  IK    +  AF+ MS 
Sbjct: 463 IVRCESPEEPGRRSRLWTYEDVCLALMDSTGKEKIEAIFLDMPGIKEAQWNMEAFSKMSK 522

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LRL K                       + VQL  G + L  KLR+L W +YP ++LP+ 
Sbjct: 523 LRLLKI----------------------NNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAG 560

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
            +   LVEL++  S++EQ W G K+ V     N K                         
Sbjct: 561 LQVDELVELHMANSRIEQLWYGCKSAV-----NLK------------------------- 590

Query: 474 VTINFSYCVNLI---EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
             IN S  +NLI   +F +I      +  G +++ EV  S+     LE + L  C  + R
Sbjct: 591 -IINLSNSLNLIKTLDFTRIPNLENLILEGCTSLSEVHPSLARHKKLEYVTLMDCVSI-R 648

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
           I  S  ++ SL   IL GC  LE FP+I+  M  L  ++ D T IT+L SS  +L GLEV
Sbjct: 649 ILPSNLEMESLKVCILDGCSKLEKFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLEV 708

Query: 591 LFVEDC------------------------SKLDNLPDNIGSLEYLYYILAAASAISQLP 626
           L + +C                        S+L N+P N+G +E L  I  + ++I Q P
Sbjct: 709 LSMNNCKNLESIPSSIRCLKSLKKLDLSGCSELQNIPQNLGKVEGLEEIDVSGTSIRQPP 768

Query: 627 SSVALSNMLRSLDSSHCKGLESFPRT----FLLGLSAMGLLHISDYAVRE--IPQEIAYL 680
           +S+ L   L+ L    CK +   P       L GL ++ +L +    +RE  +P++I  L
Sbjct: 769 ASIFLLKSLKVLSLDGCKRIAVNPTGDRLPSLSGLCSLEVLDLCACNLREGALPEDIGCL 828

Query: 681 SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           SSL+ L LS NNF SLP  I Q+S L  + LED  ML+SLPE+P  ++ ++L  C  L+ 
Sbjct: 829 SSLKSLDLSQNNFVSLPESINQLSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCIRLKE 888

Query: 741 LP 742
           +P
Sbjct: 889 IP 890



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 198/434 (45%), Gaps = 60/434 (13%)

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
           ++  L++  S IE++    +   +L++++L     L + +  F ++ +L  LIL GC +L
Sbjct: 565 ELVELHMANSRIEQLWYGCKSAVNLKIINLSNSLNLIK-TLDFTRIPNLENLILEGCTSL 623

Query: 553 EHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
                 L + + L+ +   D   I  LPS+ E +  L+V  ++ CSKL+  PD +G++  
Sbjct: 624 SEVHPSLARHKKLEYVTLMDCVSIRILPSNLE-MESLKVCILDGCSKLEKFPDIVGNMNK 682

Query: 612 LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYA 669
           L  +    + I++L SS+     L  L  ++CK LES P +   L  L  + L   S+  
Sbjct: 683 LTVLHLDETGITKLSSSIHHLIGLEVLSMNNCKNLESIPSSIRCLKSLKKLDLSGCSE-- 740

Query: 670 VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP---ELP-- 724
           ++ IPQ +  +  LE + +SG +    PA I  +  L+ + L+    +   P    LP  
Sbjct: 741 LQNIPQNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLKVLSLDGCKRIAVNPTGDRLPSL 800

Query: 725 --LC-LKYLHLIDCKMLQ-SLPVLPFCLESLDLTGC--NMLRSLPE---LPLCLQYLNLE 775
             LC L+ L L  C + + +LP    CL SL       N   SLPE       L+ L LE
Sbjct: 801 SGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSQNNFVSLPESINQLSGLEMLVLE 860

Query: 776 DCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPES 835
           DC ML SLPE+P  +Q + +  C RL+ +P+ +            KLS           S
Sbjct: 861 DCRMLESLPEVPSKVQTVNLNGCIRLKEIPDPI------------KLSS----------S 898

Query: 836 LKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLI 895
            +S  IC    NC  L           ++L      + + R G+ +A+            
Sbjct: 899 KRSEFICL---NCWALYEHNGQDSFGLTMLERYLKGLPNPRPGFGIAV------------ 943

Query: 896 VLPGSEIPDWFSNQ 909
             PG+EIP WF++Q
Sbjct: 944 --PGNEIPGWFNHQ 955


>gi|297812011|ref|XP_002873889.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319726|gb|EFH50148.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 901

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 224/661 (33%), Positives = 340/661 (51%), Gaps = 99/661 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETA-----GGLEHLQ 58
           S  V++VGIWG  GIGKTT+A+A+F++ S  F+ + F+ +V+G+         G    LQ
Sbjct: 202 STEVKMVGIWGPAGIGKTTIARALFNRLSENFQHTIFMENVKGSYRRTDLDDYGMKLRLQ 261

Query: 59  KQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +Q LS  +  K ++V    +    KER++ +K+L+VLDDV+++ QL  L+ +   FG GS
Sbjct: 262 EQFLSEVIDHKHMKVHDLGL---VKERLQDLKVLVVLDDVDKLEQLDALVKQSQWFGSGS 318

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+VTT +K++L       K IY V      E+ + FC  AF ++  P      +  +  
Sbjct: 319 RIIVTTENKQLLRAHGI--KLIYEVGFPSRGESLQIFCLSAFGQSSAPHGFIKLATEITK 376

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                PL L VLGSSL   R  +  +    L R+  S   DI ++L++S++ L  R KSI
Sbjct: 377 LAGYLPLALTVLGSSL---RGMNKDEQKSALPRLRTSLNEDIKNVLRVSYDSLHERDKSI 433

Query: 238 FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG--NFLNMHDILQEMGR 292
           FL IAC F GE+ D+V  +L  S  DV   L++L ++SL++ISG    + MH +L+++GR
Sbjct: 434 FLHIACLFNGENVDYVKQLLASSGLDVNFGLEVLTNRSLINISGFNRTIMMHTLLEQLGR 493

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIE--GIFLDLSKIKGINLDPRAFTN 350
           ++V ++S  EP KR  L D  +I  VL H+ G  A+   GI +D+SKI    L+  AF  
Sbjct: 494 EVVYEQSIVEPRKRQFLVDASDICDVLFHDSGARAVSVLGISMDISKINEWYLNEEAFAG 553

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M NL   +FY        K PS   + +L+Y    LP  LDYLP KLR LHWD  P++++
Sbjct: 554 MFNLMFLRFY--------KSPSSKDQPELNY----LPLRLDYLPHKLRLLHWDACPMKSM 601

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEG------------------------------EKAC- 439
           P +F+P+ LV LN+R S++E+ WEG                              E+ C 
Sbjct: 602 PMSFRPEFLVVLNIRESQLEKLWEGAPPLRSLKCMDLSMSENLKEIPDLSEAVNIEELCL 661

Query: 440 --------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS 491
                   +PSSI+N   L  L    C +L SFPSN+       +N   C  L  FP+IS
Sbjct: 662 SYCRSLVLLPSSIKNLNKLVVLDMTYCSNLESFPSNIKLESLSILNLDRCSRLESFPEIS 721

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
             +  L L +++I+ VP+++     LE LD+ GC+                         
Sbjct: 722 SNIGYLSLSETSIKNVPATVASWPYLEALDMSGCRY------------------------ 757

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
           L+ FP + E ++ L      R  I E+P   E+L  L+ L +  C +L ++   I  LE+
Sbjct: 758 LDTFPFLPETIKWLDL---SRKEIKEVPLWIEDLVLLKKLLMNSCMELRSISSGICRLEH 814

Query: 612 L 612
           +
Sbjct: 815 I 815



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 109/268 (40%), Gaps = 67/268 (25%)

Query: 552 LEHFPEILEKMEH-LKRIYSDRTPITELPSSF-------------------ENLPGLEVL 591
           L + P  L+ + H L+ ++ D  P+  +P SF                   E  P L  L
Sbjct: 574 LNYLPLRLDYLPHKLRLLHWDACPMKSMPMSFRPEFLVVLNIRESQLEKLWEGAPPLRSL 633

Query: 592 FVEDCSKLDNL---PDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
              D S  +NL   PD   ++      L+   ++  LPSS+   N L  LD ++C  LES
Sbjct: 634 KCMDLSMSENLKEIPDLSEAVNIEELCLSYCRSLVLLPSSIKNLNKLVVLDMTYCSNLES 693

Query: 649 FPRTF------LLGL-------------SAMGLLHISDYAVREIPQEIAYLSSLEILYLS 689
           FP         +L L             S +G L +S+ +++ +P  +A    LE L +S
Sbjct: 694 FPSNIKLESLSILNLDRCSRLESFPEISSNIGYLSLSETSIKNVPATVASWPYLEALDMS 753

Query: 690 G----NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL------CLKYLHLIDCKMLQ 739
           G    + F  LP  IK +   R          + + E+PL       LK L +  C  L+
Sbjct: 754 GCRYLDTFPFLPETIKWLDLSR----------KEIKEVPLWIEDLVLLKKLLMNSCMELR 803

Query: 740 SLPVLPFC----LESLDLTGCNMLRSLP 763
           S+     C    +E+LD  GC  + S P
Sbjct: 804 SISS-GICRLEHIETLDFLGCKNVVSFP 830


>gi|224127230|ref|XP_002329432.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870482|gb|EEF07613.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1136

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 285/954 (29%), Positives = 436/954 (45%), Gaps = 223/954 (23%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V IVGIWGMGGIGKTT+A+A+ ++   +FE   F ++ R  S+       L ++ L 
Sbjct: 240 SPDVLIVGIWGMGGIGKTTIAEAVCNKVHSQFE-RIFFANCRQQSD-------LPRRFLK 291

Query: 64  TTLS-EKLEVAGP--NIPHFTKERVRRMKLLIVLDDVNEVGQLKR----LIGELDQFGQG 116
             L  E L   G    +  F ++R+RR+K+ IVLDDV+++ +L      L G  + FG G
Sbjct: 292 RLLGQETLNTMGSLSFLDSFVRDRLRRIKVFIVLDDVDDLMRLDEWRDLLDGRNNSFGSG 351

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV- 175
           S++++T+R+K++L+    E    Y V GL + +A + F + A K  +C   ++     + 
Sbjct: 352 SKVLITSRNKQLLKNVVDE---TYEVEGLNYADAIQLFSSKALK--NCIPTIDQRHLIIK 406

Query: 176 -VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
            V + +GNPL L+VLGSSL  K    W   L  L    + E       L+IS++ L    
Sbjct: 407 NVRHVQGNPLALKVLGSSLYDKSIEEWRSALKKLALDPQIE-----RALRISYDGLDLEQ 461

Query: 235 KSIFLDIACFFEGEDKDFVASILD--DSESDVLDI--LIDKSLVSISGNF-----LNMHD 285
           K IFLDIA FF+G  +     ILD    +S   DI  LIDK L+S + ++     L MHD
Sbjct: 462 KPIFLDIAHFFKGRMQGEATGILDCLYGQSVNFDISTLIDKCLISTAKDYFHRDKLEMHD 521

Query: 286 ILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLD 344
           +LQEM   IVR ES+  PG+RSRL  P ++ ++L+ NKGT  I+GI LD+S + + I+L 
Sbjct: 522 LLQEMAFNIVRAESDF-PGERSRLSHPPDVVQLLEENKGTQQIKGISLDMSMLSRQIHLK 580

Query: 345 PRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT 404
             AF  M  LR    Y  ++ + +K+  +             P GL+YLP +LRY  W  
Sbjct: 581 SDAFAMMDGLRFLNIYFSRYSKEDKILHLP------------PTGLEYLPNELRYFLWSR 628

Query: 405 YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSF 464
           +PL++LP +F+ ++LVEL+LR SK+ + W G K      + N +                
Sbjct: 629 FPLKSLPPSFRAEHLVELHLRKSKLVKLWTGVK-----DVGNLR---------------- 667

Query: 465 PSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRG 524
                      I+ S    L E P +S                        +L  LDL  
Sbjct: 668 ----------RIDLSDSPYLTELPDLS---------------------MAKNLVSLDLTD 696

Query: 525 CKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
           C  L  + +S   L  L  + L  C NL  FP +  K+                      
Sbjct: 697 CPSLTEVPSSLQYLDKLEKIYLFRCYNLRSFPMLDSKV---------------------- 734

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
              L  L +  C  +   P    ++E+L+      ++I ++P SV  +  L  L  S C 
Sbjct: 735 ---LRFLLISRCLDVTTCPTISQNMEWLWL---EQTSIKEVPQSV--TGKLERLCLSGCP 786

Query: 645 GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
            +  FP         + +L +   A++E+P  I +L+ LE+L +SG              
Sbjct: 787 EITKFPEIS----GDIEILDLRGTAIKEVPSSIQFLTRLEVLDMSG-------------- 828

Query: 705 QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNML-RSLP 763
                     + L+SLPE+ + ++ LH +                 L  TG   +  SL 
Sbjct: 829 ---------CSKLESLPEITVPMESLHSL----------------KLSKTGIKEIPSSLI 863

Query: 764 ELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLS 823
           +  + L +LNL D   +++LPELP  L+ LT  +C  L+++   +               
Sbjct: 864 KHMISLTFLNL-DGTPIKALPELPPSLRYLTTHDCASLETVTSSI--------------- 907

Query: 824 KHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAI 883
                      ++    +  +FTNC KL+ K         L+   H+ I S   G E+  
Sbjct: 908 -----------NIGRLELGLDFTNCFKLDQKP--------LVAAMHLKIQS---GEEIPD 945

Query: 884 NEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
                   G  +VLPGSEIP+WF ++  GSS+ +QLP  S+C  L G AFC V 
Sbjct: 946 G-------GIQMVLPGSEIPEWFGDKGIGSSLTMQLP--SNCHQLKGIAFCLVF 990


>gi|238478649|ref|NP_001154372.1| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
 gi|332192669|gb|AEE30790.1| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
          Length = 1384

 Score =  316 bits (810), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 306/1073 (28%), Positives = 483/1073 (45%), Gaps = 153/1073 (14%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            +SS  VQ++G++GMGGIGKTTLAKA +++    FE   F+SD+R  S    GL  LQK +
Sbjct: 206  ESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFEQRAFISDIRERSSAENGLVTLQKTL 265

Query: 62   LSTTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            +        E+   +I     K  V   K+++VLDDV+ + Q+  L+GE   +GQG+ IV
Sbjct: 266  IKELFRLVPEIEDVSIGLEKIKANVHEKKIIVVLDDVDHIDQVHALVGETRWYGQGTLIV 325

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            +TTRD  +L K    ++  Y V  L   +A + F   + ++    ++L   S+ +V  + 
Sbjct: 326  ITTRDSEILSKLSVNQQ--YEVKCLTEPQALKLFSYHSLRKEEPTKNLLALSKKIVQISG 383

Query: 181  GNPLVLEVLGSSLCLKRKSH-WGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
              PL +EV GS L  K++   W      L+++ +++  ++ D+L++SF  L    K +FL
Sbjct: 384  LLPLAVEVFGSLLYDKKEEKDWQT---QLDKLKKTQPGNLQDVLELSFKSLDDEEKKVFL 440

Query: 240  DIACFFEGED--KDFVASILDD---SESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQ 293
            DIAC F   +  KD V  +L     +    L +L  KSLV I  N  L MHD +++MGRQ
Sbjct: 441  DIACLFLKMEIKKDEVVIVLKGCGLNAEAALSVLRQKSLVKILANDTLWMHDQIRDMGRQ 500

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS- 352
            +V +ES ++PG RSRLWD  EI  VL + KGT +I GI LD    K    DP A   +S 
Sbjct: 501  MVLKESREDPGLRSRLWDRGEIMTVLNNMKGTSSIRGIVLDFK--KKFARDPTADEIVSR 558

Query: 353  NLR---------------LFKFYV---PKFYEI----EKLPSMSTEEQLSYSKVQLPNGL 390
            NLR               L +F     PK  EI    E    M+    L  + V+L   L
Sbjct: 559  NLRNNPGIYSVFNYLKNKLVRFPAEEKPKSSEITIPVESFAPMTKLRLLQINNVELEGNL 618

Query: 391  DYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE-------------K 437
              LP +L+++ W   PL  LP +F  + L  L+L  S + Q                  +
Sbjct: 619  KLLPSELKWIQWKGCPLENLPPDFLARQLSVLDLSESGIRQVQTLRNKMVDENLKVVILR 678

Query: 438  AC----------------------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLH 469
             C                            VP S+ N + L  L F+ C  L  F  ++ 
Sbjct: 679  GCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVS 738

Query: 470  FVCPVTINF-SYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
             +  +   F S C +L   P+  G +T    L L  +AI+ +P SI  L +LE+L LRGC
Sbjct: 739  GLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC 798

Query: 526  K----------------------RLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKME 563
            K                       LK + +S   L++L  L L+ C +L   P+ + +++
Sbjct: 799  KIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELK 858

Query: 564  HLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAIS 623
             LK+++ + + + ELP    +LP L      DC  L  +P +IG L  L  +  +++ I 
Sbjct: 859  SLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIE 918

Query: 624  QLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSL 683
             LP  +   + +R L+  +CK L+  P++ +  +  +  L++    + E+P+E   L  L
Sbjct: 919  ALPEEIGALHFIRELELRNCKFLKFLPKS-IGDMDTLYSLNLEGSNIEELPEEFGKLEKL 977

Query: 684  EILYLSG-NNFESLPAIIKQMSQLRFIHL---------EDFNMLQSLPELPLCLKYLHLI 733
              L +S     + LP     +  L  +++         E F  L +L  L +  K L  I
Sbjct: 978  VELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRI 1037

Query: 734  DCKMLQSLPVLP------------FCLESLDLTGCNMLRSLP---ELPLCLQYLNLEDCN 778
                +      P              LE LD     +   +P   E   CL  LNL + N
Sbjct: 1038 SESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLGN-N 1096

Query: 779  MLRSLPELPL---CLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPES 835
               SLP   +    LQ L++R+C  L+ LP +   L++L+ +    L   S DL     S
Sbjct: 1097 YFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVS-DL-----S 1150

Query: 836  LKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSL- 894
              +       TNC K+          + L  ++ + +      Y +A+ ++LS+    + 
Sbjct: 1151 ELTILTDLNLTNCAKVVDIPG----LEHLTALKRLYMTGCNSNYSLAVKKRLSKASLKMM 1206

Query: 895  --IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSD 945
              + LPG+ +PDWFS       +     P+   R +I  A    L+ +  D D
Sbjct: 1207 RNLSLPGNRVPDWFSQ----GPVTFSAQPNRELRGVI-IAVVVALNDETEDDD 1254


>gi|357521387|ref|XP_003630982.1| NBS-LRR resistance-like protein [Medicago truncatula]
 gi|355525004|gb|AET05458.1| NBS-LRR resistance-like protein [Medicago truncatula]
          Length = 1177

 Score =  316 bits (810), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 289/958 (30%), Positives = 451/958 (47%), Gaps = 129/958 (13%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
            KTT+A AI+ + + +F  +  + +V+   E  G L H+Q +     L E    +G  +  
Sbjct: 153  KTTIASAIYRKLATQFSFNSIILNVQQEIERFG-LHHIQSKYRFELLGENNTSSGLCLSF 211

Query: 80   FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKI 139
               +R++  K L+VLDDVN   QL+ LIG+L +F  GSRI+VT+RD +VL+  + +   I
Sbjct: 212  --DQRLKWTKALLVLDDVNNSDQLRDLIGKLSKFAPGSRIIVTSRDMQVLKNVKAD--GI 267

Query: 140  YRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKS 199
            Y V  + F E+   FC  AFK+++  E     S ++++Y K  PL L+VLG  LC + K 
Sbjct: 268  YEVKEMNFHESLRLFCLNAFKQSYPLEGYVGLSENILNYAKRVPLALKVLGFLLCGRPKE 327

Query: 200  HWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDD 259
             W   L  L+++ E   +DI+++LK+S+ +L      IFLDIACF+ G  ++ V   LD 
Sbjct: 328  AWESQLQKLDKLPE---NDIFEVLKLSYVELDEEQNEIFLDIACFYRGHLENVVLQTLDS 384

Query: 260  ---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
               S    +++L D+ L+SI  + + MHD++QEMG +IV Q+   +PGKRSRLW  +EI 
Sbjct: 385  CGFSSLIGIEVLKDRGLISIVESRIVMHDLIQEMGHEIVHQQCVNDPGKRSRLWKHREIY 444

Query: 317  RVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTE 376
            +VL++NKGTDAI  I LD+ KI+ + L    F  M NLR+  FY P  Y + K       
Sbjct: 445  KVLRNNKGTDAIRCILLDICKIEKVQLHAETFKKMDNLRMMLFYKP--YGVSK------- 495

Query: 377  EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE 436
                 S V LP  L+ LP  L++L WD +P ++LP +F P NLV+L +  S ++Q W+ +
Sbjct: 496  ----ESNVILPAFLESLPDDLKFLRWDGFPQKSLPEDFFPDNLVKLYMPHSHLKQLWQRD 551

Query: 437  KACV-------PSSIQNF-KYLSALSFKGCQSLRS--FPSNLHFVCPVTINFSYCVNLIE 486
            K  +          ++NF   L  L    C SL+S   PSN+            C +L  
Sbjct: 552  KNLIQIPDLVNAQILKNFLSKLKCLWLNWCISLKSVHIPSNILQTTSGLTVLHGCSSLDM 611

Query: 487  FPQISGKV---------------TRLYLGQSAIEEVPSSIECLT----DLEVLDLRGCKR 527
            F   + K+                RL +  +A  +    +E  T    D  VL+      
Sbjct: 612  FVVGNEKMRVQRATPYDINMSRNKRLRIVATAQNQSIPPLESNTFEPLDFVVLNKEPKDN 671

Query: 528  LKRISTSFCKLRS---LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
            ++ +S    +  S     +L  L  L+L H   +L            R  I ELPSS ++
Sbjct: 672  IQLLSLEVLREGSPSLFPSLNELCWLDLSHCDSLL------------RDCIMELPSSLQH 719

Query: 585  LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
            L GLE L +  C +L+ +P +IGSL                       + L  LD ++C+
Sbjct: 720  LVGLEELSLCYCRELETIPSSIGSL-----------------------SKLSKLDLTYCE 756

Query: 645  GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIK-QM 703
             LE+FP +          LH     ++  P  +    +   + L+    + LP+ ++  +
Sbjct: 757  SLETFPSSIFKLKLKKLDLHGCS-MLKNFPDILEPAETFVHINLTKTAIKELPSSLEYNL 815

Query: 704  SQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLP 763
              L+ + L+  + L SLP   + L YL  IDC    SL  +P           N+     
Sbjct: 816  VALQTLCLKLCSDLVSLPNSVVNLNYLSEIDCSGCCSLTEIP----------NNIGSLSS 865

Query: 764  ELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLS 823
               L LQ  N+   N+  S+  L   L+ L +  C RL+ +P++   L +L A     + 
Sbjct: 866  LRKLSLQESNV--VNLPESIANLS-NLKSLDLSFCKRLECIPQLPSSLNQLLAYDCPSVG 922

Query: 824  KHSPDLQWAPESLKSAAI-CFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMA 882
            +  P+ +    ++    I  F FTN  +L+    + I A++ LRI   A  SL       
Sbjct: 923  RMMPNSRLELSAISDNDIFIFHFTNSQELDETVCSNIGAEAFLRITRGAYRSL------- 975

Query: 883  INEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRN---LIGFAFCAVL 937
                           PGS +P  F  + +GS + ++      C N   L GFA C VL
Sbjct: 976  -----------FFCFPGSAVPGRFPYRCTGSLVTME-KDSVDCPNNYRLFGFALCVVL 1021


>gi|356497814|ref|XP_003517752.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1376

 Score =  316 bits (809), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 305/1068 (28%), Positives = 469/1068 (43%), Gaps = 207/1068 (19%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFS-HEFEGSCFVSDVRGNSETAGGLEHLQKQM- 61
            S+ V+++G++GMGG+GKTTLAK++F+    H FE   F++++R       GL  LQ  + 
Sbjct: 204  SNDVRVLGLYGMGGVGKTTLAKSLFNSLVVHNFERRSFITNIRSQVSKHDGLVSLQNTIH 263

Query: 62   --LSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
              LS    + +      I    K  V+  ++L++LDDV+EV QLK L+GE + F +GSR+
Sbjct: 264  GDLSGGKKDPINDVNDGISAI-KRIVQENRVLLILDDVDEVEQLKFLMGEREWFYKGSRV 322

Query: 120  VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
            V+TTRD+ VL K +    K Y V  LEF  + E FC  A +     E     ++ +V  T
Sbjct: 323  VITTRDREVLTKAKSYVDKHYEVKELEFSPSMELFCYHAMRRKEPAEGFLDLAKQIVEKT 382

Query: 180  KGNPLVLEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV GS L  KR    W   +  + +I  S IH   D+LKISF+ L  + K IF
Sbjct: 383  GGLPLALEVFGSFLFDKRTMREWKDAVEKMKQISPSGIH---DVLKISFDALDEQEKCIF 439

Query: 239  LDIACFFEGED--KDFVASILD--DSESDV-LDILIDKSLVSISGNF-LNMHDILQEMGR 292
            LDIAC F   +  ++ V  IL+  +   D+ L +L  + L+ I+G+  L MHD +++MGR
Sbjct: 440  LDIACLFVQMEMKREDVVDILNGCNFRGDIALTVLTARCLIKITGDGKLWMHDQVRDMGR 499

Query: 293  QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA----- 347
            QIV  E+  +PG RSRLWD  EI  VLK  KGT  ++GI +D  K +      R+     
Sbjct: 500  QIVHSENLADPGLRSRLWDRDEILIVLKSMKGTRNVQGIVVDCVKRRMSTPRDRSADEIT 559

Query: 348  ---FTNMSNLRLFKFYVPKFY----------------EIEKLPSMSTEEQLSYSKVQLPN 388
               F    + +L   Y+ + Y                + +   SM +   L  +  +L  
Sbjct: 560  WENFRRKPSCKLALEYIKEKYKKYVRDREEKAKEVVLQAKNFESMVSLRLLQINYSRLEG 619

Query: 389  GLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFK 448
                LP  L++L W   PLR +PS++ P  L  ++L  S +E  W      V       +
Sbjct: 620  QFRCLPPGLKWLQWKQCPLRYMPSSYSPLELAVMDLSESNIETLWSRSNNKVA------E 673

Query: 449  YLSALSFKGCQSLRSFPSNLHFV---------CP---------------VTINFSYCVNL 484
            +L  L+   C  L + P    ++         C                V +N  +C NL
Sbjct: 674  HLMVLNLSNCHRLTATPDLTGYLSLKKIVLEECSHLIRIHESLGNLSSLVHLNLRFCYNL 733

Query: 485  IEFP-QISGK--------------------------VTRLYLGQSAIEEVPSSIECLTDL 517
            +E P  +SG                           + +L +  +A+ E+P SI  LT L
Sbjct: 734  VELPSDVSGMKHLEDLILSDCWKLKALPKDLSCMICLRQLLIDNTAVTELPESIFHLTKL 793

Query: 518  EVLDLRGCKRLKRISTSFCKLRSLV-----------------------TLILLGCLNLEH 554
            E L   GC  LKR+ T   KL SL                         L L+GC +L  
Sbjct: 794  ENLSANGCNSLKRLPTCIGKLCSLQELSLNHTALEELPYSVGSLEKLEKLSLVGCKSLSV 853

Query: 555  FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
             P  +  +  L +++ D + I ELP+S  +L  L  L V  C+ LD LP +I +L  +  
Sbjct: 854  IPNSIGNLISLAQLFLDISGIKELPASIGSLSYLRKLSVGGCTSLDKLPVSIEALVSIVE 913

Query: 615  ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP 674
            +    + I+ LP  +    ML  L+  +C+ L   P +F   LSA+  L + +  + E+P
Sbjct: 914  LQLDGTKITTLPDQIDAMQMLEKLEMKNCENLRFLPVSFGC-LSALTSLDLHETNITELP 972

Query: 675  QEIAYLSSLEILYL-----------SGNNFESLPAIIKQMSQLRFIHLED-FNMLQSLPE 722
            + I  L +L  L L           S  N +SL  +  QM +    HL D F ML SL +
Sbjct: 973  ESIGMLENLIRLRLDMCKQLQRLPDSFGNLKSLQWL--QMKETTLTHLPDSFGMLTSLVK 1030

Query: 723  LPLCLK-YLHLIDCKML------QSLPVL-PFC----LESLDLTGCNMLRSLPE------ 764
            L +  + YL+     ++       S  +L  FC    LE L+  G  M   +P+      
Sbjct: 1031 LDMERRLYLNGATGVIIPNKQEPNSKAILRSFCNLTLLEELNAHGWGMCGKIPDDFEKLS 1090

Query: 765  --LPLCLQYLNL------------------EDCNMLRSLPELPLCLQLLTVRNCNRLQSL 804
                L L + N+                   DC  L  LP LP  L+ L + NC  +Q +
Sbjct: 1091 SLETLSLGHNNIFSLPASMIGLSYLKKLLLSDCRELIFLPPLPSSLEELNLANCIAVQYM 1150

Query: 805  PEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSL 864
             +I                           S          TNC K+          + L
Sbjct: 1151 HDI---------------------------SNLKLLEELNLTNCEKVVDIPG----LEHL 1179

Query: 865  LRIRHMAIASLRLGYEMAINEKLSEL---RGSLIVLPGSEIPDWFSNQ 909
              +R + +    +G   A+  + +++   +  ++++PGS +PDWF+ +
Sbjct: 1180 KSLRRLYMNGC-IGCSHAVKRRFTKVLLKKLEILIMPGSRVPDWFTAE 1226


>gi|93117599|gb|ABE99702.1| TIR-NBS-LRR disease resistance-like protein [Populus trichocarpa]
          Length = 1142

 Score =  316 bits (809), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 241/774 (31%), Positives = 392/774 (50%), Gaps = 102/774 (13%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           ++D V+IVGI GM GIGKT++AK +F+QF + FEGSCF+S++   SE + GL  LQ+Q+L
Sbjct: 235 AADEVRIVGIHGMPGIGKTSIAKVVFNQFCYRFEGSCFLSNINETSEQSNGLVLLQEQLL 294

Query: 63  STTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
              L +   V   N+       KER+   ++L+V+DD+    QL  L+GE   FG GSR+
Sbjct: 295 HDILKQN-TVNISNVVRGLVLIKERICHKRVLVVVDDLAHQNQLNALMGERSWFGPGSRV 353

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TT+D+ +L K      + YRV  L+ +E+ + F   AF +    +D    S  VV Y 
Sbjct: 354 IITTKDEHLLLKV----DRTYRVEELKRDESLQLFSWHAFGDTKPAKDYVELSNDVVDYC 409

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR-VKSIF 238
            G PL LEVLGS L  K ++ W  ++ +L +I   EI      L+ISF+ L    +++ F
Sbjct: 410 GGLPLALEVLGSCLSGKNRARWKCLIDELRKIPNREIQ---KKLRISFDSLDDHELQNTF 466

Query: 239 LDIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQ 293
           LDIACFF G +K++VA +L+     +  D L  L ++SL+ +     ++MHD+L++MGR 
Sbjct: 467 LDIACFFIGRNKEYVAKVLEARCGYNPEDDLGTLSERSLIKVDAFGKISMHDLLRDMGRD 526

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           I+ +ES   PGKRSR+W  ++   VL  + GT+ +EG+ LD    +  +L   +FT M  
Sbjct: 527 IIHKESPGHPGKRSRIWQREDAWNVLNKHMGTEVVEGLALDARASEDKSLSTGSFTKMRF 586

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           L+L                      L  + V L      L ++L ++ W   PL++ PS+
Sbjct: 587 LKL----------------------LQINGVHLTGPFKLLSEELIWICWLECPLKSFPSD 624

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
               NLV L+++ S +++ W+ +K      +   K L                       
Sbjct: 625 LMLDNLVVLDMQHSNIKELWKEKKI-----LNKLKIL----------------------- 656

Query: 474 VTINFSYCVNLIEFPQI-SGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
              N S+  +LI+ P + S  + +L L G S++ EV  S+  L  L +L+L+GC R+K +
Sbjct: 657 ---NLSHSKHLIKTPNLHSSSLEKLMLEGCSSLVEVHQSVGHLKSLILLNLKGCWRIKIL 713

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
             S C + SL +L + GC  LE  PE +  ++ L  + +D     +  SS          
Sbjct: 714 PESICDVNSLKSLNISGCSQLEKLPERMSDIKSLTELLADEIQNEQFLSS---------- 763

Query: 592 FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLP-SSVALSNMLRSLDSSHCKGLESFP 650
                         IG L++L  +    S  +Q   SS +  + + +  S+    ++ F 
Sbjct: 764 --------------IGHLKHLRKLSLRVSNFNQDSLSSTSCPSPISTWISASVLRVQPFL 809

Query: 651 RTFLLGLSAMGLLHISDYAVREIPQEIAY---LSSLEILYLSGNNFESLPAIIKQMSQLR 707
            T  +   ++  L +++Y + E      Y   LSSL+ L LSGN F SLP+ I  +++L+
Sbjct: 810 PTSFIDWRSVKRLKLANYGLSESATNCVYFGGLSSLQELNLSGNKFLSLPSGISVLTKLQ 869

Query: 708 FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS--LPVLPFCLESLDLTGCNML 759
            + +++ + L S+ ELP  L+ L+   C+ ++   LP+       L L GC  L
Sbjct: 870 HLRVQNCSNLVSISELPSSLEKLYADSCRSMKRVCLPIQSKTNPILSLEGCGNL 923



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 134/346 (38%), Gaps = 38/346 (10%)

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
           LE L +E CS L  +  ++G L+ L  + L     I  LP S+   N L+SL+ S C  L
Sbjct: 675 LEKLMLEGCSSLVEVHQSVGHLKSLILLNLKGCWRIKILPESICDVNSLKSLNISGCSQL 734

Query: 647 ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFE-------SLPAI 699
           E  P   +  + ++  L   +    +    I +L  L  L L  +NF        S P+ 
Sbjct: 735 EKLPER-MSDIKSLTELLADEIQNEQFLSSIGHLKHLRKLSLRVSNFNQDSLSSTSCPSP 793

Query: 700 IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNML 759
           I        + ++ F        LP        ID + ++ L +  + L S   T C   
Sbjct: 794 ISTWISASVLRVQPF--------LPTSF-----IDWRSVKRLKLANYGL-SESATNCVYF 839

Query: 760 RSLPELPLCLQYLNLEDCNMLRSLPE---LPLCLQLLTVRNCNRLQSLPEILLCLQELDA 816
             L  L    Q LNL   N   SLP    +   LQ L V+NC+ L S+ E+   L++L A
Sbjct: 840 GGLSSL----QELNLSG-NKFLSLPSGISVLTKLQHLRVQNCSNLVSISELPSSLEKLYA 894

Query: 817 SVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLR 876
                + +    +Q     + S   C        + G +N+  +      I       L 
Sbjct: 895 DSCRSMKRVCLPIQSKTNPILSLEGCGNLIEIQGMEGLSNHGWV------IFSSGCCDLS 948

Query: 877 LGYEMAINEKL-SELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
              + +  E L S   G  I   G  +P W S    GSS+   +PP
Sbjct: 949 NNSKKSFVEALRSGGYGYQIHFDGGTMPSWLSFHGEGSSLSFHVPP 994


>gi|16944811|emb|CAC82811.1| resistance gene-like [Solanum tuberosum subsp. andigenum]
          Length = 1126

 Score =  316 bits (809), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 265/775 (34%), Positives = 382/775 (49%), Gaps = 119/775 (15%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V+IV IWGMGG+GKTT+A+AIFD  S +F+G+CF+ D   N E    +  LQ  +LS 
Sbjct: 220 DDVRIVWIWGMGGVGKTTIARAIFDILSSKFDGACFLPD---NKENKYEIHSLQSILLSK 276

Query: 65  TLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
            + EK        +  H    R+R  K+L+VLD+++   QLK L G+L  FG G+RI+ T
Sbjct: 277 LVGEKENCVHDKEDGRHLMARRLRLKKVLVVLDNIDHEDQLKYLAGDLGWFGNGTRIIAT 336

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKE---NHCPEDLNWHSRSVVSYT 179
           TRDK  + K       +Y V  L   +A + F  +AFK    + C E++   +  VVS+ 
Sbjct: 337 TRDKHFIRK----NDAVYPVTTLLEHDAVQLFNQYAFKNEVPDKCFEEI---TLEVVSHA 389

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           +G PL L+V GSSL  K    W      ++RI  +    + + LK+S++ L    + IFL
Sbjct: 390 EGLPLALKVWGSSLHKKDIHVWRSA---VDRIKRNPSSKVVENLKVSYDGLEREDQEIFL 446

Query: 240 DIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIV 295
           DIACF  G  +  +  IL   D    D L +LIDKSLV IS  + + MHD++QEMG+ IV
Sbjct: 447 DIACFLRGRKQTEIKQILESCDFGADDGLRVLIDKSLVFISEYDTIQMHDLIQEMGKYIV 506

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHN-KGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
               +K+ G+ +RLW  ++  +      +GT AIE I+  + +I+ ++   +A  ++  L
Sbjct: 507 TM--QKDRGEVTRLWLTQDFEKFSNAKIQGTKAIEAIW--IPEIQDLSFRKKAMKDVEKL 562

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           R+   Y+  F+     P  S ++              YLP  LR+     YP  +LP+ F
Sbjct: 563 RI--LYINGFH----TPDGSNDQ--------------YLPSNLRWFDCCKYPWESLPAKF 602

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
            P  LV L+L+ S +   W G K         F +L  L                     
Sbjct: 603 DPDMLVHLDLQQSSLFHLWTGTK--------KFPFLRRL--------------------- 633

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQ---SAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
             + S C NL+  P  +      YLG    S ++EV  S+ C   L  L+LR CK L+  
Sbjct: 634 --DLSSCANLMRTPDFTDMPNLEYLGLEECSNLKEVHHSLRCSKKLIKLNLRDCKNLE-- 689

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPS----------- 580
           S S+    SL  L L GC NLE FP I  K++    I   R+ I +LPS           
Sbjct: 690 SFSYVCWESLECLHLQGCSNLEKFPRIRGKLKPEIEIQVQRSGIRKLPSAIIQHQSSLTE 749

Query: 581 --------------SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLP 626
                         S   L  L +L V  CSKL +LP+ IG LE L  + A  + ISQ P
Sbjct: 750 LDLSGMKNLATLSCSIGELKSLVMLKVSYCSKLKSLPEEIGDLENLEILKAGYTLISQPP 809

Query: 627 SSVALSNMLRSLDSSHCK---GLES-----FPRTFLLGLSAMGLLHISDYAVRE--IPQE 676
           SS+   N L+ L  +  K   GLE      FP     GL ++  L++S   +++  +PQ+
Sbjct: 810 SSIVRLNRLKFLTFAKQKSEVGLEDEVHFVFP-PVNQGLCSLKTLNLSYCNLKDEGLPQD 868

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
           I  LSSLE+L L GNNFE LP  + ++S L+ + L D   L  LPE P  L  ++
Sbjct: 869 IGSLSSLEVLNLRGNNFEHLPQSLTRLSSLQSLDLLDCKSLTQLPEFPRQLDTIY 923


>gi|16944812|emb|CAC82812.1| resistance gene-like [Solanum tuberosum subsp. andigenum]
          Length = 1101

 Score =  316 bits (809), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 265/775 (34%), Positives = 382/775 (49%), Gaps = 119/775 (15%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V+IV IWGMGG+GKTT+A+AIFD  S +F+G+CF+ D   N E    +  LQ  +LS 
Sbjct: 195 DDVRIVWIWGMGGVGKTTIARAIFDILSSKFDGACFLPD---NKENKYEIHSLQSILLSK 251

Query: 65  TLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
            + EK        +  H    R+R  K+L+VLD+++   QLK L G+L  FG G+RI+ T
Sbjct: 252 LVGEKENCVHDKEDGRHLMARRLRLKKVLVVLDNIDHEDQLKYLAGDLGWFGNGTRIIAT 311

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKE---NHCPEDLNWHSRSVVSYT 179
           TRDK  + K       +Y V  L   +A + F  +AFK    + C E++   +  VVS+ 
Sbjct: 312 TRDKHFIRK----NDAVYPVTTLLEHDAVQLFNQYAFKNEVPDKCFEEI---TLEVVSHA 364

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           +G PL L+V GSSL  K    W      ++RI  +    + + LK+S++ L    + IFL
Sbjct: 365 EGLPLALKVWGSSLHKKDIHVWRSA---VDRIKRNPSSKVVENLKVSYDGLEREDQEIFL 421

Query: 240 DIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIV 295
           DIACF  G  +  +  IL   D    D L +LIDKSLV IS  + + MHD++QEMG+ IV
Sbjct: 422 DIACFLRGRKQTEIKQILESCDFGADDGLRVLIDKSLVFISEYDTIQMHDLIQEMGKYIV 481

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHN-KGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
               +K+ G+ +RLW  ++  +      +GT AIE I+  + +I+ ++   +A  ++  L
Sbjct: 482 TM--QKDRGEVTRLWLTQDFEKFSNAKIQGTKAIEAIW--IPEIQDLSFRKKAMKDVEKL 537

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           R+   Y+  F+     P  S ++              YLP  LR+     YP  +LP+ F
Sbjct: 538 RI--LYINGFH----TPDGSNDQ--------------YLPSNLRWFDCCKYPWESLPAKF 577

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
            P  LV L+L+ S +   W G K         F +L  L                     
Sbjct: 578 DPDMLVHLDLQQSSLFHLWTGTK--------KFPFLRRL--------------------- 608

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQ---SAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
             + S C NL+  P  +      YLG    S ++EV  S+ C   L  L+LR CK L+  
Sbjct: 609 --DLSSCANLMRTPDFTDMPNLEYLGLEECSNLKEVHHSLRCSKKLIKLNLRDCKNLE-- 664

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPS----------- 580
           S S+    SL  L L GC NLE FP I  K++    I   R+ I +LPS           
Sbjct: 665 SFSYVCWESLECLHLQGCSNLEKFPRIRGKLKPEIEIQVQRSGIRKLPSAIIQHQSSLTE 724

Query: 581 --------------SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLP 626
                         S   L  L +L V  CSKL +LP+ IG LE L  + A  + ISQ P
Sbjct: 725 LDLSGMKNLATLSCSIGELKSLVMLKVSYCSKLKSLPEEIGDLENLEILKAGYTLISQPP 784

Query: 627 SSVALSNMLRSLDSSHCK---GLES-----FPRTFLLGLSAMGLLHISDYAVRE--IPQE 676
           SS+   N L+ L  +  K   GLE      FP     GL ++  L++S   +++  +PQ+
Sbjct: 785 SSIVRLNRLKFLTFAKQKSEVGLEDEVHFVFP-PVNQGLCSLKTLNLSYCNLKDEGLPQD 843

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
           I  LSSLE+L L GNNFE LP  + ++S L+ + L D   L  LPE P  L  ++
Sbjct: 844 IGSLSSLEVLNLRGNNFEHLPQSLTRLSSLQSLDLLDCKSLTQLPEFPRQLDTIY 898


>gi|356561376|ref|XP_003548958.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1049

 Score =  315 bits (808), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 259/751 (34%), Positives = 368/751 (49%), Gaps = 124/751 (16%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK---LEVAGPN 76
           KTTLA+AI++  + +FE  CF+ +VR NS    GL HLQ+ +LS T+ EK   L      
Sbjct: 225 KTTLARAIYNLIADQFEVLCFLDNVRENS-IKNGLVHLQETLLSKTIGEKGIKLGSINEA 283

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           IP   K R+ R K+L+VLDDV++  QL  + G +D FG GSR+++TTR++ +L     E 
Sbjct: 284 IP-IIKHRLHRKKVLLVLDDVDKPDQLHAIAGGMDWFGSGSRVIITTRNRHLLTCHGVE- 341

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHC-PEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
             IY V+GL  +EA E     AFK     P  +N  +R+V +Y  G PL L+V+GS+L  
Sbjct: 342 -SIYEVHGLNHKEALELLSWSAFKTGKVDPCYVNILNRAV-TYASGLPLALKVIGSNLIG 399

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           KR   W   L    RI      DI DILK+SF+ L    ++IFLDIAC F+G     V  
Sbjct: 400 KRIEEWESALDQYQRIPNK---DIQDILKVSFDSLEEYEQNIFLDIACCFKGYRLSEVKE 456

Query: 256 ILDDSESDV----LDILIDKSLVSIS--GNFLNMHDILQEMGRQIVRQESEKEPGKRSRL 309
           IL           + +LIDKSL+ I   GN + +HD++++MG++IVR+ES +EP  RSRL
Sbjct: 457 ILFSHHGFCPQYGIGVLIDKSLIKIDCFGN-VTLHDLIEDMGKEIVRRESPEEPENRSRL 515

Query: 310 WDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEK 369
           W P++I +VL+ NKGT  I+ I LD    + +  D  AF  M+NL+        F     
Sbjct: 516 WCPEDIVQVLEENKGTSRIQMIALDYLNYEEVEWDGMAFKEMNNLKTLIIRGGCF----- 570

Query: 370 LPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKV 429
                              G  +LP  LR L W  YP  +LP +F PK LV L L     
Sbjct: 571 -----------------TTGPKHLPNSLRVLEWRRYPSPSLPFDFNPKKLVSLQL----- 608

Query: 430 EQPWEGEKACVPS-----SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV----TINFSY 480
                   +C+ S     S   F  +  L+F  C  +   P     VC       ++F Y
Sbjct: 609 ------PDSCLTSLNWLNSKNRFLNMRVLNFNQCHYITEIPD----VCGAPNLQELSFEY 658

Query: 481 CVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF--CKL 538
           C NLI                    ++  S+  L  L++LD  GC +L    TSF   KL
Sbjct: 659 CENLI--------------------KIHVSVGFLDKLKILDADGCSKL----TSFPPMKL 694

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
            SL  L L  C NLE FPEIL KME++  +    TPI ELPSS ++L  L+ + +++   
Sbjct: 695 TSLEELKLSFCANLECFPEILGKMENVTSLDIKDTPIKELPSSIQHLSRLQRIKLKNGGV 754

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLP---------SSVALSNMLRSLDSSHCKGLESF 649
           +  LP    +++ L Y+L        LP         SS+ + N +  LD SHC      
Sbjct: 755 I-QLPSTFFAMKELRYLLVNQCEGLLLPVENEGKEQMSSMVVENTIGYLDLSHC------ 807

Query: 650 PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
                         HISD   + +   +   S+++ LYL+GN+F  LPA I++   L  +
Sbjct: 808 --------------HISD---KFLQSGLPLFSNVKELYLNGNDFTILPACIQEFQFLTEL 850

Query: 710 HLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           +LE    L  +  +P  L+     +C  L S
Sbjct: 851 YLEACENLHEIGWIPPNLEVFSARECSSLTS 881



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 123/296 (41%), Gaps = 31/296 (10%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILA-AASAISQLPSSVALSN 633
           ITE+P      P L+ L  E C  L  +  ++G L+ L  + A   S ++  P     S 
Sbjct: 639 ITEIPDVC-GAPNLQELSFEYCENLIKIHVSVGFLDKLKILDADGCSKLTSFPPMKLTS- 696

Query: 634 MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF 693
            L  L  S C  LE FP   L  +  +  L I D  ++E+P  I +LS L+ + L     
Sbjct: 697 -LEELKLSFCANLECFPE-ILGKMENVTSLDIKDTPIKELPSSIQHLSRLQRIKLKNGGV 754

Query: 694 ESLPAIIKQMSQLRFIHLEDFNML---------QSLPELPL--CLKYLHLIDC----KML 738
             LP+    M +LR++ +     L         + +  + +   + YL L  C    K L
Sbjct: 755 IQLPSTFFAMKELRYLLVNQCEGLLLPVENEGKEQMSSMVVENTIGYLDLSHCHISDKFL 814

Query: 739 QSLPVLPFCLESLDLTGCNMLRSLPELPLCLQY------LNLEDCNMLRSLPELPLCLQL 792
           QS   L   ++ L L G         LP C+Q       L LE C  L  +  +P  L++
Sbjct: 815 QSGLPLFSNVKELYLNG----NDFTILPACIQEFQFLTELYLEACENLHEIGWIPPNLEV 870

Query: 793 LTVRNCNRLQSLPEILLCLQEL-DASVLEKLSKHSPDLQWAPESLKSAAICFEFTN 847
            + R C+ L S    +L  +EL +A   ++       +    E    ++ICF F +
Sbjct: 871 FSARECSSLTSECRSMLLNEELHEADGFKEFILPGTRIPEWFECTNESSICFWFRD 926


>gi|357449991|ref|XP_003595272.1| Heat shock protein [Medicago truncatula]
 gi|355484320|gb|AES65523.1| Heat shock protein [Medicago truncatula]
          Length = 1805

 Score =  315 bits (808), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 223/610 (36%), Positives = 317/610 (51%), Gaps = 76/610 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE---KLEVAGPN 76
           K+TLA+A+++  S +F+G CF++ +R  S    GL  LQ+ +LS  L E   ++      
Sbjct: 225 KSTLARAVYNHISDQFDGVCFLAGIR-ESAINHGLAQLQETLLSEILGEEDIRIRDVYRG 283

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           I    K R++R K+L+VLDDV++V Q++ L G  D FG GS+IVVTTRDK +L     E 
Sbjct: 284 IS-IIKRRLQRKKVLLVLDDVDKVNQIQVLAGGHDWFGPGSKIVVTTRDKHLLAIH--EI 340

Query: 137 KKIYRVNGLEFEEAFEHFCNFAF---KENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSL 193
             +Y V  L  E++ + F   AF   K + C  D+   S   VSY  G PL LEV+GS L
Sbjct: 341 LNLYEVKQLNHEKSLDLFNWHAFRNRKMDPCYSDI---SNRAVSYASGLPLALEVIGSHL 397

Query: 194 CLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFV 253
             K    W   L    R+   EIH+I   LK+S++ L    K IFLDIACFF   +  + 
Sbjct: 398 FGKSLDVWKSSLDKYERVLHKEIHEI---LKVSYDDLDDDQKGIFLDIACFFNSYEMSYA 454

Query: 254 ASIL---DDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQESEKEPGKRSRL 309
             +L     S  + + +L DKSL+ + GN  + MHD++Q+MGR+IVRQES  EPG+RSRL
Sbjct: 455 KEMLYLHGFSAENGIQVLTDKSLIKVDGNGCVRMHDLVQDMGREIVRQESTVEPGRRSRL 514

Query: 310 WDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEK 369
           W   +I  VL+ N GTD IE I ++L   K +    +AF  M NL++      +F     
Sbjct: 515 WFDDDIVHVLETNTGTDTIEVIIMNLCNDKEVQWSGKAFNKMKNLKILIIRSARF----- 569

Query: 370 LPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKV 429
                              G   LP  LR L W+ YP ++LP++F PKNL+ L+L     
Sbjct: 570 -----------------SRGPQKLPNSLRVLDWNGYPSQSLPADFNPKNLMILSL----- 607

Query: 430 EQPWEGEKACVPSS--IQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEF 487
                  ++C+ S   ++ F+ LS L FKGC+ L   PS    V    +    C NLI  
Sbjct: 608 ------PESCLVSFKLLKVFESLSFLDFKGCKLLTELPSLSGLVNLGALCLDDCTNLI-- 659

Query: 488 PQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL 547
                              +  SI  L  L +L  + CK+L+ +  +   L SL TL + 
Sbjct: 660 ------------------RIHESIGFLNKLVLLSSQRCKQLELLVPNI-NLPSLETLDIR 700

Query: 548 GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
           GC  L+ FPE+L  ME+++ +Y D+T I +LP S  NL GL  +F+ +C  L  LPD+I 
Sbjct: 701 GCSRLKSFPEVLGVMENIRYVYLDQTSIGKLPFSIRNLVGLRQMFLRECMSLTQLPDSIR 760

Query: 608 SLEYLYYILA 617
            L  L  I A
Sbjct: 761 ILPKLEIITA 770



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 1/140 (0%)

Query: 511 IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYS 570
           ++    L  LD +GCK L  +  S   L +L  L L  C NL    E +  +  L  + S
Sbjct: 618 LKVFESLSFLDFKGCKLLTELP-SLSGLVNLGALCLDDCTNLIRIHESIGFLNKLVLLSS 676

Query: 571 DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA 630
            R    EL     NLP LE L +  CS+L + P+ +G +E + Y+    ++I +LP S+ 
Sbjct: 677 QRCKQLELLVPNINLPSLETLDIRGCSRLKSFPEVLGVMENIRYVYLDQTSIGKLPFSIR 736

Query: 631 LSNMLRSLDSSHCKGLESFP 650
               LR +    C  L   P
Sbjct: 737 NLVGLRQMFLRECMSLTQLP 756



 Score = 43.9 bits (102), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 59/182 (32%)

Query: 674 PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN----MLQSLPELPLCLKY 729
           PQ++   +SL +L  +G   +SLPA              DFN    M+ SLPE   CL  
Sbjct: 573 PQKLP--NSLRVLDWNGYPSQSLPA--------------DFNPKNLMILSLPES--CL-- 612

Query: 730 LHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP--LCLQYLNLEDC-NMLRS---- 782
              +  K+L+    L F    LD  GC +L  LP L   + L  L L+DC N++R     
Sbjct: 613 ---VSFKLLKVFESLSF----LDFKGCKLLTELPSLSGLVNLGALCLDDCTNLIRIHESI 665

Query: 783 --------------------LPELPL-CLQLLTVRNCNRLQSLPEILLCLQELDASVLEK 821
                               +P + L  L+ L +R C+RL+S PE+L  ++ +    L++
Sbjct: 666 GFLNKLVLLSSQRCKQLELLVPNINLPSLETLDIRGCSRLKSFPEVLGVMENIRYVYLDQ 725

Query: 822 LS 823
            S
Sbjct: 726 TS 727


>gi|147799119|emb|CAN61627.1| hypothetical protein VITISV_024719 [Vitis vinifera]
          Length = 1520

 Score =  315 bits (807), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 233/697 (33%), Positives = 347/697 (49%), Gaps = 114/697 (16%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+AI+++ S++++ S F+ ++R  S+  G    LQ ++L   L EK      NI  
Sbjct: 229 KTTIAEAIYNKISYQYDSSSFLRNIREKSQ--GDTLQLQNELLHDILKEK-GFKISNIDE 285

Query: 80  ---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
                K  +   ++L++LDDV+++ QLK L  + D F   S I++T+RDK+VL ++  + 
Sbjct: 286 GVTMIKRCLNSKRVLVILDDVDDLKQLKHLAZKKDWFNAKSTIIITSRDKQVLXRYGVDT 345

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
              Y V   + +EA E F  +AF+EN   E     S +++ Y  G PL L++LG+SL  K
Sbjct: 346 P--YEVQKFDKKEAIELFSLWAFQENLPKEAYENLSYNMIEYADGLPLALKLLGASLFGK 403

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
           + S W   L+ L RI   EI+ +   L+ISF+ L    K IFLD+ACFF+G+ KDFV+ I
Sbjct: 404 KISEWESALYKLKRIPHMEINKV---LRISFDGLDDMDKEIFLDVACFFKGKSKDFVSRI 460

Query: 257 LDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
           L       +  L DK L++IS N ++MHD++Q+MG++I+RQE   + G+RSR+WD  +  
Sbjct: 461 LGPHAEYGIATLNDKCLITISKNMMDMHDLIQQMGKEIIRQECXDDLGRRSRIWD-SDAY 519

Query: 317 RVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTE 376
            VL  N GT +I+G+FLD+ K         +F  M  LRL K +    Y      S   +
Sbjct: 520 DVLTRNMGTRSIKGLFLDICKFP-TQFTKESFKQMDRLRLLKIHKDDEYGCISRFSRHLD 578

Query: 377 EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE 436
            +L +S+  LP   ++   +L Y HWD Y L +LP+NF  K+LVEL LR S ++Q W G 
Sbjct: 579 GKL-FSEDHLPRDFEFPSYELTYFHWDGYSLESLPTNFHAKDLVELILRGSNIKQLWRGN 637

Query: 437 KACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR 496
           K                              LH    V IN S+ V+L E P  S     
Sbjct: 638 K------------------------------LHNKLNV-INLSHSVHLTEIPDFSS---- 662

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
                     VP       +LE+L L+GC +L+ +     K + L TL    C  L+ FP
Sbjct: 663 ----------VP-------NLEILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFP 705

Query: 557 EILEKMEHLKRIYSDRTPITELPSS--FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
           EI   M  L+ +    T I ELPSS  F +L  L++L    CSKL+ +P ++  L     
Sbjct: 706 EIKGNMRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIPTDVCCL----- 760

Query: 615 ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP 674
                             + L  LD S+C  +E                         IP
Sbjct: 761 ------------------SSLEVLDLSYCNIMEG-----------------------GIP 779

Query: 675 QEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
            +I  LSSL  L L  N+F S+PA I ++S+L+ + L
Sbjct: 780 SDICRLSSLXELNLKSNDFRSIPATINRLSRLQTLDL 816



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/251 (37%), Positives = 141/251 (56%), Gaps = 10/251 (3%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S ++E+P  IE   +L+ L LRGCK LK + +S C+ +SL TL   GC  LE FPEILE 
Sbjct: 1058 SDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILED 1116

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAAS 620
            ME LK++    + I E+PSS + L GL+ L +  C  L NLP++I +L  L  + + +  
Sbjct: 1117 MEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCP 1176

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESF--PRTFLLGLSAMGLLHISDYAVREIPQEIA 678
             + +LP ++     L+SL+  + K  +S       L GL ++ +L + +  +REIP  I 
Sbjct: 1177 ELKKLPENLG---RLQSLEILYVKDFDSMNCQXPSLSGLCSLRILRLINCGLREIPSGIC 1233

Query: 679  YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC--- 735
            +L+SL+ L L GN F S+P  I Q+ +L  ++L    +LQ +PE P  L  L    C   
Sbjct: 1234 HLTSLQCLVLMGNQFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLXTLVAHQCTSL 1293

Query: 736  KMLQSLPVLPF 746
            K+  SL   PF
Sbjct: 1294 KISSSLLWSPF 1304



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 107/212 (50%), Gaps = 6/212 (2%)

Query: 444  IQNFKYLSALSFKGCQSLRSFPSNL-HFVCPVTINFSYCVNLIEFPQISGKV---TRLYL 499
            I+N   L  L  +GC+ L+S PS++  F    T+    C  L  FP+I   +    +L L
Sbjct: 1066 IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDL 1125

Query: 500  GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
            G SAI+E+PSSI+ L  L+ L+L  CK L  +  S C L SL TL +  C  L+  PE L
Sbjct: 1126 GGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENL 1185

Query: 560  EKMEHLKRIY-SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
             +++ L+ +Y  D   +     S   L  L +L + +C  L  +P  I  L  L  ++  
Sbjct: 1186 GRLQSLEILYVKDFDSMNCQXPSLSGLCSLRILRLINCG-LREIPSGICHLTSLQCLVLM 1244

Query: 619  ASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
             +  S +P  ++  + L  L+ SHCK L+  P
Sbjct: 1245 GNQFSSIPDGISQLHKLIVLNLSHCKLLQHIP 1276



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 32/236 (13%)

Query: 575  ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
            +  LPSS      L  L  E CS+L++ P+ +  +E L  +    SAI ++PSS+     
Sbjct: 1083 LKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRG 1142

Query: 635  LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY-AVREIPQEIAYLSSLEILYLSGNNF 693
            L+ L+ ++CK L + P + +  L+++  L I     ++++P+ +  L SLEILY+   +F
Sbjct: 1143 LQDLNLAYCKNLVNLPES-ICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYVK--DF 1199

Query: 694  ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC----LE 749
            +S+      +S L                    L+ L LI+C  L+ +P    C    L+
Sbjct: 1200 DSMNCQXPSLSGL------------------CSLRILRLINCG-LREIPS-GICHLTSLQ 1239

Query: 750  SLDLTGCNMLRSLPELPLCLQ---YLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQ 802
             L L G N   S+P+    L     LNL  C +L+ +PE P  L  L    C  L+
Sbjct: 1240 CLVLMG-NQFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLXTLVAHQCTSLK 1294



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 131/315 (41%), Gaps = 43/315 (13%)

Query: 647 ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
           +  PR F      +   H   Y++  +P    +   L  L L G+N + L    K  ++L
Sbjct: 585 DHLPRDFEFPSYELTYFHWDGYSLESLPTNF-HAKDLVELILRGSNIKQLWRGNKLHNKL 643

Query: 707 RFIHLEDFNMLQSLPELPLC--LKYLHLIDCKMLQSLPVLPF---CLESLDLTGCNMLRS 761
             I+L     L  +P+      L+ L L  C  L+ LP   +    L++L    C+ L+ 
Sbjct: 644 NVINLSHSVHLTEIPDFSSVPNLEILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKR 703

Query: 762 LPELPLCLQYLNLEDCNMLRSLPELP--------LCLQLLTVRNCNRLQSLPEILLCLQE 813
            PE+   ++ L   D +   ++ ELP          L++L+ R C++L  +P  + CL  
Sbjct: 704 FPEIKGNMRKLRELDLSGT-AIEELPSSSSFGHLKALKILSFRGCSKLNKIPTDVCCLSS 762

Query: 814 LDASVLEKLSKHSPDLQWAP--ESLKSAAICFEFTNCLKLNGKANN-KILADSLLRIRHM 870
           L+            DL +    E    + IC   ++  +LN K+N+ + +  ++ R+  +
Sbjct: 763 LEV----------LDLSYCNIMEGGIPSDIC-RLSSLXELNLKSNDFRSIPATINRLSRL 811

Query: 871 AIASLRLGYEMAINE-------KLSELRGSLIVLPG-SEIPDWFSNQSSGSSICIQLPPH 922
               L   +   +N+             G  IVLPG S +P+W   +       I+LP +
Sbjct: 812 QTLDLHGAFVQDLNQCSQNCNDSAYHGNGICIVLPGHSGVPEWMMXRRX-----IELPQN 866

Query: 923 SSCRN-LIGFAFCAV 936
               N  +GFA C V
Sbjct: 867 WHQDNEFLGFAICCV 881



 Score = 40.8 bits (94), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 65/140 (46%), Gaps = 37/140 (26%)

Query: 711  LEDFNMLQSLP--ELPLCLKYLHLIDCKMLQSLP--VLPF-CLESLDLTGCNMLRSLPEL 765
             ED +M + LP  E PL L  L L  CK L+SLP  +  F  L +L   GC+ L S PE+
Sbjct: 1055 FEDSDM-KELPIIENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEI 1113

Query: 766  --------------------PLC------LQYLNLEDCNMLRSLPELPLC----LQLLTV 795
                                P        LQ LNL  C  L +LPE  +C    L+ LT+
Sbjct: 1114 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPE-SICNLTSLKTLTI 1172

Query: 796  RNCNRLQSLPEILLCLQELD 815
            ++C  L+ LPE L  LQ L+
Sbjct: 1173 KSCPELKKLPENLGRLQSLE 1192


>gi|357469529|ref|XP_003605049.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506104|gb|AES87246.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1352

 Score =  315 bits (807), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 234/695 (33%), Positives = 345/695 (49%), Gaps = 90/695 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNS-ETAGGLEHLQKQML 62
           SD V ++GI+G GGIGKTT A  I+++    FE +CF+ +VR  S E   GLE LQ+ +L
Sbjct: 204 SDVVCMLGIYGAGGIGKTTFALDIYNKIRRRFEAACFLGNVREKSNENTRGLEDLQRTLL 263

Query: 63  STTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           S    E   + G      +  K R+ R ++L++LDDV+ V QLK L G  D FG GSRI+
Sbjct: 264 SEMGEETQTMMGSTYRGSSEIKRRLARKRVLLILDDVDSVKQLKSLAGGHDWFGSGSRII 323

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           VTTRD  VL K    + K Y++  L   E+ E FC +AF  +   E+    S   +SY +
Sbjct: 324 VTTRDIDVLHK-HDVKIKTYKLEELNNHESIELFCMYAFNMSRPAENFAKISTQAISYAQ 382

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PLVL V+GS+L  K    W   L    ++ ++EI  +   L+IS+  L+   + +FLD
Sbjct: 383 GIPLVLTVIGSNLKGKSIHEWHIELQKYRKVPDAEIQSV---LEISYKGLSDLDQKVFLD 439

Query: 241 IACFFEGEDKDFVASILDD-SESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQE 298
           IACFF+GE  D+V  ILD      V+ + + K L+ +  N  L MHD++Q+MGR+I+R+E
Sbjct: 440 IACFFKGERWDYVKRILDACGFYPVIRVFVSKCLLIVDENGCLEMHDLIQDMGREIIRKE 499

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGIN-LDPRAFTNMSNLRLF 357
           S   PG+RSRLW  K+   VLK N G+ A+EGI L   K + ++  D  AF  M NLR+ 
Sbjct: 500 STSNPGERSRLWSHKDALDVLKGNLGSTAVEGIMLHPPKQEKVDHWDDAAFKKMKNLRI- 558

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
                                L        +G  YLP  LR L W  YP +  P NF P 
Sbjct: 559 ---------------------LIVRNTVFSSGPSYLPNSLRLLDWKCYPSKDFPPNFYPY 597

Query: 418 NLVELNLRCSKV--EQPWE-------------GEKACVPS-------------------- 442
            +V+  L  S +  ++P++                  +P+                    
Sbjct: 598 KIVDFKLPHSSMILKKPFQIFEDLTFINLSYSQSITQIPNLSGATKLRVFTLDNCHKLVM 657

Query: 443 ---SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR--- 496
              S+     L  LS  GC  L+SF   ++      I+F++C     FP +  K+ R   
Sbjct: 658 FDKSVGFMPNLVYLSASGCTELKSFVPKMYLPSLQVISFNFCKKFEHFPHVIQKMDRPLK 717

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
           +++  +AI+E+P SI  LT LE++D+  CK LK +S+SF  L  LVTL + GC  L    
Sbjct: 718 IHMINTAIKEIPKSIGNLTGLELMDMSICKGLKDLSSSFLLLPKLVTLKIDGCSQLRTSF 777

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEV-LFVEDCSKLDNLPDNIGSLEYLYYI 615
           +  ++       Y +   I  L  S  NL   +V   +E+  KL++L      + + +++
Sbjct: 778 QRFKERNSGANGYPN---IETLHFSGANLSNDDVNAIIENFPKLEDL-----KVFHNWFV 829

Query: 616 LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
                    LP+ +  S  L+SLD S CK L   P
Sbjct: 830 --------SLPNCIRGSLHLKSLDVSFCKNLTEIP 856


>gi|357513933|ref|XP_003627255.1| NBS resistance protein [Medicago truncatula]
 gi|355521277|gb|AET01731.1| NBS resistance protein [Medicago truncatula]
          Length = 1079

 Score =  315 bits (807), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 221/611 (36%), Positives = 319/611 (52%), Gaps = 70/611 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLE-HLQKQML 62
           S+ V+++GIWGM GIGKTT+A+ +F +   ++E   F+++VR  SE        L+K +L
Sbjct: 231 SEDVRVLGIWGMPGIGKTTIAEEVFRRLRSKYESCYFMANVREESEGCRTNSLRLRKNLL 290

Query: 63  STTLSEK-LEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           ST L E+ L+    N +P   K+R+ RMK+LIVLDDV +  QL+ LIG +D  G GSRI+
Sbjct: 291 STLLEEEDLKDDMINGLPPLVKKRLSRMKVLIVLDDVKDAEQLEVLIGIVDWLGPGSRII 350

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAF-KENHCPEDLNWHSRSVVSYT 179
           +TTRDK+VL    G+   IY V  L+  E+F+ F   AF K  H   +    S+ +V YT
Sbjct: 351 ITTRDKQVLA---GKIDDIYEVEPLDSAESFQLFNLNAFTKHEHLEMEYYELSKKMVDYT 407

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            G PLVL+ L + L  K K+ W     +L      +I +++D+ ++ +  L    K IFL
Sbjct: 408 AGVPLVLKALANLLRGKDKAIWETQSRNLKI---EQIENVHDVFRLIYTNLDYYEKIIFL 464

Query: 240 DIACFFEGEDKDFVASILDD-----SESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQ 293
           DIACFF+G         L       S S  LD L DK+LV+IS  N ++MHDI+QE   +
Sbjct: 465 DIACFFDGLKLKLELINLLLKDRHYSVSTKLDRLKDKALVTISQENIVSMHDIIQETAWE 524

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IV QES +EPG RSRL DP +I  +L  +KG ++I  + + LS+IK + L PR F  MS 
Sbjct: 525 IVHQESVEEPGSRSRLLDPDDIYHILNDDKGGESIRSMAIRLSEIKELQLSPRVFAKMSK 584

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           L+    Y              T+E  +  ++ LP GL++LP +LRYL W+ YPL +LPS 
Sbjct: 585 LKFLDIY--------------TKESKNEGRLSLPRGLEFLPNELRYLRWEYYPLESLPSK 630

Query: 414 FKPKNLVELNLRCSKVEQPWEGEK------------------------------------ 437
           F  +NLV L+L  S++++ W G K                                    
Sbjct: 631 FSAENLVRLSLPYSRLKKLWHGVKDLVNLNVLILHSSTLLTELPDFSKATSLAVLDLQFC 690

Query: 438 ---ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
                V  S+ + K L  L   GC SL S  SN H      ++   C  L EF   S  +
Sbjct: 691 VGLTSVHPSVFSLKNLEKLDLSGCISLTSLQSNTHLSSLSYLSLYNCTALKEFSVTSKHM 750

Query: 495 TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
           + L L  ++I+E+PSSI   + L  L+L G   ++ +  S   L  L  L    C  L+ 
Sbjct: 751 SVLNLDGTSIKELPSSIGLQSKLTFLNL-GRTHIESLPKSIKNLTRLRQLGFFYCRELKT 809

Query: 555 FPEILEKMEHL 565
            PE+ + +E L
Sbjct: 810 LPELPQSLEML 820



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 7/175 (4%)

Query: 568 IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLP 626
           I    T +TELP  F     L VL ++ C  L ++  ++ SL+ L  + L+   +++ L 
Sbjct: 663 ILHSSTLLTELPD-FSKATSLAVLDLQFCVGLTSVHPSVFSLKNLEKLDLSGCISLTSLQ 721

Query: 627 SSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL 686
           S+  LS++       +C  L+ F  T       M +L++   +++E+P  I   S L  L
Sbjct: 722 SNTHLSSLSYLS-LYNCTALKEFSVTS----KHMSVLNLDGTSIKELPSSIGLQSKLTFL 776

Query: 687 YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
            L   + ESLP  IK +++LR +       L++LPELP  L+ L ++ C  LQ++
Sbjct: 777 NLGRTHIESLPKSIKNLTRLRQLGFFYCRELKTLPELPQSLEMLAVVGCVSLQNV 831



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 150/373 (40%), Gaps = 87/373 (23%)

Query: 547 LGCLNLEHFPEILEKM------EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
           L  L  E++P  LE +      E+L R+    + + +L    ++L  L VL +   + L 
Sbjct: 614 LRYLRWEYYP--LESLPSKFSAENLVRLSLPYSRLKKLWHGVKDLVNLNVLILHSSTLLT 671

Query: 601 NLPDNIGSLEYLYYILAAASAISQL-PSSVALSNMLRSLDSSHCKGLESF-PRTFLLGLS 658
            LPD   +       L     ++ + PS  +L N L  LD S C  L S    T L  LS
Sbjct: 672 ELPDFSKATSLAVLDLQFCVGLTSVHPSVFSLKN-LEKLDLSGCISLTSLQSNTHLSSLS 730

Query: 659 AMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
            + L + +  A++E      ++S   +L L G + + LP+ I   S+L F++L   +   
Sbjct: 731 YLSLYNCT--ALKEFSVTSKHMS---VLNLDGTSIKELPSSIGLQSKLTFLNLGRTH--- 782

Query: 719 SLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCN 778
                                        +ESL  +  N+ R        L+ L    C 
Sbjct: 783 -----------------------------IESLPKSIKNLTR--------LRQLGFFYCR 805

Query: 779 MLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKS 838
            L++LPELP  L++L V  C  LQ++        E  ++              A E LK 
Sbjct: 806 ELKTLPELPQSLEMLAVVGCVSLQNV--------EFRST--------------ASEQLKE 843

Query: 839 AAICFEFTNCLKLNGKANNKILADSLLRI-----RHMAIASLRLGYEMAINEKLSELRGS 893
                 F NCLKLN  +   I  ++ + +     RH++     L ++    +    L  S
Sbjct: 844 KRKKVAFWNCLKLNEPSLKAIELNAQINMISFSYRHIS----ELDHDNRDQDHDQNLNHS 899

Query: 894 LIVLPGSEIPDWF 906
           + + PGS+IP+W 
Sbjct: 900 MYLYPGSKIPEWL 912


>gi|227438159|gb|ACP30569.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1173

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 283/972 (29%), Positives = 454/972 (46%), Gaps = 156/972 (16%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHE---FEGSCFVSDVRG-------NSETA 51
            D  + V+++GIWG  GIGKTT+A+ +F Q S     F+ + FV +V+        +S+  
Sbjct: 226  DLKEEVRMIGIWGPPGIGKTTIARFLFHQLSSNNDNFQHTVFVENVKAMYTTIPVSSDDY 285

Query: 52   GGLEHLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGE 109
                HLQ+  LS  + + +E     IPH    ++ ++  K+L+VLDDVN   QL  +  E
Sbjct: 286  NAKLHLQQSFLSKIIKKDIE-----IPHLGVAQDTLKDKKVLVVLDDVNRSVQLDAMAEE 340

Query: 110  LDQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLN 169
               FG GSRI+ TT+D+ +L+     +  +Y V     +EA + FC +AF++        
Sbjct: 341  TGWFGNGSRIIFTTQDRHLLKAHGIND--LYEVGSPSTDEALQIFCTYAFRQKSPKAGFE 398

Query: 170  WHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIH-DIYDILKISFN 228
              SR V       PL L+V+GS L    K  W   L  L     + +H DI   LK S++
Sbjct: 399  DLSREVTKLAGDLPLGLKVMGSCLRGLSKEEWKNKLPSL----RNNLHGDIESALKFSYD 454

Query: 229  KLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHD 285
             L    K++FL IACFF  E  + V  IL  +  +V   + +L +KSL+S +  ++ MHD
Sbjct: 455  ALRREDKNLFLHIACFFNHEKIEIVEHILARAFLNVRQGIHVLTEKSLISTNSEYVVMHD 514

Query: 286  ILQEMGRQIVRQESE-----KEPGKRSRLWDPKEISRVLKHN-KGTDAIEGIFLDLSKIK 339
            +L ++GR+IVR  S      +EPG+R  L D ++I  VL  +  GT ++ GI L LSK +
Sbjct: 515  LLAQLGREIVRNVSTSEHLTREPGQRQFLVDARDICEVLSDDTAGTSSVIGINLKLSKAE 574

Query: 340  -GINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLR 398
              ++    AF  M+NL+  +                      Y+ +  P  L+ + +K+R
Sbjct: 575  ERLHTSESAFERMTNLQFLRIGS------------------GYNGLYFPQSLNSISRKIR 616

Query: 399  YLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGC 458
             L W+ +P+  LPSNF P+ LV+L ++ SK+++ W+G        IQ  + L  +  +  
Sbjct: 617  LLEWNDFPMTCLPSNFSPQFLVKLCMQGSKLKKLWDG--------IQPLRNLKWMDLRSS 668

Query: 459  QSLRSFP-----SNLHFVCPVTINFSYCVNLIEFPQISGKVTRL----YLGQSAIEEVPS 509
            ++L+  P     +NL ++C        C +L   P   G  T L        + +  +PS
Sbjct: 669  KNLKKIPDLSTATNLTYLC-----LRGCSSLENLPSSIGNATNLLNLDLSDCTRLVNLPS 723

Query: 510  SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY 569
            SI    +L+  DL+ C  L  +  S     +L +L L GC +L+  P  +    +L+ +Y
Sbjct: 724  SIWNAINLQTFDLKDCSSLVELPLSIGNAINLKSLNLGGCSSLKDLPSSIGNAPNLQNLY 783

Query: 570  SDR-TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPS 627
             D  + +  LPSS EN   L+VL ++ CS L  LP  IG+   L Y+ L+  S++ +LPS
Sbjct: 784  LDYCSSLVNLPSSIENAINLQVLDLKYCSSLVELPIFIGNATNLRYLDLSGCSSLVELPS 843

Query: 628  SVALSNMLRSLDSSHCKGLESFPRTF-LLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL 686
            SV   + L  L    C  L+  P    ++ L  + L   S  ++++ P EI+  ++++ L
Sbjct: 844  SVGKLHKLPKLTMVGCSKLKVLPININMVSLRELDLTGCS--SLKKFP-EIS--TNIKHL 898

Query: 687  YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF 746
            +L G + E +P+ IK    L  + +     L+  P     +  LH+ D            
Sbjct: 899  HLIGTSIEEVPSSIKSXXHLEHLRMSYSQNLKKSPHAXXTITELHITDT----------- 947

Query: 747  CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPE 806
              E LD+   + ++ L  L   + Y     C  L SLP+LP  L  L   NC        
Sbjct: 948  --EXLDIG--SWVKELSHLGRLVLY----GCKNLVSLPQLPGSLLDLDASNCE------- 992

Query: 807  ILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLR 866
                L+ LD+S+                +L S    F F NC KLN +A           
Sbjct: 993  ---SLERLDSSL---------------HNLNSTT--FRFINCFKLNQEA----------- 1021

Query: 867  IRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCR 926
            I  ++    RL                + VLPG E+P  F+ ++ G+ + ++L   S  R
Sbjct: 1022 IHLISQTPCRL----------------VAVLPGGEVPACFTYRAFGNFVTVELDGRSLPR 1065

Query: 927  NLIGFAFCAVLD 938
            +   F  C +LD
Sbjct: 1066 SK-KFRACILLD 1076


>gi|356569977|ref|XP_003553169.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 833

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 207/552 (37%), Positives = 296/552 (53%), Gaps = 82/552 (14%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH--LQKQMLST 64
           V+ +GIWGMGGIGKT LA  ++D+ SHEFEGS F+S+V   +E +  LE+       +ST
Sbjct: 211 VRTLGIWGMGGIGKTALATTLYDKLSHEFEGSSFLSNV---NEKSDKLENHCFGNSDMST 267

Query: 65  TLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
                               +R  K LIVLDDV     L++L  + D    GSR++VTTR
Sbjct: 268 --------------------LRGKKALIVLDDVATSEHLEKLKVDYDFLEPGSRVIVTTR 307

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           ++ +L    G   +IY+V  L    + + FC   F E    E     S  V+SY KG PL
Sbjct: 308 NREIL----GPNDEIYQVKELSSHHSVQLFCLTVFGEKQPKEGYEDLSERVLSYCKGIPL 363

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L+V+G+SL  K K  W   L  L +I   EIH    +LK+S++ L    K IFLDIACF
Sbjct: 364 ALKVMGASLRRKSKEAWESELRKLQKISSMEIH---TVLKLSYDGLDHSQKDIFLDIACF 420

Query: 245 FEGEDKDFVASILDDSE---SDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESE 300
           F+G ++D+V  +LD  +   +  +++L+DK+L++IS GN + MHD++QEMG +IVRQE  
Sbjct: 421 FKGRERDWVTRVLDAFDFFAASGIEVLLDKALITISEGNHIEMHDLIQEMGWEIVRQECI 480

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSNLRLFKF 359
           K+PG++SRLW  +E+  +LK+N+GTD +EGI L L K+ + + L       M+NLR  +F
Sbjct: 481 KDPGRQSRLWRQEEVQNILKYNRGTDVVEGIILSLRKLTEALRLSFDFLAKMTNLRFLQF 540

Query: 360 YVPKFYEIEKLPSMSTEEQLSY-SKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
           Y               +    Y SKV +P G + LP KLRYLHW+ + L +LP NF  + 
Sbjct: 541 Y---------------DGWDDYGSKVPVPTGFESLPDKLRYLHWEGFCLESLPLNFCAEQ 585

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
           LVEL +  SK+++ W+G        +QN   L  +  +G + L   P          +N 
Sbjct: 586 LVELYMPFSKLKKLWDG--------VQNLVNLKIIGLQGSKDLIEVPDLSKAEKLEIVNL 637

Query: 479 SYCVNLI---------------------EFPQISGKVTRLYLGQSAIEEVPSSIECLTDL 517
           S+CV+L+                     EF   S ++T L L  +AI E+P SI     L
Sbjct: 638 SFCVSLLQLHVYSKSLQGLNAKNCSSLKEFSVTSEEITELNLADTAICELPPSIWQKKKL 697

Query: 518 EVLDLRGCKRLK 529
             L L GCK LK
Sbjct: 698 AFLVLNGCKNLK 709


>gi|227438283|gb|ACP30631.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1241

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 226/689 (32%), Positives = 355/689 (51%), Gaps = 79/689 (11%)

Query: 10  VGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK 69
           +G+ GM GIGKTTL K +++++  EF    F+ DVR   +       +  + L      K
Sbjct: 234 IGVVGMPGIGKTTLTKMLYEKWRGEFLRCVFLHDVRKLWKDCKMNRDIFMRELLKDDDVK 293

Query: 70  LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVL 129
            EV+  + P   K  +   K L+VLD+V++  Q++ L+GE D   +GSRI +TT DK V+
Sbjct: 294 QEVSDLS-PESLKALLLSKKSLVVLDNVSDKSQIETLLGECDWIKRGSRIFITTSDKSVI 352

Query: 130 EKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH--SRSVVSYTKGNPLVLE 187
           +    +  ++ R++G    ++F++F  FAF    CP + N+   SR  V Y KGNPL L+
Sbjct: 353 KGVVDDTYEVLRLSG---RDSFQYFSYFAFSGKLCPPEDNFLNLSRLFVDYAKGNPLALK 409

Query: 188 VLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEG 247
           +LG  L  K ++HW + L DL    +S    I  +L+IS+N L    K +FLD+ACFF  
Sbjct: 410 ILGVELSEKDETHWEETLRDL---AQSPNKTIQSVLQISYNGLGQFHKDVFLDVACFFRS 466

Query: 248 EDKDFVASILDDSESDVLDI------LIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
            D+++V  +++  ++D++D       L  K L++ISG  + MHD+L   G+++  Q S  
Sbjct: 467 GDENYVRCLVESCDTDLVDAASEIKDLASKFLINISGGRVEMHDLLYTFGKELGSQGSR- 525

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIK-GINLDPRAFTNMSNLRLFKFY 360
                 RLW+ K +   LK  KG  ++ GIFLD+S++K  + LD   FT M NLR  KFY
Sbjct: 526 ------RLWNHKGVVGALKKRKGAGSVRGIFLDMSELKEKLPLDRCTFTEMRNLRYLKFY 579

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
             + +           E  +  K+  P GLD+   ++RYL W  +PL+ LP +F PKNL 
Sbjct: 580 SSRCHR----------ECEADCKLNFPEGLDFPLDEVRYLFWLKFPLKKLPKDFNPKNLT 629

Query: 421 ELNLRCSKVEQPWEGEK----------------------------------AC-----VP 441
           +LN+  S++E+ WEG K                                   C     +P
Sbjct: 630 DLNMSFSEIEELWEGVKDTPKLKWVDLSHSSKLCNLTGLLNAESLQRLNLEGCTSLEELP 689

Query: 442 SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ 501
             ++  K L  L+ +GC SLR  P +++ +   T+  + C +L  F  +S  +  L+L  
Sbjct: 690 REMERMKCLVFLNMRGCTSLRVLP-HMNLISMKTLILTNCSSLQTFRVVSDNLETLHLDG 748

Query: 502 SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
           SAI ++P+++  L  L VL+L+ CK L  +     KL++L  L+L GC  L+ FP  +E 
Sbjct: 749 SAIGQLPTNMWKLQRLIVLNLKDCKMLVELPECLGKLKALQELVLSGCSKLKTFPIRIEN 808

Query: 562 MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASA 621
           M+ L+ +  D T IT++P   +    L    VED  +L    + I SL+ L   L+    
Sbjct: 809 MKSLQLLLLDGTSITDMPKILQ----LNSSKVEDWPELRRGMNGISSLQRL--CLSGNDI 862

Query: 622 ISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           I+ L   ++L   L+ LD   CK L S P
Sbjct: 863 ITNLRIDISLLCHLKLLDLKFCKNLTSIP 891



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 164/620 (26%), Positives = 262/620 (42%), Gaps = 94/620 (15%)

Query: 439  CVPSSIQNFKYL---SALSFKGCQS--LRSFPSNLHF-VCPVTINFSYCVNLIEFPQI-- 490
            C  + ++N +YL   S+   + C++    +FP  L F +  V   F     L + P+   
Sbjct: 565  CTFTEMRNLRYLKFYSSRCHRECEADCKLNFPEGLDFPLDEVRYLFWLKFPLKKLPKDFN 624

Query: 491  SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
               +T L +  S IEE+   ++    L+ +DL    +L  + T      SL  L L GC 
Sbjct: 625  PKNLTDLNMSFSEIEELWEGVKDTPKLKWVDLSHSSKLCNL-TGLLNAESLQRLNLEGCT 683

Query: 551  NLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
            +LE  P  +E+M+ L  +     T +  LP    NL  ++ L + +CS L        +L
Sbjct: 684  SLEELPREMERMKCLVFLNMRGCTSLRVLPHM--NLISMKTLILTNCSSLQTFRVVSDNL 741

Query: 610  EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA 669
            E L+      SAI QLP+++     L  L+   CK L   P   L  L A+  L +S  +
Sbjct: 742  ETLHL---DGSAIGQLPTNMWKLQRLIVLNLKDCKMLVELPEC-LGKLKALQELVLSGCS 797

Query: 670  -VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLK 728
             ++  P  I  + SL++L L G +   +P I+    QL    +ED+      PEL   + 
Sbjct: 798  KLKTFPIRIENMKSLQLLLLDGTSITDMPKIL----QLNSSKVEDW------PELRRGMN 847

Query: 729  YLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPL 788
             +       LQ L     CL   D+     LR    L   L+ L+L+ C  L S+P LP 
Sbjct: 848  GI-----SSLQRL-----CLSGNDII--TNLRIDISLLCHLKLLDLKFCKNLTSIPLLPP 895

Query: 789  CLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNC 848
             +++L    C +L+++   +  L+ +     EK+  HS                F FTNC
Sbjct: 896  NVEILDAHGCGKLKTVATPMAILKHM-----EKV--HSK---------------FIFTNC 933

Query: 849  LKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSN 908
              L   A N I   +    +   + +LR   E   +E L      +   PGSE+P WF +
Sbjct: 934  NSLEQAAKNSI---TTYAQKKSQLDALRCYKEGHASEALF-----ITSFPGSEVPSWFDH 985

Query: 909  QSSGSSICIQLPPHSSCRNLIGFAFCAV------LDSKKVDSDCFRYFYVSFQFDLEIKT 962
            +  GS++ ++ PPH     L     CAV      ++S  ++  C        +F  E+ T
Sbjct: 986  RMIGSTLKLKFPPHWCDNRLSTIVLCAVVAFQNEINSFSIECTC--------EFKNELGT 1037

Query: 963  LSETKHVDLGYNSRYIEDL-IDSDRVILGFKPCLNV-----GFPDGYH--HTIATFKFFA 1014
             +    +       +IE   IDSD V +G+    ++     G P+      T A+ KF  
Sbjct: 1038 CTRFSSI---LGGGWIEPRKIDSDHVFIGYTSSSHITNHVEGSPEHQKCVPTEASIKFKV 1094

Query: 1015 ERKFYKIKRCGLCPVYANPS 1034
                 +I  CGL  VY  P+
Sbjct: 1095 IDGAGEIVNCGLSLVYEEPN 1114


>gi|357449971|ref|XP_003595262.1| Heat shock protein [Medicago truncatula]
 gi|355484310|gb|AES65513.1| Heat shock protein [Medicago truncatula]
          Length = 1541

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 224/610 (36%), Positives = 317/610 (51%), Gaps = 76/610 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE---KLEVAGPN 76
           K+TLA+A+++  S +F+G CF++ +R  S    GL  LQ+ +LS  L E   ++      
Sbjct: 226 KSTLARAVYNHISDQFDGVCFLAGIR-ESAINHGLAQLQETLLSEILGEEDIRIRDVYRG 284

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           I    K R++R K+L+VLDDV++V Q++ L G  D FG GS+IVVTTRDK +L     E 
Sbjct: 285 IS-IIKRRLQRKKVLLVLDDVDKVKQIQVLAGGHDWFGPGSKIVVTTRDKHLLAIH--EI 341

Query: 137 KKIYRVNGLEFEEAFEHFCNFAF---KENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSL 193
             +Y V  L  E++ + F   AF   K + C  D+   S   VSY  G PL LEV+GS L
Sbjct: 342 LNLYEVKQLNHEKSLDLFNWHAFRNRKMDPCYSDM---SNRAVSYASGLPLALEVIGSHL 398

Query: 194 CLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFV 253
             K    W   L    R+   EIH+I   LK+S++ L    K IFLDIACFF   +  + 
Sbjct: 399 FGKSLDVWKSSLDKYERVLHKEIHEI---LKVSYDDLDDDQKGIFLDIACFFNSYEMSYA 455

Query: 254 ASIL---DDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQESEKEPGKRSRL 309
             +L     S  + + +L DKSL+ I  N  + MHD++Q+MGR+IVRQES  EPG+RSRL
Sbjct: 456 KELLYLHGFSAENGIQVLTDKSLIKIDANGCVRMHDLVQDMGREIVRQESTVEPGRRSRL 515

Query: 310 WDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEK 369
           W   +I  VL+ N GTD IE I ++L   K +    +AFT M NL++      +F     
Sbjct: 516 WYDDDIVHVLETNMGTDTIEVIIINLCNDKEVQWSGKAFTKMKNLKILIIRSARF----- 570

Query: 370 LPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKV 429
                              G   LP  LR L W+ YP ++LP++F PKNL+ L+L     
Sbjct: 571 -----------------SRGPQKLPNSLRVLDWNGYPSQSLPADFNPKNLMILSL----- 608

Query: 430 EQPWEGEKACVPSS--IQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEF 487
                  ++C+ S   ++ F+ LS L F+GC+ L   PS    V    +    C NLI  
Sbjct: 609 ------PESCLVSFKLLKVFESLSFLDFEGCKLLTELPSLSGLVNLGALCLDDCTNLI-- 660

Query: 488 PQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL 547
                              +  SI  L  L +L  + CK+L+ +  +   L SL TL + 
Sbjct: 661 ------------------RIHKSIGFLNKLVLLSSQRCKQLELLVPNI-NLPSLETLDIR 701

Query: 548 GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
           GC  L+ FPE+L  ME+++ +Y D+T I +LP S  NL GL  LF+ +C  L  LPD+I 
Sbjct: 702 GCSRLKSFPEVLGVMENIRYVYLDQTSIGKLPFSIRNLVGLRQLFLRECMSLTQLPDSIR 761

Query: 608 SLEYLYYILA 617
            L  L  I A
Sbjct: 762 ILPKLEIITA 771



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 59/182 (32%)

Query: 674 PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN----MLQSLPELPLCLKY 729
           PQ++   +SL +L  +G   +SLPA              DFN    M+ SLPE   CL  
Sbjct: 574 PQKLP--NSLRVLDWNGYPSQSLPA--------------DFNPKNLMILSLPES--CL-- 613

Query: 730 LHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP--LCLQYLNLEDC-NMLRS---- 782
              +  K+L+    L F    LD  GC +L  LP L   + L  L L+DC N++R     
Sbjct: 614 ---VSFKLLKVFESLSF----LDFEGCKLLTELPSLSGLVNLGALCLDDCTNLIRIHKSI 666

Query: 783 --------------------LPELPL-CLQLLTVRNCNRLQSLPEILLCLQELDASVLEK 821
                               +P + L  L+ L +R C+RL+S PE+L  ++ +    L++
Sbjct: 667 GFLNKLVLLSSQRCKQLELLVPNINLPSLETLDIRGCSRLKSFPEVLGVMENIRYVYLDQ 726

Query: 822 LS 823
            S
Sbjct: 727 TS 728


>gi|224104273|ref|XP_002333965.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222839252|gb|EEE77603.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1033

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 261/765 (34%), Positives = 389/765 (50%), Gaps = 121/765 (15%)

Query: 15  MGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE--KLEV 72
           MGGIGKTT+A+ ++D+   +FEGS F+++VR      GG   LQ+Q+LS  L E   L+ 
Sbjct: 1   MGGIGKTTVARVLYDKIRWQFEGSYFLANVREVFAEKGGPRRLQEQLLSEILMECASLKD 60

Query: 73  AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKF 132
           +   I    K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+RD  V   F
Sbjct: 61  SYRGI-EMIKRRLRLKKILLILDDVDDKKQLEFLAAEPGWFGPGSRIIITSRDTNV---F 116

Query: 133 RG-EEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGS 191
            G ++ KIY    L  ++A   F   AFK +   ED    S+ V             LGS
Sbjct: 117 TGNDDTKIYEAEKLNDDDALMLFNQKAFKNDQPTEDFVKLSKQVK---------YPCLGS 167

Query: 192 SLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKD 251
           ++               NR+ E    +I D+L+ISF+ L    K IFLDIACF +G +KD
Sbjct: 168 AI---------------NRLNEIPDREIIDVLRISFDGLHELEKKIFLDIACFLKGFEKD 212

Query: 252 FVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSR 308
            +  ILD           +LI++SL+S+  + + MHD+LQ MG++IVR ES +EPG+RSR
Sbjct: 213 RIIRILDSCGFHAHIGTQVLIERSLISVYRDQVWMHDLLQIMGKEIVRSESSEEPGRRSR 272

Query: 309 LWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIE 368
           LW  +++   L  N G + IE IFLD+ +IK    +  AF+ MS LRL K          
Sbjct: 273 LWTFEDVRLALMDNTGKEKIEAIFLDMPEIKEAQWNMEAFSKMSRLRLLKI--------- 323

Query: 369 KLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSK 428
                          VQL  G + L  KLR+L W +YP ++LP+  +   LVEL++  S 
Sbjct: 324 -------------DNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSS 370

Query: 429 VEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP 488
           +EQ W G K+ V     N K                           IN S  +NL + P
Sbjct: 371 IEQLWYGCKSAV-----NLK--------------------------IINLSNSLNLSKTP 399

Query: 489 QISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
            ++G   +  L L G +++ +V  S+     L+ ++L  CK + RI  +  ++ SL    
Sbjct: 400 DLTGIPNLESLILEGCTSLSKVHPSLAHHKKLQYMNLVNCKSI-RILPNNLEMESLKVFT 458

Query: 546 LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
           L GC  LE FP+I+  M  L  +  D T + EL SS  +L  LEVL + +C  L+++P +
Sbjct: 459 LDGCSKLEKFPDIVGNMNCLMELRLDGTGVEELSSSIHHLISLEVLSMNNCKNLESIPSS 518

Query: 606 IGSLEYLYYIL--------------------AAASAISQLPSSVALSNMLRSLDSSHCKG 645
           IG L+ L  +                     A+ ++I Q P+ + L   L+ L    CK 
Sbjct: 519 IGCLKSLKKLDLSGCSELKNLEKVESSEEFDASGTSIRQPPAPIFLLKNLKVLSFDGCKR 578

Query: 646 L------ESFPRTFLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLP 697
           +      +  P   L GL ++ +L +    +RE  +P++I  LSSL+ L LS NNF SLP
Sbjct: 579 IAVSLTDQRLPS--LSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNFVSLP 636

Query: 698 AIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
             + Q+S L  + LED  ML+SLPE+P  ++ ++L  C  L+ +P
Sbjct: 637 RSVNQLSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCTSLKEIP 681


>gi|224116230|ref|XP_002331993.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832117|gb|EEE70594.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1308

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 256/753 (33%), Positives = 366/753 (48%), Gaps = 124/753 (16%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGP-NIP 78
           KTT+A+ ++D+   +FEGSCF+ ++R +     G   LQ+Q+LS  L E+  V       
Sbjct: 231 KTTVARVLYDRIRWQFEGSCFLENIREDFAKKDGPRRLQEQLLSEILMERASVWDSYRGI 290

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K R+R  K+L++LDDV++  QLK L  E   FG GSRI++T+RDK+VL   R    +
Sbjct: 291 EMIKRRLRLKKILLLLDDVDDKEQLKFLAEEPGWFGPGSRIIITSRDKQVLT--RNGVDR 348

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV+GS +  +  
Sbjct: 349 IYEAEKLNDDDALTLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFMHGRSI 408

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             W   +   NRI +    +I D+L+ISF+ L    K IFLDIACF +G  KD +  ILD
Sbjct: 409 LEWRSAI---NRIYDILDREIIDVLRISFDGLHELEKKIFLDIACFLKGFKKDRIIRILD 465

Query: 259 DSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                      +LI+KSL+S+S + + MH++LQ MG++IVR E  KEPGKRSRLW  K++
Sbjct: 466 SCGFHAHIGTQVLIEKSLISVSRDRVWMHNLLQIMGKEIVRCEDPKEPGKRSRLWTYKDV 525

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
              L  N G + IE IFLD+  IK    + +AF+ MS LRL K                 
Sbjct: 526 FLALMDNTGKEKIEAIFLDMPGIKEAQWNMKAFSKMSRLRLLKI---------------- 569

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
                   VQL  G + L  +LR++ W +YP ++LPS  +   LVEL++  S +EQ W G
Sbjct: 570 ------DNVQLSEGPEDLSNELRFIEWHSYPSKSLPSGLQVDELVELHMANSSLEQLWCG 623

Query: 436 EKACVPSSIQNF---------------------------------------KYLSALSFK 456
            K+ V   I N                                        K L  ++  
Sbjct: 624 CKSAVNLKIINLSNSLYLTKTPDLTGIPNLESLILEGCTSLSEVHPSLAHHKKLQYVNLV 683

Query: 457 GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLY---LGQSAIEEVPSSIEC 513
            C+S+R  P+NL            C  L +FP I G +  L    L ++ I ++ SSI  
Sbjct: 684 NCKSIRILPNNLEMESLNVFTLDGCSKLEKFPDIVGNMNELMVLRLDETGITKLSSSIHH 743

Query: 514 LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT 573
           L  L +L +  CK L+ I +S   L+SL  L L GC  L++ PE L ++E L    +  T
Sbjct: 744 LIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGT 803

Query: 574 PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSN 633
            I +LP+S   L  L+VL ++ C ++  LP                              
Sbjct: 804 SIRQLPASIFILKNLKVLSLDGCKRIVVLPS----------------------------- 834

Query: 634 MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGN 691
                               L GL ++ +L +    +RE  +P++I  LSSL+ L LS N
Sbjct: 835 --------------------LSGLCSLEVLGLRACNLREGALPEDIGCLSSLKSLDLSQN 874

Query: 692 NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
           NF SLP  I Q+ +L  + LED  ML+SLPE+P
Sbjct: 875 NFVSLPKSINQLFELEMLVLEDCTMLESLPEVP 907



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 173/388 (44%), Gaps = 74/388 (19%)

Query: 568 IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLP 626
           +Y  +TP          +P LE L +E C+ L  +  ++   + L Y+ L    +I  LP
Sbjct: 639 LYLTKTP------DLTGIPNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVNCKSIRILP 692

Query: 627 SSVALSNM-LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEI 685
           +++ + ++ + +LD   C  LE FP   +  ++ + +L + +  + ++   I +L  L +
Sbjct: 693 NNLEMESLNVFTLDG--CSKLEKFP-DIVGNMNELMVLRLDETGITKLSSSIHHLIGLGL 749

Query: 686 LYL-SGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCK--MLQSLP 742
           L + S  N ES+P+ I  +  L+ + L   + L+ +PE    ++ L   D     ++ LP
Sbjct: 750 LSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGTSIRQLP 809

Query: 743 VLPFCLESL---DLTGCNMLRSLPELP-LC-LQYLNLEDCNMLR-SLPELPLCLQLLTVR 796
              F L++L    L GC  +  LP L  LC L+ L L  CN+   +LPE   CL  L   
Sbjct: 810 ASIFILKNLKVLSLDGCKRIVVLPSLSGLCSLEVLGLRACNLREGALPEDIGCLSSLKSL 869

Query: 797 NC--NRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGK 854
           +   N   SLP+ +  L EL+  VLE  +     L+  PE                    
Sbjct: 870 DLSQNNFVSLPKSINQLFELEMLVLEDCTM----LESLPE-------------------- 905

Query: 855 ANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSS 914
             +K+            +++ R G+ +A+              PG+EI  WF++QS GSS
Sbjct: 906 VPSKV---------QTGLSNPRPGFSIAV--------------PGNEILGWFNHQSEGSS 942

Query: 915 ICIQLPPHSSCRNLIGFAFCAVLDSKKV 942
           I +Q+P  S     +GF  C    + ++
Sbjct: 943 ISVQVPSWS-----MGFVACVAFSANEL 965



 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 114/282 (40%), Gaps = 72/282 (25%)

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHW-DTYPLR 408
           N+SN  L+    P    I  L S+  E   S S+V  P+   +  KKL+Y++  +   +R
Sbjct: 634 NLSN-SLYLTKTPDLTGIPNLESLILEGCTSLSEVH-PSLAHH--KKLQYVNLVNCKSIR 689

Query: 409 TLPSNFKPKNLVELNLR-CSKVEQ---------------PWEGEKACVPSSIQNFKYLSA 452
            LP+N + ++L    L  CSK+E+                 E     + SSI +   L  
Sbjct: 690 ILPNNLEMESLNVFTLDGCSKLEKFPDIVGNMNELMVLRLDETGITKLSSSIHHLIGLGL 749

Query: 453 LSFKGCQSLRSFPSNLHFVCPVT-INFSYCVNLIEFPQISGKVTRLY---LGQSAIEEVP 508
           LS   C++L S PS++  +  +  ++ S C  L   P+  G+V  L       ++I ++P
Sbjct: 750 LSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGTSIRQLP 809

Query: 509 SSIECLTDLEVLDLRGCKR------------LKRISTSFCKLRS---------------- 540
           +SI  L +L+VL L GCKR            L+ +    C LR                 
Sbjct: 810 ASIFILKNLKVLSLDGCKRIVVLPSLSGLCSLEVLGLRACNLREGALPEDIGCLSSLKSL 869

Query: 541 -------------------LVTLILLGCLNLEHFPEILEKME 563
                              L  L+L  C  LE  PE+  K++
Sbjct: 870 DLSQNNFVSLPKSINQLFELEMLVLEDCTMLESLPEVPSKVQ 911


>gi|356570335|ref|XP_003553345.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1082

 Score =  314 bits (805), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 245/753 (32%), Positives = 366/753 (48%), Gaps = 87/753 (11%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V ++GI G+GG+GKTTLA A+++  +  FE  CF+ +VR  S+  G ++HLQ  
Sbjct: 216 VGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFLENVRETSKKHG-IQHLQSN 274

Query: 61  MLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           +LS T+ E   +         + R+++ K+L++LDDV++  QL+ L G  D FG GSR++
Sbjct: 275 LLSETVGEHKLIGVKQGISIIQHRLQQQKILLILDDVDKREQLQALAGRPDLFGLGSRVI 334

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK++L     E  + Y VN L  E A E     AFK                +Y  
Sbjct: 335 ITTRDKQLLACHGVE--RTYEVNELNEEHALELLSWKAFKLEKVDPFYKDVLNRAATYAS 392

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL LEV+GS+L  +    W   L    RI   EI +I   LK+S++ L    +S+FLD
Sbjct: 393 GLPLALEVIGSNLYGRNIEQWISALDRYKRIPNKEIQEI---LKVSYDALEEDEQSVFLD 449

Query: 241 IACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSIS--GNFLNMHDILQEMGRQI 294
           IAC F+      V  IL       +     +L++KSL+ IS  GN + +HD++++MG++I
Sbjct: 450 IACCFKKYGLVEVEDILHAHHGHCMKHHIGVLVEKSLIKISCDGN-VTLHDLIEDMGKEI 508

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINL--DPRAFTNMS 352
           VRQES KEPGKRSRLW PK+I +VL+ NKGT  IE I +D    + I +  D  AF  M 
Sbjct: 509 VRQESVKEPGKRSRLWFPKDIVQVLEENKGTSQIEIICMDFPIFQEIQIEWDGYAFKKMK 568

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            L+                       L+        G  +LP  LR L W  YP +  P 
Sbjct: 569 KLK----------------------TLNIRNGHFSKGPKHLPNTLRVLEWKRYPTQNFPY 606

Query: 413 NFKPKNLVELNLRCSKVEQPWEG----EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
           +F PK L    L       P+ G    E A +      F  L++L+F  CQ L   P   
Sbjct: 607 DFYPKKLAICKL-------PYSGFTSHELAVLLKKASKFVNLTSLNFDYCQYLTHIPDVF 659

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
                  ++F +C NL                 SAI     S+  L  L++LD  GC RL
Sbjct: 660 CLPHLENLSFQWCQNL-----------------SAIH---YSVGFLEKLKILDGEGCSRL 699

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
           K  S    KL SL    L  C +LE FPEIL +ME +K +    TP+ + P SF NL  L
Sbjct: 700 K--SFPAMKLTSLEQFKLRYCHSLESFPEILGRMESIKELDLKETPVKKFPLSFGNLTRL 757

Query: 589 EVLFVEDCSKLDNLP-DNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
           + L +   + ++ +P  ++G +  L  I+     +S  P     +  + S  SS+ + L+
Sbjct: 758 QKLQL-SLTGVNGIPLSSLGMMPDLVSIIGWRWELSPFPEDDDGAEKVSSTLSSNIQYLQ 816

Query: 648 SFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
                           +++D   R +   + + ++++ L L GN+F  +P  IK+   L 
Sbjct: 817 ------------FRCCNLTDDFFRIV---LPWFANVKNLDLPGNSFTVIPECIKECHFLT 861

Query: 708 FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
            ++L     L+ +  +P  LKY   I+C+ L S
Sbjct: 862 RLNLNYCEFLREIRGIPPNLKYFSAIECRSLTS 894



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 145/405 (35%), Gaps = 99/405 (24%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALS-N 633
           +T +P  F  LP LE L  + C  L  +  ++G LE L   +      S+L S  A+   
Sbjct: 652 LTHIPDVF-CLPHLENLSFQWCQNLSAIHYSVGFLEKLK--ILDGEGCSRLKSFPAMKLT 708

Query: 634 MLRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNN 692
            L      +C  LESFP   +LG + ++  L + +  V++ P     L+ L+ L LS   
Sbjct: 709 SLEQFKLRYCHSLESFPE--ILGRMESIKELDLKETPVKKFPLSFGNLTRLQKLQLSLTG 766

Query: 693 FESLP-----------AIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
              +P           +II    +L     +D    +    L   ++YL    C +    
Sbjct: 767 VNGIPLSSLGMMPDLVSIIGWRWELSPFPEDDDGAEKVSSTLSSNIQYLQFRCCNLTDDF 826

Query: 742 --PVLPFC--LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRN 797
              VLP+   +++LDL G     S   +P C++     +C+ L  L             N
Sbjct: 827 FRIVLPWFANVKNLDLPG----NSFTVIPECIK-----ECHFLTRL-------------N 864

Query: 798 CNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANN 857
            N  + L EI                      +  P +LK     F    C  L     +
Sbjct: 865 LNYCEFLREI----------------------RGIPPNLKY----FSAIECRSLTSSCRS 898

Query: 858 KILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICI 917
           K+L                       N+ L E   +   LPG+ IP+WF  Q+S   I  
Sbjct: 899 KLL-----------------------NQDLHEGGSTFFYLPGANIPEWFEFQTSELPISF 935

Query: 918 ----QLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDL 958
               +LP  + C  L+    CA   S     D  R   +   F L
Sbjct: 936 WFRNKLPAIAIC--LVMEQVCACEYSSSSKGDTLRPLMIPTTFRL 978


>gi|255547496|ref|XP_002514805.1| ATP binding protein, putative [Ricinus communis]
 gi|223545856|gb|EEF47359.1| ATP binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  314 bits (805), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 252/679 (37%), Positives = 340/679 (50%), Gaps = 59/679 (8%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           M   D VQ +GI GMGGIGKTT+A+ + ++ S +FEGS F+++VR   E   GL HLQKQ
Sbjct: 205 MGQLDDVQFIGICGMGGIGKTTIARFVHEELSSQFEGSSFLANVR-EVEEKRGLVHLQKQ 263

Query: 61  MLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS  L ++           T+   R+   ++LI+LDDVN++ QLK L G  D FG+GSR
Sbjct: 264 LLSEILLDRNITICNAFGGMTEISNRLAHKRVLIILDDVNQLDQLKMLAGMHDWFGKGSR 323

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I+VT+RD+ +L K  G +K IYRV GL  +EA   FC  AF+ +H  ED    S   V+Y
Sbjct: 324 IIVTSRDEHLL-KCHGVDK-IYRVEGLGRDEALHLFCLKAFRNDHPIEDFLELSNQFVNY 381

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL L+V GS L  K  S W   L  L  I   EI    D L ISF+ L    K +F
Sbjct: 382 CNGLPLALDVFGSFLFGKSLSEWRSALDRLKEIPNQEI---LDKLNISFDGLEEMEKKLF 438

Query: 239 LDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
           LDIACFF GED+D+V  +LD         + +L+ KSL++IS   + MHD+LQE+GR IV
Sbjct: 439 LDIACFFNGEDRDYVYEVLDSCGLYPDFGISVLVSKSLITISKERIWMHDLLQELGRDIV 498

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           R+ES++EPGKRSRLW  K+I  VL ++ GT+ IE I LD  + +   L  + F       
Sbjct: 499 RRESQEEPGKRSRLWLYKDIRHVLSNDTGTEQIEAIVLDSCEQEDEQLSAKGFM------ 552

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
                            M     L    + L  GL+YL  KLRYL WD YP + LPS+F+
Sbjct: 553 ----------------GMKRLRLLKLRNLHLSQGLEYLSNKLRYLEWDRYPFKFLPSSFQ 596

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY----LSALSFKGCQSLRSFPSNLHFV 471
           P  L EL++RCS +E+ W+G K      + +  Y    L  + FK   +L S        
Sbjct: 597 PDELTELHMRCSIMERLWKGIKPLKMLKVIDLSYSVNLLKTMDFKDVPNLES-------- 648

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDL----EVLDLRGCKR 527
               +N   C  L E  Q  G + RL L    I      +  L D       L  +    
Sbjct: 649 ----LNLEGCTRLFEVHQSLGILNRLKLNVGGIATSQLPLAKLWDFLLPSRFLPWKNQNP 704

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLE-HFPEILEKMEHLKRIYSDRTPITELPSSFENLP 586
           L     S   LRSL +L L  C  +E   P  L     LK           +PSS   L 
Sbjct: 705 LAVTLPSLSVLRSLKSLDLSYCNLMEGALPNDLSCFPMLKTFNLSGNDFFSIPSSISRLT 764

Query: 587 GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAI-SQLPSSVALSNMLRSLDSSHCKG 645
            LE     DC +L   P+   S+  LY  +   + + S LP +++    L +L    CK 
Sbjct: 765 KLEDFRFADCKRLQAFPNLPSSI--LYLSMDGCTVLQSLLPRNISRQFKLENLHVEDCKR 822

Query: 646 LESFPR--TFLLGLSAMGL 662
           L+  P   + +L LS  GL
Sbjct: 823 LQLSPNLSSSILHLSVDGL 841



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 202/490 (41%), Gaps = 137/490 (27%)

Query: 582  FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLP--------------- 626
            F+++P LE L +E C++L  +  ++G L  L   +    A SQLP               
Sbjct: 640  FKDVPNLESLNLEGCTRLFEVHQSLGILNRLKLNVGGI-ATSQLPLAKLWDFLLPSRFLP 698

Query: 627  -----------SSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
                        S+++   L+SLD S+C  +E                         +P 
Sbjct: 699  WKNQNPLAVTLPSLSVLRSLKSLDLSYCNLMEG-----------------------ALPN 735

Query: 676  EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
            +++    L+   LSGN+F S+P+ I ++++L     EDF                   DC
Sbjct: 736  DLSCFPMLKTFNLSGNDFFSIPSSISRLTKL-----EDF----------------RFADC 774

Query: 736  KMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTV 795
            K LQ+ P LP  +  L + GC +L+SL  LP           N+ R        L+ L V
Sbjct: 775  KRLQAFPNLPSSILYLSMDGCTVLQSL--LPR----------NISRQFK-----LENLHV 817

Query: 796  RNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKL---- 851
             +C RLQ  P        L +S+L      S D   + E+  S +    F NCLKL    
Sbjct: 818  EDCKRLQLSPN-------LSSSILHL----SVDGLTSQETQTSNSSSLTFVNCLKLIEVQ 866

Query: 852  --NGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQ 909
              +  A  ++ +     +RH +        +++I             L G+EIP WF+ Q
Sbjct: 867  SEDTSAFRRLTSYLHYLLRHSSQGLFNPSSQISI------------CLAGNEIPGWFNYQ 914

Query: 910  SSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHV 969
            S GSS+ +QLPP       +GFA   V +S++  +D       +   DL    ++E + +
Sbjct: 915  SVGSSLKLQLPPFWWTNKWMGFAISIVFESQESQTDT-----SAILCDLH-ACIAEDQDL 968

Query: 970  DLGYNSRYI---EDLIDSDRVILGFKP-----CLNVGFPDGYHHTIATFKFFAERKFYKI 1021
             LG +  +I      I SD++   + P     CL++   +  +H   TF   ++R   ++
Sbjct: 969  FLGSSIVHISKDSSNITSDQLWFNYMPRSSLTCLDMW--EACNHLKVTFS--SDR--LRV 1022

Query: 1022 KRCGLCPVYA 1031
            K CG   +++
Sbjct: 1023 KHCGFRAIFS 1032


>gi|224145367|ref|XP_002325616.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862491|gb|EEE99997.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 889

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 313/1040 (30%), Positives = 466/1040 (44%), Gaps = 234/1040 (22%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQ-- 58
            M+S D V IVGIWGMGGIGKTT+A+ +  +    FEG  F ++ R  S+           
Sbjct: 26   MESPD-VLIVGIWGMGGIGKTTIAQVVCSKVRSRFEG-IFFANFRQQSDLLRRFLKRLLG 83

Query: 59   KQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKR----LIGELDQFG 114
            ++ L+T  S            F + R+RR+K+ IVLDDV+++ +L+     L G    FG
Sbjct: 84   QETLNTIGSLSFRDT------FVRNRLRRIKVFIVLDDVDDLMRLEEWRDLLDGRNSSFG 137

Query: 115  QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
             GS++++T+RDK+VL+    E    Y V GL  E+A + F + A K N+ P   + H  S
Sbjct: 138  PGSKVLITSRDKQVLKNVVDE---TYEVEGLNDEDAIQLFSSKALK-NYIPTIDHRHLIS 193

Query: 175  -VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
             +  + +GNPL L+VLGSSL  K    W   L+ L +  +     I   L+IS++ L   
Sbjct: 194  QIARHVQGNPLALKVLGSSLYGKSIEEWRSALYKLTQDPQ-----IERALRISYDGLDSE 248

Query: 234  VKSIFLDIACFFEGEDKDFVASILDD--SESDVLDI--LIDKSLVSISGNFLNMHDILQE 289
             KSIFLDIA FF G + D    ILD     S ++DI  LIDK L++ S N L  HD+L++
Sbjct: 249  QKSIFLDIAHFFIGWEPDEATRILDGLYGRSVIIDISTLIDKCLITTSHNSLETHDLLRQ 308

Query: 290  MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAF 348
            M   IVR ES+  PG+RSRL    ++ +VL+ NKGT  I+GI L++S   + I L   AF
Sbjct: 309  MAINIVRAESDF-PGERSRLCHRPDVVQVLEENKGTQKIKGISLEMSVFPRHILLKSDAF 367

Query: 349  TNMSNLRLFKFYVPKFYEIEK--LPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
              M  LR    Y+ +  + +K  LP               P GL+Y+P +LRYL W  +P
Sbjct: 368  AMMDGLRFLNIYISRHSQEDKMHLP---------------PTGLEYIPNELRYLRWYGFP 412

Query: 407  LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS 466
             ++LP +F+  +LVEL+LR SK+ + W G K      + N +                  
Sbjct: 413  SKSLPPSFRAVHLVELHLRKSKLVKLWTGVK-----DVGNLR------------------ 449

Query: 467  NLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCK 526
                     I+ SY   L E P +S               +  ++ECL       L+ C 
Sbjct: 450  --------KIDLSYSPYLTELPDLS---------------MAKNLECLR------LKDCP 480

Query: 527  RLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLP 586
             L  + +S   L  L  + L  C NL  FP +  K+     I                  
Sbjct: 481  SLTEVPSSLQYLDKLEEIDLSDCNNLRSFPMLDSKVLSFLSIS----------------- 523

Query: 587  GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
                L+V  C  +          + L ++    ++I ++P SV  +  L +LD   C  +
Sbjct: 524  --RCLYVTTCPMIS---------QNLVWLRLEQTSIKEVPQSVTGNLQLLNLDG--CSKM 570

Query: 647  ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQ 705
              FP      L  +  L++   A++E+P  I +L+ L  L +SG +  ES P I   M  
Sbjct: 571  TKFPEN----LEDIEELNLRGTAIKEVPSSIQFLTRLRHLNMSGCSKLESFPEITVHMKS 626

Query: 706  LRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPEL 765
            L  + L        + E+PL + + H+I              L SLDL G          
Sbjct: 627  LEHLILSK----TGIKEIPL-ISFKHMI-------------SLISLDLDGTP-------- 660

Query: 766  PLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKH 825
                          +++LPELP  L+ L   +C  L+++   +                 
Sbjct: 661  --------------IKALPELPPSLRYLNTHDCASLETVTSTI----------------- 689

Query: 826  SPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINE 885
                     ++    +  +FTNC KL+ K         L+   H+ I S   G E+    
Sbjct: 690  ---------NIGRLRLGLDFTNCFKLDQKP--------LVAAMHLKIQS---GEEIP--- 726

Query: 886  KLSELRGSL-IVLPGSEIPDWFSNQSSGSSICIQLPPHSSC-RNLIGFAFCAVLDSKKVD 943
                  GS+ +VLPGSEIP+WF ++  GSS+ IQLP  S+C + L G AFC V  +  + 
Sbjct: 727  -----DGSIQMVLPGSEIPEWFGDKGIGSSLTIQLP--SNCHQQLKGIAFCLVFLA-PLP 778

Query: 944  SDCFRYFYVSFQFDLEIKTLSETKHVD----LGYNSRYIEDLI---DSDRVILGFKPCLN 996
            S  F +  V   FD  +K+ +     D    L      +   +   DSD +IL +K  L 
Sbjct: 779  SHGFSFSDV--YFDCHVKSENGENDGDDEVVLASQKSLLSHYLRTCDSDHMILLYKLEL- 835

Query: 997  VGFPDGYHHTIATFKFFAER 1016
            V     Y     TFKF+  R
Sbjct: 836  VDHLRKYSGNEVTFKFYRGR 855


>gi|105922738|gb|ABF81434.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1307

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 256/753 (33%), Positives = 366/753 (48%), Gaps = 124/753 (16%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGP-NIP 78
           KTT+A+ ++D+   +FEGSCF+ ++R +     G   LQ+Q+LS  L E+  V       
Sbjct: 256 KTTVARVLYDRIRWQFEGSCFLENIREDFAKKDGPRRLQEQLLSEILMERASVWDSYRGI 315

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K R+R  K+L++LDDV++  QLK L  E   FG GSRI++T+RDK+VL   R    +
Sbjct: 316 EMIKRRLRLKKILLLLDDVDDKEQLKFLAEEPGWFGPGSRIIITSRDKQVLT--RNGVDR 373

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV+GS +  +  
Sbjct: 374 IYEAEKLNDDDALTLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFMHGRSI 433

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             W   +   NRI +    +I D+L+ISF+ L    K IFLDIACF +G  KD +  ILD
Sbjct: 434 LEWRSAI---NRIYDILDREIIDVLRISFDGLHELEKKIFLDIACFLKGFKKDRIIRILD 490

Query: 259 DSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                      +LI+KSL+S+S + + MH++LQ MG++IVR E  KEPGKRSRLW  K++
Sbjct: 491 SCGFHAHIGTQVLIEKSLISVSRDRVWMHNLLQIMGKEIVRCEDPKEPGKRSRLWTYKDV 550

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
              L  N G + IE IFLD+  IK    + +AF+ MS LRL K                 
Sbjct: 551 FLALMDNTGKEKIEAIFLDMPGIKEAQWNMKAFSKMSRLRLLKI---------------- 594

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
                   VQL  G + L  +LR++ W +YP ++LPS  +   LVEL++  S +EQ W G
Sbjct: 595 ------DNVQLSEGPEDLSNELRFIEWHSYPSKSLPSGLQVDELVELHMANSSLEQLWCG 648

Query: 436 EKACVPSSIQNF---------------------------------------KYLSALSFK 456
            K+ V   I N                                        K L  ++  
Sbjct: 649 CKSAVNLKIINLSNSLYLTKTPDLTGIPNLESLILEGCTSLSEVHPSLAHHKKLQYVNLV 708

Query: 457 GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLY---LGQSAIEEVPSSIEC 513
            C+S+R  P+NL            C  L +FP I G +  L    L ++ I ++ SSI  
Sbjct: 709 NCKSIRILPNNLEMESLNVFTLDGCSKLEKFPDIVGNMNELMVLRLDETGITKLSSSIHH 768

Query: 514 LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT 573
           L  L +L +  CK L+ I +S   L+SL  L L GC  L++ PE L ++E L    +  T
Sbjct: 769 LIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGT 828

Query: 574 PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSN 633
            I +LP+S   L  L+VL ++ C ++  LP                              
Sbjct: 829 SIRQLPASIFILKNLKVLSLDGCKRIVVLPS----------------------------- 859

Query: 634 MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGN 691
                               L GL ++ +L +    +RE  +P++I  LSSL+ L LS N
Sbjct: 860 --------------------LSGLCSLEVLGLRACNLREGALPEDIGCLSSLKSLDLSQN 899

Query: 692 NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
           NF SLP  I Q+ +L  + LED  ML+SLPE+P
Sbjct: 900 NFVSLPKSINQLFELEMLVLEDCTMLESLPEVP 932



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 156/355 (43%), Gaps = 69/355 (19%)

Query: 568 IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLP 626
           +Y  +TP          +P LE L +E C+ L  +  ++   + L Y+ L    +I  LP
Sbjct: 664 LYLTKTP------DLTGIPNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVNCKSIRILP 717

Query: 627 SSVALSNM-LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEI 685
           +++ + ++ + +LD   C  LE FP   +  ++ + +L + +  + ++   I +L  L +
Sbjct: 718 NNLEMESLNVFTLDG--CSKLEKFP-DIVGNMNELMVLRLDETGITKLSSSIHHLIGLGL 774

Query: 686 LYL-SGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCK--MLQSLP 742
           L + S  N ES+P+ I  +  L+ + L   + L+ +PE    ++ L   D     ++ LP
Sbjct: 775 LSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGTSIRQLP 834

Query: 743 VLPFCLESL---DLTGCNMLRSLPELP-LC-LQYLNLEDCNMLR-SLPELPLCLQLLTVR 796
              F L++L    L GC  +  LP L  LC L+ L L  CN+   +LPE   CL  L   
Sbjct: 835 ASIFILKNLKVLSLDGCKRIVVLPSLSGLCSLEVLGLRACNLREGALPEDIGCLSSLKSL 894

Query: 797 NC--NRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGK 854
           +   N   SLP+ +  L EL+  VLE  +     L+  PE                    
Sbjct: 895 DLSQNNFVSLPKSINQLFELEMLVLEDCTM----LESLPE-------------------- 930

Query: 855 ANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQ 909
             +K+            +++ R G+ +A+              PG+EI  WF++Q
Sbjct: 931 VPSKV---------QTGLSNPRPGFSIAV--------------PGNEILGWFNHQ 962


>gi|357456965|ref|XP_003598763.1| Resistance protein [Medicago truncatula]
 gi|355487811|gb|AES69014.1| Resistance protein [Medicago truncatula]
          Length = 1184

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 232/622 (37%), Positives = 325/622 (52%), Gaps = 84/622 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            DS++ V +VGI+G+GGIGK+T A+A+ +  + +FEG CF+ D+R   E    L  LQ+ 
Sbjct: 213 FDSNERVNMVGIYGIGGIGKSTTARAVHNLIADQFEGVCFLDDIR-KREINHDLAQLQET 271

Query: 61  MLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +L+  L EK    G      +  K R++R K+L++LD+V++V QL+  +G  D FG GS+
Sbjct: 272 LLADILGEKDIKVGDVYRGMSIVKRRLQRKKVLLILDNVDKVQQLQAFVGGHDWFGFGSK 331

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENH---CPEDLNWHSRSV 175
           ++VTTRDK +L        K+Y V  L+ E+A E F   AFK      C  D+   ++ +
Sbjct: 332 VIVTTRDKHLLATH--GIVKVYEVKQLKSEKALELFSWHAFKNKKIDPCYVDI---AKRL 386

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           VSY  G PL LEV+GS L  K    W   L    R+   +IH+I   LK+S++ L    K
Sbjct: 387 VSYCHGLPLALEVIGSHLFGKSLGVWKSSLVKYKRVLRKDIHEI---LKVSYDDLEEDEK 443

Query: 236 SIFLDIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNF-LNMHDILQEMG 291
            IFLDIACFF   +  +V  +L        D + +LIDKSL+ I  N  + MHD++Q MG
Sbjct: 444 GIFLDIACFFNSYEISYVKELLYLHGFQAEDGIQVLIDKSLMKIDINGCVRMHDLIQGMG 503

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IVR+ES  EPG+RSRLW   +I RVL+ NKGTD IE I  DL K + +    +AF  M
Sbjct: 504 REIVRRESTSEPGRRSRLWFSDDIVRVLEENKGTDTIEVIIADLRKGRKVKWCGKAFGQM 563

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NLR+                      L         G   LP  L  L W  Y L +LP
Sbjct: 564 KNLRI----------------------LIIRNAGFSRGPQILPNSLSVLDWSGYQLSSLP 601

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVP--SSIQNFKYLSALSFKGCQSLRSFPS--- 466
           S+F PKNLV LNL            ++C+    S++ F+ LS L F+GC+ L   PS   
Sbjct: 602 SDFYPKNLVILNL-----------PESCLKWFESLKVFETLSFLDFEGCKLLTEMPSLSR 650

Query: 467 --NLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRG 524
             NL  +C       YC NL                     ++  S+  L  L +L  +G
Sbjct: 651 VPNLGALC-----LDYCTNL--------------------NKIHDSVGFLERLVLLSAQG 685

Query: 525 CKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
           C +L+ I   +  L SL TL L GC  LE FPE++  ME++K +Y D+T + +LP +  N
Sbjct: 686 CTQLE-ILVPYINLPSLETLDLRGCSRLESFPEVVGVMENIKDVYLDQTALKQLPFTIGN 744

Query: 585 LPGLEVLFVEDCSKLDNLPDNI 606
           L GL  LF+  C  +  LP  I
Sbjct: 745 LIGLRRLFLRGCQGMIMLPSYI 766



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 1/145 (0%)

Query: 510 SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY 569
           S++    L  LD  GCK L  +  S  ++ +L  L L  C NL    + +  +E L  + 
Sbjct: 624 SLKVFETLSFLDFEGCKLLTEMP-SLSRVPNLGALCLDYCTNLNKIHDSVGFLERLVLLS 682

Query: 570 SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSV 629
           +      E+   + NLP LE L +  CS+L++ P+ +G +E +  +    +A+ QLP ++
Sbjct: 683 AQGCTQLEILVPYINLPSLETLDLRGCSRLESFPEVVGVMENIKDVYLDQTALKQLPFTI 742

Query: 630 ALSNMLRSLDSSHCKGLESFPRTFL 654
                LR L    C+G+   P   L
Sbjct: 743 GNLIGLRRLFLRGCQGMIMLPSYIL 767


>gi|40644189|emb|CAC95124.1| TIR/NBS/LRR protein [Populus deltoides]
          Length = 1147

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 239/759 (31%), Positives = 385/759 (50%), Gaps = 117/759 (15%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           ++D V+IVGI GM GIGKTT+A+A+F+Q  + FEGSCF+S +   S+   GL  LQKQ+ 
Sbjct: 233 ATDDVRIVGIHGMPGIGKTTIAQAVFNQLCYGFEGSCFLSSINERSKQVNGLVPLQKQLH 292

Query: 63  STTLSEKLEVAGPNIPH----FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
              L  K +VA  +         KER+RR ++L+V DDV  + QL  L+G+   FG GSR
Sbjct: 293 HDIL--KQDVANFDCADRGKVLIKERLRRKRVLVVADDVAHLEQLNALMGDRSWFGPGSR 350

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRD  +L     E  +IY++  L+ +E+ + F   AFK++   +D    S+  V Y
Sbjct: 351 VIITTRDSNLLR----EADQIYQIEELKPDESLQLFSRHAFKDSKPAQDYIELSKKAVGY 406

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+G+ L  K +   G+ + +++ +      DI   L IS++ L   ++  F
Sbjct: 407 CGGLPLALEVIGALLYRKNR---GRCVSEIDNLSRIPNQDIQGKLLISYHALDGELQRAF 463

Query: 239 LDIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           LDIACFF G ++++V  +L      +   VL+ L ++SL+ + G  ++MHD+L++MGR++
Sbjct: 464 LDIACFFIGIEREYVTKVLGARCRPNPEVVLETLSERSLIQVFGETVSMHDLLRDMGREV 523

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNK--GTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           V + S K+PGKR+R+W+ ++   VL+  K  GTD ++G+ LD+   +  +L   +F  M 
Sbjct: 524 VCKASPKQPGKRTRIWNQEDAWNVLEQQKVRGTDVVKGLALDVRASEAKSLSAGSFAEMK 583

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            L L                      L  + V L   L    K+L ++ W   PL+ LP 
Sbjct: 584 CLNL----------------------LQINGVHLTGSLKLFSKELMWICWHECPLKYLPF 621

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           +F   NL  L+++ S +++ W+G+K  V + +Q+ K+L  +              ++   
Sbjct: 622 DFTLDNLAVLDMQYSNLKELWKGKK--VRNMLQSPKFLQYV--------------IYIYI 665

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
              +N   C +L+E  Q                    SI  LT L+ L+L GC RLK + 
Sbjct: 666 LEKLNLKGCSSLVEVHQ--------------------SIGNLTSLDFLNLEGCWRLKNLP 705

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
            S   ++SL TL + GC  LE  PE +  ME L  + +D     +  SS           
Sbjct: 706 ESIGNVKSLETLNISGCSQLEKLPESMGDMESLIELLADGIENEQFLSS----------- 754

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
                        IG L+++   L+     S  PSS  +S  + +L           P +
Sbjct: 755 -------------IGQLKHVRR-LSLRGYSSTPPSSSLISAGVLNLK-------RWLPTS 793

Query: 653 FLLGLSA--MGLLH--ISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
           F+  +S   + L H  +SD A + +  + + LS+LE+L L GN F SLP+ I  +S+L+F
Sbjct: 794 FIQWISVKRLELPHGGLSDRAAKCV--DFSGLSALEVLDLIGNKFSSLPSGIGFLSKLKF 851

Query: 709 IHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ--SLPVLP 745
           + ++    L S+P+LP  L  L    CK L+   +P+ P
Sbjct: 852 LSVKACKYLVSIPDLPSSLDCLDASYCKSLERVRIPIEP 890



 Score = 40.0 bits (92), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 24/107 (22%)

Query: 715 NMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNML----RSLPELPLCLQ 770
           NMLQS    P  L+Y+  I            + LE L+L GC+ L    +S+  L   L 
Sbjct: 649 NMLQS----PKFLQYVIYI------------YILEKLNLKGCSSLVEVHQSIGNLT-SLD 691

Query: 771 YLNLEDCNMLRSLPEL---PLCLQLLTVRNCNRLQSLPEILLCLQEL 814
           +LNLE C  L++LPE       L+ L +  C++L+ LPE +  ++ L
Sbjct: 692 FLNLEGCWRLKNLPESIGNVKSLETLNISGCSQLEKLPESMGDMESL 738


>gi|356524185|ref|XP_003530712.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 882

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 224/630 (35%), Positives = 328/630 (52%), Gaps = 96/630 (15%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S  V+ +GIWGMGGIGKTTLA  ++D+ SH+FE +CF++++   S+           M 
Sbjct: 212 GSSEVKTLGIWGMGGIGKTTLATTLYDKLSHKFEDACFLANLSEQSDKPKNRSFGNFDMA 271

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELD--QFGQGSRIV 120
           +    +K              R++  K+LI+LDDV    QL ++I + D    G GSR++
Sbjct: 272 NLEQLDK-----------NHSRLQDKKVLIILDDVTTSEQLDKIIPDFDCDFLGPGSRVI 320

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           VTTRDK++L +      +IY V    F+++ + FC  AF E    +     SR VVSY K
Sbjct: 321 VTTRDKQILSRV----DEIYPVGEWSFDKSLQLFCLTAFGEKQPNDGYADLSRMVVSYCK 376

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL L+VLG+SL  + K  W   L  L +I   EIH +   LK+S++ L    + IFLD
Sbjct: 377 GIPLALKVLGASLRSRSKEIWECELRKLQKIPNKEIHKV---LKLSYDGLDRSEQDIFLD 433

Query: 241 IACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVR 296
           IACFF+G D+ +V  +L+  E   +  ++IL+DK+L++IS  N + MHD++QEMGR+IV 
Sbjct: 434 IACFFKGRDRCWVTRVLEAFEFFPAPGINILLDKALITISDSNLILMHDLIQEMGREIVH 493

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSNL- 354
           QES K+PG+R+RLW  +E+  VLK+NKGTD +EGI LDLS++ + +NL   +   M+NL 
Sbjct: 494 QES-KDPGRRTRLWRHEEVHDVLKYNKGTDVVEGISLDLSRLNEDLNLSSNSLAKMTNLR 552

Query: 355 ------------RLFKFYVPKFYE-------IEKLPSMSTEEQLSY-----SKVQLPNGL 390
                       R+F  Y+P   E       +E L     E  + Y         LPNGL
Sbjct: 553 FLRIDGESWLSDRIFNGYLPNGLESLYLSNDVEPLYFPGLESLVLYFPNGHVSSYLPNGL 612

Query: 391 D-----------YLP----------------KKLRYLHWDTYPLRTLPSNFKPKNLVELN 423
           +           YLP                 +LRYLHWD   L +LP NF  + LV L+
Sbjct: 613 ESFYFLDGPVSLYLPNGLESLYFPSGLESLSNQLRYLHWDLCYLESLPPNFCAEQLVVLH 672

Query: 424 LRCSKVEQPWEGEKACVPSSIQNFKY---------------LSALSFKGCQSLRSFPSNL 468
           ++ SK+++ W+G +  V     +  Y               L ++S  GC+SL     ++
Sbjct: 673 MKFSKLKKLWDGVQNLVNLKEIDLSYSEDLIEIPNLSEAENLESISLSGCKSLHKL--HV 730

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
           H      +    C +L EF   S K+T+L L  + I E+ SSI  L  LE L LRG   +
Sbjct: 731 HSKSLRAMELDGCSSLKEFSVTSEKMTKLNLSYTNISELSSSIGHLVSLEKLYLRGTN-V 789

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
           + +  +   L  L +L L GC  L   PE+
Sbjct: 790 ESLPANIKNLSMLTSLRLDGCRKLMSLPEL 819



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 110/231 (47%), Gaps = 32/231 (13%)

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEH-LKRIYSDRTPITELPSSF--ENLPGLEV 590
           SF  L   V+L L   L   +FP  LE + + L+ ++ D   +  LP +F  E L  L +
Sbjct: 614 SFYFLDGPVSLYLPNGLESLYFPSGLESLSNQLRYLHWDLCYLESLPPNFCAEQLVVLHM 673

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPS--------SVALSN-------- 633
            F    SKL  L D + +L  L  I L+ +  + ++P+        S++LS         
Sbjct: 674 KF----SKLKKLWDGVQNLVNLKEIDLSYSEDLIEIPNLSEAENLESISLSGCKSLHKLH 729

Query: 634 ----MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS 689
                LR+++   C  L+ F  T       M  L++S   + E+   I +L SLE LYL 
Sbjct: 730 VHSKSLRAMELDGCSSLKEFSVTS----EKMTKLNLSYTNISELSSSIGHLVSLEKLYLR 785

Query: 690 GNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           G N ESLPA IK +S L  + L+    L SLPELP  L+ L +  CK L S
Sbjct: 786 GTNVESLPANIKNLSMLTSLRLDGCRKLMSLPELPPSLRLLDINGCKKLMS 836



 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 114/280 (40%), Gaps = 52/280 (18%)

Query: 570 SDRTPITELPSSFENL-----------PGLE--VLFVEDCSKLDNLPDNIGSLEYL---- 612
           SDR     LP+  E+L           PGLE  VL+  +      LP+ + S  +L    
Sbjct: 563 SDRIFNGYLPNGLESLYLSNDVEPLYFPGLESLVLYFPNGHVSSYLPNGLESFYFLDGPV 622

Query: 613 -YYILAAASAISQLPSSV-ALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV 670
             Y+     ++   PS + +LSN LR L    C  LES P  F      + +LH+    +
Sbjct: 623 SLYLPNGLESL-YFPSGLESLSNQLRYLHWDLCY-LESLPPNFCA--EQLVVLHMKFSKL 678

Query: 671 REIPQEIAYLSSLEILYLSGNNFESLPAI--IKQMSQLRFIHLEDFNMLQSLPELPLCLK 728
           +++   +  L +L+ + LS +  E L  I  + +   L  I L     L  L      L+
Sbjct: 679 KKLWDGVQNLVNLKEIDLSYS--EDLIEIPNLSEAENLESISLSGCKSLHKLHVHSKSLR 736

Query: 729 YLHLIDCKMLQSLPVLPFCLESLDLTGCNM---------LRSLPELPL------------ 767
            + L  C  L+   V    +  L+L+  N+         L SL +L L            
Sbjct: 737 AMELDGCSSLKEFSVTSEKMTKLNLSYTNISELSSSIGHLVSLEKLYLRGTNVESLPANI 796

Query: 768 ----CLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQS 803
                L  L L+ C  L SLPELP  L+LL +  C +L S
Sbjct: 797 KNLSMLTSLRLDGCRKLMSLPELPPSLRLLDINGCKKLMS 836


>gi|255579570|ref|XP_002530627.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223529837|gb|EEF31770.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1116

 Score =  313 bits (801), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 230/643 (35%), Positives = 330/643 (51%), Gaps = 97/643 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+ ++++ + +FEGS F+++VR   E  G L  LQ+Q+LS  L +   +A  +   
Sbjct: 223 KTTIARVVYEELASQFEGSSFLANVREVKEKHG-LVPLQQQLLSEILMDG-NIAIWDAHC 280

Query: 80  FTKERVRRM---KLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
            T E V RM   ++L++LDDVN++ QLK L G  D FG GSRI++TTRD+ +L K  G +
Sbjct: 281 GTSEIVNRMCKKRVLLILDDVNQLEQLKLLAGRHDWFGSGSRIIITTRDEHLL-KCHGVD 339

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
           K IY+V GL  +E+   FC  AFK ++  +D    S   V+Y  G PL L+VLGS L  K
Sbjct: 340 K-IYKVQGLSQDESIHLFCLRAFKSDYPADDYVELSNEFVNYCNGLPLALDVLGSFLFDK 398

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
             + W   L  L +I   EI    + L ISF+ L    K IFLDIACFF GEDKD+V  +
Sbjct: 399 SVNEWTSALRRLKQIPNQEI---LEKLFISFDGLEEVEKKIFLDIACFFNGEDKDYVIKV 455

Query: 257 LDDS----ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           L+         + D LI+KSL++IS   + MHD+LQEMGR+IVRQES++EPGKRSRLW  
Sbjct: 456 LESRGFYPHVGIRD-LINKSLITISKERIWMHDLLQEMGREIVRQESQEEPGKRSRLWLY 514

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
           +++  VL ++ GT+ +E I LD  + +   L  +AFT M  LR  K              
Sbjct: 515 EDVYHVLSNDTGTEQVEAIVLDSCEQEDEELSAKAFTKMKRLRFLKL------------- 561

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
                      + L  GL+YL  KLRYL WD YP ++ PS F+P  L+EL++RCS ++  
Sbjct: 562 ---------RNLHLSEGLEYLSNKLRYLEWDRYPFKSFPSTFQPNELIELHMRCSNIKHM 612

Query: 433 WEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
           W+G        I+  K L                         I+ SY VNLI+      
Sbjct: 613 WKG--------IKPLKMLK-----------------------VIDLSYSVNLIK------ 635

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSL-VTLILLGCLN 551
                       ++VP       +LE L+L GC RL  +  S   LR   +    L    
Sbjct: 636 --------TMDFKDVP-------NLEELNLEGCTRLLEVHQSIGVLREWEIAPRQLPSTK 680

Query: 552 LEHFPEILEKMEHLKRIYSDRTP---ITELPSSFENLPGLEVLFVEDCSKLDN-LPDNIG 607
           L  F  +L   +  +R  + + P      LP+ F +L  L  L +  C+  D  LP ++ 
Sbjct: 681 LWDF--LLPWQKFPQRFLTQKNPNPMAMALPALF-SLKSLRSLNLSYCNLTDGALPSDLS 737

Query: 608 SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
               L     + +    +PSS++  + L     S+CK L+SFP
Sbjct: 738 CFPLLKTFNLSGNNFVSIPSSISRLSKLEDFQFSNCKRLQSFP 780



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 123/517 (23%), Positives = 214/517 (41%), Gaps = 105/517 (20%)

Query: 547  LGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNI 606
            + C N++H  + ++ ++ LK I    +        F+++P LE L +E C++L  +  +I
Sbjct: 604  MRCSNIKHMWKGIKPLKMLKVIDLSYSVNLIKTMDFKDVPNLEELNLEGCTRLLEVHQSI 663

Query: 607  GSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL------------ 654
            G L           A  QLPS+     +L           + FP+ FL            
Sbjct: 664  GVLR------EWEIAPRQLPSTKLWDFLL---------PWQKFPQRFLTQKNPNPMAMAL 708

Query: 655  ---LGLSAMGLLHIS--DYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
                 L ++  L++S  +     +P +++    L+   LSGNNF S+P+ I ++S+L   
Sbjct: 709  PALFSLKSLRSLNLSYCNLTDGALPSDLSCFPLLKTFNLSGNNFVSIPSSISRLSKL--- 765

Query: 710  HLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCL 769
              EDF                   +CK LQS P LP  +  L + GC+ L +L       
Sbjct: 766  --EDF----------------QFSNCKRLQSFPNLPSSILFLSMEGCSALETLLPKSNSS 807

Query: 770  QYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDL 829
            Q+     C                    C RLQ LP++   + ++         + SP+L
Sbjct: 808  QFELFNIC-----------------AEGCKRLQLLPDLSSSILKISVEGFSS-KETSPNL 849

Query: 830  QWAPESLKSAAICFEFTNCLK-LNGKANNKILADS-------LLRIRHMAIASLRLGYEM 881
             +   S K + + F   N LK +  ++ N  L          LLR RH ++       ++
Sbjct: 850  -FVTHSSKPSMLTF--INILKSVEVQSENIPLVARMSGYLHYLLRHRHSSLGFFNPSTQV 906

Query: 882  AINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKK 941
            ++             L GSEIP WF+ QS GSS+ +QLPP+      +GF FC V + ++
Sbjct: 907  SV------------CLAGSEIPGWFNYQSPGSSLEMQLPPYWWTNKWMGFTFCIVFEFRE 954

Query: 942  VDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDS--DRVILGFKPCLNVGF 999
              +D    F      DL  + ++  + + LG +S  I   +D+  D++ + + P   +  
Sbjct: 955  PIADTSTIFC-----DLHAR-IAPDQDLFLGRSSVQISKELDTTLDQLWVNYIPRSCLTC 1008

Query: 1000 PDGYHHT-IATFKFFAERKFYKIKRCGLCPVYANPSE 1035
             D +  +      FF+       K CG+  +Y+  ++
Sbjct: 1009 LDKWEESDCLKMTFFSNE--LSFKYCGIRKMYSRDAD 1043


>gi|356494937|ref|XP_003516337.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1258

 Score =  312 bits (800), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 212/588 (36%), Positives = 320/588 (54%), Gaps = 68/588 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ V+++GIWGMGGIGKTT+AKAIF++    FEG  F++ +R   E   G  HLQ+Q+L 
Sbjct: 385 SNDVELLGIWGMGGIGKTTIAKAIFNKIGRNFEGRSFLAQIREAWEQDAGQVHLQEQLL- 443

Query: 64  TTLSEKLEVAGPNI---PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             + ++ +   PNI    +  KER+R  K+L++LDDVN++ QL  L G  + FG GSRI+
Sbjct: 444 FDIDKESKTKIPNIELGKNILKERLRHKKVLLILDDVNKLHQLNALCGNREWFGSGSRII 503

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRD  +L   R +  K+Y +  +  +E+ E F   AFK+    ED    SR+V++Y+ 
Sbjct: 504 ITTRDMHILRGRRVD--KVYTMKEMNEDESIELFSWHAFKQPSPREDFTELSRNVIAYSG 561

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFL 239
           G PL LEVLGS L     + W  VL  L +I   E+ +    LKISF+ L     + IFL
Sbjct: 562 GLPLALEVLGSYLFDMEVTEWKCVLEKLKKIPNDEVQEK---LKISFDGLNDDTEREIFL 618

Query: 240 DIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIV 295
           DIACFF G D++ V  IL+ SE    + + +L+++SLV++   N L MHD+L++MGR+I+
Sbjct: 619 DIACFFIGMDRNDVIHILNGSELYAENGIRVLVERSLVTVDKKNKLGMHDLLRDMGREII 678

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           R +S KEP +RSRLW  +++  VL    GT A+EG+ L L +     L   +F  M  LR
Sbjct: 679 RVKSPKEPEERSRLWFHEDVLDVLLKESGTKAVEGLTLMLPRSNTKCLSTTSFKKMKKLR 738

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
           L +F                      + V+L      L + LR+L+WD +P + +P++  
Sbjct: 739 LLQF----------------------AGVELAGDFKNLSRDLRWLYWDGFPFKCIPADLY 776

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP--SNLHFVCP 473
             +LV + L  S +   W  ++A +       + L  L+      L   P  SNL ++  
Sbjct: 777 QGSLVSIELENSNISHMW--KEALL------MEKLKILNLSHSHYLTQTPDFSNLPYLEK 828

Query: 474 VTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
           +         LI+ P       RL+       EV  +I  L D+ +++L  C  L+ +  
Sbjct: 829 LI--------LIDCP-------RLF-------EVSHTIGHLRDIVLINLEDCVSLRNLPR 866

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
           S   L+SL TLIL GCL ++   E LE+M+ L  + +DRT IT +P S
Sbjct: 867 SIYNLKSLKTLILSGCLMIDKLEEDLEQMKSLTTLIADRTAITRVPFS 914


>gi|302398863|gb|ADL36726.1| HD domain class transcription factor [Malus x domestica]
          Length = 909

 Score =  312 bits (800), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 262/764 (34%), Positives = 376/764 (49%), Gaps = 106/764 (13%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTTLA+ ++++FSH FE S F+++VR       GL HLQKQ+LS  L EK +V   ++  
Sbjct: 235 KTTLARLVYEKFSHNFEVSIFLANVR-EIYAKHGLVHLQKQLLSQILKEK-DVQVWDVYS 292

Query: 80  ---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
                K  +   K L++LDDV+++ QL++L+GE   FG GSRI+VTTRD+ +L    G E
Sbjct: 293 GITMAKSFLCNKKALLILDDVDQLNQLEKLVGEKYWFGLGSRIIVTTRDRHLLVA-HGIE 351

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
           K+ Y V  L+ +EA++ F   AFKE+   E     S+  V Y +G PL L  LGS L  +
Sbjct: 352 KQ-YEVVELDEDEAYQLFNWKAFKEDEPQEKYLELSKQFVKYARGLPLALRTLGSFLYKR 410

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
               W   L   N++ ++    ++++LKIS++ L    K IFLDIACF +  DK+ V  +
Sbjct: 411 DPYAWSSAL---NKLKQTPNRTVFEMLKISYDGLDEMEKRIFLDIACFHKWSDKERVIEV 467

Query: 257 LDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           LD        V+D+L++KSL++ISG  + MHD++QEM  +IVR ES +EPG RSRLW   
Sbjct: 468 LDSCGFCARIVIDVLVEKSLLTISGKSVCMHDLIQEMAWEIVRGESFEEPGARSRLWLRD 527

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           +I  VL  N G  AIEGI L L + +  + +P AF+ M NL+L                 
Sbjct: 528 DIFHVLTKNTGKKAIEGIVLRLREFEEAHWNPEAFSKMCNLKL----------------- 570

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
                L    ++L  G  YLP  LR+L W  YP + LP  F+P  L EL+L  SK++  W
Sbjct: 571 -----LDIDNLRLSVGPKYLPNALRFLKWSWYPSKFLPPGFQPNELTELSLPHSKIDYLW 625

Query: 434 EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG- 492
            G            KY   L                     +I+ SY  NL   P  +G 
Sbjct: 626 NG-----------IKYFRKLK--------------------SIDLSYSQNLTRTPDFTGL 654

Query: 493 -KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
             + RL L G + + E+  SI  L  L +L+ R CK +K I  +  K+ +L    L GC 
Sbjct: 655 QNLERLVLEGCTNLVEIHPSIASLKCLRILNFRNCKSIK-ILPNEVKMETLEVFDLSGCS 713

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
            ++  PE   +M+++ ++Y   T + ELP SF+ L       +E   +LD          
Sbjct: 714 KVKKIPEFGGQMKNVSKLYLGGTAVEELPLSFKGL-------IESLEELD---------- 756

Query: 611 YLYYILAAASAISQLPSSVALSNMLRSLDSSH-CKGLESFPRTFLLGLSAMGLLHISDYA 669
                L   S    L S   + N+   L S H C G    PR   L     GL   +  +
Sbjct: 757 -----LTGISIREPLSSIGPMKNL--DLSSFHGCNGPPPQPRFSFL---PSGLFPRNSLS 806

Query: 670 -VREIPQEIAYLSSLEILYLSGNNF--ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC 726
            V  +   +    SL+ L LS  N    +LP  I  +S L+ ++L   N + SLP    C
Sbjct: 807 PVNLVLASLKDFRSLKKLDLSDCNLCDGALPEDIGCLSSLKELNLGGNNFV-SLPTSIGC 865

Query: 727 ---LKYLHLIDCKMLQSLPVLPFCLE-SLDLTGCNMLRSLPELP 766
              L + +L +CK LQ LP LP      L    C  L+ LP  P
Sbjct: 866 LSKLSFFNLNNCKRLQQLPDLPLNNRIYLKTDNCTSLQMLPGPP 909


>gi|359486980|ref|XP_003633500.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 852

 Score =  312 bits (799), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 207/585 (35%), Positives = 314/585 (53%), Gaps = 71/585 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL---SEKLEVAGPN 76
           KTT+AK +++  SH+FE   F+ +VR  S+    L  LQK++L+  +   ++K+      
Sbjct: 237 KTTIAKVVYNNISHQFESRIFLENVRERSKDYSSLLQLQKELLNGVMKGKNKKISNVHEG 296

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           I +  + R    K+L++LDDV+ + QL+ L GE   FG  SRI++T+RD+  L    G +
Sbjct: 297 I-NVIRNRFHSKKVLLILDDVDNLKQLQFLAGEHSWFGPRSRIIITSRDQHCL-NVHGVD 354

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
              Y+V  L ++E+ + FC  AFK+N    D    S  VV+Y KG PL LEVLGS L  K
Sbjct: 355 AS-YKVEALSYKESIQLFCQHAFKQNIPKSDYVNLSDHVVNYVKGLPLALEVLGSFLFYK 413

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
               W   L  L    E+   ++ ++LKISF+ L  + + IFLDI CFF+G +++ V  +
Sbjct: 414 SVPEWESALQKLK---ENPNIEVQNVLKISFDGLDKKEQEIFLDIVCFFKGWNENDVTRL 470

Query: 257 LDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
           +  +   +  +L DK L+++ GN + +HD+++EMGR+IVR +  +EPGK SRLWDPK+IS
Sbjct: 471 VKHARIGI-RVLSDKCLITLCGNTITIHDLVEEMGREIVRHKHPEEPGKWSRLWDPKDIS 529

Query: 317 RVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTE 376
            VL+   GT A+E +FLD+ K + I+    AF  M  LRL K Y    +           
Sbjct: 530 LVLRKKMGTKAVEALFLDMCKSREISFTTEAFKRMRRLRLLKIYWSWGF----------- 578

Query: 377 EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE 436
                        L+Y+ K   YLHW+ Y L++LPSNF  +NL+ELNL+ S +E  W+GE
Sbjct: 579 -------------LNYMGKG--YLHWEGYSLKSLPSNFDGENLIELNLQHSNIEHLWQGE 623

Query: 437 KACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR 496
           K          + L  L+    Q L   P   HF            N+    Q++ K   
Sbjct: 624 KY--------LEELKILNLSESQQLNEIP---HFS-----------NMSNLEQLNVK--- 658

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
              G  +++ V SS+  L  L +L+LRGC++++ + ++   L SL  L L  C NLE+FP
Sbjct: 659 ---GCRSLDNVDSSVGFLKKLTLLNLRGCQKIRSLPSTIQNLVSLKKLNLYDCSNLENFP 715

Query: 557 EILEKME--HLKRIYSDRTPITELPSS-----FENLPGLEVLFVE 594
           EI+E ME  +L  +    T I     +      EN P   ++F+E
Sbjct: 716 EIMEDMECLYLLNLSGTLTTIDSGSKALEFLRLENDPNTMIIFLE 760



 Score = 47.0 bits (110), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 12/153 (7%)

Query: 654 LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLED 713
            L     G LH   Y+++ +P      + +E L L  +N E L    K + +L+ ++L +
Sbjct: 578 FLNYMGKGYLHWEGYSLKSLPSNFDGENLIE-LNLQHSNIEHLWQGEKYLEELKILNLSE 636

Query: 714 FNMLQSLPELPLC--LKYLHLIDCKMLQSLPVLPFCLESL---DLTGCNMLRSLPELP-- 766
              L  +P       L+ L++  C+ L ++      L+ L   +L GC  +RSLP     
Sbjct: 637 SQQLNEIPHFSNMSNLEQLNVKGCRSLDNVDSSVGFLKKLTLLNLRGCQKIRSLPSTIQN 696

Query: 767 -LCLQYLNLEDCNMLRSLPEL---PLCLQLLTV 795
            + L+ LNL DC+ L + PE+     CL LL +
Sbjct: 697 LVSLKKLNLYDCSNLENFPEIMEDMECLYLLNL 729


>gi|357468563|ref|XP_003604566.1| Disease resistance protein [Medicago truncatula]
 gi|355505621|gb|AES86763.1| Disease resistance protein [Medicago truncatula]
          Length = 1161

 Score =  312 bits (799), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 212/590 (35%), Positives = 316/590 (53%), Gaps = 73/590 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML- 62
           S+ V ++G+WGMGGIGKTT+AKAI+++    FEG  F++++R   E   G  +LQ+Q++ 
Sbjct: 297 SNDVLLLGMWGMGGIGKTTIAKAIYNKIGRNFEGRSFLANIREVWEQVSGQVYLQEQLMY 356

Query: 63  -----STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
                +TT  + +E +G +I    KER+   ++L+VLDDVN++ QL  L G    F  GS
Sbjct: 357 DIFKETTTKIQNIE-SGKSI---LKERLCHKRVLLVLDDVNKLDQLNALCGSCKWFAPGS 412

Query: 118 RIVVTTRDKRVLEKFRGEE-KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           RI++TTRDK +L   RG+   KIY +  ++  E+ E F   AFK+    +D +  SR+VV
Sbjct: 413 RIIITTRDKHIL---RGDRVDKIYIMKEMDESESLELFSWHAFKQTSPRDDYSEISRNVV 469

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            Y+ G PL LEVLGS L  +  S W  VL  L RI   ++H     LKIS++ L    KS
Sbjct: 470 KYSGGLPLALEVLGSYLFDREVSEWICVLEKLKRIPNDQVHKK---LKISYDGLNDTEKS 526

Query: 237 IFLDIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISG-NFLNMHDILQEMGR 292
           IFLDIACF  G D++ V  IL+         + +L+++SLV++   N L MHD+L++MGR
Sbjct: 527 IFLDIACFLIGMDRNDVILILNGCGLFAEIGISVLVERSLVTVDDKNKLGMHDLLRDMGR 586

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           +I+R++S  EP +RSRLW  +++  +L  + GT A+EG+ L L           AF  M 
Sbjct: 587 EIIREKSPMEPEERSRLWYHEDVIDILSEHTGTKAVEGLTLKLPGRSAQRFSTEAFKKMK 646

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            LRL +                       S  QL     YL K+LR+LHW+ +PL  +PS
Sbjct: 647 KLRLLQL----------------------SGAQLDGDFKYLSKQLRWLHWNGFPLTCIPS 684

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           NF  +N+V + L  S V+  W+         +Q  + L  L+      L   P       
Sbjct: 685 NFYQRNIVSIELENSNVKLVWK--------EMQRMEQLKILNLSHSHYLTQTP------- 729

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
               +FSY  NL           +L L     + EV  +I  L  + +++L+ C  L  +
Sbjct: 730 ----DFSYLPNL----------EKLVLKDCPRLSEVSHTIGHLKKVLLINLKDCTSLSNL 775

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
             +   L+SL TLIL GCL ++   E LE+ME L  + ++ T IT++P S
Sbjct: 776 PRNIYSLKSLKTLILSGCLMIDKLEEELEQMESLTTLIANNTAITKVPFS 825



 Score = 41.2 bits (95), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 4/134 (2%)

Query: 559 LEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-L 616
           +++ME LK +  S    +T+ P  F  LP LE L ++DC +L  +   IG L+ +  I L
Sbjct: 708 MQRMEQLKILNLSHSHYLTQTPD-FSYLPNLEKLVLKDCPRLSEVSHTIGHLKKVLLINL 766

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE 676
              +++S LP ++     L++L  S C  ++      L  + ++  L  ++ A+ ++P  
Sbjct: 767 KDCTSLSNLPRNIYSLKSLKTLILSGCLMIDKLEEE-LEQMESLTTLIANNTAITKVPFS 825

Query: 677 IAYLSSLEILYLSG 690
           +    S+  + L G
Sbjct: 826 VVRSKSIGFISLCG 839


>gi|297809509|ref|XP_002872638.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297318475|gb|EFH48897.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 853

 Score =  312 bits (799), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 233/682 (34%), Positives = 347/682 (50%), Gaps = 100/682 (14%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+ +GIWG  GIGKTT+A+ IF + S ++E   F+ D+    E  G  + +++  LS  L
Sbjct: 198 VRSIGIWGTVGIGKTTIAEEIFRRISVQYETCVFLKDLHKEVEVKGH-DAVREDFLSRVL 256

Query: 67  SEKLEVAGPN--IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
             +  V   +     F + R++R ++L++LDDVN+   +   +G+L+ FG GSRI++T+R
Sbjct: 257 EVEPHVIRISDIKTSFLRSRLQRKRILVILDDVNDYRDVGTFLGKLNYFGPGSRIIMTSR 316

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           ++RV    + +   +Y V  L+   +        F+    PE     S  +V ++ GNP 
Sbjct: 317 NRRVFVLCKIDH--VYEVKPLDIPTSVRLLDRGTFQIVLSPEVYKTLSLELVKFSNGNPQ 374

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICE-----SEIHDIYDILKISFNKLTPRVKSIFL 239
           VL+ L S            V  + NR+ +     S I+ I  I + S   L    +SIFL
Sbjct: 375 VLQFLSS------------VDRERNRLSQEVKTTSPIY-IPGIFERSCCGLDDNERSIFL 421

Query: 240 DIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIV 295
           DIACFF   DKD VA +LD    S       L+DKSL++IS  NF++M   +Q  GR+IV
Sbjct: 422 DIACFFNRMDKDNVAMLLDGCGFSTHVGFRGLVDKSLLTISQHNFVDMLSFIQATGREIV 481

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           RQES   PG RSRLW+ ++I  V  ++ GT AIEGIFLD+SK +  + +P  F  M NLR
Sbjct: 482 RQESADRPGDRSRLWNAEDIRDVFINDTGTTAIEGIFLDMSK-QTFDANPNVFEKMCNLR 540

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
           L K Y  K            EE+     V  P GL+YLP KLR LHW+ YPL +LP +F 
Sbjct: 541 LLKLYCSK-----------VEEK---HGVYFPQGLEYLPSKLRLLHWEFYPLSSLPESFN 586

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
           P+NLVELNL  S   + W+G+KA         ++LS  + K                   
Sbjct: 587 PENLVELNLSSSCARKLWKGKKA---------RFLSLGNLK------------------K 619

Query: 476 INFSYCVNLIEFPQISGKVTRLYL---GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
           +  SY   L + P++S      ++   G +++  +  S+  L  +  L+L+GC +L+ I 
Sbjct: 620 MKLSYSYQLTKIPRLSSAPNLEHIDLEGCNSLLSISQSVSYLKKIVFLNLKGCSKLESIP 679

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
           ++   L SL  L L GC  LE+FPEI     ++K +Y   T I E+PSS +NL  LE L 
Sbjct: 680 ST-VDLESLEVLNLSGCSKLENFPEI---SPNVKELYMGGTMIQEVPSSIKNLVLLEKLD 735

Query: 593 VEDCSKLDNLPDNIGSLEYL------------------------YYILAAASAISQLPSS 628
           +E+   L NLP +I  L++L                         ++  + +A+ +LPSS
Sbjct: 736 LENSRHLKNLPTSICKLKHLETLNLSGCTSLERFPDLSRRMKCLRFLDLSRTAVRELPSS 795

Query: 629 VALSNMLRSLDSSHCKGLESFP 650
           ++    L  L    CK L   P
Sbjct: 796 ISYLTALEELRFVDCKNLVRLP 817



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 63/258 (24%)

Query: 559 LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LA 617
           L  ++ +K  YS    +T++P    + P LE + +E C+ L ++  ++  L+ + ++ L 
Sbjct: 614 LGNLKKMKLSYS--YQLTKIPR-LSSAPNLEHIDLEGCNSLLSISQSVSYLKKIVFLNLK 670

Query: 618 AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI 677
             S +  +PS+V L + L  L+ S C  LE+FP                         EI
Sbjct: 671 GCSKLESIPSTVDLES-LEVLNLSGCSKLENFP-------------------------EI 704

Query: 678 AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM 737
           +   +++ LY+ G   + +P+ IK +  L  + LE+   L++LP     LK+        
Sbjct: 705 S--PNVKELYMGGTMIQEVPSSIKNLVLLEKLDLENSRHLKNLPTSICKLKH-------- 754

Query: 738 LQSLPVLPFCLESLDLTGCNMLRSLPELPL---CLQYLNLEDCNMLRSLPELPLCLQLLT 794
                     LE+L+L+GC  L   P+L     CL++L+L       ++ ELP  +  LT
Sbjct: 755 ----------LETLNLSGCTSLERFPDLSRRMKCLRFLDLSRT----AVRELPSSISYLT 800

Query: 795 V------RNCNRLQSLPE 806
                   +C  L  LP+
Sbjct: 801 ALEELRFVDCKNLVRLPD 818



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 40/237 (16%)

Query: 644 KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
           +GLE  P       S + LLH   Y +  +P+     + +E+     N   S    + + 
Sbjct: 559 QGLEYLP-------SKLRLLHWEFYPLSSLPESFNPENLVEL-----NLSSSCARKLWKG 606

Query: 704 SQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLP 763
            + RF+ L +      L ++ L   Y  L     L S P     LE +DL GCN L S+ 
Sbjct: 607 KKARFLSLGN------LKKMKLSYSY-QLTKIPRLSSAP----NLEHIDLEGCNSLLSIS 655

Query: 764 ELPLCLQ---YLNLEDCNMLRSLPELP--LCLQLLTVRNCNRLQSLPEILLCLQELDASV 818
           +    L+   +LNL+ C+ L S+P       L++L +  C++L++ PEI        +  
Sbjct: 656 QSVSYLKKIVFLNLKGCSKLESIPSTVDLESLEVLNLSGCSKLENFPEI--------SPN 707

Query: 819 LEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASL 875
           +++L      +Q  P S+K+  +  +    L L    + K L  S+ +++H+   +L
Sbjct: 708 VKELYMGGTMIQEVPSSIKNLVLLEK----LDLENSRHLKNLPTSICKLKHLETLNL 760


>gi|399920187|gb|AFP55534.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1038

 Score =  312 bits (799), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 263/783 (33%), Positives = 367/783 (46%), Gaps = 149/783 (19%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTTLA+ +++  SH+FE   F+++VR  S T G L HLQKQ+LS  L E+  V   ++ H
Sbjct: 200 KTTLARLVYENISHQFEVCIFLANVREVSATHG-LVHLQKQILSQILKEE-NVQVWDV-H 256

Query: 80  FTKERVRR----MKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGE 135
                ++R     ++L+VLDDV+   QLK L+GE D FG  SRI++TTR++ VL +   E
Sbjct: 257 SGITMIKRCVCNKEVLLVLDDVDHSEQLKNLVGEKDYFGLRSRIIITTRNRHVLVEHDIE 316

Query: 136 EKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
             K Y + GLE +EA + F   AF++    ED    S+S V Y +G PL L++LGS L  
Sbjct: 317 --KQYELKGLEEDEALQLFSWKAFRKIEPEEDYAEQSKSFVRYAEGLPLALKILGSFLYK 374

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           +    W      L +        +++ILKISF+ L    K  FLDIACF    D + +  
Sbjct: 375 RSLDSWSSAFQKLKQTPNP---TVFEILKISFDGLDEMEKKTFLDIACFRRLYDNESMIE 431

Query: 256 ILDDSE---SDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
            +  SE      +++L++KSL++IS GN + +HD++QEMGR+IVRQE+E EPG RSRLW 
Sbjct: 432 QVYSSELCSRIAIEVLVEKSLITISFGNHVYVHDLIQEMGREIVRQENE-EPGGRSRLWL 490

Query: 312 PKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
              I  V   N GT+  EGIFL L +++  + +  AF+ M NL+L   +           
Sbjct: 491 RNNIFHVFTKNTGTEVTEGIFLHLHELEEADWNLEAFSKMCNLKLLYIH----------- 539

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
                       ++L  G  YLP  LR L W  YP ++LP  F+P  L EL+   S ++ 
Sbjct: 540 -----------NLRLSLGPKYLPDALRILKWSWYPSKSLPPGFQPDELTELSFVHSNIDH 588

Query: 432 PWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS 491
            W G            KYL  L                     +I+ SY +NL   P  +
Sbjct: 589 LWNG-----------IKYLDKLK--------------------SIDLSYSINLTRTPDFT 617

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
           G                     + +LE L L GC  L +I  S   L+ L       C  
Sbjct: 618 G---------------------IPNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNC-- 654

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
                                  I  LPS   N+  LE   V  CSKL  +P+ +G  + 
Sbjct: 655 ---------------------KSIKSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQTKR 692

Query: 612 LYYILAAASAISQLPSSVA-LSNMLRSLDSSHCKGLESFPRTFL---LGLSAMGLL---- 663
           L  +    +A+ +LPSS+  LS  L  LD S     E     FL   L +S+ GLL    
Sbjct: 693 LSKLYLGGTAVEKLPSSIEHLSKSLVELDLSGIVIREQPYSLFLKQNLIVSSFGLLPRKS 752

Query: 664 --------------------HISDYAV--REIPQEIAYLSSLEILYLSGNNFESLPAIIK 701
                                ++D  +   EIP +I  L SL  L L GNNF SLPA I 
Sbjct: 753 PHPLIPLLASLKQFSSLTSLKLNDCNLCEGEIPNDIGSLPSLNWLELRGNNFVSLPASIH 812

Query: 702 QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI--DCKMLQSLPVLPFCLESLDLTGCNML 759
            +S+L +I LE+   LQ LPELP    YL++   DC  L   P  P  L    LT  N L
Sbjct: 813 LLSKLSYIDLENCKRLQQLPELPAS-DYLNVATDDCTSLLVFPDPP-DLSRFSLTAVNCL 870

Query: 760 RSL 762
            ++
Sbjct: 871 STV 873


>gi|356524097|ref|XP_003530669.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1447

 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 271/829 (32%), Positives = 412/829 (49%), Gaps = 94/829 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ V+++G++GMGG+GKTTLAKA+F+   + FE  CF+S+VR  S    GL  L+ +++ 
Sbjct: 210 SNGVKVLGLYGMGGVGKTTLAKALFNNLLNHFEHRCFISNVREVSSKQDGLVSLRTKIIE 269

Query: 64  TTLSEKLEVAGPNIPHFTKERV--RRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
               E      P  P    + V  R  ++L+VLDDV++V QL  LIG+ + F  GSR+++
Sbjct: 270 DLFPE------PGSPTIISDHVKARENRVLLVLDDVDDVKQLDALIGKREWFYDGSRVII 323

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRD  +++    E   +Y V  L F+EA E F N A + N  PE+    S+ +VS T  
Sbjct: 324 TTRDTVLIKNHVNE---LYEVEELNFDEALELFSNHALRRNKPPENFLNLSKKIVSLTGR 380

Query: 182 NPLVLEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            PL LEV GS L  KR+   W   +  L +I    + D+   LKIS++ L    K IFLD
Sbjct: 381 MPLALEVFGSFLFDKRRVEEWEDAVEKLRQIRPKHLQDV---LKISYDALDEEEKCIFLD 437

Query: 241 IACFF--EGEDKDFVASILDD---SESDVLDILIDKSLVSISG--NFLNMHDILQEMGRQ 293
           +AC F   G  +D V  +L          + +L+ K L+ I+   N L MHD +++MGRQ
Sbjct: 438 MACLFVQMGMKRDDVIDVLRGCGFRGEIAITVLVQKCLIKITDEDNTLWMHDQIRDMGRQ 497

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIK--------GINLDP 345
           IV  ES  +PGKRSRLWD  EI  VLK + GT  I+GI LD  + +        G + + 
Sbjct: 498 IVVDESIVDPGKRSRLWDRAEIMSVLKGHMGTRCIQGIVLDFEEDRFYRSKAESGFSTNL 557

Query: 346 RAFTNMSN---------LRLFKFYVPKFYEIEK--LPSMSTEEQLSYSKVQLPNGL---D 391
           +  +++ N         L L  +  P+  E ++  L + S E  ++  ++Q+ N      
Sbjct: 558 QWRSSLRNVLGGIIEQCLCLKNYLHPQAEENKEVILHTKSFEPMVNLRQLQINNRRLEGK 617

Query: 392 YLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSK-VEQPWEGEKACVPSSIQNFKYL 450
           +LP +L++L W   PL+ +P    P+ L  L+L+ SK +E  W      VP ++      
Sbjct: 618 FLPAELKWLQWQGCPLKHMPLKSWPRELAVLDLKNSKKIETLWGWNDYKVPRNL------ 671

Query: 451 SALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG--KVTRLYLGQSA-IEEV 507
                                  + +N SYC+ L   P +SG  ++ ++ L     +  +
Sbjct: 672 -----------------------MVLNLSYCIELTAIPDLSGCRRLEKIDLENCINLTNI 708

Query: 508 PSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKR 567
             SI  L+ L  L L  C  L  +      L+ L +L L GC  L+  PE +  ++ LK 
Sbjct: 709 HDSIGSLSTLRSLKLTRCSSLINLPIDVSGLKQLESLFLSGCTKLKSLPENIGILKSLKA 768

Query: 568 IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPS 627
           +++D T ITELP S   L  LE L +E C  L  LP +IG L  L  +    S + +LP 
Sbjct: 769 LHADGTAITELPRSIFRLTKLERLVLEGCKHLRRLPSSIGHLCSLKELSLYQSGLEELPD 828

Query: 628 SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
           S+   N L  L+   C+ L   P + +  L ++  L  +   ++E+P  I  L  L  L 
Sbjct: 829 SIGSLNNLERLNLMWCESLTVIPDS-IGSLISLTQLFFNSTKIKELPSTIGSLYYLRELS 887

Query: 688 LSGNNFES-LPAIIKQMSQLRFIHLEDFNMLQSLP----ELPLCLKYLHLIDCKMLQSLP 742
           +    F S LP  IK ++ +  + L D   +  LP    E+ L L+ L +++CK L+ LP
Sbjct: 888 VGNCKFLSKLPNSIKTLASVVELQL-DGTTITDLPDEIGEMKL-LRKLEMMNCKNLEYLP 945

Query: 743 V----LPFCLESLDLTGCNMLRSLPELPLCLQ---YLNLEDCNMLRSLP 784
                L F L +L++   N +R LPE    L+    L L  C ML  LP
Sbjct: 946 ESIGHLAF-LTTLNMFNGN-IRELPESIGWLENLVTLRLNKCKMLSKLP 992



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 170/395 (43%), Gaps = 69/395 (17%)

Query: 440  VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT------------------------ 475
            +P SI     L  L  +GC+ LR  PS++  +C +                         
Sbjct: 779  LPRSIFRLTKLERLVLEGCKHLRRLPSSIGHLCSLKELSLYQSGLEELPDSIGSLNNLER 838

Query: 476  INFSYCVNLIEFPQISGKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
            +N  +C +L   P   G +   T+L+   + I+E+PS+I  L  L  L +  CK L ++ 
Sbjct: 839  LNLMWCESLTVIPDSIGSLISLTQLFFNSTKIKELPSTIGSLYYLRELSVGNCKFLSKLP 898

Query: 533  TSFCKLRSLVTLILLG-----------------------CLNLEHFPEILEKMEHLKRIY 569
             S   L S+V L L G                       C NLE+ PE +  +  L  + 
Sbjct: 899  NSIKTLASVVELQLDGTTITDLPDEIGEMKLLRKLEMMNCKNLEYLPESIGHLAFLTTLN 958

Query: 570  SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSV 629
                 I ELP S   L  L  L +  C  L  LP +IG+L+ LY+     + ++ LP S 
Sbjct: 959  MFNGNIRELPESIGWLENLVTLRLNKCKMLSKLPASIGNLKSLYHFFMEETCVASLPESF 1018

Query: 630  ALSNMLRSL-----------DSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR------E 672
               + LR+L           ++S     E    +F+L  S   L  +++   R      +
Sbjct: 1019 GRLSSLRTLRIAKRPNLNTNENSFLAEPEENHNSFVLTPSFCNLTLLTELDARSWRISGK 1078

Query: 673  IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
            IP E   LS LE L L  N+F+ LP+ +K +S L+ + L +   L SLP LP  L  L++
Sbjct: 1079 IPDEFEKLSQLETLKLGMNDFQKLPSSLKGLSILKVLSLPNCTQLISLPSLPSSLIELNV 1138

Query: 733  IDCKMLQSLPVLPF--CLESLDLTGCNMLRSLPEL 765
             +C  L+++  +     L+ L LT C  +R +P L
Sbjct: 1139 ENCYALETIHDMSNLESLKELKLTNCVKVRDIPGL 1173


>gi|297804202|ref|XP_002869985.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315821|gb|EFH46244.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1122

 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 213/601 (35%), Positives = 320/601 (53%), Gaps = 83/601 (13%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V+IVG+WGM GIGKT++A+ IF   + +++   F+ D    S+  G L  ++    S   
Sbjct: 546  VEIVGLWGMAGIGKTSIAREIFGILAPKYDFCYFLQDFYLMSQKKG-LRQMRDDFFSKVF 604

Query: 67   -SEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
              EKL ++  +I P F ++   +  +L+VLDDV++    + ++G    F QG RI++T+R
Sbjct: 605  REEKLSISAYDIKPSFMRDWFHKKTILLVLDDVSDARDAEAVVGGFGWFSQGHRIILTSR 664

Query: 125  DKRVLEKFRGEEKKIYRVNGL-EFEEAFEHFCNFAFKENHCPEDLNWHSRSV---VSYTK 180
             K+VL + +  E   Y++  L EFE               C + LN  S  +   +S + 
Sbjct: 665  RKQVLVQCKVTES--YKIQKLCEFESL-----------RLCKQYLNEESGVILELMSCSS 711

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            G PL L+VLG SL  +  ++  + LH L +   ++I + +   +  F+ L    K+IFLD
Sbjct: 712  GIPLALKVLGFSLSKQHINNLKEHLHSLRKNPPTQIQEAF---RRCFDGLDENEKNIFLD 768

Query: 241  IACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
            +ACFF GED D V  +LD     +   + D LID+SL+S+  N + +    Q++GR IV 
Sbjct: 769  LACFFSGEDIDHVVKLLDACGFFTYLGICD-LIDESLISLLDNRIEIPIPFQDIGRFIVH 827

Query: 297  QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
            +E E +P +RSRLWD  +I+ VL++N GT+AIEGIFLD S +    L P  F  M NLRL
Sbjct: 828  EEDE-DPCERSRLWDSNDIADVLRNNSGTEAIEGIFLDASDLT-CELSPTVFGKMYNLRL 885

Query: 357  FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
             KFY             ST E  +  K+ LP GLD LP +LR LHW+ YPL  LP  F P
Sbjct: 886  LKFYC------------STSE--NECKLNLPQGLDTLPDELRLLHWENYPLEYLPHKFNP 931

Query: 417  KNLVELNLRCSKVEQPWEGEK----------------------------------AC--- 439
            +NLVE+++  S +E+ WEG+K                                   C   
Sbjct: 932  ENLVEIHMPYSNMEKLWEGKKNLEKLKNIKLSHSRKLTDILMLSEALNLEHIDLEGCTSL 991

Query: 440  --VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL 497
              V +SI++   L +L+ K C  L++ PS ++      +NFS C  L E    +  +  L
Sbjct: 992  IDVSTSIRHLGKLVSLNMKDCSRLQTLPSMVNLTSLKRLNFSGCSELDEIQDFAPNLEEL 1051

Query: 498  YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPE 557
            YL  +AI E+P SIE LT+L  LDL  C+RL+++      L+S+V L L GC +L+ FP+
Sbjct: 1052 YLAGTAIREIPLSIENLTELVTLDLENCRRLQKLPMGISSLKSIVELKLSGCTSLQSFPK 1111

Query: 558  I 558
            +
Sbjct: 1112 L 1112



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 8/196 (4%)

Query: 552  LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
            LE+ P      E+L  I+   + + +L    +NL  L+ + +    KL ++     +L  
Sbjct: 922  LEYLPHKFNP-ENLVEIHMPYSNMEKLWEGKKNLEKLKNIKLSHSRKLTDILMLSEALNL 980

Query: 612  LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR 671
             +  L   +++  + +S+     L SL+   C  L++ P   ++ L+++  L+ S     
Sbjct: 981  EHIDLEGCTSLIDVSTSIRHLGKLVSLNMKDCSRLQTLPS--MVNLTSLKRLNFS--GCS 1036

Query: 672  EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY-- 729
            E+ +   +  +LE LYL+G     +P  I+ +++L  + LE+   LQ LP     LK   
Sbjct: 1037 ELDEIQDFAPNLEELYLAGTAIREIPLSIENLTELVTLDLENCRRLQKLPMGISSLKSIV 1096

Query: 730  -LHLIDCKMLQSLPVL 744
             L L  C  LQS P L
Sbjct: 1097 ELKLSGCTSLQSFPKL 1112



 Score = 40.0 bits (92), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 46/196 (23%)

Query: 644  KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
            +GL++ P         + LLH  +Y +  +P +    + +EI ++  +N E L    K +
Sbjct: 903  QGLDTLP-------DELRLLHWENYPLEYLPHKFNPENLVEI-HMPYSNMEKLWEGKKNL 954

Query: 704  SQLRFIHLE--------------------DFNMLQSLPELPLCLKYL------HLIDCKM 737
             +L+ I L                     D     SL ++   +++L      ++ DC  
Sbjct: 955  EKLKNIKLSHSRKLTDILMLSEALNLEHIDLEGCTSLIDVSTSIRHLGKLVSLNMKDCSR 1014

Query: 738  LQSLPVLP--FCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLT- 794
            LQ+LP +     L+ L+ +GC+ L  + +    L+ L L       ++ E+PL ++ LT 
Sbjct: 1015 LQTLPSMVNLTSLKRLNFSGCSELDEIQDFAPNLEELYLAGT----AIREIPLSIENLTE 1070

Query: 795  -----VRNCNRLQSLP 805
                 + NC RLQ LP
Sbjct: 1071 LVTLDLENCRRLQKLP 1086


>gi|297794829|ref|XP_002865299.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311134|gb|EFH41558.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1132

 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 224/678 (33%), Positives = 338/678 (49%), Gaps = 100/678 (14%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+ VGIWGM GIGKTTLAKA+FDQ S EF+ SCF+ D        G    L++  L    
Sbjct: 163 VRCVGIWGMPGIGKTTLAKAVFDQMSGEFDASCFIEDFDKVIHEKGVYRLLEEHFLKEKP 222

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
                +   ++      ++   ++L+VLDD+      + L+G    FG  S I++T+RDK
Sbjct: 223 GTDSTITKLSL---LSNKLNNKRVLVVLDDLRNPLIAEPLLGGFHWFGPESLIIITSRDK 279

Query: 127 RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVL 186
           +VL   R  +  IY V GL  +EA + F   A  +N   ++L   S  V+ Y  GNPL L
Sbjct: 280 QVLRLCRVNQ--IYEVQGLNKKEALQLFLRSASIKNKGEQNLKELSMKVIEYANGNPLAL 337

Query: 187 EVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFE 246
            + G  L  K K H  ++     ++       I D  K S+  L  R K+IFLDIACFFE
Sbjct: 338 SIYGREL--KGKKHLSEMETTFLKLKGHPPFKIVDAFKSSYESLNDREKNIFLDIACFFE 395

Query: 247 GEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEP 303
           GE+ D+V  +L+         +D+L++K LV+IS N + MH+++Q++GR+I+ +E+  + 
Sbjct: 396 GENVDYVMQLLEGCGFLPHVGIDVLVEKCLVTISENRVWMHNLIQDVGREIINKET-VQI 454

Query: 304 GKRSRLWDPKEISRVLKHN----------------KGTDAIEGIFLDLSKIKGINLDPRA 347
            +RSRLW P  I  +L+ N                KG + IEGIFLD S I   + +P A
Sbjct: 455 ERRSRLWKPGNIKYLLEDNRGKEENGDPKTTSKRAKGLEQIEGIFLDTSNI-SFDAEPSA 513

Query: 348 FTNMSNLRLFKFYV--PKFYEIEKLPSMSTEEQLSYSKVQLPNG-LDYLPKKLRYLHWDT 404
           F NM NLRL K Y   P+ Y +                +  PNG L YLP +LR LHW+ 
Sbjct: 514 FENMLNLRLLKIYCSNPEIYPV----------------INFPNGSLRYLPNELRLLHWEN 557

Query: 405 YPLRTLPSNFKPKNLVELNLRCSKVEQPW---------------EGEKACVPSSIQNFKY 449
           YPL++LP NF PK+LVE+N+  S++++ W                 ++    S +    +
Sbjct: 558 YPLQSLPQNFDPKHLVEINMPNSQLQKLWGKTKNLEMLKTVRLCHSQQLVDISDLWEAPH 617

Query: 450 LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPS 509
           L  +  +GC  L+SFP+   F+    +N S+C+ + + P++   + +L+L  + I  +P 
Sbjct: 618 LEVIDLQGCTRLQSFPNTGQFLHLRVLNLSHCIEIKKIPEVPPNIKKLHLQGTGIIALPL 677

Query: 510 S----------IECLTDLEVL-DLRGCKRLKR--ISTSFCK-LRSLVTLILLGCLNLEHF 555
           S          +  LT+   L D    +RL+   IS+S+C+ L  L+ L L  C  L+  
Sbjct: 678 STTFEPNHTKLLNFLTENPGLSDALKLERLRSLLISSSYCQVLGKLIRLDLKDCSRLQSL 737

Query: 556 PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
           P ++                        NL  LEVL +  CSKL+ +     +L+ LY  
Sbjct: 738 PNMV------------------------NLEFLEVLELSGCSKLETIQGFPPNLKELYIA 773

Query: 616 LAAASAISQLPSSVALSN 633
             A   + QLP S+ L N
Sbjct: 774 RTAVRQVPQLPQSLELFN 791



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 5/86 (5%)

Query: 221  DILKISFNKLTPRVKSIFLDIACFFEGEDKDFVA----SILDDSESDVLDILIDKSLVSI 276
            ++ +++++ L    K++FL IA  F  ED   VA    +I+D   S  L +L D+SL+S+
Sbjct: 1025 EVWRVNYDGLQEIDKALFLYIAGLFNDEDVGLVAPLIANIIDMDVSYGLKVLADRSLISV 1084

Query: 277  SGNF-LNMHDILQEMGRQIVRQESEK 301
            S N  + MH +L++MG++I+   S K
Sbjct: 1085 SSNGEIVMHYLLRQMGKEILHCSSYK 1110



 Score = 40.4 bits (93), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 128/577 (22%), Positives = 221/577 (38%), Gaps = 123/577 (21%)

Query: 562  MEHLKRIYSDRTPIT--ELPSSFENLPGLEVLFVEDCSKLD-----NLPDNIGSLEYLYY 614
            +E ++ I+ D + I+    PS+FEN+  L +L +  CS  +     N P+  GSL YL  
Sbjct: 492  LEQIEGIFLDTSNISFDAEPSAFENMLNLRLLKIY-CSNPEIYPVINFPN--GSLRYLPN 548

Query: 615  ILA----AASAISQLPSSVALSNMLR-SLDSSHCKGLESFPRTFLLGLSAMGLLH----- 664
             L         +  LP +    +++  ++ +S  + L    +   + L  + L H     
Sbjct: 549  ELRLLHWENYPLQSLPQNFDPKHLVEINMPNSQLQKLWGKTKNLEM-LKTVRLCHSQQLV 607

Query: 665  -ISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE 722
             ISD  + E P        LE++ L G    +S P    Q   LR ++L     ++ +PE
Sbjct: 608  DISD--LWEAPH-------LEVIDLQGCTRLQSFPNT-GQFLHLRVLNLSHCIEIKKIPE 657

Query: 723  LPLCLKYLHLIDCKMLQSLP-----------VLPFCLESLDLTGCNMLRSLPELPLCLQY 771
            +P  +K LHL    ++ +LP           +L F  E+  L+    L  L  L +   Y
Sbjct: 658  VPPNIKKLHLQGTGII-ALPLSTTFEPNHTKLLNFLTENPGLSDALKLERLRSLLISSSY 716

Query: 772  ---------LNLEDCNMLRSLPELPLC--LQLLTVRNCNRLQSLPEILLCLQELDASVLE 820
                     L+L+DC+ L+SLP +     L++L +  C++L+++      L+EL   +  
Sbjct: 717  CQVLGKLIRLDLKDCSRLQSLPNMVNLEFLEVLELSGCSKLETIQGFPPNLKEL--YIAR 774

Query: 821  KLSKHSPDLQWAPESLKSAA------IC---------FEFTNCLKLNGKANNKILADSLL 865
               +  P L  + E   +        IC         + F+NC  L+ +  N  L   L 
Sbjct: 775  TAVRQVPQLPQSLELFNAHGCLSLELICLDSSKLLMHYTFSNCFNLSPQVINDFLVKVLA 834

Query: 866  RIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSS------GSSICIQL 919
              +H+              ++L+E       +P         NQ S      G S+  +L
Sbjct: 835  NAQHIPRER---------QQELNESPAFSFCVPSH------GNQYSKLDLQPGFSVMTRL 879

Query: 920  PPHSSCRN-LIGFAFC--AVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSR 976
             P  S RN L+GFA            D+  F    V    + E      +  ++   +  
Sbjct: 880  NP--SWRNTLVGFAMLVEVAFSEDYCDTTGFGISCVCRWKNKE----GHSHRIERNLHCW 933

Query: 977  YIEDLIDSDRVI----LGFKPCLNVGFPDGYHHTIATFKFFAERKFYK-------IKRCG 1025
             +   +  D +     +  +P  N G        +  F+FF   K  K       +KRCG
Sbjct: 934  ALGKAVQKDHMFVFCDVNMRPSTNEGNDPNIWADLVVFEFFPINKQKKPLDDCCTVKRCG 993

Query: 1026 LCPVYANPSET---------KDNTFTINFATEVWKLD 1053
            +  + A    T           N    +   EVW+++
Sbjct: 994  VRVITAATGSTSLENILPVLSSNPMKFSGNEEVWRVN 1030


>gi|27764547|gb|AAO23077.1| R 8 protein [Glycine max]
          Length = 892

 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 251/758 (33%), Positives = 369/758 (48%), Gaps = 101/758 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V I+GI GMGG+GKTTLA A+ +  +  F+ SCF+ +VR  S    GL+HLQ  
Sbjct: 204 VGSHDVVHIIGIHGMGGLGKTTLALAVHNFIALHFDESCFLQNVREES-NKHGLKHLQSI 262

Query: 61  MLSTTLSEK--LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS  L EK     +        + R++R K+L++LDDV++  QLK ++G  D FG GSR
Sbjct: 263 LLSKLLGEKDITLTSWQEGASMIQHRLQRKKVLLILDDVDKRQQLKAIVGRPDWFGPGSR 322

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRDK +L+    E ++ Y V  L    A +     AFK              VV+Y
Sbjct: 323 VIITTRDKHLLKYH--EVERTYEVKVLNQSAALQLLTWNAFKREKIDPSYEDVLNRVVTY 380

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+GS+L  K  + W   +    RI   EI +I   LK+SF+ L    K++F
Sbjct: 381 ASGLPLALEVIGSNLFEKTVAEWESAMEHYKRIPSDEIQEI---LKVSFDALGEEQKNVF 437

Query: 239 LDIACFFEGEDKDFVASILDDSESDV----LDILIDKSLVSISG-NFLNMHDILQEMGRQ 293
           LDIAC F+G +   V +IL D   +     + +L++KSLV +S  + + MHD++Q+MGR+
Sbjct: 438 LDIACCFKGYEWTEVDNILRDLYGNCTKHHIGVLVEKSLVKVSCCDTVEMHDMIQDMGRE 497

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS---KIKGINLDPRAFTN 350
           I RQ S +EPGK  RL  PK+I +VLK N GT  IE I LD S   K + +  +  AF  
Sbjct: 498 IERQRSPEEPGKCKRLLLPKDIIQVLKDNTGTSKIEIICLDFSISDKEETVEWNENAFMK 557

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M NL++      KF                        G +Y P+ LR L W  YP   L
Sbjct: 558 MKNLKILIIRNCKF----------------------SKGPNYFPEGLRVLEWHRYPSNCL 595

Query: 411 PSNFKPKNLVELNLRCSKVEQ-PWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLH 469
           PSNF P NLV   L  S +    + G       S +   +L+ L+F  C+ L   P    
Sbjct: 596 PSNFDPINLVICKLPDSSITSFEFHG-------SSKKLGHLTVLNFDRCEFLTKIPDVSD 648

Query: 470 FVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
                 ++F++C +L+                     V  SI  L  L+ L   GC++L 
Sbjct: 649 LPNLKELSFNWCESLV--------------------AVDDSIGFLNKLKTLSAYGCRKL- 687

Query: 530 RISTSF--CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
              TSF    L SL TL L GC +LE+FPEIL +M+++  +     PI ELP SF+NL G
Sbjct: 688 ---TSFPPLNLTSLETLNLGGCSSLEYFPEILGEMKNITVLALHDLPIKELPFSFQNLIG 744

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYL--YYILAAASAISQLPSSVALSNMLRSL---DSSH 642
           L  L+++ C  +  L  ++ ++  L  + I  + +    + S      ++ S+   +++ 
Sbjct: 745 LLFLWLDSCG-IVQLRCSLATMPKLCEFCITDSCNRWQWVESEEGEEKVVGSILSFEATD 803

Query: 643 CKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
           C   + F   F +G                    + YL+      L GNNF  LP   K+
Sbjct: 804 CNLCDDF---FFIGSKRFA--------------HVGYLN------LPGNNFTILPEFFKE 840

Query: 703 MSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           +  L  + + D   LQ +  LP  LK+    +C  L S
Sbjct: 841 LQFLTTLVVHDCKHLQEIRGLPPNLKHFDARNCASLTS 878


>gi|356528847|ref|XP_003533009.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1137

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 245/748 (32%), Positives = 381/748 (50%), Gaps = 113/748 (15%)

Query: 21  TTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEV-AGPNIPH 79
           TTLA AIF + S ++EG+CF+ +V   S+  G L +   ++ S  L E + +     IP 
Sbjct: 224 TTLAAAIFHKVSFQYEGTCFLENVAEESKRHG-LNYACNKLFSKLLREDINIDTNKVIPS 282

Query: 80  FTKERVRRMKLLIVLDDVNEVGQLKRLIGE-LDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              +R+RR K+ IVLDDVN    L+ L+G   +  G GSR++VTTRD+ VL K RG EK 
Sbjct: 283 NVPKRLRRKKVFIVLDDVNTPQLLENLVGAGAEWLGAGSRVIVTTRDRHVL-KSRGVEK- 340

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           I+ V  + F  + + F   AF + +  E+    S+ V+ Y KG PL L+VLGS L  K +
Sbjct: 341 IHEVKEMNFHNSLKLFSLNAFGKTYPTEEYEELSKRVMVYAKGIPLALKVLGSFLRSKSE 400

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
           + W   L  L +I   EI  +   L++S++ L    K+IFLDIACFF+G+  D V  +L+
Sbjct: 401 NEWDSALTKLKKIPNQEIQTV---LRLSYDGLDDGDKNIFLDIACFFKGQKGDSVTKVLN 457

Query: 259 DS--ESDV-LDILIDKSLVSISGNF--------LNMHDILQEMGRQIVRQESEKEPGKRS 307
                +D+ +  L+DK+L++ + +         ++MHD++QEMGR IVR+ES   PG+RS
Sbjct: 458 ACGFSADIGIKNLLDKALITTTTDMHDSTTDSCIDMHDLIQEMGRGIVREESIDNPGQRS 517

Query: 308 RLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV--PKFY 365
           RLWDP+E++ VL +N GT AI+GI+L++S+I+ I L  ++F  M NLRL  F      F 
Sbjct: 518 RLWDPEEVNDVLTNNTGTGAIQGIWLEMSQIQDIKLSSKSFRKMPNLRLLAFQSLNGNFK 577

Query: 366 EIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLR 425
            I              + V LP GL++LPKKLRYL W+  PL +LPS F P+ LVEL++R
Sbjct: 578 RI--------------NSVYLPKGLEFLPKKLRYLGWNGCPLESLPSTFCPEKLVELSMR 623

Query: 426 CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLI 485
            S V++ W G        +QN   L  +   GC                 IN   C NL 
Sbjct: 624 YSNVQKLWHG--------VQNLPNLEKIDLFGC-----------------INLMECPNL- 657

Query: 486 EFPQISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
               ++ K+ ++ +    ++  V  SI  L  LE+L++ GC  LK + ++          
Sbjct: 658 ---SLAPKLKQVSISHCESLSYVDPSILSLPKLEILNVSGCTSLKSLGSNTWS------- 707

Query: 545 ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
                             + L+ +Y + + + ELP S  ++  L++        L +LP+
Sbjct: 708 ------------------QSLQHLYLEGSGLNELPPSVLHIKDLKIFASSINYGLMDLPE 749

Query: 605 NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLH 664
           N  +      I+ +A       +   L  +L S       G +          S  GL  
Sbjct: 750 NFSN-----DIVLSAPREHDRDTFFTLHKILYS------SGFQ----------SVTGLTF 788

Query: 665 ISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
            +  ++ EIP  I+ LSSL  L    +N  SLP  +K + +L  + + +  ML+ +P LP
Sbjct: 789 YNCQSLGEIPDSISLLSSLLFLSFLHSNIISLPESLKYLPRLHRLCVGECKMLRRIPALP 848

Query: 725 LCLKYLHLIDCKMLQSLPVLPFCLESLD 752
             ++   + +C+ LQ+  VL   +E L+
Sbjct: 849 QSIQCFLVWNCQSLQT--VLSSTIEPLE 874


>gi|357478613|ref|XP_003609592.1| TIR-NBS-LRR RCT1 resistance protein, partial [Medicago truncatula]
 gi|355510647|gb|AES91789.1| TIR-NBS-LRR RCT1 resistance protein, partial [Medicago truncatula]
          Length = 871

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 213/595 (35%), Positives = 322/595 (54%), Gaps = 74/595 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML- 62
           S+ V ++GIWGMGG GKTT+AKAI++Q  ++FEG  F+ ++R   ET   L  LQ+Q+L 
Sbjct: 215 SEDVSLLGIWGMGGTGKTTIAKAIYNQIGNKFEGRSFLLNIREFWETNINLVSLQQQLLC 274

Query: 63  ----STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
               +TT   +   +G N     KER+ + ++LIVLDDVNE+ QLK L G  + FG GSR
Sbjct: 275 DVYKTTTFKIRDIESGKNT---LKERLSQNRVLIVLDDVNELDQLKALCGSREWFGPGSR 331

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I++TTRD  +L   R +E  +Y +  +   E+ E F   AF +    +D   HS  V++Y
Sbjct: 332 IIITTRDMHLLRSCRVDE--VYTIEEMGDSESLELFSWHAFNQPSPTKDFATHSTDVIAY 389

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSI 237
           +   PL L+VLGS L     S W K+L  L  I   ++      LK+SF+ L     K I
Sbjct: 390 SGRLPLALQVLGSYLSDCEISEWQKMLEKLKCIPHDQVQKK---LKVSFDGLKDVTEKQI 446

Query: 238 FLDIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSISG-NFLNMHDILQEMGRQ 293
           FLDIACFF G D++    IL+ S   +D+ + +L+++SLV++   N L MHD+L++MGRQ
Sbjct: 447 FLDIACFFIGMDRNDAIQILNGSGFFADIGIKVLVERSLVTVDNRNKLRMHDLLRDMGRQ 506

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IV +ES  +P  RSRLW  +E+  ++  +KGT+A++G+ L+  +   ++L+ +AF  M+ 
Sbjct: 507 IVYEESPFDPETRSRLWRREEVFDIISKHKGTEAVKGLALEFPRKNTVSLNTKAFKKMNK 566

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LRL                      L  S VQL     YL  +LR+L+W  +P    P+ 
Sbjct: 567 LRL----------------------LQLSGVQLNGDFKYLSGELRWLYWHGFPSTYTPAE 604

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           F+  +LV + L+ S ++Q W+  +      ++N K L                       
Sbjct: 605 FQQGSLVSIELKYSSLKQIWKKSQL-----LENLKIL----------------------- 636

Query: 474 VTINFSYCVNLIEFPQIS--GKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
              N S+  +LIE P  S    + +L L     +  V  SI  L  L +++L  C  L++
Sbjct: 637 ---NLSHSWDLIETPDFSFMPNLEKLVLKDCPRLTAVSRSIGSLHKLLLINLTDCTSLQK 693

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL 585
           +  S  KL+SL TLIL GC  ++   E LE+ME LK + +D+T IT++P S   L
Sbjct: 694 LPRSIYKLKSLETLILSGCSKIDKLEEDLEQMESLKTLIADKTAITKVPFSIVRL 748


>gi|147771313|emb|CAN73963.1| hypothetical protein VITISV_034210 [Vitis vinifera]
          Length = 1384

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 213/618 (34%), Positives = 328/618 (53%), Gaps = 35/618 (5%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
           KTT+A+AI+++ S++++GS F+ +VR  S+  G    LQ ++L   L  K      NI  
Sbjct: 96  KTTIAQAIYNEISYQYDGSSFLRNVRERSK--GDTLQLQNELLHGILKGK-GFKISNIDE 152

Query: 79  --HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
             +  K  +   ++L++ DDV+E+ QL+ L  E D F   S I++T+RDK+VL ++  + 
Sbjct: 153 GVNMIKRCLNSKRVLVIFDDVDELTQLEYLADEKDWFKVKSTIIITSRDKQVLAQYGVDT 212

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
              Y V+    +EA E F  +AFKEN         S +++ Y  G PL L++LG+SL  K
Sbjct: 213 P--YEVHKFNEKEAIELFSLWAFKENLPKGAYKNLSYNMIEYADGLPLALKLLGASLFGK 270

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
           + S W   L+ L RI   EI+ +   L+ISF+ L    K IFLD+ACFF+G+DKDFV+ I
Sbjct: 271 KISEWESALYKLKRIPHMEINKV---LRISFDGLDDMDKEIFLDVACFFKGKDKDFVSRI 327

Query: 257 LDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
           L       +  L DK L++IS N ++MHD++Q+MGR+I+RQE  ++ G+RSR+WD  +  
Sbjct: 328 LGPHAEYGIATLNDKCLITISKNMIDMHDLIQQMGREIIRQECPEDLGRRSRIWD-SDAY 386

Query: 317 RVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTE 376
            VL  N GT AI+ +FL++ K         +F  M  LRL K +    Y+   +      
Sbjct: 387 NVLTRNMGTRAIKALFLNICKFNPTQFTEESFKQMDGLRLLKIHKDDDYDRISIFRSYPH 446

Query: 377 EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE 436
            +L +S+  LP   ++   +L Y HWD Y L +LP+NF  K+L  L LR S ++Q W G 
Sbjct: 447 GKL-FSEDHLPRDFEFPSYELTYFHWDGYSLESLPTNFHAKDLAALILRGSNIKQLWRGN 505

Query: 437 KACVPSSIQNFKY---------------LSALSFKGCQSLRSFPSNLH-FVCPVTINFSY 480
           K      + N  +               L  L  KGC++L   P +++ +    T++   
Sbjct: 506 KLHNKLKVINLSFSVHLTEIPDFSSVPNLEILILKGCENLECLPRDIYKWKHLQTLSCGE 565

Query: 481 CVNLIEFPQISG---KVTRLYLGQSAIEEVP--SSIECLTDLEVLDLRGCKRLKRISTSF 535
           C  L  FP+I G   K+  L L  +AIEE+P  SS E L  L++L    C +L +I    
Sbjct: 566 CSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSKLNKIPIDV 625

Query: 536 CKLRSLVTLILLGCLNLE-HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
           C L SL  L L  C  +E   P  + ++  LK +         +P++   L  L+VL + 
Sbjct: 626 CCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRLQVLNLS 685

Query: 595 DCSKLDNLPDNIGSLEYL 612
            C  L+++P+   SL  L
Sbjct: 686 HCQNLEHVPELPSSLRLL 703



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 121/239 (50%), Gaps = 30/239 (12%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S ++E+P  IE   +L+ L LR C+ LK + TS C+ + L T    GC  LE FPEILE 
Sbjct: 927  SDMQELPI-IENPLELDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFPEILED 985

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAAS 620
            ME L+++  D + I E+PSS + L GL+ L +  C  L NLP++I +L  L  + + +  
Sbjct: 986  MEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTITSCP 1045

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
             + +LP ++     L+SL+S H K  +S        L ++ +L                 
Sbjct: 1046 ELKKLPENLG---RLQSLESLHVKDFDSMN----CQLPSLSVL----------------- 1081

Query: 681  SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ 739
              LEI   + N   SLP  I Q+ +L F+ L    +LQ +P LP  + Y+    C  L+
Sbjct: 1082 --LEI--FTTNQLRSLPDGISQLHKLGFLDLSHCKLLQHIPALPSSVTYVDAHQCTSLK 1136



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 116/245 (47%), Gaps = 43/245 (17%)

Query: 414  FKPKNLVELNLRCSKVEQPWEGEKACV---------PSSIQNFKYLSALSFKGCQSLRSF 464
            FK  ++ EL +    +E P E +  C+         P+SI  FK+L   S  GC  L SF
Sbjct: 924  FKDSDMQELPI----IENPLELDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESF 979

Query: 465  PSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRG 524
            P                  ++E  +I   + +L L  SAI+E+PSSI+ L  L+ L+L  
Sbjct: 980  PE-----------------ILEDMEI---LEKLELDGSAIKEIPSSIQRLRGLQDLNLAY 1019

Query: 525  CKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
            C+ L  +  S C L SL TL +  C  L+  PE L +++ L+ ++     + +  S    
Sbjct: 1020 CRNLVNLPESICNLTSLKTLTITSCPELKKLPENLGRLQSLESLH-----VKDFDSMNCQ 1074

Query: 585  LPGLEVLF-VEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSH 642
            LP L VL  +   ++L +LPD I  L  L ++ L+    +  +P   AL + +  +D+  
Sbjct: 1075 LPSLSVLLEIFTTNQLRSLPDGISQLHKLGFLDLSHCKLLQHIP---ALPSSVTYVDAHQ 1131

Query: 643  CKGLE 647
            C  L+
Sbjct: 1132 CTSLK 1136



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 139/326 (42%), Gaps = 57/326 (17%)

Query: 462  RSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLD 521
            R  P   H   P+   + Y +    F +   +V  +Y   +   EV   I+C  D     
Sbjct: 862  RCLPGQRHGFSPIFRGY-YNILKKSFKEAEYRVRLIYSQDTQDAEVRRCIQCQQD----- 915

Query: 522  LRGCKRLKRISTSFCKLRSLVTLILLGCL---NLEHFPEILEKMEHLKRIYSDRTPITEL 578
               C+R                    GC    +++  P I   +E       D   +  L
Sbjct: 916  -GICRRG-------------------GCFKDSDMQELPIIENPLELDGLCLRDCENLKSL 955

Query: 579  PSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSL 638
            P+S      L+      CS+L++ P+ +  +E L  +    SAI ++PSS+     L+ L
Sbjct: 956  PTSICEFKFLKTFSCSGCSQLESFPEILEDMEILEKLELDGSAIKEIPSSIQRLRGLQDL 1015

Query: 639  DSSHCKGLESFPRTFLLGLSAMGLLHISDY-AVREIPQEIAYLSSLEILYLSGNNFESLP 697
            + ++C+ L + P + +  L+++  L I+    ++++P+ +  L SLE L++   +F+S+ 
Sbjct: 1016 NLAYCRNLVNLPES-ICNLTSLKTLTITSCPELKKLPENLGRLQSLESLHVK--DFDSMN 1072

Query: 698  AIIKQMSQLRFIHLEDF--NMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTG 755
              +  +S L    LE F  N L+SLP+               +  L  L F    LDL+ 
Sbjct: 1073 CQLPSLSVL----LEIFTTNQLRSLPD--------------GISQLHKLGF----LDLSH 1110

Query: 756  CNMLRSLPELPLCLQYLNLEDCNMLR 781
            C +L+ +P LP  + Y++   C  L+
Sbjct: 1111 CKLLQHIPALPSSVTYVDAHQCTSLK 1136



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 179/454 (39%), Gaps = 95/454 (20%)

Query: 597  SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
            S +  LP     LE     L     +  LP+S+     L++   S C  LESFP      
Sbjct: 927  SDMQELPIIENPLELDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFP------ 980

Query: 657  LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM 716
                           EI +++  L  LE   L G+  + +P+ I+++  L+ ++L     
Sbjct: 981  ---------------EILEDMEILEKLE---LDGSAIKEIPSSIQRLRGLQDLNLAYCRN 1022

Query: 717  LQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE---LPLCLQYLN 773
            L +LPE            C +          L++L +T C  L+ LPE       L+ L+
Sbjct: 1023 LVNLPESI----------CNLTS--------LKTLTITSCPELKKLPENLGRLQSLESLH 1064

Query: 774  LEDCNMLR-SLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLE--KLSKHSPDLQ 830
            ++D + +   LP L + L++ T    N+L+SLP+ +  L +L    L   KL +H P   
Sbjct: 1065 VKDFDSMNCQLPSLSVLLEIFTT---NQLRSLPDGISQLHKLGFLDLSHCKLLQHIP--- 1118

Query: 831  WAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSEL 890
                +L S+    +   C  L  K ++ +L                  ++  I E +   
Sbjct: 1119 ----ALPSSVTYVDAHQCTSL--KISSSLLWSPF--------------FKSGIQEFVQRN 1158

Query: 891  RGSLIVLPGSEIPDWFSNQSSGSSICIQLPPH-SSCRNLIGFAFCAV---LDSKKVDSDC 946
            +  + +   + IP+W S+Q  GS I + LP +     + +GFA C++   LD +  D   
Sbjct: 1159 KVGIFLPESNGIPEWISHQKKGSKITLTLPQNWYENDDFLGFALCSLHVPLDIEWTDIKE 1218

Query: 947  FRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRV----ILGFKPCLNVGFPDG 1002
             R F     FD     +            RY E   D D      ++ +   +    P  
Sbjct: 1219 ARNFICKLNFDNSASFVVRNMQP-----QRYCESCRDGDESNQLWLINYPKSI---IPKR 1270

Query: 1003 YHHTI-----ATFKFFAERKFYKIKRCGLCPVYA 1031
            YH        A+F+ +      K++RCG   +YA
Sbjct: 1271 YHSNKYKTLNASFENYLGTISVKVERCGFQLLYA 1304



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 108/273 (39%), Gaps = 88/273 (32%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +TE+P  F ++P LE+L ++ C  L+ LP +I   ++L                      
Sbjct: 522 LTEIPD-FSSVPNLEILILKGCENLECLPRDIYKWKHL---------------------- 558

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFE 694
            ++L    C  L+ FP                     EI   +  L  L+   LSG   E
Sbjct: 559 -QTLSCGECSKLKRFP---------------------EIKGNMRKLRELD---LSGTAIE 593

Query: 695 SLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESL--- 751
            LP      S   F HL+              LK L    C  L  +P+   CL SL   
Sbjct: 594 ELP------SSSSFEHLK-------------ALKILSFNRCSKLNKIPIDVCCLSSLEVL 634

Query: 752 DLTGCNMLRSLPELPLC----LQYLNLEDCNMLRSLP----ELPLCLQLLTVRNCNRLQS 803
           DL+ CN++       +C    L+ LNL+  N  RS+P    +L   LQ+L + +C  L+ 
Sbjct: 635 DLSYCNIMEGGIPSDICRLSSLKELNLKS-NDFRSIPATINQLSR-LQVLNLSHCQNLEH 692

Query: 804 LPEILLCLQELDASVLEKLSKHSPDLQWAPESL 836
           +PE+   L+ LDA        H P+L  +  S 
Sbjct: 693 VPELPSSLRLLDA--------HGPNLTLSTASF 717


>gi|82542033|gb|ABB82024.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1078

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 243/750 (32%), Positives = 368/750 (49%), Gaps = 106/750 (14%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           ++D V+IVGI GM GIGKTTLAK +F+Q  + FEGSCF+S++  +S+   GL  LQKQ+L
Sbjct: 245 ATDDVRIVGIHGMPGIGKTTLAKVVFNQLCYRFEGSCFLSNINESSKQVNGLVPLQKQLL 304

Query: 63  STTLSEKLEVAGPNIPH----FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
                 K +VA  N         K+R+ R ++L+V DDV  + Q   L+GE   FG GSR
Sbjct: 305 HDI--SKQDVANINCVDRGKVMIKDRLCRKRVLVVADDVAHLEQQNALMGERSWFGPGSR 362

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRD  +L     E  + Y++  L+ +E+ + F   AFK++   +D    S+  V Y
Sbjct: 363 VIITTRDSNLLR----EADRTYQIEELKPDESLQLFSCHAFKDSKPAKDYIKLSKDAVDY 418

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSI 237
             G PL LEV+G+ L  K +  W  V+  L RI     HDI   L+ISF+ L    +++ 
Sbjct: 419 CGGLPLALEVMGACLSGKNRDGWKCVIEKLRRIPN---HDIQGRLRISFDALDGEELQNA 475

Query: 238 FLDIACFFEGEDKDFVASILD-----DSESDVLDILIDKSLVSISG-NFLNMHDILQEMG 291
           FLDIACFF    K++VA +L      + E D L  L  +SL+ +     + MHD+L++MG
Sbjct: 476 FLDIACFFIDRKKEYVAKVLGARCGYNPEVD-LQTLHGRSLIKVDAIGKITMHDLLRDMG 534

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R++VR+ S KEPGKR+R+W+ ++   VL+  KGTD +EG+ LD+   K  +L    F  M
Sbjct: 535 REVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDVRASKAKSLSAGLFAEM 594

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
             L L                      L  + V L      L K+L ++ W   PL+  P
Sbjct: 595 KCLNL----------------------LQINGVHLTGSFKLLSKELMWICWHRCPLKDFP 632

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
           S+F    L  L+++ S +++ W+G+K                       L+ F       
Sbjct: 633 SDFTADYLAVLDMQYSNLKELWKGKKI-------------------LNRLKIF------- 666

Query: 472 CPVTINFSYCVNLIEFPQI-SGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
                N S+  NL++ P + S  + +L L G S++ EV  SI   T L  L+L+GC  LK
Sbjct: 667 -----NLSHSRNLVKTPNLHSSSLEKLILKGCSSLVEVHQSIGHSTSLVFLNLKGCWSLK 721

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
            +  S   ++SL T+ + GC  LE  PE +  M+ L  + +D     +  SS   L  ++
Sbjct: 722 TLPESIRNVKSLETMKIYGCSQLEKLPEGMGDMKFLTELLADGIKTEQFLSSIGQLKYVK 781

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            L +  CS     P +   +     IL        LP+S     +++ L  S+C      
Sbjct: 782 RLSLRGCSP---TPPSCSLISAGVSILKC-----WLPTSFTEWRLVKHLMLSNCG----- 828

Query: 650 PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
                          +SD A   +  + + L SLE L LS N F SLP  I  + +L  +
Sbjct: 829 ---------------LSDRATNCV--DFSGLFSLEKLDLSENKFSSLPYGIGFLPKLSHL 871

Query: 710 HLEDFNMLQSLPELPLCLKYLHLIDCKMLQ 739
            ++    L S+P+LP  L  L    CK L+
Sbjct: 872 VVQTCEYLVSIPDLPSSLCLLDASSCKSLE 901



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 102/449 (22%), Positives = 183/449 (40%), Gaps = 62/449 (13%)

Query: 488 PQISGKVTRLYLGQSA--IEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
           P+  GK TR++  + A  + E     + +  L  LD+R  K     +  F +++ L  L+
Sbjct: 543 PKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGL-ALDVRASKAKSLSAGLFAEMKCL-NLL 600

Query: 546 LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
            +  ++L    ++L K   L  I   R P+ + PS F                       
Sbjct: 601 QINGVHLTGSFKLLSK--ELMWICWHRCPLKDFPSDF----------------------- 635

Query: 606 IGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHI 665
             + +YL  +    S + +L     + N L+  + SH + L   P      L  + L   
Sbjct: 636 --TADYLAVLDMQYSNLKELWKGKKILNRLKIFNLSHSRNLVKTPNLHSSSLEKLILKGC 693

Query: 666 SDYAVREIPQEIAYLSSLEILYLSGN-NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
           S  ++ E+ Q I + +SL  L L G  + ++LP  I+ +  L  + +   + L+ LPE  
Sbjct: 694 S--SLVEVHQSIGHSTSLVFLNLKGCWSLKTLPESIRNVKSLETMKIYGCSQLEKLPEGM 751

Query: 725 LCLKYLH--LIDC----KMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCN 778
             +K+L   L D     + L S+  L + ++ L L GC+   + P   L    +++  C 
Sbjct: 752 GDMKFLTELLADGIKTEQFLSSIGQLKY-VKRLSLRGCS--PTPPSCSLISAGVSILKCW 808

Query: 779 MLRSLPELPLCLQLLTVRNC---NRLQSLPEI--LLCLQELDASVLEKLSKHSPDLQWAP 833
           +  S  E  L   L+ + NC   +R  +  +   L  L++LD S   K S     + + P
Sbjct: 809 LPTSFTEWRLVKHLM-LSNCGLSDRATNCVDFSGLFSLEKLDLSE-NKFSSLPYGIGFLP 866

Query: 834 E-SLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRG 892
           + S      C    +   L   ++  +L  S  +    A+ +   GY +  + +  EL  
Sbjct: 867 KLSHLVVQTCEYLVSIPDL--PSSLCLLDASSCKSLERAMCNRGHGYRINFSLEHDELH- 923

Query: 893 SLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
                   E+PDW S +  G S+   +PP
Sbjct: 924 --------EMPDWMSYRGEGCSLSFHIPP 944


>gi|356560721|ref|XP_003548637.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1048

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 213/590 (36%), Positives = 313/590 (53%), Gaps = 62/590 (10%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG-GLEHLQKQ 60
           + S  V I+GIWGMGG GKTT+AKAI++Q    F    F+ ++R   ET G G  HLQ+Q
Sbjct: 208 NQSTKVCIIGIWGMGGSGKTTIAKAIYNQIHRRFMDKSFIENIREVCETDGRGHVHLQEQ 267

Query: 61  MLSTTLSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           +LS  L  K +V    +      +R+   +  IVLDDVNE GQLK L G    FGQGS I
Sbjct: 268 LLSDVLKTKEKVRSIGMGTTMIDKRLSGKRTFIVLDDVNEFGQLKNLCGNRKWFGQGSVI 327

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TTRD+R+L++ + +   +Y V+ ++  E+ E F   AF E    ED N  +R+VV+Y 
Sbjct: 328 IITTRDRRLLDQLKVD--YVYDVDKMDENESLELFSWHAFNEAKPKEDFNELARNVVAYC 385

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIF 238
            G PL LEVLGS L  +RK  W  VL  L RI   ++ +    L+ISF+ L+  + K IF
Sbjct: 386 GGLPLALEVLGSYLNERRKKDWESVLSKLERIPNDQVQEK---LRISFDGLSDHMEKDIF 442

Query: 239 LDIACFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSI-SGNFLNMHDILQEMGRQI 294
           LDI CFF G+D+ ++  IL      +D+ + +LID+SL+ +   N L MH +L++MGR+I
Sbjct: 443 LDICCFFIGKDRAYITEILKGCGLHADIGITVLIDRSLLKVEKNNKLGMHQLLRDMGREI 502

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           + + S KEPGKRSRLW  +++  VL +N GT AIEG+ L L        +  AF  M  L
Sbjct: 503 ICESSRKEPGKRSRLWFHEDVLDVLTNNTGTVAIEGLALKLHFAGRDCFNAYAFEEMKRL 562

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL                      L    VQL     YL K+LR++ W  +P + +P+NF
Sbjct: 563 RL----------------------LQLDHVQLTGDYGYLSKQLRWISWQGFPSKYIPNNF 600

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             + ++ ++L+ S +   W+          Q  K+L  L+    + L   P         
Sbjct: 601 YLEGVIAMDLKHSNLRLFWK--------EPQVLKWLKILNLSHSKYLTETP--------- 643

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
             NFS   NL +   I     RL        +V  SI  L +L +++L+ CK L  +   
Sbjct: 644 --NFSKLPNLEKL--ILKDCPRLC-------KVHKSIGDLCNLHLINLKDCKTLGNLPRG 692

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
             KL+S+ TLIL GC  ++   E + +ME L  + ++ T + ++P S  N
Sbjct: 693 VYKLKSVKTLILSGCSKIDKLEEDIVQMESLTTLIAENTALKQVPFSIVN 742



 Score = 40.8 bits (94), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 12/152 (7%)

Query: 556 PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
           P++L+ ++ L   +S    +TE P+ F  LP LE L ++DC +L  +  +IG L  L+ I
Sbjct: 622 PQVLKWLKILNLSHSKY--LTETPN-FSKLPNLEKLILKDCPRLCKVHKSIGDLCNLHLI 678

Query: 616 -LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP 674
            L     +  LP  V     +++L  S C  ++      ++ + ++  L   + A++++P
Sbjct: 679 NLKDCKTLGNLPRGVYKLKSVKTLILSGCSKIDKLEED-IVQMESLTTLIAENTALKQVP 737

Query: 675 QEIAYLSSLEILYLSGNNFES-----LPAIIK 701
             I  ++S  I Y+S   +E       P+II+
Sbjct: 738 FSI--VNSKSIGYISLCGYEGFARNVFPSIIR 767


>gi|356532660|ref|XP_003534889.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1036

 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 232/662 (35%), Positives = 351/662 (53%), Gaps = 68/662 (10%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPN-IP 78
           KTTL + +F++   E++GS F+++ R  S +  G+  L+K++ +  L   +++  PN +P
Sbjct: 216 KTTLPQEVFNKLQSEYQGSYFLANEREQS-SKDGIISLKKEIFTELLGHVVKIDTPNSLP 274

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
           + T   +RRMK+LIVLDDVN+   L++L+G LD FG GSRI++TTRD++VL   + +E  
Sbjct: 275 NDT---IRRMKVLIVLDDVNDSDHLEKLLGTLDHFGAGSRILITTRDEQVLNANKADE-- 329

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IYR+    F++AFE F   AF ++    + +  S+ VV+Y KG PLVL+VL   L  K K
Sbjct: 330 IYRLREFNFDKAFELFKLNAFNQSDNQSEYDELSQRVVNYAKGIPLVLKVLARLLRGKNK 389

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF-EGEDK---DFVA 254
             W   L  L ++    + ++ DI+K+S+  L  + + IFLD+ACFF   + K   D++ 
Sbjct: 390 EVWESELDKLEKM---PLREVCDIMKLSYVDLDRKEQQIFLDLACFFLRSQTKITIDYLN 446

Query: 255 SILDDSESD-----VLDILIDKSLVS-ISGNFLNMHDILQEMGRQIVRQESEKEPGKRSR 308
           S+L DSESD      L+ L DK+L++ +  NF+++HD LQEM  +IVRQES  +PG RSR
Sbjct: 447 SLLKDSESDNSVVVGLERLKDKALITFLENNFISIHDSLQEMACEIVRQESTGDPGSRSR 506

Query: 309 LWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYE-I 367
           LWD  +I   LK+ KG +AI  I L L   K  NL PR F  M+ LR  +  V   Y+ +
Sbjct: 507 LWDLDDIYEALKNYKGNEAIRSILLHLPTTKKENLSPRLFAKMNRLRFLEVSVEDNYDCL 566

Query: 368 EKLPSMSTEEQLSYSKVQ-------LPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
           ++L  + T   L + K Q       L  GL +L  +LR+L W +Y  ++LP  F  + LV
Sbjct: 567 DQLHILGT--NLCWPKQQKTRIVDILAKGLKFLATELRFLSWKSYSGKSLPEIFSTEKLV 624

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP-----SNLHFV---- 471
            L L  S +E+ W G        ++N   L  L  +  + L+  P     +NL  +    
Sbjct: 625 ILKLPYSGMEKLWLG--------VKNLVNLKELDLRCSKKLKELPDISKATNLEVILLRG 676

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
           C +  N    +     P    K+ RL L       + +S   L  L  LDL  CK LK+ 
Sbjct: 677 CSMLTNVHPSI--FSLP----KLERLNLSDCESLNILTSNSHLRSLSYLDLDFCKNLKKF 730

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
           S     ++ L     LGC  ++  P        LK ++   + I  LPSSF NL  L  L
Sbjct: 731 SVVSKNMKEL----RLGCTKVKALPSSFGHQSKLKLLHLKGSAIKRLPSSFNNLTQLLHL 786

Query: 592 FVEDCSKLDN---LPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
            + +CSKL+    LP  + +L   Y      + +  LP    L  +L++L+   CK L+S
Sbjct: 787 ELSNCSKLETIEELPPFLETLNAQY-----CTCLQTLPE---LPKLLKTLNVKECKSLQS 838

Query: 649 FP 650
            P
Sbjct: 839 LP 840



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 214/511 (41%), Gaps = 112/511 (21%)

Query: 487  FPQI--SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
             P+I  + K+  L L  S +E++   ++ L +L+ LDLR  K+LK +     K  +L  +
Sbjct: 614  LPEIFSTEKLVILKLPYSGMEKLWLGVKNLVNLKELDLRCSKKLKELP-DISKATNLEVI 672

Query: 545  ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
            +L GC                       + +T +  S  +LP LE L + DC  L+ L  
Sbjct: 673  LLRGC-----------------------SMLTNVHPSIFSLPKLERLNLSDCESLNILTS 709

Query: 605  NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLH 664
            N                 S L S       L  LD   CK L+ F     +    M  L 
Sbjct: 710  N-----------------SHLRS-------LSYLDLDFCKNLKKFS----VVSKNMKELR 741

Query: 665  ISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
            +    V+ +P    + S L++L+L G+  + LP+    ++QL  +HLE            
Sbjct: 742  LGCTKVKALPSSFGHQSKLKLLHLKGSAIKRLPSSFNNLTQL--LHLE------------ 787

Query: 725  LCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLP 784
                   L +C  L+++  LP  LE+L+   C  L++LPELP  L+ LN+++C  L+SLP
Sbjct: 788  -------LSNCSKLETIEELPPFLETLNAQYCTCLQTLPELPKLLKTLNVKECKSLQSLP 840

Query: 785  ELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFE 844
            EL   L++L  R+C   +SL  +L                  P    A E LK       
Sbjct: 841  ELSPSLEILNARDC---ESLMTVLF-----------------PST--AVEQLKENRKQVM 878

Query: 845  FTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPD 904
            F NCL L+  +   I  ++ + +   A   L       + E  ++    + + PGS +P 
Sbjct: 879  FWNCLNLDEHSLVAIGLNAQINMMKFANHHLSTPNREHV-ENYNDSFQVVYMYPGSSVPG 937

Query: 905  WFSNQSSGSSICIQL--PPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDL-EIK 961
            W   ++    I I L   P S  R    F FC VL   +  +D  R    S   +  E K
Sbjct: 938  WLEYKTRNYHITIDLSSAPPSPQR---SFVFCFVLGEFQ-RTDIIRTLEFSITMNEGEGK 993

Query: 962  TLSETKHVD-LGYNSRYIEDLIDSDRVILGF 991
              S + ++D LG++S      I+SD V + +
Sbjct: 994  EDSVSMYIDYLGWSS------IESDHVCVMY 1018


>gi|297794745|ref|XP_002865257.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311092|gb|EFH41516.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1838

 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 260/866 (30%), Positives = 393/866 (45%), Gaps = 171/866 (19%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ VGIWGM GIGKTTLAKA FDQ S +F+ SCF+ D        G    L KQ L    
Sbjct: 164 IRCVGIWGMPGIGKTTLAKAFFDQKSGKFDASCFIEDFDKVIHEKGLYRLLGKQFLKEKP 223

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
            + +     ++  +   +++  ++L+VLDDV      +  +G  D FG  S I++T+RDK
Sbjct: 224 PDGVTTTKLSMLRY---KLKNKRVLVVLDDVCNPLAAESFLGGFDWFGPESLIIITSRDK 280

Query: 127 RVLEKFR-GEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
           +V   FR  +  +IY V GL  +E+ +    + F+ +    +L   S  V+ Y  G+PL 
Sbjct: 281 QV---FRLCQVDQIYEVQGLNEKESLKLISLYVFRNDKEERNLPELSMKVIKYASGHPLA 337

Query: 186 LEVLGSSLCLKR------------------------KSHWGKVLHDLN----RICESEIH 217
           L + G  L  K+                        KS + K L ++     R+      
Sbjct: 338 LNIYGRELKGKKNLSEMETALLRLKQRPPVQIFDAFKSSYEKKLSEMETALLRLKPRLPF 397

Query: 218 DIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLV 274
            I+D  K S++ L    K+IFLDIACFF GE+ D+V  +L+  +      +D+L+DK LV
Sbjct: 398 QIFDAFKSSYDTLNDSEKNIFLDIACFFRGENVDYVMQLLEGCDFFPHVGVDVLVDKGLV 457

Query: 275 SISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP---------KEISRVLKHNKGT 325
           + S N L MH+++Q++G++I+  E+     +R RLW+P          E  R LK  +GT
Sbjct: 458 TFSENILQMHNLIQDVGQEIINGET-IYIERRRRLWEPWSIKYLLEDNEHKRTLKRAQGT 516

Query: 326 DAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV--PKFYEIEKLPSMSTEEQLSYSK 383
           + +EGIFLD + I   ++ P AF NM NLRL K +   P+   +   P  S         
Sbjct: 517 EDVEGIFLDTTDI-SFDIKPAAFDNMLNLRLLKIFCSNPEINHVINFPKGS--------- 566

Query: 384 VQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA----- 438
                 L  LP +LR LHWD YPL++LP  F P++LVE+N+  S++++ W G K      
Sbjct: 567 ------LHSLPNELRLLHWDNYPLQSLPQKFDPRHLVEINMPYSQLQKLWGGTKNLEMLR 620

Query: 439 ----CVPSSIQNFKYLS------ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP 488
               C    + +   LS       +  +GC  L+SFP     +    +N S C+ +   P
Sbjct: 621 TIRLCHSQELVDVDDLSKAQNLEVIDLQGCTRLQSFPDTCQLLHLRVVNLSGCLEIKSVP 680

Query: 489 QISGKVTRLYLGQSAIEEVP------------SSIECLTDLEVLDLRGCKRLKRISTSFC 536
                +  L L  + I ++P            S  + L+D   L L   K L+  S S  
Sbjct: 681 DFPPNIVTLRLKGTGIIKLPIAKRNGGELVSLSEFQGLSD--DLKLERLKSLQESSLSCQ 738

Query: 537 KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
            L  L+ L L  C  L   P +                         NL  L+VL +  C
Sbjct: 739 DLGKLICLDLKDCFLLRSLPNM------------------------ANLELLKVLDLSGC 774

Query: 597 SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSN----------------MLRSLDS 640
           S+L+ +     +L+ LY +  A   ++QLP S+ L N                +L+ LD 
Sbjct: 775 SRLNTIQSFPRNLKELYLVGTAVRQVAQLPQSLELLNAHGSRLRSLPNMANLELLKVLDL 834

Query: 641 SHCKGL---ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLP 697
           S C  L   +SFPR        +  L+++  AVR++PQ      SLE +   G+   SL 
Sbjct: 835 SGCSRLATIQSFPRN-------LKELYLAGTAVRQVPQ---LPQSLEFMNAHGSRLRSL- 883

Query: 698 AIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCN 757
                M+ L                    LK L L  C  L ++  LP  L+ LD+ G +
Sbjct: 884 ---SNMANLEL------------------LKVLDLSGCSRLDTIKGLPRNLKELDIAGTS 922

Query: 758 MLRSLPELPLCLQYLNLEDCNMLRSL 783
           + R LP+LP  L+ LN   C  L S+
Sbjct: 923 V-RGLPQLPQSLELLNSHGCVSLTSI 947



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 127/290 (43%), Gaps = 53/290 (18%)

Query: 370  LPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKV 429
            LP    +    +  V + +   +  KK R LHWD +P+R +PSNF  ++LV+L +  SK+
Sbjct: 1290 LPGSLKDLARDFENVSVASTQTWRSKKSRLLHWDAFPMRCMPSNFHGESLVDLIMEASKL 1349

Query: 430  EQPWEGEK---------------------------------------ACVPSSIQNFKYL 450
            E  W G K                                         +PSSI +   L
Sbjct: 1350 ETLWSGLKLLNSLKVMSLRCSLDLREIPDLSLATNLERLDLGHCSSLKMLPSSIGHLHKL 1409

Query: 451  SALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSS 510
              L  + C  L + P+ ++      +N + C  L  FPQIS  ++ LYL  +AIEEVP+ 
Sbjct: 1410 KDLDMEFCTYLEALPTGINLKSLYYLNLNGCSQLRSFPQISTNISDLYLDGTAIEEVPTW 1469

Query: 511  IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL--EHFPEILEKMEHLKRI 568
            IE ++ L  L + GCK+LK+IS +  KL+ L  +    C  L  + +P       H   I
Sbjct: 1470 IENISSLSYLSMNGCKKLKKISPNISKLKLLAEVDFSECTALTEDSWP------NHPGGI 1523

Query: 569  YSDRTPITELPSSFENLPGLEV------LFVEDCSKLDNLPDNIGSLEYL 612
            ++    +    +SF++LP          L   +C  L +LP+   SL  L
Sbjct: 1524 FTSIMRVDMSGNSFKSLPDTWTSIQPKDLIFNNCRNLASLPELPASLSML 1573



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 143/360 (39%), Gaps = 92/360 (25%)

Query: 588  LEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
            LE L +  CS L  LP +IG L  L  + +   + +  LP+ + L + L  L+ + C  L
Sbjct: 1385 LERLDLGHCSSLKMLPSSIGHLHKLKDLDMEFCTYLEALPTGINLKS-LYYLNLNGCSQL 1443

Query: 647  ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
             SFP+      + +  L++   A+ E+P  I  +SSL   YLS N  + L  I   +S+L
Sbjct: 1444 RSFPQIS----TNISDLYLDGTAIEEVPTWIENISSLS--YLSMNGCKKLKKISPNISKL 1497

Query: 707  RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP----FCLESLDLTGCNMLRSL 762
            + +   DF+   +L E                 S P  P      +  +D++G N  +SL
Sbjct: 1498 KLLAEVDFSECTALTE----------------DSWPNHPGGIFTSIMRVDMSG-NSFKSL 1540

Query: 763  PELPLCLQYLNL--EDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLE 820
            P+    +Q  +L   +C  L SLPELP  L +L   NC  L++L                
Sbjct: 1541 PDTWTSIQPKDLIFNNCRNLASLPELPASLSMLMANNCGSLENL---------------- 1584

Query: 821  KLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYE 880
                          S     +  +F NC  LN +A   IL                    
Sbjct: 1585 ------------NGSFDYPQMALQFINCFSLNHQARELILQSDC---------------- 1616

Query: 881  MAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSK 940
                        +  +LPG E+P  F++++ GS + I L      +    F  C V++S+
Sbjct: 1617 ------------AYAILPGGELPAHFTHRAYGSVLTIYL-----FKKFPTFKACIVVESR 1659


>gi|356560031|ref|XP_003548299.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1091

 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 251/769 (32%), Positives = 359/769 (46%), Gaps = 118/769 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V I+GI GMGG+GKTTLA A+++  +  F+ SCF+ +VR  S    GL+HLQ  
Sbjct: 204 VGSHDVVHIIGIHGMGGLGKTTLALAVYNLIALHFDESCFLQNVREES-NKHGLKHLQSI 262

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +LS  L EK       +     I H    R++R K+L++LDDV++  QLK ++G  D FG
Sbjct: 263 LLSKLLGEKDITLTSWQEGASMIQH----RLQRKKVLLILDDVDKREQLKAIVGRPDWFG 318

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK +L+    E ++ Y V  L    A +     AFK              
Sbjct: 319 PGSRVIITTRDKHLLKYH--EVERTYEVKVLNQSAALQLLKWNAFKREKIDPSYEDVLNR 376

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV+Y  G PL LEV+GS+L  K  + W   +    RI   EI    +ILK+SF+ L    
Sbjct: 377 VVTYASGLPLALEVIGSNLFGKTVAEWESAMEHYKRIPSDEI---LEILKVSFDALGEEQ 433

Query: 235 KSIFLDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSIS---GNFLNMHDIL 287
           K++FLDIAC F G    E  D + ++  + +   + +L++KSL+ ++    + + MHD++
Sbjct: 434 KNVFLDIACCFRGYKWTEVDDILRALYGNCKKHHIGVLVEKSLIKLNCYGTDTVEMHDLI 493

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS---KIKGINLD 344
           Q+M R+I R+ S +EPGK  RLW PK+I +V K N GT  IE I LD S   K + +  +
Sbjct: 494 QDMAREIERKRSPQEPGKCKRLWLPKDIIQVFKDNTGTSKIEIICLDSSISDKEETVEWN 553

Query: 345 PRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT 404
             AF  M NL++      KF                        G +Y P+ LR L W  
Sbjct: 554 ENAFMKMENLKILIIRNDKF----------------------SKGPNYFPEGLRVLEWHR 591

Query: 405 YPLRTLPSNFKPKNLVELNLRCSKVEQ-PWEGEKACVPSSIQNFKYLSALSFKGCQSLRS 463
           YP   LPSNF P NLV   L  S +    + G     PS  + F +L+ L F  C+ L  
Sbjct: 592 YPSNCLPSNFHPNNLVICKLPDSCMTSFEFHG-----PS--KKFGHLTVLKFDNCKFLTQ 644

Query: 464 FPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLR 523
            P          ++F  C +L+                     V  SI  L  L+ L   
Sbjct: 645 IPDVSDLPNLRELSFEECESLV--------------------AVDDSIGFLNKLKKLSAY 684

Query: 524 GCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE 583
           GC +LK        L SL TL L  C +LE+FPEI+ +ME++K ++    PI EL  SF+
Sbjct: 685 GCSKLKSFPP--LNLTSLQTLELSQCSSLEYFPEIIGEMENIKHLFLYGLPIKELSFSFQ 742

Query: 584 NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
           NL GL  L +  C                         I +LP S+A+   L      +C
Sbjct: 743 NLIGLRWLTLRSC------------------------GIVKLPCSLAMMPELFEFHMEYC 778

Query: 644 ------------KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN 691
                       K + S P +     SA       D+ +          + +  L LSGN
Sbjct: 779 NRWQWVESEEGEKKVGSIPSSKAHRFSAKDCNLCDDFFLTGFKT----FARVGHLNLSGN 834

Query: 692 NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           NF  LP   K++  LR + + D   LQ +  LP  L+Y    +C  L S
Sbjct: 835 NFTILPEFFKELQLLRSLMVSDCEHLQEIRGLPPNLEYFDARNCASLTS 883



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 105/463 (22%), Positives = 186/463 (40%), Gaps = 83/463 (17%)

Query: 488 PQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC-----KRLKRISTSFCKLRSLV 542
           PQ  GK  RL+L +  I+    +    + +E++ L        + ++    +F K+ +L 
Sbjct: 506 PQEPGKCKRLWLPKDIIQVFKDNTGT-SKIEIICLDSSISDKEETVEWNENAFMKMENLK 564

Query: 543 TLILLG---CLNLEHFPEILEKMEHLK--------RIYSDRTPITELP----SSFE---- 583
            LI+          +FPE L  +E  +          + +   I +LP    +SFE    
Sbjct: 565 ILIIRNDKFSKGPNYFPEGLRVLEWHRYPSNCLPSNFHPNNLVICKLPDSCMTSFEFHGP 624

Query: 584 --NLPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
                 L VL  ++C  L  +PD  ++ +L  L +      ++  +  S+   N L+ L 
Sbjct: 625 SKKFGHLTVLKFDNCKFLTQIPDVSDLPNLRELSF--EECESLVAVDDSIGFLNKLKKLS 682

Query: 640 SSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAI 699
           +  C  L+SFP   L  L  + L   S  ++   P+ I  + +++ L+L G   + L   
Sbjct: 683 AYGCSKLKSFPPLNLTSLQTLELSQCS--SLEYFPEIIGEMENIKHLFLYGLPIKELSFS 740

Query: 700 IKQMSQLRFIHLEDFNMLQ---SLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGC 756
            + +  LR++ L    +++   SL  +P   ++ H+  C   Q        +ES +  G 
Sbjct: 741 FQNLIGLRWLTLRSCGIVKLPCSLAMMPELFEF-HMEYCNRWQ-------WVESEE--GE 790

Query: 757 NMLRSLPELPLCLQYLNLEDCNM-----LRSLPELPLCLQLLTVRNCNRLQSLPEILLCL 811
             + S+P         + +DCN+     L           L    + N    LPE    L
Sbjct: 791 KKVGSIPSSKA--HRFSAKDCNLCDDFFLTGFKTFARVGHLNL--SGNNFTILPEFFKEL 846

Query: 812 QELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMA 871
           Q L  S++    +H  +++  P +L+     F+  NC  L   + N              
Sbjct: 847 QLL-RSLMVSDCEHLQEIRGLPPNLEY----FDARNCASLTSSSKN-------------- 887

Query: 872 IASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSS 914
                    M +N+KL E  G+  +  G+ IP+WF  QSSG S
Sbjct: 888 ---------MLLNQKLHEAGGTNFMFTGTSIPEWFDQQSSGPS 921



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 148/364 (40%), Gaps = 36/364 (9%)

Query: 549 CLNLEHFPEILEKMEHLKRIYSDRTP-ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
           C+    F    +K  HL  +  D    +T++P    +LP L  L  E+C  L  + D+IG
Sbjct: 615 CMTSFEFHGPSKKFGHLTVLKFDNCKFLTQIPD-VSDLPNLRELSFEECESLVAVDDSIG 673

Query: 608 SLEYLYYILAAASAISQLPSSVALS-NMLRSLDSSHCKGLESFPRTFLLG-LSAMGLLHI 665
            L  L  +  +A   S+L S   L+   L++L+ S C  LE FP   ++G +  +  L +
Sbjct: 674 FLNKLKKL--SAYGCSKLKSFPPLNLTSLQTLELSQCSSLEYFPE--IIGEMENIKHLFL 729

Query: 666 SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ------- 718
               ++E+      L  L  L L       LP  +  M +L   H+E  N  Q       
Sbjct: 730 YGLPIKELSFSFQNLIGLRWLTLRSCGIVKLPCSLAMMPELFEFHMEYCNRWQWVESEEG 789

Query: 719 --SLPELPLCLKY-LHLIDCKMLQSLPVLPFC----LESLDLTGCNMLRSLPELPLCLQY 771
              +  +P    +     DC +     +  F     +  L+L+G N    LPE    LQ 
Sbjct: 790 EKKVGSIPSSKAHRFSAKDCNLCDDFFLTGFKTFARVGHLNLSG-NNFTILPEFFKELQL 848

Query: 772 LN---LEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL-DASVLEKLSKHSP 827
           L    + DC  L+ +  LP  L+    RNC  L S  + +L  Q+L +A     +   + 
Sbjct: 849 LRSLMVSDCEHLQEIRGLPPNLEYFDARNCASLTSSSKNMLLNQKLHEAGGTNFMFTGTS 908

Query: 828 DLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKL 887
             +W  +     +  F F N      K   K+L    L I  ++   + L  ++ IN K 
Sbjct: 909 IPEWFDQQSSGPSSSFWFRN------KFPAKLLC---LLIAPVSTGIVVLNPKVFINGKF 959

Query: 888 SELR 891
            E+R
Sbjct: 960 QEIR 963


>gi|359493220|ref|XP_002264441.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1481

 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 213/618 (34%), Positives = 328/618 (53%), Gaps = 35/618 (5%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
           KTT+A+AI+++ S++++GS F+ +VR  S+  G    LQ ++L   L  K      NI  
Sbjct: 230 KTTIAQAIYNEISYQYDGSSFLRNVRERSK--GDTLQLQNELLHGILKGK-GFKISNIDE 286

Query: 79  --HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
             +  K  +   ++L++ DDV+E+ QL+ L  E D F   S I++T+RDK+VL ++  + 
Sbjct: 287 GVNMIKRCLNSKRVLVIFDDVDELTQLEYLADEKDWFKVKSTIIITSRDKQVLAQYGVDT 346

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
              Y V+    +EA E F  +AFKEN         S +++ Y  G PL L++LG+SL  K
Sbjct: 347 P--YEVHKFNEKEAIELFSLWAFKENLPKGAYKNLSYNMIEYADGLPLALKLLGASLFGK 404

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
           + S W   L+ L RI   EI+ +   L+ISF+ L    K IFLD+ACFF+G+DKDFV+ I
Sbjct: 405 KISEWESALYKLKRIPHMEINKV---LRISFDGLDDMDKEIFLDVACFFKGKDKDFVSRI 461

Query: 257 LDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
           L       +  L DK L++IS N ++MHD++Q+MGR+I+RQE  ++ G+RSR+WD  +  
Sbjct: 462 LGPHAEYGIATLNDKCLITISKNMIDMHDLIQQMGREIIRQECPEDLGRRSRIWD-SDAY 520

Query: 317 RVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTE 376
            VL  N GT AI+ +FL++ K         +F  M  LRL K +    Y+   +      
Sbjct: 521 NVLTRNMGTRAIKALFLNICKFNPTQFTEESFKQMDGLRLLKIHKDDDYDRISIFRSYPH 580

Query: 377 EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE 436
            +L +S+  LP   ++   +L Y HWD Y L +LP+NF  K+L  L LR S ++Q W G 
Sbjct: 581 GKL-FSEDHLPRDFEFPSYELTYFHWDGYSLESLPTNFHAKDLAALILRGSNIKQLWRGN 639

Query: 437 KACVPSSIQNFKY---------------LSALSFKGCQSLRSFPSNLH-FVCPVTINFSY 480
           K      + N  +               L  L  KGC++L   P +++ +    T++   
Sbjct: 640 KLHNKLKVINLSFSVHLTEIPDFSSVPNLEILILKGCENLECLPRDIYKWKHLQTLSCGE 699

Query: 481 CVNLIEFPQISG---KVTRLYLGQSAIEEVP--SSIECLTDLEVLDLRGCKRLKRISTSF 535
           C  L  FP+I G   K+  L L  +AIEE+P  SS E L  L++L    C +L +I    
Sbjct: 700 CSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSKLNKIPIDV 759

Query: 536 CKLRSLVTLILLGCLNLE-HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
           C L SL  L L  C  +E   P  + ++  LK +         +P++   L  L+VL + 
Sbjct: 760 CCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRLQVLNLS 819

Query: 595 DCSKLDNLPDNIGSLEYL 612
            C  L+++P+   SL  L
Sbjct: 820 HCQNLEHVPELPSSLRLL 837



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 5/149 (3%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S ++E+P  IE   +L+ L LR C+ LK + TS C+ + L T    GC  LE FPEILE 
Sbjct: 1097 SDMQELPI-IENPLELDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFPEILED 1155

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAAS 620
            ME L+++  D + I E+PSS + L GL+ L +  C  L NLP++I +L  L  + + +  
Sbjct: 1156 MEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTITSCP 1215

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESF 649
             + +LP ++     L+SL+S H K  +S 
Sbjct: 1216 ELKKLPENLG---RLQSLESLHVKDFDSM 1241



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 39/224 (17%)

Query: 414  FKPKNLVELNLRCSKVEQPWEGEKACV---------PSSIQNFKYLSALSFKGCQSLRSF 464
            FK  ++ EL +    +E P E +  C+         P+SI  FK+L   S  GC  L SF
Sbjct: 1094 FKDSDMQELPI----IENPLELDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESF 1149

Query: 465  PSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRG 524
            P                  ++E  +I   + +L L  SAI+E+PSSI+ L  L+ L+L  
Sbjct: 1150 PE-----------------ILEDMEI---LEKLELDGSAIKEIPSSIQRLRGLQDLNLAY 1189

Query: 525  CKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
            C+ L  +  S C L SL TL +  C  L+  PE L +++ L+ ++     + +  S    
Sbjct: 1190 CRNLVNLPESICNLTSLKTLTITSCPELKKLPENLGRLQSLESLH-----VKDFDSMNCQ 1244

Query: 585  LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSS 628
            LP L   FV+       LP++ G  E++ +    +     LP +
Sbjct: 1245 LPSLSE-FVQRNKVGIFLPESNGIPEWISHQKKGSKITLTLPQN 1287



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 132/319 (41%), Gaps = 62/319 (19%)

Query: 759  LRSLP--ELPLCLQYLNLEDCNMLRSLPELPLC----LQLLTVRNCNRLQSLPEILLCLQ 812
            ++ LP  E PL L  L L DC  L+SLP   +C    L+  +   C++L+S PEIL    
Sbjct: 1099 MQELPIIENPLELDGLCLRDCENLKSLP-TSICEFKFLKTFSCSGCSQLESFPEILE--- 1154

Query: 813  ELDASVLEKLSKHSPDLQWAPESLK--------SAAICFEFTN------------CLKLN 852
              D  +LEKL      ++  P S++        + A C    N             L + 
Sbjct: 1155 --DMEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTIT 1212

Query: 853  GKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSEL-----RGSL-IVLPGSE-IPDW 905
                 K L ++L R++  ++ SL +    ++N +L  L     R  + I LP S  IP+W
Sbjct: 1213 SCPELKKLPENLGRLQ--SLESLHVKDFDSMNCQLPSLSEFVQRNKVGIFLPESNGIPEW 1270

Query: 906  FSNQSSGSSICIQLPPH-SSCRNLIGFAFCAV---LDSKKVDSDCFRYFYVSFQFDLEIK 961
             S+Q  GS I + LP +     + +GFA C++   LD +  D    R F     FD    
Sbjct: 1271 ISHQKKGSKITLTLPQNWYENDDFLGFALCSLHVPLDIEWTDIKEARNFICKLNFDNSAS 1330

Query: 962  TLSETKHVDLGYNSRYIEDLIDSDRV----ILGFKPCLNVGFPDGYHHTI-----ATFKF 1012
             +            RY E   D D      ++ +   +    P  YH        A+F+ 
Sbjct: 1331 FVVRNMQP-----QRYCESCRDGDESNQLWLINYPKSI---IPKRYHSNKYKTLNASFEN 1382

Query: 1013 FAERKFYKIKRCGLCPVYA 1031
            +      K++RCG   +YA
Sbjct: 1383 YLGTISVKVERCGFQLLYA 1401



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 148/377 (39%), Gaps = 121/377 (32%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +TE+P  F ++P LE+L ++ C  L+ LP +I   ++L                      
Sbjct: 656 LTEIPD-FSSVPNLEILILKGCENLECLPRDIYKWKHL---------------------- 692

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFE 694
            ++L    C  L+ FP                     EI   +  L  L+   LSG   E
Sbjct: 693 -QTLSCGECSKLKRFP---------------------EIKGNMRKLRELD---LSGTAIE 727

Query: 695 SLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESL--- 751
            LP      S   F HL+              LK L    C  L  +P+   CL SL   
Sbjct: 728 ELP------SSSSFEHLK-------------ALKILSFNRCSKLNKIPIDVCCLSSLEVL 768

Query: 752 DLTGCNMLRSLPELPLC----LQYLNLEDCNMLRSLP----ELPLCLQLLTVRNCNRLQS 803
           DL+ CN++       +C    L+ LNL+  N  RS+P    +L   LQ+L + +C  L+ 
Sbjct: 769 DLSYCNIMEGGIPSDICRLSSLKELNLKS-NDFRSIPATINQLSR-LQVLNLSHCQNLEH 826

Query: 804 LPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC--FEFTNCLKLNGKANNKILA 861
           +PE+   L+ LDA        H P+L     +L +A+        NC             
Sbjct: 827 VPELPSSLRLLDA--------HGPNL-----TLSTASFLPFHSLVNCFN----------- 862

Query: 862 DSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLP-GSEIPDWFSNQSSGSSICIQLP 920
               +I+ ++ +S         ++     +G  IVLP  S +P+W  +Q S +    +LP
Sbjct: 863 ---SKIQDLSWSSC------YYSDSTYRGKGICIVLPRSSGVPEWIMDQRSET----ELP 909

Query: 921 PHSSCRN-LIGFAFCAV 936
            +    N  +GFA C V
Sbjct: 910 QNCYQNNEFLGFAICCV 926



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 33/249 (13%)

Query: 462  RSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLD 521
            R  P   H   P+   + Y +    F +   +V  +Y   +   EV   I+C  D     
Sbjct: 1032 RCLPGQRHGFSPIFRGY-YNILKKSFKEAEYRVRLIYSQDTQDAEVRRCIQCQQD----- 1085

Query: 522  LRGCKRLKRISTSFCKLRSLVTLILLGCL---NLEHFPEILEKMEHLKRIYSDRTPITEL 578
               C+R                    GC    +++  P I   +E       D   +  L
Sbjct: 1086 -GICRRG-------------------GCFKDSDMQELPIIENPLELDGLCLRDCENLKSL 1125

Query: 579  PSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSL 638
            P+S      L+      CS+L++ P+ +  +E L  +    SAI ++PSS+     L+ L
Sbjct: 1126 PTSICEFKFLKTFSCSGCSQLESFPEILEDMEILEKLELDGSAIKEIPSSIQRLRGLQDL 1185

Query: 639  DSSHCKGLESFPRTFLLGLSAMGLLHISDY-AVREIPQEIAYLSSLEILYLSGNNFESLP 697
            + ++C+ L + P + +  L+++  L I+    ++++P+ +  L SLE L++   +F+S+ 
Sbjct: 1186 NLAYCRNLVNLPES-ICNLTSLKTLTITSCPELKKLPENLGRLQSLESLHVK--DFDSMN 1242

Query: 698  AIIKQMSQL 706
              +  +S+ 
Sbjct: 1243 CQLPSLSEF 1251


>gi|27764544|gb|AAO23074.1| R 10 protein [Glycine max]
          Length = 901

 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 248/768 (32%), Positives = 356/768 (46%), Gaps = 117/768 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V I+GI GMGG+GKTTLA A+++  +  F+ SCF+ +VR  S    GL+HLQ  
Sbjct: 204 VGSHDVVHIIGIHGMGGLGKTTLALAVYNLIALHFDESCFLQNVREES-NKHGLKHLQSI 262

Query: 61  MLSTTLSEK--LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS  L EK     +        + R++R K+L++LDDV++  QLK ++G  D FG GSR
Sbjct: 263 LLSKLLGEKDITLTSWQEGASMIQHRLQRKKVLLILDDVDKREQLKAIVGRPDWFGPGSR 322

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRDK +L+    E ++ Y V  L    A +     AFK              VV+Y
Sbjct: 323 VIITTRDKHLLKYH--EVERTYEVKVLNQSAALQLLKWNAFKREKIDPSYEDVLNRVVTY 380

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+GS+L  K  + W   +    RI   EI    +ILK+SF+ L    K++F
Sbjct: 381 ASGLPLALEVIGSNLFGKTVAEWESAMEHYKRIPSDEI---LEILKVSFDALGEEQKNVF 437

Query: 239 LDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSIS---GNFLNMHDILQEMG 291
           LDIAC F G    E  D + ++  + +   + +L++KSL+ ++    + + MHD++Q+M 
Sbjct: 438 LDIACCFRGYKWTEVDDILRALYGNCKKHHIGVLVEKSLIKLNCYGTDTVEMHDLIQDMA 497

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS---KIKGINLDPRAF 348
           R+I R+ S +EPGK  RLW PK+I +V K N GT  IE I LD S   K + +  +  AF
Sbjct: 498 REIERKRSPQEPGKCKRLWLPKDIIQVFKDNTGTSKIEIICLDSSISDKEETVEWNENAF 557

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M NL++      KF                        G +Y P+ LR L W  YP  
Sbjct: 558 MKMENLKILIIRNDKF----------------------SKGPNYFPEGLRVLEWHRYPSN 595

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPS----SIQNFKYLSALSFKGCQSLRSF 464
            LPSNF P NLV   L             +C+ S        F +L+ L F  C+ L   
Sbjct: 596 CLPSNFHPNNLVICKL-----------PDSCMTSFEFHGPSKFGHLTVLKFDNCKFLTQI 644

Query: 465 PSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRG 524
           P          ++F  C +L+                     V  SI  L  L+ L   G
Sbjct: 645 PDVSDLPNLRELSFEECESLV--------------------AVDDSIGFLNKLKKLSAYG 684

Query: 525 CKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
           C +LK  S     L SL TL L  C +LE+FPEI+ +ME++K ++    PI EL  SF+N
Sbjct: 685 CSKLK--SFPPLNLTSLQTLELSQCSSLEYFPEIIGEMENIKHLFLYGLPIKELSFSFQN 742

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC- 643
           L GL  L +  C                         I +LP S+A+   L      +C 
Sbjct: 743 LIGLRWLTLRSC------------------------GIVKLPCSLAMMPELFEFHMEYCN 778

Query: 644 -----------KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNN 692
                      K + S P +     SA       D+ +          + +  L LSGNN
Sbjct: 779 RWQWVESEEGEKKVGSIPSSKAHRFSAKDCNLCDDFFLTGFKT----FARVGHLNLSGNN 834

Query: 693 FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           F  LP   K++  LR + + D   LQ +  LP  L+Y    +C  L S
Sbjct: 835 FTILPEFFKELQLLRSLMVSDCEHLQEIRGLPPNLEYFDARNCASLTS 882



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 113/267 (42%), Gaps = 25/267 (9%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALS-N 633
           +T++P    +LP L  L  E+C  L  + D+IG L  L  +  +A   S+L S   L+  
Sbjct: 641 LTQIPD-VSDLPNLRELSFEECESLVAVDDSIGFLNKLKKL--SAYGCSKLKSFPPLNLT 697

Query: 634 MLRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNN 692
            L++L+ S C  LE FP   ++G +  +  L +    ++E+      L  L  L L    
Sbjct: 698 SLQTLELSQCSSLEYFPE--IIGEMENIKHLFLYGLPIKELSFSFQNLIGLRWLTLRSCG 755

Query: 693 FESLPAIIKQMSQLRFIHLEDFNMLQ---------SLPELPLCLKY-LHLIDCKMLQSLP 742
              LP  +  M +L   H+E  N  Q          +  +P    +     DC +     
Sbjct: 756 IVKLPCSLAMMPELFEFHMEYCNRWQWVESEEGEKKVGSIPSSKAHRFSAKDCNLCDDFF 815

Query: 743 VLPFC----LESLDLTGCNMLRSLPELPLCLQYLN---LEDCNMLRSLPELPLCLQLLTV 795
           +  F     +  L+L+G N    LPE    LQ L    + DC  L+ +  LP  L+    
Sbjct: 816 LTGFKTFARVGHLNLSG-NNFTILPEFFKELQLLRSLMVSDCEHLQEIRGLPPNLEYFDA 874

Query: 796 RNCNRLQSLPEILLCLQELDASVLEKL 822
           RNC  L S  + +L  Q L   +L ++
Sbjct: 875 RNCASLTSSSKNMLLNQVLSFLLLYRI 901


>gi|224122448|ref|XP_002318839.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222859512|gb|EEE97059.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 937

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 244/751 (32%), Positives = 372/751 (49%), Gaps = 99/751 (13%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            ++ V+ VGI+GM GIGKT +AKA+F+Q  H+FEGSCF+ ++R +S+   GL  LQ+Q+L
Sbjct: 198 GTNEVRTVGIYGMPGIGKTAIAKAVFNQLCHKFEGSCFLLNIRKSSDQHNGLVQLQEQLL 257

Query: 63  STTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             +L+ K+  A  +   +  K +  R ++L++LDD ++  Q+  L+GE   FG GSRIV+
Sbjct: 258 FDSLTGKIWFADVDAGINGIKSQFCRKRVLVILDDFDQSEQIHALVGERGWFGPGSRIVI 317

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRD+ +L +   E  K Y    L  EE+ + F   AF+E H   +    S+ +V Y  G
Sbjct: 318 TTRDEHLLTQL--EVVKKYPAKELNHEESLQLFSWHAFREPHPVTEYVELSKVLVDYVGG 375

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS-IFLD 240
            PL LEV+GS L  +    W   +  L +I     H I   LK SF+ L       +FLD
Sbjct: 376 VPLALEVVGSYLFRRSIPQWTSAIEKLKKIPH---HQIQRQLKTSFDDLDGDKLKDMFLD 432

Query: 241 IACFFEGEDKDFVASILDDS----ESDVLDILIDKSLVSI-SGNFLNMHDILQEMGRQIV 295
           IACFF G DKD+V  ILD      E D+ +IL ++SL+++ S N L MH++L++MGR+I+
Sbjct: 433 IACFFIGMDKDYVGKILDGRGFYPEIDI-NILRERSLLTVNSENKLQMHNLLRDMGREII 491

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           RQ  +  PGKRSRLW  +++  VL    GT+ +EGI LD    K   L   +F   ++  
Sbjct: 492 RQ-MDPNPGKRSRLWLHEDVMEVLGKCSGTEVVEGIMLDAQASKDAFLSTTSFAPTTSQA 550

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
                V           M++ + L +S  QL    +++ + L +L W    +RTLP  F+
Sbjct: 551 SKDVVV----STTSFARMTSLQLLQFSGGQLRGHCEHVSEALIWLCWHKCSMRTLPHKFQ 606

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
             +LV L+++ S++ + W+ E  C    + N K L                         
Sbjct: 607 LDSLVVLDMQHSEIRELWK-ETKC----LNNLKVL------------------------- 636

Query: 476 INFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF 535
            + S+ +  ++ P  SG                     L  LE L L  CKRL  I  S 
Sbjct: 637 -DLSHSMFFVKTPNFSG---------------------LPSLETLILENCKRLADIHQSI 674

Query: 536 CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
            +L+ LV L L GC +L++ PE                    LPS+      LE L    
Sbjct: 675 GELKKLVFLNLKGCSSLKNLPE-------------------SLPST------LETLNTTG 709

Query: 596 CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
           C  L+  P+N+G+++ L  + A  + +  LPSS+     L+ L     K     P +F  
Sbjct: 710 CISLEKFPENLGNMQGLIEVQANETEVHHLPSSIGNLKKLKKLFIV-LKQQPFLPLSFS- 767

Query: 656 GLSAMGLLHISDYAVREIPQEI--AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLED 713
           GLS++  LH+S+  +      I    LSSL+ L L+ N+F  LPA I  + +L  + L  
Sbjct: 768 GLSSLTTLHVSNRHLSNSNTSINLGSLSSLQDLKLASNDFSELPAGIGHLPKLEKLDLSA 827

Query: 714 FNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
              L  + E+P  L+ L  +DC  L+ +  L
Sbjct: 828 CRNLLFISEIPSSLRTLVALDCISLEKIQGL 858



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 136/319 (42%), Gaps = 53/319 (16%)

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
           L +  S I E+    +CL +L+VLDL       + + +F  L SL TLIL  C  L    
Sbjct: 613 LDMQHSEIRELWKETKCLNNLKVLDLSHSMFFVK-TPNFSGLPSLETLILENCKRLADIH 671

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPG-LEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
           + + +++ L  ++ +    + L +  E+LP  LE L    C  L+  P+N+G+++ L  +
Sbjct: 672 QSIGELKKL--VFLNLKGCSSLKNLPESLPSTLETLNTTGCISLEKFPENLGNMQGLIEV 729

Query: 616 LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
            A  + +  LPSS+     L+ L     K     P +F  GLS++  LH+S+  +     
Sbjct: 730 QANETEVHHLPSSIGNLKKLKKLFIV-LKQQPFLPLSFS-GLSSLTTLHVSNRHLSNSNT 787

Query: 676 EI--AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI 733
            I    LSSL+ L L+ N+F  LPA I  + +L                           
Sbjct: 788 SINLGSLSSLQDLKLASNDFSELPAGIGHLPKL--------------------------- 820

Query: 734 DCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLL 793
                          E LDL+ C  L  + E+P  L+ L   DC  L  +  L       
Sbjct: 821 ---------------EKLDLSACRNLLFISEIPSSLRTLVALDCISLEKIQGLESVENKP 865

Query: 794 TVR--NCNRL-QSLPEILL 809
            +R  NCN L  +  EILL
Sbjct: 866 VIRMENCNNLSNNFKEILL 884


>gi|15230522|ref|NP_190724.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6572077|emb|CAB63020.1| disease resistance-like protein [Arabidopsis thaliana]
 gi|332645285|gb|AEE78806.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1253

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 299/1001 (29%), Positives = 451/1001 (45%), Gaps = 152/1001 (15%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V+ +GIWGM GIGKTTLAKA FDQ S ++E SCF+ D    +    GL  L +      L
Sbjct: 180  VRSIGIWGMPGIGKTTLAKAAFDQLSGDYEASCFIKDF-NKAFHEKGLYGLLEAHFGKIL 238

Query: 67   SEKLEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
             E+L +      P   +  +R  ++L+VLDDV +    +  +G  D F  GS I++T+RD
Sbjct: 239  REELGIKSSITRPILLRNVLRHKRVLVVLDDVCKPLDAESFLGGFDWFCPGSLIIITSRD 298

Query: 126  KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
            K+V    R ++  IY V GL  EEA + F   AF +    E L   S+ V+ Y  GNPL 
Sbjct: 299  KQVFSICRVDQ--IYEVPGLNEEEALQLFSRCAFGKEIIHESLQKLSKKVIDYANGNPLA 356

Query: 186  LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF 245
            L   G   C+ RK+    +     ++ +   H+I+D +K +++ L+   K+IFLDIAC F
Sbjct: 357  LIFFG---CMSRKNP-KPIEIAFPKVKKYLAHEIHDAVKSTYDSLSSNEKNIFLDIACLF 412

Query: 246  EGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKE 302
             GE+ D V  +L+         +++L++K LVS++   + MH+++Q +GR+I+       
Sbjct: 413  RGENVDCVIHLLEGCGFFPRVEINVLVEKCLVSMAEGRVVMHNLIQSIGRKIINGGK--- 469

Query: 303  PGKRSRLWDPKEISRVLKHNK--GTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
              +RSRLW P  I   L+  +  G++ IE IFLD S +   +++P AF NM NLR  K  
Sbjct: 470  --RRSRLWKPLIIKYFLEDRQVLGSEDIEAIFLDPSAL-SFDVNPMAFENMYNLRYLK-- 524

Query: 361  VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                        + +    ++  + LP G+  LP++LR LHW+ +PL +LP +F  +NLV
Sbjct: 525  ------------ICSSNPGNHYALHLPKGVKSLPEELRLLHWEHFPLLSLPQDFNTRNLV 572

Query: 421  ELNLRCSKVEQPWEGEKA---------CVPSSIQNFKYLS------ALSFKGCQSLRSFP 465
             LN+  SK+++ WEG K          C    +   + L        +  +GC  L+ F 
Sbjct: 573  ILNMCYSKLQRLWEGTKELGMLKRIMLCHSQQLVGIQELQIALNMEVIDLQGCARLQRFL 632

Query: 466  SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLE-VLDLRG 524
            +  HF     IN S C+ +  FP++   +  LYL Q+ I  +P+      D   + D + 
Sbjct: 633  ATGHFQHLRVINLSGCIKIKSFPEVPPNIEELYLKQTGIRSIPTVTFSPQDNSFIYDHKD 692

Query: 525  CKRLKRISTS-------FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
             K L R  +S          L +L  L L  CL LE    I    ++L+++Y   T I E
Sbjct: 693  HKFLNREVSSDSQSLSIMVYLDNLKVLDLSQCLELEDIQGI---PKNLRKLYLGGTAIKE 749

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY---------------------IL 616
            LP S  +L  L VL +E+C +L  LP  IG+L  L                       + 
Sbjct: 750  LP-SLMHLSELVVLDLENCKRLHKLPMGIGNLSSLAVLNLSGCSELEDIQGIPRNLEELY 808

Query: 617  AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAVREIP 674
             A +AI ++ S +   + L  LD  +CK L+  P     L  L  + L   S  ++RE+ 
Sbjct: 809  LAGTAIQEVTSLIKHLSELVVLDLQNCKRLQHLPMEISNLKSLVTLKLTDPSGMSIREVS 868

Query: 675  QEIAY-------LSSLEILYLSGN-----NFESLPAIIKQMSQLRFIHLEDFNMLQSLPE 722
              I         +S+L  L L+ N       E LP      S L  + +  F  L SL  
Sbjct: 869  TSIIQNGISEIGISNLNYLLLTFNENAEQRREYLPRPRLPSSSLHGL-VPRFYALVSLSL 927

Query: 723  LPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLN---LEDCNM 779
                L ++    C    SLP +      LDL G N    +PE    L  L+   L  C  
Sbjct: 928  FNASLMHIPEEIC----SLPSVVL----LDL-GRNGFSKIPESIKQLSKLHSLRLRHCRN 978

Query: 780  LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSA 839
            L  LP LP  L+LL V  C  L+S                         + W  E   S 
Sbjct: 979  LILLPALPQSLKLLNVHGCVSLES-------------------------VSWGFEQFPSH 1013

Query: 840  AICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSL---IV 896
               + F++C   + K   K +   L ++  +             NE   EL  +L   I 
Sbjct: 1014 ---YTFSDCFNKSPKVARKRVVKGLAKVASIG------------NEHQQELIKALAFSIC 1058

Query: 897  LPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
             P         N  +GS   I++ P S  + L+GFA   V+
Sbjct: 1059 GPAGADQATSYNLRAGSFATIEITP-SLRKTLLGFAIFVVV 1098


>gi|357469163|ref|XP_003604866.1| NBS resistance protein-like protein [Medicago truncatula]
 gi|355505921|gb|AES87063.1| NBS resistance protein-like protein [Medicago truncatula]
          Length = 1791

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 213/595 (35%), Positives = 322/595 (54%), Gaps = 74/595 (12%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML- 62
            S+ V ++GIWGMGG GKTT+AKAI++Q  ++FEG  F+ ++R   ET   L  LQ+Q+L 
Sbjct: 721  SEDVSLLGIWGMGGTGKTTIAKAIYNQIGNKFEGRSFLLNIREFWETNINLVSLQQQLLC 780

Query: 63   ----STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
                +TT   +   +G N     KER+ + ++LIVLDDVNE+ QLK L G  + FG GSR
Sbjct: 781  DVYKTTTFKIRDIESGKNT---LKERLSQNRVLIVLDDVNELDQLKALCGSREWFGPGSR 837

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            I++TTRD  +L   R +E  +Y +  +   E+ E F   AF +    +D   HS  V++Y
Sbjct: 838  IIITTRDMHLLRSCRVDE--VYTIEEMGDSESLELFSWHAFNQPSPTKDFATHSTDVIAY 895

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSI 237
            +   PL L+VLGS L     S W K+L  L  I   ++      LK+SF+ L     K I
Sbjct: 896  SGRLPLALQVLGSYLSDCEISEWQKMLEKLKCIPHDQVQKK---LKVSFDGLKDVTEKQI 952

Query: 238  FLDIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSISG-NFLNMHDILQEMGRQ 293
            FLDIACFF G D++    IL+ S   +D+ + +L+++SLV++   N L MHD+L++MGRQ
Sbjct: 953  FLDIACFFIGMDRNDAIQILNGSGFFADIGIKVLVERSLVTVDNRNKLRMHDLLRDMGRQ 1012

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
            IV +ES  +P  RSRLW  +E+  ++  +KGT+A++G+ L+  +   ++L+ +AF  M+ 
Sbjct: 1013 IVYEESPFDPETRSRLWRREEVFDIISKHKGTEAVKGLALEFPRKNTVSLNTKAFKKMNK 1072

Query: 354  LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
            LRL                      L  S VQL     YL  +LR+L+W  +P    P+ 
Sbjct: 1073 LRL----------------------LQLSGVQLNGDFKYLSGELRWLYWHGFPSTYTPAE 1110

Query: 414  FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
            F+  +LV + L+ S ++Q W+  +      ++N K L                       
Sbjct: 1111 FQQGSLVSIELKYSSLKQIWKKSQL-----LENLKIL----------------------- 1142

Query: 474  VTINFSYCVNLIEFPQIS--GKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
               N S+  +LIE P  S    + +L L     +  V  SI  L  L +++L  C  L++
Sbjct: 1143 ---NLSHSWDLIETPDFSFMPNLEKLVLKDCPRLTAVSRSIGSLHKLLLINLTDCTSLQK 1199

Query: 531  ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL 585
            +  S  KL+SL TLIL GC  ++   E LE+ME LK + +D+T IT++P S   L
Sbjct: 1200 LPRSIYKLKSLETLILSGCSKIDKLEEDLEQMESLKTLIADKTAITKVPFSIVRL 1254



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 174/308 (56%), Gaps = 22/308 (7%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH------LQKQML 62
           ++GIWGM GIGK+T+A+AI++Q    FE    + DVR   +  GGL        LQ+++L
Sbjct: 221 LIGIWGMAGIGKSTIAEAIYNQIGPYFEHKYLLDDVREVWKRDGGLVSFDGPVSLQEKLL 280

Query: 63  S-----TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           S     T +      +G NI    KE++   ++L+VLD+V+++ QLK L G  D FG GS
Sbjct: 281 SYRGIPTEIKIGTIESGKNI---LKEKLHNKRVLLVLDNVDKLEQLKSLCGNRDWFGPGS 337

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVV 176
           +I++TTRD+ +L++ R +   IY+V  L+  E+ E F   AF +     E     SR +V
Sbjct: 338 KIIITTRDRHLLKEHRVDH--IYKVKELDESESIELFNWAAFNQATTSREGFGELSRQLV 395

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           +Y++G PL L+ LG  L  K    W +VL  L      +  +I  +L+ SF  L+   K 
Sbjct: 396 AYSRGLPLALKALGGFLHGKEVLEWKRVLRSLETFSFPD-QEILQVLETSFADLSGEEKH 454

Query: 237 IFLDIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSIS-GNFLNMHDILQEMGR 292
           IFLDIACFF   D++ V   L+ S    + ++ +L DKSLV+I   N L MH +LQ M R
Sbjct: 455 IFLDIACFFNRMDQNDVLHTLNRSTQCSALLISLLEDKSLVTIDENNKLEMHGLLQAMAR 514

Query: 293 QIVRQESE 300
            I+++  +
Sbjct: 515 DIIKKTDQ 522


>gi|357462269|ref|XP_003601416.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
 gi|355490464|gb|AES71667.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
          Length = 1743

 Score =  310 bits (794), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 261/748 (34%), Positives = 368/748 (49%), Gaps = 107/748 (14%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNS-ETAGGLEHLQKQMLSTTLSEKLEVAGPNIP 78
           KTTL  A+F +   +F+ SCF+++VR  S E    L+ LQ ++LS      L + G  I 
Sbjct: 221 KTTLTTALFKKIKSQFDVSCFIANVREVSGERNQYLQQLQNKILS-----HLNIKGMVIE 275

Query: 79  HFT--KERVRRM----KLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEK- 131
             +  K+ +R +    K+L+VLDDV+   QL+ L G  + FG+GSRI+VTTRDK +L   
Sbjct: 276 TLSQGKDSLRNLLSNKKVLLVLDDVSSKSQLENLAGSQEWFGRGSRIIVTTRDKHLLISH 335

Query: 132 ---FRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEV 188
              F   E KI     L   E+   FC  AFKE+   E     S SVV Y +G PL LEV
Sbjct: 336 DVLFEMYESKI-----LNKSESLHLFCEKAFKEDAPKEGFVELSESVVEYARGLPLALEV 390

Query: 189 LGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGE 248
           LGS LC +  S W   L  + ++      DI + L+IS++ L    K+IFLDIACFF+G 
Sbjct: 391 LGSFLCGRSLSDWEDALIKIKQVPHD---DILNKLRISYDMLEDEHKTIFLDIACFFKGW 447

Query: 249 DKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGK 305
            K  V  IL+      +  +++LI+KSL++  G  + +HD+L+EM + IV QES  +PG+
Sbjct: 448 YKHKVIQILESCGLHPTVGINVLIEKSLLTFDGRVIWLHDMLEEMAKTIVIQESPNDPGR 507

Query: 306 RSRLWDPKEISRVLKHNKGTDAIEGIFLDL--SKIKGINLDPRAFTNMSNLRLFKFYVPK 363
           RSRLW  ++I +VLK NKGT+ ++GI L    S +   + DP AFT M NLRL       
Sbjct: 508 RSRLWSLEDIDQVLKKNKGTEIVQGIVLKSSPSTLYEAHWDPEAFTKMGNLRLL------ 561

Query: 364 FYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELN 423
                          +    + L  GL  L   L+ L W  YPL +LP   +   LV L 
Sbjct: 562 ---------------IILCDLHLSLGLKCLSSSLKVLVWWGYPLNSLPVGIQLDELVHLQ 606

Query: 424 LRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVN 483
           +  SK++Q W G         + +  L  +     + LR  P+         + F+ C+ 
Sbjct: 607 MINSKIKQLWNGN--------EYYGKLKVIDLSNSKDLRQTPNVSGIPNLEELYFNDCIK 658

Query: 484 LIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVT 543
           L+E  Q                    SI     L +L L GC  LK I     ++ SL  
Sbjct: 659 LVEVHQ--------------------SIRQHKKLRILSLMGCVDLK-IFPKKLEMFSLKM 697

Query: 544 LILLGCLNLEHFPEILEKMEHLK-RIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNL 602
           L L  C N++  P+  + M  +      +   +  LP+S  NL  L +L +  CSK+ NL
Sbjct: 698 LFLSYCSNIKRLPDFGKNMTCITELNLLNCENLLSLPNSICNLKSLRILNISGCSKICNL 757

Query: 603 PDNIGSLEYLYYILAAASAISQL-PSSVALSNMLR---------SLDSS------HCKGL 646
           PD I  +  L  I  + +AI  L PS + L N+ R         + +SS        K  
Sbjct: 758 PDGINQIMALEDIDLSRTAIRDLDPSLLQLGNLKRLSLRSCRDPATNSSWNFHLPFGKKF 817

Query: 647 ESFPRT--------FLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESL 696
             FP          FL GLS++  L +SD  + +  IP +I  LSSLE L LSGNNF  L
Sbjct: 818 SFFPAQTTSLTLPPFLSGLSSLTELDLSDCNLTDSSIPHDIDCLSSLERLILSGNNFVCL 877

Query: 697 PA-IIKQMSQLRFIHLEDFNMLQSLPEL 723
           P   I  +S+LR++ LED   LQSLP L
Sbjct: 878 PTHYISNLSKLRYLELEDCPQLQSLPML 905



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 65/169 (38%), Gaps = 31/169 (18%)

Query: 323  KGTDAIEGIFLDLS--KIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLS 380
            +GT+ ++GI L  S   +   + DP AF+ M NLRL                      + 
Sbjct: 1587 EGTELVQGIVLKSSPSTLYEAHWDPEAFSKMGNLRLL---------------------II 1625

Query: 381  YSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACV 440
               + L  GL  L   L+   W  YPL +LP   +   LV L +  SKV+Q W G K   
Sbjct: 1626 LCDLHLSLGLKCLSSSLKVPVWWGYPLNSLPVGVQLDELVNLQMINSKVKQLWNGNKY-- 1683

Query: 441  PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
                  +  L  +     + LR  P+         +  + C  L+E  Q
Sbjct: 1684 ------YGKLKVIDLSNSKDLRQTPNVSGIPNLEELYLNDCTKLVEVHQ 1726


>gi|359473398|ref|XP_002268324.2| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
           vinifera]
          Length = 1378

 Score =  310 bits (793), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 245/803 (30%), Positives = 384/803 (47%), Gaps = 77/803 (9%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN--SETAGGLEHLQKQM 61
           S+  +++G  GMGG+GKTTLAKA++++    FE   F+S+V+     +    L  L  ++
Sbjct: 208 SNCTRVLGFHGMGGVGKTTLAKALYNKLVAHFECRSFISNVKETLAQQDEDSLLSLHNKL 267

Query: 62  LST-TLSEKLEVAGPNIPHFTKERVRRMK-LLIVLDDVNEVGQLKRLIGELDQ---FGQG 116
           ++  ++SE   V+  N       R+   K +L+V+DDV++  QL+ +IG       F  G
Sbjct: 268 INDLSMSEASPVSEVNAGLVAIRRIMHEKRVLLVMDDVDDASQLEVVIGRRKWRQFFYGG 327

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++TTRD+ VL      E +++ V GL F E+ + F   A +     ED    S  +V
Sbjct: 328 SRIIITTRDRGVLRDL--HENELFEVQGLNFSESLQLFSYHALRREKPTEDFWNLSNEIV 385

Query: 177 SYTKGNPLVLEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           S T G PL LEV GS L  KR    W   L  L +I  S   ++ D+LKISF+ L  + K
Sbjct: 386 SLTGGLPLALEVFGSFLYDKRIIKEWEDALQKLKQIRPS---NLQDVLKISFDGLDEQEK 442

Query: 236 SIFLDIACFF-----EGEDKDFVASILDDSESDVLDILIDKSLV-SISGNFLNMHDILQE 289
            IFLDIACFF     + ED   +           + +L +KSL+ +     L MHD L++
Sbjct: 443 DIFLDIACFFVKMRLKREDAIDILKGCGFRADITIKVLTEKSLIKTYEDGILWMHDQLRD 502

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGI-------N 342
           MG+QIV+ E+  +PG RSRLWD  E+  VL+   GT +I+GI  +  K           +
Sbjct: 503 MGKQIVQHENPSDPGSRSRLWDHNEVMSVLQDQTGTRSIQGIVPEFKKKDASPESSSQNS 562

Query: 343 LDPRAFTNMSNLRLFKFYVPKFYE-----------IEKLPSMSTEEQLSYSKVQLPNGLD 391
           L  +     + L L K    +F+             +    M T   L  + VQL     
Sbjct: 563 LQTKHKFTRAILPLKKTIKERFHPKADKERVMLLCTKSFQPMVTLRLLQINHVQLGGNFK 622

Query: 392 YLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLS 451
            +P +L++L W   PL+TLPS F P+ L  L+L  SK+E+ W      V  +      L 
Sbjct: 623 NIPSELKWLQWKGCPLKTLPSTFCPRKLTVLDLSESKIERVWGCHNKKVAEN------LM 676

Query: 452 ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL----YLGQSAIEEV 507
            ++  GC SL   P          +    C++L+   +  G +  L     +G S + E 
Sbjct: 677 VMNLSGCNSLTDLPDVSGHQTLEKLILERCLSLVTIHKSVGDLRTLLHLNLMGCSNLLEF 736

Query: 508 PSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI---------------------- 545
           PS +  L  LE+ +L GC +LK +      + SL  L+                      
Sbjct: 737 PSDVSGLRHLEIFNLSGCTKLKELPEDMSSMTSLRELLVDKTAIVNLPDSIFRLKKLEKF 796

Query: 546 -LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
            L  C +L+  P+ + ++  L+ +  + + + ELP S  +L  LE L +  C  L  +PD
Sbjct: 797 SLDSCSSLKQLPDCIGRLSSLRELSLNGSGLEELPDSIGSLTNLERLSLMRCRLLSAIPD 856

Query: 605 NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLH 664
           ++G L  L  +    S+I +LP+S+   + LR L  SHC+ L   P + + GL ++    
Sbjct: 857 SVGRLRSLIELFICNSSIKELPASIGSLSQLRYLSLSHCRSLIKLPDS-IEGLVSLARFQ 915

Query: 665 ISDYAVREIPQEIAYLSSLEILYLSGNN-FESLPAIIKQMSQLRFIHLEDFNMLQSLPEL 723
           +    +  +P ++  L+ LE L +     F S P  I  MS L  + L D +++  LPE 
Sbjct: 916 LDGTLLTGVPDQVGSLNMLETLEMRNCEIFSSFPE-INNMSSLTTLIL-DNSLITELPES 973

Query: 724 PLCLKYLHLI---DCKMLQSLPV 743
              L+ L+++   +CK LQ LP 
Sbjct: 974 IGKLERLNMLMLNNCKQLQRLPA 996



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 211/460 (45%), Gaps = 44/460 (9%)

Query: 345  PRAFTNMSNLRLFKFY-VPKFYEI-EKLPSMSTEEQLSYSK---VQLPNGLDYLPKKLRY 399
            P   + + +L +F      K  E+ E + SM++  +L   K   V LP+ +  L KKL  
Sbjct: 737  PSDVSGLRHLEIFNLSGCTKLKELPEDMSSMTSLRELLVDKTAIVNLPDSIFRL-KKLEK 795

Query: 400  LHWDT-YPLRTLPSNF-KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKG 457
               D+   L+ LP    +  +L EL+L  S +E+        +P SI +   L  LS   
Sbjct: 796  FSLDSCSSLKQLPDCIGRLSSLRELSLNGSGLEE--------LPDSIGSLTNLERLSLMR 847

Query: 458  CQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL-YLGQS---AIEEVPSSIEC 513
            C+ L + P ++  +  +   F    ++ E P   G +++L YL  S   ++ ++P SIE 
Sbjct: 848  CRLLSAIPDSVGRLRSLIELFICNSSIKELPASIGSLSQLRYLSLSHCRSLIKLPDSIEG 907

Query: 514  LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT 573
            L  L    L G   L  +      L  L TL +  C     FPEI   M  L  +  D +
Sbjct: 908  LVSLARFQLDGT-LLTGVPDQVGSLNMLETLEMRNCEIFSSFPEI-NNMSSLTTLILDNS 965

Query: 574  PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSN 633
             ITELP S   L  L +L + +C +L  LP +I  L+ L  +L   +A+++LP +  + +
Sbjct: 966  LITELPESIGKLERLNMLMLNNCKQLQRLPASIRKLKNLCSLLMTRTAVTELPENFGMLS 1025

Query: 634  MLRSLDSSHCKGLESF----------------PRTFLLGLSAMGLLHISDYAVREIPQEI 677
             LR+L  +     E+                 P   L+  S + +L   D    +I   I
Sbjct: 1026 NLRTLKMAKHPDPEATGEHTELTNLILQENPKPVVLLMSFSNLFMLKELDARAWKISGSI 1085

Query: 678  A---YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID 734
            +    LSSLE L L  NNF SLP+ ++ +S L+ + L     + SLP LP  L  L++ +
Sbjct: 1086 SDFEKLSSLEDLNLGHNNFCSLPSSLQGLSVLKNLFLPHCKEINSLPPLPSSLIKLNVSN 1145

Query: 735  CKMLQSLPVLPF--CLESLDLTGCNMLRSLPELPLCLQYL 772
            C  LQS+  L     LE L+LT C  +  +P L  CL+ L
Sbjct: 1146 CCALQSVSDLSNLKSLEDLNLTNCKKIMDIPGLQ-CLKSL 1184


>gi|255564962|ref|XP_002523474.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223537302|gb|EEF38933.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1091

 Score =  310 bits (793), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 214/584 (36%), Positives = 306/584 (52%), Gaps = 68/584 (11%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLS-EKLEVAGPN-I 77
           KTT+A+AIF + S +F G CF+S+VR  S    GL HL++ M S  L  EKL +   + +
Sbjct: 226 KTTIAEAIFSRISDQFAGCCFLSNVREKSSKL-GLIHLKRDMYSKLLGDEKLSIEMSHAL 284

Query: 78  PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
           P F  +R+RR K+++ LDDVN+  QL+ L G    FG GSR++VT RDK VL+    +  
Sbjct: 285 PTFVVDRLRRKKVIVFLDDVNDSEQLEALAGNHVWFGPGSRVIVTGRDKEVLQ---CKVD 341

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           +IY+V GL   ++       AFKE   P D    S  VV+Y +G PL L+VLGS L  + 
Sbjct: 342 EIYKVEGLNHNDSLRLLSMKAFKEKQPPNDYAKLSEMVVNYAQGVPLALKVLGSHLYKRS 401

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
           +  W  +L+ L +  +S I     IL+IS+++L    K IFLDIACFF+G +KD +  IL
Sbjct: 402 QKEWETMLNKLKQFPDSNIQ---KILEISYDELDQMEKDIFLDIACFFKGCEKDKIEDIL 458

Query: 258 DD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           +     +E  +L  L +K LV+I  N L MHD++QEMG  I ++       K SRLW+ +
Sbjct: 459 EGCGFAAEWGILR-LTEKCLVTIQNNRLEMHDLIQEMGLHIAKR-------KGSRLWNSQ 510

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           +I  +L  + G   +EGIFLD+SK   I L+   F+ M  LRL KFY           S 
Sbjct: 511 DICHMLMTDMGKKKVEGIFLDMSKTGKIRLNHATFSRMPMLRLLKFY-------RTWSSP 563

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
            +++ +   K    N L+ L  +L  LHW+ YP ++L SNF  +NLVELN+  S +EQ W
Sbjct: 564 RSQDAVFIVKSAESNCLEGLSNRLSLLHWEEYPCKSLCSNFFMENLVELNMPRSNIEQLW 623

Query: 434 EGEK----------------------------------AC-----VPSSIQNFKYLSALS 454
              +                                   C     +PSS+Q  K L +L+
Sbjct: 624 NDNEGPPKLRRLDLSKSVNLKRLPDLSSTTNLTSIELWGCESLLEIPSSVQKCKKLYSLN 683

Query: 455 FKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECL 514
              C+ LRS PS +       ++ + C NL   P I   V  L L  S +EE PSS+  L
Sbjct: 684 LDNCKELRSLPSLIQLESLSILSLACCPNLKMLPDIPRGVKDLSLHDSGLEEWPSSVPSL 743

Query: 515 TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
            +L    +  CK L+ +  S  + +SL  + L GC NL+  PEI
Sbjct: 744 DNLTFFSVAFCKNLRSL-PSLLQWKSLRDIDLSGCSNLKVLPEI 786



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 166/351 (47%), Gaps = 58/351 (16%)

Query: 718  QSLPELPLCLK------YLHLIDCKMLQSLPVLPFCLESLD---LTGCNMLRSLPELPLC 768
            +SL E+P  ++       L+L +CK L+SLP L   LESL    L  C  L+ LP++P  
Sbjct: 664  ESLLEIPSSVQKCKKLYSLNLDNCKELRSLPSL-IQLESLSILSLACCPNLKMLPDIPRG 722

Query: 769  LQYLNLEDCNMLR---SLPELPLCLQLLTVRNCNRLQSLPEILL--CLQELDASVLEKLS 823
            ++ L+L D  +     S+P L   L   +V  C  L+SLP +L    L+++D S    L 
Sbjct: 723  VKDLSLHDSGLEEWPSSVPSLD-NLTFFSVAFCKNLRSLPSLLQWKSLRDIDLSGCSNLK 781

Query: 824  --KHSPDLQWAPESLKSAA--IC-FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLG 878
                 PDL W    L+ +    C F F NC+ L   A   I+A +  RI+ +A A  R  
Sbjct: 782  VLPEIPDLPWQVGILQGSRKDYCRFHFLNCVNLGWYARLNIMACAQQRIKEIASAKTRNY 841

Query: 879  YEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLD 938
            + +A              L GS+ P+WFS QS G SI I LP  S     +GFAFCAVL+
Sbjct: 842  FAVA--------------LAGSKTPEWFSYQSLGCSITISLPTCSFNTMFLGFAFCAVLE 887

Query: 939  SK-KVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNV 997
             +  +      +FY++ +   E    ++    DL +++  +E + +SD V L ++   N 
Sbjct: 888  FEFPLVISRNSHFYIACESRFE--NTNDDIRDDLSFSASSLETIPESDHVFLWYR--FNS 943

Query: 998  GFPDGYHHT------IATFKFFAERKF------------YKIKRCGLCPVY 1030
               + +          A+F+F A+ +F             K+KRCG+  +Y
Sbjct: 944  SDLNSWLIQNCCILRKASFEFKAQYRFLSNHHPSTEKWEVKVKRCGVHLIY 994



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 31/209 (14%)

Query: 562 MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASA 621
           ME+L  +   R+ I +L +  E  P L  L +     L  LPD   +       L    +
Sbjct: 606 MENLVELNMPRSNIEQLWNDNEGPPKLRRLDLSKSVNLKRLPDLSSTTNLTSIELWGCES 665

Query: 622 ISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD----YAVREIPQEI 677
           + ++PSSV     L SL+  +CK L S P   L+ L ++ +L ++       + +IP+ +
Sbjct: 666 LLEIPSSVQKCKKLYSLNLDNCKELRSLPS--LIQLESLSILSLACCPNLKMLPDIPRGV 723

Query: 678 AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM 737
             LS      L  +  E  P+ +  +  L F  +     L+SLP L   L++  L D   
Sbjct: 724 KDLS------LHDSGLEEWPSSVPSLDNLTFFSVAFCKNLRSLPSL---LQWKSLRD--- 771

Query: 738 LQSLPVLPFCLESLDLTGCNMLRSLPELP 766
                        +DL+GC+ L+ LPE+P
Sbjct: 772 -------------IDLSGCSNLKVLPEIP 787


>gi|357456967|ref|XP_003598764.1| Resistance protein [Medicago truncatula]
 gi|355487812|gb|AES69015.1| Resistance protein [Medicago truncatula]
          Length = 1185

 Score =  310 bits (793), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 225/615 (36%), Positives = 325/615 (52%), Gaps = 71/615 (11%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS++ V +VGI+G+GGIGK+T A+A+ +  + +FEG CF+ D+R   E    L  LQ+ 
Sbjct: 213 LDSNERVSMVGIYGIGGIGKSTTARAVHNLIADQFEGVCFLDDIR-KREINHDLARLQEA 271

Query: 61  MLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS  L EK    G      +  K R++R K+L++LD+V++V QL+  +G    FG GS+
Sbjct: 272 LLSDILGEKDIKVGDVYRGMSIIKRRLQRKKVLLILDNVDKVQQLQAFVGH-GWFGFGSK 330

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENH---CPEDLNWHSRSV 175
           ++VTTRDK +L        K+Y V  L+ E+A E F   AFK      C  D+   ++ +
Sbjct: 331 VIVTTRDKHLLATH--GIVKVYEVKQLKSEKALELFSWHAFKNKKIDPCYVDI---AKRL 385

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           V+Y  G PL LEV+GS L  K    W   L     +   +IH+I   LK+S++ L    K
Sbjct: 386 VTYCHGLPLALEVIGSHLFGKSLGVWKSSLVKYKGVLRKDIHEI---LKVSYDDLEEDEK 442

Query: 236 SIFLDIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNF-LNMHDILQEMG 291
            IFLDIACFF   +  +V  +L        D + +LIDKSL+ I  N  + MHD++Q MG
Sbjct: 443 GIFLDIACFFNSYEISYVKELLYLHGFHAEDGIQVLIDKSLMKIDINGCVRMHDLIQSMG 502

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IVRQES  EPG+RSRLW   +I +VL+ NKGTD +E I  +L K + +    +AF  M
Sbjct: 503 REIVRQESTLEPGRRSRLWFSDDIVQVLEENKGTDTVEVIIANLRKGRKVKWCGKAFGPM 562

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NL++                      L     Q  NG   LP  L+ L W  YP  +LP
Sbjct: 563 KNLKI----------------------LIVRNAQFSNGPQILPNSLKVLDWSGYPSSSLP 600

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
           S F PKNL  LNL  S ++  W         S++ F+ LS L F+GC+ L   PS     
Sbjct: 601 SKFNPKNLAILNLPESHLK--WF-------QSLKVFEMLSFLDFEGCKFLTKLPSLSRVP 651

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
               +   YC+NLI                     +  S+  L  L +   +GC RL+ +
Sbjct: 652 YLGALCLDYCINLI--------------------RIHDSVGFLGSLVLFSAQGCSRLESL 691

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
              +  L SL TL L GC  L++FPE+L  ME++K +Y D+T + +LP +  NL GL+ L
Sbjct: 692 -VPYINLPSLETLDLRGCSRLDNFPEVLGLMENIKDVYLDQTDLYQLPFTIGNLVGLQRL 750

Query: 592 FVEDCSKLDNLPDNI 606
           ++  C ++  LP  I
Sbjct: 751 YLRGCQRMIQLPSYI 765


>gi|358248980|ref|NP_001239717.1| TMV resistance protein N-like [Glycine max]
 gi|223452611|gb|ACM89632.1| candidate disease-resistance protein [Glycine max]
          Length = 1029

 Score =  309 bits (792), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 240/723 (33%), Positives = 339/723 (46%), Gaps = 122/723 (16%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V I+GI GMGG+GKTTLA A+++  +  F+ SCF+ +VR  S    GL+H Q  
Sbjct: 204 VGSDDLVHIIGIHGMGGLGKTTLALAVYNFIALHFDESCFLQNVREES-NKHGLKHFQSI 262

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +LS  L EK       +     I H    R+RR K+L++LDDV++  QL+ ++G  D FG
Sbjct: 263 LLSKLLGEKDITLTSWQEGASMIQH----RLRRKKVLLILDDVDKREQLEAIVGRSDWFG 318

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK +L+    E ++ Y V  L    A +     AFK        +     
Sbjct: 319 PGSRVIITTRDKHLLKYH--EVERTYEVKVLNHNAALQLLTWNAFKREKIDPIYDDVLNR 376

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV+Y  G PL LEV+GS L  K  + W   +    RI   EI     ILK+SF+ L    
Sbjct: 377 VVTYASGLPLALEVIGSDLFGKTVAEWESAVEHYKRIPSDEI---LKILKVSFDALGEEQ 433

Query: 235 KSIFLDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSIS---GNFLNMHDIL 287
           K++FLDIAC F+G    E  D + +   + +   + +L++KSL+ ++      + MHD++
Sbjct: 434 KNVFLDIACCFKGYKWTEVDDILRAFYGNCKKHHIGVLVEKSLIKLNCYDSGTVEMHDLI 493

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS---KIKGINLD 344
           Q+MGR+I RQ S +EP K  RLW PK+I +VLKHN GT  IE I LD S   K + +  +
Sbjct: 494 QDMGREIERQRSPEEPWKCKRLWSPKDIFQVLKHNTGTSKIEIICLDFSISDKEETVEWN 553

Query: 345 PRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT 404
             AF  M NL++      KF                        G +Y P+ L  L W  
Sbjct: 554 ENAFMKMENLKILIIRNGKF----------------------SKGPNYFPEGLTVLEWHR 591

Query: 405 YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSF 464
           YP   LP NF P NL    L C   +      +   PS  + F +L+ L+F  C+ L   
Sbjct: 592 YPSNCLPYNFHPNNL----LICKLPDSSITSFELHGPS--KKFWHLTVLNFDQCEFLTQI 645

Query: 465 PSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRG 524
           P          ++F +C +LI                     V  SI  L  L+ L   G
Sbjct: 646 PDVSDLPNLKELSFDWCESLI--------------------AVDDSIGFLNKLKKLSAYG 685

Query: 525 CKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
           C++L+        L SL TL L GC +LE+FPEIL +ME++K +  D  PI ELP SF+N
Sbjct: 686 CRKLRSFPP--LNLTSLETLQLSGCSSLEYFPEILGEMENIKALDLDGLPIKELPFSFQN 743

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
           L GL  L +  C                         I QLP S+A+   L      +C 
Sbjct: 744 LIGLCRLTLNSC------------------------GIIQLPCSLAMMPELSVFRIENC- 778

Query: 645 GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
                                + +   E  +     + +E L LSGNNF  LP   K++ 
Sbjct: 779 ---------------------NRWHWVESEEGSKRFTRVEYLDLSGNNFTILPEFFKELQ 817

Query: 705 QLR 707
            LR
Sbjct: 818 FLR 820



 Score = 51.2 bits (121), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 80/195 (41%), Gaps = 27/195 (13%)

Query: 727 LKYLHLIDCKMLQSLPVLPFC-LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPE 785
           LK L    C+ L+S P L    LE+L L+GC+ L   PE+   ++ +   D + L  + E
Sbjct: 678 LKKLSAYGCRKLRSFPPLNLTSLETLQLSGCSSLEYFPEILGEMENIKALDLDGL-PIKE 736

Query: 786 LPLCLQ------LLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSA 839
           LP   Q       LT+ +C  +Q LP  L  + EL    +E  ++      W      S 
Sbjct: 737 LPFSFQNLIGLCRLTLNSCGIIQ-LPCSLAMMPELSVFRIENCNR----WHWVESEEGSK 791

Query: 840 AICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPG 899
                FT    L+   NN  +     +      A +          KL E  G+  +  G
Sbjct: 792 ----RFTRVEYLDLSGNNFTILPEFFKELQFLRALM----------KLHEAGGTNFMFTG 837

Query: 900 SEIPDWFSNQSSGSS 914
           + IP+W   QSSG S
Sbjct: 838 TRIPEWLDQQSSGHS 852


>gi|357507539|ref|XP_003624058.1| TMV resistance protein N [Medicago truncatula]
 gi|355499073|gb|AES80276.1| TMV resistance protein N [Medicago truncatula]
          Length = 1127

 Score =  309 bits (792), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 250/780 (32%), Positives = 371/780 (47%), Gaps = 124/780 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+A+++    EF+ +CF+ +VR  SE A GL H+Q+Q+LS      L ++  +  +
Sbjct: 228 KTTIARAVYEAIQCEFQTTCFLENVREISE-ANGLVHIQRQLLS-----HLSISRNDFHN 281

Query: 80  F------TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFR 133
                   +  + R K+L+VLDDVNE+ QL+ L G+ D FG GSR+++TTRDK  L    
Sbjct: 282 LYDGKKTIQNSLCRKKVLLVLDDVNEINQLENLAGKQDWFGPGSRVIITTRDKHWL--IT 339

Query: 134 GEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSL 193
               + Y V  L   EA   FC  AFK +   E     S+ VV Y  G PL LEVLGS L
Sbjct: 340 HGVHQPYEVGMLFQNEALNVFCLKAFKGDKPQEGYLDLSKEVVEYAGGLPLALEVLGSYL 399

Query: 194 CLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFV 253
             +    W   + ++     + + +I D LKIS+  L    K+IFLDI+CFF+G  +D V
Sbjct: 400 YGRSVDLWHSAIKNIR---SAPLREIQDKLKISYESLDAMEKNIFLDISCFFKGMKRDKV 456

Query: 254 ASILDDSESD---VLDILIDKSLVSIS--GNFLNMHDILQEMGRQIVRQESEKEPGKRSR 308
            +IL++        + +LID+SL+++    N L MHD+LQEMGR IV QES  +PGKRSR
Sbjct: 457 INILENCGYHPEITIQVLIDRSLITLDRVNNKLGMHDLLQEMGRNIVIQESPNDPGKRSR 516

Query: 309 LWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIE 368
           LW  ++I RVL  NKGT+ I  + L+  +         AF+  + ++L            
Sbjct: 517 LWSKEDIDRVLTKNKGTEKISSVVLNSLQPYEARWSTEAFSMATQIKL------------ 564

Query: 369 KLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSK 428
                     LS ++V LP GL  LP  L+ L W   PL+TL    +   +V++ L  S+
Sbjct: 565 ----------LSLNEVHLPLGLSCLPSSLKVLRWRGCPLKTLAQTNQLDEVVDIKLSHSQ 614

Query: 429 VEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP 488
           +E  W+G      + ++N KYL                          N  +  NL   P
Sbjct: 615 LELLWQG-----INFMENLKYL--------------------------NLKFSKNLKRLP 643

Query: 489 QISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
              G   + +L L G +++ EV  S+     + +++L  CK L+ +     ++ SL  LI
Sbjct: 644 DFYGVPNLEKLILKGCASLTEVHPSLVHHNKVVLVNLEDCKSLEALPEKL-EMSSLKELI 702

Query: 546 LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
           L GC   +  PE  E ME+L  +    T +  L SS   L GL  L ++DC  L  LPD 
Sbjct: 703 LSGCCEFKFLPEFGESMENLSILALQGTALRNLTSSLGRLVGLTDLNLKDCKSLVCLPDT 762

Query: 606 IGSLEYLYYI-LAAASAISQLPSSVA--------------------LSNMLRSLDSSHCK 644
           I  L  L  + ++  S + +LP  +                     L + L+ L  + CK
Sbjct: 763 IHGLNSLRVLDISGCSKLCRLPDGLKEIKCLEELHANDTSIDELYRLPDSLKVLSFAGCK 822

Query: 645 GL-----------------ESFPRTFLLGLSAMGL-------LHISDYAVREIPQEIAYL 680
           G                  +  P  F    SA  L       L   D +   IP     L
Sbjct: 823 GTLAKSMNRFIPFNRMRASQPAPTGFRFPHSAWNLPSLKHINLSYCDLSEESIPHYFLQL 882

Query: 681 SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           +SL  L L+GNNF ++P+ I ++S+L  + L     LQ LPELP  +  L   +C  L++
Sbjct: 883 TSLVSLDLTGNNFVTIPSSISELSKLELLTLNCCEKLQLLPELPPSIMQLDASNCDSLET 942


>gi|359473396|ref|XP_002268358.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1438

 Score =  308 bits (790), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 309/1063 (29%), Positives = 472/1063 (44%), Gaps = 202/1063 (19%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM-- 61
            S++++++G++G GG+GK+TLAKA++++    FE   F+S+V+       GL  LQ ++  
Sbjct: 208  SNSIRVLGLYGPGGVGKSTLAKALYNKLVAHFENRSFISNVKKYLAQENGLLSLQIKLIG 267

Query: 62   -LSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGE---LDQFGQGS 117
             LS   S   EV    +    K  V+  ++LI+LDDV++  QL  + G       F +GS
Sbjct: 268  DLSGMASHVNEVNAGLVA--IKSIVQEKRVLIILDDVDDASQLTAIAGRKKWRKWFYEGS 325

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI++TTRD+ VL +    E ++Y V  L   E+ + F ++A        D    S+ +VS
Sbjct: 326  RIIITTRDREVLHEL--HENELYEVKQLNSPESLQLFSHYALGRVKPTPDYLPLSKQIVS 383

Query: 178  YTKGNPLVLEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
             T G PL LEV GSSL  KRK   W   L  L +I      D+  +LKIS++ L  + K 
Sbjct: 384  LTGGLPLALEVFGSSLYDKRKIEEWEDALQKLKQI---RPMDLQGVLKISYDGLDEQEKC 440

Query: 237  IFLDIACFF--EGEDKDFVASILDDS--ESDV-LDILIDKSLVSISGNF-LNMHDILQEM 290
            +FLDIAC F   G  K+    IL      +++ + +L+DKSL+ I+ ++ L MHD L++M
Sbjct: 441  VFLDIACLFIKMGMKKEDAIDILKGCGFRAEIGIKVLVDKSLLKIAEDYTLWMHDQLRDM 500

Query: 291  GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL-------------SK 337
            GRQIV  E+ ++ G RSRLWD  EI RVL++N G+  I+G+ LD               +
Sbjct: 501  GRQIVLHENHEDLGMRSRLWDRSEILRVLQNNLGSRCIQGMVLDFVSDIFMKDSAAAWGR 560

Query: 338  IKGINLDPRAFTNMSNLR-LFKFYVPKFYEIEK--------LPSMSTEEQLSYSKVQLPN 388
             +G    P   T ++ L+  +K Y     E E+          SM     L    VQL  
Sbjct: 561  FRGT---PNFTTAVTWLKETYKEYFQHAAEKERELILQTKSFESMINLRLLQIDNVQLEG 617

Query: 389  GLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSK-VE----QPWEGEK------ 437
                +P +L++L W   PL+TLPS+F P+ L  L+L  SK +E    + W GE       
Sbjct: 618  EFKLMPAELKWLQWRGCPLKTLPSDFCPQGLRVLDLSESKNIERLWGESWVGENLMVMNL 677

Query: 438  --ACVPSSIQNF---KYLSALSFKGCQSLRSFPSNL-HFVCPVTINFSYCVNLIEFPQ-I 490
               C  ++I +    + L  L  + C  L     ++   +  + ++ S C NL+EFP  +
Sbjct: 678  HGCCNLTAIPDLSGNQALEKLILQHCHGLVKIHKSIGDIISLLHLDLSECKNLVEFPSDV 737

Query: 491  SG--------------------------KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRG 524
            SG                           +  L L  + IE++P S+  LT LE L L  
Sbjct: 738  SGLKNLQTLILSGCSKLKELPENISYMKSLRELLLDGTVIEKLPESVLRLTRLERLSLNN 797

Query: 525  CKRLKRIST-----------------------SFCKLRSLVTLILLGCLNLEHFPEILEK 561
            C+ LK++ T                       SF  L +L  L L+ C ++   P+ +  
Sbjct: 798  CQSLKQLPTCIGKLESLRELSFNDSALEEIPDSFGSLTNLERLSLMRCQSIYAIPDSVRN 857

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASA 621
            ++ L     + +P+ ELP+S  +L  L+ L V  C  L  LP +I  L  +  +    ++
Sbjct: 858  LKLLTEFLMNGSPVNELPASIGSLSNLKDLSVGHCRFLSKLPASIEGLASMVVLQLDGTS 917

Query: 622  ISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLS 681
            I  LP  +     LR L+   CK LES P   +  + ++  L I D  + E+P+ I  L 
Sbjct: 918  IMDLPDQIGGLKTLRRLEMRFCKRLESLPEA-IGSMGSLNTLIIVDAPMTELPESIGKLE 976

Query: 682  SLEILYLSG-NNFESLPAIIKQMSQLRFIHLED---------FNMLQSLPELPLCLKYLH 731
            +L +L L+       LP  I  +  L  + +E+         F ML SL  L L  K  H
Sbjct: 977  NLIMLNLNKCKRLRRLPGSIGNLKSLHHLKMEETAVRQLPESFGMLTSLMRL-LMAKRPH 1035

Query: 732  L--------IDCKMLQS-----LPVLPFCLESLDLT------------------------ 754
            L         + K+L +     L VLP    +L L                         
Sbjct: 1036 LELPQALGPTETKVLGAEENSELIVLPTSFSNLSLLYELDARAWKISGKIPDDFDKLSSL 1095

Query: 755  -----GCNMLRSLPELPLCLQYLN---LEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPE 806
                 G N   SLP     L  L    L  C  L++LP LP  L  +   NC  L+ + +
Sbjct: 1096 EILNLGRNNFSSLPSSLRGLSILRKLLLPHCEELKALPPLPSSLMEVNAANCYALEVISD 1155

Query: 807  I--LLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSL 864
            +  L  LQEL+ +  +KL           E LKS    F  + C   +     ++   +L
Sbjct: 1156 LSNLESLQELNLTNCKKLVDIP-----GVECLKSLK-GFFMSGCSSCSSTVKRRLSKVAL 1209

Query: 865  LRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFS 907
              +R ++I                         PGS IPDWFS
Sbjct: 1210 KNLRTLSI-------------------------PGSNIPDWFS 1227


>gi|13517474|gb|AAK28809.1|AF310962_1 resistance-like protein P3-B [Linum usitatissimum]
          Length = 1188

 Score =  308 bits (790), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 261/825 (31%), Positives = 408/825 (49%), Gaps = 113/825 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEG--SCFVSDVRGNSETAGGLEHLQ 58
           MD  D   I+G+WGMGG+GKTTLA+A +D+ +   +G    F+ +V    E   G++ + 
Sbjct: 196 MDKLDDTCIIGLWGMGGVGKTTLAEACYDRVTSSNKGIKHLFIRNVNEMCEKHHGVDKIV 255

Query: 59  KQMLSTTLSE-KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRL-IGEL----DQ 112
            ++ S  L E  ++    NI  + +ER+ R+++ +VLD+V  + QL++L +G +      
Sbjct: 256 HKLYSKLLDENNIDREDLNIA-YRRERLSRLRVFVVLDNVETLEQLEKLALGYVFNLSKV 314

Query: 113 FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
           F  GSRI++TTR+K+VL+       KIY V  L  EE+   F   AFK++  P+D NW  
Sbjct: 315 FAAGSRIIITTRNKKVLQNAMA---KIYNVECLNDEESIRLFSLHAFKQDR-PQD-NWMG 369

Query: 173 RS--VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
           +S    SY KGNPL L++LG +L  +   +W  +L  L    +S    +  IL+ S++KL
Sbjct: 370 KSCLATSYCKGNPLALKILGGALFDEDVHYWKSLLTGLR---QSGNLGMETILRRSYDKL 426

Query: 231 TPRVKSIFLDIACFFEGEDK----DFVASILDDSESDVLDILIDKSLV----SISGNFLN 282
               K IF+D+AC   G  +    D++A++   S   V D LIDKSL+    S +G  + 
Sbjct: 427 GKEEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVKVKD-LIDKSLLTCVPSENGEMIE 485

Query: 283 MHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLK---------------------- 320
           +HD+L+EM   IV++E +   GKRSRL DP ++ ++L                       
Sbjct: 486 VHDLLKEMAWNIVKEEPKL--GKRSRLVDPDDVHKLLSTSEVKNWSTSIVNLFKGIVMVI 543

Query: 321 -----------HNKGTDAI------EGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPK 363
                      H KG D +      EGI LDLSK K + L   AF  M++L   KF  P+
Sbjct: 544 PKRKKRKVTDMHQKGDDPLEEHRTTEGIRLDLSKTKEMYLKANAFEGMNSLTFLKFESPE 603

Query: 364 F-YEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
             Y   +L ++ T+  L Y      +GL+ LP+ LR+L WD YP ++LP+ F P++LV L
Sbjct: 604 IKYPRYRLKNVKTKIHLPY------DGLNSLPEGLRWLQWDGYPSKSLPAKFYPQHLVHL 657

Query: 423 NLRCSKVEQPWEGEKA------------------CVPSSIQNFKYLSALSFKGCQSLRSF 464
            +R S +++ WEG                      +P    +      L F GC+SL   
Sbjct: 658 IIRDSPIQRCWEGYDQPQLVNLIVLDLCYCANLIAIPDISSSLNIEELLLF-GCKSLVEV 716

Query: 465 PSNLHFVCP-VTINFSYCVNLIEFP-----QISGKVTRLYLGQSAIEEVPSSIECLTDLE 518
           P ++ ++   VT++ SYC NL   P     ++   V   YL  +   E+ S      +LE
Sbjct: 717 PFHVQYLTKLVTLDISYCENLKPLPPKLDSKLLKHVRMKYLEITLCPEIDSR-----ELE 771

Query: 519 VLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITEL 578
             DL G   L  + ++   ++    L L G  N+  FP I      LKR   + T I E+
Sbjct: 772 EFDLSGTS-LGELPSAIYNVKQNGVLYLHG-KNITKFPPITTT---LKRFTLNGTSIREI 826

Query: 579 PSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSL 638
               +     + L++ D  +L+ LP++I ++     I+  +  I  LP      N L SL
Sbjct: 827 DHLADYHQQHQNLWLTDNRQLEVLPNSIWNMVSGRLIIGLSPLIESLPEISEPMNTLTSL 886

Query: 639 DSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS-GNNFESLP 697
               C+ L S P T +  L ++G L +S   ++ +P  I  L  L ++ L    + ES+P
Sbjct: 887 RVCCCRSLTSIP-TSISNLRSLGSLCLSKTGIKSLPSSIQELRQLHMIELRYCESLESIP 945

Query: 698 AIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
             I ++S+L    +    ++ SLPELP  LK L +  CK LQ+LP
Sbjct: 946 NSIHKLSKLVTFSMSGCEIIISLPELPPNLKELDVSGCKSLQALP 990


>gi|357499649|ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]
 gi|355495128|gb|AES76331.1| Resistance protein PRG [Medicago truncatula]
          Length = 1256

 Score =  308 bits (790), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 260/762 (34%), Positives = 374/762 (49%), Gaps = 109/762 (14%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S+D V +VGI+GMGG GKTTLA+AI++  + +FE  CF+ +VR  S    GLE LQ++
Sbjct: 214 VGSNDAVCLVGIYGMGGSGKTTLAQAIYNFIADQFECLCFLHNVREIS-AKHGLEDLQEK 272

Query: 61  MLSTT--LSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS T  LS K       IP   KER+R  K+L++LDDV+E+ QLK L G+ +  G GSR
Sbjct: 273 LLSKTVGLSVKFGHVSEGIP-IIKERLRLKKVLLILDDVDELKQLKVLAGDPNWLGHGSR 331

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +VVTTRDK +L     E  + Y ++GL  EEA E     AFK N             V+Y
Sbjct: 332 VVVTTRDKHLLACHGIE--RTYELDGLNKEEALELLKWKAFKNNKVDSSYEHILNRAVTY 389

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+GSSL  K K  W   L    RI   E+     ILK+SF+ L    +S+F
Sbjct: 390 ASGLPLALEVVGSSLFGKHKDEWKSTLDRYERIPHKEV---LKILKVSFDSLEKDEQSVF 446

Query: 239 LDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSI----SGNFLNMHDILQEM 290
           LDIAC F G    E +D + +   +     + +LI+K L+ I       ++ +HD+++EM
Sbjct: 447 LDIACCFRGYILAEVEDILYAHYGECMKYHIRVLIEKCLIKIYRQCGCTYVTLHDLIEEM 506

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLD--LSKIKG-INLDPRA 347
           G++IVRQES KEPGKRSRLW  K+I +VL+ N GT  IE I+++  LSK +  +      
Sbjct: 507 GKEIVRQESPKEPGKRSRLWFHKDIVQVLEENLGTSKIEIIYMESPLSKEEEVVEWKGDE 566

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
              M NL+ F     +F                        GL++LP  LR L W +YP 
Sbjct: 567 LKKMENLKTFIIKRGRF----------------------SKGLEHLPNNLRVLEWRSYPS 604

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPS-----SIQNFKYLSALSFKGCQSLR 462
           +  PS F  K L    LR           ++C  S     SI+ F  +  L    CQ L 
Sbjct: 605 QDSPSIFWQKKLSICKLR-----------ESCFTSFELHDSIKKFVNMRELILDHCQCLI 653

Query: 463 SFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDL 522
              +        T +F  C NLI                     V +S+  L  L++L+ 
Sbjct: 654 RIHNVSGLPNLETFSFQCCKNLI--------------------TVHNSVGLLNKLKILNA 693

Query: 523 RGCKRLKRISTSF--CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPS 580
           + C +L    TSF   KL SL  L L  C +L+ FPEIL +++++ RI    T I ELP 
Sbjct: 694 KRCSKL----TSFPPMKLTSLHELELSYCTSLKSFPEILGEIKNVTRILLRGTFIEELPY 749

Query: 581 SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS-LD 639
           SF NL GL  L +   S+   LP  I  +  L  I A    + Q  +    S  + S + 
Sbjct: 750 SFRNLSGLHRLLIWG-SRNVRLPFGILMMPNLARIEAYGCLLFQKDNDKLCSTTMSSCVQ 808

Query: 640 SSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAI 699
              CK                        +V  +P  ++ +++++ L LSG+NF  LP  
Sbjct: 809 FLRCK-----------------------LSVEFLPIVLSQITNVKDLVLSGSNFTILPEC 845

Query: 700 IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           +K+ + L+ + L++   LQ +  +P  LK++  + C+ L  L
Sbjct: 846 LKECNFLQSLELDNCKSLQEIRGIPPNLKHVSALRCESLTYL 887



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 129/316 (40%), Gaps = 41/316 (12%)

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
           S CKLR         C       + ++K  +++ +  D         +   LP LE    
Sbjct: 617 SICKLRE-------SCFTSFELHDSIKKFVNMRELILDHCQCLIRIHNVSGLPNLETFSF 669

Query: 594 EDCSKLDNLPDNIGSLEYLYYILAA-ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
           + C  L  + +++G L  L  + A   S ++  P     S  L  L+ S+C  L+SFP  
Sbjct: 670 QCCKNLITVHNSVGLLNKLKILNAKRCSKLTSFPPMKLTS--LHELELSYCTSLKSFPE- 726

Query: 653 FLLG-LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
            +LG +  +  + +    + E+P     LS L  L + G+    LP  I  M  L  I  
Sbjct: 727 -ILGEIKNVTRILLRGTFIEELPYSFRNLSGLHRLLIWGSRNVRLPFGILMMPNLARIEA 785

Query: 712 EDFNMLQSLPE------LPLCLKYLHLIDCKMLQSLPVLPFCL------ESLDLTGCNML 759
               + Q   +      +  C+++L    CK+  S+  LP  L      + L L+G N  
Sbjct: 786 YGCLLFQKDNDKLCSTTMSSCVQFLR---CKL--SVEFLPIVLSQITNVKDLVLSGSN-F 839

Query: 760 RSLPE-LPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDA 816
             LPE L  C  LQ L L++C  L+ +  +P  L+ ++   C  L  L    L  QEL  
Sbjct: 840 TILPECLKECNFLQSLELDNCKSLQEIRGIPPNLKHVSALRCESLTYLCRWKLLNQELHE 899

Query: 817 SVLEKLSKHSPDLQWA 832
           +        S D +WA
Sbjct: 900 A-------GSTDFRWA 908


>gi|357494181|ref|XP_003617379.1| CCP [Medicago truncatula]
 gi|355518714|gb|AET00338.1| CCP [Medicago truncatula]
          Length = 1651

 Score =  308 bits (789), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 243/750 (32%), Positives = 368/750 (49%), Gaps = 91/750 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KT LAK+++++  H+FE + F+++VR  S    GLE LQK +LS    +     G     
Sbjct: 224 KTELAKSLYNKIVHQFEAASFLANVREKSNKINGLEDLQKTLLSEMFEKPDTDLGSTSKG 283

Query: 80  FT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRG-EE 136
               K+++   K+L+VLDDV+   QLK L G  D FG GSRI++TTRDK +L        
Sbjct: 284 IKEIKQKLGNKKVLLVLDDVDNKEQLKNLAGGSDWFGPGSRIIITTRDKGLLIGTHSFVV 343

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
           +KIY +  L  +++ E FC  AF ++H        S   V Y KG PL L+V+GS+L   
Sbjct: 344 QKIYEMTELNEKDSLELFCRNAFGKSHPETGYEAVSSRAVGYAKGLPLALKVIGSNLGGG 403

Query: 197 RK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           +    W   L + +RI    I ++   L++S+N L P  +S+FLDIACFF+G+  D+V  
Sbjct: 404 KSLRAWEDALKNYDRIPRRGIQEV---LQVSYNVLEPNAQSVFLDIACFFKGDRVDYVEE 460

Query: 256 ILDD-SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
           ILDD +    ++ L++KSL+ +    L+MHD++QEMGR IV+QES + P KRSRLW  K+
Sbjct: 461 ILDDFAAVTGIEELVNKSLLIVKDGCLDMHDLIQEMGRDIVKQESPRNPAKRSRLWSHKD 520

Query: 315 ISRVLKHNK-GTDAIEGIFLDLSK-IKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
           I +VL + K G+D ++GI LD  + IK  +    AF  M+ LR+          I +  +
Sbjct: 521 IIKVLSNEKYGSDVLQGIMLDPPQPIKQQDWSDTAFEQMNCLRIL---------IVRNTT 571

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKV--E 430
            S+E +             +LP  L  L W+ YP ++ P+ F P+ ++  NL  SK+  E
Sbjct: 572 FSSEPK-------------HLPDNLTLLDWEEYPSKSFPAMFHPEEIIVFNLPESKLTLE 618

Query: 431 QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
           +P+           + F  L+ ++F   +S+   P          +    C NLI     
Sbjct: 619 EPF-----------KVFSKLTIMNFSKNESITVIPDVSGVENLRVLRLDNCTNLIM---- 663

Query: 491 SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
                           V  S+  L  L      GC +L+        L SL  L L  C+
Sbjct: 664 ----------------VHESVGFLEHLTHFSASGCAKLRNFQQKMF-LPSLEFLDLNLCV 706

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
            LEHFP+IL KM    +IY   T I ELP S  NL GL  + +    KL  +P +     
Sbjct: 707 ELEHFPDILNKMNKPLKIYMINTAIEELPDSIGNLIGLVSIEMTSSWKLKYIPCS----- 761

Query: 611 YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV 670
            L+ +  A +      S +AL   L  + S+              G S +  LH  +  +
Sbjct: 762 -LFTLPNAVTFKFGGCSQLALRRFLHDIPSAAN------------GRSTLKALHFGNSGL 808

Query: 671 REIPQEIAYLSSLEI--LYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC-- 726
            +   +   +S LE+  L  S NNF SLP  IK  + L  + +   NML+   E+P+C  
Sbjct: 809 SDEDLKAILISFLELQELIASDNNFVSLPVCIKDSAHLTKLDVSGCNMLR---EIPVCIN 865

Query: 727 LKYLHLIDCKMLQSLPVLPFCLESLDLTGC 756
           L+ L++  C ML+ +  LP  ++ +D   C
Sbjct: 866 LRILNVYGCVMLEHISELPCTIQKVDARYC 895


>gi|356561818|ref|XP_003549175.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1122

 Score =  308 bits (789), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 252/764 (32%), Positives = 368/764 (48%), Gaps = 115/764 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V I+GI GMGG+GKTTLA A+ +  +  F+ SCF+ +VR  S    GL+HLQ  
Sbjct: 242 VGSHDVVHIIGIHGMGGLGKTTLALAVHNFIALHFDESCFLQNVREES-NKHGLKHLQSI 300

Query: 61  MLSTTLSEK--LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS  L EK     +        + R++R K+L++LDDV++  QLK ++G  D FG GSR
Sbjct: 301 LLSKLLGEKDITLTSWQEGASMIQHRLQRKKVLLILDDVDKRQQLKAIVGRPDWFGPGSR 360

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRDK +L+    E ++ Y V  L    A +     AFK              VV+Y
Sbjct: 361 VIITTRDKHLLK--YHEVERTYEVKVLNQSAALQLLTWNAFKREKIDPSYEDVLNRVVTY 418

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+GS+L  K  + W   +    RI   EI +I   LK+SF+ L    K++F
Sbjct: 419 ASGLPLALEVIGSNLFEKTVAEWESAMEHYKRIPSDEIQEI---LKVSFDALGEEQKNVF 475

Query: 239 LDIACFFEGEDKDFVASILDDSESDV----LDILIDKSLVSISG-NFLNMHDILQEMGRQ 293
           LDIAC F+G +   V +IL D   +     + +L++KSLV +S  + + MHD++Q+MGR+
Sbjct: 476 LDIACCFKGYEWTEVDNILRDLYGNCTKHHIGVLVEKSLVKVSCCDTVEMHDMIQDMGRE 535

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS---KIKGINLDPRAFTN 350
           I RQ S +EPGK  RL  PK+I +VLK N GT  IE I LD S   K + +  +  AF  
Sbjct: 536 IERQRSPEEPGKCKRLLLPKDIIQVLKDNTGTSKIEIICLDFSISDKEETVEWNENAFMK 595

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M NL++      KF                        G +Y P+ LR L W  YP   L
Sbjct: 596 MKNLKILIIRNCKF----------------------SKGPNYFPEGLRVLEWHRYPSNCL 633

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY-------LSALSFKGCQSLRS 463
           PSNF P NLV   L                 SSI +F++       L  L+F  C+ L  
Sbjct: 634 PSNFDPINLVICKLP---------------DSSITSFEFHGSSKASLKILNFDRCEFLTK 678

Query: 464 FPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLR 523
            P          ++F++C +L+                     V  SI  L  L+ L   
Sbjct: 679 IPDVSDLPNLKELSFNWCESLV--------------------AVDDSIGFLNKLKTLSAY 718

Query: 524 GCKRLKRISTSF--CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
           GC++L    TSF    L SL TL L GC +LE+FPEIL +M+++  +     PI ELP S
Sbjct: 719 GCRKL----TSFPPLNLTSLETLNLGGCSSLEYFPEILGEMKNITVLALHDLPIKELPFS 774

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYL--YYILAAASAISQLPSSVALSNMLRSL- 638
           F+NL GL  L+++ C  +  L  ++ ++  L  + I  + +    + S      ++ S+ 
Sbjct: 775 FQNLIGLLFLWLDSCG-IVQLRCSLATMPKLCEFCITDSCNRWQWVESEEGEEKVVGSIL 833

Query: 639 --DSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL 696
             +++ C   + F   F +G                    + YL+      L GNNF  L
Sbjct: 834 SFEATDCNLCDDF---FFIGSKRFA--------------HVGYLN------LPGNNFTIL 870

Query: 697 PAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           P   K++  L  + + D   LQ +  LP  LK+    +C  L S
Sbjct: 871 PEFFKELQFLTTLVVHDCKHLQEIRGLPPNLKHFDARNCASLTS 914



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 113/481 (23%), Positives = 184/481 (38%), Gaps = 122/481 (25%)

Query: 488 PQISGKVTRLYLGQSAIEEV-----PSSIE--CLTDLEVLDLRGCKRLKRISTSFCKLRS 540
           P+  GK  RL L +  I+ +      S IE  CL D  + D    + ++    +F K+++
Sbjct: 542 PEEPGKCKRLLLPKDIIQVLKDNTGTSKIEIICL-DFSISDKE--ETVEWNENAFMKMKN 598

Query: 541 LVTLILLGCL---NLEHFPEILEKMEHLKRIYSDRTPITELPSSFE-------NLP---- 586
           L  LI+  C       +FPE L  +E        R P   LPS+F+        LP    
Sbjct: 599 LKILIIRNCKFSKGPNYFPEGLRVLEW------HRYPSNCLPSNFDPINLVICKLPDSSI 652

Query: 587 -----------GLEVLFVEDCSKLDNLPD-----NIGSLEYLYYILAAASAISQLPSSVA 630
                       L++L  + C  L  +PD     N+  L + +       ++  +  S+ 
Sbjct: 653 TSFEFHGSSKASLKILNFDRCEFLTKIPDVSDLPNLKELSFNW-----CESLVAVDDSIG 707

Query: 631 LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
             N L++L +  C+ L SFP   L  L  + L   S  ++   P+ +  + ++ +L L  
Sbjct: 708 FLNKLKTLSAYGCRKLTSFPPLNLTSLETLNLGGCS--SLEYFPEILGEMKNITVLALHD 765

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQ---SLPELPLCLKYLHLIDCKMLQSLPV---- 743
              + LP   + +  L F+ L+   ++Q   SL  +P   ++     C   Q +      
Sbjct: 766 LPIKELPFSFQNLIGLLFLWLDSCGIVQLRCSLATMPKLCEFCITDSCNRWQWVESEEGE 825

Query: 744 --LPFCLESLDLTGCNMLRSL----PELPLCLQYLNLEDCNMLRSLPELPLCLQLLT--- 794
             +   + S + T CN+         +    + YLNL   N    LPE    LQ LT   
Sbjct: 826 EKVVGSILSFEATDCNLCDDFFFIGSKRFAHVGYLNLPG-NNFTILPEFFKELQFLTTLV 884

Query: 795 VRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGK 854
           V +C  LQ                         +++  P +LK     F+  NC  L   
Sbjct: 885 VHDCKHLQ-------------------------EIRGLPPNLKH----FDARNCASLTSS 915

Query: 855 ANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSS 914
           + +                       M +N++L E  G   V PG+ IP+WF  QSSG S
Sbjct: 916 SKS-----------------------MLLNQELHEAGGIEFVFPGTSIPEWFDQQSSGHS 952

Query: 915 I 915
           I
Sbjct: 953 I 953


>gi|356561802|ref|XP_003549167.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1048

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 256/753 (33%), Positives = 365/753 (48%), Gaps = 94/753 (12%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           +S   V IVGI+G+GG+GKTTLA+A+++  + +F+G CF+ DVR N+ T  GL HLQ+ +
Sbjct: 210 ESDTGVHIVGIYGIGGMGKTTLARAVYNSIADQFKGLCFLDDVRENA-TKHGLIHLQEML 268

Query: 62  LSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           LS  + EK    G      +  K R++R K+L++LDDV+++ QL+  +G  + FG GSR+
Sbjct: 269 LSEIVGEKDIKIGSVSKGISIIKHRLQRKKILLILDDVDKLEQLRATVGGPNWFGSGSRV 328

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENH---CPEDLNWHSRSVV 176
           +VTTRDK +L    G ++K Y V  L  EE+ E  C  AFK++    C +D+   S   V
Sbjct: 329 IVTTRDKHLLAS-HGVDRK-YEVEDLNEEESLELLCWNAFKDDKVDPCYKDI---SSQAV 383

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           +Y  G PL LEV+GS L  K    W   L    +I    I DI   LK+S+N L    + 
Sbjct: 384 AYASGLPLALEVVGSLLFGKGIKEWESALEQYKKIPNKRIQDI---LKVSYNALEEDQQK 440

Query: 237 IFLDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
           IFLDIAC  +G    E +D + +         + +L+DKSL+ I    + +H++++ MG+
Sbjct: 441 IFLDIACCLKGYELAEVEDILCAHYGVCMKYGIGVLVDKSLIKIKNGRVTLHELIEVMGK 500

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-----INLDPRA 347
           +I RQES KE GK  RLW  K+I +VL  N GT  IE I LD    +      +  D  A
Sbjct: 501 EIDRQESPKELGKHRRLWFHKDIIQVLAENTGTSEIEIISLDFPLFEEDEEAYVEWDGEA 560

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F  M NL+                       L         G  +LP  LR L W TYPL
Sbjct: 561 FKKMENLK----------------------TLIIRNSHFSKGPTHLPNSLRVLEWWTYPL 598

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSI-QNFKYLSALSFKGCQSLRSFPS 466
           + LP++F    L    L       P     +   S I + F  L+ L+F G + L   P 
Sbjct: 599 QDLPTDFHSNKLAICKL-------PRSCFTSLELSGISKKFMNLTVLNFDGTECLTQIPD 651

Query: 467 NLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCK 526
                  V + F  C NL+                     +  S+  L  L++L   GC 
Sbjct: 652 ISSLQNLVKLTFECCENLV--------------------AIHDSVGFLDKLKILSAFGCG 691

Query: 527 RLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLP 586
           +L  +S    KL SL  L L  C +LE FPEIL KME++ ++    TP+ E P SF NL 
Sbjct: 692 KL--MSFPPIKLISLEQLDLSSCSSLESFPEILGKMENITQLELKYTPLKEFPFSFRNLA 749

Query: 587 GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS-HCKG 645
            L  L + DC  +  LP +I  L  L  I A       LP        + S+ S+ +C  
Sbjct: 750 RLRDLVLVDCGNV-QLPISIVMLPELAQIFALGCKGLLLPKQDKDEEEVSSMSSNVNC-- 806

Query: 646 LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQ 705
                    L LS   L   SD      P  +A+ S+++ L LS NNF  LP  IK+   
Sbjct: 807 ---------LCLSGCNL---SD---EYFPMVLAWFSNVKELELSCNNFTFLPECIKECHS 851

Query: 706 LRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
           L  ++L++   LQ +  +P  L+Y    +CK L
Sbjct: 852 LILLNLDNCEHLQEIRGIPPNLEYFSAGNCKSL 884


>gi|15230525|ref|NP_190725.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6572078|emb|CAB63021.1| propable disease resistance protein [Arabidopsis thaliana]
 gi|332645286|gb|AEE78807.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1226

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 218/673 (32%), Positives = 360/673 (53%), Gaps = 59/673 (8%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           +  +I+G+ GM GIGKTTLA+ I++    +F     + D+R  S+     EH    + + 
Sbjct: 228 EETRILGVVGMPGIGKTTLAREIYETLRCKFLRHGLIQDIRRTSK-----EHGLDCLPAL 282

Query: 65  TLSEKLEVAGPNIPHFT------KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            L E L V  P+I          K  +   K+L+VLDDV++  Q+  L+G  +   QGSR
Sbjct: 283 LLEELLGVTIPDIESTRCAYESYKMELHTHKVLVVLDDVSDKEQIDVLLGRCNWIRQGSR 342

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKEN---HCPEDLNWHSRSV 175
           IV+ T DK +++         Y V  L  ++   HF  +AF  +   H  E +   S+  
Sbjct: 343 IVIATSDKSLIQDV---ADYTYVVPQLNHKDGLGHFGRYAFDRHSNIHNNEVIMKLSKEF 399

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           V Y +G+PLVL++LG+ L  K + HW   L  L    E+  H I D+L++S+++L+   K
Sbjct: 400 VHYGRGHPLVLKLLGADLNGKDEDHWKTKLATL---AENSSHSIRDVLQVSYDELSQVHK 456

Query: 236 SIFLDIACFFEGEDKDFVASILDDSE-SDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
            IFLDIAC F  ED+ ++AS+LD SE +  +  L++K ++++S + + MHD+L    R++
Sbjct: 457 DIFLDIAC-FRSEDESYIASLLDSSEAASEIKALMNKFMINVSEDRVEMHDLLYTFAREL 515

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSN 353
            R+   ++  +  RLW  ++I+ VLK+ +    + GIFL+++++K  ++LD   F +M  
Sbjct: 516 CRRAYAQDGREPHRLWHHQDITDVLKNIEEGAEVRGIFLNMNEMKREMSLDSCTFKSMCG 575

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LR  K Y           S   ++    +K+ LP+GL++  K++RYLHW  +PL+ +P +
Sbjct: 576 LRYLKIY----------SSHCPQQCKPNNKINLPDGLNFPLKEVRYLHWLEFPLKEIPPD 625

Query: 414 FKPKNLVELNLRCSKVEQPWEGEK-ACVP----------------SSIQNFKYLSALSFK 456
           F P+NLV+L L  SK+E+ W  +K    P                S +   + L  L+ K
Sbjct: 626 FNPQNLVDLKLPHSKIERIWSDDKHKDTPKLKWVNLSHSSNLWDISGLSKAQRLVFLNLK 685

Query: 457 GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTD 516
           GC SL+S P  ++ V    +  S C NL EF  IS  +  LYL  ++I+E+P +   L  
Sbjct: 686 GCTSLKSLPE-INLVSLEILILSNCSNLKEFRVISQNLETLYLDGTSIKELPLNFNILQR 744

Query: 517 LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPIT 576
           L +L+++GC +LK        L++L  LIL  C  L++FP I E+++ L+ +  D T IT
Sbjct: 745 LVILNMKGCAKLKEFPDCLDDLKALKELILSDCWKLQNFPAICERIKVLEILRLDTTTIT 804

Query: 577 ELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNML 635
           E+P     +  L+ L +     + +LPDNI  L  L ++ L    +++ +P    L   L
Sbjct: 805 EIPM----ISSLQCLCLSKNDHISSLPDNISQLSQLKWLDLKYCKSLTSIPK---LPPNL 857

Query: 636 RSLDSSHCKGLES 648
           + LD+  C  L++
Sbjct: 858 QHLDAHGCCSLKT 870



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 109/464 (23%), Positives = 192/464 (41%), Gaps = 69/464 (14%)

Query: 565  LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQ 624
            ++RI+SD           ++ P L+ + +   S L ++     +   ++  L   +++  
Sbjct: 641  IERIWSD--------DKHKDTPKLKWVNLSHSSNLWDISGLSKAQRLVFLNLKGCTSLKS 692

Query: 625  LPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLE 684
            LP    +S  L  L  S+C  L+ F R     L     L++   +++E+P     L  L 
Sbjct: 693  LPEINLVS--LEILILSNCSNLKEF-RVISQNLET---LYLDGTSIKELPLNFNILQRLV 746

Query: 685  ILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI--DCKMLQSL 741
            IL + G    +  P  +  +  L+ + L D   LQ+ P +   +K L ++  D   +  +
Sbjct: 747  ILNMKGCAKLKEFPDCLDDLKALKELILSDCWKLQNFPAICERIKVLEILRLDTTTITEI 806

Query: 742  PVLPFCLESLDLTGCNMLRSLPE---LPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNC 798
            P++   L+ L L+  + + SLP+       L++L+L+ C  L S+P+LP  LQ L    C
Sbjct: 807  PMIS-SLQCLCLSKNDHISSLPDNISQLSQLKWLDLKYCKSLTSIPKLPPNLQHLDAHGC 865

Query: 799  NRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNK 858
              L+++   L CL                       + +     F  TNC KL   A  +
Sbjct: 866  CSLKTVSNPLACLT----------------------TAQQIYSTFILTNCNKLERSAKEE 903

Query: 859  ILADSLLRIRHMAIASLRLGYEMAINEK----LSELRGSL------------------IV 896
            I + +  + + +  A  R      I+      +S++  S+                  I 
Sbjct: 904  ISSFAQRKCQLLLDAQKRCNVSSLISFSICCYISKIFVSICIFLSISMQNSDSEPLFSIC 963

Query: 897  LPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQF 956
             PGSE+P WF +++ G  + +++PPH     L G A CAV+   K   +    F V   F
Sbjct: 964  FPGSELPSWFCHEAVGPVLELRMPPHWHENRLAGVALCAVVTFPK-SQEQINCFSVKCTF 1022

Query: 957  DLEIKTLSETKH---VDLGYNSRYIEDLIDSDRVILGFKPCLNV 997
             LE+K  S  +    V    N   I   I S+ V +G+  C  +
Sbjct: 1023 KLEVKEGSWIEFSFPVGRWSNQGNIVANIASEHVFIGYISCSKI 1066


>gi|356542395|ref|XP_003539652.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1396

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 258/798 (32%), Positives = 375/798 (46%), Gaps = 143/798 (17%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNS-ETAGGLEHLQK 59
           ++S DTV I+ I+G GGIGKTT A  I++   HEFE + F+++VR  S ++  GLE LQK
Sbjct: 207 IESHDTVLILEIYGAGGIGKTTFALDIYNNIRHEFEAASFLANVREKSNKSTEGLEDLQK 266

Query: 60  QMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
            +LS  + E+ E+ G +     K R+   K+L+VLDDV+   QL+ L+G  D FG  SRI
Sbjct: 267 TLLSE-MGEETEIIGASE---IKRRLGHKKVLLVLDDVDSTKQLESLVGGGDWFGSRSRI 322

Query: 120 VVTTRDKRVLEKFRGEEKKI--YRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           ++TTRD  +L++   ++  I  Y +  L + ++ E FC  AF  +   E+    S   V 
Sbjct: 323 IITTRDTTLLDEHVIDDVVIETYEMKALNYGDSLELFCWHAFNMSKPAENFEGVSNDAVR 382

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y KG+PL L+V+GS+L       W   L     I  ++I ++   L+IS++ L    + I
Sbjct: 383 YAKGHPLALKVIGSNLKGGSLKDWEMELEKYKMIPNAKIQEV---LEISYHSLDVLDQKI 439

Query: 238 FLDIACFFEGEDKDFVASILDDSE-SDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIV 295
           FLDIACFF+GE + +V  IL   +    + +   K L++I  +  L+MHD++Q+MGR+IV
Sbjct: 440 FLDIACFFKGERRGYVERILKACDFCPSIGVFTAKCLITIDEDGCLDMHDLIQDMGREIV 499

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR---AFTNMS 352
           R+ES    G RSRLW  +E+ RVL  N G++ IEGI LD    + +  D R   AF  M 
Sbjct: 500 RKESSINAGDRSRLWSHEEVLRVLIENSGSNRIEGIMLDPPSHEKV--DDRIDTAFEKME 557

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NLR+       F      PS                   YLP  LR L W  YP ++ P 
Sbjct: 558 NLRILIIRNTTF---STAPS-------------------YLPNTLRLLEWKGYPSKSFPP 595

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           +F P  +V+  L  S +               ++FK    L+F                 
Sbjct: 596 DFYPTKIVDFKLNHSSLMLE------------KSFKKYEGLTF----------------- 626

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
              IN S C ++   P +SG +                     +L+VL L  C++LK   
Sbjct: 627 ---INLSQCQSITRIPDVSGAI---------------------NLKVLTLDKCRKLKGFD 662

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
            S   +R+LV +  L C  L+ F                      +PS   +LP LEVL 
Sbjct: 663 KSIGFMRNLVYVSALRCNMLKSF----------------------VPSM--SLPSLEVLS 698

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
              CS+L++ PD +  ++    I    +AI + P S+     L  LD S CK L    + 
Sbjct: 699 FSFCSRLEHFPDVMEEMDRPLKIQLVNTAIKEFPMSIGKLTGLEYLDISGCKKLNISRKL 758

Query: 653 FLL----GLSAMGLLHISDYAVR--EIPQEIAYLSSLEILYLSGNNF--ESLPAIIKQMS 704
           FLL     L   G  HI     R  E         +L  L+LS  N   E L AI+K   
Sbjct: 759 FLLPKLETLLVDGCSHIGQSFKRFKERHSMANGCPNLRTLHLSETNLSNEELYAILKGFP 818

Query: 705 QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE 764
           +L  + +  +N   SLPE   C+K     D K L+SL          D++ C  L S+PE
Sbjct: 819 RLEALKVS-YNDFHSLPE---CIK-----DSKQLKSL----------DVSYCKNLSSIPE 859

Query: 765 LPLCLQYLNLEDCNMLRS 782
           LP  +Q +N   C  L S
Sbjct: 860 LPPSIQKVNARYCGRLTS 877



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 139/365 (38%), Gaps = 91/365 (24%)

Query: 578 LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
           L  SF+   GL  + +  C  +  +PD  G++      L     +     S+     L  
Sbjct: 614 LEKSFKKYEGLTFINLSQCQSITRIPDVSGAINLKVLTLDKCRKLKGFDKSIGFMRNLVY 673

Query: 638 LDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS-GNNFESL 696
           + +  C  L+SF                       +P     L SLE+L  S  +  E  
Sbjct: 674 VSALRCNMLKSF-----------------------VPS--MSLPSLEVLSFSFCSRLEHF 708

Query: 697 PAIIKQMSQLRFIHLEDFNMLQSLPELPLC------LKYLHLIDCKML---QSLPVLPFC 747
           P ++++M +   I L +     ++ E P+       L+YL +  CK L   + L +LP  
Sbjct: 709 PDVMEEMDRPLKIQLVN----TAIKEFPMSIGKLTGLEYLDISGCKKLNISRKLFLLP-K 763

Query: 748 LESLDLTGCN--------------MLRSLPEL-PLCLQYLNLEDCNMLRSLPELPLCLQL 792
           LE+L + GC+              M    P L  L L   NL +  +   L   P  L+ 
Sbjct: 764 LETLLVDGCSHIGQSFKRFKERHSMANGCPNLRTLHLSETNLSNEELYAILKGFPR-LEA 822

Query: 793 LTVRNCNRLQSLPEILL---CLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCL 849
           L V + N   SLPE +     L+ LD S  + LS   P+L   P S++     +    C 
Sbjct: 823 LKV-SYNDFHSLPECIKDSKQLKSLDVSYCKNLSS-IPEL---PPSIQKVNARY----CG 873

Query: 850 KLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQ 909
           +L  +A+N + +                     +NE+   ++    V+  ++IPDWF   
Sbjct: 874 RLTSEASNSLWS--------------------KVNEEKERIQ---FVMAETDIPDWFEFD 910

Query: 910 SSGSS 914
             G S
Sbjct: 911 CVGGS 915


>gi|297805566|ref|XP_002870667.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316503|gb|EFH46926.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1104

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 218/646 (33%), Positives = 332/646 (51%), Gaps = 91/646 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           SD V+++GIWG  GIGKTTLA+A+F+Q S  F  SCF+  +  N   +     LQ ++LS
Sbjct: 206 SDDVKMIGIWGPAGIGKTTLARALFNQLSTRFRRSCFMGTIDVNDYDSKLC--LQNKLLS 263

Query: 64  TTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             L++K       + H    KE +   ++LIVLDDV+++ QL+ L  E   FG GSRI+V
Sbjct: 264 KILNQK----DMRVHHLGAIKEWLHDQRVLIVLDDVDDLEQLEVLAKETSWFGPGSRIIV 319

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           T +DK++L+     +  IY V+    +EAFE FC  AFK++   +     +R VV     
Sbjct: 320 TLKDKKILKAHGIND--IYHVDYPSEKEAFEIFCLSAFKQSSPQDGFEELARKVVELCGN 377

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L V+GSS   + +  W   L+ +    + +I ++   L++ ++KL+ R +S+FL I
Sbjct: 378 LPLALRVVGSSFYGESEDEWRIQLYGIETNLDRKIENV---LRVGYDKLSERHQSLFLHI 434

Query: 242 ACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
           ACFF  +  D+V ++L DS  DV   L+ L  KSLVS +G ++ MH +LQ++GRQ+V Q+
Sbjct: 435 ACFFNHKSVDYVTTMLADSVLDVENGLNTLAAKSLVSTNG-WITMHCLLQQLGRQVVLQQ 493

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
            +  PGKR  L + KEI  VL +  GT+++ GI  D+SKI+ +++  RAF  M NL+   
Sbjct: 494 GD--PGKRQFLVEAKEIRDVLANETGTESVIGISFDISKIEALSISKRAFNRMRNLKFLN 551

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
           FY                       + L   ++YLP+ LR LHW +YP ++LP  FKP+ 
Sbjct: 552 FY--------------------NGNISLLEDMEYLPR-LRLLHWGSYPRKSLPLAFKPEC 590

Query: 419 LVELNLRCSKVEQPWEG------------------------EKAC--------------- 439
           LVEL +  SK+E+ W G                         KA                
Sbjct: 591 LVELYMGSSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPNLSKATNLKTLTLTGCESLVE 650

Query: 440 VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
           +PSSI N + L  L   GC  L+  P+N++      +N S C  L  FP +S  + RLY+
Sbjct: 651 IPSSILNLQKLEMLYASGCSKLQVIPTNINLASLEEVNMSNCSRLRSFPDMSSNIKRLYV 710

Query: 500 GQSAIEEVPSSI---ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
             + I+E P+SI    C  D   +  R  KRL  +  S       VT + L   +++  P
Sbjct: 711 AGTMIKEFPASIVGQWCRLDFLQIGSRSFKRLTHVPES-------VTHLDLRNSDIKMIP 763

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNL 602
           + +  + HL  +  +    T+L S   + P L  LF + C  L ++
Sbjct: 764 DCIIGLSHLVSLLVENC--TKLVSIQGHSPSLVTLFADHCISLQSV 807



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 155/375 (41%), Gaps = 75/375 (20%)

Query: 558 ILEKMEHLKRI---YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
           +LE ME+L R+   +    P   LP +F+  P   V      SKL+ L   I  L  L  
Sbjct: 559 LLEDMEYLPRLRLLHWGSYPRKSLPLAFK--PECLVELYMGSSKLEKLWGGIQPLTNLKK 616

Query: 615 I-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
           I L  +S + ++P+    +N L++L  + C+ L                         EI
Sbjct: 617 INLGYSSNLKEIPNLSKATN-LKTLTLTGCESL------------------------VEI 651

Query: 674 PQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
           P  I  L  LE+LY SG +  + +P  I  ++ L  +++ + + L+S P++   +K L+ 
Sbjct: 652 PSSILNLQKLEMLYASGCSKLQVIPTNI-NLASLEEVNMSNCSRLRSFPDMSSNIKRLY- 709

Query: 733 IDCKMLQSLP---VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLC 789
           +   M++  P   V  +C       G    + L  +P  + +L+L + + ++ +P+  + 
Sbjct: 710 VAGTMIKEFPASIVGQWCRLDFLQIGSRSFKRLTHVPESVTHLDLRNSD-IKMIPDCIIG 768

Query: 790 LQLLT---VRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFT 846
           L  L    V NC +L S+       Q    S++   + H   LQ    S         F 
Sbjct: 769 LSHLVSLLVENCTKLVSI-------QGHSPSLVTLFADHCISLQSVCCSFHGPISKSMFY 821

Query: 847 NCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWF 906
           NCLKL+ ++   I+  S                               I LPG EIP  F
Sbjct: 822 NCLKLDKESKRGIIQQS---------------------------GNKSICLPGKEIPAEF 854

Query: 907 SNQSSGSSICIQLPP 921
           ++Q+SG+ I I L P
Sbjct: 855 THQTSGNLITISLAP 869



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 73/137 (53%), Gaps = 4/137 (2%)

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           +  LY+G S +E++   I+ LT+L+ ++L     LK I  +  K  +L TL L GC +L 
Sbjct: 591 LVELYMGSSKLEKLWGGIQPLTNLKKINLGYSSNLKEIP-NLSKATNLKTLTLTGCESLV 649

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
             P  +  ++ L+ +Y+      ++  +  NL  LE + + +CS+L + PD   +++ LY
Sbjct: 650 EIPSSILNLQKLEMLYASGCSKLQVIPTNINLASLEEVNMSNCSRLRSFPDMSSNIKRLY 709

Query: 614 YILAAASAISQLPSSVA 630
               A + I + P+S+ 
Sbjct: 710 ---VAGTMIKEFPASIV 723


>gi|27764545|gb|AAO23075.1| R 5 protein [Glycine max]
          Length = 907

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 247/741 (33%), Positives = 356/741 (48%), Gaps = 103/741 (13%)

Query: 20  KTTLAKAIFDQF--SHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNI 77
           K+TLA+A+++    +  F+G CF+ +VR +S   G L+HLQ  +LS  L E ++V     
Sbjct: 221 KSTLARAVYNDLIITENFDGLCFLENVRESSNNHG-LQHLQSILLSEILGEDIKVRSKQQ 279

Query: 78  P-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
                +  ++  K+L++LDDV++  QL+ + G  D FG GS I++TTRDK++L       
Sbjct: 280 GISKIQSMLKGKKVLLILDDVDKPQQLQTIAGRRDWFGPGSIIIITTRDKQLLAPH--GV 337

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
           KK Y V  L    A +     AFK              VV+Y  G PL LEV+GS++  K
Sbjct: 338 KKRYEVEVLNQNAALQLLTWNAFKREKIDPSYEDVLNRVVTYASGLPLALEVIGSNMFGK 397

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEG----EDKDF 252
           R + W   +    RI   EI    +ILK+SF+ L    K++FLDIAC F+G    E +  
Sbjct: 398 RVAEWKSAVEHYKRIPNDEI---LEILKVSFDALGEEQKNVFLDIACCFKGCKLTEVEHM 454

Query: 253 VASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           +  + ++     +D+L+DKSL+ +    +NMHD++Q +GR+I RQ S +EPGK  RLW P
Sbjct: 455 LRGLYNNCMKHHIDVLVDKSLIKVRHGTVNMHDLIQVVGREIERQISPEEPGKCKRLWLP 514

Query: 313 KEISRVLKHNKGTDAIEGIFLDLS---KIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEK 369
           K+I +VLKHN GT  IE I LD S   K + +  +  AF  M NL++      KF     
Sbjct: 515 KDIIQVLKHNTGTSKIEIICLDFSISDKEQTVEWNQNAFMKMENLKILIIRNGKF----- 569

Query: 370 LPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKV 429
                              G +Y P+ LR L W  YP + LPSNF P NL+   L  S +
Sbjct: 570 -----------------SKGPNYFPEGLRVLEWHRYPSKCLPSNFHPNNLLICKLPDSSM 612

Query: 430 EQ-PWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP 488
               + G           F +L+ L F  C+ L   P           + S   NL E  
Sbjct: 613 ASFEFHGS--------SKFGHLTVLKFDNCKFLTQIP-----------DVSDLPNLRELS 653

Query: 489 QISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF--CKLRSLVTLIL 546
                    + G  ++  V  SI  L  L+ L+  GC++L    TSF    L SL TL L
Sbjct: 654 ---------FKGCESLVAVDDSIGFLNKLKKLNAYGCRKL----TSFPPLNLTSLETLQL 700

Query: 547 LGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC------SKLD 600
            GC +LE+FPEIL +ME++K++     PI ELP SF+NL GL+VL++  C       +L 
Sbjct: 701 SGCSSLEYFPEILGEMENIKQLVLRDLPIKELPFSFQNLIGLQVLYLWSCLIVELPCRLV 760

Query: 601 NLPDNIG-SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSA 659
            +P+     +EY        S   +      LS+  R   + +C   + F   FL G   
Sbjct: 761 MMPELFQLHIEYCNRWQWVESEEGEEKVGSILSSKARWFRAMNCNLCDDF---FLTGSKR 817

Query: 660 MGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQS 719
                                + +E L LSGNNF  LP   K++  LR + + D   LQ 
Sbjct: 818 --------------------FTHVEYLDLSGNNFTILPEFFKELKFLRTLDVSDCEHLQK 857

Query: 720 LPELPLCLKYLHLIDCKMLQS 740
           +  LP  LK    I+C  L S
Sbjct: 858 IRGLPPNLKDFRAINCASLTS 878



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 116/274 (42%), Gaps = 26/274 (9%)

Query: 561 KMEHLKRIYSDRTP-ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILA-A 618
           K  HL  +  D    +T++P    +LP L  L  + C  L  + D+IG L  L  + A  
Sbjct: 622 KFGHLTVLKFDNCKFLTQIPD-VSDLPNLRELSFKGCESLVAVDDSIGFLNKLKKLNAYG 680

Query: 619 ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIPQEI 677
              ++  P     S  L +L  S C  LE FP   +LG +  +  L + D  ++E+P   
Sbjct: 681 CRKLTSFPPLNLTS--LETLQLSGCSSLEYFPE--ILGEMENIKQLVLRDLPIKELPFSF 736

Query: 678 AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE----------LPLCL 727
             L  L++LYL       LP  +  M +L  +H+E  N  Q +            L    
Sbjct: 737 QNLIGLQVLYLWSCLIVELPCRLVMMPELFQLHIEYCNRWQWVESEEGEEKVGSILSSKA 796

Query: 728 KYLHLIDCKMLQSLPVLP----FCLESLDLTGCNMLRSLPELPLCLQYL---NLEDCNML 780
           ++   ++C +     +        +E LDL+G N    LPE    L++L   ++ DC  L
Sbjct: 797 RWFRAMNCNLCDDFFLTGSKRFTHVEYLDLSG-NNFTILPEFFKELKFLRTLDVSDCEHL 855

Query: 781 RSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL 814
           + +  LP  L+     NC  L S  + +L  Q L
Sbjct: 856 QKIRGLPPNLKDFRAINCASLTSSSKSMLLNQVL 889


>gi|297791257|ref|XP_002863513.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309348|gb|EFH39772.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1327

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 314/1065 (29%), Positives = 484/1065 (45%), Gaps = 186/1065 (17%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
             +S++  ++VG+ GM GIGKTTLAK + + + +EF  + F+ DVR  S+    + +LQ +
Sbjct: 234  FESNEVTRVVGVVGMPGIGKTTLAKKVLEDWGYEFSHTMFLDDVREKSKYPE-IHNLQME 292

Query: 61   MLSTTLSEKLEVAGPN----IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            +L    + K E         +  F K  V + K+L VLDDV+E  Q++ ++GE +   +G
Sbjct: 293  LLCGLTNIKYERKEQTETDLLLKFLKVEVSKNKVLFVLDDVSEKSQIENILGESEWLKEG 352

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            S++++TT  K V+   +G   + Y V GL   +A  +F   AF  + C       +R  V
Sbjct: 353  SKVLITTNSKSVV---KGMVNETYLVPGLSDNDALNYFERHAFSVS-CEPSFMKLAREFV 408

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
             Y++GNPL L+VLG  L  K+KS+W   L  L +   S  + I ++L+I ++ L+   K+
Sbjct: 409  EYSRGNPLALKVLGGELLGKQKSYWESKLGTLAKSPIS--NTIQNVLRIPYDDLSLHHKN 466

Query: 237  IFLDIACFFEGEDKDFVASILDDS-ESDVLDI--LIDKSLVSISGNFLNMHDILQEMGRQ 293
            +FLD+ACFF  ED+  V S LD S   +V +I  L DK L++I G  L ++D++      
Sbjct: 467  LFLDVACFFRFEDEYHVRSFLDSSVHENVSEIKDLADKFLINICGGRLEINDLMYTFAMG 526

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMS 352
            +  Q S ++     RL +  EI  VL++      + GIFLD+S++ K + L    F  M+
Sbjct: 527  LESQSSSEDCTSGRRLSNHGEIITVLRNKVEATKVRGIFLDMSEVPKEMKLSSDTFKEMN 586

Query: 353  NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            +LR  KF+           S   +E  +   +  PNGL +  +K+RYLHW  +PL+  P 
Sbjct: 587  DLRYLKFF----------DSSCPKECEADCNLNFPNGLRFTLEKIRYLHWLKFPLKIFPR 636

Query: 413  NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSAL-SFKGCQSLRSFPSNLHFV 471
            +F PKNL++L L  S++EQ W+GEK        +  + S L +  G    R+  S     
Sbjct: 637  SFNPKNLIDLKLPYSQLEQVWKGEKDTSKLKWLDLNHSSKLRTLSGLSLARNLQS----- 691

Query: 472  CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
                +N   C  L                    E V   ++ +  L  L+LRGC  L+ +
Sbjct: 692  ----MNLEGCTKL--------------------EAVHHELKNMGSLLFLNLRGCTSLESL 727

Query: 532  STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
                 KL SL TLIL GC N++ F  I EK+E L   Y D T I  LPS   NL  L +L
Sbjct: 728  PK--IKLNSLKTLILSGCSNVDEFNLISEKLEEL---YLDGTAIKGLPSDIGNLQRLVLL 782

Query: 592  FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
             ++DC KL +LPD I +L+ L  ++ +                        C  L SFP 
Sbjct: 783  KLKDCKKLLSLPDTIRNLKALEKLILSG-----------------------CSSLVSFP- 818

Query: 652  TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
                                E+ Q + +L +L    L G   + +  ++ ++S    I+ 
Sbjct: 819  --------------------EVKQNLKHLKTL---LLDGTAIKDVHDVVHRLS----INQ 851

Query: 712  EDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCL-- 769
              F+   S     LC ++ H I+   L S+  L  CL   D T      SLPE  + L  
Sbjct: 852  GQFS---SFTHYDLC-EWRHGING--LSSVQRL--CLSRNDFT------SLPESIMYLYN 897

Query: 770  -QYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPD 828
             ++L+L+ C  L SLP LP  L  L    C  L+++   L  L                 
Sbjct: 898  LKWLDLKYCKQLTSLPMLPPNLHWLDADGCISLKNIENSLSLLLA--------------- 942

Query: 829  LQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLS 888
               A E L S    F F+NC KL+  A N I++    +I+ M+ A +       ++  + 
Sbjct: 943  ---ATEQLHST---FIFSNCKKLDQVAKNDIVSYVRRKIQLMSDALVHKNKGSILDVLIK 996

Query: 889  ELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFR 948
                  I  PG ++P WF ++S GS +   LP H +   L G A C V+  K        
Sbjct: 997  ------ICYPGWQLPVWFDHRSVGSELKQNLPRHWNEDGLTGIALCVVVSFKD------- 1043

Query: 949  YFYVSFQFDLEIKTLSETKHVD---------LGYNSRYIED-----LIDSDRVILGFKPC 994
              Y      L ++  SE K  D         LG  ++ I D     +  S  V +G+   
Sbjct: 1044 --YKDHNTRLLVRCTSEFKKEDAPLIQFSCILGGWTKQISDNPGDIVEPSGHVFIGYTNL 1101

Query: 995  LNVGFPDGYHHTIAT---FKFFAERKFYKIK-----RCGLCPVYA 1031
            L+V   D     + T   FKF       ++      +CG   +YA
Sbjct: 1102 LHVMKRDRGAKCVGTEVSFKFEVTDGAKQVTNCEVLKCGFTLIYA 1146


>gi|105922810|gb|ABF81438.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1524

 Score =  306 bits (785), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 223/630 (35%), Positives = 333/630 (52%), Gaps = 69/630 (10%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
           KTT+++ ++D+   +FEGSCF+++VR       G   LQ+Q+LS  L E+  V   +   
Sbjct: 320 KTTVSRVLYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEILMERASVWDSSRGI 379

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRG-EEK 137
              K R+R  K+L++LDDV++  QL+ L  E   FG  SRI++T+RDK V   F G ++ 
Sbjct: 380 EMIKRRLRLKKILLILDDVDDKKQLEFLAAEPGWFGPRSRIIITSRDKNV---FTGNDDT 436

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           KIY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV+GS L  + 
Sbjct: 437 KIYEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFLYGRS 496

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W   ++ ++ I + +I    D+L+ISF+ L    + IFLDIACF +G  KD +  IL
Sbjct: 497 IPEWRGAINRMHEIPDCKI---MDVLRISFDGLHESDQKIFLDIACFLKGFKKDRITRIL 553

Query: 258 DDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
           D    +    + +LI++SL+S+ G+ + MH++LQ MG++IVR E  KEPGKRSRLW  ++
Sbjct: 554 DSCGFNAGIGIPVLIERSLISVYGDQVWMHNLLQIMGKEIVRCEDPKEPGKRSRLWTYED 613

Query: 315 ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
           +S  L  N G + IE IFLD+  IK    + +AF+ MS LRL K                
Sbjct: 614 VSLALMDNTGKEKIEAIFLDMPGIKEAQWNMKAFSKMSRLRLLKI--------------- 658

Query: 375 TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
                    VQL  G + L K+LR+L W +YP ++LP+  +   LVEL++  S +EQ W 
Sbjct: 659 -------DNVQLSEGPEDLSKELRFLEWHSYPSKSLPAGLQVDGLVELHMANSSIEQLWY 711

Query: 435 GEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG-- 492
           G K+ V     N K                           IN S  +NL + P ++G  
Sbjct: 712 GCKSAV-----NLK--------------------------VINLSNSLNLSKTPDLTGIP 740

Query: 493 KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
            ++ L L G +++ EV  S+    +L+ ++L  CK   RI  S  ++ SL    L GC  
Sbjct: 741 NLSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSF-RILPSNLEMESLKVFTLDGCTK 799

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
           LE FP+I+  M  L  +  D T I EL SS  +L GLEVL + +C  L+++P +IG L+ 
Sbjct: 800 LEKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKS 859

Query: 612 LYYI-LAAASAISQLPSSVALSNMLRSLDS 640
           L  + L+  S +  +P ++     L   D 
Sbjct: 860 LKKLDLSGCSELKNIPENLGKVESLEEFDG 889



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 143/302 (47%), Gaps = 54/302 (17%)

Query: 657 LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF--ESLPAIIKQMSQLRFIHLEDF 714
           +S + LL I +  + E P+++    S E+ +L  +++  +SLPA + Q+  L  +H+ + 
Sbjct: 650 MSRLRLLKIDNVQLSEGPEDL----SKELRFLEWHSYPSKSLPAGL-QVDGLVELHMANS 704

Query: 715 NMLQSLP--ELPLCLKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSL-PELPL-- 767
           ++ Q     +  + LK ++L +   L   P L     L SL L GC  L  + P L    
Sbjct: 705 SIEQLWYGCKSAVNLKVINLSNSLNLSKTPDLTGIPNLSSLILEGCTSLSEVHPSLGRHK 764

Query: 768 CLQYLNLEDCNMLRSLP-ELPL-CLQLLTVRNCNRLQSLPEI---LLCLQEL--DASVLE 820
            LQY+NL +C   R LP  L +  L++ T+  C +L+  P+I   + CL EL  D + + 
Sbjct: 765 NLQYVNLVNCKSFRILPSNLEMESLKVFTLDGCTKLEKFPDIVGNMNCLMELCLDGTGIA 824

Query: 821 KLSK---HSPDLQWAP-------ESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHM 870
           +LS    H   L+          ES+ S+  C +    L L+G +  K + ++L ++  +
Sbjct: 825 ELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIPENLGKVESL 884

Query: 871 ----AIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQ-----SSGSSICIQLPP 921
                +++ R G+ +A               PG+EIP WF+++       GS   I+L  
Sbjct: 885 EEFDGLSNPRPGFGIA--------------FPGNEIPGWFNHRKLKEWQHGSFSNIELSF 930

Query: 922 HS 923
           HS
Sbjct: 931 HS 932



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 64/305 (20%), Positives = 123/305 (40%), Gaps = 51/305 (16%)

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLE-----VLDLRGCKRLKRISTSFCKLRS 540
           E P+  GK +RL+      E+V  ++   T  E      LD+ G K  +    +F K+ S
Sbjct: 597 EDPKEPGKRSRLW----TYEDVSLALMDNTGKEKIEAIFLDMPGIKEAQWNMKAFSKM-S 651

Query: 541 LVTLILLGCLNLEHFPEILEK--------------------MEHLKRIYSDRTPITELPS 580
            + L+ +  + L   PE L K                    ++ L  ++   + I +L  
Sbjct: 652 RLRLLKIDNVQLSEGPEDLSKELRFLEWHSYPSKSLPAGLQVDGLVELHMANSSIEQLWY 711

Query: 581 SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS 640
             ++   L+V+ + +   L   PD  G       IL   +++S++  S+     L+ ++ 
Sbjct: 712 GCKSAVNLKVINLSNSLNLSKTPDLTGIPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNL 771

Query: 641 SHCKGLESFPRTFLLGLSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSGNNFESLPAI 699
            +CK     P    L + ++ +  +     + + P  +  ++ L  L L G     L + 
Sbjct: 772 VNCKSFRILPSN--LEMESLKVFTLDGCTKLEKFPDIVGNMNCLMELCLDGTGIAELSSS 829

Query: 700 IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNML 759
           I  +  L  + + +   L+S+P    CLK                   L+ LDL+GC+ L
Sbjct: 830 IHHLIGLEVLSMNNCKNLESIPSSIGCLK------------------SLKKLDLSGCSEL 871

Query: 760 RSLPE 764
           +++PE
Sbjct: 872 KNIPE 876


>gi|357513919|ref|XP_003627248.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521270|gb|AET01724.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1106

 Score =  306 bits (783), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 219/629 (34%), Positives = 326/629 (51%), Gaps = 98/629 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V+ +GIWGM GIGKTT+A+ ++     E+ G  F ++VR      G + HL+K++ S
Sbjct: 237 SQDVRAIGIWGMSGIGKTTIAEEVYSMLCSEYSGCYFKANVREECRRHG-IIHLKKKLFS 295

Query: 64  TTLSEK-LEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
           T L E+ L++  P+ +P+    R+R MK+L+VLDDV++  QL  LIG LD FG+GSRI++
Sbjct: 296 TLLGEQDLKIDTPHRLPYRDFVRLRTMKVLVVLDDVSDQEQLDILIGTLDWFGKGSRIII 355

Query: 122 TTRDKRVLEK--FRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH-SRSVVSY 178
           TT DK+VL K  F  +   IY V  L F+++   F   AF++N   +   +  S+ +V Y
Sbjct: 356 TTVDKQVLGKGVFAND---IYEVRPLNFDDSLRLFNLNAFEQNQTYQIEYYELSKRMVKY 412

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
            KG PL+LE+LG  L  K K  W      L R+ +  I   ++I+++S+N L    K +F
Sbjct: 413 AKGIPLILEILGRKLRGKDKKEWED---QLERVKKVPIKKFHEIIRLSYNDLNRHEKRMF 469

Query: 239 LDIACFFEG-----EDKDFVASILDDSESDVLDILIDKSLVSIS-GNFLNMHDILQEMGR 292
           LDIACF +G     +D   +A  L       L+ L +K+L++IS  N ++MH I+QE   
Sbjct: 470 LDIACFIDGLHLNVDDIKLLAKDLGYPVGVELESLKNKALINISPDNVVSMHTIIQETAW 529

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           + VR+ES  +P  +SRL D  +  +VLKHN+G++AI  I  D S IK + L+ + F  M+
Sbjct: 530 EFVREESIDDPENQSRLVD-YDTYQVLKHNRGSEAIRSIATDFSIIKDLQLNSKVFAKMN 588

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            L+    Y   +Y   ++P            + LP GL  LP +LRYL W  YPL +LPS
Sbjct: 589 KLQYLDIYTKGYYVFFQIP----------RSLNLPQGLKSLPDELRYLRWAYYPLESLPS 638

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACV----------------PS-------------- 442
            F  + LV LNL+ S+V++ W  +K  V                P+              
Sbjct: 639 KFNGEKLVVLNLQNSQVKKLWHEDKDVVNLKFLILSLSSQLMELPNLSKAKNLAIVDLRM 698

Query: 443 ---------SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS-- 491
                    S+ +   L  L   GC SL S  SN+H      ++ + C+ L EF   S  
Sbjct: 699 CGRLTSIHPSVFSLNKLEKLDLGGCFSLTSLKSNIHLSSLRYLSLAGCIKLKEFSVTSKE 758

Query: 492 ---------------------GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                                 K+ +L L  S IE +P SI  L+ L  L+LR C++L+R
Sbjct: 759 MVLLNLEHTGIKQLSSSIGLQTKLEKLLLSHSFIENLPKSIRRLSSLRHLELRHCRKLQR 818

Query: 531 ISTSFCKL-RSLVTLILLGCLNLEH--FP 556
           +     KL  SL+TL   GC++LE+  FP
Sbjct: 819 LP----KLPSSLITLDATGCVSLENVTFP 843



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 28/206 (13%)

Query: 568 IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLP 626
           I S  + + ELP+       L ++ +  C +L ++  ++ SL  L  + L    +++ L 
Sbjct: 672 ILSLSSQLMELPN-LSKAKNLAIVDLRMCGRLTSIHPSVFSLNKLEKLDLGGCFSLTSLK 730

Query: 627 SSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL 686
           S++ LS+ LR L  + C  L+ F  T       M LL++    ++++   I   + LE L
Sbjct: 731 SNIHLSS-LRYLSLAGCIKLKEFSVTS----KEMVLLNLEHTGIKQLSSSIGLQTKLEKL 785

Query: 687 YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF 746
            LS +  E+LP  I+++S LR  HLE                   L  C+ LQ LP LP 
Sbjct: 786 LLSHSFIENLPKSIRRLSSLR--HLE-------------------LRHCRKLQRLPKLPS 824

Query: 747 CLESLDLTGCNMLRSLPELPLCLQYL 772
            L +LD TGC  L ++      LQ L
Sbjct: 825 SLITLDATGCVSLENVTFPSRALQVL 850



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 178/425 (41%), Gaps = 66/425 (15%)

Query: 606 IGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS------HCKGLESFPRTFLLGLSA 659
           +  L+YL           Q+P S+ L   L+SL             LES P  F      
Sbjct: 587 MNKLQYLDIYTKGYYVFFQIPRSLNLPQGLKSLPDELRYLRWAYYPLESLPSKF--NGEK 644

Query: 660 MGLLHISDYAVREIPQEIAYLSSLEILYLS-GNNFESLPAI----------IKQMSQLRF 708
           + +L++ +  V+++  E   + +L+ L LS  +    LP +          ++   +L  
Sbjct: 645 LVVLNLQNSQVKKLWHEDKDVVNLKFLILSLSSQLMELPNLSKAKNLAIVDLRMCGRLTS 704

Query: 709 IHLEDFNMLQSLPELPL----------------CLKYLHLIDCKMLQSLPVLP--FCLES 750
           IH   F+ L  L +L L                 L+YL L  C  L+   V      L +
Sbjct: 705 IHPSVFS-LNKLEKLDLGGCFSLTSLKSNIHLSSLRYLSLAGCIKLKEFSVTSKEMVLLN 763

Query: 751 LDLTGCNMLRSLPELPLCLQYLNLEDC---NMLRSLPELPLCLQLLTVRNCNRLQSLPEI 807
           L+ TG   L S   L   L+ L L      N+ +S+  L   L+ L +R+C +LQ LP++
Sbjct: 764 LEHTGIKQLSSSIGLQTKLEKLLLSHSFIENLPKSIRRLS-SLRHLELRHCRKLQRLPKL 822

Query: 808 LLCLQELDAS---VLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSL 864
              L  LDA+    LE ++  S  LQ     LK       F NC+KL   +   I  ++ 
Sbjct: 823 PSSLITLDATGCVSLENVTFPSRALQ----VLKENKTKVSFWNCVKLVEHSLKAIELNA- 877

Query: 865 LRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSS 924
            +I  M  A  ++      ++   + +G+  V PGS +P W   +++ + + I L   + 
Sbjct: 878 -QINMMKFAHKQISTS---SDHDYDAQGTY-VYPGSSVPKWLVYRTTRNYMFIDLSFVNH 932

Query: 925 CRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDS 984
             + + F FC ++   +V+S+ F       +F++ +   +E   V L   S+ I+    S
Sbjct: 933 SSDQLAFIFCFIV--PQVESEGF-----ILRFNISVGGEAENIQVYLNKPSQEIK----S 981

Query: 985 DRVIL 989
           D V L
Sbjct: 982 DHVYL 986


>gi|356570357|ref|XP_003553356.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1119

 Score =  306 bits (783), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 243/765 (31%), Positives = 365/765 (47%), Gaps = 109/765 (14%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V +VGI G+GGIGKTTLA AI++  +  FE  CF+ +VR  S+T G L++LQ+ 
Sbjct: 212 VGSDDVVHMVGIHGLGGIGKTTLAAAIYNSIADHFEALCFLENVRETSKTHG-LQYLQRN 270

Query: 61  MLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           +LS T+ E   +         + R+++ K+L++LDDV++  QL+ L+G  D F  GSR++
Sbjct: 271 LLSETVGEDELIGVKQGISIIQHRLQQKKVLLILDDVDKREQLQALVGRPDLFCPGSRVI 330

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFK---ENHCPEDLNWHSRSVVS 177
           +TTRDK++L       K+ Y VN L  E A +     AFK    N C +D+       V+
Sbjct: 331 ITTRDKQLLACH--GVKRTYEVNELNEEYALQLLSWKAFKLEKVNPCYKDV---LNRTVT 385

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y+ G PL LEV+GS+L  +    W   L    RI   EI +I   LK+S++ L    +S+
Sbjct: 386 YSAGLPLALEVIGSNLSGRNIEQWRSTLDRYKRIPNKEIQEI---LKVSYDALEEDEQSV 442

Query: 238 FLDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNFLNMHDILQEMGRQ 293
           FLDI+C  +  D   V  IL       ++    +L++KSL+ IS  ++ +HD++++MG++
Sbjct: 443 FLDISCCLKEYDLKEVQDILRAHYGHCMEHHIRVLLEKSLIKISDGYITLHDLIEDMGKE 502

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINL--DPRAFTNM 351
           IVR+ES +EPGKRSRLW   +I +VL+ NKGT  IE I  D S  + + +  D  AF  M
Sbjct: 503 IVRKESPREPGKRSRLWLHTDIIQVLEENKGTSQIEIICTDFSLFEEVEIEWDANAFKKM 562

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NL+                       L         G  +LP  LR L W  YP ++ P
Sbjct: 563 ENLK----------------------TLIIKNGHFTKGPKHLPDTLRVLEWWRYPSQSFP 600

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
           S+F+PK L    L                P+S      L+ L  K             FV
Sbjct: 601 SDFRPKKLAICKL----------------PNSGYTSLELAVLLKK------------KFV 632

Query: 472 CPVTINFSYCVNLIEFPQIS--GKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRL 528
               +NF  C +L + P +S   K+ +L       +  +  S+  L  L +LD  GC RL
Sbjct: 633 NLTNLNFDSCQHLTQIPDVSCVPKLEKLSFKDCDNLHAIHQSVGLLEKLRILDAEGCSRL 692

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
           K       KL SL  L L  C +LE FPEIL KME++  +   +TP+ + P SF NL  L
Sbjct: 693 KNFPP--IKLTSLEQLRLGFCHSLESFPEILGKMENIIHLNLKQTPVKKFPLSFRNLTRL 750

Query: 589 EVLFV-----EDCSKLDNLPDNIGSLEYLYYILAAASAISQLPS--------SVALSNML 635
             LFV     +     D L  +I ++     ++       +           S+  S+ +
Sbjct: 751 HTLFVCFPRNQTNGWKDILVSSICTMPKGSRVIGVGWEGCEFSKEDEGAENVSLTTSSNV 810

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFES 695
           + LD  +C   + F                        P  +   ++++ L LSGNNF  
Sbjct: 811 QFLDLRNCNLSDDF-----------------------FPIALPCFANVKELDLSGNNFTV 847

Query: 696 LPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           +P  IK+   L  + L     L+ +  +P  LKY +  +C  L S
Sbjct: 848 IPECIKECRFLTVLCLNYCERLREIRGIPPNLKYFYAEECLSLTS 892


>gi|10121908|gb|AAG13418.1|AC000348_15 T7N9.23 [Arabidopsis thaliana]
          Length = 1560

 Score =  305 bits (782), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 309/1102 (28%), Positives = 483/1102 (43%), Gaps = 182/1102 (16%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            +SS  VQ++G++GMGGIGKTTLAKA +++    FE   F+SD+R  S    GL  LQK +
Sbjct: 353  ESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFEQRAFISDIRERSSAENGLVTLQKTL 412

Query: 62   LSTTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            +        E+   +I     K  V   K+++VLDDV+ + Q+  L+GE   +GQG+ IV
Sbjct: 413  IKELFRLVPEIEDVSIGLEKIKANVHEKKIIVVLDDVDHIDQVHALVGETRWYGQGTLIV 472

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            +TTRD  +L K    ++  Y V  L   +A + F   + ++    ++L   S+ +V  + 
Sbjct: 473  ITTRDSEILSKLSVNQQ--YEVKCLTEPQALKLFSYHSLRKEEPTKNLLALSKKIVQISG 530

Query: 181  GNPLVLEVLGSSLCLKRKSH-WGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
              PL +EV GS L  K++   W      L+++ +++  ++ D+L++SF  L    K +FL
Sbjct: 531  LLPLAVEVFGSLLYDKKEEKDWQT---QLDKLKKTQPGNLQDVLELSFKSLDDEEKKVFL 587

Query: 240  DIACFFEGED--KDFVASILDD---SESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQ 293
            DIAC F   +  KD V  +L     +    L +L  KSLV I  N  L MHD +++MGRQ
Sbjct: 588  DIACLFLKMEIKKDEVVIVLKGCGLNAEAALSVLRQKSLVKILANDTLWMHDQIRDMGRQ 647

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS- 352
            +V +ES ++PG RSRLWD  EI  VL + KGT +I GI LD    K    DP A   +S 
Sbjct: 648  MVLKESREDPGLRSRLWDRGEIMTVLNNMKGTSSIRGIVLDFK--KKFARDPTADEIVSR 705

Query: 353  NLR---------------LFKFYV---PKFYEI----EKLPSMSTEEQLSYSKVQLPNGL 390
            NLR               L +F     PK  EI    E    M+    L  + V+L   L
Sbjct: 706  NLRNNPGIYSVFNYLKNKLVRFPAEEKPKSSEITIPVESFAPMTKLRLLQINNVELEGNL 765

Query: 391  DYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ-------------PWEGEK 437
              LP +L+++ W   PL  LP +F  + L  L+L  S + Q                  K
Sbjct: 766  KLLPSELKWIQWKGCPLENLPPDFLARQLSVLDLSESGIRQVQTLRNKMVSFLLSCSMGK 825

Query: 438  ACVPSSIQNFKY----------LSALSFKGCQSLRSFPS---------------NLHFVC 472
              V S I   K           L  +  +GC SL + P                 L    
Sbjct: 826  HIVLSQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKV 885

Query: 473  P---------VTINFSYCVNLIEF------------------------PQISGKVT---R 496
            P         + ++F  C  L EF                        P+  G +T    
Sbjct: 886  PKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKE 945

Query: 497  LYLGQSAIEEVPSSIECLTDLEVLDLRGCK----------------------RLKRISTS 534
            L L  +AI+ +P SI  L +LE+L LRGCK                       LK + +S
Sbjct: 946  LLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSS 1005

Query: 535  FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
               L++L  L L+ C +L   P+ + +++ LK+++ + + + ELP    +LP L      
Sbjct: 1006 IGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAG 1065

Query: 595  DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
            DC  L  +P +IG L  L  +  +++ I  LP  +   + +R L+  +CK L+  P++ +
Sbjct: 1066 DCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKS-I 1124

Query: 655  LGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHL-- 711
              +  +  L++    + E+P+E   L  L  L +S     + LP     +  L  +++  
Sbjct: 1125 GDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE 1184

Query: 712  -------EDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP------------FCLESLD 752
                   E F  L +L  L +  K L  I    +      P              LE LD
Sbjct: 1185 TLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELD 1244

Query: 753  LTGCNMLRSLP---ELPLCLQYLNLEDCNMLRSLPELPL---CLQLLTVRNCNRLQSLPE 806
                 +   +P   E   CL  LNL + N   SLP   +    LQ L++R+C  L+ LP 
Sbjct: 1245 ACSWRISGKIPDDLEKLSCLMKLNLGN-NYFHSLPSSLVKLSNLQELSLRDCRELKRLPP 1303

Query: 807  ILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLR 866
            +   L++L+ +    L   S DL     S  +       TNC K+          + L  
Sbjct: 1304 LPCKLEQLNLANCFSLESVS-DL-----SELTILTDLNLTNCAKVVDIPG----LEHLTA 1353

Query: 867  IRHMAIASLRLGYEMAINEKLSELRGSL---IVLPGSEIPDWFSNQSSGSSICIQLPPHS 923
            ++ + +      Y +A+ ++LS+    +   + LPG+ +PDWFS       +     P+ 
Sbjct: 1354 LKRLYMTGCNSNYSLAVKKRLSKASLKMMRNLSLPGNRVPDWFSQ----GPVTFSAQPNR 1409

Query: 924  SCRNLIGFAFCAVLDSKKVDSD 945
              R +I  A    L+ +  D D
Sbjct: 1410 ELRGVI-IAVVVALNDETEDDD 1430


>gi|357468653|ref|XP_003604611.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
 gi|355505666|gb|AES86808.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
          Length = 1116

 Score =  305 bits (782), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 208/594 (35%), Positives = 316/594 (53%), Gaps = 80/594 (13%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML- 62
           S+ V ++G+WGMGGIGKTT+AKAI+++   +F+G  F++++R   E   G  +LQ+Q++ 
Sbjct: 260 SNKVLLLGMWGMGGIGKTTIAKAIYNKIGRKFQGRSFLANIREVWEKDYGQVNLQEQLMY 319

Query: 63  -----STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
                +T+  + +E       +  K+R+   ++LIVLDDVN++ QL  L G    F  GS
Sbjct: 320 DIFKETTSKIQNIEAG----KYILKDRLCHKRVLIVLDDVNKLDQLNILCGSRKWFAPGS 375

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI++TTRDK +L + R +  K Y +  ++  E+ E F   AFK+    ED +  SR+VV 
Sbjct: 376 RIIITTRDKHILRRDRVD--KTYSMKEMDESESLELFSLHAFKQTSPTEDFSEISRNVVK 433

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KS 236
           Y+ G PL LEVLGS L  +    W  VL  L  I   ++H     LKIS++ L     KS
Sbjct: 434 YSGGLPLALEVLGSYLFDREILEWICVLEKLKIIPNDQVHKK---LKISYDGLNDDTEKS 490

Query: 237 IFLDIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSISG-NFLNMHDILQEMGR 292
           IFLDIACFF G D++ V  IL+     +++ + +L+++SLV++ G N L MHD+L++MGR
Sbjct: 491 IFLDIACFFIGMDRNDVIQILNGCGLFAEIGISVLVERSLVTVDGKNKLGMHDLLRDMGR 550

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           +I+R++S  EP +RSRLW  +++  VL  + GT  +EG+ L L          +AF  M 
Sbjct: 551 EIIREKSPMEPEERSRLWFHEDVLDVLSEHTGTKTVEGLTLKLPGRSAQRFSTKAFKKMK 610

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            LRL                      L  S  QL     YL +KLR+LHW+ +PL  +PS
Sbjct: 611 KLRL----------------------LQLSGAQLDGDFKYLSRKLRWLHWNGFPLTCIPS 648

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
            F+ +N+V + L  S V+  W+         +Q  + L  L+      L   P       
Sbjct: 649 KFRQRNIVSIELENSNVKLVWQ--------QMQRMEQLKILNLSHSHYLTQTP------- 693

Query: 473 PVTINFSYCVNLIEF-----PQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKR 527
               +FSY  NL        P++S              EV  +I  L  + +++L+ C  
Sbjct: 694 ----DFSYLPNLENLVLKDCPRLS--------------EVSHTIGHLKKVLLINLKDCIS 735

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
           L  +  +   L+SL TLIL GCL ++   E LE+ME L  + +D T IT++P S
Sbjct: 736 LCNLPRNIYTLKSLKTLILSGCLKIDKLEEDLEQMESLTTLMADNTGITKVPFS 789


>gi|105923139|gb|ABF81459.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1421

 Score =  305 bits (782), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 245/758 (32%), Positives = 375/758 (49%), Gaps = 115/758 (15%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            ++D V+IVGI GM GIGKTT+AK +F+Q  + FEGSCF+S++    +   GL  LQ Q+L
Sbjct: 398  ATDDVRIVGIHGMPGIGKTTIAKVVFNQLCYGFEGSCFLSNINETPKKLTGLVRLQTQLL 457

Query: 63   STTLSEKLEVAGPNIPHFTK----ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
               L  K +VA        K    ER+RR ++L V DDV    QL  L+GE   FG GSR
Sbjct: 458  RDIL--KQDVANFECVDRGKVLINERIRRKRVLFVADDVARQDQLNALMGERSWFGPGSR 515

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            +++TTRD  +L K      + Y++  L  +++ + F   AFK +   ED    S+ VV Y
Sbjct: 516  VIITTRDSNLLRK----ADQTYQIEELTRDQSLQLFSWHAFKHSKPAEDYIELSKDVVDY 571

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSI 237
              G PL LEV+G+ L  K +  W  V+  L RI     HDI   L+IS++ L    +++ 
Sbjct: 572  CGGLPLALEVMGACLYGKNRGGWKSVIDKLRRIPN---HDIQGKLRISYDSLDGEELRNA 628

Query: 238  FLDIACFFEGEDKDFVASILD-----DSESDVLDILIDKSLVSISG-NFLNMHDILQEMG 291
            FLDIACFF    K +VA +L      + E D L+ L  +SL+ ++    + MHD+L++MG
Sbjct: 629  FLDIACFFIDRKKRYVAKVLGARCGYNPEVD-LETLRGRSLIKVNAIGKITMHDLLRDMG 687

Query: 292  RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
            R++VR+ S KEPGKR+R+W+ ++   VL+  KGTD +EG+ LD+   +  +L  R+F  M
Sbjct: 688  REVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDVRASEAKSLSTRSFAKM 747

Query: 352  SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
              L L                      L  +   L      L K+L ++ W   PL+   
Sbjct: 748  KRLNL----------------------LQINGAHLTGSFKLLSKELMWICWLQCPLKYFS 785

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
            S+F   NL  L+++ S +++ W+G+           K L+ L                  
Sbjct: 786  SDFTLDNLAVLDMQYSNLKELWKGQ-----------KILNRLKI---------------- 818

Query: 472  CPVTINFSYCVNLIEFPQI-SGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
                +N ++  NLI+ P + S  + +L L G S++ EV  SIE LT L  L+L GC  LK
Sbjct: 819  ----LNLNHSKNLIKTPNLHSSSLEKLKLKGCSSLVEVHQSIENLTSLVFLNLEGCWNLK 874

Query: 530  RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
             +  S   ++SL TL + GC  LE  PE +  ME L  + +D           EN     
Sbjct: 875  ILPESIGNVKSLETLNISGCSQLEKLPECMGDMESLTELLAD---------GIEN----- 920

Query: 590  VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
                      +    +IG L+++   L+     S  PSS        SL+S+     + +
Sbjct: 921  ----------EQFLTSIGQLKHVRR-LSLCGYSSAPPSS--------SLNSAGVLNWKQW 961

Query: 650  -PRTFLLGLSAMGLLHISDYAVREIPQ---EIAYLSSLEILYLSGNNFESLPAIIKQMSQ 705
             P +F  G   +  L +S+  + +      + + LS+LE+L L+ N F SLP+ I  + +
Sbjct: 962  LPTSF--GWRLVNHLELSNGGLSDRTTNCVDFSGLSALEVLDLTRNKFSSLPSGIGFLPK 1019

Query: 706  LRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPV 743
            LR + +     L S+ +LP  L  L    CK L+ + +
Sbjct: 1020 LRRLFVLACEYLVSILDLPSSLDCLVASHCKSLKRVRI 1057


>gi|42568255|ref|NP_198990.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|42570590|ref|NP_851117.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|8843884|dbj|BAA97410.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007337|gb|AED94720.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007338|gb|AED94721.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1068

 Score =  305 bits (782), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 211/637 (33%), Positives = 335/637 (52%), Gaps = 87/637 (13%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-----LQ 58
           SD V+++GIWG  GIGKTT+A+ +F++ S  F   CF+ +++G+    GG EH     LQ
Sbjct: 204 SDEVKMIGIWGPAGIGKTTIARTLFNKISSIFPFKCFMENLKGS--IKGGAEHYSKLSLQ 261

Query: 59  KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           KQ+LS  L ++       I H    K+ +   K+LI+LDDV+++ QL+ L  +   FG G
Sbjct: 262 KQLLSEILKQE----NMKIHHLGTIKQWLHDQKVLIILDDVDDLEQLEVLAEDPSWFGSG 317

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI+VTT DK +L+  R ++  IY V+    EEA E  C  AFK++  P+     +  V 
Sbjct: 318 SRIIVTTEDKNILKAHRIQD--IYHVDFPSEEEALEILCLSAFKQSSIPDGFEELANKVA 375

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
                 PL L V+G+SL  K K+ W ++L   +RI  S   +I +IL+I +++L+   +S
Sbjct: 376 ELCGNLPLGLCVVGASLRRKSKNEWERLL---SRIESSLDKNIDNILRIGYDRLSTEDQS 432

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDVLD---ILIDKSLVSIS--GNFLNMHDILQEMG 291
           +FL IACFF  E  D++ ++L D + DV++   IL D+SLV IS  G+ +  H +LQ++G
Sbjct: 433 LFLHIACFFNNEKVDYLTALLADRKLDVVNGFNILADRSLVRISTDGHVVMHHYLLQKLG 492

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IV ++   EPGKR  L + +EI  VL    GT++++GI  D S I+ +++   AF  M
Sbjct: 493 RRIVHEQWPNEPGKRQFLIEAEEIRDVLTKGTGTESVKGISFDTSNIEEVSVGKGAFEGM 552

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NL+  + Y   F               S   +Q+P  ++Y+P  +R LHW  YP ++LP
Sbjct: 553 RNLQFLRIYRDSFN--------------SEGTLQIPEDMEYIP-PVRLLHWQNYPRKSLP 597

Query: 412 SNFKPKNLVELNLRCSKVEQPWEG------------------------EKAC-------- 439
             F P++LV++ +  SK+++ W G                         KA         
Sbjct: 598 QRFNPEHLVKIRMPSSKLKKLWGGIQPLPNLKSIDMSFSYSLKEIPNLSKATNLEILSLE 657

Query: 440 -------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
                  +P SI N   L  L+ + C  L+  P+N++      ++ + C  L  FP IS 
Sbjct: 658 FCKSLVELPFSILNLHKLEILNVENCSMLKVIPTNINLASLERLDMTGCSELRTFPDISS 717

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
            + +L LG + IE+VP S+ C + L+ L + G + LKR+    C     +T ++L   N+
Sbjct: 718 NIKKLNLGDTMIEDVPPSVGCWSRLDHLYI-GSRSLKRLHVPPC-----ITSLVLWKSNI 771

Query: 553 EHFPEILEKMEHLKRIYSDR----TPITELPSSFENL 585
           E  PE +  +  L  +  +       I  LPSS ++L
Sbjct: 772 ESIPESIIGLTRLDWLNVNSCRKLKSILGLPSSLQDL 808



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 179/457 (39%), Gaps = 119/457 (26%)

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
           RSLV +   G + + H+  +L+K+   +RI  ++ P         N PG     +E    
Sbjct: 470 RSLVRISTDGHVVMHHY--LLQKLG--RRIVHEQWP---------NEPGKRQFLIEAEEI 516

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSL-------DSSHCKGLESFPR 651
            D L    G+ E +  I    S I ++         +R+L       DS + +G    P 
Sbjct: 517 RDVLTKGTGT-ESVKGISFDTSNIEEVSVGKGAFEGMRNLQFLRIYRDSFNSEGTLQIPE 575

Query: 652 TFLLGLSAMGLLHISDYAVREIPQEI--AYL-------SSLEILYLSGNNFESLPAI--- 699
                +  + LLH  +Y  + +PQ     +L       S L+ L+       +L +I   
Sbjct: 576 DMEY-IPPVRLLHWQNYPRKSLPQRFNPEHLVKIRMPSSKLKKLWGGIQPLPNLKSIDMS 634

Query: 700 -------IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID------CKMLQSLP--VL 744
                  I  +S+   + +      +SL ELP  +  LH ++      C ML+ +P  + 
Sbjct: 635 FSYSLKEIPNLSKATNLEILSLEFCKSLVELPFSILNLHKLEILNVENCSMLKVIPTNIN 694

Query: 745 PFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLP-------------------- 784
              LE LD+TGC+ LR+ P++   ++ LNL D  M+  +P                    
Sbjct: 695 LASLERLDMTGCSELRTFPDISSNIKKLNLGD-TMIEDVPPSVGCWSRLDHLYIGSRSLK 753

Query: 785 --ELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKS---- 838
              +P C+  L +   N ++S+PE ++ L  LD   +    K    L   P SL+     
Sbjct: 754 RLHVPPCITSLVLWKSN-IESIPESIIGLTRLDWLNVNSCRKLKSILG-LPSSLQDLDAN 811

Query: 839 -----AAICF---------EFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAIN 884
                  +CF          F NCL L+ +A   I+  S+ R                  
Sbjct: 812 DCVSLKRVCFSFHNPIRALSFNNCLNLDEEARKGIIQQSVYR------------------ 853

Query: 885 EKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
                     I LPG +IP+ F+++++G SI I L P
Sbjct: 854 ---------YICLPGKKIPEEFTHKATGRSITIPLSP 881


>gi|297850938|ref|XP_002893350.1| hypothetical protein ARALYDRAFT_313276 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297339192|gb|EFH69609.1| hypothetical protein ARALYDRAFT_313276 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1541

 Score =  305 bits (781), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 298/1098 (27%), Positives = 484/1098 (44%), Gaps = 200/1098 (18%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            ++SS  V+++G++GMGGIGKTTL+KA +++    F+   F+SD+R  S    GL  LQK 
Sbjct: 365  IESSSGVKVLGLYGMGGIGKTTLSKAFYNKVVGNFKQRAFISDIRERSSAENGLVTLQK- 423

Query: 61   MLSTTLSEKLEVAGPNIPHFT------KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
                TL ++L    P I   +      KE V   K+++VLDDV+ + Q+  L+GE   +G
Sbjct: 424  ----TLIKELFRLVPEIEDVSRGLEKIKENVHEKKIIVVLDDVDHIDQVNALVGETRWYG 479

Query: 115  QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            QG+ IV+TTRD  +L K    ++  Y V  L   ++ + F   + ++   P++L   S  
Sbjct: 480  QGTLIVITTRDSEILSKLSVNQQ--YEVKCLTEPQSLKLFSYHSLRKEKPPKNLLKLSTE 537

Query: 175  VVSYTKGNPLVLEVLGSSLCLKRKSH-WGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            +V  +   PL +EV GS L  K++   W      L ++ +++ H++ D+L +SF  L   
Sbjct: 538  IVRISGLLPLAVEVFGSLLYDKKEEKDWQT---QLGKLKKTQPHNLQDVLALSFESLDDE 594

Query: 234  VKSIFLDIACFFEGED--KDFVASILDD---SESDVLDILIDKSLVSI-SGNFLNMHDIL 287
             K +FLDIAC F   +  K  V  IL     +    L +L  KSLV I + + L MHD +
Sbjct: 595  EKKVFLDIACLFLKMEIKKVEVVIILKGCGLNAEAALSVLRQKSLVKILADDTLWMHDQI 654

Query: 288  QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK--IKGINLDP 345
            ++MGRQ+V +ES + PG RSRLWD  EI  VL + KGT +I GI LD  K  ++    D 
Sbjct: 655  RDMGRQMVLKESGENPGMRSRLWDRGEIMTVLNNVKGTSSIRGIVLDFKKKFVRDPTADE 714

Query: 346  RAFTNMSNL----RLFKFYVPKFYE---------------IEKLPSMSTEEQLSYSKVQL 386
             A  N++N      +F +   KF                 +E    M+    L  + V+L
Sbjct: 715  IASMNLTNNLGINSVFSYLKSKFVRFPAEEKTKSSEITIPVESFVPMTELRLLQINNVEL 774

Query: 387  PNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNL-----------RCSKVEQPWEG 435
               L  LP +L+++ W   PL  LP +F  + L  L+L           R ++V++  + 
Sbjct: 775  EGNLKLLPSELKWIQWKGCPLENLPPDFLARQLSVLDLSESGIRRVQTLRSNRVDENLKV 834

Query: 436  E--KAC----------------------------VPSSIQNFKYLSALSFKGCQSLRSFP 465
               + C                            VP S+ N + L  L F  C  L  F 
Sbjct: 835  LILRGCHSLEAIPDLSNHEALEMLVFEQCTLLVKVPKSVGNLRKLLHLDFSRCSKLSEFL 894

Query: 466  SNLHFVCPVTINF-SYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIECLTDLEVLD 521
            +++  +  +   F S C +L   P+  G +T    L L  +AI+ +P SI  L +LE+L 
Sbjct: 895  ADVSGLKRLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKYLPESINRLQNLEILS 954

Query: 522  LRGCK-----------------------RLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
            L GC+                        LK + +S   L+ L  L L+ C +L   P+ 
Sbjct: 955  LSGCRYIPELPLCIGTLKSLEKLYLNDTALKNLPSSIGDLKKLQDLHLVRCTSLSKIPDS 1014

Query: 559  LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
            + ++  LK+++   + + ELP    +LP L       C  L  +P +IG L  L  +   
Sbjct: 1015 INELISLKKLFITGSAVEELPLKPSSLPSLTDFSAGGCKFLKQVPSSIGGLNSLLQLQLN 1074

Query: 619  ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIA 678
             + I  LP  +   + +R L+  +C+ L+  P++ +  +  +  L++    + E+P+E  
Sbjct: 1075 TTLIEALPKEIGALHFIRKLELMNCEFLKFLPKS-IGDMDTLCSLNLEGSNIEELPEEFG 1133

Query: 679  YLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHL---------EDFNMLQSLPELPLC-- 726
             L +L  L +S     + LP     +  L  +++         E F  L  L  L +   
Sbjct: 1134 KLENLVELRMSNCTMLKRLPESFGDLKSLHHLYMKETLVSELPESFGNLSKLMVLEMLKN 1193

Query: 727  ----------------------------LKYLHLIDCKMLQSLPVLPFCLESLDLT---- 754
                                        L  L  +D +  +    +P  LE L       
Sbjct: 1194 PLFRISESNAPGTSEEPRFVEVPNSFSNLTSLEELDARSWRISGKIPDDLEKLSSLMKLN 1253

Query: 755  -GCNMLRSLPELPLCL---QYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
             G N   SLP   + L   Q L+L DC  L+ LP LP  L+ L + NC  L+S+ +    
Sbjct: 1254 LGNNYFHSLPSSLVGLSNLQELSLRDCRELKRLPPLPCKLEHLNMANCFSLESVSD---- 1309

Query: 811  LQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHM 870
            L EL  ++LE L+                      TNC    GK  +    + L+ ++ +
Sbjct: 1310 LSEL--TILEDLN---------------------LTNC----GKVVDIPGLEHLMALKRL 1342

Query: 871  AIASLRLGYEMAINEKLSELRGSL---IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRN 927
             +      Y +A+ ++LS+    +   + LPG+ +PDW S       +     P+   R 
Sbjct: 1343 YMTGCNSNYSLAVKKRLSKASLKMLRNLSLPGNRVPDWLSQ----GPVTFSAQPNKELRG 1398

Query: 928  LIGFAFCAVLDSKKVDSD 945
            +I  A    L+++  D D
Sbjct: 1399 VI-IAVVVALNNETEDDD 1415


>gi|351723127|ref|NP_001236756.1| candidate disease-resistance protein SR1 [Glycine max]
 gi|37780302|gb|AAO92748.1| candidate disease-resistance protein SR1 [Glycine max]
          Length = 1137

 Score =  305 bits (781), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 251/764 (32%), Positives = 362/764 (47%), Gaps = 113/764 (14%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V I+GI GMGG+GKTTLA A+++  +  F+ SCF+ +VR  S     L+HLQ  
Sbjct: 204 VGSDDVVHIIGIHGMGGLGKTTLAVAVYNLIAPHFDESCFLQNVREES----NLKHLQSS 259

Query: 61  MLSTTLSEK--LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS  L EK     +        + R+RR K+L++LDDV++  QLK ++G+ D FG GSR
Sbjct: 260 LLSKLLGEKDITLTSWQEGASMIQHRLRRKKVLLILDDVDKREQLKAIVGKPDWFGPGSR 319

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRDK +L+    E ++ Y V  L    A       AFK        +     VV+Y
Sbjct: 320 VIITTRDKHLLKYH--EVERTYEVKVLNHNAALHLLTWNAFKREKIDPIYDDVLNRVVTY 377

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+GS+L  K  + W   L    RI  +EI     IL++SF+ L    +++F
Sbjct: 378 ASGLPLALEVIGSNLYGKTVAEWESALETYKRIPSNEI---LKILQVSFDALEEEQQNVF 434

Query: 239 LDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISGN---FLNMHDILQEMG 291
           LDIAC F+G    E  D   ++  + +   + +L++KSL+  + N    + MH+++Q+MG
Sbjct: 435 LDIACCFKGHEWTEVDDIFRALYGNGKKYHIGVLVEKSLIKYNRNNRGTVQMHNLIQDMG 494

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS---KIKGINLDPRAF 348
           R+I RQ S +EPGKR RLW PK+I +VLKHN GT  IE I LD S   K + +  +  AF
Sbjct: 495 REIERQRSPEEPGKRKRLWSPKDIIQVLKHNTGTSKIEIICLDSSISDKEETVEWNENAF 554

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M NL++      KF                        G +Y+P+ LR L W  YP  
Sbjct: 555 MKMENLKILIIRNGKF----------------------SIGPNYIPEGLRVLEWHRYPSN 592

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            LPSNF P NLV   L  S +             S +   +L+ L+F  C+ L   P   
Sbjct: 593 CLPSNFDPINLVICKLPDSSITS------FEFHGSSKKLGHLTVLNFDKCKFLTQIPDVS 646

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
                  ++F  C +L+                     V  S+  L  L+ L   GC++L
Sbjct: 647 DLPNLKELSFRKCESLV--------------------AVDDSVGFLNKLKKLSAYGCRKL 686

Query: 529 KRISTSF--CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLP 586
               TSF    L SL  L + GC +LE+FPEIL +M  ++ +     PI ELP SF+NL 
Sbjct: 687 ----TSFPPLNLTSLRRLQISGCSSLEYFPEILGEMVKIRVLELHDLPIKELPFSFQNLI 742

Query: 587 GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK-- 644
           GL  L++  C                         I QL  S+A+ + L      +C   
Sbjct: 743 GLSRLYLRRCR------------------------IVQLRCSLAMMSKLSVFRIENCNKW 778

Query: 645 -GLESFPRTFLLG-------LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL 696
             +ES      +G        SA       D+ +    +     + +  L LSGNNF  L
Sbjct: 779 HWVESEEGEETVGALWWRPEFSAKNCNLCDDFFLTGFKR----FAHVGYLNLSGNNFTIL 834

Query: 697 PAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           P   K++  LR + + D   LQ +  LP  LK    I+C  L S
Sbjct: 835 PEFFKELKFLRTLDVSDCEHLQKIRGLPPNLKDFRAINCASLTS 878



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 142/364 (39%), Gaps = 90/364 (24%)

Query: 577 ELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALSNM 634
           E   S + L  L VL  + C  L  +PD  ++ +L+ L +      ++  +  SV   N 
Sbjct: 617 EFHGSSKKLGHLTVLNFDKCKFLTQIPDVSDLPNLKELSF--RKCESLVAVDDSVGFLNK 674

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNF 693
           L+ L +  C+ L SFP                             L+SL  L +SG ++ 
Sbjct: 675 LKKLSAYGCRKLTSFPPL--------------------------NLTSLRRLQISGCSSL 708

Query: 694 ESLPAIIKQMSQLRFIHLEDFNMLQSLPELP------LCLKYLHLIDCKMLQ---SLPVL 744
           E  P I+ +M ++R + L D      + ELP      + L  L+L  C+++Q   SL ++
Sbjct: 709 EYFPEILGEMVKIRVLELHDL----PIKELPFSFQNLIGLSRLYLRRCRIVQLRCSLAMM 764

Query: 745 PFCLESLDLTGCNMLRSLP-----ELPLCLQY---LNLEDCNM-----LRSLPELPLCLQ 791
              L    +  CN    +      E    L +    + ++CN+     L           
Sbjct: 765 S-KLSVFRIENCNKWHWVESEEGEETVGALWWRPEFSAKNCNLCDDFFLTGFKRFAHVGY 823

Query: 792 L-LTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLK 850
           L L+  N   L    + L  L+ LD S  E L K    ++  P +LK     F   NC  
Sbjct: 824 LNLSGNNFTILPEFFKELKFLRTLDVSDCEHLQK----IRGLPPNLKD----FRAINCAS 875

Query: 851 LNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQS 910
           L   + +                       M +N++L E  G+  + PG+ IP+WF+ QS
Sbjct: 876 LTSSSKS-----------------------MLLNQELYEAGGTKFMFPGTRIPEWFNQQS 912

Query: 911 SGSS 914
           SG S
Sbjct: 913 SGHS 916


>gi|240256307|ref|NP_197336.4| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005159|gb|AED92542.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1245

 Score =  305 bits (781), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 309/1072 (28%), Positives = 479/1072 (44%), Gaps = 171/1072 (15%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVR----GNSETAGGLEH--- 56
            S  V+++GI G  GIGKTT+A+A+ DQ S  F+ + F+ D+R           GL+    
Sbjct: 211  SGDVRMIGIVGPPGIGKTTIARALRDQISENFQLTAFIDDIRLTYPRRCYGESGLKPPTA 270

Query: 57   ----------LQKQMLSTTLSEKLEVAGPNI---PHFTKERVRRMKLLIVLDDVNEVGQL 103
                      LQ   LS  L++K ++   N+   P++ K+R    K+L++LDDV+ + QL
Sbjct: 271  FMNDDRRKIVLQTNFLSEILNQK-DIVIHNLNAAPNWLKDR----KVLVILDDVDHLEQL 325

Query: 104  KRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENH 163
              +  E   FG GSRI++TT+D+++L+    +   IY V     ++A + FC  AF +N 
Sbjct: 326  DAMAKETGWFGYGSRIIITTQDRKLLKAHNID--YIYEVGLPRKDDALQIFCLSAFGQNF 383

Query: 164  CPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDIL 223
              +D  + +  V       PL L+VLGS L       W   L  L    +    DI   L
Sbjct: 384  PHDDFQYLACEVTQLAGELPLGLKVLGSYLKGMSLEEWKNALPRLKTCLDG---DIEKTL 440

Query: 224  KISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF 280
            + S++ L+ + +++FL IAC F G +   V   L  S+ DV   LD+L  KSL+SI   F
Sbjct: 441  RYSYDALSRKDQALFLHIACLFRGYEVGHVKQWLGKSDLDVDHGLDVLRQKSLISIDMGF 500

Query: 281  LNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHN-KGTDAIEGIFLDLSKIK 339
            LNMH +LQ++G +IVR +S +EP +R  L D  +IS V  +N  GT +I GI L++ +I+
Sbjct: 501  LNMHSLLQQLGVEIVRNQSSQEPRERQFLVDVNDISDVFTYNTAGTKSILGIRLNVPEIE 560

Query: 340  -GINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLR 398
              I +D   F  M+NL+ F F    F +                K+ LP GL+ LP KLR
Sbjct: 561  EKIVIDELVFDGMTNLQ-FLFVNEGFGD----------------KLSLPRGLNCLPGKLR 603

Query: 399  YLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGC 458
             LHW+  PLR  PS F    LVEL +R +  E+ WE         I   K L  +     
Sbjct: 604  VLHWNYCPLRLWPSKFSANFLVELVMRGNNFEKLWE--------KILPLKSLKRMDLSHS 655

Query: 459  QSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT---RLYLGQ-SAIEEVPSSIECL 514
            + L+  P   +      ++ S C  L+E     GK T   RL L   S ++++PSSI   
Sbjct: 656  KDLKEIPDLSNATNLEELDLSSCSGLLELTDSIGKATNLKRLKLACCSLLKKLPSSIGDA 715

Query: 515  TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTP 574
            T+L+VLDL  C+  + +  S  KL +L  L L+ C  L   P           I + + P
Sbjct: 716  TNLQVLDLFHCESFEELPKSIGKLTNLKVLELMRCYKLVTLP---------NSIKTPKLP 766

Query: 575  ITELPSSFENLPGLEVLF-VEDCSKLDNLPD---NIGSLEYLYYILAAASAISQLPSSVA 630
            +  + S  E+L        +EDC++L   P+   N+  L+         +AI  +PSS+ 
Sbjct: 767  VLSM-SECEDLQAFPTYINLEDCTQLKMFPEISTNVKELDL------RNTAIENVPSSIC 819

Query: 631  LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
              + L  LD S C+ L+ FP   +    ++  L +S   + E+P  I  L  L  L + G
Sbjct: 820  SWSCLYRLDMSECRNLKEFPNVPV----SIVELDLSKTEIEEVPSWIENLLLLRTLTMVG 875

Query: 691  NNFESLPAIIKQMSQLRFIHLEDFNMLQS-----LPELPLCLKYLHLIDCKM---LQSLP 742
               + L  I   +S+L+  +LED  +               +++    D  +    Q   
Sbjct: 876  --CKRLNIISPNISKLK--NLEDLELFTDGVSGDAASFYAFVEFSDRHDWTLESDFQVHY 931

Query: 743  VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLT---VRNCN 799
            +LP CL              P++ + L++ + +      ++P+   CL  L+   V  C 
Sbjct: 932  ILPICL--------------PKMAISLRFWSYD----FETIPDCINCLPGLSELDVSGCR 973

Query: 800  RLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKI 859
             L SLP++   L  LDA+  E L + +   Q  PE      IC  F NC+ LN +A   I
Sbjct: 974  NLVSLPQLPGSLLSLDANNCESLERINGSFQ-NPE------ICLNFANCINLNQEARKLI 1026

Query: 860  LADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
               +                E AI             LPG+E+P  F++Q +  S+ I +
Sbjct: 1027 QTSAC---------------EYAI-------------LPGAEVPAHFTDQDTSGSLTINI 1058

Query: 920  PPHSSCRNLIGFAFCAVLDSKKV---DSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSR 976
               +    L  +  C +L    +   D D   +  VS     +   L     V  GY   
Sbjct: 1059 TTKTLPSRL-RYKACILLSKGNINLEDEDEDSFMSVSCHVTGKQNILILPSPVLRGYTDH 1117

Query: 977  YIEDLIDSDRVILGFKPCLNVGFPDGYHHTIA--TFKFFAERKFYKIKRCGL 1026
                       I  +   L+  FP+    T +   F F    K + +K CG+
Sbjct: 1118 L---------YIFDYSFSLHEDFPEAKEATFSELMFDFIVHTKSWNVKSCGV 1160


>gi|357462143|ref|XP_003601353.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355490401|gb|AES71604.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1133

 Score =  305 bits (781), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 232/713 (32%), Positives = 365/713 (51%), Gaps = 81/713 (11%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S+ V+ +G+WGMGGIGKTTLAK ++ +   +F+  C + +V   S T  GL+ ++ Q+ 
Sbjct: 276 GSNDVRGLGLWGMGGIGKTTLAKHLYSKLCSQFDHHCLLENVSEES-TRCGLKGVRNQLF 334

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRM---KLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           S  L  +L    PN+   T   +RR+   K LIVLDDV  + Q + L    +  G GSR+
Sbjct: 335 SKLL--ELRPDAPNLE--TTISMRRLVCKKSLIVLDDVATLEQAENLNIVNNCLGPGSRV 390

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           +VTTRDK+V  +F   +  IY V  L  +E+ E FC  AF+E +        S+  + Y 
Sbjct: 391 IVTTRDKQVCSQFN--KCAIYEVKRLNKDESLEVFCLEAFREKYPKIGYGDLSKRAIGYC 448

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            GNPL L+VLG++   K K  W   L  L +I    IHD+   LK+SF+ L    + IFL
Sbjct: 449 GGNPLGLKVLGTNFRTKSKEVWESELEKLKKIPNRRIHDV---LKLSFDGLDCTQQDIFL 505

Query: 240 DIACFF---EGEDKDFVASILDDSE---SDVLDILIDKSLVSIS-GNFLNMHDILQEMGR 292
           DI CFF   +  D+DF+ ++ D S       +++L +K+L+     N ++MHD+L EMGR
Sbjct: 506 DIVCFFFLGKYIDRDFLTTLSDASNFFAESGIEVLSNKALIVFRICNLIDMHDLLVEMGR 565

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           +IV+Q+S K PG RSRLWDP E+   LK+ KGT+ +E I  D+S+I+ + L   +F +M+
Sbjct: 566 EIVKQQSPKNPGSRSRLWDPMEVCDTLKYKKGTEVVEVIIFDISEIRDLYLTSDSFKSMT 625

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NLR    +            M   ++  +  V    GL++L  KLR+L+W  +PL +LPS
Sbjct: 626 NLRCLHIF----------NKMQLPDEGKHYNVHFLQGLEWLSDKLRHLYWVGFPLESLPS 675

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEK----------------------------------- 437
            F  + LV L +R SK+++ W+G +                                   
Sbjct: 676 TFSAEWLVRLEMRGSKLKKLWDGIQKLGNLKSIDLCYSKDLIEMPDLSRAPKLSLVSLDF 735

Query: 438 ----ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
               + +  SI     L AL  +GC+++ S  +N+       ++ + C +L+EF  +S K
Sbjct: 736 CESLSKLHPSILTAPKLEALLLRGCKNIESLKTNISSKSLRRLDLTDCSSLVEFSMMSEK 795

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEV----LDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
           +  L L Q+   E  S + C +  ++    L L  CK+L  I +       L+ L L+GC
Sbjct: 796 MEELSLIQTFKLECWSFMFCKSSGQIRPSCLSLSRCKKLNIIGSKLS--NDLMDLELVGC 853

Query: 550 --LNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNI 606
             +N  +   IL+++  L+ +  S  + +  LP + +N   L VL +++C KL +LP   
Sbjct: 854 PQINTSNLSLILDELRCLRELNLSSCSNLEALPENIQNNSKLAVLNLDECRKLKSLPKLP 913

Query: 607 GSLEYLYYILAAASAIS--QLPSSVALSNMLRSLDSSHCKGLES-FPRTFLLG 656
            SL  L  I      I   Q P    + + L ++D+   + L++ F  TFL G
Sbjct: 914 ASLTELRAINCTDLDIDSIQRPMLENILHKLHTIDNEGDRILDTNFGFTFLPG 966



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 145/619 (23%), Positives = 229/619 (36%), Gaps = 162/619 (26%)

Query: 449  YLSALSFKGCQSLRSFPSNLHFVCPVTI---NFSYCVNLIE-FPQISGKVTRLYLGQSAI 504
            YL++ SFK   +LR     LH    + +      Y V+ ++    +S K+  LY     +
Sbjct: 615  YLTSDSFKSMTNLRC----LHIFNKMQLPDEGKHYNVHFLQGLEWLSDKLRHLYWVGFPL 670

Query: 505  EEVPS--SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM 562
            E +PS  S E L  LE   +RG K LK++     KL +L ++ L    +L   P+ L + 
Sbjct: 671  ESLPSTFSAEWLVRLE---MRGSK-LKKLWDGIQKLGNLKSIDLCYSKDLIEMPD-LSRA 725

Query: 563  EHLKRIYSDRT-PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASA 621
              L  +  D    +++L  S    P LE L +  C  +++L  NI               
Sbjct: 726  PKLSLVSLDFCESLSKLHPSILTAPKLEALLLRGCKNIESLKTNIS-------------- 771

Query: 622  ISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLS 681
                      S  LR LD + C  L  F                       + +++  LS
Sbjct: 772  ----------SKSLRRLDLTDCSSLVEFSM---------------------MSEKMEELS 800

Query: 682  SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
             ++   L   +F       K   Q+R                P CL    L  CK L  +
Sbjct: 801  LIQTFKLECWSF----MFCKSSGQIR----------------PSCLS---LSRCKKLNII 837

Query: 742  -PVLPFCLESLDLTGC------NMLRSLPELPLCLQYLNLEDCNMLRSLPELPLC---LQ 791
               L   L  L+L GC      N+   L EL  CL+ LNL  C+ L +LPE       L 
Sbjct: 838  GSKLSNDLMDLELVGCPQINTSNLSLILDELR-CLRELNLSSCSNLEALPENIQNNSKLA 896

Query: 792  LLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKL 851
            +L +  C +L+SLP++   L EL A                              NC  L
Sbjct: 897  VLNLDECRKLKSLPKLPASLTELRA-----------------------------INCTDL 927

Query: 852  NGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSS 911
            +  +  + + +++L   H               +++ +       LPG  +PD F   + 
Sbjct: 928  DIDSIQRPMLENILHKLHTIDNE---------GDRILDTNFGFTFLPGDHVPDKFGFLTR 978

Query: 912  GSSICIQLPPHSSCRNLIGFAFCAVLDSKKVD------SDCFRYFYVSFQFD--LEIKTL 963
             SSI I L P      LI   FC +L  +  D       DCF+   + F +D  +  + L
Sbjct: 979  ESSIVIPLDPKCKLSALI---FCIILSGRYGDYYESVCCDCFQNGKIIFNWDQVVSAEML 1035

Query: 964  SETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFA------ERK 1017
            +E   +   +   +  + +D             +   +G H +I+  +F        E  
Sbjct: 1036 TEDHVLLSSFTEIWCFERLD-----------WTMNESEGDHCSISC-EFMCRANEAEEWS 1083

Query: 1018 FYKIKRCGLCPVYANPSET 1036
               IK CG+ PVY+  SE+
Sbjct: 1084 TDGIKGCGVLPVYSLESES 1102


>gi|163914237|dbj|BAF95888.1| N-like protein [Nicotiana tabacum]
          Length = 1165

 Score =  305 bits (780), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 239/730 (32%), Positives = 360/730 (49%), Gaps = 114/730 (15%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQF------SHEFEGSCFVSDVRGNSETAGGLEHLQ 58
           + V++VGI GMGG+GKTT+A+A+FD        S++F+G+CF+ D++   E  G +  LQ
Sbjct: 211 NDVRVVGICGMGGVGKTTIARAMFDTLLVRRDSSYQFDGACFLEDIK---ENKGRINSLQ 267

Query: 59  KQMLSTTLSEKLEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQ-LKRLIGELDQFGQG 116
             +LS  L EK E     +  H    R+R  K+LIVLDD+++    L+ L G+LD FG G
Sbjct: 268 NTLLSKLLREKAEYNNKEDGKHQMASRLRSKKVLIVLDDIDDKDHYLEYLAGDLDWFGNG 327

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI+VTTRDK ++EKF      I+ V  L   EA + F  +AF +    E     S  VV
Sbjct: 328 SRIIVTTRDKHLIEKF-----GIHLVTALTGHEAIQLFNQYAFGKEVSDEHFKKLSLEVV 382

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            Y KG PL L VLGSSL  +  + W   +  +     S+   I + LKIS++ L P  + 
Sbjct: 383 KYAKGLPLALRVLGSSLRNRGITVWKSAIEQMKNNPNSK---IVENLKISYDGLEPIQQE 439

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGR 292
           +FLDIACFF G++K  +  +L   +      LD+LI++SLV I+  + + MHD++QEMGR
Sbjct: 440 MFLDIACFFRGKEKGAIMQVLKSCDCGAEYGLDVLIERSLVFITKYSKIEMHDLIQEMGR 499

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
            IV    +K  G+ SRLW  K+   ++ +N GT A+E I+  +S    + +   A  NM 
Sbjct: 500 YIVNL--QKNLGECSRLWLTKDFEEMMINNTGTMAMEAIW--VSTYSTLRISNEAMKNMK 555

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            LR+   Y+  +       + S++     S +     ++YL   LR+     YP  +LPS
Sbjct: 556 RLRI--LYIDNW-------TWSSDG----SYITHDGSIEYLSNNLRWFVLPGYPRESLPS 602

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPS-------------------SIQNFKYLS-- 451
            F+PK LV L L  + +   W  E   +PS                    + N +YL   
Sbjct: 603 TFEPKMLVHLKLSGNSLRYLWM-ETKHLPSLRRIDLSRSKRLMRTPDFTGMPNLEYLDLT 661

Query: 452 -------------------ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
                               L    C+SL  FP  ++      +   YC +L +FP+I  
Sbjct: 662 WCSNLEEVHHSLGCCRKLIRLDLYNCKSLMRFPC-VNVESLEYLGLEYCDSLEKFPEIHR 720

Query: 493 KVT---RLYLGQSAIEEVPSS-IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG 548
           ++    ++++G S I E+PSS  +  T +  LDL G + L  + +S C+L+SLV L + G
Sbjct: 721 RMKPEIQIHMGDSGIRELPSSYFQYQTHITKLDLSGIRNLVALPSSICRLKSLVRLNVWG 780

Query: 549 CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF-------------------------- 582
           C  LE  PE +  +++L+ + +  T I+  PSS                           
Sbjct: 781 CPKLESLPEEIGDLDNLEELDAKCTLISRPPSSIVRLNKLKILSFSSFGYDGVHFEFPPV 840

Query: 583 -ENLPGLEVLFVEDCSKLD-NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS 640
            E L  LE L +  C+ +D  LP++IGSL  L  +    +    LP S+A    L+ LD 
Sbjct: 841 AEGLHSLEHLDLSYCNLIDGGLPEDIGSLSSLKELCLDGNNFEHLPRSIAQLGALQILDL 900

Query: 641 SHCKGLESFP 650
           S CK L   P
Sbjct: 901 SDCKRLTQLP 910


>gi|307135798|gb|ADN33677.1| TIR-LRR-NBS disease resistance protein [Cucumis melo subsp. melo]
          Length = 1139

 Score =  305 bits (780), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 256/794 (32%), Positives = 377/794 (47%), Gaps = 149/794 (18%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           + V +VG++G+GGIGKTTLAKA++++ + +FEGSCF+ DVR  + +  GL  LQK +L+ 
Sbjct: 85  EGVNMVGMYGIGGIGKTTLAKALYNKIATQFEGSCFLLDVRREA-SKHGLIQLQKTLLNE 143

Query: 65  TLSEKLEVA----GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            L E L+V     G NI    + R+   K+LIVLDDV+   QL+ L+GE D F QGS+I+
Sbjct: 144 ILKEDLKVVNCDKGINI---IRSRLCSKKVLIVLDDVDHRDQLEALVGERDWFCQGSKII 200

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           VTTR+K +L     +E  I+ + GL  ++A E F   AFK+NH   +    S  V SY K
Sbjct: 201 VTTRNKHLLSSHGFDE--IHNILGLNEDKAIELFSWHAFKKNHPSSNYFDLSERVTSYCK 258

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G+PL L VLGS LC + +  W  +L +      S   DI DIL++SF+ L  +VK IFLD
Sbjct: 259 GHPLALVVLGSFLCNRDQVEWCSILDEFE---NSLNKDIKDILQLSFDGLEDKVKDIFLD 315

Query: 241 IACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
           I+C   GE  ++V   L                                MG +IV  ES 
Sbjct: 316 ISCLLVGEKVEYVKDTLSAC----------------------------HMGHKIVCGES- 346

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
            E GKRSRLW  K++  V   N GT AI+ I L+      + +DP+AF N+ NLRL    
Sbjct: 347 LELGKRSRLWLEKDVLEVFSSNSGTSAIKAIKLEFHNPTRLIVDPQAFRNLKNLRLLIVR 406

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
             +F                         + YLP+ L+++ W  +   +LPS+F  KNLV
Sbjct: 407 NARFCA----------------------KIKYLPESLKWIEWHGFSQPSLPSHFIVKNLV 444

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
            L+L+ S ++    G +  V   +++                             +N SY
Sbjct: 445 GLDLQHSFIKDF--GNRLKVGEWLKH-----------------------------VNLSY 473

Query: 481 CVNLIEFPQISG--KVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
             +L + P  S    + +LYL   + +  +  SI CL  L +L L GC  +K++ TS  K
Sbjct: 474 STSLKKIPDFSAASNLEKLYLRDCTNLRTIHRSIFCLVKLTLLCLSGCCMIKKLPTSCFK 533

Query: 538 LRSLVTLILLGCLNLEHFPEILEKME----HLKRIYSDRT-------------------- 573
           L SL  L L GC  LE  P+    +     HL R  + RT                    
Sbjct: 534 LWSLKHLDLSGCTKLEKIPDFSSALNLEILHLSRCTNLRTIHNSVFSLHKLISLYLDFCS 593

Query: 574 PITELPSSFENLPGLEVLFVEDCSKLDNLPD-----------------------NIGSLE 610
            +  LP+S   L  L  L +  C KL+ +PD                       +IGSL+
Sbjct: 594 TLKTLPTSCFMLTSLNTLTLYSCQKLEEVPDLSSASNLNSLNVEKCTNLRGIHESIGSLD 653

Query: 611 YLYYILA-AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA 669
            L  +++   + + +LPS + L + L+ LD S C  LESFP      + ++  L +S  A
Sbjct: 654 RLQTLVSRKCTNLVKLPSILRLKS-LKHLDLSWCSKLESFP-IIDENMKSLRFLDLSFTA 711

Query: 670 VREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLK 728
           ++++P  I YL+ L  L L    +  SLP  I  +  L  + L +   LQ +P LP  ++
Sbjct: 712 IKDLPSSIGYLTELPRLNLGNCTSLISLPKTISLLMSLLDLELRNCRSLQEIPNLPQNIQ 771

Query: 729 YLHLIDCKMLQSLP 742
            L    C++L   P
Sbjct: 772 NLDAYGCELLTKSP 785


>gi|357499615|ref|XP_003620096.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495111|gb|AES76314.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1104

 Score =  304 bits (779), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 240/757 (31%), Positives = 377/757 (49%), Gaps = 101/757 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S+  V ++GI+G GG+GKTTLA+A+++  + +F+  CF+ DVR NS T  GLEHLQ++
Sbjct: 216 VGSTGVVHMLGIYGTGGMGKTTLARAVYNSIADQFDCLCFLHDVRENS-TKYGLEHLQEK 274

Query: 61  MLSTTLSEKLEVAGPN--IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS  +   +E+   N  IP   K+R+ R K+L++LDDV+E+ QL+ L G LD FG GSR
Sbjct: 275 LLSKLVELDIELGDINEGIP-IIKKRLHRNKVLLILDDVHELKQLQVLAGGLDWFGPGSR 333

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           ++VTTRD+ +L K  G E+  Y +  L   EA E     +FK N    + +   R  V+Y
Sbjct: 334 VIVTTRDRHLL-KSHGIERA-YELPKLNETEALELLRWNSFKNNKVDSNFDGVLRCAVTY 391

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+GS+L       W   L    RI    I  I +ILK+SF+ L    +++F
Sbjct: 392 ASGLPLALEVVGSNLFGNNIGEWKSALDRYRRI---PIKKIQEILKVSFDALEKDEQNVF 448

Query: 239 LDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSIS---GNFL-NMHDILQEM 290
           LDIAC F+G    E +D + +   +     + +L +KSL+ I+   GN++  +H ++++M
Sbjct: 449 LDIACCFKGYNLKELEDILYAHYGNCMKYQISVLDEKSLIKINRYEGNYVVTLHFLIEKM 508

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
           G++IV ++S  EPG+ SRLW  K+I  VL+ N+G+  IE I+L+    +   +D      
Sbjct: 509 GKEIVNEKSPNEPGRHSRLWFHKDIIDVLEENQGSSEIEIIYLEFPSSEEEVVD------ 562

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
                         +E ++L  M   + L        NG  YLP  LR L W  YP   +
Sbjct: 563 --------------WEGDELKKMENLKTLIVKNGTFSNGPKYLPNSLRVLEWPKYPSPVI 608

Query: 411 PSNFKPKNLVELNLRCSK-VEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLH 469
           PS+F PK L    L+ S  +   + G       +++ F  +  L+   CQ L       +
Sbjct: 609 PSDFCPKKLSICKLQQSDFISFGFHG-------TMKRFGNVRELNLDDCQYLTRIHDVSN 661

Query: 470 FVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
                  +F +C NLIE                    +  S+  L  L++L+   C +L+
Sbjct: 662 LPNLEIFSFQFCKNLIE--------------------IHESVGFLNKLQILNAVNCSKLR 701

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
             S    K  SL  L L  C +L+ FPEIL +M+++  I   +T I +LP SF+NL GL+
Sbjct: 702 --SFPAMKSASLRRLGLAYCTSLKTFPEILGEMKNITHISLMKTSIDKLPVSFQNLTGLQ 759

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
           + F+E                         + + +LPSS+     L  +    C     F
Sbjct: 760 IFFIE------------------------GNVVQRLPSSIFRMPNLSKITFYRC----IF 791

Query: 650 PR-----TFLLGLSAMGLLHIS-DYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
           P+     + ++  S   +  +  + +   +P  + + +++E L LS NNF  LP  IK  
Sbjct: 792 PKLDDKWSSMVSTSPTDIQLVKCNLSDEFLPIVVMWSANVEFLNLSENNFTILPECIKDC 851

Query: 704 SQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
             L  + L+D   L+ +  +P  LK+L  I CK L S
Sbjct: 852 RFLWSLRLDDCKCLREIRGIPPNLKHLSAIRCKSLTS 888



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 137/318 (43%), Gaps = 48/318 (15%)

Query: 584 NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA-ASAISQLPSSVALSNMLRSLDSSH 642
           NLP LE+   + C  L  + +++G L  L  + A   S +   P+  + S  LR L  ++
Sbjct: 661 NLPNLEIFSFQFCKNLIEIHESVGFLNKLQILNAVNCSKLRSFPAMKSAS--LRRLGLAY 718

Query: 643 CKGLESFPRTFLLGLSAMGLLHIS--DYAVREIPQEIAYLSSLEILYLSGNNFESLPAII 700
           C  L++FP   +LG     + HIS    ++ ++P     L+ L+I ++ GN  + LP+ I
Sbjct: 719 CTSLKTFPE--ILG-EMKNITHISLMKTSIDKLPVSFQNLTGLQIFFIEGNVVQRLPSSI 775

Query: 701 KQMSQLR--------FIHLED--FNMLQSLPELPLCLKYLHLIDCKMLQS-LPVLPFC-- 747
            +M  L         F  L+D   +M+ + P        + L+ C +    LP++     
Sbjct: 776 FRMPNLSKITFYRCIFPKLDDKWSSMVSTSP------TDIQLVKCNLSDEFLPIVVMWSA 829

Query: 748 -LESLDLTGCNMLRSLPE-LPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQS 803
            +E L+L+  N    LPE +  C  L  L L+DC  LR +  +P  L+ L+   C  L S
Sbjct: 830 NVEFLNLSE-NNFTILPECIKDCRFLWSLRLDDCKCLREIRGIPPNLKHLSAIRCKSLTS 888

Query: 804 LPEILLCLQELDASVLEKLS----KHSPDL-----------QWAPESLKSAAICFEFTNC 848
             + +L  QEL  +   K         PD             W    L S A+CF   + 
Sbjct: 889 SCKNMLLNQELHEAGGTKFCFSGFARIPDWFDHQSMGHTISFWFRNKLPSMALCFSTKSA 948

Query: 849 LKL-NGKANNKILADSLL 865
             +  GK N  I   +L 
Sbjct: 949 ATMPTGKTNFYITIPTLF 966


>gi|225460020|ref|XP_002269704.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1156

 Score =  304 bits (779), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 250/744 (33%), Positives = 391/744 (52%), Gaps = 69/744 (9%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V++VGI+G+GGIGKTT+AK +++    +F G+ F+  V+  S+       L +++L  
Sbjct: 211 DDVRMVGIYGIGGIGKTTIAKMVYNDILCQFNGASFLEGVKNRSKCYNDQLQLLQELLHG 270

Query: 65  TLSE---KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
            +     KLE     + +  K R+   K+L+V DDV+++ Q++ ++     FG GSRI++
Sbjct: 271 IMEGGHLKLESINDGM-NMIKGRLGSKKVLVVFDDVDDLDQVRGIVANYKWFGGGSRIII 329

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRDK +L+++  E    Y    L +E+A E F   AFK  +  ED    S S++ Y +G
Sbjct: 330 TTRDKHLLDQY--EVHASYEAKVLCYEDAIELFSWHAFKVQNIREDYVEMSNSMIKYAQG 387

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL LEVLGSSL  K K  W   +  L +    +I+D+   LKIS + L    + IFL I
Sbjct: 388 LPLALEVLGSSLYNKTKDEWKSAIEKLKKNPNKKINDV---LKISLDGLDRTQREIFLHI 444

Query: 242 ACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           ACFF+GE KDF+  ILDD     + +L D+ L++IS N + MHD++Q+MG  I R++  K
Sbjct: 445 ACFFKGEAKDFILRILDDHAEYDIGVLCDRCLITISYNKVEMHDLIQQMGWTIDREKHLK 504

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
           +P K  RLWDP +IS+     +G + +E I  DLS+ K + +       + NL++     
Sbjct: 505 DPSKWIRLWDPDDISKAFSAQEGMEQVEVISYDLSRSKEMQI-------LGNLKIIDLSR 557

Query: 362 PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVE 421
            +   + K+P +S+   L    +     L   P+    +                  L  
Sbjct: 558 SRL--LTKMPELSSMPNLEELNLVCCERLKKFPEIRENM----------------GRLER 599

Query: 422 LNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC 481
           ++L CS +++        +PSSI+    L  L+   C++   FP N   +  + +  +  
Sbjct: 600 VHLDCSGIQE--------IPSSIEYLPALEFLTLHYCRNFDKFPDNFGNLRHLRVINANR 651

Query: 482 VNLIEFPQIS--GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
            ++ E P+I   G +T+L+L ++AI+E+P SI  LT+LE L+L  CK L+ +  S C L+
Sbjct: 652 TDIKELPEIHNMGSLTKLFLIETAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGLK 711

Query: 540 SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
           SL  L L GC NL  FPEI+E ME L+ +   +TPITELP S E+L GLE L +++C  L
Sbjct: 712 SLGVLNLNGCSNLVAFPEIMEDMEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCENL 771

Query: 600 DNLPDNIGSLEYLYYI-LAAASAISQLPSSV-ALSNMLRSLDSSHCKGLESFPRTFLLGL 657
             LPD+IG+L +L  + +   S +  LP ++ +L   LR LD + C  ++          
Sbjct: 772 VTLPDSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQWCLRRLDLAGCNLMKG--------- 822

Query: 658 SAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNML 717
                          IP ++  LS L  L +S      +P  I Q+S LR + +    ML
Sbjct: 823 --------------AIPSDLWCLSLLRFLDVSEIPIPCIPTNIIQLSNLRTLRMNHCQML 868

Query: 718 QSLPELPLCLKYLHLIDCKMLQSL 741
           + +PELP  L+ L    C  L +L
Sbjct: 869 EEIPELPSRLEILEAQGCPHLGTL 892



 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 139/529 (26%), Positives = 233/529 (44%), Gaps = 94/529 (17%)

Query: 494  VTRLYLGQSAIEEV---------PSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
            +++ +  Q  +E+V            ++ L +L+++DL   + L ++      + +L  L
Sbjct: 518  ISKAFSAQEGMEQVEVISYDLSRSKEMQILGNLKIIDLSRSRLLTKMP-ELSSMPNLEEL 576

Query: 545  ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
             L+ C  L+ FPEI E M  L+R++ D + I E+PSS E LP LE L +  C   D  PD
Sbjct: 577  NLVCCERLKKFPEIRENMGRLERVHLDCSGIQEIPSSIEYLPALEFLTLHYCRNFDKFPD 636

Query: 605  NIGSLEYLYYILA----------------------AASAISQLPSSVALSNMLRSLDSSH 642
            N G+L +L  I A                        +AI +LP S+     L  L+  +
Sbjct: 637  NFGNLRHLRVINANRTDIKELPEIHNMGSLTKLFLIETAIKELPRSIGHLTELEELNLEN 696

Query: 643  CKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIK 701
            CK L S P + + GL ++G+L+++  + +   P+ +  +  L  L LS      LP  I+
Sbjct: 697  CKNLRSLPNS-ICGLKSLGVLNLNGCSNLVAFPEIMEDMEDLRELLLSKTPITELPPSIE 755

Query: 702  QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI---DCKMLQSLP----VLPFCLESLDLT 754
             +  L  + L++   L +LP+    L +L  +   +C  L +LP     L +CL  LDL 
Sbjct: 756  HLKGLEHLELKNCENLVTLPDSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQWCLRRLDLA 815

Query: 755  GCNMLR-SLPELPLCLQYLNLEDCNMLRSLPELPLC------LQLLTVRNCNRLQSLPEI 807
            GCN+++ ++P    CL  L   D + +  +P +P        L+ L + +C  L+ +PE+
Sbjct: 816  GCNLMKGAIPSDLWCLSLLRFLDVSEI-PIPCIPTNIIQLSNLRTLRMNHCQMLEEIPEL 874

Query: 808  LLCLQELDASVLEKL----SKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADS 863
               L+ L+A     L    +  SP   +     KS     E+            +I +DS
Sbjct: 875  PSRLEILEAQGCPHLGTLSTPSSPLWSYLLNLFKSRTQSCEY------------EIDSDS 922

Query: 864  LLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLPPH 922
            L    H+                        +V+PGS  IP W S+ S G    I+LP +
Sbjct: 923  LWYF-HVP----------------------KVVIPGSGGIPKWISHPSMGRQAIIELPKN 959

Query: 923  S-SCRNLIGFAFCAVLDSKKVDSDCFRYFYVSF-QFDLEIKTLSETKHV 969
                 N +GF   AV        D + +++  F QF+L I    +++ V
Sbjct: 960  RYEDNNFLGF---AVFFHHVPLDDFWSHWHRRFLQFELRISHDDQSERV 1005


>gi|255563210|ref|XP_002522608.1| conserved hypothetical protein [Ricinus communis]
 gi|223538084|gb|EEF39695.1| conserved hypothetical protein [Ricinus communis]
          Length = 840

 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 185/435 (42%), Positives = 261/435 (60%), Gaps = 18/435 (4%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V+I+GIWGMGGIGKTTLA+ IF++ S +F   CFV++VR   E +  L+ LQ +++S
Sbjct: 206 SKDVRILGIWGMGGIGKTTLARKIFERISSKFHSLCFVANVREKLEKST-LDFLQHEIIS 264

Query: 64  TTLSEKLEVAGPNIPHFTKER---VRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             L ++    G +I   +      + R K+ IVLDDVN+  Q+  LIG  D +  GSRI+
Sbjct: 265 KLLGKEYSDHGMSIKISSSFIIKWIMRKKIFIVLDDVNDSEQINFLIGTRDIYSPGSRII 324

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +T+RDK++L   +  +  IY V  L +  AF+ F   AFK N   E L   +R  V Y +
Sbjct: 325 ITSRDKQIL---KNGDADIYEVKKLNYHNAFQLFILHAFKGNPPAEALMEVARVAVEYGR 381

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL L+VLGS+L  K    W   L  L  I + +I ++   LKISF+ L    K IFLD
Sbjct: 382 GIPLALKVLGSNLYNKNIEEWKDHLKKLEGISDKKIRNV---LKISFDDLDKDEKEIFLD 438

Query: 241 IACFFEGEDKDFVASILDD-SESDVLDI--LIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
           IACFF+ E+KD V +IL     S ++ I  L+DKSL++IS N + MHD+LQ+MGR IV Q
Sbjct: 439 IACFFKSEEKDKVENILSSFGHSAIIGIRSLLDKSLITISNNKICMHDLLQQMGRDIVLQ 498

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTD-AIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
           E  K P KRSRLW P++I  VL  + G   +IE I LD+SK + + L+  AF  M+ L+ 
Sbjct: 499 EGVKNPEKRSRLWIPQDIYHVLTKDLGKSISIESISLDMSKGRDMELNCTAFERMNKLKF 558

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
            KFY P + +++       +       + L     +LP +LRYL+W  YPL++LP +F P
Sbjct: 559 LKFYSPYYEQLQ----AEIDPPCKIFNISLSKNFSFLPDELRYLYWHKYPLKSLPLSFCP 614

Query: 417 KNLVELNLRCSKVEQ 431
            NLV+L+L CS V+Q
Sbjct: 615 DNLVQLHLICSHVQQ 629


>gi|82542043|gb|ABB82029.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1147

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 247/761 (32%), Positives = 370/761 (48%), Gaps = 105/761 (13%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           ++D V IVGI GM GIGKTT+A+ +F+Q  + FE SCF+S++   S+   GL  LQKQ+L
Sbjct: 209 ATDDVLIVGIHGMPGIGKTTIARVVFNQLCYGFEESCFLSNINETSKQFNGLVPLQKQLL 268

Query: 63  STTLSEKLEVAGPNIPH----FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
                 K + A  N         KER+ R ++L+V DDV    QL  L+GE   FG GSR
Sbjct: 269 HDIF--KQDAANINCVDRGKVLIKERLCRQRVLVVADDVARQDQLNALMGERSWFGPGSR 326

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRD  VL K      + Y++  L+ +E+ + F   A ++    ED    S+ VV Y
Sbjct: 327 VIITTRDSSVLLK----ADQTYQIEELKPDESLQLFSWHALRDTEPAEDYIELSKDVVDY 382

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSI 237
             G PL LEV+G+ L  K +  W  V+  L RI     HDI   LKIS++ L    +++ 
Sbjct: 383 CGGLPLALEVMGACLSGKNRDGWKSVIDKLRRIPN---HDIQGKLKISYDSLDGEELQNA 439

Query: 238 FLDIACFFEGEDKDFVASILD-----DSESDVLDILIDKSLVSISG-NFLNMHDILQEMG 291
           FLDIACFF    K++VA +L      + E D L+ L  +SL+ ++    + MHD+L++MG
Sbjct: 440 FLDIACFFIDRKKEYVAKVLGARCGYNPEVD-LETLRGRSLIKVNAIGKITMHDLLRDMG 498

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R++VR+ S KEPGKR+R+W+ ++   VL+  KGTD +EG+ LD+   +  +L   +F  M
Sbjct: 499 REVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDVKASEAKSLSTGSFAKM 558

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
             L L                      L  + V L      L ++L  + W   PL+  P
Sbjct: 559 KRLNL----------------------LQINGVHLTGSFKLLSRELMLICWLQCPLKYFP 596

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
           S+F   NL  L+++ S +++ W+G+K            L+ L                  
Sbjct: 597 SDFTFDNLDVLDMQYSNLKKLWKGKKI-----------LNRLKI---------------- 629

Query: 472 CPVTINFSYCVNLIEFPQI--SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
               IN S+  NLI+ P +  S        G S++ EV  SI  LT L  L+L GC RLK
Sbjct: 630 ----INLSHSQNLIKTPNLHSSSLKKLKLKGCSSLVEVHQSIGNLTSLIFLNLEGCWRLK 685

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
            +  S   ++SL  L + GC  LE  PE +  ME L  + +D     +  SS   L  + 
Sbjct: 686 ILPESIVNVKSLKRLNISGCSQLEKLPERMGDMESLIELLADGIENKQFLSSIGQLKYVR 745

Query: 590 VL------FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQ-LPSSVALSNMLRSLDSSH 642
            L      F +D     +            +I A+   + + LP++         +D   
Sbjct: 746 RLSLRGYNFSQDSPSWLSPSSTSWPPSISSFISASVLCLKRLLPTTF--------IDWRS 797

Query: 643 CKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
            K LE         LS +GL   SD     +  +    SSLE L LSGN F SLP+ I  
Sbjct: 798 VKSLE---------LSYVGL---SDRVTNCV--DFRGFSSLEELDLSGNKFSSLPSGIGF 843

Query: 703 MSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPV 743
           +++L  + +++   L S+ +LP  L YL    CK L+ + +
Sbjct: 844 LAKLEMMDVQECKYLVSIRDLPSNLVYLFAGGCKSLERVRI 884


>gi|356560717|ref|XP_003548635.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1055

 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 217/648 (33%), Positives = 333/648 (51%), Gaps = 71/648 (10%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSET-AGGLEHLQKQ 60
           + S  V IVGIWGMGG+GKTT AKAI+++    F G CF+ D+R   ET   G  HLQ+Q
Sbjct: 180 NQSTKVCIVGIWGMGGLGKTTTAKAIYNRIHRRFMGRCFIEDIREVCETDRRGHLHLQEQ 239

Query: 61  MLSTTLSEKLEVAGPNIPH-FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           +LS  L  K+ +    I     + ++ R K LIVLDDV E GQLK L G    FGQGS +
Sbjct: 240 LLSNVLKTKVNIQSVGIGRAMIESKLSRRKALIVLDDVIEFGQLKVLCGNRKWFGQGSIV 299

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TTRD R+L K + +   +Y++  ++  ++ E F   AF E    E+ +  +R+VV+Y 
Sbjct: 300 IITTRDVRLLHKLKVD--FVYKMEEMDENKSLELFSWHAFGEAKPTEEFDELARNVVAYC 357

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIF 238
            G PL LEV+GS L  +RK  W  VL  L  I   ++ +    L+IS+N L   + K IF
Sbjct: 358 GGLPLALEVIGSYLSERRKKEWESVLSKLKIIPNDQVQEK---LRISYNGLGDHMEKDIF 414

Query: 239 LDIACFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQI 294
           LDI CFF G+D+ +V  IL+     +D+ + +L+++SLV ++  N L MH ++++M R+I
Sbjct: 415 LDICCFFIGKDRAYVTEILNGCGLHADIGITVLMERSLVKVAKNNKLEMHPLIRDMDREI 474

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           +R+ S K+PGKRSRLW  ++   VL  N GT AIEG+ L L           AF  M  L
Sbjct: 475 IRESSTKKPGKRSRLWFQEDSLNVLTKNTGTKAIEGLALKLHSSSRDCFKAYAFKTMDQL 534

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL                      L    V+L     YLPK LR+++W  +PL+ +P NF
Sbjct: 535 RL----------------------LQLEHVELTGDYGYLPKHLRWIYWKRFPLKYMPKNF 572

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
               ++ ++L+ S +   W+ E   +P       +L  L                     
Sbjct: 573 FLGGVIAIDLKHSNLRLVWK-EPQVLP-------WLKIL--------------------- 603

Query: 475 TINFSYCVNLIEFPQISG--KVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
             N S+   L E P  S    + +L L    ++ +V  SI  L +L +++L+ C  L  +
Sbjct: 604 --NLSHSKYLTETPDFSNLPSLEKLILKDCPSLCKVHQSIGDLQNLLLINLKDCTSLSNL 661

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
                KL+SL TLIL GC  ++   E + +ME+L  + +  T + ++  S   L  +E  
Sbjct: 662 PREIYKLKSLETLILSGCSKIDKLEEDIVQMEYLTTLIAKNTAVKQVSFSIVRLKSIE-- 719

Query: 592 FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
           ++  C   + L  N+     L ++    + +S++ S    S+ L S+D
Sbjct: 720 YISLCG-YEGLSRNVFPSIILSWMSPTMNPVSRIRSFSGTSSSLISMD 766



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 5/161 (3%)

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
           G V  + L  S +  V    + L  L++L+L   K L   +  F  L SL  LIL  C +
Sbjct: 575 GGVIAIDLKHSNLRLVWKEPQVLPWLKILNLSHSKYLTE-TPDFSNLPSLEKLILKDCPS 633

Query: 552 LEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
           L    + +  +++L  I   D T ++ LP     L  LE L +  CSK+D L ++I  +E
Sbjct: 634 LCKVHQSIGDLQNLLLINLKDCTSLSNLPREIYKLKSLETLILSGCSKIDKLEEDIVQME 693

Query: 611 YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
           YL  ++A  +A+ Q+  S+     L+S++     G E   R
Sbjct: 694 YLTTLIAKNTAVKQVSFSIV---RLKSIEYISLCGYEGLSR 731


>gi|15238999|ref|NP_196686.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|8953387|emb|CAB96660.1| RPP1 disease resistance protein-like [Arabidopsis thaliana]
 gi|332004269|gb|AED91652.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1189

 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 248/818 (30%), Positives = 390/818 (47%), Gaps = 113/818 (13%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLE----HLQ- 58
            +D V+I+GIWG  GIGKTT+A+ +++Q SH F+ S F+ +++ N     G +     LQ 
Sbjct: 254  TDEVRIIGIWGPPGIGKTTIARVVYNQLSHSFQLSVFMENIKANYTRPTGSDDYSAKLQL 313

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            +QM  + ++++ ++    IPH    ++R++  K+L+VLD VN+  QL  +  E   FG G
Sbjct: 314  QQMFMSQITKQKDI---EIPHLGVAQDRLKDKKVLVVLDGVNQSVQLDAMAKEAWWFGPG 370

Query: 117  SRIVVTTRDKRVLEKFRGEE-KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
            SRI++TT+D+++   FR      IY+V+    EEA + FC +AF +N   +     +  V
Sbjct: 371  SRIIITTQDQKL---FRAHGINHIYKVDFPPTEEALQIFCMYAFGQNSPKDGFQNLAWKV 427

Query: 176  VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
            ++     PL L ++GS      +  W K    L R+  S   DI  ILK S++ L    K
Sbjct: 428  INLAGNLPLGLRIMGSYFRGMSREEWKK---SLPRLESSLDADIQSILKFSYDALDDEDK 484

Query: 236  SIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMG 291
            ++FL IACFF G++   +   L     +V   L++L +KSL+S S    + MH +L ++G
Sbjct: 485  NLFLHIACFFNGKEIKILEEHLAKKFVEVRQRLNVLAEKSLISFSNWGTIEMHKLLAKLG 544

Query: 292  RQIVRQESEKEPGKRSRLWDPKEISRVLKHN-KGTDAIEGIFLDLSKIKGINLDPRAFTN 350
             +IVR +S  EPG+R  L+D +EI  VL  +  G+ ++ GI       +  +++ R F  
Sbjct: 545  GEIVRNQSIHEPGQRQFLFDGEEICDVLNGDAAGSKSVIGIDFHYIIEEEFDMNERVFEG 604

Query: 351  MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
            MSNL+  +F                     +  +QL  GL YL +KL+ L W  +P+  L
Sbjct: 605  MSNLQFLRF------------------DCDHDTLQLSRGLSYLSRKLQLLDWIYFPMTCL 646

Query: 411  PSNFKPKNLVELNLRCSKVEQPWEGEKAC------------------------------- 439
            PS    + L+ELNL  SK++  WEG K                                 
Sbjct: 647  PSTVNVEFLIELNLTHSKLDMLWEGVKPLHNLRQMDLSYSVNLKELPDLSTAINLRKLIL 706

Query: 440  --------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS 491
                    +PS I N   L  L   GC SL   PS    +    +   YC NL+E P   
Sbjct: 707  SNCSSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSI 766

Query: 492  GKVTR-----LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLIL 546
            G         LY   S I  +PSSI    +L +LDL GC  L  + +S     +L  L L
Sbjct: 767  GNAINLRELDLYYCSSLI-RLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDL 825

Query: 547  LGCLNLEHFPEILEKMEHLKR-IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
              C  L   P  +    +L+  +  D + + ELPSS  N   L  + + +CS L  LP +
Sbjct: 826  RRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPLS 885

Query: 606  IGSLEYLY-YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLH 664
            IG+L+ L   IL   S +  LP ++ L + L  L  + C  L+ FP       + +  L+
Sbjct: 886  IGNLQKLQELILKGCSKLEDLPININLES-LDILVLNDCSMLKRFPEIS----TNVRALY 940

Query: 665  ISDYAVREIPQEIAYLSSLEILY---------------------LSGNNFESLPAIIKQM 703
            +   A+ E+P  I     L+ L                      LSG   + +P +IK++
Sbjct: 941  LCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHVLDIITNLDLSGKEIQEVPPLIKRI 1000

Query: 704  SQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
            S+L+ + L+ +  + SLP++P  LK++   DC+ L+ L
Sbjct: 1001 SRLQTLILKGYRKVVSLPQIPDSLKWIDAEDCESLERL 1038


>gi|356559997|ref|XP_003548282.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1420

 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 249/756 (32%), Positives = 360/756 (47%), Gaps = 103/756 (13%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQF--SHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           S D V ++GI GMGG+GK+TLA+A++++   + +F+G CF+++VR  S+   GLEHLQ+ 
Sbjct: 211 SDDGVHMIGIHGMGGLGKSTLARAVYNELIIAEKFDGFCFLANVREKSDKKDGLEHLQRI 270

Query: 61  MLSTTLSEK---LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +LS  L EK   L      I    + R++  K+L++LDDVN  GQL+  IG  D FG GS
Sbjct: 271 LLSEILGEKNISLTSTQQGIS-IIQSRLKGKKVLLILDDVNTHGQLQ-AIGRRDWFGPGS 328

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           +I++TTRD+++L     E  + Y +  L  ++A +     AFK+             VV+
Sbjct: 329 KIIITTRDEQLLAYH--EVNETYEMKELNQKDALQLLTWNAFKKEKADPTYVEVLHRVVA 386

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y  G PL LEV+GS L  K    W   +    RI + EI    D+L +SF+ L    + +
Sbjct: 387 YASGLPLALEVIGSHLVGKSIEAWESAIKQYKRIPKKEI---LDVLTVSFDALEEEEQKV 443

Query: 238 FLDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSIS--GNFLNMHDILQEMG 291
           FLDIAC  +G    E +  +  + DD     + +L++KSL+ +S     +NMHD++Q+MG
Sbjct: 444 FLDIACCLKGWTLTEVEHILPGLYDDCMKHNIGVLVEKSLIKVSWGDGVVNMHDLIQDMG 503

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS---KIKGINLDPRAF 348
           R+I +Q S KEPGKR RLW  K+I +VL  N GT  I+ I LDLS   K   I+ +  AF
Sbjct: 504 RRIDQQRSSKEPGKRRRLWLTKDIIQVLDDNSGTSEIQMISLDLSLSEKETTIDWNGNAF 563

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             + NL++      KF                        G +Y P+ LR L W  YP  
Sbjct: 564 RKIKNLKILFIRNGKF----------------------SKGPNYFPESLRVLEWHGYPSN 601

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            LPSNF PK LV   L  S +             S + F+ L  L F  C+ L   P   
Sbjct: 602 CLPSNFPPKELVICKLSQSYITS------FGFHGSRKKFRKLKVLKFDYCKILTEIPDVS 655

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
             V    ++F+ C NLI                     V  SI  L  L++L   GC +L
Sbjct: 656 VLVNLEELSFNRCGNLI--------------------TVHHSIGFLNKLKILSAYGCSKL 695

Query: 529 KRISTSF--CKLRSLVTLILLGCLNLEHFPEILEKMEH-LKRIYSDRTPITELPSSFENL 585
               T+F    L SL  L L  C +LE+FPEIL +M++ L         + ELP SF+NL
Sbjct: 696 ----TTFPPLNLTSLEGLQLSACSSLENFPEILGEMKNLLMLQLFGLLGVKELPVSFQNL 751

Query: 586 PGLEVLFVEDCSKLDNLPDN-IGSLEYLYYILAAASAISQLPSSVALSNMLRSL-----D 639
            GL+ L ++DC     LP N I  +  L  +LA +    Q   S      + S+     D
Sbjct: 752 VGLQSLILQDCENF-LLPSNIIAMMPKLSSLLAESCKGLQWVKSEEGEEKVGSIVCSNVD 810

Query: 640 SSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAI 699
            S   G   +   F  G   M L H+   ++R+                  NNF  LP  
Sbjct: 811 DSSFDGCNLYDDFFSTGF--MQLDHVKTLSLRD------------------NNFTFLPEC 850

Query: 700 IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
           +K++  L  + +     LQ +  +P  LK     +C
Sbjct: 851 LKELQFLTRLDVSGCLRLQEIRGVPPNLKEFMAREC 886


>gi|12056928|gb|AAG48132.1|AF322632_1 putative resistance protein [Glycine max]
          Length = 1093

 Score =  303 bits (776), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 261/852 (30%), Positives = 403/852 (47%), Gaps = 129/852 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE---KLEVAGPN 76
           KTTLA+A++   +  F+ SCF+ +VR N+    GL HLQ+ +L+    E   +L      
Sbjct: 225 KTTLARAVYHSAAGHFDTSCFLGNVRENA-MKHGLVHLQQTLLAEIFRENNIRLTSVEQG 283

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           I    K+ + R +LL+VLDDV E+  L+ L+G  D FG GSR+++TTRD+ +L K  G +
Sbjct: 284 IS-LIKKMLPRKRLLLVLDDVCELDDLRALVGSPDWFGPGSRVIITTRDRHLL-KAHGVD 341

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
           K +Y V  L   EA E  C  AF+ +    D        +++  G PL LE++GSSL  +
Sbjct: 342 K-VYEVEVLANGEALELLCWKAFRTDRVHPDFINKLNRAITFASGIPLALELIGSSLYGR 400

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
               W   L    +   +   DI+  LKISF+ L    K +FLDIACFF G +   +  I
Sbjct: 401 GIEEWESTLDQYEK---NPPRDIHMALKISFDALGYLEKEVFLDIACFFNGFELAEIEHI 457

Query: 257 LDDSESDVLDI----LIDKSLVSISGNF-LNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
           L       L      L++KSL+ I  +  + MHD++Q+MGR+IVRQES + PGKRSRLW 
Sbjct: 458 LGAHHGCCLKFHIGALVEKSLIMIDEHGRVQMHDLIQQMGREIVRQESPEHPGKRSRLWS 517

Query: 312 PKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSNLRLF---KFYV--PKFY 365
            ++I  VL+ N GT  I+ I LD SK  K +  D  AF  M +LR     K +   PK +
Sbjct: 518 TEDIVHVLEDNTGTCKIQSIILDFSKSEKVVQWDGMAFVKMISLRTLIIRKMFSKGPKNF 577

Query: 366 EIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLR 425
           +I                             L+ L W   P ++LPS+FKP+ L  L L 
Sbjct: 578 QI-----------------------------LKMLEWWGCPSKSLPSDFKPEKLAILKL- 607

Query: 426 CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLI 485
                 P+ G  +     + NF ++  L+F  C+ L   P    F     + F +C NL+
Sbjct: 608 ------PYSGFMSL---ELPNFLHMRVLNFDRCEFLTRTPDLSGFPILKELFFVFCENLV 658

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
           E                    +  S+  L  LE+++  GC +L+       KL SL ++ 
Sbjct: 659 E--------------------IHDSVGFLDKLEIMNFEGCSKLETFPP--IKLTSLESIN 696

Query: 546 LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
           L  C +L  FPEIL KME++  +  + T I++LP+S   L  L+ L + +C         
Sbjct: 697 LSHCSSLVSFPEILGKMENITHLSLEYTAISKLPNSIRELVRLQSLELHNC--------- 747

Query: 606 IGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL-------ESFPRTFLLGLS 658
                           + QLPSS+     L  L    C+GL       +   ++ L+  S
Sbjct: 748 ---------------GMVQLPSSIVTLRELEVLSICQCEGLRFSKQDEDVKNKSLLMPSS 792

Query: 659 AMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM 716
            +  +++   ++ +  I   +A+ ++++ L LS NNF  LP+ I++   LR ++L+    
Sbjct: 793 YLKQVNLWSCSISDEFIDTGLAWFANVKSLDLSANNFTILPSCIQECRLLRKLYLDYCTH 852

Query: 717 LQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLED 776
           L  +  +P  L+ L  I C  L+ L  L   LES    GC           CL+ L L+D
Sbjct: 853 LHEIRGIPPNLETLSAIRCTSLKDLD-LAVPLESTK-EGC-----------CLRQLILDD 899

Query: 777 CNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDL-QWAPES 835
           C  L+ +  +P  ++ L+  NC  L +    +L  QEL  +  ++ S     + +W    
Sbjct: 900 CENLQEIRGIPPSIEFLSATNCRSLTASCRRMLLKQELHEAGNKRYSLPGTRIPEWFEHC 959

Query: 836 LKSAAICFEFTN 847
            +  +I F F N
Sbjct: 960 SRGQSISFWFRN 971


>gi|126571551|gb|ABO21407.1| TMV resistance protein N [Nicotiana tabacum]
          Length = 1141

 Score =  303 bits (775), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 241/730 (33%), Positives = 356/730 (48%), Gaps = 122/730 (16%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQF------SHEFEGSCFVSDVRGNSETAGGLEHLQ 58
           + V+I+GIWGMGG+GKTT+A+ +FD        S++F+G+CF+ D++ N     G+  LQ
Sbjct: 207 NDVRIMGIWGMGGVGKTTIARGMFDTLLGRRDSSYQFDGACFLKDIKENKH---GMHSLQ 263

Query: 59  KQMLSTTLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQ-LKRLIGELDQFGQG 116
             +LS  L EK          H    R+R  K+LIVLDD+++    L+ L G+LD FG G
Sbjct: 264 NILLSNLLREKANYNNEEEGKHQMASRLRSKKVLIVLDDIDDKDHYLEYLAGDLDWFGDG 323

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI+VTTRDK ++EK       IY V+ L   E+ +    +AF +    E     S  VV
Sbjct: 324 SRIIVTTRDKNLIEK----NDVIYEVSALPVHESIQLLNQYAFGKKVPDEHFKKLSLEVV 379

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           +Y KG PL L+V GS L   R + W   +  +     SEI    + LKIS++ L P  + 
Sbjct: 380 NYAKGLPLALKVWGSLLHNLRLTEWRSAMEQMKNNSNSEI---VEKLKISYDGLEPIQQE 436

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGR 292
           +FLDIACF  GE+KD++  IL+     V   L ILIDKSLV IS  N + MHD++Q+M +
Sbjct: 437 MFLDIACFLRGEEKDYILQILESCHIGVEYGLRILIDKSLVFISEYNQVQMHDLIQDMAK 496

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
            IV    +K+PG+RSRLW  +E+  V+ ++ GT A+E I++  S    +     A  NM 
Sbjct: 497 YIV--NFQKDPGERSRLWLAEEVEEVMSNSTGTMAMEAIWVS-SYSSTLRFSNEAMKNMK 553

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            LR+F               MS+            + ++YLP  L     + YP  + PS
Sbjct: 554 RLRIFNI------------GMSSTH----------DAIEYLPHNLCCFVCNNYPWESFPS 591

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPS-------------------SIQNFKY---- 449
            F+ K LV L LR + +   W  E   +PS                    + N +Y    
Sbjct: 592 IFELKMLVHLQLRHNSLPHLWT-ETKHLPSLRRLDLSWSKRLMRTPDFTGMPNLEYVDLY 650

Query: 450 -----------------LSALSFKGCQSLRSFPS-NLHFVCPVTINFSYCVNLIEFPQIS 491
                            L  L   GC+SL+ FP  N+  +  +T+    C  L + P+I 
Sbjct: 651 QCSNLEEVHHSLGCCSKLIQLILNGCKSLKKFPRVNVESLKYLTVQG--CSRLEKIPEIH 708

Query: 492 GKVT---RLYLGQSAIEEVPSSI-ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL 547
           G++    ++++  S I E+PSSI +  T +  L     K L  + +S C+L+SLV+L + 
Sbjct: 709 GRMKPEIQIHMLGSGIRELPSSITQYQTHITKLLSWNMKNLVALPSSICRLKSLVSLSVP 768

Query: 548 GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF------------------------- 582
           GC  LE  PE +  +++L+ + +  T I   PSS                          
Sbjct: 769 GCSKLESLPEEIGDLDNLRVLDARDTLILRPPSSIVRLNKLIILMFGGFKDVVNFEFPPV 828

Query: 583 -ENLPGLEVLFVEDCSKLD-NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS 640
            E L  LE L +  C+ +D  LP++IGSL  L  +  + +    LP S+A    LRSLD 
Sbjct: 829 AEGLRSLEHLDLTCCNLIDGGLPEDIGSLSSLKKLDLSRNNFEHLPPSIAQLGALRSLDL 888

Query: 641 SHCKGLESFP 650
             C+ L   P
Sbjct: 889 KDCQRLTQLP 898


>gi|227438219|gb|ACP30599.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 963

 Score =  303 bits (775), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 232/690 (33%), Positives = 353/690 (51%), Gaps = 80/690 (11%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           + V++VGIWGMGGIGKTT+AK I+  F  EF G+C + +V+   +  G   HL++++LS 
Sbjct: 254 NDVRMVGIWGMGGIGKTTIAKYIYKGFLSEFYGACLLENVKKEFKRHGP-SHLREKILSE 312

Query: 65  TLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
              +K            K+R++  K+L+VLDDV+++ QL+ L G  D FG GSRIV+TTR
Sbjct: 313 IFRKKDMNTWNKDSDVMKQRLQGKKVLLVLDDVDDIQQLEELAGSSDWFGPGSRIVITTR 372

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           D+RVL++   E  +IY V  L   +A + F   AFK+    ED    S  VV    G PL
Sbjct: 373 DRRVLDQHDVE--RIYEVKPLRTTQALQLFSKHAFKQPRPSEDYRELSLDVVEQLGGLPL 430

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            ++V+G SL  +    W   L DL R   +  +  +  LK+S+  L    K IFL +A  
Sbjct: 431 AIQVVGGSLYRRELKFWEDKL-DLLR--NNGDNSAFKALKVSYEALDEIEKKIFLYVALC 487

Query: 245 FEGEDKDFVASILD----DSESDVLDI------LIDKSLVSISGN-FLNMHDILQEMGRQ 293
           F G   D V  +LD     S   VL        L++K ++S+S N  L +HD+LQ+M  +
Sbjct: 488 FNGVYMDRVRKVLDLCFVSSRRRVLPTRPSIVALMEKCMISLSKNKLLWVHDLLQDMAEE 547

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAI--EGIFLDLSKIKGINLDPRAFTNM 351
           I+ +  ++ P KR  LWD ++I+ V   N G +AI  E IFLD+S+   +++ P  F  M
Sbjct: 548 IICEGKDERPWKRLMLWDFEDINHVFSTNMGDEAIDVESIFLDMSEGNELSITPGIFKKM 607

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NL+L +FY              T   +  S+ ++ +GL+YLP  LRYLHWD Y L++LP
Sbjct: 608 PNLKLLEFY--------------TNSSVEESRTRMLDGLEYLPT-LRYLHWDAYHLKSLP 652

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEK------------AC-------------------- 439
             F    LVELNL  S ++  W G +            +C                    
Sbjct: 653 PQFCTSFLVELNLSHSSIQTVWSGSQQDLGNLRSLNLISCKHLNEFPDLSKATNLESLKL 712

Query: 440 --------VP-SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
                   +P SS++    L       C++L+S P+N++     +++ + C +L EFP I
Sbjct: 713 SNCDNLVEIPDSSLRQLNKLVHFKLSNCKNLKSLPNNINLKSLRSLHLNGCSSLEEFPFI 772

Query: 491 SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
           S  V +L L +++I++VP SIE LT L  + L GCKRL  +      L+ L  L L  C 
Sbjct: 773 SETVEKLLLNETSIQQVPPSIERLTRLRDIHLSGCKRLMNLPECIKNLKFLNDLGLANCP 832

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
           N+  FPE+   +  L     ++T I E+P +  +   L  L +  C KL  LP  +  L 
Sbjct: 833 NVISFPELGRSIRWLNL---NKTGIQEVPLTIGDKSELRYLNMSGCDKLMTLPPTVKKLG 889

Query: 611 YLYYI-LAAASAISQLPSSVALSNMLRSLD 639
            L Y+ L     +++ P ++A    +++LD
Sbjct: 890 QLKYLNLRGCVNVTESP-NLAGGKTMKALD 918



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 125/268 (46%), Gaps = 32/268 (11%)

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLP-SSVALSNM 634
           T    S ++L  L  L +  C  L+  PD   +       L+    + ++P SS+   N 
Sbjct: 672 TVWSGSQQDLGNLRSLNLISCKHLNEFPDLSKATNLESLKLSNCDNLVEIPDSSLRQLNK 731

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLS-SLEILYLSGNNF 693
           L     S+CK L+S P    + L ++  LH++  +  E   E  ++S ++E L L+  + 
Sbjct: 732 LVHFKLSNCKNLKSLPNN--INLKSLRSLHLNGCSSLE---EFPFISETVEKLLLNETSI 786

Query: 694 ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH---LIDCKMLQSLPVLPFCLES 750
           + +P  I+++++LR IHL     L +LPE    LK+L+   L +C  + S P L   +  
Sbjct: 787 QQVPPSIERLTRLRDIHLSGCKRLMNLPECIKNLKFLNDLGLANCPNVISFPELGRSIRW 846

Query: 751 LDLTGCNMLRSLPELPLC------LQYLNLEDCNMLRSLPELPLC-----LQLLTVRNCN 799
           L+L        + E+PL       L+YLN+  C+ L +LP  P       L+ L +R C 
Sbjct: 847 LNLNKT----GIQEVPLTIGDKSELRYLNMSGCDKLMTLP--PTVKKLGQLKYLNLRGCV 900

Query: 800 RLQSLPEIL--LCLQELD---ASVLEKL 822
            +   P +     ++ LD    S+ EKL
Sbjct: 901 NVTESPNLAGGKTMKALDLHGTSITEKL 928


>gi|357468659|ref|XP_003604614.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
 gi|355505669|gb|AES86811.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
          Length = 1160

 Score =  302 bits (773), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 211/592 (35%), Positives = 315/592 (53%), Gaps = 74/592 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML- 62
           S+   ++G+WGMGGIGKTT+AK+I+++    FEG  F+ ++R   E A G  +LQ++++ 
Sbjct: 244 SNDALLLGMWGMGGIGKTTIAKSIYNKIGRNFEGRSFLENIREVWEQASGQLYLQERLMN 303

Query: 63  -----STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
                +TT  + +E +G +I    KER+   ++LIVLDDVN++ QL  L G    F  GS
Sbjct: 304 DILKDTTTKIQSIE-SGKSI---LKERLCHKRVLIVLDDVNKLDQLNALCGSCKWFAPGS 359

Query: 118 RIVVTTRDKRVLEKFRGEE-KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           RI++TTRDK +L   RG++  KIY +  ++  E+ E F   AFK+    ED +  S++VV
Sbjct: 360 RIIITTRDKHIL---RGKQVDKIYIMKEMDESESLELFSWHAFKQTRPREDFSEISKNVV 416

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-K 235
            Y+ G PL LEVLGS L  +    W  VL  L RI   ++H     LKIS++ L     K
Sbjct: 417 KYSAGLPLALEVLGSYLFDREILEWRSVLDKLKRIPNDQVHKK---LKISYDGLNDDTQK 473

Query: 236 SIFLDIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISG-NFLNMHDILQEMG 291
            IFLDI+CFF G D++ V  ILD         + +L+++SLV++   N L MHD+L++MG
Sbjct: 474 EIFLDISCFFIGMDRNDVIRILDGCGFFAGIGISVLVERSLVTVDDKNKLGMHDLLRDMG 533

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+I+R++S KEP + SRLW  +++  VL  + GT A+EG+ L L          + F NM
Sbjct: 534 REIIREKSPKEPEEHSRLWFHEDVIDVLLEHTGTKAVEGLSLKLPGRSAQRFSTKTFENM 593

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
             LRL                      L  S VQL     +L +KLR+L W+ +PL  +P
Sbjct: 594 KKLRL----------------------LQLSGVQLDGDFKHLSRKLRWLQWNGFPLTCIP 631

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
           SNF  +NLV + L  S +   W+         +Q  + L  L+    Q L   P      
Sbjct: 632 SNFYQRNLVSIVLENSNIRLVWK--------EMQGMEQLKILNLSHSQYLTQTP------ 677

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                +FSY  NL           +L L     + E+  SI  L  + +++L+ C  L  
Sbjct: 678 -----DFSYLPNL----------EKLVLKDCPRLSEISQSIGHLKKILLINLKDCISLCN 722

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
           +  +   L+SL TLIL GC  ++   E LE+ME L  + ++ T IT++P S 
Sbjct: 723 LPRNIYTLKSLKTLILSGCSMIDTLEEDLEQMESLTTLIANNTGITKVPFSI 774


>gi|356573485|ref|XP_003554889.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1134

 Score =  301 bits (772), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 248/761 (32%), Positives = 367/761 (48%), Gaps = 110/761 (14%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE-KLEVAGPNIP 78
           KTTLA A+++  +  F+GSCF+ +VR NS+  G L+HLQ  +LS  + E K+ +A     
Sbjct: 291 KTTLALAVYNYVADHFDGSCFLENVRENSDKHG-LQHLQSIILSELVKENKMNIATVKQG 349

Query: 79  -HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
               + R++R K+L+++DDV++  QL+ ++G  D FG GSRI++TTRD+++L     E +
Sbjct: 350 ISMIQHRLQRKKVLLIVDDVDKPEQLQAIVGRPDWFGSGSRIIITTRDEKLLASH--EVR 407

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           + Y VN L   +A +     AFK              VV+Y  G PL L+V+GS+L  K 
Sbjct: 408 RTYEVNELNRNDALQLLTWEAFKMQKVDPSYEEMLNRVVTYASGLPLALKVIGSNLFGKS 467

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W   ++   RI  ++I     ILK+SF+ L    KS+FLDIAC F+G + + V  IL
Sbjct: 468 IQEWKSAINQYQRIPNNQI---LKILKVSFDALEEEEKSVFLDIACCFKGCELEEVEDIL 524

Query: 258 DDSESDVLD----ILIDKSLV--SISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
                D +     +LIDKSL+  S+ G  + +HD++++MGR+IVRQES K+PGKRSRLW 
Sbjct: 525 HAHYGDCMKYHIGVLIDKSLLKLSVHGTMVTLHDLIEDMGREIVRQESPKDPGKRSRLWF 584

Query: 312 PKEISRVLKHNKGTDAIEGIFLD---LSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIE 368
            ++I +VL+ N GT  IE I L+   L K   +  + +AF  M NL+        F +  
Sbjct: 585 HEDIIQVLEDNTGTSEIEIICLNFPLLDKEDIVEWNRKAFKKMKNLKTLIIKSGHFCK-- 642

Query: 369 KLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSK 428
                               G  YLP  LR L W  YP   LPS+F+ K L    L    
Sbjct: 643 --------------------GPRYLPNSLRVLEWWRYPSHDLPSDFRSKKLGICKL---- 678

Query: 429 VEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP 488
                     C  +S++   +L+                  F+    +N   C  L + P
Sbjct: 679 --------PHCCFTSLELVGFLTK-----------------FMSMRVLNLDKCKCLTQIP 713

Query: 489 QISG--KVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
            +SG   + +L       +  + SSI  L  L++L   GC +L  +S    KL SL  L 
Sbjct: 714 DVSGLPNLEKLSFQHCQNLTTIHSSIGFLYKLKILSAFGCTKL--VSFPPIKLTSLEKLN 771

Query: 546 LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
           L  C +LE FPEIL KME+++ +  + T I ELPSS  NL  L+ L + +C         
Sbjct: 772 LSRCHSLESFPEILGKMENIRELQCEYTSIKELPSSIHNLTRLQELQLANC--------- 822

Query: 606 IGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL---------ESFPRTFLLG 656
                           + QLPSS+ +   L  L     KG          E F  + +  
Sbjct: 823 ---------------GVVQLPSSIVMMPELTELIGWKWKGWQWLKQEEGEEKFGSSIV-- 865

Query: 657 LSAMGLLHISDYAVREIPQEIAY--LSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDF 714
            S + LL  SD  + +    I +   + ++ L LS NNF  LP  IK+   LR +++ D 
Sbjct: 866 SSKVELLWASDCNLYDDFFSIGFTRFAHVKDLNLSKNNFTMLPECIKEFQFLRKLNVNDC 925

Query: 715 NMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTG 755
             LQ +  +P  LK+    +CK L S     F  + L  TG
Sbjct: 926 KHLQEIRGIPPSLKHFLATNCKSLTSSSTSMFLNQELHETG 966



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 142/604 (23%), Positives = 233/604 (38%), Gaps = 121/604 (20%)

Query: 486  EFPQISGKVTRLYLGQSAIEEV-----PSSIE--CLTDLEVLDLRGCKRLKRISTSFCKL 538
            E P+  GK +RL+  +  I+ +      S IE  CL +  +LD        R   +F K+
Sbjct: 571  ESPKDPGKRSRLWFHEDIIQVLEDNTGTSEIEIICL-NFPLLDKEDIVEWNR--KAFKKM 627

Query: 539  RSLVTLILLG---CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN-------LP-- 586
            ++L TLI+     C    + P  L  +E        R P  +LPS F +       LP  
Sbjct: 628  KNLKTLIIKSGHFCKGPRYLPNSLRVLEWW------RYPSHDLPSDFRSKKLGICKLPHC 681

Query: 587  ---------------GLEVLFVEDCSKLDNLPDNIG--SLEYLYYILAAASAISQLPSSV 629
                            + VL ++ C  L  +PD  G  +LE L +       ++ + SS+
Sbjct: 682  CFTSLELVGFLTKFMSMRVLNLDKCKCLTQIPDVSGLPNLEKLSF--QHCQNLTTIHSSI 739

Query: 630  ALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS 689
                 L+ L +  C  L SFP   L  L  + L     +++   P+ +  + ++  L   
Sbjct: 740  GFLYKLKILSAFGCTKLVSFPPIKLTSLEKLNLSRC--HSLESFPEILGKMENIRELQCE 797

Query: 690  GNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM--LQSLPVLPFC 747
              + + LP+ I  +++L+ + L +  ++Q    + +  +   LI  K    Q L      
Sbjct: 798  YTSIKELPSSIHNLTRLQELQLANCGVVQLPSSIVMMPELTELIGWKWKGWQWLKQE--- 854

Query: 748  LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCN----RLQS 803
             E  +  G +++ S  EL      L   DCN+      +    +   V++ N        
Sbjct: 855  -EGEEKFGSSIVSSKVEL------LWASDCNLYDDFFSIGFT-RFAHVKDLNLSKNNFTM 906

Query: 804  LPEILLCLQELDASVLEKLS----KHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKI 859
            LPE   C++E     L KL+    KH  +++  P SLK     F  TNC  L   + +  
Sbjct: 907  LPE---CIKEF--QFLRKLNVNDCKHLQEIRGIPPSLKH----FLATNCKSLTSSSTS-- 955

Query: 860  LADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
                                 M +N++L E   +   LPG  IP+WF +QS G SI    
Sbjct: 956  ---------------------MFLNQELHETGKTQFYLPGERIPEWFDHQSRGPSISFWF 994

Query: 920  PPHSSCRNLI-GFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYI 978
                  RN   G   C V+     DS       +S       K    + +  +G +  Y+
Sbjct: 995  ------RNKFPGKVLCLVIGPMDDDSGML----ISKVIINGNKYFRGSGYFMMGMDHTYL 1044

Query: 979  EDLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGLCPVYANPSETKD 1038
             DL      I+ F+  L V   + ++H   T++   E      K CG+  V+   S  KD
Sbjct: 1045 FDL-----QIMEFEDNLYVPLENEWNHAEVTYEGLEETS--TPKECGI-HVFKQESSMKD 1096

Query: 1039 NTFT 1042
              F 
Sbjct: 1097 IRFA 1100


>gi|449447549|ref|XP_004141530.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
 gi|449481488|ref|XP_004156198.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1009

 Score =  301 bits (772), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 244/788 (30%), Positives = 385/788 (48%), Gaps = 125/788 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE-KLEVAGPNIP 78
           KTT+AKA+F   + EF GSC + +V+   +  GGL  LQ+++LS TL   K+++   +  
Sbjct: 229 KTTIAKAVFKSVAREFHGSCILENVKKTLKNVGGLVSLQEKLLSDTLMRGKVQIKDGDGV 288

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K+ +   K+ +VLD V+   Q+K L G  + FG GSRI++TTRD+ +L     + + 
Sbjct: 289 EMIKKNLGNQKVFVVLDGVDHFSQVKDLAGGEEWFGCGSRIIITTRDEGLLLSLGVDIR- 347

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            Y V   + EEA + FC+ AF      +         + Y +G PL ++ LG SL  +  
Sbjct: 348 -YNVESFDDEEALQLFCHEAFGVKFPKKGYLDLCMPFIEYAEGLPLAIKALGHSLHNRLF 406

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKD-----FV 253
             W   +  LN    S    +Y+ LKIS++ L    + IFL IACF +G++KD     FV
Sbjct: 407 KSWEGAIRKLN---NSLNRQVYENLKISYDALGKEERRIFLYIACFLKGQNKDQVIDTFV 463

Query: 254 ASILD------------------DSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
           +  +D                  ++ +D L  L +KSL+++  + + MH++ Q++G++I 
Sbjct: 464 SFEIDAADGLLTRKNAADVLCIKETAADALKKLQEKSLITMLYDKIEMHNLHQKLGQEIF 523

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
            +ES +   K SRLW  ++++  L+H +G +AIE I LD  +    +L+ + F+ M+ L+
Sbjct: 524 HEESSR---KGSRLWHREDMNHALRHKQGVEAIETIVLDSKEHGESHLNAKFFSAMTGLK 580

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
           + + +                       V L   L+YL  KLR L W  YP R LPS+FK
Sbjct: 581 VLRVH----------------------NVFLSGVLEYLSNKLRLLSWHGYPFRNLPSDFK 618

Query: 416 PKNLVELNLRCSKVEQPW-EGEK---------------------ACVPS----------- 442
           P  L+ELNL+ S +E  W E EK                     + VP+           
Sbjct: 619 PSELLELNLQNSCIENIWRETEKLDKLKVINLSNSKFLLKTPDLSTVPNLERLVLNGCTR 678

Query: 443 ------SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK--- 493
                 S+   K+L  L  K C+SL+S  SN+       +  S C  L  FP+I G    
Sbjct: 679 LQELHQSVGTLKHLIFLDLKDCKSLKSICSNISLESLKILILSGCSRLENFPEIVGNMKL 738

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           V  L+L  +AI ++  SI  LT L +LDLR CK L+ +  +   L S+  L L GC  L+
Sbjct: 739 VKELHLDGTAIRKLHVSIGKLTSLVLLDLRYCKNLRTLPNAIGCLTSIEHLALGGCSKLD 798

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
             P+ L  +  LK++    T I+ +P +   L  LEVL  E  S+          L Y  
Sbjct: 799 KIPDSLGNISCLKKLDVSGTSISHIPFTLRLLKNLEVLNCEGLSR---------KLCYSL 849

Query: 614 YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV--R 671
           ++L +       P +          ++SH  GL  +  T L   S++ +L+ SD  +   
Sbjct: 850 FLLWST------PRN----------NNSHSFGL--WLITCLTNFSSVKVLNFSDCKLVDG 891

Query: 672 EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
           +IP +++ LSSL  L LS N F +LP  + Q+  LR + L++ + L+SLP+ P+ L Y+ 
Sbjct: 892 DIPDDLSCLSSLHFLDLSRNLFTNLPHSLSQLINLRCLVLDNCSRLRSLPKFPVSLLYVL 951

Query: 732 LIDCKMLQ 739
             DC  L+
Sbjct: 952 ARDCVSLK 959



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 160/341 (46%), Gaps = 41/341 (12%)

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
           L L  S IE +    E L  L+V++L   K L + +     + +L  L+L GC  L+   
Sbjct: 625 LNLQNSCIENIWRETEKLDKLKVINLSNSKFLLK-TPDLSTVPNLERLVLNGCTRLQELH 683

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFEN--LPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
           + +  ++HL  I+ D      L S   N  L  L++L +  CS+L+N P+ +G+++ +  
Sbjct: 684 QSVGTLKHL--IFLDLKDCKSLKSICSNISLESLKILILSGCSRLENFPEIVGNMKLVKE 741

Query: 615 ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAVRE 672
           +    +AI +L  S+     L  LD  +CK L + P     L  +  + L   S   + +
Sbjct: 742 LHLDGTAIRKLHVSIGKLTSLVLLDLRYCKNLRTLPNAIGCLTSIEHLALGGCS--KLDK 799

Query: 673 IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN--------MLQSLPE-- 722
           IP  +  +S L+ L +SG +   +P  ++ +  L  ++ E  +        +L S P   
Sbjct: 800 IPDSLGNISCLKKLDVSGTSISHIPFTLRLLKNLEVLNCEGLSRKLCYSLFLLWSTPRNN 859

Query: 723 --------LPLCL------KYLHLIDCKMLQS-LPVLPFCLESL---DLTG---CNMLRS 761
                   L  CL      K L+  DCK++   +P    CL SL   DL+     N+  S
Sbjct: 860 NSHSFGLWLITCLTNFSSVKVLNFSDCKLVDGDIPDDLSCLSSLHFLDLSRNLFTNLPHS 919

Query: 762 LPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQ 802
           L +L + L+ L L++C+ LRSLP+ P+ L  +  R+C  L+
Sbjct: 920 LSQL-INLRCLVLDNCSRLRSLPKFPVSLLYVLARDCVSLK 959



 Score = 42.7 bits (99), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 21/218 (9%)

Query: 631 LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
           LSN LR L S H     + P  F    S +  L++ +  +  I +E   L  L+++ LS 
Sbjct: 596 LSNKLRLL-SWHGYPFRNLPSDF--KPSELLELNLQNSCIENIWRETEKLDKLKVINLSN 652

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLK---YLHLIDCKMLQSLPVLPFC 747
           + F      +  +  L  + L     LQ L +    LK   +L L DCK L+S+      
Sbjct: 653 SKFLLKTPDLSTVPNLERLVLNGCTRLQELHQSVGTLKHLIFLDLKDCKSLKSI-CSNIS 711

Query: 748 LESLD---LTGCNMLRSLPELPLCLQY---LNLEDCNMLR---SLPELPLCLQLLTVRNC 798
           LESL    L+GC+ L + PE+   ++    L+L+   + +   S+ +L   L LL +R C
Sbjct: 712 LESLKILILSGCSRLENFPEIVGNMKLVKELHLDGTAIRKLHVSIGKLT-SLVLLDLRYC 770

Query: 799 NRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESL 836
             L++LP  + CL  ++   L   SK    L   P+SL
Sbjct: 771 KNLRTLPNAIGCLTSIEHLALGGCSK----LDKIPDSL 804


>gi|227438245|gb|ACP30612.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 886

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 234/685 (34%), Positives = 343/685 (50%), Gaps = 112/685 (16%)

Query: 20  KTTLAKAIFDQFS----HEFEGSCFVSDVRG----NSETAGGLE-HLQKQMLSTTLSEKL 70
           KTT+A+A++ Q S      F+ + F+ +V+G    N      L+ HLQ++ LS   +++ 
Sbjct: 230 KTTIARALYSQLSAAADDNFQLNIFMENVKGSCRRNELDGYSLKLHLQERFLSEIFNKR- 288

Query: 71  EVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRV 128
                 I H    +ER++  K LIVLDDV+E+ QL  L  +   FG G+RI+VTT DK++
Sbjct: 289 ---DIKISHLGVAQERLKNQKALIVLDDVDELQQLHALADQTQWFGNGTRIIVTTEDKQL 345

Query: 129 LEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV-VSYTKGN-PLVL 186
           L K  G    +Y V     +EAF+  C +AF +N  PE   ++  +V VS   GN PL L
Sbjct: 346 L-KAHGISH-VYEVGFPSKDEAFKILCRYAFGQNSAPE--GFYDLAVEVSQLSGNLPLSL 401

Query: 187 EVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFE 246
            VLG+SL    K  W K L  L      +I  +   L + ++ L  + + IFL IAC F 
Sbjct: 402 SVLGASLRGVSKEEWTKALPRLRTSLNGKIEKV---LGVCYDSLDEKDRLIFLHIACLFN 458

Query: 247 GEDKDFVASILDDSESDV---LDILIDKSLVSI--SGNFLNMHDILQEMGRQIVRQESEK 301
           GE  + V   L  SE +V   L +L+D+SL+ I   GN + MH +LQ+MG++I+R +   
Sbjct: 459 GEKVERVIQFLAKSELEVEFGLKVLVDRSLLHICDDGNIV-MHCLLQQMGKEIIRGQCID 517

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLFKFY 360
           EPGKR  L D K+IS VL    GT+ + GI LD+SKI   + +  +AF  M NL+  + Y
Sbjct: 518 EPGKRKFLVDAKDISDVLVDATGTETVLGISLDMSKINDDVCISEKAFDRMHNLQFLRLY 577

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                         T  Q    K+ LP+GLD LP KLR LHWD+YP++ +PS F+P+ LV
Sbjct: 578 --------------TNFQDESFKLCLPHGLDRLPHKLRLLHWDSYPIKCMPSRFRPEFLV 623

Query: 421 ELNLRCSKVEQPWEG------------------------------EK---------ACVP 441
           EL++R SK+E+ WEG                              EK         A VP
Sbjct: 624 ELSMRDSKLEKLWEGIQPLTSLKQMDLSASTKIKDIPNLSKATNLEKLYLRFCKALASVP 683

Query: 442 SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ 501
           SS+QN   L  L    C  L + P+N++      +N   C  L  FP+IS +V  + +G+
Sbjct: 684 SSLQNLNKLKVLDMSSCVRLNALPTNMNLESLSVLNMKGCSKLRIFPEISSQVKFMSVGE 743

Query: 502 SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
           +AIEEVP SI     L  L++ GCK+LK    +F KL + V ++ L              
Sbjct: 744 TAIEEVPLSISLWPQLISLEMSGCKKLK----TFPKLPASVEVLDLS------------- 786

Query: 562 MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAAS 620
                      T I E+P   EN   L ++ + +C KL  +P +I  +++L  + L+  S
Sbjct: 787 ----------STGIEEIPWGIENASQLLIMCMANCKKLKCVPPSIYKMKHLEDVDLSGCS 836

Query: 621 AISQLPSSVALSNMLRSLDSSHCKG 645
            +  L SS       +     +C G
Sbjct: 837 ELRPLLSSRVFEKCRKRNTKKNCNG 861



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 51/270 (18%)

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           +  L +  S +E++   I+ LT L+ +DL    ++K I  +  K  +L  L L  C  L 
Sbjct: 622 LVELSMRDSKLEKLWEGIQPLTSLKQMDLSASTKIKDI-PNLSKATNLEKLYLRFCKALA 680

Query: 554 HFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
             P  L+ +  LK +  S    +  LP++  NL  L VL ++ CSKL   P+    ++++
Sbjct: 681 SVPSSLQNLNKLKVLDMSSCVRLNALPTNM-NLESLSVLNMKGCSKLRIFPEISSQVKFM 739

Query: 613 YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
                  +AI ++P S++L   L SL+ S CK L++FP+                     
Sbjct: 740 S---VGETAIEEVPLSISLWPQLISLEMSGCKKLKTFPK--------------------- 775

Query: 673 IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
           +P      +S+E+L LS    E +P  I+  SQL  + + +   L+ +P  P   K  H 
Sbjct: 776 LP------ASVEVLDLSSTGIEEIPWGIENASQLLIMCMANCKKLKCVP--PSIYKMKH- 826

Query: 733 IDCKMLQSLPVLPFCLESLDLTGCNMLRSL 762
                          LE +DL+GC+ LR L
Sbjct: 827 ---------------LEDVDLSGCSELRPL 841


>gi|227438197|gb|ACP30588.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1108

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 214/595 (35%), Positives = 300/595 (50%), Gaps = 88/595 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S    IVG+WGM GIGKTT+++ IF   +  ++   F+ D     +T G L HL+ +  S
Sbjct: 410 SSAPHIVGLWGMAGIGKTTISREIFRTQAERYDVCYFLPDFHIVCQTRG-LSHLRDEFFS 468

Query: 64  T-TLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             +  EK+ V   +    F ++R    K+LIVLD V+   + + L+G    F  G  +++
Sbjct: 469 IISGEEKVTVGACDTKLGFIRDRFLSKKVLIVLDGVSNAREAEFLLGGFGWFSGGHTLIL 528

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS-----VV 176
           T+R+++VL   +   K+IY +  L   E+  H C+    E        W  R+     +V
Sbjct: 529 TSRNRQVL--IQCNAKEIYEIQNLSEHESL-HLCSQFVSEQI------WTGRTPLVSELV 579

Query: 177 SYTKGNPLVLEVLGSSL---CLK-RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
            Y  G PL L  LGSSL   C+   K H       L R+ +  + +I D  K SFN L  
Sbjct: 580 YYASGIPLALCALGSSLQNQCIDDEKQH-------LKRLRQHPLVEIQDAFKRSFNVLDS 632

Query: 233 RVKSIFLDIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQ 288
             K+ FLD ACFF G +KD V +ILD     +E  +  +L D+SL+S+ GN +   +I Q
Sbjct: 633 NEKNTFLDFACFFRGGNKDHVVNILDGCGFLTELGIYGLL-DESLISLVGNRIETPNIFQ 691

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
           + GR +VRQE+  E GKRSRLWDP +I  VL +N GT+AIEGIFLD S +    L P AF
Sbjct: 692 DAGRFVVRQEN-NERGKRSRLWDPTDIVDVLTNNSGTEAIEGIFLDASCLT-FELSPTAF 749

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M  LRL K Y P                 +  KV LP GL  LP +LR LHW+ YPL 
Sbjct: 750 EKMYRLRLLKLYCPT--------------SDNSCKVSLPQGLYSLPDELRLLHWERYPLG 795

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEK------------------------------- 437
           +LP NF PKN+VELN+  S + + W+G K                               
Sbjct: 796 SLPRNFNPKNIVELNMPYSNMTKLWKGTKNLEKLKRIILSHSRQLTKFPSLSKAKNLEHI 855

Query: 438 ---AC-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
               C     V SSI++ + L+ L+ K C  LRS P+ +H      +N S C  L +   
Sbjct: 856 DLEGCTSLVKVNSSIRHHQKLTFLTLKDCSRLRSMPATVHLEALEVLNLSGCSELEDLQD 915

Query: 490 ISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
            S  ++ LYL  +AI E+PSSI  LT L  LDL  C  L+ +      L+++V+L
Sbjct: 916 FSPNLSELYLAGTAITEMPSSIGGLTRLVTLDLENCNELQHLPPEISNLKAVVSL 970



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 4/147 (2%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +T+L    +NL  L+ + +    +L   P    +    +  L   +++ ++ SS+     
Sbjct: 816 MTKLWKGTKNLEKLKRIILSHSRQLTKFPSLSKAKNLEHIDLEGCTSLVKVNSSIRHHQK 875

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFE 694
           L  L    C  L S P T  + L A+ +L++S  +  E  Q+ +   +L  LYL+G    
Sbjct: 876 LTFLTLKDCSRLRSMPAT--VHLEALEVLNLSGCSELEDLQDFS--PNLSELYLAGTAIT 931

Query: 695 SLPAIIKQMSQLRFIHLEDFNMLQSLP 721
            +P+ I  +++L  + LE+ N LQ LP
Sbjct: 932 EMPSSIGGLTRLVTLDLENCNELQHLP 958


>gi|357469153|ref|XP_003604861.1| Nbs-lrr resistance protein [Medicago truncatula]
 gi|355505916|gb|AES87058.1| Nbs-lrr resistance protein [Medicago truncatula]
          Length = 1897

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 210/600 (35%), Positives = 324/600 (54%), Gaps = 48/600 (8%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            + +S+ V ++GIWGMGG+GKTT+AKAI++Q   +F+G  F+ ++R   ET      LQ+Q
Sbjct: 736  IQNSEDVLLLGIWGMGGVGKTTIAKAIYNQIGRKFDGRSFLLNIREFCETDANHVSLQQQ 795

Query: 61   ML-----STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
            +L     +T    +   +G NI    KER+ + ++L+VLDDVNE+ QLK L G  + FG 
Sbjct: 796  ILCDVYKTTAFKIRDIESGKNI---LKERLAQNRVLLVLDDVNELDQLKALCGSREWFGP 852

Query: 116  GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
            GSRI++TTRD  +L   R +   +Y +  ++  E+ E F   AFK+    E    HS  V
Sbjct: 853  GSRIIITTRDMHLLRSSRVD--LVYTIEEMDESESLELFSWHAFKQPSPAEGFATHSTDV 910

Query: 176  VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV- 234
            ++Y+   PL LEVLG  L     + W KVL  L  I   E+      LK+SF+ L     
Sbjct: 911  IAYSGRLPLALEVLGCYLSDCEITEWQKVLEKLKCIPHDEVQKK---LKVSFDGLKDVTE 967

Query: 235  KSIFLDIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSISG-NFLNMHDILQEM 290
            + IFLDIACF  G DK+    IL+     +D+ + +L+++SLV++   N L MHD+L++M
Sbjct: 968  QQIFLDIACFLIGMDKNDAIKILNGCGFFADIGIKVLVERSLVTVDNRNKLRMHDLLRDM 1027

Query: 291  GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
            GRQI+ +ES  +P  RSRLW  +E+  VL   KGT+A++G+ L   +   + L+ +AF  
Sbjct: 1028 GRQIIYEESPFDPENRSRLWRREEVYDVLLKQKGTEAVKGLALVFPRKNKVCLNTKAFKK 1087

Query: 351  MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
            M+ LRL                      L  S VQL     YL  +LR+L+W  +PL   
Sbjct: 1088 MNKLRL----------------------LQLSGVQLNGDFKYLSGELRWLYWHGFPLTYT 1125

Query: 411  PSNFKPKNLVELNLRCSKVEQPW-EGEKACVPSSIQNFKYLSALSFKG----CQSLRSFP 465
            P+ F+  +L+ + L+ S ++Q W EG+       +   +   +    G     + L   P
Sbjct: 1126 PAEFQQGSLIVIQLKYSNLKQIWKEGQDVPTCDGMGGVEGPPSPHVVGSLVASEVLEVPP 1185

Query: 466  SNLHFVCPVTINFSYCVNLIEFPQIS--GKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDL 522
            ++        +N S+ ++L E P  S    + +L L    ++  V  SI  L  L +++L
Sbjct: 1186 ASRMLKNLKILNLSHSLDLTETPDFSYMPNLEKLVLKDCPSLSTVSHSIGSLHKLLLINL 1245

Query: 523  RGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
              C RL+++  S  KL+SL TLIL GC  ++   E LE+ME L  + +D+T IT++P S 
Sbjct: 1246 TDCIRLRKLPRSIYKLKSLETLILSGCSMIDKLEEDLEQMESLTTLIADKTAITKVPFSI 1305



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/288 (38%), Positives = 163/288 (56%), Gaps = 13/288 (4%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML----STTLSEKLEVAGP 75
           K+T+A+AI+DQ    FE    + +VR   +  GG   LQK++L     TT  + L +   
Sbjct: 252 KSTIAQAIYDQVGPYFEHKSLLKNVRTFWQQNGGQVSLQKKLLMAVNKTTEKKILHIESG 311

Query: 76  NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGE 135
            +    KER+R   +L++LDDVN++ QLK L G  D FG GS+I++ TRD+ +L +   +
Sbjct: 312 KV--ILKERLRHKSVLLILDDVNKLEQLKSLCGNRDWFGPGSKIIIITRDRHLLMEHGVD 369

Query: 136 EKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
              IY+V  LE  E+ E F   AF +   P+  +  SR +V+Y+KG PL L+ LG  L  
Sbjct: 370 H--IYKVKQLEESESIELFNWGAFSQATTPQGFSELSRQLVAYSKGLPLALKALGEFLHG 427

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           K    W +VL  L R    +  ++   L+ SF+ L    K IFLDIACFF G D+++V  
Sbjct: 428 KDALEWKRVLKSLERFSFPD-QEVLQALETSFDDLKDEEKHIFLDIACFFNGMDQNYVLR 486

Query: 256 ILDDS---ESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQES 299
            ++ S    S  + +L DKSL++I   N L MH +LQ M R I+++ES
Sbjct: 487 TINRSTQCTSLQISLLEDKSLLTIGENNKLEMHGLLQAMARDIIKRES 534


>gi|296089468|emb|CBI39287.3| unnamed protein product [Vitis vinifera]
          Length = 1166

 Score =  301 bits (771), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 255/734 (34%), Positives = 372/734 (50%), Gaps = 94/734 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNIP 78
           KTTLA+A++++ S +FE   F+ DV G      GL  LQ+  LS+ L EK L + G    
Sbjct: 280 KTTLARALYNEISRQFEAHSFLEDV-GKVLANEGLIKLQQIFLSSLLEEKDLNMKGLTS- 337

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K R+   K+L+VLD+VN+    + LIG  D FG+GSRI++T RDK ++         
Sbjct: 338 --IKARLHSKKVLVVLDNVNDPTIFECLIGNQDWFGRGSRIIITARDKCLI----SHGVD 391

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            Y V     +EA+E     + K      D    S S++ Y +G PL L+VL   L    K
Sbjct: 392 YYEVPKFNSDEAYEFIKCHSLKHELLRGDFMELSTSMIGYAQGLPLALKVLRPILFSMSK 451

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
                 L  L      +I ++   L+IS++ L  + K+IFLDIACFF+GEDKD+V  ILD
Sbjct: 452 EESRNQLDKLKSTLNKKIEEV---LRISYDGLDDKEKNIFLDIACFFKGEDKDYVIEILD 508

Query: 259 DSESDVL---DILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                 L     LIDKSL+SI GN   MHD++QEMG +IVRQ+S +E GKRSRL   ++I
Sbjct: 509 GCGFFPLCGIRSLIDKSLISIYGNKFQMHDLIQEMGLEIVRQQSLQELGKRSRLLFHEDI 568

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIK-GINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
             VLK N G++ IEGIFL+L  ++  I+   +AF  MS LRL      K Y+ +K+   S
Sbjct: 569 YDVLKKNTGSEKIEGIFLNLFHLQETIDFTTQAFAGMSKLRLL-----KVYQSDKISRNS 623

Query: 375 TEEQLSYS-KVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
            +  +  + KV+  +   +   +LRYL    Y L++LP++F  KNLV L++ CS++EQ W
Sbjct: 624 EDTFMKENFKVRFSSNFKFCYDELRYLDLYGYSLKSLPNDFNAKNLVHLSMPCSRIEQLW 683

Query: 434 EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
           +G            K L  L                      ++ S+   LIE P +S +
Sbjct: 684 KG-----------IKVLEKLK--------------------RMDLSHSKYLIETPNLS-R 711

Query: 494 VT---RLYLGQS-AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
           VT   RL L    ++ +V  S+  L +L+ L L+ CK LK + +    L+SL  LIL GC
Sbjct: 712 VTNLERLVLEDCVSLCKVHPSLRDLKNLKFLSLKNCKMLKSLPSGPYDLKSLEILILSGC 771

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
              E F E    +E LK +Y+D T + ELPSS      L +L +E C             
Sbjct: 772 SKFEQFLENFGNLEMLKELYADGTALRELPSSLSLSRNLVILSLEGCKG----------- 820

Query: 610 EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHIS--D 667
                           P S +     RS +S+       F    L GL ++  L++S  +
Sbjct: 821 ----------------PPSASWWFPRRSSNST------GFRLHNLSGLCSLSTLNLSYCN 858

Query: 668 YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCL 727
            +       +  LSSLE L+L GNNF +LP  + ++S+L  + LE+   LQ LP+LP  +
Sbjct: 859 LSDETNLSSLVLLSSLEYLHLCGNNFVTLPN-LSRLSRLEDVQLENCTRLQELPDLPSSI 917

Query: 728 KYLHLIDCKMLQSL 741
             L   +C  L+++
Sbjct: 918 GLLDARNCTSLKNV 931



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 168/429 (39%), Gaps = 82/429 (19%)

Query: 513 CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSD 571
           C  +L  LDL G   LK +   F   ++LV L +  C  +E   + ++ +E LKR+  S 
Sbjct: 643 CYDELRYLDLYGYS-LKSLPNDF-NAKNLVHLSM-PCSRIEQLWKGIKVLEKLKRMDLSH 699

Query: 572 RTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVA 630
              + E P+    +  LE L +EDC  L  +  ++  L+ L ++ L     +  LPS   
Sbjct: 700 SKYLIETPN-LSRVTNLERLVLEDCVSLCKVHPSLRDLKNLKFLSLKNCKMLKSLPSGPY 758

Query: 631 LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
               L  L  S C   E F   F   L  +  L+    A+RE+P  ++   +L IL L G
Sbjct: 759 DLKSLEILILSGCSKFEQFLENFG-NLEMLKELYADGTALRELPSSLSLSRNLVILSLEG 817

Query: 691 NNFESLPA--IIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCL 748
                  +    ++ S      L + + L SL  L L   Y +L D +   S  VL   L
Sbjct: 818 CKGPPSASWWFPRRSSNSTGFRLHNLSGLCSLSTLNL--SYCNLSD-ETNLSSLVLLSSL 874

Query: 749 ESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEIL 808
           E L L G N + +LP L    +   LED  +                 NC RLQ LP++ 
Sbjct: 875 EYLHLCGNNFV-TLPNLS---RLSRLEDVQL----------------ENCTRLQELPDLP 914

Query: 809 LCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIR 868
             +  LDA                              NC  L           S L+ R
Sbjct: 915 SSIGLLDAR-----------------------------NCTSLKN-------VQSHLKNR 938

Query: 869 HMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNL 928
            + + +L LG                 + PGS +PDW   +SSG  +  +LPP+    N 
Sbjct: 939 VIRVLNLVLGL--------------YTLTPGSRLPDWIRYKSSGMEVIAELPPNWFNSNF 984

Query: 929 IGFAFCAVL 937
           +GF F  V+
Sbjct: 985 LGFWFAIVV 993


>gi|82542037|gb|ABB82026.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1070

 Score =  301 bits (770), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 242/755 (32%), Positives = 367/755 (48%), Gaps = 116/755 (15%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           ++D V+I GI GM GIGKTT+AK +F+Q  + FEGSCF+S++   S+   GL  LQKQ+L
Sbjct: 209 ATDDVRIAGIHGMPGIGKTTIAKVVFNQLCYGFEGSCFLSNINETSKQLNGLALLQKQLL 268

Query: 63  STTLSEKLEVAGPNIPH----FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
              L  K +VA  N         +ER+   ++L+V DDV    QL  L+G+   FG GSR
Sbjct: 269 HDIL--KQDVANINNVDRGKVLIRERLCCKRVLVVADDVARQDQLNALMGQRSWFGPGSR 326

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRD  +L K      + Y++  L  +++ + F   AFK+    ED    S+  V Y
Sbjct: 327 VIMTTRDSNLLRK----ADRTYQIEELTRDQSLQLFSWHAFKDTKPAEDYIELSKDAVDY 382

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL-TPRVKSI 237
             G PL LEV+G+ L  + K  W   +  L RI +   HDI   L+ISF+ L    +++ 
Sbjct: 383 CGGLPLALEVIGACLSGEEKYIWKSEIDKLRRIPK---HDIQGKLRISFDALDGEELQNA 439

Query: 238 FLDIACFFEGEDKDFVASILD-----DSESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
           FLDIACFF   +K+++  +L      D E D L  L  +SL+ + G  + MHD+L++MGR
Sbjct: 440 FLDIACFFIDIEKEYITKVLGARCSYDPEID-LKTLRKRSLIKVLGGTITMHDLLRDMGR 498

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           ++VR+ S KEPGKR+R+W+ ++   VL+  KGTD +EG+ LD+   +  +L   +F  M 
Sbjct: 499 EVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDVRASEAKSLSAGSFAKMK 558

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            L L                      L  + V L   L  L K L ++ W   PL+  PS
Sbjct: 559 RLNL----------------------LQINGVHLTGSLKLLSKVLMWICWHECPLKYFPS 596

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           +    NL  L+++ S +++ W+GEK            L+ L                   
Sbjct: 597 DITLDNLAVLDMQYSNLKELWKGEKI-----------LNKLKI----------------- 628

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
              IN S+  NL++ P          L  S++E++   +E  + L    ++GC RLK + 
Sbjct: 629 ---INLSHSQNLVKTPN---------LHSSSLEKLI--LEGCSSL----VKGCWRLKILP 670

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
            S   ++SL ++ + GC  LE  PE ++ ME L  + +D     +  SS   L  +  L 
Sbjct: 671 ESIGNVKSLKSMNISGCSQLEKLPEHMDDMESLIELLADGIENEQFLSSIRQLKYIRRLS 730

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE-SFPR 651
           +   +   N P               +S     PSS      + S  S+    L+ S P+
Sbjct: 731 LRGYNFSQNSP---------------SSTFWLSPSSTFWPPSISSFISASVLCLKRSLPK 775

Query: 652 TFL-------LGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
            F+       L L   GL   SD+    +  +   LSSLE+L LS N F SLP+ I  + 
Sbjct: 776 AFIDWRLVKSLELPDAGL---SDHTTNCV--DFRGLSSLEVLDLSRNKFSSLPSGIAFLP 830

Query: 705 QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ 739
            L  + +   N L S+P+LP  L YL    CK L+
Sbjct: 831 NLGSLIVVGCNNLVSIPDLPSNLGYLGATYCKSLE 865


>gi|15223444|ref|NP_174038.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332192670|gb|AEE30791.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1556

 Score =  301 bits (770), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 312/1098 (28%), Positives = 476/1098 (43%), Gaps = 202/1098 (18%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEF-EGSCFVSDVRGNSETAGGLEHLQKQ 60
            +SS  +Q++G++GMGGIGKTTLAKA +++    F     F+  VRG S    GL +LQK 
Sbjct: 379  ESSSGIQVMGLYGMGGIGKTTLAKAFYNKIIVNFNRHRVFIESVRGKSSDQDGLVNLQKT 438

Query: 61   MLSTTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
            ++        E+   +I     KE V   K+++VLDDV+ + Q+  L+GE   +G+GS I
Sbjct: 439  LIKELFRLVPEIEDVSIGLEKIKENVHEKKIIVVLDDVDHIDQVNALVGETSWYGEGSLI 498

Query: 120  VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVSY 178
            V+TTRD  +L K    ++  Y V  L   +A + F  ++ ++   P + L   S+ +   
Sbjct: 499  VITTRDSEILSKLSVNQQ--YEVKCLTEPQALKLFSFYSLRKEKPPTQGLLELSKKIAEV 556

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
            T   PL ++V GS    K ++ W   L  L    +++   ++ +L +SF  L    K IF
Sbjct: 557  TGLLPLAVKVFGSHFYDKDENEWQVELEKL----KTQQDKLHGVLALSFKSLDEEEKKIF 612

Query: 239  LDIACFFEGED--KDFVASILDD---SESDVLDILIDKSLVSI-SGNFLNMHDILQEMGR 292
            LDIAC F   D  K+ V  IL     +    L +LI KSL++I + + L MHD +++MGR
Sbjct: 613  LDIACLFLKMDITKEEVVDILKGCGLNAEAALRVLIQKSLLTILTDDTLWMHDQIRDMGR 672

Query: 293  QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK----------IKGIN 342
            Q+V +ES  +P  RSRLWD  EI  VL + KGT +I GI LD +K          I   N
Sbjct: 673  QMVHKESSDDPEMRSRLWDRGEIMNVLDYMKGTSSIRGIVLDFNKKFARDHTADEIFSSN 732

Query: 343  L--DPRAFTNMSNLR--LFKFYV---PKFYEI----EKLPSMSTEEQLSYSKVQLPNGLD 391
            L  +P  ++  + L+  L +F     PK  EI    E    M     L  + V+L   L 
Sbjct: 733  LRNNPGIYSVFNYLKNKLVRFPAEEKPKRSEITIPVESFAPMKKLRLLQINNVELEGDLK 792

Query: 392  YLPKKLRYLHWDTYPL-------------------------RTLPSNFKPKNLVELNLR- 425
             LP +L+++ W  +PL                         +TLP     +NL  +NLR 
Sbjct: 793  LLPSELKWIQWKGFPLENLPPDILSRQLGVLDLSESGVRRVKTLPRKRGDENLKVVNLRG 852

Query: 426  CSKVEQ--PWEGEKAC-------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
            C  +E         A              VP S+ N   L  L  + C SL  F  ++  
Sbjct: 853  CHGLEAIPDLSNHNALEKLVLERCNLLVKVPRSVGNLGKLLQLDLRRCSSLSEFLGDVSG 912

Query: 471  V-CPVTINFSYCVNLIEFPQISGKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCK 526
            + C      S C NL   P+  G +     L L  +AI  +P SI  L  LE L L GC+
Sbjct: 913  LKCLEKFFLSGCSNLSVLPENIGSMPCLKELLLDGTAISNLPYSIFRLQKLEKLSLMGCR 972

Query: 527  R-----------------------LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKME 563
                                    L+ + +S   L++L  L L+ C +L   PE + K+ 
Sbjct: 973  SIEELPSCVGYLTSLEDLYLDDTALRNLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLM 1032

Query: 564  HLKRIYS-----------------------------------------------DRTPIT 576
             LK ++                                                D TPI 
Sbjct: 1033 SLKELFINGSAVEELPIETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQLDSTPIE 1092

Query: 577  ELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
             LP    +L  +  L + +C  L  LP  IG ++ LY +    S I +LP        L 
Sbjct: 1093 ALPEEIGDLHFIRQLDLRNCKSLKALPKTIGKMDTLYSLNLVGSNIEELPEEFGKLENLV 1152

Query: 637  SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL-YLSGNNFES 695
             L  ++CK L+  P++F   L ++  L++ +  V E+P+    LS+L +L  L    F  
Sbjct: 1153 ELRMNNCKMLKRLPKSF-GDLKSLHRLYMQETLVAELPESFGNLSNLMVLEMLKKPLFRI 1211

Query: 696  LPAIIKQMSQL-RFIHLED-FNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDL 753
              + +   S+  RF+ + + F+ L  L EL  C      I  K+   L  L  CL  L+L
Sbjct: 1212 SESNVPGTSEEPRFVEVPNSFSKLLKLEELDAC---SWRISGKIPDDLEKLS-CLMKLNL 1267

Query: 754  TGCNMLRSLPELPL---CLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
             G N   SLP   +    LQ L+L DC  L+ LP LP  L+ L + NC  L+S+ +    
Sbjct: 1268 -GNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSD---- 1322

Query: 811  LQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHM 870
            L EL  ++L  L+                      TNC K+          + L  ++ +
Sbjct: 1323 LSEL--TILTDLN---------------------LTNCAKVVDIPG----LEHLTALKRL 1355

Query: 871  AIASLRLGYEMAINEKLSELRGSL---IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRN 927
             +      Y +A+ ++LS+    +   + LPG+ +PDWFS       +     P+   R 
Sbjct: 1356 YMTGCNSNYSLAVKKRLSKASLKMMRNLSLPGNRVPDWFSQ----GPVTFSAQPNRELRG 1411

Query: 928  LIGFAFCAVLDSKKVDSD 945
            +I  A    L+ +  D D
Sbjct: 1412 VI-IAVVVALNDETEDDD 1428


>gi|357469181|ref|XP_003604875.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505930|gb|AES87072.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 880

 Score =  301 bits (770), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 220/622 (35%), Positives = 337/622 (54%), Gaps = 81/622 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + +S+ V ++GIWGMGG+GKTTLAKAI++Q   +FEG  F+ ++R   ET      LQ+Q
Sbjct: 198 IQNSNDVLLLGIWGMGGLGKTTLAKAIYNQIGIKFEGRSFLLNIREVWETDTNQVSLQQQ 257

Query: 61  ML----STTLSEKLEV-AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           +L     TT  + L++ +G N+    KER+ + ++L+VLDDVN++ QLK L G    FG 
Sbjct: 258 ILCDVYKTTELKILDIESGKNL---LKERLAQKRVLLVLDDVNKLDQLKALCGSRKWFGP 314

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           GSR+++TTRD R+L   R +   +Y V  ++  E+ E FC  AFK+   PE    HSR V
Sbjct: 315 GSRVIITTRDMRLLRSCRVD--LVYTVVEMDERESLELFCWHAFKQPCPPEGFATHSRDV 372

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV- 234
           + Y+ G PL L+VLGS L     + W KVL  L  I   ++      LK+SF+ L     
Sbjct: 373 IVYSGGLPLALQVLGSYLSGCETTEWQKVLEKLKCIPHDQVQKK---LKVSFDGLKDVTE 429

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSIS-GNFLNMHDILQEM 290
           K IF DIACFF G DK+ +  IL+      D+ +++L+ +SLV++  GN L MHD+L++M
Sbjct: 430 KQIFFDIACFFIGMDKNDIIQILNGCGYFGDIGIEVLVQQSLVTVDIGNKLRMHDLLRDM 489

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
           GRQIV +ES   P  RSRLW  +E+  +L ++KGT+A++G+ L+    + + L+ ++F  
Sbjct: 490 GRQIVYEESPFHPEMRSRLWFREEVFDMLSNHKGTEAVKGLALEFP--REVCLETKSFKK 547

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M+ LRL +                       + V+L     YL   L++L+W  +P   +
Sbjct: 548 MNKLRLLRL----------------------AGVKLKGDFKYLSGDLKWLYWHGFPETYV 585

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
           P+ F+  +LV + L+ SK++Q W   +      ++N K L                    
Sbjct: 586 PAEFQLGSLVVMELKYSKLKQIWNKSQM-----LENLKVL-------------------- 620

Query: 471 VCPVTINFSYCVNLIEFPQIS--GKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKR 527
                 N S+ ++L E P  S    + +L L    ++  V  SI  L  + +++L  C  
Sbjct: 621 ------NLSHSLDLTETPDFSYMPNLEKLILEDCPSLSTVSHSIGSLHKILLINLTDCTG 674

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
           L+ +  S  KL+SL TLIL GC  L+   E LE+ME L  + +D+T I E+PSS   LP 
Sbjct: 675 LRTLPKSIYKLKSLATLILSGCSMLDKL-EDLEQMESLTTLIADKTAIPEVPSS---LPK 730

Query: 588 LEVLFVEDCSKLDNLPDNIGSL 609
           +  +F+    + DN P  I  L
Sbjct: 731 MYDVFLSFRGE-DNRPRFISHL 751


>gi|10121909|gb|AAG13419.1|AC000348_16 T7N9.24 [Arabidopsis thaliana]
          Length = 1590

 Score =  301 bits (770), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 312/1098 (28%), Positives = 476/1098 (43%), Gaps = 202/1098 (18%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEF-EGSCFVSDVRGNSETAGGLEHLQKQ 60
            +SS  +Q++G++GMGGIGKTTLAKA +++    F     F+  VRG S    GL +LQK 
Sbjct: 413  ESSSGIQVMGLYGMGGIGKTTLAKAFYNKIIVNFNRHRVFIESVRGKSSDQDGLVNLQKT 472

Query: 61   MLSTTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
            ++        E+   +I     KE V   K+++VLDDV+ + Q+  L+GE   +G+GS I
Sbjct: 473  LIKELFRLVPEIEDVSIGLEKIKENVHEKKIIVVLDDVDHIDQVNALVGETSWYGEGSLI 532

Query: 120  VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVSY 178
            V+TTRD  +L K    ++  Y V  L   +A + F  ++ ++   P + L   S+ +   
Sbjct: 533  VITTRDSEILSKLSVNQQ--YEVKCLTEPQALKLFSFYSLRKEKPPTQGLLELSKKIAEV 590

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
            T   PL ++V GS    K ++ W   L  L    +++   ++ +L +SF  L    K IF
Sbjct: 591  TGLLPLAVKVFGSHFYDKDENEWQVELEKL----KTQQDKLHGVLALSFKSLDEEEKKIF 646

Query: 239  LDIACFFEGED--KDFVASILDD---SESDVLDILIDKSLVSI-SGNFLNMHDILQEMGR 292
            LDIAC F   D  K+ V  IL     +    L +LI KSL++I + + L MHD +++MGR
Sbjct: 647  LDIACLFLKMDITKEEVVDILKGCGLNAEAALRVLIQKSLLTILTDDTLWMHDQIRDMGR 706

Query: 293  QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK----------IKGIN 342
            Q+V +ES  +P  RSRLWD  EI  VL + KGT +I GI LD +K          I   N
Sbjct: 707  QMVHKESSDDPEMRSRLWDRGEIMNVLDYMKGTSSIRGIVLDFNKKFARDHTADEIFSSN 766

Query: 343  L--DPRAFTNMSNLR--LFKFYV---PKFYEI----EKLPSMSTEEQLSYSKVQLPNGLD 391
            L  +P  ++  + L+  L +F     PK  EI    E    M     L  + V+L   L 
Sbjct: 767  LRNNPGIYSVFNYLKNKLVRFPAEEKPKRSEITIPVESFAPMKKLRLLQINNVELEGDLK 826

Query: 392  YLPKKLRYLHWDTYPL-------------------------RTLPSNFKPKNLVELNLR- 425
             LP +L+++ W  +PL                         +TLP     +NL  +NLR 
Sbjct: 827  LLPSELKWIQWKGFPLENLPPDILSRQLGVLDLSESGVRRVKTLPRKRGDENLKVVNLRG 886

Query: 426  CSKVEQ--PWEGEKAC-------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
            C  +E         A              VP S+ N   L  L  + C SL  F  ++  
Sbjct: 887  CHGLEAIPDLSNHNALEKLVLERCNLLVKVPRSVGNLGKLLQLDLRRCSSLSEFLGDVSG 946

Query: 471  V-CPVTINFSYCVNLIEFPQISGKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCK 526
            + C      S C NL   P+  G +     L L  +AI  +P SI  L  LE L L GC+
Sbjct: 947  LKCLEKFFLSGCSNLSVLPENIGSMPCLKELLLDGTAISNLPYSIFRLQKLEKLSLMGCR 1006

Query: 527  R-----------------------LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKME 563
                                    L+ + +S   L++L  L L+ C +L   PE + K+ 
Sbjct: 1007 SIEELPSCVGYLTSLEDLYLDDTALRNLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLM 1066

Query: 564  HLKRIYS-----------------------------------------------DRTPIT 576
             LK ++                                                D TPI 
Sbjct: 1067 SLKELFINGSAVEELPIETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQLDSTPIE 1126

Query: 577  ELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
             LP    +L  +  L + +C  L  LP  IG ++ LY +    S I +LP        L 
Sbjct: 1127 ALPEEIGDLHFIRQLDLRNCKSLKALPKTIGKMDTLYSLNLVGSNIEELPEEFGKLENLV 1186

Query: 637  SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL-YLSGNNFES 695
             L  ++CK L+  P++F   L ++  L++ +  V E+P+    LS+L +L  L    F  
Sbjct: 1187 ELRMNNCKMLKRLPKSF-GDLKSLHRLYMQETLVAELPESFGNLSNLMVLEMLKKPLFRI 1245

Query: 696  LPAIIKQMSQL-RFIHLED-FNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDL 753
              + +   S+  RF+ + + F+ L  L EL  C      I  K+   L  L  CL  L+L
Sbjct: 1246 SESNVPGTSEEPRFVEVPNSFSKLLKLEELDAC---SWRISGKIPDDLEKLS-CLMKLNL 1301

Query: 754  TGCNMLRSLPELPL---CLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
             G N   SLP   +    LQ L+L DC  L+ LP LP  L+ L + NC  L+S+ +    
Sbjct: 1302 -GNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSD---- 1356

Query: 811  LQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHM 870
            L EL  ++L  L+                      TNC K+          + L  ++ +
Sbjct: 1357 LSEL--TILTDLN---------------------LTNCAKVVDIPG----LEHLTALKRL 1389

Query: 871  AIASLRLGYEMAINEKLSELRGSL---IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRN 927
             +      Y +A+ ++LS+    +   + LPG+ +PDWFS       +     P+   R 
Sbjct: 1390 YMTGCNSNYSLAVKKRLSKASLKMMRNLSLPGNRVPDWFSQ----GPVTFSAQPNRELRG 1445

Query: 928  LIGFAFCAVLDSKKVDSD 945
            +I  A    L+ +  D D
Sbjct: 1446 VI-IAVVVALNDETEDDD 1462


>gi|359493225|ref|XP_002264620.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1448

 Score =  301 bits (770), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 208/589 (35%), Positives = 309/589 (52%), Gaps = 68/589 (11%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+AI+++ S++++ S F+ ++R  S+  G    LQ ++L   L EK      NI  
Sbjct: 229 KTTIAEAIYNKISYQYDSSSFLRNIREKSQ--GDTLQLQNELLHDILKEK-GFKISNIDE 285

Query: 80  ---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
                K  +   ++L++LDDV+++ QLK L  + D F   S I++T+RDK+VL ++  + 
Sbjct: 286 GVTMIKRCLNSKRVLVILDDVDDLKQLKHLAEKKDWFNAKSTIIITSRDKQVLARYGVDT 345

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
              Y V   + +EA E F  +AF+EN   E     S +++ Y  G PL L++LG+SL  K
Sbjct: 346 P--YEVQKFDKKEAIELFSLWAFQENLPKEAYENLSYNMIEYADGLPLALKLLGASLFGK 403

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
           + S W   L+ L RI   EI+ +   L+ISF+ L    K IFLD+ACFF+G+ KDFV+ I
Sbjct: 404 KISEWESALYKLKRIPHMEINKV---LRISFDGLDDMDKEIFLDVACFFKGKSKDFVSRI 460

Query: 257 LDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
           L       +  L DK L++IS N ++MHD++Q+MG++I+RQE   + G+RSR+WD  +  
Sbjct: 461 LGPHAEYGIATLNDKCLITISKNMMDMHDLIQQMGKEIIRQECPDDLGRRSRIWD-SDAY 519

Query: 317 RVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTE 376
            VL  N GT +I+G+FLD+ K         +F  M  LRL K +    Y      S   +
Sbjct: 520 DVLTRNMGTRSIKGLFLDICKFP-TQFTKESFKQMDRLRLLKIHKDDEYGCISRFSRHLD 578

Query: 377 EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE 436
            +L +S+  LP   ++   +L Y HWD Y L +LP+NF  K+LVEL LR S ++Q W G 
Sbjct: 579 GKL-FSEDHLPRDFEFPSYELTYFHWDGYSLESLPTNFHAKDLVELILRGSNIKQLWRGN 637

Query: 437 KACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR 496
           K                              LH    V IN S+ V+L E P  S     
Sbjct: 638 K------------------------------LHNKLNV-INLSHSVHLTEIPDFSS---- 662

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
                     VP       +LE+L L+GC +L+ +     K + L TL    C  L+ FP
Sbjct: 663 ----------VP-------NLEILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFP 705

Query: 557 EILEKMEHLKRIYSDRTPITELP--SSFENLPGLEVLFVEDCSKLDNLP 603
           EI   M  L+ +    T I ELP  SSF +L  L++L    CSKL+ +P
Sbjct: 706 EIKGNMRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIP 754



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 94/251 (37%), Positives = 140/251 (55%), Gaps = 10/251 (3%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S ++E+P  IE   +L+ L LRGCK LK + +S C+ +SL TL   GC  LE FPEILE 
Sbjct: 986  SDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILED 1044

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAAS 620
            ME LK++    + I E+PSS + L GL+ L +  C  L NLP++I +L  L  + + +  
Sbjct: 1045 MEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCP 1104

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAVREIPQEIA 678
             + +LP ++     L+SL+  + K  +S       L GL ++ +L + +  +REIP  I 
Sbjct: 1105 ELKKLPENLG---RLQSLEILYVKDFDSMNCQLPSLSGLCSLRILRLINCGLREIPSGIC 1161

Query: 679  YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC--- 735
            +L+SL+ L L GN F S P  I Q+ +L  ++L    +LQ +PE P  L  L    C   
Sbjct: 1162 HLTSLQCLVLMGNQFSSKPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLITLVAHQCTSL 1221

Query: 736  KMLQSLPVLPF 746
            K+  SL   PF
Sbjct: 1222 KISSSLLWSPF 1232



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 23/259 (8%)

Query: 406  PLRTLPSNFKPK--NLVELNLRCSKVEQPWEGEKACVPSS-------IQNFKYLSALSFK 456
            PLRT   + + +  NL + N  C         ++ C   S       I+N   L  L  +
Sbjct: 955  PLRTQTRDAEVRRCNLCQQNGICR--------QRGCFEDSDMKELPIIENPLELDGLCLR 1006

Query: 457  GCQSLRSFPSNL-HFVCPVTINFSYCVNLIEFPQISGKV---TRLYLGQSAIEEVPSSIE 512
            GC+ L+S PS++  F    T+    C  L  FP+I   +    +L LG SAI+E+PSSI+
Sbjct: 1007 GCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSSIQ 1066

Query: 513  CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY-SD 571
             L  L+ L+L  CK L  +  S C L SL TL +  C  L+  PE L +++ L+ +Y  D
Sbjct: 1067 RLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYVKD 1126

Query: 572  RTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVAL 631
               +     S   L  L +L + +C  L  +P  I  L  L  ++   +  S  P  ++ 
Sbjct: 1127 FDSMNCQLPSLSGLCSLRILRLINCG-LREIPSGICHLTSLQCLVLMGNQFSSKPDGISQ 1185

Query: 632  SNMLRSLDSSHCKGLESFP 650
             + L  L+ SHCK L+  P
Sbjct: 1186 LHKLIVLNLSHCKLLQHIP 1204



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 32/236 (13%)

Query: 575  ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
            +  LPSS      L  L  E CS+L++ P+ +  +E L  +    SAI ++PSS+     
Sbjct: 1011 LKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRG 1070

Query: 635  LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY-AVREIPQEIAYLSSLEILYLSGNNF 693
            L+ L+ ++CK L + P + +  L+++  L I     ++++P+ +  L SLEILY+   +F
Sbjct: 1071 LQDLNLAYCKNLVNLPES-ICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYVK--DF 1127

Query: 694  ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC----LE 749
            +S+   +  +S L                    L+ L LI+C  L+ +P    C    L+
Sbjct: 1128 DSMNCQLPSLSGL------------------CSLRILRLINCG-LREIPS-GICHLTSLQ 1167

Query: 750  SLDLTGCNMLRSLPELPLCLQ---YLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQ 802
             L L G N   S P+    L     LNL  C +L+ +PE P  L  L    C  L+
Sbjct: 1168 CLVLMG-NQFSSKPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLITLVAHQCTSLK 1222



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 185/451 (41%), Gaps = 61/451 (13%)

Query: 597  SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
            S +  LP     LE     L     +  LPSS+     L +L    C  LESFP   L  
Sbjct: 986  SDMKELPIIENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPE-ILED 1044

Query: 657  LSAMGLLHISDYAVREIPQEIAYLSSLEILYLS-GNNFESLPAIIKQMSQLRFIHLEDFN 715
            +  +  L +   A++EIP  I  L  L+ L L+   N  +LP  I  ++ L+ + ++   
Sbjct: 1045 MEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCP 1104

Query: 716  MLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP-LC-LQYLN 773
             L+ LPE           +   LQSL +L   ++  D   C     LP L  LC L+ L 
Sbjct: 1105 ELKKLPE-----------NLGRLQSLEILY--VKDFDSMNCQ----LPSLSGLCSLRILR 1147

Query: 774  LEDCNMLRSLPELPLCLQLLTVRNC-----NRLQSLPEILLCLQELDASVLEKLSKHSPD 828
            L +C     L E+P  +  LT   C     N+  S P+ +  L +L   ++  LS H   
Sbjct: 1148 LINC----GLREIPSGICHLTSLQCLVLMGNQFSSKPDGISQLHKL---IVLNLS-HCKL 1199

Query: 829  LQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLS 888
            LQ  PE   S  I      C  L  K ++ +L     +     I     G ++ ++  + 
Sbjct: 1200 LQHIPEP-PSNLITLVAHQCTSL--KISSSLLWSPFFK---SGIQKFVPGVKL-LDTFIP 1252

Query: 889  ELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPH-SSCRNLIGFAFCAV---LDSKKVDS 944
            E  G         IP+W S+Q  GS I + LP +     + +GFA C++   LD +  D 
Sbjct: 1253 ESNG---------IPEWISHQKKGSKITLTLPQNWYENDDFLGFALCSLHVPLDIEWRDI 1303

Query: 945  DCFRYFYVSFQFD----LEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFP 1000
            D  R F     F+    L ++ +   +H  +  +      L     + +      N+   
Sbjct: 1304 DESRNFICKLNFNNNPSLVVRDIQSRRHCQICRDGDESNQLW---LIKIAKSMIPNIYHS 1360

Query: 1001 DGYHHTIATFKFFAERKFYKIKRCGLCPVYA 1031
            + Y    A+FK   + K  K++RCG   +YA
Sbjct: 1361 NKYRTLNASFKNDFDTKSVKVERCGFQLLYA 1391



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 112/295 (37%), Gaps = 59/295 (20%)

Query: 647 ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
           +  PR F      +   H   Y++  +P    +   L  L L G+N + L    K  ++L
Sbjct: 585 DHLPRDFEFPSYELTYFHWDGYSLESLPTNF-HAKDLVELILRGSNIKQLWRGNKLHNKL 643

Query: 707 RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP 766
             I+L     L  +P+                 S+P L    E L L GC  L  LP   
Sbjct: 644 NVINLSHSVHLTEIPDF---------------SSVPNL----EILTLKGCVKLECLPRGI 684

Query: 767 L---CLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLS 823
                LQ L+  DC+ L+  PE+          N  +L+ L        +L  + +E+L 
Sbjct: 685 YKWKHLQTLSCGDCSKLKRFPEIK--------GNMRKLREL--------DLSGTAIEELP 728

Query: 824 KHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAI 883
             S     +   LK+  I   F  C KL     NKI  D+L    H A            
Sbjct: 729 SSS-----SFGHLKALKI-LSFRGCSKL-----NKIPTDTL--DLHGAFVQDLNQCSQNC 775

Query: 884 NEKLSELRGSLIVLPG-SEIPDWFSNQSSGSSICIQLPPHSSCRN-LIGFAFCAV 936
           N+      G  IVLPG S +P+W   + +     I+LP +    N  +GFA C V
Sbjct: 776 NDSAYHGNGICIVLPGHSGVPEWMMERRT-----IELPQNWHQDNEFLGFAICCV 825



 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 65/140 (46%), Gaps = 37/140 (26%)

Query: 711  LEDFNMLQSLP--ELPLCLKYLHLIDCKMLQSLP--VLPF-CLESLDLTGCNMLRSLPEL 765
             ED +M + LP  E PL L  L L  CK L+SLP  +  F  L +L   GC+ L S PE+
Sbjct: 983  FEDSDM-KELPIIENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEI 1041

Query: 766  --------------------PLC------LQYLNLEDCNMLRSLPELPLC----LQLLTV 795
                                P        LQ LNL  C  L +LPE  +C    L+ LT+
Sbjct: 1042 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPE-SICNLTSLKTLTI 1100

Query: 796  RNCNRLQSLPEILLCLQELD 815
            ++C  L+ LPE L  LQ L+
Sbjct: 1101 KSCPELKKLPENLGRLQSLE 1120


>gi|356524164|ref|XP_003530702.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1248

 Score =  301 bits (770), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 242/745 (32%), Positives = 356/745 (47%), Gaps = 124/745 (16%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNIP 78
           KT +A A+++  + +FEG CF+ D+R  S+   GL  LQ+ +LS  + EK +++   N  
Sbjct: 228 KTAIACAVYNLIADQFEGQCFLGDIREKSKH--GLVELQETILSEMVGEKSIKLGSTNRG 285

Query: 79  HFT-KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
               K +++R K+L++LDDV+ + QLK L G+   FG GSRI+VTT DK +L +  G E+
Sbjct: 286 KAVLKSKLQRKKVLLILDDVDRLEQLKALAGDPSWFGHGSRIIVTTTDKHLL-RVHGVER 344

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           + Y   GL+ +EA E F   AFK N         S+  V Y+ G PL LE++GS+L  K 
Sbjct: 345 R-YEAKGLDDKEALELFSWHAFKSNEVSPSYMDISKRAVLYSNGLPLALEIIGSNLNGKT 403

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W   L  + R   +   DI + LK+ ++ L    K +FLDIACFF G D   V S+L
Sbjct: 404 MPEWQAALDTIER---NPDEDIQEKLKVGYDGLKRNEKEVFLDIACFFRGSDLKDVTSLL 460

Query: 258 DD----SESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
                 S   V+ +LIDKSL+ I    F+ MH++++ MGR+IV+QES  EPGKRSRLW  
Sbjct: 461 FQGRGFSPEYVIRVLIDKSLIKIDKYGFVRMHNLVENMGREIVKQESPSEPGKRSRLWLY 520

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
           ++I  VL+++KGTD IE I L   K K +  +      M+NL+L                
Sbjct: 521 EDIVDVLENDKGTDTIEVIMLHSPKNKEVQWNGSELKKMTNLKL---------------- 564

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNL--RCSKVE 430
                 LS        G  +LP  LR L W  YP  +LP  F  + LV L+L   C+ + 
Sbjct: 565 ------LSIENAHFSRGPVHLPNSLRVLKWWGYPSPSLPPEFDSRRLVMLDLSNSCNIMG 618

Query: 431 QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP-----SNLHFVCPVTINFSYCVNLI 485
           +  +            F+ LS +  +GC+ ++  P      NL  +C        C NL+
Sbjct: 619 KQLK---------FMKFESLSEMVLRGCRFIKQTPDMSGAQNLKKLC-----LDNCKNLV 664

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
                               EV  SI  L  +      GC  L+ +  SF KL SL  L 
Sbjct: 665 --------------------EVHDSIGLLDKITWFTAVGCTNLRILPRSF-KLTSLEHLS 703

Query: 546 LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
              C NL+  P ILE+M+H+K++    T I ELP SF  L GL+ L ++ C  L+ +P +
Sbjct: 704 FKKCSNLQCLPNILEEMKHVKKLDLCGTAIEELPFSFRKLTGLKYLVLDKCKMLNQIPIS 763

Query: 606 IGSL------------EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF 653
           I  L             Y   IL  +    +L SS +L ++                   
Sbjct: 764 ILMLPKLEKLTAIKCGRYANLILGKSEGQVRLSSSESLRDV------------------- 804

Query: 654 LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLED 713
                    L+ +D A    P       ++E L L+G+ F+ LP  I Q   L+ + L++
Sbjct: 805 --------RLNYNDLAPASFP-------NVEFLVLTGSAFKVLPQCISQCRFLKNLVLDN 849

Query: 714 FNMLQSLPELPLCLKYLHLIDCKML 738
              LQ +  +P  +KYL  I+C  L
Sbjct: 850 CKELQEIRGVPPKIKYLSAINCTSL 874



 Score = 40.0 bits (92), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 50/225 (22%)

Query: 727 LKYLHLIDCKMLQSLPVL---PFCLESLDLTGCNMLRSLPELPLC------LQYLNLEDC 777
           L++L    C  LQ LP +      ++ LDL G     ++ ELP        L+YL L+ C
Sbjct: 699 LEHLSFKKCSNLQCLPNILEEMKHVKKLDLCGT----AIEELPFSFRKLTGLKYLVLDKC 754

Query: 778 NMLRSLPELPLCL---QLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPE 834
            ML  +P   L L   + LT   C R  +L      L + +  V    S+   D++    
Sbjct: 755 KMLNQIPISILMLPKLEKLTAIKCGRYANL-----ILGKSEGQVRLSSSESLRDVRLNYN 809

Query: 835 SLKSAAICFEFTNCLKLNGKA--------------NNKILAD--SLLRIRHM-------- 870
            L  A+  F     L L G A               N +L +   L  IR +        
Sbjct: 810 DLAPAS--FPNVEFLVLTGSAFKVLPQCISQCRFLKNLVLDNCKELQEIRGVPPKIKYLS 867

Query: 871 AIASLRLGYE---MAINEKLSELRGSLIVLPGSEIPDWFSNQSSG 912
           AI    L +E   M +N++L E  G+   LPG+ IP+WF + ++G
Sbjct: 868 AINCTSLSHESQSMLLNQRLHEGGGTDFSLPGTRIPEWFDHCTTG 912


>gi|359493392|ref|XP_002279365.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1461

 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 352/1172 (30%), Positives = 533/1172 (45%), Gaps = 235/1172 (20%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S+ V +VGI+G+GGIGKTT+AK +++   ++F+   F+ +VR  S+   GL  LQ+++L 
Sbjct: 215  SNEVSMVGIYGIGGIGKTTIAKVVYNDMLYKFKRHSFLENVREKSKGGRGLLELQEKLLC 274

Query: 64   TTLSEK-LEVAGPNIPHFTKERVRRM----KLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
              L EK LE+   NI     E+++      K+LIVLDDV+   QL+ L    D F +GS 
Sbjct: 275  DILMEKNLELR--NIDKGI-EKIKSECCFEKVLIVLDDVDCPRQLEFLAPNSDCFHRGSI 331

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            I+VTTR+KR L  +  E    Y   GL  E+A E FC  AF+++H  ++    S  ++ Y
Sbjct: 332  IIVTTRNKRCLNVY--ESYSSYEAKGLAREQAKELFCWNAFRKHHPKDNYVDLSNRILDY 389

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             KG PL L VLGS L  +    W   L   +++  + + DI  +L+IS++ L  + K +F
Sbjct: 390  AKGLPLALVVLGSFLFQRDVDEWESTL---DKLKTNPLEDIQKVLQISYDGLDDKCKKLF 446

Query: 239  LDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
            LDIACFF+ +D+ FV  IL+  +      L +L ++ L+SI+   + MHD+LQEMG  IV
Sbjct: 447  LDIACFFKYKDEKFVTRILEGCKFHPKIGLRVLDERCLISITYGTIRMHDLLQEMGWAIV 506

Query: 296  RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS--KIKGINLDPRAFTNMSN 353
            RQ   + PGK SRLW+ ++I  V   NKGT  IEGIF++ S    K I L   AF  M+ 
Sbjct: 507  RQIDPECPGKWSRLWELQDIESVFTRNKGTKNIEGIFINRSWDTKKRIQLTAEAFRKMNR 566

Query: 354  LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
            LRL                      +  + VQL    +     L Y HWD YPL  LPSN
Sbjct: 567  LRLL--------------------IVKGNMVQLSQDFELPCHDLVYFHWDNYPLEYLPSN 606

Query: 414  FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY---------------LSALSFKGC 458
            F  +NLVELNL  S +E  WEG        + N  Y               L  L  KGC
Sbjct: 607  FHVENLVELNLWYSNIEHLWEGNMTARKLKVINLSYSMHLVGISSISSAPNLEILILKGC 666

Query: 459  QS---------------LRSFPSNLHFVCPV-TINFSYCVNLIEFPQIS-GKVTRL-YLG 500
             S               L S P ++  +  + T+N   C  L+ FP I+ G +  L YL 
Sbjct: 667  TSNLNGLEKLDLGYCKNLLSLPDSIFSLSSLQTLNLFECSKLVGFPGINIGSLKALEYLD 726

Query: 501  QS---AIEEVPSSIECLTDLEVLDLRGCKRLKRI-STSFCKLRSLVTLILLGCLNLEHFP 556
             S    IE +P++I   + L  L L GC +LK     +     SL TL L+GC  L+ FP
Sbjct: 727  LSYCENIESLPNNIGSFSSLHTLSLMGCSKLKGFPDINIGSFSSLHTLSLMGCSKLKGFP 786

Query: 557  EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
            +I                      +  +L  L++L    C  L++LP+NIGSL  L+ +L
Sbjct: 787  DI----------------------NIGSLKALQLLDFSRCRNLESLPNNIGSLSSLHTLL 824

Query: 617  AAA-SAISQLPS-SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE-- 672
                S +   P  +      L+ LD S C+ LES P + +  LS++  L I++    E  
Sbjct: 825  LVGCSKLKGFPDINFGSLKALQLLDFSRCRNLESLPMS-IYNLSSLKTLRITNCPKLEEM 883

Query: 673  ----------IPQEIAYLSSLEILYLSGNNFESLPAIIKQ--MSQLRFIHLEDFNMLQSL 720
                      +P   +++S+  I++  G  F SL A+ ++  +S L  + +  F  +   
Sbjct: 884  LEIELGVDWPLPPTTSHISNSAIIWYDG-CFSSLEALKQKCPLSSLVELSVRKFYGM--- 939

Query: 721  PELPLCLKYLHLIDCKMLQSLPVLP----------FCLES---LDLTGC--------NML 759
             E  +     HL   K+L SL   P          F L S   L LT C        + +
Sbjct: 940  -EKDILSGSFHLSSLKIL-SLGNFPSMAGGILDKIFHLSSLVKLSLTKCKPTEEGIPSDI 997

Query: 760  RSLPELPLCLQYLNLEDCNM-----------LRSLPELPLC----------------LQL 792
            R+L      LQ L+L DCN+           L SL EL L                 L+ 
Sbjct: 998  RNLSP----LQQLSLHDCNLMEGKILNHICHLTSLEELHLGWNHFSSIPAGISRLSNLKA 1053

Query: 793  LTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICF--EFTNCLK 850
            L + +C  LQ +PE+   L+ LDA   +++S  SP L      + S   CF  E  +C+ 
Sbjct: 1054 LDLSHCKNLQQIPELPSSLRFLDAHCSDRISS-SPSLL----PIHSMVNCFKSEIEDCVV 1108

Query: 851  LNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLP-GSEIPDWFSNQ 909
            ++               R+ +     +G                IV+P  S I +W + +
Sbjct: 1109 IH---------------RYSSFWGNGIG----------------IVIPRSSGILEWITYR 1137

Query: 910  S-SGSSICIQLPPH-SSCRNLIGFAFCAVLDSKKVDSDCFRYF---------------YV 952
            +  G  + I+LPP+     +L GFA C V  +   +S+    +                 
Sbjct: 1138 NMGGHKVTIELPPNWYENDDLWGFALCCVYVAPACESEDESQYESGLISEDDSDLEDEEA 1197

Query: 953  SFQFDLEIKTLSETKHVDLGY--NSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATF 1010
            SF  +L I+  ++++ V  G+  + R ++D +   + ++ + P L +   +  +HT    
Sbjct: 1198 SFYCELTIEGNNQSEDV-AGFVLDFRCVKDDVSDMQWVICY-PKLAI---EKSYHTNQWT 1252

Query: 1011 KFFAERKFYKIKRCGLCPVYANPSETKDNTFT 1042
             F A     ++  CG+  VY    E K  T  
Sbjct: 1253 HFKASFGGAQVAECGIRLVYTKDYEQKHPTMA 1284


>gi|147774849|emb|CAN69078.1| hypothetical protein VITISV_004764 [Vitis vinifera]
          Length = 1478

 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 274/852 (32%), Positives = 411/852 (48%), Gaps = 90/852 (10%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM-- 61
            S++++++G++G GG+GK+TLAKA++++    FE   F+S+V+       GL  LQ ++  
Sbjct: 208  SNSIRVLGLYGPGGVGKSTLAKALYNKLVAHFENRSFISNVKKYLAQENGLLSLQIKLIG 267

Query: 62   -LSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGE---LDQFGQGS 117
             LS   S   EV    +    K  V+  ++LI+LDDV++  QL  + G       F +GS
Sbjct: 268  DLSGMASHVNEVNAGLVA--IKSIVQEKRVLIILDDVDDASQLTAIXGRKKWRKWFYEGS 325

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI++TTRD+ VL +    E ++Y V  L   E+ + F ++A        D    S+ +VS
Sbjct: 326  RIIITTRDREVLHEL--HENELYEVKQLNSPESLQLFSHYALGRVKPTPDYLPLSKQIVS 383

Query: 178  YTKGNPLVLEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
             T G PL LEV GSSL  KRK   W   L  L +I      D+  +LKIS++ L  + K 
Sbjct: 384  LTGGLPLALEVFGSSLYDKRKIEEWEDALQKLKQI---RPMDLQGVLKISYDGLDEQEKC 440

Query: 237  IFLDIACFF--EGEDKDFVASILDDS--ESDV-LDILIDKSLVSISGNF-LNMHDILQEM 290
             FLDIAC F   G  K+    IL      +++ + +L+DKSL+ I+ ++ L MHD L++M
Sbjct: 441  XFLDIACLFIKMGMKKEDAIDILKGCGFRAEIGIKVLVDKSLLKIAEDYTLWMHDQLRDM 500

Query: 291  GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL-------------SK 337
            GRQIV  E+ ++ G RSRLWD  EI RVL++N G+  I+G+ LD               +
Sbjct: 501  GRQIVLHENHEDLGMRSRLWDRSEILRVLQNNLGSRCIQGMVLDFVSDIFMKDSAAAWGR 560

Query: 338  IKGINLDPRAFTNMSNLR-LFKFYVPKFYEIEK--------LPSMSTEEQLSYSKVQLPN 388
             +G    P   T ++ L+  +K Y     E E+          SM     L    VQL  
Sbjct: 561  FRGT---PNFTTAVTWLKETYKEYFQHAAEKERELILQTKSFESMINLRLLQIDNVQLEG 617

Query: 389  GLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSK-VEQPWEGEKACVPSSIQNF 447
                +P +L++L W   PL+TLPS+F P+ L  L+L  SK + + W G       S  N 
Sbjct: 618  EFKLMPAELKWLQWRGCPLKTLPSDFCPQGLRVLDLSESKNIVRLWGGRWW----SWHNN 673

Query: 448  KYLSALSFKGCQSLRSFPSN--------LHF-VCP-------------VTINFSYCVNLI 485
            K      F      +S P +        L F + P             + +N   C NL 
Sbjct: 674  KCYQTWYFSHIN--QSAPDHDMEEQVPLLGFHISPLLLPYQDVVGENLMVMNXHGCCNLT 731

Query: 486  EFPQISGK--VTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLV 542
              P +SG   + +L L     + ++  SI  +  L  LDL  CK L    +    L++L 
Sbjct: 732  AIPDLSGNQALEKLILQHCHGLVKIHKSIGDIISLLHLDLSECKNLVEFPSDVSGLKNLX 791

Query: 543  TLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNL 602
            TLIL GC  L+  PE +  M+ L+ +  D T I +LP S   L  LE L + +C  L  L
Sbjct: 792  TLILSGCSKLKELPENISYMKSLRELLLDGTVIEKLPESVLRLTRLERLSLNNCQSLKQL 851

Query: 603  PDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGL 662
            P  IG LE L  +    SA+ ++P S      L  L    C+ + + P + +  L  +  
Sbjct: 852  PTCIGKLESLRELSFNDSALEEIPDSFGSLTNLERLSLMRCQSIYAIPDS-VXNLKLLTE 910

Query: 663  LHISDYAVREIPQEIAYLSSLEILYLSGNNFES-LPAIIKQMSQLRFIHLEDFNMLQSLP 721
              ++   V E+P  I  LS+L+ L +    F S LPA I+ ++ +  + L D   +  LP
Sbjct: 911  FLMNGSPVNELPASIGSLSNLKDLSVGXCRFLSKLPASIEGLASMVXLQL-DGTSIMDLP 969

Query: 722  ELPLCLKYLHLID---CKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC------LQYL 772
            +    LK L  ++   CK L+SLP     + SL+ T   +   + ELP        L  L
Sbjct: 970  DQIGGLKTLRRLEMRFCKRLESLPEAIGSMGSLN-TLIIVDAPMTELPESIGKLENLIML 1028

Query: 773  NLEDCNMLRSLP 784
            NL  C  LR LP
Sbjct: 1029 NLNKCKRLRRLP 1040



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 224/496 (45%), Gaps = 64/496 (12%)

Query: 321  HNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLS 380
            H    D I  + LDLS+ K +   P   + + NL      +    ++++LP     E +S
Sbjct: 757  HKSIGDIISLLHLDLSECKNLVEFPSDVSGLKNLX--TLILSGCSKLKELP-----ENIS 809

Query: 381  YSKV------------QLPNGLDYLPKKLRYLHWDTYPLRTLPSNF-KPKNLVELNLRCS 427
            Y K             +LP  +  L +  R    +   L+ LP+   K ++L EL+   S
Sbjct: 810  YMKSLRELLLDGTVIEKLPESVLRLTRLERLSLNNCQSLKQLPTCIGKLESLRELSFNDS 869

Query: 428  KVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS---NLHFVCPVTINFSYCVNL 484
             +E+        +P S  +   L  LS   CQS+ + P    NL  +    +N S  VN 
Sbjct: 870  ALEE--------IPDSFGSLTNLERLSLMRCQSIYAIPDSVXNLKLLTEFLMNGS-PVN- 919

Query: 485  IEFPQISGKVTRL---YLGQSA-IEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS 540
             E P   G ++ L    +G    + ++P+SIE L  +  L L G   +  +      L++
Sbjct: 920  -ELPASIGSLSNLKDLSVGXCRFLSKLPASIEGLASMVXLQLDGTS-IMDLPDQIGGLKT 977

Query: 541  LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
            L  L +  C  LE  PE +  M  L  +     P+TELP S   L  L +L +  C +L 
Sbjct: 978  LRRLEMRFCKRLESLPEAIGSMGSLNTLIIVDAPMTELPESIGKLENLIMLNLNKCKRLR 1037

Query: 601  NLPDNIGSLEYLYYILAAASAISQLPSSVA-LSNMLR-------------SLDSSHCKGL 646
             LP +IG L+ L+++    +A+ QLP S   L++++R             +L  +  K L
Sbjct: 1038 RLPGSIGXLKSLHHLXMEETAVRQLPESFGMLTSLMRLLMAKRPHLELPQALGPTETKVL 1097

Query: 647  ESFPRTFLLGL----SAMGLLHISDYAV----REIPQEIAYLSSLEILYLSGNNFESLPA 698
             +   + L+ L    S + LL+  D        +IP +   LSSLEIL L  NNF SLP+
Sbjct: 1098 GAEENSELIVLPTSFSNLSLLYELDARAWKISGKIPDDFDKLSSLEILNLGRNNFSSLPS 1157

Query: 699  IIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF--CLESLDLTGC 756
             ++ +S LR + L     L++LP LP  L  ++  +C  L+ +  L     L+ L+LT C
Sbjct: 1158 SLRGLSILRKLLLPHCEELKALPPLPSSLMEVNAANCYALEVISDLSNLESLQELNLTNC 1217

Query: 757  NMLRSLPELPLCLQYL 772
              L  +P +  CL+ L
Sbjct: 1218 KKLVDIPGVE-CLKSL 1232



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 130/528 (24%), Positives = 212/528 (40%), Gaps = 102/528 (19%)

Query: 441  PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT------------------------I 476
            PS +   K L  L   GC  L+  P N+ ++  +                         +
Sbjct: 781  PSDVSGLKNLXTLILSGCSKLKELPENISYMKSLRELLLDGTVIEKLPESVLRLTRLERL 840

Query: 477  NFSYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
            + + C +L + P   GK+     L    SA+EE+P S   LT+LE L L  C+ +  I  
Sbjct: 841  SLNNCQSLKQLPTCIGKLESLRELSFNDSALEEIPDSFGSLTNLERLSLMRCQSIYAIPD 900

Query: 534  SFCKLRSLVTLILLG-----------------------CLNLEHFPEILEKMEHLKRIYS 570
            S   L+ L   ++ G                       C  L   P  +E +  +  +  
Sbjct: 901  SVXNLKLLTEFLMNGSPVNELPASIGSLSNLKDLSVGXCRFLSKLPASIEGLASMVXLQL 960

Query: 571  DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA 630
            D T I +LP     L  L  L +  C +L++LP+ IGS+  L  ++   + +++LP S+ 
Sbjct: 961  DGTSIMDLPDQIGGLKTLRRLEMRFCKRLESLPEAIGSMGSLNTLIIVDAPMTELPESIG 1020

Query: 631  LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
                L  L+ + CK L   P + +  L ++  L + + AVR++P+    L+SL  L ++ 
Sbjct: 1021 KLENLIMLNLNKCKRLRRLPGS-IGXLKSLHHLXMEETAVRQLPESFGMLTSLMRLLMAK 1079

Query: 691  NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP----- 745
                 LP  +   ++ + +  E+ + L  LP     L  L+ +D +  +    +P     
Sbjct: 1080 RPHLELPQALGP-TETKVLGAEENSELIVLPTSFSNLSLLYELDARAWKISGKIPDDFDK 1138

Query: 746  -FCLESLDLTGCNMLRSLPELPLCLQYLN---LEDCNMLRSLPELPLCLQLLTVRNCNRL 801
               LE L+L G N   SLP     L  L    L  C  L++LP LP  L  +   NC  L
Sbjct: 1139 LSSLEILNL-GRNNFSSLPSSLRGLSILRKLLLPHCEELKALPPLPSSLMEVNAANCYAL 1197

Query: 802  QSLPEI--LLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKI 859
            + + ++  L  LQEL+ +  +KL           E LKS    F  + C   +       
Sbjct: 1198 EVISDLSNLESLQELNLTNCKKLVDIP-----GVECLKSLK-GFFMSGCSSCSST----- 1246

Query: 860  LADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFS 907
                      +A+ +LR                  + +PGS IPDWFS
Sbjct: 1247 ----------VALKNLR-----------------TLSIPGSNIPDWFS 1267



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 122/296 (41%), Gaps = 71/296 (23%)

Query: 588  LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
            L V+    C  L  +PD  G+      IL     + ++  S+     L  LD S CK L 
Sbjct: 719  LMVMNXHGCCNLTAIPDLSGNQALEKLILQHCHGLVKIHKSIGDIISLLHLDLSECKNLV 778

Query: 648  SFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
             FP + + GL  +  L +S  + ++E+P+ I+Y+ SL  L L G   E LP  + ++++L
Sbjct: 779  EFP-SDVSGLKNLXTLILSGCSKLKELPENISYMKSLRELLLDGTVIEKLPESVLRLTRL 837

Query: 707  RFIHLEDFNMLQSLPELPLC-----------------------------LKYLHLIDCKM 737
              + L   N  QSL +LP C                             L+ L L+ C  
Sbjct: 838  ERLSL---NNCQSLKQLPTCIGKLESLRELSFNDSALEEIPDSFGSLTNLERLSLMRC-- 892

Query: 738  LQSLPVLPFCLESLDLTGCNMLRSLP--ELPLCLQYL-NLED-----CNMLRSLP----- 784
             QS+  +P  + +L L    ++   P  ELP  +  L NL+D     C  L  LP     
Sbjct: 893  -QSIYAIPDSVXNLKLLTEFLMNGSPVNELPASIGSLSNLKDLSVGXCRFLSKLPASIEG 951

Query: 785  ---------------ELP------LCLQLLTVRNCNRLQSLPEILLCLQELDASVL 819
                           +LP        L+ L +R C RL+SLPE +  +  L+  ++
Sbjct: 952  LASMVXLQLDGTSIMDLPDQIGGLKTLRRLEMRFCKRLESLPEAIGSMGSLNTLII 1007


>gi|227438235|gb|ACP30607.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1128

 Score =  300 bits (768), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 216/685 (31%), Positives = 351/685 (51%), Gaps = 82/685 (11%)

Query: 10  VGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK 69
           VG+ GM GIGKTTL K +++++ H+F    F+ DVR   +      ++  + L       
Sbjct: 226 VGVVGMPGIGKTTLTKMLYEKWQHKFLRCVFLHDVRKLWQDRMMDRNIFMRELLKDDDLS 285

Query: 70  LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVL 129
            +VA    P   K  +   K L+VLD+V +  Q++ L+GE D   +GS I +TT DK V+
Sbjct: 286 QQVAADLSPESLKALLLSKKSLVVLDNVTDKKQIEVLLGECDWIKKGSLIFITTSDKSVI 345

Query: 130 EKFRGEEKKIYRVNGLEFEEAFEHFCNFAF---KENHCPE-DLNWHSRSVVSYTKGNPLV 185
           E   G+    Y V  L   E+F++F  FAF   K  + P+ +    SR    Y KGNPL 
Sbjct: 346 E---GKVDDTYEVLRLSGRESFQYFSYFAFGGGKHYYTPKGNFMNLSRLFADYAKGNPLA 402

Query: 186 LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF 245
           L++LG  L  K ++HW      L+++ +S    I ++L+IS++ L+   K++FLD+ACFF
Sbjct: 403 LKILGVELNGKDETHWED---KLSKLAQSPDKTIQNVLQISYDGLSELHKNVFLDVACFF 459

Query: 246 EGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGK 305
              D+ +V  +++  +S++ D L  K  ++ISG  + MHD+L   G+++  Q S      
Sbjct: 460 RSGDEYYVKCLVESCDSEIKD-LASKFFINISGGRVEMHDLLYTFGKELGLQGSR----- 513

Query: 306 RSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLFKFYVPKF 364
             RLW+ K +   LK   G +++ GIFLD+S++K  + L+   F+ M NLR  KFY    
Sbjct: 514 --RLWNHKGVVGALKKRAGAESVRGIFLDMSELKKKLPLEKCTFSGMRNLRYLKFY---- 567

Query: 365 YEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNL 424
                  S    E  +  K+  P GL++   ++RYL+W  +PL+ LP +F PKNL +L+L
Sbjct: 568 ------NSCCHRECEADCKLSFPEGLEFPLDEVRYLYWLKFPLKKLPKDFNPKNLTDLSL 621

Query: 425 RCSKVEQPWEGEKAC---------------------------------------VPSSIQ 445
             S++E+ WEG KA                                        +P  + 
Sbjct: 622 PYSEIEEIWEGVKATPKLKWVDLSHSSKLSKLSGLQNAESLQRLSLEGCKSLQELPREMN 681

Query: 446 NFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIE 505
           + K L  L+ +GC SLR  P +++ +   T+  + C +L EF  IS  +  L L  +AI 
Sbjct: 682 HMKSLVFLNMRGCTSLRFLP-HMNLISMKTLILTNCSSLQEFRVISDNLETLKLDGTAIS 740

Query: 506 EVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHL 565
           ++P+++  L  L VL+L+ C  L+ +  S  KL+ L  L+L GC  L+ FP  +E M+ L
Sbjct: 741 QLPANMVKLQRLMVLNLKDCIMLEAVPESLGKLKKLQELVLSGCSKLKTFPIPIENMKRL 800

Query: 566 KRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQL 625
           + +  D T IT++P             ++  S++    + + SL +L   L+  + I+ L
Sbjct: 801 QILLLDTTAITDMPK-----------ILQFNSQIKCGMNGLSSLRHL--CLSRNNMITNL 847

Query: 626 PSSVALSNMLRSLDSSHCKGLESFP 650
             +++  + LR LD  +CK L S P
Sbjct: 848 QVNISQLHHLRLLDVKYCKNLTSIP 872


>gi|297791299|ref|XP_002863534.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309369|gb|EFH39793.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1360

 Score =  300 bits (768), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 218/680 (32%), Positives = 333/680 (48%), Gaps = 100/680 (14%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ VGIWGM GIGKTTLAKA+FDQ S EF+ SCF+ D     +  G    L++Q     L
Sbjct: 167 IRCVGIWGMPGIGKTTLAKAVFDQMSGEFDASCFIEDYSKAIQEKGVYCLLEEQF----L 222

Query: 67  SEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            E    AG  +   +  + ++   ++L+VLDDV     ++  +G  D FG  S I++T+R
Sbjct: 223 KENAGGAGGTVTKLSLLRNKLNNKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITSR 282

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           DK+V    R ++  IY V GL  +EA + F   A  ++   + L+  S  VV Y  G+PL
Sbjct: 283 DKQVFRLCRVDQ--IYEVLGLNEKEALQLFSFCASIDDMAEQSLHEVSMKVVKYASGHPL 340

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L + G    LK K    ++      + E       D +K  ++ L  R K+IFLDIACF
Sbjct: 341 ALSLYGRE--LKGKKTLPEMETTFLELKEHPPTMFVDAIKSCYDTLNDREKNIFLDIACF 398

Query: 245 FEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           FEGE+ D+V  +L+         +D+L++K LV+I+ N + MH+++Q +GRQI+ +E+ +
Sbjct: 399 FEGENVDYVMQLLEGCGFFPHVGIDVLVEKCLVTITENQVRMHNLIQNVGRQIINRET-R 457

Query: 302 EPGKRSRLWDPKEISRVLKHN---------------KGTDAIEGIFLDLSKIKGINLDPR 346
           +  +R RLW+P  I  +L+ N               +G + IEG+FLD S     ++ P 
Sbjct: 458 QTKRRDRLWEPWSIKYLLEDNGEKENGEHKTTLERAQGPEEIEGMFLDTSNF-SFDIKPA 516

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           AF NM NLRL K Y             S+  ++ + K  L   L+ LP +LR LHW+ YP
Sbjct: 517 AFDNMLNLRLLKIY-------------SSNPEVHHVKNFLKGSLNSLPNELRLLHWENYP 563

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA---------CVPSSIQNF------KYLS 451
           L+ LP NF P +LVE+N+  S++++ W G K          C    + +       + L 
Sbjct: 564 LQFLPQNFDPIHLVEINMPYSQLKKLWGGTKNLEMLKTIRLCHSQQLVDIDDVLKAQNLE 623

Query: 452 ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSI 511
            +  +GC  L+SFP+    +   T+N S C  +  FP+I   +  L L  + I E+P SI
Sbjct: 624 VIDLQGCTRLQSFPATGQLLHLRTVNLSGCTEIKSFPEIPPNIETLNLQGTGIIELPLSI 683

Query: 512 ------------------ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
                               +++LE  DL+    L ++STS   L  L+ L L  C  L 
Sbjct: 684 IKPNYTELLNLLAEIPGLSGVSNLEQSDLKPLTSLMKMSTSNQNLGKLICLELKDCARLR 743

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
             P                        +  NL  L+VL +  CS+L+ +     +L+ LY
Sbjct: 744 SLP------------------------NMNNLELLKVLDLSGCSELETIQGFPQNLKELY 779

Query: 614 YILAAASAISQLPSSVALSN 633
               A   + QLP S+ L N
Sbjct: 780 LAGTAVRQVPQLPQSLELFN 799



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 29/208 (13%)

Query: 662 LLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP 721
           LLH  +Y ++ +PQ    +  +EI  +  +  + L    K +  L+ I L     L  + 
Sbjct: 556 LLHWENYPLQFLPQNFDPIHLVEI-NMPYSQLKKLWGGTKNLEMLKTIRLCHSQQLVDID 614

Query: 722 ELPLCLKYLHLID---CKMLQSLPVLP--FCLESLDLTGCNMLRSLPELPLCLQYLNLED 776
           ++ L  + L +ID   C  LQS P       L +++L+GC  ++S PE+P  ++ LNL+ 
Sbjct: 615 DV-LKAQNLEVIDLQGCTRLQSFPATGQLLHLRTVNLSGCTEIKSFPEIPPNIETLNLQG 673

Query: 777 CNMLRSLPELPLCL------QLLTVRNCNRLQSLPEI--LLCLQELDASVLEKLSKHSPD 828
             ++    ELPL +      +LL     N L  +P +  +  L++ D   L  L K S  
Sbjct: 674 TGII----ELPLSIIKPNYTELL-----NLLAEIPGLSGVSNLEQSDLKPLTSLMKMSTS 724

Query: 829 LQWAPESLKSAAICFEFTNCLKLNGKAN 856
            Q          IC E  +C +L    N
Sbjct: 725 NQNL-----GKLICLELKDCARLRSLPN 747



 Score = 39.7 bits (91), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 156/395 (39%), Gaps = 74/395 (18%)

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQ 624
           L+ ++ +  P+  LP +F+ +  +E+      S+L  L     +LE L  I    S    
Sbjct: 554 LRLLHWENYPLQFLPQNFDPIHLVEINM--PYSQLKKLWGGTKNLEMLKTIRLCHSQQLV 611

Query: 625 LPSSVALSNMLRSLDSSHCKGLESFPRTF-LLGLSAMGLLHISDY-AVREIPQEIAYLSS 682
               V  +  L  +D   C  L+SFP T  LL L  + L   ++  +  EIP  I     
Sbjct: 612 DIDDVLKAQNLEVIDLQGCTRLQSFPATGQLLHLRTVNLSGCTEIKSFPEIPPNI----- 666

Query: 683 LEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
            E L L G     LP     +S ++  + E  N+L  +P L   +  L   D K L SL 
Sbjct: 667 -ETLNLQGTGIIELP-----LSIIKPNYTELLNLLAEIPGLS-GVSNLEQSDLKPLTSLM 719

Query: 743 VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELP--LCLQLLTVRNCNR 800
            +    ++L    C               L L+DC  LRSLP +     L++L +  C+ 
Sbjct: 720 KMSTSNQNLGKLIC---------------LELKDCARLRSLPNMNNLELLKVLDLSGCSE 764

Query: 801 LQSLPEILLCLQELDASVLEKLSKHSPDLQWAPE--------SLKSAAICFE-------F 845
           L+++      L+EL   +     +  P L  + E        SLKS  + FE        
Sbjct: 765 LETIQGFPQNLKEL--YLAGTAVRQVPQLPQSLELFNAHGCVSLKSIRVDFEKLPVHYTL 822

Query: 846 TNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDW 905
           +NC  L  K  +  L  +L   + +              E   EL  +L     S     
Sbjct: 823 SNCFDLCPKVVSDFLVQALANAKRIP------------REHQQELNKTLAF---SFCAPS 867

Query: 906 FSNQSS------GSSICIQLPPHSSCRN-LIGFAF 933
            +NQ+S      GSS+  +L P  S RN L+GFA 
Sbjct: 868 HANQNSKLDLQLGSSVMTRLNP--SWRNTLVGFAM 900


>gi|449464636|ref|XP_004150035.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1195

 Score =  300 bits (768), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 313/1006 (31%), Positives = 479/1006 (47%), Gaps = 159/1006 (15%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S + V +VGI GMGGIGKTTLAKA++++ +++FE  CF+S+VR  SE   GL  LQ+++L
Sbjct: 218  SDNGVNMVGIHGMGGIGKTTLAKALYNKITYQFEACCFLSNVRETSEQFNGLVQLQEKLL 277

Query: 63   STTLSE-KLEV----AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            +    +  L+V     G NI    K+R+   K+L+VLDDV++  QL  L+G  D FG+GS
Sbjct: 278  NEIFKDNNLKVDNVDKGMNI---IKDRLCSRKVLMVLDDVDKDDQLDALVGGRDWFGRGS 334

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            +I+VTTRD+ +LE +  +  KI+ +  L+ +++ E FC  AFK++H P         +V 
Sbjct: 335  KIIVTTRDRHLLETYSFD--KIHPIQLLDCDKSLELFCWHAFKQSH-PSRNYSELPELVR 391

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL--TPRVK 235
            Y  G PL L +LGS LC + +  W   L +L    E  I  ++   +ISF +L   P VK
Sbjct: 392  YCNGLPLALVILGSLLCKRDQIIWKSKLDELKNFPEPGIEAVF---QISFKRLPENPPVK 448

Query: 236  SIFLDIACFFEGEDKDFVASILDDS----ESDVLDILIDKSLVSISGNFLNMHDILQEMG 291
             IFLDI CFF GED  +  ++L       ES ++ IL+D SLV++    + MHD++++MG
Sbjct: 449  EIFLDICCFFVGEDVSYSKNVLKACDPYLESRII-ILMDLSLVTVEDGKIQMHDLIRQMG 507

Query: 292  RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
            + IVR++S K P KRSRLW  KE  ++L    GT  ++ I LDL     + ++  AF NM
Sbjct: 508  QMIVRRKSFK-PEKRSRLWVAKEAVKMLIEKSGTHKVKAIKLDLRNNGSLIVEAEAFRNM 566

Query: 352  SNLRL-------------FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLP---- 394
             NLRL             FK Y+P    IE   S S       S V +  GL  L     
Sbjct: 567  ENLRLLILQNAAKLPTNIFK-YLPNIKWIE-YSSSSVRWYFPISFV-VNGGLVGLVINGV 623

Query: 395  ------------KKLRYLHWDTYPLRTLPSNFKPK-NLVELN-LRCSKVEQPWEGEKACV 440
                        K L+++    + L     +F    NL +L  L C +++         +
Sbjct: 624  SNKHPGIIFEDCKMLKHVDLSYWRLLEETPDFSAALNLEKLYLLSCKRLKM--------I 675

Query: 441  PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI-NFSYCVNLIEFPQISG--KVTRL 497
              S+ +   L  L  +GC++L   PS+   +  + + N S C+ L E P +S    +  L
Sbjct: 676  HGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKLKEIPDLSASSNLKEL 735

Query: 498  YLGQS---AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
            +L +     I    +    L  L +LDL GCK L+R+ TS  K  SL  L L  C NL+ 
Sbjct: 736  HLRECYHLRIIHDSAVGRFLDKLVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKE 795

Query: 555  FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
                                     + F     LE+  +  C  L  +  ++GSL+ L  
Sbjct: 796  I------------------------TDFSIASNLEIFDLRGCFSLRTIHKSVGSLDQLIA 831

Query: 615  I-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
            + L     + +LPS + L + L SL  ++C  +E  P  F   + ++  +++   A+R++
Sbjct: 832  LKLDFCHQLEELPSCLRLKS-LDSLSLTNCYKIEQLPE-FDENMKSLREMNLKGTAIRKL 889

Query: 674  PQEIAYLSSLEILYLS-GNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
            P  I YL  LE L LS   N  SLP+ I  +  L+ + L + + L  LP        L+ 
Sbjct: 890  PTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLKELDLRECSRLDMLPSGS----SLNF 945

Query: 733  IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELP--LCL 790
                +  +L +L   L++ +++  + L +L      L+ LNL   N    LP L     L
Sbjct: 946  PQRSLCSNLTILD--LQNCNISNSDFLENLSNFCTTLKELNLSG-NKFCCLPSLKNFTSL 1002

Query: 791  QLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLK 850
            +LL +RNC  L+++ +I  CL+ +DAS  E L   SPD                      
Sbjct: 1003 RLLELRNCKFLRNIVKIPHCLKRMDASGCELLVI-SPDY--------------------- 1040

Query: 851  LNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQS 910
                     +AD + R + +               KL   +  LIV   SEIP + +NQ+
Sbjct: 1041 ---------IADMMFRNQDL---------------KLRNFKRELIV-TYSEIPKFCNNQT 1075

Query: 911  SGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCF-RYFYVSFQ 955
            + SSI      H+S   +     C V    KVD+D F    ++ FQ
Sbjct: 1076 TESSISFSF-QHNSDMIIPALVVCVVF---KVDADSFVAEAFIHFQ 1117


>gi|297802316|ref|XP_002869042.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314878|gb|EFH45301.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1178

 Score =  300 bits (767), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 222/694 (31%), Positives = 349/694 (50%), Gaps = 87/694 (12%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE 68
           I+G+ GM GIGKTTL   +++ +   F    F+ DV   S+      + ++QM +  ++E
Sbjct: 233 IIGVVGMPGIGKTTLTSMLYENWQGGFLSRAFLHDVSQMSK-----RYTKRQMRNILMTE 287

Query: 69  -------KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
                  K +VA  + P   K  +  MK LIVLD+V++  Q+K L+ E D    GSRI+ 
Sbjct: 288 LLKEVDLKQKVADMS-PKSLKAHLLSMKSLIVLDNVSDKKQIKDLLEEDDWIKIGSRIIF 346

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNW--HSRSVVSYT 179
           TT D  V+E    +  ++ R+ G    ++F++F +FAF       + N+   SR  V Y 
Sbjct: 347 TTSDISVIEGMVDDTYEVQRLTG---RDSFDYFSHFAFNFKLPTPEGNFINLSRLFVDYA 403

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           KGNPLVL++LG  L  K++ +W   L +L    ES I  + D+L+IS++ L    K +FL
Sbjct: 404 KGNPLVLKILGVELSGKKEKYWTDKLREL---AESPIKKLQDVLRISYDGLGQLQKDVFL 460

Query: 240 DIACFFEGEDKDFVASILDDSESDVLD------ILIDKSLVSISGNFLNMHDILQEMGRQ 293
           D+ACFF   D  +V  +++  +++ +D       L  K L++ISG  + MHD+L   G++
Sbjct: 461 DVACFFRSGDDYYVRCLVESCDTEPIDGVSEIKDLASKFLINISGGRMEMHDLLYTFGKE 520

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMS 352
           +  Q      G R RLW+   I   LK   G D++ GIFLD+ ++K  + L+   FT M 
Sbjct: 521 LGSQSQ----GLR-RLWNHILIVGALKKRAGADSVRGIFLDMFELKKELPLEKCTFTEMR 575

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NLR  KFY  + ++          E  +  K+  P G+++   ++RYL+W  +PL  LP 
Sbjct: 576 NLRYLKFYSSRCHQ----------EGEADCKINFPEGVEFSLDEVRYLYWLKFPLEKLPK 625

Query: 413 NFKPKNLVELNLRCSKVEQPWEG---------------EKACVPSSIQNFKYLSALSFKG 457
           +F PKNL +LNL  S++E+ WEG                K C  + + N K L  L+ +G
Sbjct: 626 DFNPKNLTDLNLPYSEIEEVWEGLKDTPKLKWVDLSHSSKLCNLTGLLNAKSLQRLNLEG 685

Query: 458 CQSLRSFPS-----------------------NLHFVCPVTINFSYCVNLIEFPQISGKV 494
           C SL   PS                       +++ +   T+  + C +L EF  IS  +
Sbjct: 686 CTSLEELPSEMKSLENLVFLNMRGCTSLRVLPHMNLISMKTLILTNCSSLEEFQVISDNI 745

Query: 495 TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
             LYL  +AI ++P ++  L  L VL+L+ CK L+ +     +L++L  L+L GC  L+ 
Sbjct: 746 ETLYLDGTAIVQLPPNMVKLQRLIVLNLKDCKMLRAVPQCLGRLKALQELVLSGCSTLKT 805

Query: 555 FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
           FP  +E M+ L+ +  D T I E+P   +         VED  +L      + SL  L  
Sbjct: 806 FPVPIENMKCLQILLLDGTEIKEIPKILQYNSSK----VEDLRELRRGVKGLSSLRRL-- 859

Query: 615 ILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
            L+    IS L   ++    L+ LD  +CK L S
Sbjct: 860 CLSRNGMISNLQIDISQLYHLKWLDLKYCKNLTS 893



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 147/553 (26%), Positives = 233/553 (42%), Gaps = 100/553 (18%)

Query: 554  HFPEILE-KMEHLKRIYSDRTPITELPSSF----------------------ENLPGLEV 590
            +FPE +E  ++ ++ +Y  + P+ +LP  F                      ++ P L+ 
Sbjct: 598  NFPEGVEFSLDEVRYLYWLKFPLEKLPKDFNPKNLTDLNLPYSEIEEVWEGLKDTPKLKW 657

Query: 591  LFVEDCSKLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
            + +   SKL NL    N  SL+ L   L   +++ +LPS +     L  L+   C  L  
Sbjct: 658  VDLSHSSKLCNLTGLLNAKSLQRLN--LEGCTSLEELPSEMKSLENLVFLNMRGCTSLRV 715

Query: 649  FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLS-SLEILYLSGNNFESLPAIIKQMSQLR 707
             P   L+ +  + L + S        +E   +S ++E LYL G     LP  + ++ +L 
Sbjct: 716  LPHMNLISMKTLILTNCSSL------EEFQVISDNIETLYLDGTAIVQLPPNMVKLQRLI 769

Query: 708  FIHLEDFNMLQSLPELPLCLKYLH---LIDCKMLQSLPVLPF----CLESLDLTGCNMLR 760
             ++L+D  ML+++P+    LK L    L  C  L++ PV P     CL+ L L G     
Sbjct: 770  VLNLKDCKMLRAVPQCLGRLKALQELVLSGCSTLKTFPV-PIENMKCLQILLLDGT---- 824

Query: 761  SLPELPLCLQY--LNLEDCNMLR-------SLPELPLC-----------------LQLLT 794
             + E+P  LQY    +ED   LR       SL  L L                  L+ L 
Sbjct: 825  EIKEIPKILQYNSSKVEDLRELRRGVKGLSSLRRLCLSRNGMISNLQIDISQLYHLKWLD 884

Query: 795  VRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGK 854
            ++ C  L S+  +   L+ LDA   EKL   +  +   P+ ++     F FTNC KL   
Sbjct: 885  LKYCKNLTSISLLPPNLEILDAHGCEKLKTVASPMA-LPKLMEQVRSKFIFTNCNKLEQV 943

Query: 855  ANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSS 914
            A N I   +L   R   + +LR   E  ++E L      +   PGSE+P WF++Q+ GS 
Sbjct: 944  AKNSI---TLYAQRKCQLDALRCYKEGTVSEALL-----ITCFPGSEVPSWFNHQTFGSK 995

Query: 915  ICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYV--SFQFDLEIKTLSETKHVDLG 972
            + ++ PPH     L     CAV+   K   D    F +  + +F  E++T          
Sbjct: 996  LKLKFPPHWCDNGLSTLVLCAVV---KFPRDEINRFSIDCTCEFKNEVET---CIRFSCT 1049

Query: 973  YNSRYIEDL-IDSDRVILGFKPCLNV------GFPDGYHH----TIATFKFFAERKFYKI 1021
                +IE   IDSD V +G+    ++            HH    T A+ +F       +I
Sbjct: 1050 LGGGWIESRKIDSDHVFIGYTSSSHITKHLEGSLKSQEHHKYVPTEASIEFTVRHGAGEI 1109

Query: 1022 KRCGLCPVYANPS 1034
              CGL  VY  P+
Sbjct: 1110 VNCGLSLVYEEPN 1122


>gi|356515118|ref|XP_003526248.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1010

 Score =  300 bits (767), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 240/726 (33%), Positives = 356/726 (49%), Gaps = 106/726 (14%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+IVGI GMGGIGKTTLA  ++D+ SH+F+  CF+ +V       G +  L KQ+L  TL
Sbjct: 219 VRIVGICGMGGIGKTTLATVLYDRISHQFDAHCFIDNVSKTYRHCGQIGVL-KQLLHQTL 277

Query: 67  SEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
           +E L++   N+ H     + R+R +K +IVLD+VNEV QL++L+   +  G GSRI++ +
Sbjct: 278 NEDLQIC--NLYHAANLMQSRLRYVKSIIVLDNVNEVEQLEKLVLNREWLGAGSRIIIIS 335

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           RDK VL+K       +Y+V  L    + + FC  AF       D       V+ Y    P
Sbjct: 336 RDKHVLKK--CGVTVVYKVQLLNGANSLKLFCKKAFDSVDITGDYEELKYEVLKYANDLP 393

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L ++VLGS L  +  S+W      L+R+ E+   DI D+L+IS+++L    K IFLDIAC
Sbjct: 394 LAIKVLGSVLSGRSVSYWRSY---LDRLKENPNKDILDVLRISYDELQDLEKEIFLDIAC 450

Query: 244 FFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
           FF G ++ +V  +LD     S++ +  L+DKSL+  S  F+ MH++L+ +GR IV+  + 
Sbjct: 451 FFCGNEELYVKKVLDCCGFHSEIGIRALVDKSLIDNSSGFIEMHNLLKVLGRTIVKGNAP 510

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
           KEPGK SR+W  ++   + K  + T+  E I LD  +++ +  D  A + MSNLRL  F 
Sbjct: 511 KEPGKWSRVWLHEDFYNMSKATETTNN-EAIVLD-REMEILMADAEALSKMSNLRLLIFR 568

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
             KF  I                    N ++ L  KL++L W  YP   LPS+F+P  LV
Sbjct: 569 DVKFMGI-------------------LNSVNCLSNKLQFLEWYNYPFSYLPSSFQPNLLV 609

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
           EL L+ S ++Q W+G        I++   L AL                       + SY
Sbjct: 610 ELILQHSNIKQLWKG--------IKHLPNLRAL-----------------------DLSY 638

Query: 481 CVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS 540
             NLIE P   G                     + +LE + L GC  L RI  S   LR 
Sbjct: 639 SKNLIEAPDFGG---------------------VLNLEWIILEGCTNLARIHPSVGLLRK 677

Query: 541 LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
           L  L L  C++L   P  +  +  L  +      I+  P  F N   LE    E+ SK+ 
Sbjct: 678 LAFLNLKNCISLVSLPSNILSLSSLGYL-----NISGCPKVFSN-QLLEKPIHEEHSKMP 731

Query: 601 NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKG--LESFPRTFLLGLS 658
           ++       +      + +S+I +   ++   +   S    +  G  L S P  F     
Sbjct: 732 DIRQTAMQFQ------STSSSIFKRLINLTFRSSYYSRGYRNSAGCLLPSLPTFF----- 780

Query: 659 AMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
            M  L +S   + +IP  I  + SLE L L GNNF SLP  I Q+S+L  ++LE    L+
Sbjct: 781 CMRDLDLSFCNLSQIPDAIGSMHSLETLNLGGNNFVSLPYSINQLSKLVHLNLEHCKQLR 840

Query: 719 SLPELP 724
             PE+P
Sbjct: 841 YFPEMP 846



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 157/376 (41%), Gaps = 56/376 (14%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           I +L    ++LP L  L +     L   PD  G L   + IL   + ++++  SV L   
Sbjct: 618 IKQLWKGIKHLPNLRALDLSYSKNLIEAPDFGGVLNLEWIILEGCTNLARIHPSVGLLRK 677

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHIS------DYAVREIPQEIAYLSSLEILYL 688
           L  L+  +C  L S P   +L LS++G L+IS         + E P    + S +  +  
Sbjct: 678 LAFLNLKNCISLVSLPSN-ILSLSSLGYLNISGCPKVFSNQLLEKPIHEEH-SKMPDIRQ 735

Query: 689 SGNNFESLPA-IIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC 747
           +   F+S  + I K++  L F                    Y +   C +L SLP   FC
Sbjct: 736 TAMQFQSTSSSIFKRLINLTF------------RSSYYSRGYRNSAGC-LLPSLPTF-FC 781

Query: 748 LESLDLTGCNMLRSLPEL---PLCLQYLNLEDCNMLR---SLPELPLCLQLLTVRNCNRL 801
           +  LDL+ CN L  +P+       L+ LNL   N +    S+ +L   + L  + +C +L
Sbjct: 782 MRDLDLSFCN-LSQIPDAIGSMHSLETLNLGGNNFVSLPYSINQLSKLVHL-NLEHCKQL 839

Query: 802 QSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILA 861
           +  PE       + +     + + + +    P  L      F F NC K+   A      
Sbjct: 840 RYFPE-------MPSPTSLPVIRETYNFAHYPRGL------FIF-NCPKIVDIA------ 879

Query: 862 DSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
               R   M  A +    +++  E  + +    IV+PG++IP WF+NQS G+SI +   P
Sbjct: 880 ----RCWGMTFAWMIQILQVS-QESDTRIGWIDIVVPGNQIPKWFNNQSVGTSISLDPSP 934

Query: 922 HSSCRNLIGFAFCAVL 937
                + IG A C V 
Sbjct: 935 IMHGNHWIGIACCVVF 950


>gi|357468521|ref|XP_003604545.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505600|gb|AES86742.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1092

 Score =  299 bits (766), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 236/624 (37%), Positives = 333/624 (53%), Gaps = 39/624 (6%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG--GLEHLQKQM 61
           S+ V+++GIWGMGGIGKTT+A+ IF Q   E+EG CF++ V   SE  G  G+  L++++
Sbjct: 258 SEKVRVIGIWGMGGIGKTTIAEEIFKQNCSEYEGCCFLAKV---SEELGRHGITFLKEKL 314

Query: 62  LSTTLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            S  L+E +++  PN +  + + R+ RMK+LIVLDDV E GQ++ L G LD     SRI+
Sbjct: 315 FSRLLAEDVKIDSPNGLSSYIERRIGRMKVLIVLDDVKEEGQIEMLFGTLDWLLSDSRII 374

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           VTTRD +VL     E   +Y V  L+  EA E F   AFK+ H        S+ V+ Y K
Sbjct: 375 VTTRDMQVL--ICNEVDHVYEVGVLDSSEALELFNLNAFKQRHLETVYFELSKKVIDYAK 432

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PLVL+VL   L  K K  W   L  L R+   ++HD+   +++S++ L    K  FLD
Sbjct: 433 GIPLVLKVLAHMLRGKNKEVWESQLDKLKRLPVQKVHDV---MRLSYDDLDRLEKKYFLD 489

Query: 241 IACFFEGED--KDFVASILDDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEMGR 292
           IACFF G +   D++  +L D ESD      L+ L DK+L++IS  N ++MHDILQEMGR
Sbjct: 490 IACFFNGLNLKVDYMKLLLKDCESDNSVAVGLERLRDKALITISEDNIISMHDILQEMGR 549

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           ++VRQES  +P KRSRLWD  +I  VL+++KGTD I  I +DLS  + + L   AF  M+
Sbjct: 550 EVVRQESSADPRKRSRLWDHDDICDVLENDKGTDVIRSISVDLSGRRKLMLSSHAFAKMT 609

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NL+   F     +  + L +   +       V LP GL   P  LRYL W  YPL++ P 
Sbjct: 610 NLQFLDFRGEYEFGEDFLWNQKYDRD---CLVLLPQGLQSFPTDLRYLSWMNYPLKSFPE 666

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
            F  KNLV L+L  S VE+ W G        +Q+   L  +     + L+  P       
Sbjct: 667 KFSAKNLVILDLSDSLVEKLWCG--------VQDLVNLKEVRLSYSKFLKELPDFSKATN 718

Query: 473 PVTINFSYCVNLIEF-PQISG--KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
              +N ++C NL    P I    K+  L L         +S   L+ L  L+L  CK L+
Sbjct: 719 LKVLNMAHCHNLKSVHPSIFSLDKLVHLDLSLCFSLTTFASNSHLSSLHYLNLGSCKSLR 778

Query: 530 RISTSFCKLRSLVTLILLG-CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
             S +     +L+ L L   C+N    P        L+ +    + I  +PSS +NL  L
Sbjct: 779 TFSVT---TYNLIELDLTNICINA--LPSSFGCQSRLEILVLRYSEIESIPSSIKNLTRL 833

Query: 589 EVLFVEDCSKLDNLPDNIGSLEYL 612
             L +  CSKL  LP+   S+E L
Sbjct: 834 RKLDIRFCSKLLVLPELPSSVETL 857



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 150/351 (42%), Gaps = 67/351 (19%)

Query: 644 KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
           +GL+SFP T L  LS M      +Y ++  P++ +   +L IL LS +  E L   ++ +
Sbjct: 642 QGLQSFP-TDLRYLSWM------NYPLKSFPEKFS-AKNLVILDLSDSLVEKLWCGVQDL 693

Query: 704 SQLRFIHLEDFNMLQSLPELPLC--LKYLHLIDCKMLQSLPVLPFCLESL---DLTGCNM 758
             L+ + L     L+ LP+      LK L++  C  L+S+    F L+ L   DL+ C  
Sbjct: 694 VNLKEVRLSYSKFLKELPDFSKATNLKVLNMAHCHNLKSVHPSIFSLDKLVHLDLSLCFS 753

Query: 759 LRSLPELPL--CLQYLNLEDCNMLRS-------LPELPL---CLQLL------------- 793
           L +         L YLNL  C  LR+       L EL L   C+  L             
Sbjct: 754 LTTFASNSHLSSLHYLNLGSCKSLRTFSVTTYNLIELDLTNICINALPSSFGCQSRLEIL 813

Query: 794 ------------TVRNCNRLQSLP----EILLCLQELDASVLEKLSKHSPDLQWA----- 832
                       +++N  RL+ L       LL L EL +SV E L      L+       
Sbjct: 814 VLRYSEIESIPSSIKNLTRLRKLDIRFCSKLLVLPELPSSV-ETLLVECRSLKTVLFPST 872

Query: 833 -PESLKSAAICFEFTNCLKLNGKANNKI---LADSLLRIRHMAIASLRLGY-EMAINEKL 887
             E  K      EF NC  L+  +   I   L  +L++  +  +++L   + E  ++ K 
Sbjct: 873 VSEQFKENKKRIEFWNCWNLDEHSLINIGLNLQMNLIKFTYQHLSTLEHDHVESYVDYKD 932

Query: 888 S-ELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
           + +   ++ V PGS IP+W   +++   + + L PH     L+GF FC VL
Sbjct: 933 NFDSYQAVYVYPGSSIPEWLEYKTTKDDMIVDLSPH-YLSPLLGFVFCFVL 982



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 8/168 (4%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSN 633
           + ELP  F     L+VL +  C  L ++  +I SL+ L ++ L+   +++   S+  LS+
Sbjct: 707 LKELPD-FSKATNLKVLNMAHCHNLKSVHPSIFSLDKLVHLDLSLCFSLTTFASNSHLSS 765

Query: 634 MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF 693
            L  L+   CK L    RTF +    +  L +++  +  +P      S LEIL L  +  
Sbjct: 766 -LHYLNLGSCKSL----RTFSVTTYNLIELDLTNICINALPSSFGCQSRLEILVLRYSEI 820

Query: 694 ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           ES+P+ IK +++LR + +   + L  LPELP  ++ L L++C+ L+++
Sbjct: 821 ESIPSSIKNLTRLRKLDIRFCSKLLVLPELPSSVETL-LVECRSLKTV 867


>gi|240256011|ref|NP_193686.5| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658792|gb|AEE84192.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1210

 Score =  299 bits (766), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 236/715 (33%), Positives = 342/715 (47%), Gaps = 120/715 (16%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            D+ + V++VG+ GM GIGKTT+A  ++ Q    F+G  F+ D+  NS+  G L +L ++
Sbjct: 248 FDNDECVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDIEDNSKRYG-LPYLYQK 306

Query: 61  MLSTTL-SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           +L   L  E ++V     P   +  +R  KL IVLD+V E  Q++ LIG+ + + QGSRI
Sbjct: 307 LLHKLLDGENVDVRAQGRP---ENFLRNKKLFIVLDNVTEEKQIEYLIGKKNVYRQGSRI 363

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           V+ TRDK++L+K        Y V  L   EA E FC   F  ++  E+    S   V Y 
Sbjct: 364 VIITRDKKLLQK---NADATYVVPRLNDREAMELFCLQVFGNHYPTEEFVDLSNDFVCYA 420

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           KG PL L++LG  L     ++W K L  L    + E+      LK S+  L    KS+FL
Sbjct: 421 KGLPLALKLLGKGLLTHDINYWKKKLEFLQVNPDKELQKE---LKSSYKALDDDQKSVFL 477

Query: 240 DIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
           DIACFF  E                                  MHD+L  MG++I +++S
Sbjct: 478 DIACFFRIE----------------------------------MHDLLHAMGKEIGKEKS 503

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
            ++ G+R RLW+ K+I  +L+HN GT+ + GIFL++S+++ I L P AFT +S L+  KF
Sbjct: 504 IRKAGERRRLWNHKDIRDILEHNTGTECVRGIFLNMSEVRRIKLFPAAFTMLSKLKFLKF 563

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
           +           S   +    +   ++P   D+ P +L YLHW  YP   LPS+F PK L
Sbjct: 564 HSSHC-------SQWCDNDHIFQCSKVP---DHFPDELVYLHWQGYPYDCLPSDFDPKEL 613

Query: 420 VELNLRCSKVEQPWEGEK----------------------------------ACVP---- 441
           V+L+LR S ++Q WE EK                                   C      
Sbjct: 614 VDLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRAKNLERLDLEGCTSLDLL 673

Query: 442 SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ 501
            S++    L  L+ + C SL S P         T+  S C+ L +F  IS  +  L+L  
Sbjct: 674 GSVKQMNELIYLNLRDCTSLESLPKGFKIKSLKTLILSGCLKLKDFHIISESIESLHLEG 733

Query: 502 SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
           +AIE V   IE L  L +L+L+ C++LK +     KL+SL  L+L GC  LE  P I EK
Sbjct: 734 TAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLKSLQELVLSGCSALESLPPIKEK 793

Query: 562 MEHLKRIYSDRTPITELP--SSFENL-------------PGLEV-----------LFVED 595
           ME L+ +  D T I + P  S   NL              GL V           L++ +
Sbjct: 794 MECLEILLMDGTSIKQTPEMSCLSNLKICSFCRPVIDDSTGLVVLPFSGNSFLSDLYLTN 853

Query: 596 CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           C+ +D LPD   SL  L  +  + + I  LP S+     L  LD  HC  L+S P
Sbjct: 854 CN-IDKLPDKFSSLRSLRCLCLSRNNIETLPESIEKLYSLLLLDLKHCCRLKSLP 907


>gi|27764537|gb|AAO23067.1| R 12 protein [Glycine max]
          Length = 893

 Score =  299 bits (766), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 223/617 (36%), Positives = 316/617 (51%), Gaps = 88/617 (14%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V I+GI GMGG+GKTTLA A+++  +  F+ SCF+ +VR  S    GL+HLQ  
Sbjct: 199 VGSDDVVHIIGIHGMGGLGKTTLAMAVYNFIAPHFDESCFLQNVREES-NKHGLKHLQSV 257

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +LS  L EK       +     I H  +      K+L++LDDV++  QLK ++G+ D FG
Sbjct: 258 LLSKLLGEKDITLTSWQEGASMIQHRLRL----KKILLILDDVDKREQLKAIVGKPDWFG 313

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK +L+    E ++ Y VN L  ++AF+     AFK              
Sbjct: 314 PGSRVIITTRDKHLLKYH--EVERTYEVNVLNHDDAFQLLTWNAFKREKIDPSYKDVLNR 371

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV+Y  G PL LEV+GS+L  K  + W   L    RI  +EI     IL++SF+ L    
Sbjct: 372 VVTYASGLPLALEVIGSNLYGKTVAEWESALETYKRIPSNEI---LKILEVSFDALEEEQ 428

Query: 235 KSIFLDIACFFEG----EDKDFVASILDDSESDVLDILIDKSL---VSISGNFLNMHDIL 287
           K++FLDIAC F+G    E  D   ++  + +   + +L++KSL   VS   N + MHD++
Sbjct: 429 KNVFLDIACCFKGYKWTEVYDIFRALYSNCKMHHIGVLVEKSLLLKVSWRDN-VEMHDLI 487

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS---KIKGINLD 344
           Q+MGR I RQ S +EPGK  RLW PK+I +VLKHN GT  +E I LD S   K + +  +
Sbjct: 488 QDMGRDIERQRSPEEPGKCKRLWSPKDIIQVLKHNTGTSKLEIICLDSSISDKEETVEWN 547

Query: 345 PRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT 404
             AF  M NL++      KF                        G +Y P+ LR L W  
Sbjct: 548 ENAFMKMENLKILIIRNGKF----------------------SKGPNYFPEGLRVLEWHR 585

Query: 405 YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSF 464
           YP   LPSNF P NLV   L  S +                     ++L F G   L   
Sbjct: 586 YPSNCLPSNFDPINLVICKLPDSSI---------------------TSLEFHGSSKLGHL 624

Query: 465 PSNLHFVCPVTINFSYCVNLIEFPQISG--KVTRL-YLGQSAIEEVPSSIECLTDLEVLD 521
                      + F  C  L + P +S    +  L ++G  ++  +  SI  L  LE+L+
Sbjct: 625 ---------TVLKFDKCKFLTQIPDVSDLPNLRELSFVGCESLVAIDDSIGFLNKLEILN 675

Query: 522 LRGCKRLKRISTSF--CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP 579
             GC++L    TSF    L SL TL L  C +LE+FPEIL +ME++  ++ +R PI ELP
Sbjct: 676 AAGCRKL----TSFPPLNLTSLETLELSHCSSLEYFPEILGEMENITALHLERLPIKELP 731

Query: 580 SSFENLPGLEVLFVEDC 596
            SF+NL GL  + +  C
Sbjct: 732 FSFQNLIGLREITLRRC 748


>gi|357499913|ref|XP_003620245.1| Resistance protein [Medicago truncatula]
 gi|355495260|gb|AES76463.1| Resistance protein [Medicago truncatula]
          Length = 1607

 Score =  299 bits (765), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 276/845 (32%), Positives = 412/845 (48%), Gaps = 104/845 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S DTV +VGI GMGGIGKTTLA ++++  +HEF+ SCF+ +VR N E   GL +LQ  
Sbjct: 198 IGSDDTVHMVGIHGMGGIGKTTLALSVYNLIAHEFDASCFLENVRENHEKH-GLPYLQNI 256

Query: 61  MLSTTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           +LS  + EK  + G        ++R+R+ KLL++LDDVNE  QLK L G+   FG  SRI
Sbjct: 257 ILSKVVGEKNALTGVRQGISILEQRLRQKKLLLILDDVNEQEQLKALAGKHKWFGPSSRI 316

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH------SR 173
           ++TTRDK++L     E    Y V GL  ++AFE     AFK+   P D N          
Sbjct: 317 IITTRDKKLLTCHGVEH--TYEVRGLNAKDAFELVRWKAFKDEFSPSDENVSLAQLHVIE 374

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            VV+Y  G+PL LEV+GS    K        L    ++   +I      L+ISF+ L   
Sbjct: 375 RVVAYASGHPLALEVMGSHFSNKTIEQCKDALDRYEKVPHKKIQ---TTLQISFDALEDE 431

Query: 234 VKSIFLDIACFFEGEDKDFVASILDDSESDV----LDILIDKSLVSIS--GNFLNMHDIL 287
            K +FLDIAC F+G     V  IL     ++    +++L++KSL+ I+  GN + +HD++
Sbjct: 432 EKFVFLDIACCFKGCKLTRVDEILHAHHGEIVKDHINVLVEKSLIKINEFGN-VTLHDLV 490

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA 347
           ++MG++IVRQES ++PGKR+RLW   +I +VL+ N GT  IE I  D      +  D  A
Sbjct: 491 EDMGKEIVRQESPQDPGKRTRLWFSNDIMQVLEENTGTSQIEIIRFDCWTT--VAWDGEA 548

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F  M NL+   F    F+  +K P                    +LP  LR L       
Sbjct: 549 FKKMENLKTLIFSDYVFF--KKSPK-------------------HLPNSLRVLECHNPSS 587

Query: 408 RTLPS----NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRS 463
             L +    NF  KN    N+R   +E    G       +I     L  LS K C  L +
Sbjct: 588 DFLVALSLLNFPTKNFQ--NMRVLNLEG---GSGLVQIPNISGLSNLEKLSIKNCWKLIA 642

Query: 464 FPSNLHFVCPVTI-NFSYCVNLIEFPQIS-GKVTRLYL-GQSAIEEVPSSIECLTD-LEV 519
              ++ F+  + I     C+ +   P +    +  L+L G +++E  P  ++   D L+ 
Sbjct: 643 IDKSVGFLGKLKILRLINCIEIQSIPPLMLASLVELHLSGCNSLESFPPVLDGFGDKLKT 702

Query: 520 LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP 579
           +++  CK L+ I     KL SL TL L  C +LE+FP +++                   
Sbjct: 703 MNVIYCKMLRSIPP--LKLNSLETLDLSQCYSLENFPLVVDAF----------------- 743

Query: 580 SSFENLPGLEVLFVEDCSKLDNLPD-NIGSLEYLYYILAAASAISQLPSSV-ALSNMLRS 637
                L  L+ L V+ C KL ++P   + SLE L   L+   ++   P  V A    L++
Sbjct: 744 -----LGKLKTLNVKGCCKLTSIPPLKLNSLETLD--LSQCYSLENFPLVVDAFLGKLKT 796

Query: 638 LDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI-AYLSSLEIL-YLSGNNFES 695
           L+   C  L+S     L  L  + L H   Y +   P  +  +L  L+ L +   +N +S
Sbjct: 797 LNVESCHNLKSIQPLKLDSLIYLNLSHC--YNLENFPSVVDEFLGKLKTLCFAKCHNLKS 854

Query: 696 LPAIIKQMSQLRFIHLEDFNMLQSLPELPLC------LKYLHLIDCKMLQSLPVLPF-CL 748
           +P +  +++ L  +     + L+S P  P+       LK L +  C  L+S+P L    L
Sbjct: 855 IPPL--KLNSLETLDFSSCHRLESFP--PVVDGFLGKLKTLLVRKCYNLKSIPPLKLDSL 910

Query: 749 ESLDLTGCNMLRSLP----ELPLCLQYLNLEDCNMLRSLPELPLC-LQLLTVRNCNRLQS 803
           E LDL+ C  L S P     L   L++LN+E C MLR++P L L  L+   +  C  L+S
Sbjct: 911 EKLDLSCCCSLESFPCVVDGLLDKLKFLNIECCIMLRNIPRLRLTSLEYFNLSCCYSLES 970

Query: 804 LPEIL 808
            PEIL
Sbjct: 971 FPEIL 975



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 166/391 (42%), Gaps = 75/391 (19%)

Query: 381  YSKVQLPNGLDYLPKKLRYLHWDT-YPLRTLPSNFKPKNLVELNL-RCSKVEQPWEGEKA 438
            YS    P  +D    KL+ L+ ++ + L+++    K  +L+ LNL  C  +E        
Sbjct: 778  YSLENFPLVVDAFLGKLKTLNVESCHNLKSIQP-LKLDSLIYLNLSHCYNLEN------- 829

Query: 439  CVPSSIQNF-KYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS----GK 493
              PS +  F   L  L F  C +L+S P  L      T++FS C  L  FP +     GK
Sbjct: 830  -FPSVVDEFLGKLKTLCFAKCHNLKSIPP-LKLNSLETLDFSSCHRLESFPPVVDGFLGK 887

Query: 494  VTRLYLGQS-----------------------AIEEVPSSIECLTD-LEVLDLRGCKRLK 529
            +  L + +                        ++E  P  ++ L D L+ L++  C  L+
Sbjct: 888  LKTLLVRKCYNLKSIPPLKLDSLEKLDLSCCCSLESFPCVVDGLLDKLKFLNIECCIMLR 947

Query: 530  RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
             I     +L SL    L  C +LE FPEIL +M ++  +  D TPI E+P  F+ L   +
Sbjct: 948  NIPR--LRLTSLEYFNLSCCYSLESFPEILGEMRNIPGLLKDDTPIKEIPFPFKTLTQPQ 1005

Query: 590  VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
             L   DC  +  LP+ + +L                  ++     + ++ SSH K     
Sbjct: 1006 TLC--DCGYV-YLPNRMSTLAKF---------------TIRNEEKVNAIQSSHVK----- 1042

Query: 650  PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
                      + + H+   +   + + +   ++++ L+L+ N+F  +P  I+    L  +
Sbjct: 1043 ---------YICVRHVGYRSEEYLSKSLMLFANVKELHLTSNHFTVIPKSIENCQFLWKL 1093

Query: 710  HLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
             L+D   L+ +  +P CL+ L  ++CK L S
Sbjct: 1094 ILDDCTALKEIKGIPPCLRMLSALNCKSLTS 1124



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 162/379 (42%), Gaps = 51/379 (13%)

Query: 450  LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS----GKVTRLYLGQ-SAI 504
            L  L+ + C +L+S    L     + +N S+C NL  FP +     GK+  L   +   +
Sbjct: 794  LKTLNVESCHNLKSIQP-LKLDSLIYLNLSHCYNLENFPSVVDEFLGKLKTLCFAKCHNL 852

Query: 505  EEVPSSIECLTDLEVLDLRGCKRLKR---ISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            + +P     L  LE LD   C RL+    +   F  L  L TL++  C NL+  P +  K
Sbjct: 853  KSIPPLK--LNSLETLDFSSCHRLESFPPVVDGF--LGKLKTLLVRKCYNLKSIPPL--K 906

Query: 562  MEHLKRI-YSDRTPITELPSSFENL-PGLEVLFVEDCSKLDNLPD-NIGSLEYLYYILAA 618
            ++ L+++  S    +   P   + L   L+ L +E C  L N+P   + SLEY       
Sbjct: 907  LDSLEKLDLSCCCSLESFPCVVDGLLDKLKFLNIECCIMLRNIPRLRLTSLEYF------ 960

Query: 619  ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIA 678
                                + S C  LESFP       +  GLL   D  ++EIP    
Sbjct: 961  --------------------NLSCCYSLESFPEILGEMRNIPGLLK-DDTPIKEIPFPFK 999

Query: 679  YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
             L+  + L   G  +  LP  +  +++    + E  N +QS     +C++++     + L
Sbjct: 1000 TLTQPQTLCDCG--YVYLPNRMSTLAKFTIRNEEKVNAIQSSHVKYICVRHVGYRSEEYL 1057

Query: 739  QSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLN---LEDCNMLRSLPELPLCLQLLTV 795
                +L   ++ L LT  N    +P+     Q+L    L+DC  L+ +  +P CL++L+ 
Sbjct: 1058 SKSLMLFANVKELHLTS-NHFTVIPKSIENCQFLWKLILDDCTALKEIKGIPPCLRMLSA 1116

Query: 796  RNCNRLQSLPEILLCLQEL 814
             NC  L S  +  L  QEL
Sbjct: 1117 LNCKSLTSSCKSKLLNQEL 1135


>gi|449483059|ref|XP_004156482.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like,
           partial [Cucumis sativus]
          Length = 786

 Score =  299 bits (765), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 211/613 (34%), Positives = 318/613 (51%), Gaps = 86/613 (14%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVA----GP 75
           KTTLAKA++++ +++FEG CF+S+VR  S+   GL  LQ+++L   L   L++     G 
Sbjct: 232 KTTLAKALYNKIANQFEGFCFLSNVRETSKQFNGLVQLQEKLLYEILKFDLKIGNLDEGI 291

Query: 76  NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGE 135
           NI    + R+R  K+LIVLDDV+ + QL+ L+GE D FG GS+I+VTTR+  +L     +
Sbjct: 292 NI---IRSRLRSKKVLIVLDDVDNLKQLEALVGERDWFGHGSKIIVTTRNSHLLSSHEFD 348

Query: 136 EKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
           EK  Y V  L    + E F   AFK++H   +    S+  ++Y KG+PL L VLGS LC 
Sbjct: 349 EK--YGVRELSHGHSLELFSWHAFKKSHPSSNYLDLSKRAINYCKGHPLALVVLGSFLCT 406

Query: 196 KRKSHWGKVLHDL-NRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVA 254
           + +  W  +L +  N + E    DI  I++ISF+ L  ++K IFLDI+C F GE  ++V 
Sbjct: 407 RDQIKWRTILDEFENSLSE----DIEHIIQISFDGLEEKIKEIFLDISCLFVGEKVNYVK 462

Query: 255 SILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
           S+L+     +   + +L+D SL+++    + MHD++++MG++IV  ES  EPGKRSRLW 
Sbjct: 463 SVLNTCHFSLDFGIIVLMDLSLITVENEEVQMHDLIRQMGQKIVNGESF-EPGKRSRLWL 521

Query: 312 PKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
             ++ +V   N GT A++ I LDLS    +++D RAF NM NLRL      +F       
Sbjct: 522 VHDVLKVFADNSGTIAVKAIKLDLSNPTRLDVDSRAFRNMKNLRLLIVRNARF------- 574

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
                             ++YLP  L+++ W  +  R LP +F  KNLV L+LR S +  
Sbjct: 575 ---------------STNVEYLPDNLKWIKWHGFSHRFLPLSFLKKNLVGLDLRHSLIRN 619

Query: 432 PWEGEKACVPSSIQNFKY---------------LSALSFKGCQSLRSFPSNLHFVCP-VT 475
             +G K C      +  Y               L  L    C +LR+ P ++  +   +T
Sbjct: 620 LGKGFKDCKRLKHVDLSYSSLLEKIPDFPATSNLEELYLNNCTNLRTIPKSVVSLGKLLT 679

Query: 476 INFSYCVNLIEFPQI----SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
           ++  +C NLI+ P      S KV +L   +  +E++P      ++LE L L+ C  L+ I
Sbjct: 680 LDLDHCSNLIKLPSYLMLKSLKVLKLAYCKK-LEKLP-DFSTASNLEXLYLKECTNLRMI 737

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
             S   L  LVTL L  C NLE  P                        S+  L  LE L
Sbjct: 738 HDSIGSLSKLVTLDLGKCSNLEKLP------------------------SYLTLKSLEYL 773

Query: 592 FVEDCSKLDNLPD 604
            +  C KL+ +PD
Sbjct: 774 NLAHCKKLEEIPD 786



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 130/324 (40%), Gaps = 81/324 (25%)

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEV-LDLRGCKRLKRISTSFCKLRSLVTLILLGC- 549
           GK +RL+L    ++    +   +    + LDL    RL   S +F  +++L  LI+    
Sbjct: 514 GKRSRLWLVHDVLKVFADNSGTIAVKAIKLDLSNPTRLDVDSRAFRNMKNLRLLIVRNAR 573

Query: 550 --LNLEHFPEILEKMEHLKRIYSDRTPITELPSSF--ENLPGLEVLF---------VEDC 596
              N+E+ P+      +LK I         LP SF  +NL GL++            +DC
Sbjct: 574 FSTNVEYLPD------NLKWIKWHGFSHRFLPLSFLKKNLVGLDLRHSLIRNLGKGFKDC 627

Query: 597 SKL-----------DNLPD--NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
            +L           + +PD     +LE LY  L   + +  +P SV     L +LD  HC
Sbjct: 628 KRLKHVDLSYSSLLEKIPDFPATSNLEELY--LNNCTNLRTIPKSVVSLGKLLTLDLDHC 685

Query: 644 KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
             L   P   +L   ++ +L ++     E   + +  S+LE LYL            K+ 
Sbjct: 686 SNLIKLPSYLML--KSLKVLKLAYCKKLEKLPDFSTASNLEXLYL------------KEC 731

Query: 704 SQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLP 763
           + LR IH    + + SL +L                          +LDL  C+ L  LP
Sbjct: 732 TNLRMIH----DSIGSLSKLV-------------------------TLDLGKCSNLEKLP 762

Query: 764 E-LPL-CLQYLNLEDCNMLRSLPE 785
             L L  L+YLNL  C  L  +P+
Sbjct: 763 SYLTLKSLEYLNLAHCKKLEEIPD 786


>gi|42562922|ref|NP_176590.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196067|gb|AEE34188.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 997

 Score =  299 bits (765), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 214/655 (32%), Positives = 335/655 (51%), Gaps = 95/655 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETA---GGLE-HLQK 59
           +D V++V I G  GIGK+T+ +A+    S+ F  +CFV ++RG+        GL+  LQ+
Sbjct: 205 NDEVKMVAISGPAGIGKSTIGRALHSLLSNRFHHTCFVDNLRGSHPIGLDEYGLKLRLQE 264

Query: 60  QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           Q+LS  L++     G  I H    KER+  MK+ I+LDDVN+V QL+ L  E + FG GS
Sbjct: 265 QLLSKILNQD----GSRICHLGAIKERLCDMKVFIILDDVNDVKQLEALANESNWFGPGS 320

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+VTT +K +L++        Y V     EEA +  C +AF+++         +RSV  
Sbjct: 321 RIIVTTENKELLKQH--GINNTYYVGFPSDEEAIKILCRYAFRQSSSRHGFKKLTRSVTE 378

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                PL L V+GSSL  K +  W  V+  L  I +    DI  +L++ +  L    +S+
Sbjct: 379 LCGKLPLGLRVVGSSLHGKNEEEWEYVIRRLETIID---RDIEQVLRVGYESLHENEQSL 435

Query: 238 FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF-LNMHDILQEMGRQ 293
           FL IA FF  ED D V ++L +++ D+   L+IL++KSL+ IS +  + MH +LQ +GRQ
Sbjct: 436 FLHIAIFFNYEDGDLVKAMLAENDLDIEHELNILVNKSLIYISTDGRIRMHKLLQLVGRQ 495

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
             ++E   EP KR  L D +EI  VL+++ GT A+ GI  D S I  +++  +A   M N
Sbjct: 496 ANQRE---EPWKRRILIDAQEICHVLENDIGTGAVSGILFDTSGINEVSISNKALRRMCN 552

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LR    Y  K                 Y+++ +P  +++ P +LR LHWD YP + LP  
Sbjct: 553 LRFLSVYKTK--------------HDGYNRMDIPEDMEF-PPRLRLLHWDAYPSKCLPLK 597

Query: 414 FKPKNLVELNLRCSKVEQPWEGEK------------------------------------ 437
           F+ +NLVEL+++ S++E  W G +                                    
Sbjct: 598 FRAENLVELDMKDSRLEYLWPGTQLLTKLKKLNLEGSYNLKELPDLSNATNLEMLDLSVC 657

Query: 438 ---ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
              A +PSSI+N   L  +    C+SL   P+N++     T+  + C  L  FP  S K+
Sbjct: 658 LALAELPSSIKNLHKLDVIYMDLCESLHMIPTNINLASLETMYMTGCPQLKTFPAFSTKI 717

Query: 495 TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSL------VTLILLG 548
            RLYL ++ +EEVP+SI   + L  +DL G + LK I+     L++L      + +I   
Sbjct: 718 KRLYLVRTGVEEVPASITHCSRLLKIDLSGSRNLKSITHLPSSLQTLDLSSTDIEMIADS 777

Query: 549 CLNLEHFPEILEKMEHLKRIYSDR-TPITELPSSFENLPGLEVLFVEDCSKLDNL 602
           C+      + L++++HL+     +   + ELP+S      L +L  EDC  L+ +
Sbjct: 778 CI------KDLQRLDHLRLCRCRKLKSLPELPAS------LRLLTAEDCESLERV 820



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 178/449 (39%), Gaps = 120/449 (26%)

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEH-------FPEILEKMEHLKRIYSDRTPITELPS 580
           +  +S S   LR +  L  L     +H        PE +E    L+ ++ D  P   LP 
Sbjct: 537 INEVSISNKALRRMCNLRFLSVYKTKHDGYNRMDIPEDMEFPPRLRLLHWDAYPSKCLPL 596

Query: 581 SF--ENL--------------PGLEVLFV------EDCSKLDNLPD--NIGSLEYLYYIL 616
            F  ENL              PG ++L        E    L  LPD  N  +LE L   L
Sbjct: 597 KFRAENLVELDMKDSRLEYLWPGTQLLTKLKKLNLEGSYNLKELPDLSNATNLEMLD--L 654

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY-AVREIPQ 675
           +   A+++LPSS+   + L  +    C+ L   P    + L+++  ++++    ++  P 
Sbjct: 655 SVCLALAELPSSIKNLHKLDVIYMDLCESLHMIPTN--INLASLETMYMTGCPQLKTFP- 711

Query: 676 EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL--I 733
             A+ + ++ LYL     E +PA I   S+L  I L     L+S+  LP  L+ L L   
Sbjct: 712 --AFSTKIKRLYLVRTGVEEVPASITHCSRLLKIDLSGSRNLKSITHLPSSLQTLDLSST 769

Query: 734 DCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLL 793
           D +M+        C++ L        + L  L LC        C  L+SLPELP  L+LL
Sbjct: 770 DIEMIAD-----SCIKDL--------QRLDHLRLC-------RCRKLKSLPELPASLRLL 809

Query: 794 TVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNG 853
           T  +C  L+ +   L                ++P  Q              FTNCLKL  
Sbjct: 810 TAEDCESLERVTYPL----------------NTPTGQ------------LNFTNCLKLGE 841

Query: 854 KANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGS 913
           +A   I+  SL  ++H                            PGS +P  F++++ G+
Sbjct: 842 EAQRVIIQQSL--VKHAC-------------------------FPGSVMPSEFNHRARGN 874

Query: 914 SICIQLPPHSSCRNLIGFAFCAVLDSKKV 942
           S+ I +   +S      F  C ++  +++
Sbjct: 875 SLKILVKSSAS----FAFKACVLISPRQL 899


>gi|147859369|emb|CAN83953.1| hypothetical protein VITISV_018322 [Vitis vinifera]
          Length = 996

 Score =  299 bits (765), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 238/735 (32%), Positives = 357/735 (48%), Gaps = 120/735 (16%)

Query: 89  KLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFE 148
           K LIVLDDV+++ QL+ L+G    +G+GS I++TTRDK+ L   + +   +Y V GL+  
Sbjct: 118 KALIVLDDVDDMDQLEFLVGNHAWYGKGSIIIITTRDKQCLNTLKVD--YLYEVEGLKDY 175

Query: 149 EAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDL 208
           EA + F  +A + N   +D  + S  V+ Y +G PL L+VLGS LC K K  W   LH L
Sbjct: 176 EALKLFSQYASEPNLPKKDFKFLSYRVIHYCEGLPLALKVLGSLLCGKTKGEWTSELHKL 235

Query: 209 NRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSE---SDVL 265
            +  E +I ++   LKISF+ L    + I LDIACFF+GEDKDF   I D  E      +
Sbjct: 236 EKEPEMKIDNL---LKISFDGLETTPQMILLDIACFFQGEDKDFALKIWDGYELYGERNI 292

Query: 266 DILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGT 325
            +L+ + L++IS N L+MH ++++M ++IVR++  K+P K SRLW+  +I       KG 
Sbjct: 293 GVLLQRCLITISNNRLHMHGLIEKMCKKIVREQHPKDPSKWSRLWNQDDIYCAFVSEKGM 352

Query: 326 DAIEGIFLDLSK-------IKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQ 378
           + +E I LDLS+        K +    + F  M  LRL K Y     E            
Sbjct: 353 ENVETISLDLSRSKEKWFTTKIVAQMKKVFAKMQKLRLLKVYYSHGVE------------ 400

Query: 379 LSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA 438
               K+ LP G ++ P  L YLHW+   L +LPSNF  + LV ++L+ S +++   GEK 
Sbjct: 401 ---CKMLLPKGFEF-PPNLNYLHWEG--LVSLPSNFHGEKLVAISLKNSNIKELLIGEK- 453

Query: 439 CVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK----- 493
           C+         L  +     Q L   P          +N   CVN  +     GK     
Sbjct: 454 CLAE-------LKFIDLSNSQQLSKIPKLSRMPKLEILNLGGCVNFCKLHSSIGKFFEMK 506

Query: 494 -VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKR------------------------L 528
            +  L   +S I E+PSSI  LT LE L L  C +                        +
Sbjct: 507 FLRVLNFRESGIRELPSSIGSLTSLESLWLSKCSKFEKFPDNFFVTMRRLRILGLSDSGI 566

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
           K + TS   L +L  L+L  C N E FPEI + ME+L R+  + + I EL     +LP L
Sbjct: 567 KELPTSIECLEALEVLLLDNCSNFEKFPEIQKNMENLDRLNLEDSGIKELSCLIGHLPRL 626

Query: 589 EVLFVEDCSKLDNLPDNIGSLEYLY--YILAAA-----------------SAISQLPSSV 629
             L +  C  L ++P  I  LE L   Y+   +                 SAI++LPSS+
Sbjct: 627 VSLELSKCKNLRSVPSGILQLESLRMCYLFDCSNLIMEDMEHSKGLSLRESAITELPSSI 686

Query: 630 ALSNMLRSLDSSHCKGLESFPRTFLL-------------------GLSAMGLLHIS---- 666
            L  ML     S+C+ LE+ P +  +                    L +M L  ++    
Sbjct: 687 RL--ML-----SNCENLETLPNSIGMTRVSELVVHNCPKLHKLPDNLRSMQLTELNVSGC 739

Query: 667 DYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC 726
           +     IP ++  L SL+ L +SGNN + +P  I ++S+LR++ + +  ML+ +PELP  
Sbjct: 740 NLMAGAIPDDLWCLFSLKDLNVSGNNIDCIPGGIIRLSRLRYLTMNNCLMLKEIPELPSS 799

Query: 727 LKYLHLIDCKMLQSL 741
           L+ +    C +L++L
Sbjct: 800 LRQIEAYGCPLLETL 814



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 148/601 (24%), Positives = 226/601 (37%), Gaps = 142/601 (23%)

Query: 417 KNLVELNLRCSKVEQPWEGEKAC-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
           +N+  ++L  S+ ++ W   K       V + +Q  + L      G +     P    F 
Sbjct: 353 ENVETISLDLSRSKEKWFTTKIVAQMKKVFAKMQKLRLLKVYYSHGVECKMLLPKGFEF- 411

Query: 472 CPVTINFSYCVNLIEFPQ--ISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
            P  +N+ +   L+  P      K+  + L  S I+E+    +CL +L+ +DL   ++L 
Sbjct: 412 -PPNLNYLHWEGLVSLPSNFHGEKLVAISLKNSNIKELLIGEKCLAELKFIDLSNSQQLS 470

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
           +I                                                     +P LE
Sbjct: 471 KIP------------------------------------------------KLSRMPKLE 482

Query: 590 VLFVEDCSKLDNLPDNIGS---LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
           +L +  C     L  +IG    +++L  +    S I +LPSS+     L SL  S C   
Sbjct: 483 ILNLGGCVNFCKLHSSIGKFFEMKFLRVLNFRESGIRELPSSIGSLTSLESLWLSKCSKF 542

Query: 647 ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQ 705
           E FP  F + +  + +L +SD  ++E+P  I  L +LE+L L   +NFE  P I K M  
Sbjct: 543 EKFPDNFFVTMRRLRILGLSDSGIKELPTSIECLEALEVLLLDNCSNFEKFPEIQKNMEN 602

Query: 706 LRFIHLEDFN------MLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLD---LTGC 756
           L  ++LED        ++  LP L      L L  CK L+S+P     LESL    L  C
Sbjct: 603 LDRLNLEDSGIKELSCLIGHLPRLV----SLELSKCKNLRSVPSGILQLESLRMCYLFDC 658

Query: 757 NML---------------RSLPELPLCLQYLNLEDCNMLRSLPELPLCLQL--LTVRNCN 799
           + L                ++ ELP  ++ L L +C  L +LP      ++  L V NC 
Sbjct: 659 SNLIMEDMEHSKGLSLRESAITELPSSIR-LMLSNCENLETLPNSIGMTRVSELVVHNCP 717

Query: 800 RLQSLPEILLCLQ--ELDASVLEKLSKHSPDLQWAPESLKSAAIC--------------- 842
           +L  LP+ L  +Q  EL+ S    ++   PD  W   SLK   +                
Sbjct: 718 KLHKLPDNLRSMQLTELNVSGCNLMAGAIPDDLWCLFSLKDLNVSGNNIDCIPGGIIRLS 777

Query: 843 ----FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSL---- 894
                   NCL L        L  SL +I       L      A +   S L   L    
Sbjct: 778 RLRYLTMNNCLMLKEIPE---LPSSLRQIEAYGCPLLETLSSDAKHPLWSSLHNCLKSRI 834

Query: 895 --------------------IVLPGSE-IPDWFSNQSSGSSICIQLPPH-SSCRNLIGFA 932
                               +V+PGS  IP+W S++S G  I I LP +     N +GFA
Sbjct: 835 QDFECPTDSEDWIRKYLDVQVVIPGSRGIPEWISHKSMGHEITIDLPKNWYEDNNFLGFA 894

Query: 933 F 933
            
Sbjct: 895 L 895


>gi|356506581|ref|XP_003522058.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1166

 Score =  298 bits (764), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 208/593 (35%), Positives = 311/593 (52%), Gaps = 76/593 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML- 62
           S+ V I+G+WGMGGIGKTT+AKAI+++    FEG  F++ +R   E   G  +LQ+Q+L 
Sbjct: 251 SNDVLILGMWGMGGIGKTTIAKAIYNKIGRNFEGKSFLAHIREVWEQDAGQVYLQEQLLF 310

Query: 63  ---STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
                T ++   V    +    KER+R  ++L++LDDVN++ QL  L G  + FG GSRI
Sbjct: 311 DIKKETNTKIRNVESGKV--MLKERLRHKRVLLILDDVNKLHQLNVLCGSREWFGSGSRI 368

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TTRD  +L   R +  K++R+ G++ +E+ E F   AFK+    ED    SR++V+Y+
Sbjct: 369 IITTRDMHILRGRRVD--KVFRMKGMDEDESIELFSWHAFKQASPREDFIELSRNLVAYS 426

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIF 238
            G PL LEVLGS L       W  VL  L +I   E+ +    LKIS++ LT    K IF
Sbjct: 427 AGLPLALEVLGSYLFDMEVIEWKNVLEKLKKIPNDEVQEK---LKISYDGLTDDTEKGIF 483

Query: 239 LDIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQI 294
           LDIACFF G D++ V  IL+       + + +L+++SLV++   N L MHD+L++MGR+I
Sbjct: 484 LDIACFFIGMDRNDVIHILNGCGLCAENGIRVLVERSLVTVDYKNKLGMHDLLRDMGREI 543

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           +R ++  E  +RSRLW  ++   VL    GT AIEG+ L L +     L  +AF  M  L
Sbjct: 544 IRSKTPMELEERSRLWFHEDALDVLSKETGTKAIEGLALKLPRNNTKCLSTKAFKEMKKL 603

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL                      L  + VQL     YL K LR+L W  +PL  +P+N 
Sbjct: 604 RL----------------------LQLAGVQLVGDFKYLSKDLRWLCWHGFPLACIPTNL 641

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
              +LV + L  S V   W+  +      I N                   S+ H++   
Sbjct: 642 YQGSLVSIELENSNVNLLWKEAQVMEKLKILNL------------------SHSHYLTQ- 682

Query: 475 TINFSYCVNL-----IEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
           T +FS   NL     I+ P++S              E+  +I  L  + +++ + C  L+
Sbjct: 683 TPDFSNLPNLEKLLLIDCPRLS--------------EISYTIGHLNKVLLINFQDCISLR 728

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
           ++  S  KL+SL  LIL GCL ++   E LE+ME L  + +D+T IT +P S 
Sbjct: 729 KLPRSIYKLKSLKALILSGCLKIDKLEEDLEQMESLTTLIADKTAITRVPFSI 781



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 18/227 (7%)

Query: 432 PWEGEKACVPSSIQNFKYLSALSFKGCQSLRSF---PSNLHFVCPVTINFSYCVNLIEFP 488
           P    K     + +  K L  L   G Q +  F     +L ++C       + +  I   
Sbjct: 585 PRNNTKCLSTKAFKEMKKLRLLQLAGVQLVGDFKYLSKDLRWLCW----HGFPLACIPTN 640

Query: 489 QISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG 548
              G +  + L  S +  +    + +  L++L+L     L + +  F  L +L  L+L+ 
Sbjct: 641 LYQGSLVSIELENSNVNLLWKEAQVMEKLKILNLSHSHYLTQ-TPDFSNLPNLEKLLLID 699

Query: 549 CLNLEHFPEILEKMEHLKRI----YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
           C  L    EI   + HL ++    + D   + +LP S   L  L+ L +  C K+D L +
Sbjct: 700 CPRL---SEISYTIGHLNKVLLINFQDCISLRKLPRSIYKLKSLKALILSGCLKIDKLEE 756

Query: 605 NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
           ++  +E L  ++A  +AI+++P S+  S  +  +  S C G E F R
Sbjct: 757 DLEQMESLTTLIADKTAITRVPFSIVRSKRIGYI--SLC-GYEGFSR 800


>gi|27466164|gb|AAN86124.1| TIR-NBS-LRR [Arabidopsis thaliana]
          Length = 1055

 Score =  298 bits (764), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 208/637 (32%), Positives = 327/637 (51%), Gaps = 88/637 (13%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-----LQ 58
           SD V+++GIWG  GIGKTT+A+A+FD+ S  F   CF+ +++G+    G  +H     LQ
Sbjct: 204 SDEVKMIGIWGPAGIGKTTIARALFDRLSSIFPLICFMENLKGS--LTGVADHDSKLRLQ 261

Query: 59  KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            Q+LS  L+++       I H    +ER+   ++LI+LDDV+++ QL+ L  +   FG G
Sbjct: 262 NQLLSKILNQE----NMKIHHLGAIRERLHDQRVLIILDDVDDLEQLEVLAEDPSWFGSG 317

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI+VTT DK++L+  R   K IY VN    +EA E  C   FK++  P+     +  V 
Sbjct: 318 SRIIVTTEDKKILKAHR--IKDIYHVNFPSKKEALEILCLSTFKQSSIPDGFEELANKVA 375

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
                 PL L V+GSSL  + K  W   L  +    + +I      LK+ + +L+ + +S
Sbjct: 376 ELCGNLPLGLRVVGSSLRGESKQEWELQLSSIEASLDGKIETT---LKVGYERLSKKNQS 432

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS--GNFLNMHDILQEMG 291
           +FL IACFF  ++ D+V ++L D   DV    +IL D+SLV IS  G+ + MH +LQ++G
Sbjct: 433 LFLHIACFFNNQEVDYVTALLADRNLDVGNGFNILADRSLVRISTYGDIV-MHHLLQQLG 491

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           RQIV ++S+ EPGKR  + +P+EI  VL    GT +++GI  D S  + +++   AF  M
Sbjct: 492 RQIVHEQSD-EPGKREFIIEPEEIRDVLTDETGTGSVKGISFDASNSEEVSVGKGAFEGM 550

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NL+  + Y   F               S   +Q+P  + YLP  +R LHW+ YP ++LP
Sbjct: 551 PNLQFLRIYREYFN--------------SEGTLQIPEDMKYLPP-VRLLHWENYPRKSLP 595

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKAC-------------------------------- 439
             F P++LV++ +  SK+++ W G +                                  
Sbjct: 596 QRFHPEHLVKIYMPRSKLKKLWGGIQPLPNIKSIDLSFSIRLKEIPNLSNATNLETLNLT 655

Query: 440 -------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
                  +PSSI N   L  L   GC++LR  P+N++      ++ S C  L  FP IS 
Sbjct: 656 HCKTLVELPSSISNLHKLKKLKMSGCENLRVIPTNINLASLERLDMSGCSRLRTFPDISS 715

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
            +  L LG + IE+VP S+ C + L  L++  C  L R+      +   +T+++L   ++
Sbjct: 716 NIDTLNLGDTKIEDVPPSVGCWSRLIQLNI-SCGPLTRL----MHVPPCITILILKGSDI 770

Query: 553 EHFPEILEKMEHLKRIYSDR----TPITELPSSFENL 585
           E  PE +  +  L  +  +       I  LPSS + L
Sbjct: 771 ERIPESIIGLTRLHWLIVESCIKLKSILGLPSSLQGL 807



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 128/332 (38%), Gaps = 96/332 (28%)

Query: 657 LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM 716
           L  + LLH  +Y  + +PQ   +   L  +Y+  +  + L   I+ +  ++ I L     
Sbjct: 578 LPPVRLLHWENYPRKSLPQRF-HPEHLVKIYMPRSKLKKLWGGIQPLPNIKSIDLSFSIR 636

Query: 717 LQSLPEL--PLCLKYLHLIDCKMLQSLP---------------------VLP-----FCL 748
           L+ +P L     L+ L+L  CK L  LP                     V+P       L
Sbjct: 637 LKEIPNLSNATNLETLNLTHCKTLVELPSSISNLHKLKKLKMSGCENLRVIPTNINLASL 696

Query: 749 ESLDLTGCNMLRSLPELPLCLQYLNLED----------------------CNMLRSLPEL 786
           E LD++GC+ LR+ P++   +  LNL D                      C  L  L  +
Sbjct: 697 ERLDMSGCSRLRTFPDISSNIDTLNLGDTKIEDVPPSVGCWSRLIQLNISCGPLTRLMHV 756

Query: 787 PLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPE----------SL 836
           P C+ +L ++  + ++ +PE ++ L  L   ++E   K    L               SL
Sbjct: 757 PPCITILILKGSD-IERIPESIIGLTRLHWLIVESCIKLKSILGLPSSLQGLDANDCVSL 815

Query: 837 KSAAICFE-------FTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSE 889
           K     F        F NCLKL+ +A   I+  S+             GY          
Sbjct: 816 KRVRFSFHNPIHILNFNNCLKLDEEAKRGIIQRSV------------SGY---------- 853

Query: 890 LRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
                I LPG  IP+ F+++++G SI I L P
Sbjct: 854 -----ICLPGKNIPEEFTHKATGRSITIPLAP 880


>gi|357469145|ref|XP_003604857.1| NBS-LRR resistance protein [Medicago truncatula]
 gi|355505912|gb|AES87054.1| NBS-LRR resistance protein [Medicago truncatula]
          Length = 1684

 Score =  298 bits (764), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 221/656 (33%), Positives = 348/656 (53%), Gaps = 87/656 (13%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            + +SD V I+GIWGMGG+GKTTLAKAI++Q   +FEG  F+ ++R   ET      LQ++
Sbjct: 706  IQNSDDVLILGIWGMGGMGKTTLAKAIYNQIGSKFEGRSFLLNIRELWETDTNQVSLQQK 765

Query: 61   MLS---TTLSEKLE--VAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
            +L     TL+ K+    +G N+    KE++ + ++L+V DDVNE+ QLK L G  D FG 
Sbjct: 766  ILDDVYKTLTFKIRDLESGKNM---LKEKLSQNRVLLVFDDVNELEQLKALCGSRDWFGP 822

Query: 116  GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
            GSRI++TTRD  +L +  G   ++Y +  ++  E+ + F   AFK+    ED   HS  V
Sbjct: 823  GSRIIITTRDMHLL-RLCGV-YQMYTIEEMDKIESLKLFSWHAFKQPSPKEDFATHSTDV 880

Query: 176  VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV- 234
            ++Y+ G PL LEVLGS L     + W  VL  L  I   ++ +    LK+SF+ L     
Sbjct: 881  IAYSGGLPLALEVLGSYLADCEITEWQYVLEKLKCIPHDQVQEK---LKVSFHGLKDFTE 937

Query: 235  KSIFLDIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSISG-NFLNMHDILQEM 290
            K IFLDIACFF G DK  V  IL+     +D+ + +L++++LV++   N L MHD+L++M
Sbjct: 938  KQIFLDIACFFIGMDKKDVIQILNGCGFFADIGIKVLVERALVTVDNRNKLRMHDLLRDM 997

Query: 291  GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
            GRQI+ +E+  +P KRSRLW   E+  +L+  KGT+A++G+ L+  +     L+ +AF  
Sbjct: 998  GRQIIYEEAPSDPEKRSRLWRHGEVFDILEKRKGTEAVKGLALEFPRKDC--LETKAFKK 1055

Query: 351  MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
            M+ LRL +                       + V+L     YL   L++L+W  +     
Sbjct: 1056 MNKLRLLRL----------------------AGVKLKGDFKYLSGDLKWLYWHGFAEPCF 1093

Query: 411  PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
            P+ F+  +LV + L+ S+++Q W                        CQ L +       
Sbjct: 1094 PAEFQQGSLVSVELKYSRLKQLW----------------------NKCQMLENLK----- 1126

Query: 471  VCPVTINFSYCVNLIEFPQIS--GKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKR 527
                 +N S+ ++L E P  S    + +L L    ++  V  SI  L  L +++LRGC  
Sbjct: 1127 ----ILNLSHSLDLTETPDFSYLPNLEKLVLKNCPSLSTVSHSIGSLHKLILINLRGCTG 1182

Query: 528  LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
            L+++  S  KL+SL TLIL GC  +E   E LE+ME L  + +D+T IT++P S   +  
Sbjct: 1183 LRKLPRSIYKLKSLETLILSGCSMIEKLEEDLEQMESLITLIADKTAITKVPFSIVRMKS 1242

Query: 588  LEVLFVEDCS----KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
            +   ++  C       D  P  I S     ++  + + IS + +SV++S++  S D
Sbjct: 1243 IG--YISFCGFEGFSRDVFPSLIRS-----WMSPSNNVISLVQTSVSMSSLGTSKD 1291



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/298 (35%), Positives = 162/298 (54%), Gaps = 34/298 (11%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE 68
           I+GIWGM GIGK+T+A+AI+DQ    FE   F+ D+    E     E    Q+L      
Sbjct: 234 IIGIWGMTGIGKSTIAQAIYDQIGLYFEHKSFLKDLGVLWE-----EQNHDQVL------ 282

Query: 69  KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQ--FGQGSRIVVTTRDK 126
                      F   +  R  +L+VLD+++++ QL  L     +  FG+GS+I++TTRD+
Sbjct: 283 -----------FKGHQHHR--VLLVLDNIDKLEQLDVLGLRRSRKWFGEGSKIIITTRDR 329

Query: 127 RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVSYTKGNPLV 185
            +L+K   +   IYRV  L+  E+ + F   AF +   P ED +  SR +V+Y++G PL 
Sbjct: 330 HLLKKHGIDH--IYRVKELDESESLKVFNLAAFSQATTPQEDFSELSRQLVAYSRGLPLA 387

Query: 186 LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF 245
           L+ LG  L  +    W  VL  L R+       + + L+ SF+ L+   K IFLDIAC F
Sbjct: 388 LKELGFFLNGEEALKWKNVLKSLKRLSIPAPR-LQEALEKSFSDLSDEEKRIFLDIACLF 446

Query: 246 EGEDKDFVASILDDS-ESDVLDI--LIDKSLVSIS-GNFLNMHDILQEMGRQIVRQES 299
            G + + V  IL+ S +S  L+I  L DKS ++I   N L +H +LQ M R I++++S
Sbjct: 447 VGMNLNDVKQILNRSTQSAALEISNLEDKSFLTIDENNKLGIHVLLQAMARDIIKRKS 504


>gi|227438113|gb|ACP30546.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 799

 Score =  298 bits (763), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 198/581 (34%), Positives = 310/581 (53%), Gaps = 75/581 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSH---EFEGSCFVSDVRG---NSETAG-GLE- 55
           ++ V+I+GIWG  GIGKTT+A+A+++Q S    EF+ + F+ +V+G     E  G  L+ 
Sbjct: 203 TNEVKIIGIWGPAGIGKTTIARALYNQLSSSGDEFQLNLFMENVKGVQMRKELHGYSLKL 262

Query: 56  HLQKQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           HLQ++ LS   +++ +++   +    +ER++  K L+VLDDV+ + QL  LI   + FG 
Sbjct: 263 HLQERFLSEIFNQRTKISHLGV---AQERLKNQKALVVLDDVDGLEQLNALIDTTEWFGY 319

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           G+RI+VTT D+++L K  G  + +Y V      EAF+  C +AF +N  P+     +  V
Sbjct: 320 GTRIIVTTEDRQLL-KAHGINQ-VYEVGYPSQGEAFKILCRYAFGDNSAPKGFYDLATEV 377

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
                  PL L VLG+SL    K  W   ++ + R+  S    I  +L + ++ L  + K
Sbjct: 378 TKLAGDLPLGLSVLGASLRGLSKEEW---INAIPRLRTSLNGKIEKLLGVCYDGLDEKDK 434

Query: 236 SIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI-SGNFLNMHDILQEMG 291
           ++FL +AC F GE  D V  +L  S  D    L +L+D+SL+ I +  ++ MH +LQ+MG
Sbjct: 435 TLFLHVACLFNGEKVDRVKQLLAKSALDADFGLKVLVDRSLIHIYADGYIVMHFLLQQMG 494

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTN 350
           ++I+R +   +PG+R  L D +EIS VL    GT  + GI LD+S++   + +  +AF  
Sbjct: 495 KEIIRGQCINDPGRRQFLVDAQEISDVLVDETGTKNVLGISLDMSELDDEVYISEKAFKK 554

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M+NL+  + Y          P  +        K+QLP+GLDYLP+KLR LH D+YP++ +
Sbjct: 555 MTNLQFLRLY-------NHFPDEAV-------KLQLPHGLDYLPRKLRLLHRDSYPIKCM 600

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEK--------------------------------- 437
           PS F+P+ LVEL LR SK+ + WEG +                                 
Sbjct: 601 PSKFRPEFLVELTLRDSKLVKLWEGVQPLTSLTYMDLSSSKNIKDIPNLSGAMNLEKLYL 660

Query: 438 -------ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
                      SS+QN   L  L    C  L++ P+N++      +N   C  L  FP I
Sbjct: 661 RFCENLVTVSSSSLQNLNKLKVLDMSCCTKLKALPTNINLESLSVLNLRGCSKLKRFPCI 720

Query: 491 SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
           S +V  + LG++AIE+VPS I   + L  L++ GCK LK +
Sbjct: 721 STQVQFMSLGETAIEKVPSLIRLCSRLVSLEMAGCKNLKTL 761



 Score = 40.0 bits (92), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 41/227 (18%)

Query: 554 HFPEILEKME----------HLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLP 603
           HFP+   K++           L+ ++ D  PI  +PS F   P   V      SKL  L 
Sbjct: 566 HFPDEAVKLQLPHGLDYLPRKLRLLHRDSYPIKCMPSKFR--PEFLVELTLRDSKLVKLW 623

Query: 604 DNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGL 662
           + +  L  L Y+ L+++  I  +P+     N L  L    C+ L +   + L  L+ + +
Sbjct: 624 EGVQPLTSLTYMDLSSSKNIKDIPNLSGAMN-LEKLYLRFCENLVTVSSSSLQNLNKLKV 682

Query: 663 LHISD-YAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSL 720
           L +S    ++ +P  I  L SL +L L G +  +  P I    +Q++F+ L +   ++ +
Sbjct: 683 LDMSCCTKLKALPTNIN-LESLSVLNLRGCSKLKRFPCI---STQVQFMSLGE-TAIEKV 737

Query: 721 PEL-PLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP 766
           P L  LC +                   L SL++ GC  L++LP +P
Sbjct: 738 PSLIRLCSR-------------------LVSLEMAGCKNLKTLPPVP 765


>gi|255553307|ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223543328|gb|EEF44860.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1186

 Score =  298 bits (763), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 260/794 (32%), Positives = 397/794 (50%), Gaps = 117/794 (14%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           D SD V+I  I+G+GGIGKTT+AK +++Q    F+G  F+++V+  SE   GL  LQ+Q+
Sbjct: 211 DGSDDVEIATIYGIGGIGKTTIAKIVYNQNFRSFDGRSFLANVKEISEQPNGLARLQRQL 270

Query: 62  LSTTL---SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           LS  L   + K+      I    K+ + + ++L++LDDV+++ Q   ++   +    GS+
Sbjct: 271 LSDLLKKNTSKIYNVDEGIMKI-KDALFQKRVLLILDDVDDLEQFNAIVAMREWCHPGSK 329

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I++TTR +  L+   G  ++ + V  L  +E+ + FC  AF+++H  +    HS+ VV +
Sbjct: 330 IIITTRHEH-LQGVDGICRR-FEVEKLNDKESLQLFCWHAFRQDHPADGYEKHSKDVVHH 387

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP-RVKSI 237
             G PL L+VLGSSL  K  S W   L  L ++ +S+I  I   L+ISF+ L     K +
Sbjct: 388 CGGLPLALQVLGSSLSGKTVSVWESALEKLEKVADSKIQHI---LRISFDSLQDDHDKRL 444

Query: 238 FLDIACFFEGEDKDFVASILDDSE-SDVLDI--LIDKSLVSISGNF-LNMHDILQEMGRQ 293
           FLDIACFF G D  +V  ILD      V+ I  LID+ L++IS  + L MH +L +MGR+
Sbjct: 445 FLDIACFFTGMDIGYVFRILDGCGFYAVIGIQNLIDRCLITISDKYKLMMHQLLGDMGRE 504

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFL-----------------DLS 336
           IVRQES  +PGKRSRLWDPK+ ++VL+ N GT++I+G+ L                 D +
Sbjct: 505 IVRQESPDDPGKRSRLWDPKDATKVLRQNTGTESIKGLILKLPTQTENKRTRKDATADHT 564

Query: 337 KIKGIN------LDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGL 390
           K  G        LD ++++   N      +  K +E      M   + L+ + V+L  G 
Sbjct: 565 KENGEEDLSDDLLDQKSYSKKPNTSPTNSFSTKAFE-----KMVRLKLLNLNYVELSEGY 619

Query: 391 DYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYL 450
              PK L +L W  + L  LP++     LV L++R S ++  W+G            ++L
Sbjct: 620 KKFPKGLVWLCWRGFSLNALPTDLCLDKLVALDMRNSNLKYLWKG-----------IRFL 668

Query: 451 SALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT--RLYLGQ-SAIEEV 507
             L                      +N S+   L+  P  +G  T  +L L     + +V
Sbjct: 669 VELK--------------------VLNLSHSHGLVRTPNFTGLPTLEKLVLKDCKDLVDV 708

Query: 508 PSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKR 567
             SI  L  L + +L+ CK LK++      L SL  LIL GCLNL   P+ LE ++ L+ 
Sbjct: 709 DKSIGGLDKLIIFNLKDCKNLKKLPVEITMLHSLEELILSGCLNLVELPKDLENLQSLRV 768

Query: 568 IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPS 627
           ++ D  P+ ++ S  E+   L +                 SL++L       ++ S L  
Sbjct: 769 LHLDGIPMNQVNSITEDFKELSL-----------------SLQHL-------TSRSWLLQ 804

Query: 628 SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
             A S             L S PR FL+ LS +    +SD     IP +++ L SLE L 
Sbjct: 805 RWAKSRF----------SLSSLPR-FLVSLS-LADCCLSDNV---IPGDLSCLPSLEYLN 849

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC 747
           LSGN F  LP  I  +  L  + L+    L+S+PELP  L  L   DC  L+ +  LP  
Sbjct: 850 LSGNPFRFLPESINSLGMLHSLVLDRCISLKSIPELPTDLNSLKAEDCTSLERITNLPNL 909

Query: 748 LESLDLT--GCNML 759
           L+SL+L   GC+ L
Sbjct: 910 LKSLNLEIFGCDSL 923



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 203/469 (43%), Gaps = 91/469 (19%)

Query: 503  AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM 562
            ++  +P+ + CL  L  LD+R    LK +       + +  L+ L  LNL H   ++   
Sbjct: 635  SLNALPTDL-CLDKLVALDMRNSN-LKYL------WKGIRFLVELKVLNLSHSHGLV--- 683

Query: 563  EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY-YILAAASA 621
                     RTP      +F  LP LE L ++DC  L ++  +IG L+ L  + L     
Sbjct: 684  ---------RTP------NFTGLPTLEKLVLKDCKDLVDVDKSIGGLDKLIIFNLKDCKN 728

Query: 622  ISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLS 681
            + +LP  + + + L  L  S C  L   P+  L  L ++ +LH+    + ++    +   
Sbjct: 729  LKKLPVEITMLHSLEELILSGCLNLVELPKD-LENLQSLRVLHLDGIPMNQVN---SITE 784

Query: 682  SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS- 740
              + L LS  +  S   ++++ ++ RF          SL  LP  L  L L DC +  + 
Sbjct: 785  DFKELSLSLQHLTSRSWLLQRWAKSRF----------SLSSLPRFLVSLSLADCCLSDNV 834

Query: 741  ----LPVLPFCLESLDLTGCNMLRSLPELPLCLQYLN---LEDCNMLRSLPELPLCLQLL 793
                L  LP  LE L+L+G N  R LPE    L  L+   L+ C  L+S+PELP  L  L
Sbjct: 835  IPGDLSCLP-SLEYLNLSG-NPFRFLPESINSLGMLHSLVLDRCISLKSIPELPTDLNSL 892

Query: 794  TVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNG 853
               +C  L+ +  +   L+ L+  +               +SL      F+    L+  G
Sbjct: 893  KAEDCTSLERITNLPNLLKSLNLEIF------------GCDSLVEVQGLFK----LEPVG 936

Query: 854  KANNKILADSLLRIRHMAIASLRLGYEMAINEKL--SELRGSL----------IVLPGSE 901
              N +IL    L    + + SL+ G E+ +   L  +E+R S+          I LPG+ 
Sbjct: 937  NINTQILKSVGL----INLESLK-GVEVEMFNALACTEMRTSIQVLQECGIFSIFLPGNT 991

Query: 902  IPDWFSNQSSGSSICIQL---PPHSSCRNLIGFAFCAVLDSKKVDSDCF 947
            IP+WF+ +S  SSI  ++   P H     + G + C +    K++   +
Sbjct: 992  IPEWFNQRSESSSISFEVEAKPGH----KIKGLSLCTLYTYDKLEGGGY 1036


>gi|39104560|dbj|BAC41800.2| putative disease resistance protein [Arabidopsis thaliana]
          Length = 977

 Score =  298 bits (763), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 217/654 (33%), Positives = 329/654 (50%), Gaps = 106/654 (16%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           SD V+++GIWG  GIGKTT+A+A+F+Q S  F  SCF+  +  N   +     LQ ++LS
Sbjct: 76  SDDVKMIGIWGPAGIGKTTIARALFNQLSTGFRLSCFMGTIDVNDYDSKLC--LQNKLLS 133

Query: 64  TTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             L++K       I H    +E +   ++LIVLDDV+++ QL+ L  E   FG GSRI+V
Sbjct: 134 KILNQK----DMKIHHLGAIEEWLHNQRVLIVLDDVDDLEQLEVLAKESSWFGHGSRIIV 189

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           +  D+++L+     +  IY V+    EEA E  C  AFK+N   +     ++ VV     
Sbjct: 190 SLNDRKILKAHGIND--IYDVDFPSEEEALEILCLSAFKQNSPQDGFEEVAKRVVELCGK 247

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L V+GSS   + +  W   L+ +    + +I ++   L++ ++KL+ R +S+FL I
Sbjct: 248 LPLGLRVVGSSFYGESEDEWRIQLYGIETNLDRKIENV---LRVGYDKLSERHQSLFLHI 304

Query: 242 ACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
           ACFF  +  D+V ++L DS  DV   L  L  KSLVS +G ++ MH +LQ++GRQ+V Q+
Sbjct: 305 ACFFNHKSVDYVTTMLADSTLDVENGLKTLAAKSLVSTNG-WITMHCLLQQLGRQVVVQQ 363

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
            +  PGKR  L + KEI  VL + KGT+++ GI  D+SKI+ +++  RAF  M NL+   
Sbjct: 364 GD--PGKRQFLVEAKEIRDVLANEKGTESVIGISFDISKIETLSISKRAFNRMRNLKFLN 421

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
           FY                       V L   ++YLP +LR L+W +YP ++LP  FKP+ 
Sbjct: 422 FY--------------------NGSVSLLEDMEYLP-RLRLLYWGSYPRKSLPLTFKPEC 460

Query: 419 LVELNLRCSKVEQPWEG------------------------EKAC--------------- 439
           LVEL +  SK+E+ W G                         KA                
Sbjct: 461 LVELYMGFSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPNLSKATNLKTLTLTGCESLVE 520

Query: 440 VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
           +PSSI N + L  L   GC  L+  P+N++      +N S C  L  FP IS  + RLY+
Sbjct: 521 IPSSIWNLQKLEMLYASGCIKLQVIPTNINLASLEEVNMSNCSRLRSFPDISSNIKRLYV 580

Query: 500 GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
             + I+E P+S                    I   +C+L      + +G  +L+    + 
Sbjct: 581 AGTMIKEFPAS--------------------IVGHWCRL----DFLQIGSRSLKRLTHVP 616

Query: 560 EKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
           E + HL    SD   I  +P     LP L  L VE+C+KL ++  +  SL  L+
Sbjct: 617 ESVTHLDLRNSD---IKMIPDCVIGLPHLVSLLVENCTKLVSIQGHSPSLVTLF 667



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 156/376 (41%), Gaps = 77/376 (20%)

Query: 558 ILEKMEHLKRI---YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
           +LE ME+L R+   Y    P   LP +F+  P   V      SKL+ L   I  L  L  
Sbjct: 429 LLEDMEYLPRLRLLYWGSYPRKSLPLTFK--PECLVELYMGFSKLEKLWGGIQPLTNLKK 486

Query: 615 I-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
           I L  +S + ++P+    +N L++L  + C+ L                         EI
Sbjct: 487 INLGYSSNLKEIPNLSKATN-LKTLTLTGCESL------------------------VEI 521

Query: 674 PQEIAYLSSLEILYLSGN-NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
           P  I  L  LE+LY SG    + +P  I  ++ L  +++ + + L+S P++   +K L+ 
Sbjct: 522 PSSIWNLQKLEMLYASGCIKLQVIPTNI-NLASLEEVNMSNCSRLRSFPDISSNIKRLY- 579

Query: 733 IDCKMLQSLP---VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPE---- 785
           +   M++  P   V  +C       G   L+ L  +P  + +L+L + + ++ +P+    
Sbjct: 580 VAGTMIKEFPASIVGHWCRLDFLQIGSRSLKRLTHVPESVTHLDLRNSD-IKMIPDCVIG 638

Query: 786 LPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEF 845
           LP  + LL V NC +L S+       Q    S++   + H   L+    S         F
Sbjct: 639 LPHLVSLL-VENCTKLVSI-------QGHSPSLVTLFADHCISLKSVCCSFHGPISKLMF 690

Query: 846 TNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDW 905
            NCLKL+ ++   I+  S                               I LPG EIP  
Sbjct: 691 YNCLKLDKESKRGIIQQS---------------------------GNKSICLPGKEIPAE 723

Query: 906 FSNQSSGSSICIQLPP 921
           F++Q+ G+ I I L P
Sbjct: 724 FTHQTIGNLITISLAP 739


>gi|6692110|gb|AAF24575.1|AC007764_17 F22C12.17 [Arabidopsis thaliana]
          Length = 1195

 Score =  298 bits (763), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 214/655 (32%), Positives = 335/655 (51%), Gaps = 95/655 (14%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETA---GGLE-HLQK 59
            +D V++V I G  GIGK+T+ +A+    S+ F  +CFV ++RG+        GL+  LQ+
Sbjct: 403  NDEVKMVAISGPAGIGKSTIGRALHSLLSNRFHHTCFVDNLRGSHPIGLDEYGLKLRLQE 462

Query: 60   QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            Q+LS  L++     G  I H    KER+  MK+ I+LDDVN+V QL+ L  E + FG GS
Sbjct: 463  QLLSKILNQD----GSRICHLGAIKERLCDMKVFIILDDVNDVKQLEALANESNWFGPGS 518

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI+VTT +K +L++        Y V     EEA +  C +AF+++         +RSV  
Sbjct: 519  RIIVTTENKELLKQH--GINNTYYVGFPSDEEAIKILCRYAFRQSSSRHGFKKLTRSVTE 576

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                 PL L V+GSSL  K +  W  V+  L  I +    DI  +L++ +  L    +S+
Sbjct: 577  LCGKLPLGLRVVGSSLHGKNEEEWEYVIRRLETIID---RDIEQVLRVGYESLHENEQSL 633

Query: 238  FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF-LNMHDILQEMGRQ 293
            FL IA FF  ED D V ++L +++ D+   L+IL++KSL+ IS +  + MH +LQ +GRQ
Sbjct: 634  FLHIAIFFNYEDGDLVKAMLAENDLDIEHELNILVNKSLIYISTDGRIRMHKLLQLVGRQ 693

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
              ++E   EP KR  L D +EI  VL+++ GT A+ GI  D S I  +++  +A   M N
Sbjct: 694  ANQRE---EPWKRRILIDAQEICHVLENDIGTGAVSGILFDTSGINEVSISNKALRRMCN 750

Query: 354  LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
            LR    Y  K                 Y+++ +P  +++ P +LR LHWD YP + LP  
Sbjct: 751  LRFLSVYKTK--------------HDGYNRMDIPEDMEF-PPRLRLLHWDAYPSKCLPLK 795

Query: 414  FKPKNLVELNLRCSKVEQPWEGEK------------------------------------ 437
            F+ +NLVEL+++ S++E  W G +                                    
Sbjct: 796  FRAENLVELDMKDSRLEYLWPGTQLLTKLKKLNLEGSYNLKELPDLSNATNLEMLDLSVC 855

Query: 438  ---ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
               A +PSSI+N   L  +    C+SL   P+N++     T+  + C  L  FP  S K+
Sbjct: 856  LALAELPSSIKNLHKLDVIYMDLCESLHMIPTNINLASLETMYMTGCPQLKTFPAFSTKI 915

Query: 495  TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSL------VTLILLG 548
             RLYL ++ +EEVP+SI   + L  +DL G + LK I+     L++L      + +I   
Sbjct: 916  KRLYLVRTGVEEVPASITHCSRLLKIDLSGSRNLKSITHLPSSLQTLDLSSTDIEMIADS 975

Query: 549  CLNLEHFPEILEKMEHLKRIYSDR-TPITELPSSFENLPGLEVLFVEDCSKLDNL 602
            C+      + L++++HL+     +   + ELP+S      L +L  EDC  L+ +
Sbjct: 976  CI------KDLQRLDHLRLCRCRKLKSLPELPAS------LRLLTAEDCESLERV 1018



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 178/449 (39%), Gaps = 120/449 (26%)

Query: 528  LKRISTSFCKLRSLVTLILLGCLNLEH-------FPEILEKMEHLKRIYSDRTPITELPS 580
            +  +S S   LR +  L  L     +H        PE +E    L+ ++ D  P   LP 
Sbjct: 735  INEVSISNKALRRMCNLRFLSVYKTKHDGYNRMDIPEDMEFPPRLRLLHWDAYPSKCLPL 794

Query: 581  SF--ENL--------------PGLEVLFV------EDCSKLDNLPD--NIGSLEYLYYIL 616
             F  ENL              PG ++L        E    L  LPD  N  +LE L   L
Sbjct: 795  KFRAENLVELDMKDSRLEYLWPGTQLLTKLKKLNLEGSYNLKELPDLSNATNLEMLD--L 852

Query: 617  AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY-AVREIPQ 675
            +   A+++LPSS+   + L  +    C+ L   P    + L+++  ++++    ++  P 
Sbjct: 853  SVCLALAELPSSIKNLHKLDVIYMDLCESLHMIPTN--INLASLETMYMTGCPQLKTFP- 909

Query: 676  EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL--I 733
              A+ + ++ LYL     E +PA I   S+L  I L     L+S+  LP  L+ L L   
Sbjct: 910  --AFSTKIKRLYLVRTGVEEVPASITHCSRLLKIDLSGSRNLKSITHLPSSLQTLDLSST 967

Query: 734  DCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLL 793
            D +M+        C++ L        + L  L LC        C  L+SLPELP  L+LL
Sbjct: 968  DIEMIAD-----SCIKDL--------QRLDHLRLC-------RCRKLKSLPELPASLRLL 1007

Query: 794  TVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNG 853
            T  +C  L+ +   L                ++P  Q              FTNCLKL  
Sbjct: 1008 TAEDCESLERVTYPL----------------NTPTGQ------------LNFTNCLKLGE 1039

Query: 854  KANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGS 913
            +A   I+  SL  ++H                            PGS +P  F++++ G+
Sbjct: 1040 EAQRVIIQQSL--VKHAC-------------------------FPGSVMPSEFNHRARGN 1072

Query: 914  SICIQLPPHSSCRNLIGFAFCAVLDSKKV 942
            S+ I +   +S      F  C ++  +++
Sbjct: 1073 SLKILVKSSAS----FAFKACVLISPRQL 1097


>gi|9965103|gb|AAG09951.1| resistance protein LM6 [Glycine max]
          Length = 863

 Score =  298 bits (763), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 251/759 (33%), Positives = 370/759 (48%), Gaps = 102/759 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V I+GI GMGG+GKTTLA A+ +  +  F+ SCF+ +VR  S    GL+HLQ  
Sbjct: 187 VGSHDVVHIIGIHGMGGLGKTTLALAVHNFIALHFDESCFLQNVREES-NKHGLKHLQSI 245

Query: 61  MLSTTLSEK--LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS  L EK     +        + R++R K+L++LDDV++  QLK ++G  D FG GSR
Sbjct: 246 LLSKLLGEKDITLTSWQEGASMIQHRLQRKKVLLILDDVDKRQQLKAIVGRPDWFGPGSR 305

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRDK +L+    E ++ Y V  L    A +     AFK              VV+Y
Sbjct: 306 VIITTRDKHLLKYH--EVERTYEVKVLNQSAALQLLTWNAFKREKIDPSYEDVLNRVVTY 363

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+GS+L  K  + W   +    RI   EI    +ILK+SF+ L    K++F
Sbjct: 364 ASGLPLALEVIGSNLFEKTVAEWESAMEHYKRIPSDEIQ---EILKVSFDALGEEQKNVF 420

Query: 239 LDIACFFEGEDKDFVASILDDSESDV----LDILIDKSLVSIS-GNFLNMHDILQEMGRQ 293
           LDIAC F+G +   V +IL D   +     + +L++KSLV +S  + + MHD++Q+MGR+
Sbjct: 421 LDIACCFKGYEWTEVDNILRDLYGNCTKHHIGVLVEKSLVKVSCCDTVEMHDMIQDMGRE 480

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS---KIKGINLDPRAFTN 350
           I RQ S +EPGK  RL  PK+I +V K       IE I LD S   K + +  +  AF  
Sbjct: 481 IERQRSPEEPGKCKRLLLPKDIIQVFK-------IEIICLDFSISDKEETVEWNENAFMK 533

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M NL++      KF                        G +Y P+ LR L W  YP   L
Sbjct: 534 MKNLKILIIRNCKF----------------------SKGPNYFPEGLRVLEWHRYPSNCL 571

Query: 411 PSNFKPKNLVELNLRCSKVEQ-PWEG-EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
           PSNF P NLV   L  S +    + G  KA + SS+Q   +L+ L+F  C+ L   P   
Sbjct: 572 PSNFDPINLVICKLPDSSITSFEFHGSSKASLKSSLQKLGHLTVLNFDRCEFLTKIPDVS 631

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
                  ++F++C +L+                     V  SI  L  L+ L   GC++L
Sbjct: 632 DLPNLKELSFNWCESLV--------------------AVDDSIGFLNKLKTLSAYGCRKL 671

Query: 529 KRISTSF--CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLP 586
               TSF    L SL TL L GC +LE+FPEIL +M+++  +     PI ELP SF+NL 
Sbjct: 672 ----TSFPPLNLTSLETLNLGGCSSLEYFPEILGEMKNITVLALHDLPIKELPFSFQNLI 727

Query: 587 GLEVLFVEDCSKLDNLPDNIGSLEYL--YYILAAASAISQLPSSVALSNMLRSL---DSS 641
           GL  L+++ C  +  L  ++ ++  L  + I  + +    + S      ++ S+   +++
Sbjct: 728 GLLFLWLDSCG-IVQLRCSLATMPKLCEFCITDSCNRWQWVESEEGEEKVVGSILSFEAT 786

Query: 642 HCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIK 701
            C   + F   F +G                    + YL+      L GNNF  LP   K
Sbjct: 787 DCNLCDDF---FFIGSKRFA--------------HVGYLN------LPGNNFTILPEFFK 823

Query: 702 QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           ++  L  + + D   LQ +  LP  LK+    +C  L S
Sbjct: 824 ELQFLTTLVVHDCKHLQEIRGLPPNLKHFDARNCASLTS 862


>gi|449482303|ref|XP_004156242.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1633

 Score =  298 bits (763), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 247/780 (31%), Positives = 384/780 (49%), Gaps = 107/780 (13%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V+ V I GMGGIGKTT+A+ +FD    +FE  CF++   G+S+ +  L  LQ++MLS 
Sbjct: 219 DDVRFVAIVGMGGIGKTTIAQVVFDCILSKFEDCCFLTLPGGDSKQS--LVSLQREMLSQ 276

Query: 65  TL-SEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
               E   +   N      K R+   K+LIVLD + E  QL+ L G ++ FG GSRI++T
Sbjct: 277 IFHKEDFRIWHENHGVEMIKNRLSGRKVLIVLDGIEERRQLEMLAGSIEWFGPGSRIIIT 336

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH-SRSVVSYTKG 181
           TR+K +L     +E K+Y V  L+ + A + F   AF  NH   D     S  +V   K 
Sbjct: 337 TRNKGLLCHPNYDEMKVYNVEELDHDSALQLFLKHAFGSNHQNNDSFMDLSNEIVEKAKR 396

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L V+GSSL  K  + W + L  L ++ E    + +D+LKIS++ L    + +FLDI
Sbjct: 397 LPLALRVIGSSLYGKDITVWRETLKRLIKVDE---RNFFDVLKISYDGLGVESQQVFLDI 453

Query: 242 ACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
            CFF G+++D V  IL+    S +  + +L+ + L+ +S   + +HD++ EMGR+IVR+E
Sbjct: 454 TCFFNGKNEDRVIEILESFGYSPNSEVQLLMQRCLIEVSHKKILVHDLILEMGREIVRKE 513

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK--IKGINLDPRAFTNMSNLRL 356
           S  +  K+SR+W  +++            I+GI L L+K   + I LD  +F+ M+ LR+
Sbjct: 514 SLTQAEKQSRIWLHEDLYCRFAEKHDLMHIQGIVLSLAKEMEESIELDAESFSEMTKLRI 573

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
                                 L  S V+L   ++YL   LR ++W  YP ++LP  F+ 
Sbjct: 574 ----------------------LEISNVELDEDIEYLSPLLRIINWLGYPSKSLPPTFQS 611

Query: 417 KNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI 476
           + L EL L  S + + W+G+K         F  L  +     + LR           VT 
Sbjct: 612 RYLFELLLPHSHLLRIWDGKK--------RFPKLKLIDVSNSEHLR-----------VTP 652

Query: 477 NFSYCVNLIEFPQISGKVTRLYLGQSA-IEEVPSSIECLTDLEVLDLRGCKRLKRISTSF 535
           +FS   NL           RL L     + E+  SI  L  L +LDL GC  LK    + 
Sbjct: 653 DFSGVPNL----------ERLVLCNCVRLCEIHPSINSLNKLILLDLEGCGDLKHFPANI 702

Query: 536 CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
            + ++L TL L G   LE FPEI   MEHL  ++ D + IT    S   L GL  L +  
Sbjct: 703 -RCKNLQTLKLSGT-GLEIFPEI-GHMEHLTHLHLDGSNITHFHPSIGYLTGLVFLDLSS 759

Query: 596 ------------------------CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVAL 631
                                   C KLD +P ++ + E L  +  + ++I+ +P S+  
Sbjct: 760 CLGLSSLPCEIGNLKSLKTLLLKYCKKLDKIPPSLANAESLETLSISETSITHVPPSII- 818

Query: 632 SNMLRSLDSSHCKGLE-----------SFPRTFLLGLSAMGLLHISDYAV--REIPQEIA 678
            + L++L +  C+GL            +  +T   GL  +  L++    +   +IP+++ 
Sbjct: 819 -HCLKNLKTLDCEGLSHGIWKSLLPQFNINQTITTGLGCLKALNLMGCKLMDEDIPEDLH 877

Query: 679 YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
             SSLE L LS NNF +LP  +  + +L+ ++L     L+ LP+LP  L+Y+  IDC+ +
Sbjct: 878 CFSSLETLDLSYNNFTTLPDSLSHLKKLKTLNLNCCTELKDLPKLPESLQYVGGIDCRSM 937


>gi|297811953|ref|XP_002873860.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319697|gb|EFH50119.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1168

 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 225/762 (29%), Positives = 370/762 (48%), Gaps = 96/762 (12%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           DT +I+G+ GM GIGKTTL K ++++  +EF     + D+   S   G L +L   +L  
Sbjct: 219 DTTRIIGVVGMPGIGKTTLVKKLYEKLKNEFLSHVLILDIHETSREQG-LSYLPTILLED 277

Query: 65  TLS------EKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            L       E ++ A        K+++ + K L++LD V+   Q+  ++G+ D   QGS+
Sbjct: 278 LLKVKNPMFETVQAAHEGY----KDQLLKTKSLVILDHVSNKEQIAAILGKCDWIKQGSK 333

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           IV+ T D  ++     +   IY+V  L ++++ + F ++A  +    +     S   V Y
Sbjct: 334 IVIATGDTSLIHDLVDD---IYQVPQLSYKDSLQQFTHYAIGDQSNAQSFLKLSIDFVHY 390

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNR------------ICESEIHDIYDILKIS 226
           TKGNPL L+VLG+ L  K +S W   L  L++              +S    +  + K  
Sbjct: 391 TKGNPLALKVLGAELLGKDESLWNSKLDSLSQHHKGRARSSRKIRAQSSSEMLQSVWKEC 450

Query: 227 FNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV------LDILIDKSLVSISGNF 280
           ++ L+ + +   LDIACF    DK++VAS+LD  +++       ++ L++K L++IS   
Sbjct: 451 YDGLSQQQQDTLLDIACF-RSLDKNYVASLLDSHDANSTEARIEIEKLMNKFLITISAGK 509

Query: 281 LNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG 340
           + MHD L    +++ R+ +  +   R RLWD   I  VL++NKG  ++  IFLDL+ +  
Sbjct: 510 IEMHDTLHMFCKEVGREATAPDGKGRRRLWDYHTIIDVLENNKGV-SVRSIFLDLADLNM 568

Query: 341 IN-LDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRY 399
            N L  +AF  MSN+R  K Y           +   +E      ++ P+GL+    +LR 
Sbjct: 569 NNSLHSQAFNLMSNIRFLKIY----------NTCCPQECDRDIMLKFPDGLELPFDELRC 618

Query: 400 LHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK---------------------- 437
           LHW  +PL+ LP +F PKNLV+L L  S++E+ WEG K                      
Sbjct: 619 LHWLKFPLKELPPDFDPKNLVDLKLHYSEIERVWEGNKDASKLKWIDFNHSRKLYTLSGL 678

Query: 438 -----------------ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
                            A +P  ++N K L  L+ +GC SL+  P  ++ +   T+  S 
Sbjct: 679 AEARNLQELNLEGCIALATLPQDMENMKCLVFLNLRGCTSLKYLPE-INLISLETLILSD 737

Query: 481 CVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS 540
           C     F  IS K+  +YL  +AI+E+PS I  L  L +L+++GCK+LK +  S  +L++
Sbjct: 738 CSKFKVFKVISEKLEAIYLDGTAIKELPSDIRNLQRLVLLNMKGCKKLKTLPDSLGELKA 797

Query: 541 LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
           L  LIL GC  L+ FPE+ + M  L+ +  D T I E+P+ F     L  L +    K+ 
Sbjct: 798 LQELILSGCSKLQSFPEVAKNMNRLEILLLDETAIKEMPNIF----SLRYLCLSRNEKIC 853

Query: 601 NLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSA 659
            LP+NI     L ++ +    +++ LP    L   L+ LD+  C  L+S  +        
Sbjct: 854 RLPENISQFSRLKWLDMKYCKSLTYLPK---LPPNLQCLDAHGCSSLKSIVQPL---AHV 907

Query: 660 MGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIK 701
           M   HI    +     ++   +  EI   S    + LP+ +K
Sbjct: 908 MATEHIHSTFIFTKCDKLEQAAKEEISSYSQRKCQILPSALK 949



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 218/516 (42%), Gaps = 97/516 (18%)

Query: 497  LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
            L L  S IE V    +  + L+ +D    ++L  +S    + R+L  L L GC+ L   P
Sbjct: 641  LKLHYSEIERVWEGNKDASKLKWIDFNHSRKLYTLS-GLAEARNLQELNLEGCIALATLP 699

Query: 557  EILEKMEHLKRIYSDRTPITELPSSFE-NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
            + +E M+ L  ++ +    T L    E NL  LE L + DCSK          LE +Y  
Sbjct: 700  QDMENMKCL--VFLNLRGCTSLKYLPEINLISLETLILSDCSKFKVFKVISEKLEAIYL- 756

Query: 616  LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
                +AI +LPS +     L  L+   CK L++                        +P 
Sbjct: 757  --DGTAIKELPSDIRNLQRLVLLNMKGCKKLKT------------------------LPD 790

Query: 676  EIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID 734
             +  L +L+ L LSG +  +S P + K M++L  + L D   ++ +P +   L+YL    
Sbjct: 791  SLGELKALQELILSGCSKLQSFPEVAKNMNRLEILLL-DETAIKEMPNI-FSLRYL---- 844

Query: 735  CKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLT 794
                        CL S +   C +  ++ +    L++L+++ C  L  LP+LP  LQ L 
Sbjct: 845  ------------CL-SRNEKICRLPENISQFSR-LKWLDMKYCKSLTYLPKLPPNLQCLD 890

Query: 795  VRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGK 854
               C+ L+S+ + L       A V+     HS                F FT C KL   
Sbjct: 891  AHGCSSLKSIVQPL-------AHVMATEHIHS---------------TFIFTKCDKLEQA 928

Query: 855  ANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSS 914
            A  +I + S  + + +  ++L+L  +  + E L          PG EIP WF +Q+ GS 
Sbjct: 929  AKEEISSYSQRKCQILP-SALKLCNKDLVPEILFS-----TCFPGGEIPPWFYHQAIGSK 982

Query: 915  ICIQLPPHSSCRNLIGFAFCAVLD---------SKKVDSDCFRY-FYVSFQFDLEIKTLS 964
            +  + P H     L G AFCAV+          +++  ++C    F  +   D E  T +
Sbjct: 983  VKFESPQHWKYNKLSGIAFCAVVSFQNCQDQTRTEREHTNCLSVKFTCTSTTDAEPCTET 1042

Query: 965  ETK---HVDLGYNSRYIEDLIDSDRVILGFKPCLNV 997
              K     + G N    +D  +SD V +GF  CL++
Sbjct: 1043 TWKVGSWTEQGNN----KDTTESDHVFIGFTTCLHL 1074


>gi|357513731|ref|XP_003627154.1| Nbs-lrr resistance protein [Medicago truncatula]
 gi|355521176|gb|AET01630.1| Nbs-lrr resistance protein [Medicago truncatula]
          Length = 1544

 Score =  298 bits (762), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 249/749 (33%), Positives = 371/749 (49%), Gaps = 88/749 (11%)

Query: 6   TVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTT 65
           T+  +GIWGM GIGKTT+AK +F +    ++  CF+  V  +SE  G + +++ Q+L   
Sbjct: 202 TIPRIGIWGMSGIGKTTIAKQMFAKNFAHYDNVCFLEKVSEDSEKLGPI-YVRNQLLREL 260

Query: 66  LSEKLEVAGPNIPH-FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
           L  ++  +  +  H F K R+ R K+ IVLDDV+   QL  L   L   G  SR+++TTR
Sbjct: 261 LKREITASDVHGLHTFIKRRLFRKKVFIVLDDVDNASQLDDLCRVLGDLGPNSRLIITTR 320

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           D+  L    G+  +IY V     +++ + F   AFK++H  +     S   V    G PL
Sbjct: 321 DRHTLS---GKVDEIYEVKTWRLKDSLKLFSLRAFKQDHPLKGYECFSERAVECAGGVPL 377

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            LEVLGS    ++   W   L+      ES + DI  +LK S+N L+ R K +FLDIA F
Sbjct: 378 ALEVLGSHFHSRKPEFWESELNLYENKGES-LPDIQKVLKASYNGLSWRQKEMFLDIAFF 436

Query: 245 FEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQESE 300
           F+GE+KD V  ILD    + +  ++IL DK+L++IS N  + MHD+LQ++   IVR+E  
Sbjct: 437 FKGENKDIVTRILDAFGFNATSGIEILEDKTLITISNNSRIQMHDLLQKLAFDIVREEY- 495

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
            + GKRSRL D K+I  VL +NKG DAIEGI  DLS+   IN+    F  M+ LR  KF+
Sbjct: 496 NDRGKRSRLRDAKDICDVLGNNKGNDAIEGIIFDLSQKLDINVQADTFKLMTKLRFLKFH 555

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
           +PK  +  KL +           V LP  +     KL YL W+ YPL++LP  F  + L+
Sbjct: 556 IPKGKK--KLGT-----------VHLPENIMPFFDKLTYLEWNGYPLKSLPEPFHAEQLI 602

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
           +++L  S +E  W G        +Q    L A+    C+ LR                  
Sbjct: 603 QISLPHSNIEHLWYG--------MQELVNLEAIDLSECKQLR------------------ 636

Query: 481 CVNLIEFPQISGKVTRLYLGQSAIEEV----PSSIECLTDLEVLDLRGCKRLKRISTSFC 536
                  P +SG +    L  S  EE+    PS+    T L+ L L  C +L+ +     
Sbjct: 637 -----HLPDLSGALKLKQLRLSGCEELCEVRPSAFSKDT-LDTLLLDRCTKLESLMGE-K 689

Query: 537 KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
            L SL    + GC +L+ F       + + R+   +T I  L  S  ++  L  L +ED 
Sbjct: 690 HLTSLKYFSVKGCKSLKEFSL---SSDSINRLDLSKTGIKILHPSIGDMNNLIWLNLEDL 746

Query: 597 SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
           + L NLP  +  L  L  +  +         +V   + L +L                 G
Sbjct: 747 N-LTNLPIELSHLRSLTELRVSKC-------NVVTKSKLEAL---------------FEG 783

Query: 657 LSAMGLLHISDYA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN 715
           L+ + LLH+ D   + E+P  I+ L SL  L L G++ E LPA IK +S+L    L++ +
Sbjct: 784 LTLLRLLHLKDCCNLIELPANISSLESLHELRLDGSSVEELPASIKYLSELEIQSLDNCS 843

Query: 716 MLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
            L+ LPELPL +K     +C  L ++  L
Sbjct: 844 KLRCLPELPLSIKEFQADNCTSLITVSTL 872



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 128/529 (24%), Positives = 213/529 (40%), Gaps = 85/529 (16%)

Query: 552  LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
            L+  PE     E L +I    + I  L    + L  LE + + +C +L +LPD  G+L+ 
Sbjct: 589  LKSLPEPFH-AEQLIQISLPHSNIEHLWYGMQELVNLEAIDLSECKQLRHLPDLSGALKL 647

Query: 612  LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP-------------------RT 652
                L+    + ++  S    + L +L    C  LES                     + 
Sbjct: 648  KQLRLSGCEELCEVRPSAFSKDTLDTLLLDRCTKLESLMGEKHLTSLKYFSVKGCKSLKE 707

Query: 653  FLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE 712
            F L   ++  L +S   ++ +   I  +++L  L L   N  +LP  +  +  L  + + 
Sbjct: 708  FSLSSDSINRLDLSKTGIKILHPSIGDMNNLIWLNLEDLNLTNLPIELSHLRSLTELRVS 767

Query: 713  DFNM-----LQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLD---LTGCNMLRSLPE 764
              N+     L++L E    L+ LHL DC  L  LP     LESL    L G     S+ E
Sbjct: 768  KCNVVTKSKLEALFEGLTLLRLLHLKDCCNLIELPANISSLESLHELRLDGS----SVEE 823

Query: 765  LPLCLQYLN------LEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASV 818
            LP  ++YL+      L++C+ LR LPELPL ++     NC  L            +  S 
Sbjct: 824  LPASIKYLSELEIQSLDNCSKLRCLPELPLSIKEFQADNCTSL------------ITVST 871

Query: 819  LEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLG 878
            L+  S +           +   I F+ +  L+L+G + ++I  D++L ++  A  ++ + 
Sbjct: 872  LKTFSINMIG--------QKKYISFKNSIMLELDGPSLDRITEDAMLTMKSAAFHNVLVR 923

Query: 879  YEMAINEKLSELRGSLIVLPGSEIPDWFSNQS-SGSSICIQLPPHSSCRNLIGFAFCAVL 937
                     +  R   + LPG  +P    +QS + SSI I +       N +GF F  V+
Sbjct: 924  KYRFQTHSFNYNRAE-VCLPGRRVPREIKHQSTTSSSITINIS------NSLGFIFAVVV 976

Query: 938  DSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDS---DRVILGFKPC 994
               K  +    YF       +  +  +E    ++GY S++    I S   D V + + P 
Sbjct: 977  SPSK-KTQQHGYF-----VGMRCQCYTEDGKREVGYKSKWDHKPITSLNMDHVFVWYDPY 1030

Query: 995  LNVGFPDGYHHTIATFKFFAER---------KFYKIKRCGLCPVYANPS 1034
                        I+ FKF                 IK CG+CP+Y + S
Sbjct: 1031 HYDSILSSIERKIS-FKFCITTYTSSGKELDGLLSIKECGVCPIYYSES 1078


>gi|297816422|ref|XP_002876094.1| hypothetical protein ARALYDRAFT_485509 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321932|gb|EFH52353.1| hypothetical protein ARALYDRAFT_485509 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1195

 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 216/676 (31%), Positives = 350/676 (51%), Gaps = 65/676 (9%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           +  +I+G+ GM GIGKTTLA+ I++    +F     + D+R  S+  G L+ L   +L  
Sbjct: 227 EETRILGVVGMPGIGKTTLAREIYESLRCKFLRHGLIQDIRRTSKELG-LDCLPALLLEE 285

Query: 65  TLSEKLEVAGPNIPHFTKER---------VRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
                    G  IP     R         +   K+L+VLDDV++  Q+  L+G  D   Q
Sbjct: 286 L-------LGVRIPDIESTRCAYESYKMELYTHKVLVVLDDVSDKEQIDVLLGRCDWIRQ 338

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKEN---HCPEDLNWHS 172
           GSRIV+ T DK +++         Y V  L  ++   HF  +AF  +   H  E +   S
Sbjct: 339 GSRIVIATSDKSLIQDV---ADYTYVVPQLNHKDGLGHFGRYAFDHHSNIHNNEVIMKLS 395

Query: 173 RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
           +  V Y +G+PLVL++LG+ L  K + HW   L  L    E+    I D+L++S+++L+ 
Sbjct: 396 KEFVHYGRGHPLVLKLLGADLNGKDEDHWKTKLATL---AENSSQSIRDVLQVSYDELSQ 452

Query: 233 RVKSIFLDIACFFEGEDKDFVASILDDSE-SDVLDILIDKSLVSISGNFLNMHDILQEMG 291
             K IFLDIAC F  ED+ ++AS+LD SE +  +  L++K ++++S + + MHD+L    
Sbjct: 453 EHKDIFLDIAC-FRSEDESYIASLLDSSEAASEIKALMNKFMINVSEDRVEMHDLLYTFA 511

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIK-GINLDPRAFTN 350
           R++ R+   ++     RLW  ++I+ VLK+ +    + GIFL+++++K  ++LD   F  
Sbjct: 512 RELCRRAYTQDRRGPHRLWHHQDITDVLKNIEEGAEVRGIFLNMNEMKREMSLDSCTFKP 571

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M  LR  K Y           S   ++    +K+ LP+GL++   ++RYLHW  +PL+ +
Sbjct: 572 MHGLRYLKIY----------SSHCPQQCKPNNKINLPDGLNFPLNEVRYLHWLQFPLKEI 621

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEK-ACVP----------------SSIQNFKYLSAL 453
           P +F P+NLV+L L  SK+E+ W  +K    P                S +   + L  L
Sbjct: 622 PPDFNPRNLVDLKLPHSKIERIWSNDKDKDTPKLKWVNLNHSSNLWDLSGLSKAQSLVFL 681

Query: 454 SFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIEC 513
           + KGC SL+S P  ++ V    +  S C NL EF  IS  +  LYL  ++I+E+P +   
Sbjct: 682 NLKGCTSLKSLPE-INLVSLEILILSNCSNLKEFRVISQNLETLYLDGTSIKELPLNFNI 740

Query: 514 LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT 573
           L  L +L+++GC +LK        L++L  LIL  C  L+ FP I E +  L+ +  D T
Sbjct: 741 LQRLVILNMKGCTKLKEFPDCLDDLKALKELILSDCSKLQKFPAIRESIMVLEILRLDAT 800

Query: 574 PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALS 632
            ITE+P     +  L+ L      ++ +LPDNI  L  L ++ L     ++ +P    L 
Sbjct: 801 TITEIPM----ISSLQCLCFSKNDQISSLPDNISQLFQLKWLDLKYCKRLTSIPK---LP 853

Query: 633 NMLRSLDSSHCKGLES 648
             L+ LD+  C  L++
Sbjct: 854 PNLQHLDAHGCCSLKT 869



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 169/383 (44%), Gaps = 28/383 (7%)

Query: 627  SSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEI 685
            S ++ +  L  L+   C  L+S P   L+ L  + L + S+    R I Q      +LE 
Sbjct: 670  SGLSKAQSLVFLNLKGCTSLKSLPEINLVSLEILILSNCSNLKEFRVISQ------NLET 723

Query: 686  LYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP---LCLKYLHLIDCKMLQSLP 742
            LYL G + + LP     + +L  ++++    L+  P+       LK L L DC  LQ  P
Sbjct: 724  LYLDGTSIKELPLNFNILQRLVILNMKGCTKLKEFPDCLDDLKALKELILSDCSKLQKFP 783

Query: 743  VLPFCLESLDLTGCNMLRSLPELPL--CLQYLNLEDCNMLRSLPE---LPLCLQLLTVRN 797
             +   +  L++   +   ++ E+P+   LQ L     + + SLP+       L+ L ++ 
Sbjct: 784  AIRESIMVLEILRLDAT-TITEIPMISSLQCLCFSKNDQISSLPDNISQLFQLKWLDLKY 842

Query: 798  CNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANN 857
            C RL S+P++   LQ LDA     L   S  L     + +  +  F F+NC KL   A  
Sbjct: 843  CKRLTSIPKLPPNLQHLDAHGCCSLKTVSNPLACLTTTQQIYST-FIFSNCNKLERSAKE 901

Query: 858  KILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICI 917
            +I + +  + +      L L  +   N   SE   S I  PGSE+P WF +++ G  + +
Sbjct: 902  EISSFAQRKCQ------LLLDAQKRCNGSDSEPLFS-ICFPGSELPSWFCHEAVGPVLEL 954

Query: 918  QLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKH---VDLGYN 974
            ++PPH     L   A CAV+   K +      F V   F LE+K  S  +    V    N
Sbjct: 955  RMPPHWHENRLASVALCAVVSFPKSEEQ-INCFSVKCTFKLEVKEGSWIEFSFPVGRWSN 1013

Query: 975  SRYIEDLIDSDRVILGFKPCLNV 997
               I + I S+   +G+  C  +
Sbjct: 1014 QDNIVETIASEHAFIGYISCSKI 1036


>gi|297850940|ref|XP_002893351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339193|gb|EFH69610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1385

 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 253/830 (30%), Positives = 392/830 (47%), Gaps = 77/830 (9%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            +SS  VQ++G++GMGGIGKTTLAKA +++    F+   F+SD+R  S    GL +LQK +
Sbjct: 205  ESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFKQRAFISDIRERSSAEDGLVNLQKSL 264

Query: 62   LST--TLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
            +     L  ++E     +    KE V   K+++VLDDV+ + Q+  L+GE   +GQG+ I
Sbjct: 265  IKELFRLVTEIEDVSRGLEKI-KENVHDKKIIVVLDDVDHIDQVNALVGETRWYGQGTLI 323

Query: 120  VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
            V+TTRD  +L K    ++  Y V  L   +A + F   + ++    ++L   S  +V  +
Sbjct: 324  VITTRDSEILSKLSVNQQ--YEVKCLTESQALQLFSYHSLRKEKPTDNLMELSTKIVRIS 381

Query: 180  KGNPLVLEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
               PL +EV GS L  K++   W      L+++ +++  ++ D+L +SF  L    K +F
Sbjct: 382  GLLPLAVEVFGSLLYDKKEEKEWQT---QLDKLKKTQPGNLQDVLALSFESLDDEEKKVF 438

Query: 239  LDIACFFEGED--KDFVASILDD---SESDVLDILIDKSLVSISGN-FLNMHDILQEMGR 292
            LDIAC F      K+ V  +L     +    L +L  KSLV I  N  L MHD +++MGR
Sbjct: 439  LDIACLFLRMQITKEEVVEVLKGCGFNAEAALSVLRQKSLVKIFANDTLWMHDQIRDMGR 498

Query: 293  QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF-TNM 351
            ++   E   +P  RSRLWD  EI  VL + KGT +I+GI  D  K      DP A    +
Sbjct: 499  KMDLTEIHGDPSIRSRLWDRAEIMTVLNNMKGTSSIQGIVFDFKKKPA--WDPSAEDIAL 556

Query: 352  SNLR-------LFKFYVPKFY---------------EIEKLPSMSTEEQLSYSKVQLPNG 389
             NL+       ++ +   KF                 +E    M     L  + V L   
Sbjct: 557  RNLQKSPGIKSVYSYLKNKFIPFREEEKPKSSEITIRVEPFVPMIKLRLLQINHVNLEGN 616

Query: 390  LDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW----EGEKACVPSSIQ 445
            L  LP +L+++ W   PL  LP +F    L  L+L  S++ +      +G  + + ++ Q
Sbjct: 617  LKLLPPELKWIQWKGCPLENLPPDFLAGQLAVLDLSESRIRRVQSLRSKGVGSLISTNGQ 676

Query: 446  NFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIE 505
              + L  ++ +GC SL + P   +      + F  C  L++                   
Sbjct: 677  VDENLKVINLRGCHSLEAIPDLSNHKALEKLVFERCNLLVK------------------- 717

Query: 506  EVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHL 565
             VP S+  L  L  LDLR C +L        +L+ L  L L GC NL   PE +  M  L
Sbjct: 718  -VPRSVGNLRKLLQLDLRRCSKLSEFLEDVSELKCLEKLFLSGCSNLSVLPENIGSMPCL 776

Query: 566  KRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQL 625
            K +  D T I+ LP S   L  LE L +  C  +  LP  +G L  L  +    +A+  L
Sbjct: 777  KELLLDGTAISNLPDSIFCLQKLEKLSLMGCRSIQELPTCVGKLTSLEELYLDDTALQNL 836

Query: 626  PSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEI 685
            P S+     L+ L   HC  L   P T +  L ++  L ++  AV E+P     L  L  
Sbjct: 837  PDSIGNLKNLQKLHFMHCASLSKIPDT-INELKSLKELFLNGSAVEELPLNPGSLPDLSD 895

Query: 686  LYLSGNNF-ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
            L   G  F + +P+ I  ++ L  + L D   +++LPE    L +LH ++ +  +SL  L
Sbjct: 896  LSAGGCKFLKHVPSSIGGLNYLLQLQL-DRTPIETLPEEIGDLHFLHKLELRNCKSLKGL 954

Query: 745  PFCLESLD------LTGCNMLRSLPELPLCLQ---YLNLEDCNMLRSLPE 785
            P  ++ +D      L G N + +LPE    L+    L + +C  LR LPE
Sbjct: 955  PESIKDMDQLHSLYLEGSN-IENLPEDFGKLEKLVLLRMNNCKKLRGLPE 1003


>gi|15241609|ref|NP_199300.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2660663|gb|AAC79134.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|10177477|dbj|BAB10868.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007787|gb|AED95170.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1170

 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 296/1019 (29%), Positives = 450/1019 (44%), Gaps = 188/1019 (18%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            DS +T + VGI GM GIGKTTLA+ ++ ++ H+FE S F  D         G+  LQK++
Sbjct: 272  DSLET-KTVGIVGMPGIGKTTLAETLYRKWEHKFERSMFFPDA-SKMANEHGMCWLQKRL 329

Query: 62   LSTTLSE-KLEVAGPNIPH-FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
            L   L +  L +      H F K+ +   K+ +V+D+V+   Q++ L G+ +    GS+I
Sbjct: 330  LEELLKDTNLNIGYTTNEHEFCKDVLLLKKVFLVIDNVSSEEQIETLFGKWNWIKNGSKI 389

Query: 120  VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
            V+T+ D+ +L+ F    K  Y V  L   ++   F N AF  +    +L   S+  ++Y 
Sbjct: 390  VITSSDESMLKGFV---KDTYVVPSLNSRDSLLWFTNHAFGLDDAQGNLVKLSKHFLNYA 446

Query: 180  KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            KGNPL L   G  LC K K+ W K +  L  I    I D+   L+  +++LT R K IFL
Sbjct: 447  KGNPLALGAFGVELCGKDKADWEKRIKTLTLISNKMIQDV---LRRRYDELTERQKDIFL 503

Query: 240  DIACFFEGEDKDFVASILD--DSES----DVLDILIDKSLVSISGNFLNMHDILQEMGRQ 293
            D+ACFF+ E++ +V  +++  DSES    D +  L  K LV+ISG  + MHDIL    ++
Sbjct: 504  DVACFFKSENESYVRHVVNSCDSESTKSWDEITDLKGKFLVNISGGRVEMHDILCTFAKE 563

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMS 352
            +  Q   ++     RLW+ ++I   L +    + + GIFLD+SK+ + +  D   F+NM 
Sbjct: 564  LASQALTEDTRVHLRLWNYQDIMWFLNNELEMENVRGIFLDMSKVPEEMTFDGNIFSNMC 623

Query: 353  NLRLFKFYVPKFY-EIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NLR  K Y    + E E +    T  +     +QLP  LD    K+RYLHW  YP   LP
Sbjct: 624  NLRYLKIYSSVCHKEGEGIFKFDTVRE-----IQLP--LD----KVRYLHWMKYPWEKLP 672

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
            S+F P+NLV+L L  S +++ WEG K        N  Y                      
Sbjct: 673  SDFNPENLVDLELPYSSIKKVWEGVKDTPILKWANLSY---------------------- 710

Query: 472  CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
                               S K+T L LG S  +          +LE L+L GC  L ++
Sbjct: 711  -------------------SSKLTNL-LGLSNAK----------NLERLNLEGCTSLLKL 740

Query: 532  STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
                  ++SLV L +  C +L     I                          +  L++L
Sbjct: 741  PQEMENMKSLVFLNMRRCTSLTCLQSI-------------------------KVSSLKIL 775

Query: 592  FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
             + DCSKL+       +LE LY      +AI  LP +      L  L+   C  LES   
Sbjct: 776  ILSDCSKLEEFEVISENLEELYL---DGTAIKGLPPAAGDLTRLVVLNMEGCTELES--- 829

Query: 652  TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIH 710
                                 +P+ +    +L+ L LSG +  ES+P  +K M  LR + 
Sbjct: 830  ---------------------LPKRLGKQKALQELVLSGCSKLESVPTDVKDMKHLRLLL 868

Query: 711  LEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQ 770
            L D   ++ +P++               +SL  L  CL S ++   N+  +L +    L+
Sbjct: 869  L-DGTRIRKIPKI---------------KSLKCL--CL-SRNIAMVNLQDNLKDFS-NLK 908

Query: 771  YLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQ 830
             L +++C  LR LP LP CL+ L V  C RL+S+   L+      A  L      S    
Sbjct: 909  CLVMKNCENLRYLPSLPKCLEYLNVYGCERLESVENPLV------ADRLTLFLDRS---- 958

Query: 831  WAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSEL 890
               E L+S    F FTNC  L   A + I   +  +   +A+      YE  I      +
Sbjct: 959  ---EELRST---FLFTNCHNLFQDAKDSISTYAKWKCHRLAVEC----YEQDI------V 1002

Query: 891  RGSLI--VLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFR 948
             G+      PG  +P WF +Q+ GS +  +L PH     L G A CAV+   +       
Sbjct: 1003 SGAFFNTCYPGYIVPSWFDHQAVGSVLEPRLEPHWYNTMLSGIALCAVVSFHENQDPIIG 1062

Query: 949  YFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTI 1007
             F V      E +  S     D+G  +     +I++D V +G+  C  +      HH+I
Sbjct: 1063 SFSVKCTLQFENEDGSLRFDCDIGCLNE--PGMIEADHVFIGYVTCSRL----KDHHSI 1115


>gi|332330344|gb|AEE43930.1| TIR-NBS-LRR resistance protein muRdr1F [Rosa multiflora]
          Length = 1161

 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 227/700 (32%), Positives = 353/700 (50%), Gaps = 100/700 (14%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           + ++ V+ +GIWGMGG+GKTTLA+ ++++ SH F+   F++++R  S T  GL +LQKQ+
Sbjct: 212 EEANDVRFIGIWGMGGLGKTTLARVVYEEISHRFDVRVFLANIREVSATH-GLVYLQKQI 270

Query: 62  LSTTLSE---KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           LS  L E   K+      I   TK  +    +L+VLDDV++  QL+ L+GE D FG  SR
Sbjct: 271 LSQILKEENVKVWDVYSGIT-MTKRCLCNKAVLLVLDDVDQSEQLEHLVGEKDWFGLRSR 329

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I++TTR+ RVL    G EK  Y +  L  +EA + F   AF++    ED     +S V+Y
Sbjct: 330 IIITTRNLRVLVT-HGVEKP-YELKRLNKDEALQLFSWKAFRKCEPEEDNAELCKSFVTY 387

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL L+ LGS L  +    W   L  L    ++    +++ILK+SF+ L    K IF
Sbjct: 388 AGGLPLALKTLGSFLYKRSLHSWSSALQKLQ---QTPNRSVFEILKLSFDGLDEMEKKIF 444

Query: 239 LDIACF---FEGEDKDFVASILDDSESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQI 294
           LDIACF   ++ E         D      +D+L++KSL++IS  N +++HD++ EMG +I
Sbjct: 445 LDIACFRRLYDNESMIEQVHSFDFCPRITIDVLVEKSLLTISSDNRVDVHDLIHEMGCEI 504

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VRQE+ KEPG RSRL    +I  V   N GT+AIEGI L L++++  + +  AF+ M  L
Sbjct: 505 VRQEN-KEPGGRSRLCLRNDIFHVFTKNTGTEAIEGILLHLAELEEADWNLEAFSKMCKL 563

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           +L   +                       ++L  G  YLP  LR+L+W  YP ++LP  F
Sbjct: 564 KLLYIH----------------------NLRLSLGPIYLPNALRFLNWSWYPSKSLPPCF 601

Query: 415 KPKNLVELNLRCSKVEQPWEGEK----------------------------------ACV 440
           +P  L EL+L  S ++  W G+K                                   C+
Sbjct: 602 QPDKLTELSLVHSNIDHLWNGKKYLGNLKSIDLSDSINLTRTPDFTGIPNLEKLILEGCI 661

Query: 441 P-----SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK-- 493
                  SI + K L   +F+ C+S++S PS ++     T + S C  L   P+  G+  
Sbjct: 662 SLVKIHPSIASLKRLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQTK 721

Query: 494 -VTRLYLGQSAIEEVPSSIECLTD-LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
            +++L +G SA+E +PSS E L++ L  LDL G    ++  + F K    V+   L    
Sbjct: 722 TLSKLCIGGSAVENLPSSFERLSESLVELDLNGIVIREQPYSLFLKQNLRVSFFGL---- 777

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDN-LPDNIGSLE 610
              FP                 P+T L +S ++   L  L + DC+  +  +P++IG L 
Sbjct: 778 ---FPR------------KSPCPLTPLLASLKHFSSLTQLKLNDCNLCEGEIPNDIGYLS 822

Query: 611 YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
            L  +    +    LP+S+ L + L+ ++  +CK L+  P
Sbjct: 823 SLELLQLIGNNFVNLPASIHLLSKLKRINVENCKRLQQLP 862



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 187/473 (39%), Gaps = 98/473 (20%)

Query: 493  KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
            K+T L L  S I+ + +  + L +L+ +DL     L R +  F  + +L  LIL GC++L
Sbjct: 605  KLTELSLVHSNIDHLWNGKKYLGNLKSIDLSDSINLTR-TPDFTGIPNLEKLILEGCISL 663

Query: 553  EHFPEILEKMEHLKRIYSDRT--PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
                  +  ++ LK I++ R    I  LPS   N+  LE   V  CSKL  +P+ +G  +
Sbjct: 664  VKIHPSIASLKRLK-IWNFRNCKSIKSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQTK 721

Query: 611  YLYYILAAASAISQLPSSVA-LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA 669
             L  +    SA+  LPSS   LS  L  LD                         ++   
Sbjct: 722  TLSKLCIGGSAVENLPSSFERLSESLVELD-------------------------LNGIV 756

Query: 670  VREIPQEIAYLSSLEILYL------SGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL 723
            +RE P  +    +L + +       S      L A +K  S L  + L D N+ +   E+
Sbjct: 757  IREQPYSLFLKQNLRVSFFGLFPRKSPCPLTPLLASLKHFSSLTQLKLNDCNLCEG--EI 814

Query: 724  PLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC--LQYLNLEDCNMLR 781
            P  + YL                 LE L L G N +     + L   L+ +N+E+C  L+
Sbjct: 815  PNDIGYLS---------------SLELLQLIGNNFVNLPASIHLLSKLKRINVENCKRLQ 859

Query: 782  SLPELPLCLQLLTVR-NCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAA 840
             LPELP   +L  V  NC  LQ  P+                    P+L   PE   S  
Sbjct: 860  QLPELPATDELRVVTDNCTSLQVFPD-------------------PPNLSRCPEFWLSG- 899

Query: 841  ICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMA----------------IN 884
                  NC +  G    +    S L+     ++                         + 
Sbjct: 900  -----INCFRAVGNQGFRYFLYSRLKQLLEVLSLSLCLSLPPSLPPLSLSLVNMMVCMVQ 954

Query: 885  EKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
            E    L    +V+PGSEIP+WF+NQS G S+  +LP ++     IG A C ++
Sbjct: 955  ETPWSLYYFRLVIPGSEIPEWFNNQSVGDSVIEKLPSYACNSKWIGVALCFLI 1007


>gi|356522594|ref|XP_003529931.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1068

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 238/740 (32%), Positives = 363/740 (49%), Gaps = 103/740 (13%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM--LSTTLSEKLEVAGPNI 77
           KTT+A+ +++    +F+ SCF+ ++R  S+T  GL H+QK++  L     ++L +   + 
Sbjct: 220 KTTIARKVYEAIKGDFDVSCFLENIREVSKT-NGLVHIQKELSNLGVIFRDQLRIVDFDN 278

Query: 78  PHFTK----ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFR 133
            H  K      +   K+L+VLDDV+E+ QL+ L G+ + FG GSR+++TTRDK +L K  
Sbjct: 279 LHDGKMIIANSLSNKKVLLVLDDVSELSQLENLAGKQEWFGPGSRVIITTRDKHLL-KTH 337

Query: 134 GEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSL 193
           G      +   L   EA +  C  AFK +   +      + ++   +G PL LEVLGS L
Sbjct: 338 GVHLTC-KARALAQNEALQLICLKAFKRDQPKKGYLNLCKEMIECARGLPLALEVLGSHL 396

Query: 194 CLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFV 253
             +    W   L  +     S+I D    LKIS++ L P  + +FLDIACFF+G D D V
Sbjct: 397 HGRNVEVWHSALEQIRSFPHSKIQDK---LKISYDSLQPPYQKMFLDIACFFKGMDIDEV 453

Query: 254 ASIL---DDSESDVLDILIDKSLVSIS--GNFLNMHDILQEMGRQIVRQESEKEPGKRSR 308
            +IL    D     +DILI++ LV++    N L MHD+LQEMGR IV +ES  +PGKRSR
Sbjct: 454 KNILRNCGDYPEIGIDILIERCLVTLDRVKNKLGMHDLLQEMGRNIVFEESPNDPGKRSR 513

Query: 309 LWDPKEISRVLKHNKGTDAIEGIFLDLSKI--KGINLDPRAFTNMSNLRLFKFYVPKFYE 366
           LW  K+I  VL  NKGTD I+G+ L+L +     +  +  AF+ M  LRL K        
Sbjct: 514 LWSEKDIDYVLTKNKGTDKIQGMVLNLVQPYDSEVLWNTGAFSKMGQLRLLKL------- 566

Query: 367 IEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRC 426
                            +QLP GL+ LP  L+ LHW   PL+ LP               
Sbjct: 567 ---------------CDMQLPLGLNCLPSALQVLHWRGCPLKALPL-------------- 597

Query: 427 SKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIE 486
                 W G K      ++  K                           I+ S+  NL +
Sbjct: 598 ------WHGTKL-----LEKLK--------------------------CIDLSFSKNLKQ 620

Query: 487 FPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVT 543
            P       +  L L G +++ EV  S+     L +++L  CKRLK + ++  ++ SL  
Sbjct: 621 SPDFDAAPNLESLVLEGCTSLTEVHPSLVRHKKLAMMNLEDCKRLKTLPSNM-EMSSLKY 679

Query: 544 LILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLP 603
           L L GC   ++ PE  E ME L  +    TPIT+LPSS   L GL  L +++C  L  LP
Sbjct: 680 LNLSGCSEFKYLPEFGESMEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLP 739

Query: 604 DNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGL 662
           D    L+ L ++ +   S +  LP  +     ++ L+       +S P +  L L ++  
Sbjct: 740 DTFHKLKSLKFLDVRGCSKLCSLPDGL---EEMKCLEQICLSADDSLPPS-KLNLPSLKR 795

Query: 663 LHIS--DYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSL 720
           +++S  + +   IP E  +LS L+    + NNF +LP+ I ++++L  + L     LQ L
Sbjct: 796 INLSYCNLSKESIPDEFCHLSHLQKTDPTRNNFVTLPSCISKLTKLELLILNLCKKLQRL 855

Query: 721 PELPLCLKYLHLIDCKMLQS 740
           PELP  ++ L   +C  L++
Sbjct: 856 PELPSSMQQLDASNCTSLET 875



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 202/472 (42%), Gaps = 63/472 (13%)

Query: 493 KVTRLYLGQSAIEEVPSSIECL-TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
           K+ +L L +    ++P  + CL + L+VL  RGC                     L  L 
Sbjct: 557 KMGQLRLLKLCDMQLPLGLNCLPSALQVLHWRGCP--------------------LKALP 596

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNL-PDNIGSLE 610
           L H  ++LEK++ +   +S    + + P  F+  P LE L +E C+ L  + P  +   +
Sbjct: 597 LWHGTKLLEKLKCIDLSFSKN--LKQSPD-FDAAPNLESLVLEGCTSLTEVHPSLVRHKK 653

Query: 611 YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV 670
                L     +  LPS++ +S+ L+ L+ S C   +  P  F   +  + LL + +  +
Sbjct: 654 LAMMNLEDCKRLKTLPSNMEMSS-LKYLNLSGCSEFKYLPE-FGESMEQLSLLILKETPI 711

Query: 671 REIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY 729
            ++P  +  L  L  L L    N   LP    ++  L+F+ +   + L SLP+    +K 
Sbjct: 712 TKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLKSLKFLDVRGCSKLCSLPDGLEEMKC 771

Query: 730 LHLIDCKMLQSLPVLPFCLESL---DLTGCNMLR-SLPELPLCLQYLNLEDCNMLRSLPE 785
           L  I      SLP     L SL   +L+ CN+ + S+P+    L +L   D     +   
Sbjct: 772 LEQICLSADDSLPPSKLNLPSLKRINLSYCNLSKESIPDEFCHLSHLQKTDPTR-NNFVT 830

Query: 786 LPLC------LQLLTVRNCNRLQSLPEILLCLQELDASVLEKL--SKHSPDLQWAPESLK 837
           LP C      L+LL +  C +LQ LPE+   +Q+LDAS    L  SK +P     P SL 
Sbjct: 831 LPSCISKLTKLELLILNLCKKLQRLPELPSSMQQLDASNCTSLETSKFNPS---KPRSLF 887

Query: 838 SAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVL 897
           ++     F    +L G    +++      ++ + +   R G                + +
Sbjct: 888 ASPAKLHFPR--ELKGHLPRELIG-LFENMQELCLPKTRFG----------------MFI 928

Query: 898 PGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRY 949
            GSEIP WF  + S S   I +P +      +GFA C +L S  V  +  R+
Sbjct: 929 TGSEIPSWFVPRKSVSFAKIAVPHNCPVNEWVGFALCFLLVSYAVPPEACRH 980


>gi|20197836|gb|AAM15274.1| disease resistance protein (TIR-NBS-LRR class), putative
           [Arabidopsis thaliana]
          Length = 972

 Score =  297 bits (760), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 250/802 (31%), Positives = 396/802 (49%), Gaps = 112/802 (13%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVR------GNSETAGGLEHLQKQ 60
           V+++GIWG  GIGKTT+ + +++Q S  FE S F+ +++       +S+       LQ+Q
Sbjct: 251 VRMIGIWGPPGIGKTTIVRFLYNQLSSSFELSIFMENIKTMHTILASSDDYSAKLILQRQ 310

Query: 61  MLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            LS  L  K       IPH    +ER+   K+L+VLDDV++  QL  L  E   FG  SR
Sbjct: 311 FLSKILDHK----DIEIPHLRVLQERLYNKKVLVVLDDVDQSVQLDALAKETRWFGPRSR 366

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I++TT+D+++L+  R     IY+V+    ++A + FC +AF +   P D  +     V++
Sbjct: 367 ILITTQDRKLLKAHR--INNIYKVDLPNSDDALQIFCMYAFGQK-TPYDGFYKLARKVTW 423

Query: 179 TKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
             GN PL L V+GS      K  W K +  L    + +I  +   LK S++ L    K +
Sbjct: 424 LVGNFPLGLRVVGSYFREMSKQEWRKEIPRLRARLDGKIESV---LKFSYDALCDEDKDL 480

Query: 238 FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FL IACFF  E  + +   L  +  D+     +L +KSL+SI+ NF+ MHD L ++G++I
Sbjct: 481 FLHIACFFNHESIEKLEDFLGKTFLDIAQRFHVLAEKSLISINSNFVEMHDSLAQLGKEI 540

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHN-KGTDAIEGIFLDLSKIKGI-NLDPRAFTNMS 352
           VR++S +EPG+R  L D ++IS VL  +  G  ++ GI+LDL +   + N+  +AF  MS
Sbjct: 541 VRKQSVREPGQRQFLVDARDISEVLADDTAGGRSVIGIYLDLHRNDDVFNISEKAFEGMS 600

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NL+  +  V  F  +   P++          V LP+ L Y+ +KLR L W  +P+   PS
Sbjct: 601 NLQFLR--VKNFGNL--FPAI----------VCLPHCLTYISRKLRLLDWMYFPMTCFPS 646

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
            F P+ LVELN+  SK+E+ WE         IQ  + L  +     ++L+  P       
Sbjct: 647 KFNPEFLVELNMWGSKLEKLWE--------EIQPLRNLKRMDLFSSKNLKELPDLSSATN 698

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYL----GQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
              +N + C +L+E P   G  T+L      G S++ E+PSSI    +L+ +D   C+ L
Sbjct: 699 LEVLNLNGCSSLVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENL 758

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSD-RTPITELPSSFENLPG 587
             + +S     +L  L L  C +L+  P  +    +LK+++    + + ELPSS  N   
Sbjct: 759 VELPSSIGNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTN 818

Query: 588 LEVLFVEDCSKLDNLPDNIG---SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
           L+ L +  CS L  LP +IG   +LE L  ILA   ++ +LPS +  +  L+ L+     
Sbjct: 819 LKELHLTCCSSLIKLPSSIGNAINLEKL--ILAGCESLVELPSFIGKATNLKILN----- 871

Query: 645 GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
                                           + YLS L            LP+ I  + 
Sbjct: 872 --------------------------------LGYLSCL----------VELPSFIGNLH 889

Query: 705 QLRFIHLEDFNMLQSLPELPLCLKYLH---LIDCKMLQSLPVLPFCLESLDLTGCNMLRS 761
           +L  + L     LQ LP   + L++L+   L DC +L++ PV+   ++ L L G      
Sbjct: 890 KLSELRLRGCKKLQVLPT-NINLEFLNELDLTDCILLKTFPVISTNIKRLHLRGTQ---- 944

Query: 762 LPELPLCLQ-YLNLEDCNMLRS 782
           + E+P  L+ +  LED  ML S
Sbjct: 945 IEEVPSSLRSWPRLEDLQMLYS 966



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 148/314 (47%), Gaps = 28/314 (8%)

Query: 541 LVTLILLGCLNLEHFPEILEKMEHLKR--IYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
           LV L + G   LE   E ++ + +LKR  ++S +  + ELP    +   LEVL +  CS 
Sbjct: 653 LVELNMWGS-KLEKLWEEIQPLRNLKRMDLFSSKN-LKELPD-LSSATNLEVLNLNGCSS 709

Query: 599 LDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGL 657
           L  LP +IG+   L  + L+  S++ +LPSS+  +  L+++D SHC+ L   P +     
Sbjct: 710 LVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNAT 769

Query: 658 SAMGLLHISDYAVREIPQEIAYLSSLEILYL-SGNNFESLPAIIKQMSQLRFIHLEDFNM 716
           +   L      +++E+P  I   ++L+ L+L   ++ + LP+ I   + L+ +HL   + 
Sbjct: 770 NLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCCSS 829

Query: 717 LQSLPEL---PLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC----- 768
           L  LP      + L+ L L  C+ L  LP       +L +     L  L ELP       
Sbjct: 830 LIKLPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKILNLGYLSCLVELPSFIGNLH 889

Query: 769 -LQYLNLEDCNMLRSLPELPLCLQLLT---VRNCNRLQSLPEILLCLQELDASVLEKLSK 824
            L  L L  C  L+ LP   + L+ L    + +C  L++ P I        ++ +++L  
Sbjct: 890 KLSELRLRGCKKLQVLPT-NINLEFLNELDLTDCILLKTFPVI--------STNIKRLHL 940

Query: 825 HSPDLQWAPESLKS 838
               ++  P SL+S
Sbjct: 941 RGTQIEEVPSSLRS 954


>gi|356522934|ref|XP_003530097.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1031

 Score =  297 bits (760), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 200/518 (38%), Positives = 293/518 (56%), Gaps = 41/518 (7%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPN-IP 78
           KTTLA AIF + S  +EG+CF+ +V   S+    L ++  ++LS  L E L +     IP
Sbjct: 233 KTTLAAAIFHKVSSHYEGTCFLENVAEESKRHD-LNYVCNKLLSQLLREDLHIDTLKVIP 291

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIG-ELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
                +++R K+ IVLDDVN    L++L+G   +  G GSRI+VTTRDK VL   R    
Sbjct: 292 SIVTRKLKRKKVFIVLDDVNTSELLEKLVGVGREWLGSGSRIIVTTRDKHVL--IREVVD 349

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           KI+ V  + F+ + E F   AF + +  +     S+  + Y KG PL L+VLGS L  + 
Sbjct: 350 KIHEVKKMNFQNSLELFSLNAFGKTYPEKGYEELSKRAMDYAKGIPLALKVLGSFLRSRS 409

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
           ++ W   L  L +   S    I  +L++S+  L    K+IFLDIACF +G+ +D V  IL
Sbjct: 410 ENEWHSALSKLKK---SPNVKIQAVLRLSYAGLDDDEKNIFLDIACFLKGQSRDHVTKIL 466

Query: 258 DDSE--SDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           +D +  +D+ +  L+DK+L++ +  N ++MHD++QEMGR++VR+ES K PG+RSRLWDP 
Sbjct: 467 NDCDFSADIGIRSLLDKALITTTYSNCIDMHDLIQEMGREVVREESVKFPGQRSRLWDPV 526

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           EI  VL +N+GT A+EGI+LD+++I  INL  + F  M NLRL  F         K  + 
Sbjct: 527 EIYDVLTNNRGTAAVEGIWLDMTQITHINLSSKVFRKMPNLRLLTF---------KSHNG 577

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
            +E     + V LP GL++LPK LRYL W+ YPL +LPS F P+ LVEL++  S VE+ W
Sbjct: 578 DSER---INSVYLPKGLEFLPKNLRYLGWNGYPLESLPSRFFPEKLVELSMPYSNVEKLW 634

Query: 434 EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
           +G        +QN   L  +   G + L   P   H       N  Y VN I        
Sbjct: 635 QG--------VQNLPNLERIELCGSKHLVECPRLSH-----APNLKY-VNSISLLSSLKC 680

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
           ++  Y   SAI  +P S + L  L++L++  C+ L+ I
Sbjct: 681 LSFRY---SAIISLPESFKYLPRLKLLEIGKCEMLRHI 715



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 122/302 (40%), Gaps = 71/302 (23%)

Query: 673 IPQEIAYL-SSLEILYLSGNNFESLPAII--KQMSQLRFIHLEDFNMLQSLPELP----- 724
           +P+ + +L  +L  L  +G   ESLP+    +++ +L   +     + Q +  LP     
Sbjct: 587 LPKGLEFLPKNLRYLGWNGYPLESLPSRFFPEKLVELSMPYSNVEKLWQGVQNLPNLERI 646

Query: 725 -LCLKYLHLIDCKMLQSLPVLPFCLESLDLTGC-------NMLRSLPE----LPLCLQYL 772
            LC    HL++C  L   P L +      L+         + + SLPE    LP  L+ L
Sbjct: 647 ELCGSK-HLVECPRLSHAPNLKYVNSISLLSSLKCLSFRYSAIISLPESFKYLPR-LKLL 704

Query: 773 NLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWA 832
            +  C MLR +P LP  +QL  V NC  LQ++                        L  +
Sbjct: 705 EIGKCEMLRHIPALPRSIQLFYVWNCQSLQTV------------------------LSSS 740

Query: 833 PESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINE------- 885
            ES K     F   NC+KL+  + + IL D++ RI    + S  L   +  NE       
Sbjct: 741 AESSKRPNCTFLVPNCIKLDEHSYDAILKDAIARIE---LGSKSLSAVVLENEEDASSDN 797

Query: 886 --------KLSELRGSLIVLPG--SEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCA 935
                   KL+        LP    ++ DWF    + S + I+LPP     NL+ F F  
Sbjct: 798 EGTDFYFFKLARNGTICYCLPARSGKVRDWFHCNFTQSLVTIELPP-----NLLCFIFYM 852

Query: 936 VL 937
           V+
Sbjct: 853 VV 854


>gi|399920201|gb|AFP55548.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1115

 Score =  297 bits (760), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 284/934 (30%), Positives = 414/934 (44%), Gaps = 205/934 (21%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTTLA+ +++  SH+FE   F+++VR  S T G L HLQKQ+LS    E+          
Sbjct: 230 KTTLARLVYENISHQFEVCIFLANVREVSATHG-LVHLQKQILSQIFKEENVQVWDVYSG 288

Query: 80  FTKERVRR----MKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGE 135
            T  R++R     ++L+VLDDV++  QL+ L+GE D FG  SRI++TTR++ VL    G 
Sbjct: 289 IT--RIKRCFWNKEVLLVLDDVDQSEQLENLVGEKDWFGLRSRIIITTRNRHVLVT-HGI 345

Query: 136 EKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
           EK  Y + GL+ +EA + F   AF+     ED    S+S V Y  G PL L++LGS L  
Sbjct: 346 EKP-YELKGLKVDEALQLFSWKAFRNYEPEEDFAEESKSFVRYAGGLPLALKILGSFLYK 404

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           +    W      L +        +++ILK+SF+ L    K IFLDIACF      + +  
Sbjct: 405 RSLDSWSSSFQKLKQTPNP---TVFEILKVSFDGLDDMEKKIFLDIACFRWLYHNESMIE 461

Query: 256 ILDDSE---SDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
            +  SE      +D+L++KSL++IS  N++ MHD++QEMG +IVR+E+E EPG RSRLW 
Sbjct: 462 QVYSSEFCSHIAIDVLVEKSLLTISSYNWIYMHDLIQEMGCEIVRKENE-EPGGRSRLWL 520

Query: 312 PKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
            K+I  V   N GT+AIEGI L L +++  + +  AF+ M  L+L   +           
Sbjct: 521 RKDIFHVFTKNTGTEAIEGISLHLYELEEADWNLEAFSKMCKLKLLYIH----------- 569

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
                       ++L  G  ++P  LR+L W  YP ++LP  F+P  L EL+L  S ++ 
Sbjct: 570 -----------NLRLSLGPKFIPNALRFLSWSWYPSKSLPPCFQPDELTELSLVHSNIDH 618

Query: 432 PWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS 491
            W G K                          +  NL      +IN SY +NL   P  +
Sbjct: 619 LWNGIK--------------------------YSRNLK-----SINLSYSINLTRTPDFT 647

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
           G                     + +LE L L GC  L ++  S   L+ L       C  
Sbjct: 648 G---------------------IPNLEKLVLEGCTNLVKVHPSIALLKRLKIWNFRNC-- 684

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
                                  I  LPS   N+  LE   V  CSKL  +P+ +G ++ 
Sbjct: 685 ---------------------KSIKSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQMKR 722

Query: 612 LYYILAAASAISQLPSSVA-LSNMLRSLDSSHCKGLESFPRTFL---LGLSAMGLLHISD 667
           L  +    +AI +LPSS+  LS  L  LD S     E     FL   L  S+ GL     
Sbjct: 723 LSKLSLGGTAIEKLPSSIEHLSESLVELDLSGLVIREQPYSRFLKQNLIASSFGLF---- 778

Query: 668 YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCL 727
              R+ P  +                  L A +K  S L  ++L D N+ +   E+P  +
Sbjct: 779 --PRKRPHPLV----------------PLLASLKHFSSLTTLNLNDCNLCEG--EIPNDI 818

Query: 728 KYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC--LQYLNLEDCNMLRSLPE 785
             L  ++   L+               G N +     + L   L+++N+E+C  L+ LPE
Sbjct: 819 GSLSSLESLELR---------------GNNFVSLSASIHLLSKLKHINVENCRRLQQLPE 863

Query: 786 LPLCLQLLTVR-NCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESL-KSAAICF 843
           LP    L  V  NC  LQ  P+                          P+ L +     F
Sbjct: 864 LPASDYLRVVTDNCTSLQMFPD--------------------------PQDLCRIGNFEF 897

Query: 844 EFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIP 903
              NCL   G  +      S+L+         RL  E   + +         V+PGSEIP
Sbjct: 898 NCVNCLSTVGNQDASYFLYSVLK---------RLLEETHRSSEYFRF-----VIPGSEIP 943

Query: 904 DWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
           +WF+NQS G S+  +LP   S    IGFA CA++
Sbjct: 944 EWFNNQSVGDSVTEKLP---SDYMWIGFAVCALI 974


>gi|15234324|ref|NP_195338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2961374|emb|CAA18121.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7270567|emb|CAB81524.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332661225|gb|AEE86625.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1179

 Score =  296 bits (759), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 220/694 (31%), Positives = 348/694 (50%), Gaps = 82/694 (11%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           DT+ I G+ GM GIGKTTL   +++++ H+F    F+ DVR   +       +  + L  
Sbjct: 235 DTLTI-GVVGMPGIGKTTLTSMLYEKWQHDFLRCVFLHDVRKMWKDCMMDRSIFIEELLK 293

Query: 65  TLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
             +   EVA  + P   K  +   K L+VLD+V++  Q++ L+GE D   +GSRI +TT 
Sbjct: 294 DDNVNQEVADFS-PESLKALLLSKKSLVVLDNVSDKKQIEVLLGESDWIKRGSRIFITTS 352

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH--SRSVVSYTKGN 182
           D+ V+E    +  ++ R+ G    ++FE+F  FAF    CP    +   SR    Y KGN
Sbjct: 353 DRSVIEGMVDDTYEVLRLTG---RDSFEYFSYFAFSGKLCPPVRTFMNLSRLFADYAKGN 409

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L++LG  L  K K+HW +    L+++ +S    I D+L++S+++L    K +FLD+A
Sbjct: 410 PLALKILGKELNGKDKTHWEE---KLSKLMQSPNKTIQDVLRVSYDELGLSHKDVFLDVA 466

Query: 243 CFFEGEDKDFVASILDDSESDVLDI------LIDKSLVSISGNFLNMHDILQEMGRQIVR 296
           CFF   D+ +V  +++  +++ +D       L  K L++ISG  + MHD+L   G+++  
Sbjct: 467 CFFRSGDEYYVRCLVESCDTEAIDTVSEIKDLASKFLINISGGRVEMHDLLYTFGKELGS 526

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLR 355
           Q S        RLW+ K +   LK+  G  A+ GIFLD+S++K  + LD   F  M NLR
Sbjct: 527 QGSR-------RLWNHKAVVGALKNRVG--AVRGIFLDMSELKKKLPLDRSTFIKMRNLR 577

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
             KFY           S    E  + SK+  P GL++   ++RYL+W  +PL  LP +F 
Sbjct: 578 YLKFY----------SSRCDRECEADSKLNFPEGLEFPLDEIRYLYWLKFPLMKLPKDFN 627

Query: 416 PKNLVELNLRCSKVEQPWEGEK----------------------------------AC-- 439
           PKNL + NL  S++E+ WEG K                                   C  
Sbjct: 628 PKNLTDFNLPYSEIEELWEGAKDTQKLKWVDLSHSRKLCNLSGLLNAESLQRLNLEGCTS 687

Query: 440 ---VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR 496
              +P  ++  K L  L+ +GC SLR  P  ++ +   T+  + C ++ +F  IS  +  
Sbjct: 688 LEELPREMKRMKSLIFLNMRGCTSLRVLP-RMNLISLKTLILTNCSSIQKFQVISDNLET 746

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
           L+L  +AI ++P+ +  L  L VL+L+ CK L  +     KL++L  L+L GC  L+ F 
Sbjct: 747 LHLDGTAIGKLPTDMVKLQKLIVLNLKDCKMLGAVPEFLGKLKALQELVLSGCSKLKTFS 806

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
             +E M+ L+ +  D T + E+P     L       VED  +L    + + SL  L   L
Sbjct: 807 VPIETMKCLQILLLDGTALKEMP----KLLRFNSSRVEDLPELRRGINGLSSLRRL--CL 860

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           +  + IS L   +     L+ LD  +CK L S P
Sbjct: 861 SRNNMISNLQIDINQLYHLKWLDLKYCKNLTSIP 894



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 158/618 (25%), Positives = 262/618 (42%), Gaps = 95/618 (15%)

Query: 443  SIQNFKYLSALSFKGCQ--SLRSFPSNLHFVCPVT-INFSYCVN--LIEFPQI--SGKVT 495
            +++  K+ S+   + C+  S  +FP  L F  P+  I + Y +   L++ P+      +T
Sbjct: 575  NLRYLKFYSSRCDRECEADSKLNFPEGLEF--PLDEIRYLYWLKFPLMKLPKDFNPKNLT 632

Query: 496  RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
               L  S IEE+    +    L+ +DL   ++L  +S       SL  L L GC +LE  
Sbjct: 633  DFNLPYSEIEELWEGAKDTQKLKWVDLSHSRKLCNLS-GLLNAESLQRLNLEGCTSLEEL 691

Query: 556  PEILEKMEHLKRIYSDR---TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
            P  +++M+ L  I+ +    T +  LP    NL  L+ L + +CS +        +LE L
Sbjct: 692  PREMKRMKSL--IFLNMRGCTSLRVLPRM--NLISLKTLILTNCSSIQKFQVISDNLETL 747

Query: 613  YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VR 671
            +      +AI +LP+ +     L  L+   CK L + P  FL  L A+  L +S  + ++
Sbjct: 748  HL---DGTAIGKLPTDMVKLQKLIVLNLKDCKMLGAVPE-FLGKLKALQELVLSGCSKLK 803

Query: 672  EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
                 I  +  L+IL L G   + +P +      LRF    + + ++ LPEL   +  L 
Sbjct: 804  TFSVPIETMKCLQILLLDGTALKEMPKL------LRF----NSSRVEDLPELRRGINGLS 853

Query: 732  LIDCKMLQSLPVLPFCLESLDLTGCNMLRSLP---ELPLCLQYLNLEDCNMLRSLPELPL 788
                            L  L L+  NM+ +L         L++L+L+ C  L S+P LP 
Sbjct: 854  ---------------SLRRLCLSRNNMISNLQIDINQLYHLKWLDLKYCKNLTSIPLLPP 898

Query: 789  CLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNC 848
             L++L    C +L+++   +  L+ +                   E ++S    F FTNC
Sbjct: 899  NLEILDAHGCEKLKTVASPMALLKLM-------------------EQVQSK---FIFTNC 936

Query: 849  LKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSN 908
              L   A N I + +    R   + + R   E  ++E L      +   PGS++P WF+ 
Sbjct: 937  NNLEQVAKNSITSYAQ---RKSQLDARRCYKEGGVSEALF-----IACFPGSDVPSWFNY 988

Query: 909  QSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKT-LSETK 967
            Q+ GS++ ++LPPH     L   A CAV+       +  R+   S +   E K  L    
Sbjct: 989  QTFGSALRLKLPPHWCDNRLSTIALCAVVTFPDTQDEINRF---SIECTCEFKNELGTCI 1045

Query: 968  HVDLGYNSRYIEDL-IDSDRVILGF----------KPCLNVGFPDGYHHTIATFKFFAER 1016
                     +IE   IDSD V +G+          +  L +   D    T A+ +F    
Sbjct: 1046 RFSCTLGGSWIESRKIDSDHVFIGYTSSSHITKHLEGSLKLKEHDKCVPTEASIEFEVID 1105

Query: 1017 KFYKIKRCGLCPVYANPS 1034
               +I  CGL  VY  P+
Sbjct: 1106 GAGEIVNCGLSLVYEEPN 1123


>gi|51477386|gb|AAU04759.1| MRGH11 [Cucumis melo]
          Length = 1001

 Score =  296 bits (759), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 246/780 (31%), Positives = 385/780 (49%), Gaps = 107/780 (13%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V+ V I GMGGIGKTT+A+ +FD    +F+  CF++   G+S+ +  L  LQ++MLS 
Sbjct: 219 DDVRFVAIVGMGGIGKTTIAQVVFDCILSKFDDCCFLTLPGGDSKQS--LVSLQREMLSQ 276

Query: 65  TL-SEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
               E  ++   N      K R+   K+LIVLD   E  QL+ L G  + FG GSRI++T
Sbjct: 277 IFHKEDFKIWHENHGVEMIKNRLSGRKVLIVLDGAEERRQLEMLAGSTEWFGPGSRIIIT 336

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH-SRSVVSYTKG 181
           TR+K +L     +E K Y V  L+ + A + F   AF  NH  +D     S  +V   K 
Sbjct: 337 TRNKGLLCHPNYDEMKEYNVEELDHDSALQLFLKHAFGSNHQNKDSFMDLSNEIVEKAKR 396

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L V+GSSL  K  + W + L  L ++ E    + +DILKIS++ L    + +FLDI
Sbjct: 397 LPLALRVIGSSLYGKEITIWRETLKRLIKVDE---RNFFDILKISYDGLGVESQQVFLDI 453

Query: 242 ACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
            CFF G+++D V  IL+    S +  L +L+ + L+ +S   + +HD++ EMGR+IVR+E
Sbjct: 454 TCFFNGKNEDRVNEILESFGYSPNSELQLLMQRCLIEVSHKKILVHDLILEMGREIVRKE 513

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK--IKGINLDPRAFTNMSNLRL 356
           S  +P K+SR+W  +++            I+GI L L K   + I LD  +F+ M+ LR+
Sbjct: 514 SLTQPEKQSRIWLHEDLYCRFAEKHDLMHIQGIVLSLEKEMEESIELDAESFSEMTKLRI 573

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
                                 L  + V+L   ++YL   LR ++W  YP ++LP  F+ 
Sbjct: 574 ----------------------LEINNVELDEDIEYLSPLLRIINWLGYPSKSLPPTFQS 611

Query: 417 KNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI 476
           + L EL L  S++ + W+G++         F  L  +     + LR           VT 
Sbjct: 612 RYLFELLLPHSQLLRVWDGKR--------RFPKLKLIDVSNSEHLR-----------VTP 652

Query: 477 NFSYCVNLIEFPQISGKVTRLYLGQSA-IEEVPSSIECLTDLEVLDLRGCKRLKRISTSF 535
           +FS   NL           RL L     + E+  SI  L  L +LDL GC  LK    + 
Sbjct: 653 DFSGVPNL----------ERLVLCNCVRLCEIHPSINSLNKLILLDLEGCGDLKHFPANI 702

Query: 536 CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
            + ++L TL L G   LE FPEI   MEHL  ++ D + IT L  S   L GL  L +  
Sbjct: 703 -RCKNLQTLKLSGT-GLEIFPEI-GHMEHLTHLHLDGSKITHLHPSIGYLTGLVFLDLST 759

Query: 596 ------------------------CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVAL 631
                                   C +LD +P ++ + E L  +  + ++I+ +PSS+  
Sbjct: 760 CLGLSSLPFEIGNLKSLKTLLLKYCKRLDKIPPSLANAESLETLSISETSITHVPSSII- 818

Query: 632 SNMLRSLDSSHCKGLE-----------SFPRTFLLGLSAMGLLHISDYAV--REIPQEIA 678
            + L++L++  C+ L            +  +T   GL  +  L++    +   +IP+++ 
Sbjct: 819 -HCLKNLETLDCEELSRGIWKSLLPQLNINQTITTGLGCLKALNLMGCKLMDEDIPEDLH 877

Query: 679 YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
             SSLE L LS NNF +LP  +  + +L+ + L     L+ LP+LP  L+Y+  +DC+ +
Sbjct: 878 CFSSLETLDLSYNNFTTLPDSLSHLKKLKTLILNYCTELKDLPKLPESLQYVGGVDCRSM 937


>gi|357452805|ref|XP_003596679.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355485727|gb|AES66930.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1406

 Score =  296 bits (758), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 235/759 (30%), Positives = 365/759 (48%), Gaps = 117/759 (15%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
            D +++VGIWGM GIGKTTLA  ++D+ S +F+ SCF+ +V       GG   LQKQ+L  
Sbjct: 453  DELRVVGIWGMAGIGKTTLASVLYDRISSQFDASCFIENV-SKIYRDGGAVSLQKQILRQ 511

Query: 65   TLSEK-LEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
            T+ EK LE   P+ I    ++R+   K L+VLD+V+ + Q++ L    +  G+GSR+++T
Sbjct: 512  TIDEKYLETYSPSEISGIVRKRLCNRKFLVVLDNVDLLEQVEELAINPELVGKGSRMIIT 571

Query: 123  TRDKRVLEKFRGEEKKI-------YRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
            TR+  +L  + GE+  +       Y V  L   +A E F   AFK      +    +  V
Sbjct: 572  TRNMHILRVY-GEQLSLSHGTCVSYEVPLLNNNDARELFYRKAFKSKDPASECLNLTPEV 630

Query: 176  VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
            + Y +G PL + V+GS LC +  + W   L+   R+  +  + + D L++ F  L    +
Sbjct: 631  LKYVEGLPLAIRVVGSFLCTRNANQWRDALY---RLRNNPDNKVMDALQVCFEGLHSEDR 687

Query: 236  SIFLDIACFFEGEDKDFVASILDDSESD---VLDILIDKSLVSISGNFLNMHDILQEMGR 292
             IFL IACFF+GE +++V  ILD         +  LI+ SL++I    ++MH++LQE+G+
Sbjct: 688  EIFLHIACFFKGEKEEYVKRILDACGLHPHLGIQGLIESSLITIRNQEIHMHEMLQELGK 747

Query: 293  QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
            +IVRQ+  +EPG  SRLW  ++ + V+    GTD ++ I LD  +            ++S
Sbjct: 748  KIVRQQFPEEPGSWSRLWLYEDFNPVMMTETGTDKVKAIILDKKE------------DIS 795

Query: 353  NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
               L K         E L  M   + L          L++L   L+YL W  YP  +LP 
Sbjct: 796  EYPLLK--------AEGLSIMRGLKILILYHTNFSGSLNFLSNSLQYLLWYGYPFASLPL 847

Query: 413  NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
            NF+P  LVELN+ CS +++ W+G K                             NL  + 
Sbjct: 848  NFEPLRLVELNMPCSLIKRLWDGHK-----------------------------NLPCLK 878

Query: 473  PVTINFSYCVNLIEFPQISGK--VTRL-YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
             V ++ S C  L+E P  +G   + RL + G   +  V  SI  L +L  L L GC    
Sbjct: 879  RVDLSNSRC--LVETPNFTGSQIIERLDFTGCINLSYVHPSIGLLKELAFLSLEGC---- 932

Query: 530  RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
                     R+LV+L+L G             +  LK ++       E+ S F  +  LE
Sbjct: 933  ---------RNLVSLVLDG--------HPASNLYSLKVLHLSGCSKLEIVSDFRGVSNLE 975

Query: 590  VLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
             L ++ C  L  +  +IG L  L ++     ++++ +P S+     L +LD   C  LES
Sbjct: 976  YLDIDQCVSLSTINQSIGDLTQLKFLSFRECTSLASIPESINSMTSLETLDLCGCFKLES 1035

Query: 649  FPRTFLLG---------------------LSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
             P   LLG                     ++++  L +S   +  +P  I  L  LE L 
Sbjct: 1036 LP---LLGNTSVSEINVDLSNDELISSYYMNSLIFLDLSFCNLSRVPNAIGELRHLERLN 1092

Query: 688  LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC 726
            L GNN  SLP+ +  +S L +++L   + LQSLPEL LC
Sbjct: 1093 LEGNNLISLPSSVGGLSSLAYLNLAHCSRLQSLPELQLC 1131



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 184/452 (40%), Gaps = 80/452 (17%)

Query: 575  ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
            I  L    +NLP L+ + + +   L   P+  GS             +S +  S+ L   
Sbjct: 864  IKRLWDGHKNLPCLKRVDLSNSRCLVETPNFTGSQIIERLDFTGCINLSYVHPSIGLLKE 923

Query: 635  LRSLDSSHCKGLESF-----PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS 689
            L  L    C+ L S      P +    L ++ +LH+S  +  EI  +   +S+LE  YL 
Sbjct: 924  LAFLSLEGCRNLVSLVLDGHPAS---NLYSLKVLHLSGCSKLEIVSDFRGVSNLE--YLD 978

Query: 690  GNNFESLPAI---IKQMSQLRFIHLEDFNMLQSLPEL---PLCLKYLHLIDCKMLQSLPV 743
             +   SL  I   I  ++QL+F+   +   L S+PE       L+ L L  C  L+SLP+
Sbjct: 979  IDQCVSLSTINQSIGDLTQLKFLSFRECTSLASIPESINSMTSLETLDLCGCFKLESLPL 1038

Query: 744  L-------------------PFCLESL---DLTGCNMLR---SLPELPLCLQYLNLEDCN 778
            L                    + + SL   DL+ CN+ R   ++ EL   L+ LNLE  N
Sbjct: 1039 LGNTSVSEINVDLSNDELISSYYMNSLIFLDLSFCNLSRVPNAIGELRH-LERLNLEGNN 1097

Query: 779  MLRSLPELP---LCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPES 835
            ++ SLP        L  L + +C+RLQSLPE+ LC          K+   S        +
Sbjct: 1098 LI-SLPSSVGGLSSLAYLNLAHCSRLQSLPELQLCATSSYGGRYFKMVSGS-------HN 1149

Query: 836  LKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLI 895
             +S    F   NC  L     +  LA   L+         R G +              I
Sbjct: 1150 HRSGLYIF---NCPHLKMTGQSLDLAVLWLKNLVKNPCHFRCGLD--------------I 1192

Query: 896  VLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL-----DSKKVDSDCFRYF 950
            V+P   IP WF +Q +G+S  +++  ++   N +GFAFC         S    S      
Sbjct: 1193 VVPSDTIPLWFDHQFAGNSR-VKITDYNKFDNWLGFAFCVAFVENCCPSTPASSQLPYPL 1251

Query: 951  YVSFQFDLEIKTLSETKHVDL----GYNSRYI 978
            Y+SF+ +   +T      +DL    G N+ YI
Sbjct: 1252 YLSFESEQTEETFDIPIQLDLINVDGSNAEYI 1283


>gi|356560719|ref|XP_003548636.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1139

 Score =  296 bits (758), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 225/718 (31%), Positives = 343/718 (47%), Gaps = 114/718 (15%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSET-AGGLEHLQKQ 60
           + S  V IVGIWGMGG+GKTT AKAI+++    F G CF+ D+R   ET   G  HLQ+Q
Sbjct: 206 NQSTKVCIVGIWGMGGLGKTTTAKAIYNRIHRRFTGRCFIEDIREVCETDRRGHVHLQEQ 265

Query: 61  MLSTTLSEKLEVAGPNIPHFTKE-RVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           +LS  L  K+ +    I     E ++   K LIVLDDVNE GQLK L G    FGQGS +
Sbjct: 266 LLSDVLKTKVNIKSVGIGRAMMESKLSGTKALIVLDDVNEFGQLKVLCGNRKWFGQGSIV 325

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TTRD R+L K + +   +Y++  ++  ++ E F   AF E    E+ +  +R+VV+Y 
Sbjct: 326 IITTRDVRLLHKLKVD--FVYKMEEMDENKSLELFSWHAFGEAKPIEEFDELARNVVAYC 383

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIF 238
            G PL LEV+GS L  + K  W  VL  L  I   ++ +    L+IS+N L   + K IF
Sbjct: 384 GGLPLALEVIGSYLSERTKKEWESVLSKLKIIPNDQVQEK---LRISYNGLCDHMEKDIF 440

Query: 239 LDIACFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQI 294
           LD+ CFF G+D+ +V  IL+     +D+ + +L+++SLV ++  N L MH +L++MGR+I
Sbjct: 441 LDVCCFFIGKDRAYVTEILNGCGLHADIGITVLMERSLVKVAKNNKLGMHPLLRDMGREI 500

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           +R+ S K+PGKRSRLW  ++   VL  N GT AIEG+ L L           AF  M  L
Sbjct: 501 IRESSTKKPGKRSRLWFHEDSLNVLTKNTGTKAIEGLALKLHSSSRDCFKAYAFKTMKQL 560

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL                      L    VQL     YLPK LR+++W  +PL+ +P NF
Sbjct: 561 RL----------------------LQLEHVQLTGDYGYLPKHLRWIYWKGFPLKYMPKNF 598

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
               ++ ++L+ S +   W+      P  +   K L                        
Sbjct: 599 YLGGVIAIDLKDSNLRLVWKD-----PQVLPWLKIL------------------------ 629

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
             N S+   L E P  S              ++PS       LE L L+ C  L ++  S
Sbjct: 630 --NLSHSKYLTETPDFS--------------KLPS-------LEKLILKDCPSLCKVHQS 666

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
              L++L+ + L  C +L + P  + K++ LK +                        + 
Sbjct: 667 IGDLQNLLWINLKDCTSLSNLPREIYKLKSLKTL------------------------II 702

Query: 595 DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
             S++D L ++I  +E L  ++A  +A+ Q+P S+     L+S+      G E   R   
Sbjct: 703 SGSRIDKLEEDIVQMESLTTLIAKDTAVKQVPFSIV---RLKSIGYISLCGYEGLSRNVF 759

Query: 655 LGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE 712
             +     +  +   +  I       SSL  + +  NN   L  I+  +S LR + ++
Sbjct: 760 PSI-IWSWMSPTMNPLSRIRSFSGTSSSLISMDMHNNNLGDLAPILSSLSNLRSVSVQ 816



 Score = 44.7 bits (104), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 85/387 (21%), Positives = 142/387 (36%), Gaps = 89/387 (22%)

Query: 556 PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
           P++L  ++ L   +S    +TE P  F  LP LE L ++DC  L  +  +IG L+ L +I
Sbjct: 620 PQVLPWLKILNLSHSKY--LTETPD-FSKLPSLEKLILKDCPSLCKVHQSIGDLQNLLWI 676

Query: 616 LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
                    L    +LSN+                                       P+
Sbjct: 677 --------NLKDCTSLSNL---------------------------------------PR 689

Query: 676 EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
           EI  L SL+ L +SG+  + L   I QM  L  +  +D   ++ +P   + LK +  I  
Sbjct: 690 EIYKLKSLKTLIISGSRIDKLEEDIVQMESLTTLIAKD-TAVKQVPFSIVRLKSIGYISL 748

Query: 736 KMLQSL-----PVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCL 790
              + L     P + +   S  +   + +RS       L  +++ + N+    P L    
Sbjct: 749 CGYEGLSRNVFPSIIWSWMSPTMNPLSRIRSFSGTSSSLISMDMHNNNLGDLAPILSSLS 808

Query: 791 QLLTVR-NCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCL 849
            L +V   C+R   L E L  +Q+ +     +L   S   Q     L+S      F  C 
Sbjct: 809 NLRSVSVQCHRGFQLSEELRTIQDEEYGSYRELEIASYVSQIPKHYLRSP-----FQQCN 863

Query: 850 KLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQ 909
            +N +AN       LL ++ +A + +                 S + LP    P W ++ 
Sbjct: 864 YINDQAN-------LLMVQGLATSEV-----------------SDVFLPSDNYPYWLAHM 899

Query: 910 SSGSSICIQLPPHSSCRNLIGFAFCAV 936
             G S+   +P     +   G   C V
Sbjct: 900 GDGHSVYFTVPEDFHMK---GMTLCVV 923


>gi|297790458|ref|XP_002863119.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308943|gb|EFH39378.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1121

 Score =  296 bits (758), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 281/946 (29%), Positives = 435/946 (45%), Gaps = 200/946 (21%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN-----SETAGGLEHLQ 58
            SD V+++GIWG  GIGKTT+A+ ++++ S  F+ S F+  +        S+       LQ
Sbjct: 255  SDEVRMIGIWGPSGIGKTTIARVVYNKLSSSFQLSVFMESIEAKYTRPCSDDYSAKLQLQ 314

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            +Q +S   ++    +G  I H    ++R++  K+L+VLD V++  QL  +  E   FG G
Sbjct: 315  QQFMSQITNQ----SGMKISHLGVVQDRLKDKKVLVVLDGVDKSMQLDAMAKETWWFGPG 370

Query: 117  SRIVVTTRDKRVLEKFRGEE-KKIYRVNGLEFEEAFEHFCNFAFKEN---HCPEDLNWHS 172
            S+I++T +D+++   FR      IY+V     +EA +  C +AF +    H  E+L W  
Sbjct: 371  SQIIITAQDRKI---FREHGINHIYKVGFPSTDEALQILCTYAFGQKSPKHGFEELAWE- 426

Query: 173  RSVVSYTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT 231
               V++  G  PL L V+GS      K  W K L    R+  S   DI  ILK S++ L 
Sbjct: 427  ---VTHLAGELPLGLRVMGSYFRGMSKLEWTKALP---RLRSSLDADILSILKFSYDALD 480

Query: 232  PRVKSIFLDIACFFE----GEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDIL 287
               K +FL IACFF     G  ++++A    D  S  L+ L +KSL+S++   + MHD+L
Sbjct: 481  DEDKYLFLHIACFFNYKRIGRVEEYLAETFLDV-SHRLNGLAEKSLISMNDGVIIMHDLL 539

Query: 288  QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHN-KGTDAIEGIFLDL--SKIK-GINL 343
             ++G  IVR++S +EPG+R  L D +EI  VL  +  G+ ++ GI  +   ++IK  ++L
Sbjct: 540  VKLGIDIVRKQSLREPGQRLFLVDAREICEVLNLDANGSRSVIGINYNFGGNRIKEKLHL 599

Query: 344  DPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWD 403
              RAF  MSNL+  +                   + + + + LP+GL+Y+ +KLR L W 
Sbjct: 600  SERAFQGMSNLQFLRV------------------KGNNNTIHLPHGLEYISRKLRLLDWT 641

Query: 404  TYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSL-- 461
             +P+  LP  F    LVEL++RCSK+E+ WEG K      + N K +   S    + L  
Sbjct: 642  YFPMTCLPPIFNTDFLVELDMRCSKLEKLWEGIKP-----LPNLKRMDLSSSLLLKELPD 696

Query: 462  RSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR---LYLGQ-SAIEEVPSSIECLTDL 517
             S  +NL      T+N  YC +L+  P   G  T    LYLG  S++ E+PSSI  L +L
Sbjct: 697  LSTATNLR-----TLNLRYCSSLMNLPSSIGNATNLELLYLGGCSSLVELPSSIGNLINL 751

Query: 518  EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
            + LDL     L  +        S+  LI L  LNL                 S  + + E
Sbjct: 752  KELDLSSLSCLVELPF------SIGNLINLKVLNL-----------------SSLSCLVE 788

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLR 636
            LP S  N   LEVL +  CS L  LP +IG+L+ L  + L   S +  LP+++ L + L 
Sbjct: 789  LPFSIGNATNLEVLNLRQCSNLVKLPFSIGNLQKLQTLNLRGCSKLEVLPANIKLGS-LW 847

Query: 637  SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL 696
            SLD + C  L+ FP                     EI   + +      ++L G   E +
Sbjct: 848  SLDLTDCILLKRFP---------------------EISTNVGF------IWLIGTTIEEV 880

Query: 697  PAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP-VLPFC-LESLDLT 754
            P+ IK  S+   +H+     L++ P     +  L + + ++ +  P V  F  L  L L 
Sbjct: 881  PSSIKSWSRPNEVHMSYSENLKNFPHAFDIITRLQVTNTEIQEVPPWVNKFSRLTVLKLK 940

Query: 755  GCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL 814
            GC  L SLP++P  +  ++ EDC                                 L+ L
Sbjct: 941  GCKKLVSLPQIPDSISDIDAEDCE-------------------------------SLERL 969

Query: 815  DASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIAS 874
            D S       H+P+            I  +F  C KLN +A + I+              
Sbjct: 970  DCSF------HNPN------------IWLKFAKCFKLNQEARDLIIQTP----------- 1000

Query: 875  LRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQS-SGSSICIQL 919
                                 VLPG E+P +F++QS +G S+ I+L
Sbjct: 1001 ----------------TSKSAVLPGREVPAYFTHQSTTGGSLTIKL 1030


>gi|357456937|ref|XP_003598749.1| Resistance protein [Medicago truncatula]
 gi|355487797|gb|AES69000.1| Resistance protein [Medicago truncatula]
          Length = 1075

 Score =  296 bits (758), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 224/615 (36%), Positives = 314/615 (51%), Gaps = 74/615 (12%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S + V +VGI+G+GGIGK+T+A+A+ +  + +FEG CF+ D+R  + T   L  LQ+ +L
Sbjct: 237 SDERVNMVGIYGIGGIGKSTIARALHNLSADQFEGVCFLGDIRERA-TNHDLAQLQETLL 295

Query: 63  STTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           S    EK    G      +  K R++R K+L++LD+V++V QL+ L+G  D FG GS+I+
Sbjct: 296 SEVFGEKGIKVGDVYKGMSMIKARLKRKKVLLILDNVDKVQQLRALVGAPDWFGFGSKII 355

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK +L        K+Y V  L+ E+A E F   AFK+          ++  VSY +
Sbjct: 356 ITTRDKHLLATH--GIVKVYEVRQLKDEKALELFSWHAFKDKKNYPGYVDIAKRAVSYCE 413

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL LEV+GS L  K        L    R+   +IH I   LKIS++ L    K IFLD
Sbjct: 414 GLPLALEVIGSQLFGKSLVVCKSSLDKYERVLPKDIHAI---LKISYDDLEEDEKGIFLD 470

Query: 241 IACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVR 296
           IACFF   +  +V  IL        D +  L DKSL+ I  N  + MHD++Q+MGR+IVR
Sbjct: 471 IACFFNSSEIGYVKEILYLHGFHAEDGIQQLTDKSLMKIDTNGCVRMHDLIQDMGREIVR 530

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
           QES  EPG+RSRLW   +I  VL+ NKGTD IE I  D  + + +    +AF  M NL++
Sbjct: 531 QESTLEPGRRSRLWFSDDIVHVLEENKGTDTIEVIIADFCEARKVKWCGKAFGQMKNLKI 590

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
                                 L     Q       LP  LR L W  Y   +LPS+F P
Sbjct: 591 ----------------------LIIGNAQFSRDPQVLPSSLRLLDWHGYQSSSLPSDFNP 628

Query: 417 KNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS-----NLHFV 471
           KNL+ LNL  S +++           S++ F+ L  L F+ C+ L   PS     NL  +
Sbjct: 629 KNLIILNLAESCLKR---------VESLKVFETLIFLDFQDCKFLTEIPSLSRVPNLGSL 679

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
           C       YC NL                      +  S+  L  L +L  +GC +L R+
Sbjct: 680 C-----LDYCTNLF--------------------RIHESVGFLAKLVLLSAQGCTQLDRL 714

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
                 L SL TL L GC  LE FPE+L  ME++K +Y D T + ELP +  NL GL+ L
Sbjct: 715 VPCM-NLPSLETLDLRGCSRLESFPEVLGVMENIKDVYLDETNLYELPFTIGNLVGLQSL 773

Query: 592 FVEDCSKLDNLPDNI 606
           F+  C +   +P  +
Sbjct: 774 FLRRCKRTIQIPSYV 788


>gi|6721163|gb|AAF26791.1|AC016829_15 putative disease resistance protein [Arabidopsis thaliana]
          Length = 896

 Score =  296 bits (758), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 216/657 (32%), Positives = 340/657 (51%), Gaps = 32/657 (4%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVR-GNSETAGGLEHLQK-QM 61
           SD ++ +GIWG  G+GKTT+A+++++Q S +F+ S F+  ++   +  A   ++ +K Q+
Sbjct: 255 SDEMKTIGIWGPPGVGKTTIARSLYNQHSDKFQLSVFMESIKTAYTIPACSDDYYEKLQL 314

Query: 62  LSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
               LS+        IPH    +ER+   K+L+V+DDVN+  Q+  L  E D  G GSRI
Sbjct: 315 QQRFLSQITNQENVQIPHLGVAQERLNDKKVLVVIDDVNQSVQVDALAKENDWLGPGSRI 374

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TT+D+ +L     E   IY V+   +EEA + FC  AF +    +     ++ V + +
Sbjct: 375 IITTQDRGILRAHGIEH--IYEVDYPNYEEALQIFCMHAFGQKSPYDGFEELAQQVTTLS 432

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
              PL L+V+GS      K  W   L  +    + +I  I   LK+S++ L    KS+FL
Sbjct: 433 GRLPLGLKVMGSYFRGMTKQEWTMALPRVRTHLDGKIESI---LKLSYDALCDVDKSLFL 489

Query: 240 DIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
            +AC F  +D + V   L    SD+   L +L +KSL+ +    + MH +L ++GR+IVR
Sbjct: 490 HLACSFHNDDTELVEQQLGKKFSDLRQGLHVLAEKSLIHMDLRLIRMHVLLAQLGREIVR 549

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSNLR 355
           ++S  EPG+R  L D  +I  VL  + G+ ++ GI  D + + K +++  +AF  MSNL+
Sbjct: 550 KQSIHEPGQRQFLVDATDIREVLTDDTGSRSVIGIDFDFNTMEKELDISEKAFRGMSNLQ 609

Query: 356 LFKFYVPKF--YEIEKLPSMSTEEQLSY-SKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
             + Y   F  + +           L Y SK+  P GLDYLP KLR LHW  +P+ +LPS
Sbjct: 610 FIRIYGDLFSRHGVYYFGGRGHRVSLDYDSKLHFPRGLDYLPGKLRLLHWQQFPMTSLPS 669

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
            F  + LV+L +  SK+E+ WEG        IQ  + L  L     ++L+  P       
Sbjct: 670 EFHAEFLVKLCMPYSKLEKLWEG--------IQPLRNLEWLDLTCSRNLKELPDLSTATN 721

Query: 473 PVTINFSYCVNLIEFPQISGKVT---RLYLGQS-AIEEVPSSIECLTDLEVLDLRGCKRL 528
              ++   C +L++ P   G+ T   ++ L +  ++ E+PSS   LT+L+ LDLR C  L
Sbjct: 722 LQRLSIERCSSLVKLPSSIGEATNLKKINLRECLSLVELPSSFGNLTNLQELDLRECSSL 781

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR--TPITELPSSFENLP 586
             + TSF  L ++ +L    C +L   P     + +L R+   R  + + ELPSSF NL 
Sbjct: 782 VELPTSFGNLANVESLEFYECSSLVKLPSTFGNLTNL-RVLGLRECSSMVELPSSFGNLT 840

Query: 587 GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
            L+VL +  CS L  LP +  +L  L   L      S LPSS      L+ L    C
Sbjct: 841 NLQVLNLRKCSTLVELPSSFVNLTNLEN-LDLRDCSSLLPSSFGNVTYLKRLKFYKC 896



 Score = 46.6 bits (109), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 34/238 (14%)

Query: 554 HFPEILEKME-HLKRIYSDRTPITELPSSF----------------------ENLPGLEV 590
           HFP  L+ +   L+ ++  + P+T LPS F                      + L  LE 
Sbjct: 642 HFPRGLDYLPGKLRLLHWQQFPMTSLPSEFHAEFLVKLCMPYSKLEKLWEGIQPLRNLEW 701

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           L +     L  LPD   +       +   S++ +LPSS+  +  L+ ++   C  L   P
Sbjct: 702 LDLTCSRNLKELPDLSTATNLQRLSIERCSSLVKLPSSIGEATNLKKINLRECLSLVELP 761

Query: 651 RTF--LLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL-YLSGNNFESLPAIIKQMSQLR 707
            +F  L  L  + L   S  ++ E+P     L+++E L +   ++   LP+    ++ LR
Sbjct: 762 SSFGNLTNLQELDLRECS--SLVELPTSFGNLANVESLEFYECSSLVKLPSTFGNLTNLR 819

Query: 708 FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC------LESLDLTGCNML 759
            + L + + +  LP     L  L +++ +   +L  LP        LE+LDL  C+ L
Sbjct: 820 VLGLRECSSMVELPSSFGNLTNLQVLNLRKCSTLVELPSSFVNLTNLENLDLRDCSSL 877


>gi|15238695|ref|NP_197298.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9757889|dbj|BAB08396.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|91806874|gb|ABE66164.1| disease resistance protein [Arabidopsis thaliana]
 gi|332005108|gb|AED92491.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 780

 Score =  296 bits (757), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 206/583 (35%), Positives = 311/583 (53%), Gaps = 77/583 (13%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSH----EFEGSCFVSDVRGN--SETAGGLE-- 55
           S+ V+++G+WG  GIGKTT+ + +++Q S     +F+   F+ +V+G+   +   G    
Sbjct: 208 SNEVKMIGVWGPAGIGKTTITRILYNQLSSSNDDDFQLFIFMENVKGSYRRKEIDGYSMK 267

Query: 56  -HLQKQMLS-TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF 113
            HL+++ LS  T   K++V+   +    +ER++  K LIVLDDV+E+ QL+ L  +    
Sbjct: 268 LHLRERFLSEITTQRKIKVSHLGV---AQERLKNQKALIVLDDVDELEQLRALADQTQWV 324

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSR 173
           G G+RI+VTT D+++L K  G    +Y V+    +EA +  C  AF +N  PE  N  + 
Sbjct: 325 GNGTRILVTTEDRQLL-KAHGI-THVYEVDYPSRDEALKILCQCAFGKNSAPEGYNDLAV 382

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            VV      PL L VLG+SL    K  W   ++ L R+  S    I  +L++ +  L  +
Sbjct: 383 EVVELAGYLPLGLSVLGASLRGMSKKEW---INALPRLRTSLNGKIEKLLRVCYEGLDEK 439

Query: 234 VKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGN-FLNMHDILQE 289
            K+IFL IAC F G++ D V  +L  S  DV   L +L+D+SL+ I  + ++ MH +LQ+
Sbjct: 440 DKAIFLHIACLFNGKNVDRVKLLLAKSALDVEFGLKVLVDRSLIHIDADGYIVMHCLLQQ 499

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAF 348
           +G++I R +   EPGKR  L D  EIS VL    GT+ + GI LD+S+I+  + +  +AF
Sbjct: 500 LGKEITRGQCLDEPGKRKFLVDSLEISDVLADETGTETVLGISLDMSEIEDQVYVSEKAF 559

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M NL+    Y       +  P  +        K+ LP+GLDYLP+KLR LHWD+YP +
Sbjct: 560 EKMPNLQFLWLY-------KNFPDEAV-------KLYLPHGLDYLPRKLRLLHWDSYPKK 605

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEG------------------------------EK- 437
            LPS F+P+ LVEL +R SK+E+ WEG                              EK 
Sbjct: 606 CLPSKFRPEFLVELTMRDSKLEKLWEGIQPLKSLKRMDLSASTKIKDIPNLSRATNLEKL 665

Query: 438 --------ACVPSS-IQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP 488
                     VPSS +QN   L  L    C  L+S P N++      +N   C  L  FP
Sbjct: 666 YLRFCKNLVIVPSSCLQNLHKLKVLDMSCCIKLKSLPDNINLKSLSVLNMRGCSKLNNFP 725

Query: 489 QISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
            IS ++  + LG++AIE+VPS I+  + L  L++ GCK LK +
Sbjct: 726 LISTQIQFMSLGETAIEKVPSVIKLCSRLVSLEMAGCKNLKTL 768



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 35/216 (16%)

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAIS 623
           L+ ++ D  P   LPS F   P   V      SKL+ L + I  L+ L  + L+A++ I 
Sbjct: 594 LRLLHWDSYPKKCLPSKFR--PEFLVELTMRDSKLEKLWEGIQPLKSLKRMDLSASTKIK 651

Query: 624 QLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD-YAVREIPQEIAYLSS 682
            +P+    +N L  L    CK L   P + L  L  + +L +S    ++ +P  I  L S
Sbjct: 652 DIPNLSRATN-LEKLYLRFCKNLVIVPSSCLQNLHKLKVLDMSCCIKLKSLPDNIN-LKS 709

Query: 683 LEILYLSG----NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
           L +L + G    NNF   P I    +Q++F+ L +  + +    + LC +          
Sbjct: 710 LSVLNMRGCSKLNNF---PLI---STQIQFMSLGETAIEKVPSVIKLCSR---------- 753

Query: 739 QSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNL 774
                    L SL++ GC  L++LP LP  ++ +++
Sbjct: 754 ---------LVSLEMAGCKNLKTLPYLPASIEIVDI 780



 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 43/177 (24%)

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           +  L +  S +E++   I+ L  L+ +DL    ++K I  +  +  +L  L L  C NL 
Sbjct: 616 LVELTMRDSKLEKLWEGIQPLKSLKRMDLSASTKIKDIP-NLSRATNLEKLYLRFCKNLV 674

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG--SLEY 611
             P                       S  +NL  L+VL +  C KL +LPDNI   SL  
Sbjct: 675 IVP----------------------SSCLQNLHKLKVLDMSCCIKLKSLPDNINLKSLSV 712

Query: 612 L------------------YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           L                   ++    +AI ++PS + L + L SL+ + CK L++ P
Sbjct: 713 LNMRGCSKLNNFPLISTQIQFMSLGETAIEKVPSVIKLCSRLVSLEMAGCKNLKTLP 769


>gi|359493485|ref|XP_003634611.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 824

 Score =  296 bits (757), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 230/625 (36%), Positives = 328/625 (52%), Gaps = 77/625 (12%)

Query: 157 FAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKS--HWGKVLHDLNRICES 214
           +AF+  H  ED        V YT   PL L+VLGS  CL RKS   W   L  LN+    
Sbjct: 1   YAFRYKHPTEDFKQLCHHTVDYTGSLPLALKVLGS--CLYRKSIHEWKSELDKLNQFPNK 58

Query: 215 EIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDS-ESDVLDILIDKSL 273
           E+    ++LK SF+ L    K++FLDIA F++GEDKDFV  +L++   +  +  L+DKSL
Sbjct: 59  EV---LNVLKTSFDGLDDNEKNMFLDIAFFYKGEDKDFVIKVLENFFPASEIGNLVDKSL 115

Query: 274 VSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFL 333
           ++IS N L MHD+LQEMG +IVRQES K+PGKRSRL   ++I  VL  NKGT+A+EG+  
Sbjct: 116 ITISDNKLYMHDLLQEMGWEIVRQESIKDPGKRSRLQVHEDIHDVLTTNKGTEAVEGMVF 175

Query: 334 DLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS-----MSTEEQLSY------- 381
           DLS  K +NL   AF  M+ LRL +FY  +FY   +  S      ST +   +       
Sbjct: 176 DLSASKELNLSVDAFAKMNKLRLLRFYNFQFYGRSEYLSKKELIASTHDAWRWMGYDNSP 235

Query: 382 ---SKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA 438
              SK+ L     +    LR LHW  YPL++LPSNF P+ LVELN+  S ++Q WEG+KA
Sbjct: 236 YNDSKLHLSIDFKFPSNNLRSLHWHGYPLKSLPSNFHPEKLVELNMCYSLLKQLWEGKKA 295

Query: 439 CVPSSIQNFKYLSALS---------------FKGCQSL-RSFPSNLHFVCPVTINFSYCV 482
                     +   L+                 GC SL +  PS       +  N   C 
Sbjct: 296 FKKLKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIFPNLEGCS 355

Query: 483 NLIEFPQISG----KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
            L +FP++       ++R+    +AI E+PSSI  L  L +L+LR C++L  +  S C+L
Sbjct: 356 KLEKFPEVVQGNLENLSRISFEGTAIRELPSSIGSLNRLVLLNLRNCEKLASLPQSICEL 415

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
            SL TL L GC  L+  P+ L +++ L  +  D T I E+ SS   L  LE L +  C  
Sbjct: 416 ISLQTLTLSGCSKLKKLPDDLGRLQCLAELNVDGTGIKEVTSSINLLTNLEALSLAGCKG 475

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
             +   N+ S        ++ +A  QLP                          FL GL 
Sbjct: 476 GGSKSRNLISFR------SSPAAPLQLP--------------------------FLSGLY 503

Query: 659 AMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM 716
           ++  L++SD  + E  +P +++ LSSLE LYL  N+F +LPA + ++S+L+ + LE    
Sbjct: 504 SLKSLNLSDCNLLEGALPTDLSSLSSLENLYLDKNSFITLPASLSRLSRLKRLTLEHCKS 563

Query: 717 LQSLPELPLCLKYLHLIDCKMLQSL 741
           L+SLPELP  ++YL+   C  L++L
Sbjct: 564 LRSLPELPSSIEYLNAHSCASLETL 588


>gi|238481454|ref|NP_198822.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007123|gb|AED94506.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 968

 Score =  296 bits (757), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 236/785 (30%), Positives = 368/785 (46%), Gaps = 125/785 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFV----------SDVRGNSETAGG 53
           S  V++VGIWG  GIGKTT+A+A+F + S  F  S ++          S  R N +    
Sbjct: 9   SKEVRMVGIWGPSGIGKTTIARALFARLSRHFHCSVYIDRAFVSKSMASYSRANPDDYNM 68

Query: 54  LEHLQKQMLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
             HLQ+  LST L ++       I H     ER++  K+L+ +DD+++   L  L G++ 
Sbjct: 69  KLHLQETFLSTILGKQ----NIKIDHLGALGERLKHQKVLLFIDDLDQQVVLNALAGQIQ 124

Query: 112 QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH 171
            FG GSRI+V T DK +L     E   IY+V     E A E  C +AF++N  P+     
Sbjct: 125 WFGSGSRIIVVTNDKHLLISHGIEN--IYQVCLPSKELALEMLCRYAFRQNTPPDGFKKL 182

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL- 230
           +  VV +    PL L VLGS L  + K +W  +L  L +  + +I      L++ ++ L 
Sbjct: 183 AVEVVRHAGILPLGLNVLGSYLRGRNKRYWMDMLPRLRKGLDGKIQKA---LRVGYDGLD 239

Query: 231 TPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDIL 287
             + ++IF  IAC F  E  + +  +L DS+ +    L+ L+DKSLV++  N + MH +L
Sbjct: 240 NKKDEAIFRHIACLFNFEKVNDIRLLLADSDLNFNIGLENLVDKSLVNVRSNIVEMHCLL 299

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPR 346
           QEMGR+IVR +S  E G+R  L D ++I  VL  N GT  + GI LD+ +I   +N+  +
Sbjct: 300 QEMGREIVRAQSN-EAGEREFLMDTEDICDVLDDNIGTKKMLGISLDVDEIDHELNVHEK 358

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           AF  M NLR    Y       +K+            ++ LP   DYLP KL+ L WD YP
Sbjct: 359 AFQGMRNLRFLNIYTKALMSGQKI------------RLHLPENFDYLPPKLKLLCWDKYP 406

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEGE------------------------------ 436
           +R LPS+F+P+NLV+L ++ S++E+ WEG                               
Sbjct: 407 MRCLPSSFRPENLVKLKMQESELEKLWEGVGSLTCLKDMDLEKSKNLKEIPDLSMATNLK 466

Query: 437 ----KAC-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEF 487
               K C     + SSIQN   L+ L+ +GC +L + P+ ++      ++   C  L  F
Sbjct: 467 TLNLKYCSSLVKISSSIQNLNKLTKLNMEGCTNLETLPAGINLKSLHRLDLRGCSRLRMF 526

Query: 488 PQISGKVTRLYLGQSAIEEVPSSIEC--LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
           P IS  ++ L+L +++IEE PS++    L DL +  +   K  + +    C ++ L    
Sbjct: 527 PDISNNISVLFLDKTSIEEFPSNLHLKKLFDLSMQQMNSEKLWEGVQPLTCLMKMLS--- 583

Query: 546 LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
                     P + +    L    SD   + ELP   +NL  L  L +  C  L++LP  
Sbjct: 584 ----------PPLAKNFNTL--YLSDIPSLVELPCGIQNLKKLMELSIRRCKNLESLPTG 631

Query: 606 IGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHI 665
             + +YL Y                       LD S C  L SFP       S +  L +
Sbjct: 632 -ANFKYLDY-----------------------LDLSGCSKLRSFPDIS----STISCLCL 663

Query: 666 SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
           +   + E+P  I     + + YL+      L  +   + +L+ +   DF+   +L E+  
Sbjct: 664 NRTGIEEVPSWIENF--VRLTYLTMLECNKLKYVSLNIFKLKHLDKADFSDCGTLTEVSW 721

Query: 726 CLKYL 730
           C K +
Sbjct: 722 CNKTI 726


>gi|15237516|ref|NP_198907.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177970|dbj|BAB11353.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007232|gb|AED94615.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1104

 Score =  295 bits (756), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 216/654 (33%), Positives = 328/654 (50%), Gaps = 106/654 (16%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           SD V+++GIWG  GIGKTT+A+A+F+Q S  F  SCF+  +  N   +     LQ ++LS
Sbjct: 203 SDDVKMIGIWGPAGIGKTTIARALFNQLSTGFRLSCFMGTIDVNDYDSKLC--LQNKLLS 260

Query: 64  TTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             L++K       I H    +E +   ++LIVLDDV+++ QL+ L  E   FG GSRI+V
Sbjct: 261 KILNQK----DMKIHHLGAIEEWLHNQRVLIVLDDVDDLEQLEVLAKESSWFGHGSRIIV 316

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           +  D+++L+     +  IY V+    EEA E  C  AFK+N   +     ++ VV     
Sbjct: 317 SLNDRKILKAHGIND--IYDVDFPSEEEALEILCLSAFKQNSPQDGFEEVAKRVVELCGK 374

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L V+GSS   + +  W   L+ +    + +I ++   L++ ++KL+ R +S+FL I
Sbjct: 375 LPLGLRVVGSSFYGESEDEWRIQLYGIETNLDRKIENV---LRVGYDKLSERHQSLFLHI 431

Query: 242 ACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
           ACFF  +  D+V ++L DS  DV   L  L  KSLVS +G ++ MH +LQ++GRQ+V Q+
Sbjct: 432 ACFFNHKSVDYVTTMLADSTLDVENGLKTLAAKSLVSTNG-WITMHCLLQQLGRQVVVQQ 490

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
            +  PGKR  L + KEI  VL +  GT+++ GI  D+SKI+ +++  RAF  M NL+   
Sbjct: 491 GD--PGKRQFLVEAKEIRDVLANETGTESVIGISFDISKIETLSISKRAFNRMRNLKFLN 548

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
           FY                       V L   ++YLP+ LR L+W +YP ++LP  FKP+ 
Sbjct: 549 FY--------------------NGSVSLLEDMEYLPR-LRLLYWGSYPRKSLPLTFKPEC 587

Query: 419 LVELNLRCSKVEQPWEG------------------------EKAC--------------- 439
           LVEL +  SK+E+ W G                         KA                
Sbjct: 588 LVELYMGFSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPNLSKATNLKTLTLTGCESLVE 647

Query: 440 VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
           +PSSI N + L  L   GC  L+  P+N++      +N S C  L  FP IS  + RLY+
Sbjct: 648 IPSSIWNLQKLEMLYASGCIKLQVIPTNINLASLEEVNMSNCSRLRSFPDISSNIKRLYV 707

Query: 500 GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
             + I+E P+S                    I   +C+L      + +G  +L+    + 
Sbjct: 708 AGTMIKEFPAS--------------------IVGHWCRL----DFLQIGSRSLKRLTHVP 743

Query: 560 EKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
           E + HL    SD   I  +P     LP L  L VE+C+KL ++  +  SL  L+
Sbjct: 744 ESVTHLDLRNSD---IKMIPDCVIGLPHLVSLLVENCTKLVSIQGHSPSLVTLF 794



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 156/376 (41%), Gaps = 77/376 (20%)

Query: 558 ILEKMEHLKRI---YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
           +LE ME+L R+   Y    P   LP +F+  P   V      SKL+ L   I  L  L  
Sbjct: 556 LLEDMEYLPRLRLLYWGSYPRKSLPLTFK--PECLVELYMGFSKLEKLWGGIQPLTNLKK 613

Query: 615 I-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
           I L  +S + ++P+    +N L++L  + C+ L                         EI
Sbjct: 614 INLGYSSNLKEIPNLSKATN-LKTLTLTGCESL------------------------VEI 648

Query: 674 PQEIAYLSSLEILYLSGN-NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
           P  I  L  LE+LY SG    + +P  I  ++ L  +++ + + L+S P++   +K L+ 
Sbjct: 649 PSSIWNLQKLEMLYASGCIKLQVIPTNI-NLASLEEVNMSNCSRLRSFPDISSNIKRLY- 706

Query: 733 IDCKMLQSLP---VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPE---- 785
           +   M++  P   V  +C       G   L+ L  +P  + +L+L + + ++ +P+    
Sbjct: 707 VAGTMIKEFPASIVGHWCRLDFLQIGSRSLKRLTHVPESVTHLDLRNSD-IKMIPDCVIG 765

Query: 786 LPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEF 845
           LP  + LL V NC +L S+       Q    S++   + H   L+    S         F
Sbjct: 766 LPHLVSLL-VENCTKLVSI-------QGHSPSLVTLFADHCISLKSVCCSFHGPISKLMF 817

Query: 846 TNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDW 905
            NCLKL+ ++   I+  S                               I LPG EIP  
Sbjct: 818 YNCLKLDKESKRGIIQQS---------------------------GNKSICLPGKEIPAE 850

Query: 906 FSNQSSGSSICIQLPP 921
           F++Q+ G+ I I L P
Sbjct: 851 FTHQTIGNLITISLAP 866


>gi|357468645|ref|XP_003604607.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
 gi|355505662|gb|AES86804.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
          Length = 936

 Score =  295 bits (756), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 203/592 (34%), Positives = 311/592 (52%), Gaps = 74/592 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           ++ V ++G+WGMGGIGKTT+AKAI+++    FEG  F++++R       G  +LQ+Q++ 
Sbjct: 233 TNDVLLLGMWGMGGIGKTTVAKAIYNKIGRNFEGRSFIANIREVWGKDCGQVNLQEQLMY 292

Query: 64  TTLSE---KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
               E   K++     I      R+   ++L+VLDDVN++ QL  L G    F  GSRI+
Sbjct: 293 DIFKETTTKIQNVESGIS-ILNGRLCHKRVLLVLDDVNKLDQLNALCGSCKWFAPGSRII 351

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK +L   R +  KIY +  ++  E+ E F   AFK+    +D +  S +VV Y+ 
Sbjct: 352 ITTRDKHILRGNRVD--KIYIMKEMDESESLELFSWHAFKQARPSKDFSEISTNVVQYSG 409

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFL 239
             PL LEVLGS L  +  + W  VL  L RI   ++H     LKIS++ L     KSIFL
Sbjct: 410 RLPLALEVLGSYLFDREVTEWICVLEKLKRIPNDQVHQK---LKISYDGLNDDTEKSIFL 466

Query: 240 DIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSISG-NFLNMHDILQEMGRQIV 295
           DIACFF G D++ V  IL+ S   +++ + +L+++SLV++   N L MHD+L++MGR+I+
Sbjct: 467 DIACFFIGMDRNDVIHILNGSGFFAEIGISVLVERSLVTVDDKNKLGMHDLLRDMGREII 526

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           R++S  EP +RSRLW   ++  VL  + GT A+EG+ L +          + F NM  LR
Sbjct: 527 REKSPMEPEERSRLWFHDDVLDVLSEHTGTKAVEGLTLKMPCHSAQRFSTKTFENMKKLR 586

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
           L                      L  S VQL     Y+ + L++LHW+ +PLR +PSNF 
Sbjct: 587 L----------------------LQLSGVQLDGDFKYISRNLKWLHWNGFPLRCIPSNFY 624

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
            +N+V + L  S  +  W+         IQ  + L  L+      L   P          
Sbjct: 625 QRNIVSIELENSNAKLVWK--------EIQRMEQLKILNLSHSHHLTQTP---------- 666

Query: 476 INFSYCVNLIEF-----PQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
            +FSY  NL +      P++S              +V  SI  L  + +++L+ C  L  
Sbjct: 667 -DFSYLPNLEKLVLEDCPRLS--------------QVSHSIGHLKKVVLINLKDCISLCS 711

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
           +  +   L++L TLIL GCL ++   E LE+ME L  + ++ T IT++P S 
Sbjct: 712 LPRNIYTLKTLNTLILSGCLMIDKLEEDLEQMESLTTLIANNTGITKVPFSL 763


>gi|145334739|ref|NP_001078715.1| putative WRKY transcription factor 52 [Arabidopsis thaliana]
 gi|10176997|dbj|BAB10247.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007840|gb|AED95223.1| putative WRKY transcription factor 52 [Arabidopsis thaliana]
          Length = 1187

 Score =  295 bits (756), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 247/807 (30%), Positives = 382/807 (47%), Gaps = 162/807 (20%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ VGIWGM GIGKTTLAKA+FDQ S  F+ SCF+ D   +    G    L++Q+L    
Sbjct: 172 IRCVGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCLLEEQLLPGND 231

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
           +  ++++        ++R+   ++L+VLDDV      +  +   D  G GS I++T+RDK
Sbjct: 232 ATIMKLSS------LRDRLNSKRVLVVLDDVRNALVGESFLEGFDWLGPGSLIIITSRDK 285

Query: 127 RVLEKFRGEEKKIYRVNGLEFEEAFEHF-CNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
           +V         +IY V GL  +EA + F  + + KE+   ++L   S  V++Y  GNPL 
Sbjct: 286 QVF--CLCGINQIYEVQGLNEKEARQLFLLSASIKEDMGEQNLQELSVRVINYANGNPLA 343

Query: 186 LEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
           + V G  L  K+K S        L R        I D  K +++ L+   K+IFLDIACF
Sbjct: 344 ISVYGRELKGKKKLSEMETAFLKLKR---RPPFKIVDAFKSTYDTLSDNEKNIFLDIACF 400

Query: 245 FEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F+GE+ ++V  +L+         +D+L+DK LV+IS N + +H + Q++GR+I+  E+  
Sbjct: 401 FQGENVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREIINGET-V 459

Query: 302 EPGKRSRLWDPKEISRVLKHN---------------KGTDAIEGIFLDLSKIKGINLDPR 346
           +  +R RLW+P  I  +L++N               +G++ IEG+FLD S ++  +L P 
Sbjct: 460 QIERRRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDTSNLR-FDLQPS 518

Query: 347 AFTNMSNLRLFKFYV--PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT 404
           AF NM NLRL K Y   P+ + +   P+ S               L  LP +LR LHW+ 
Sbjct: 519 AFKNMLNLRLLKIYCSNPEVHPVINFPTGS---------------LHSLPNELRLLHWEN 563

Query: 405 YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA---------CVPSSIQNF------KY 449
           YPL++LP NF P++LVE+N+  S++++ W G K          C    + +       + 
Sbjct: 564 YPLKSLPQNFDPRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLVDIDDLLKAEN 623

Query: 450 LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPS 509
           L  +  +GC  L++FP+    +    +N S C+ +    +I   + +L+L  + I  +P 
Sbjct: 624 LEVIDLQGCTRLQNFPAAGRLLRLRVVNLSGCIKIKSVLEIPPNIEKLHLQGTGILALP- 682

Query: 510 SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY 569
                                +ST     R LV         L   P + E++E L    
Sbjct: 683 ---------------------VSTVKPNHRELVNF-------LTEIPGLSEELERL---- 710

Query: 570 SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSV 629
              T + E  SS ++L  L  L ++DCS L +LP N+ +L+                   
Sbjct: 711 ---TSLLESNSSCQDLGKLICLELKDCSCLQSLP-NMANLD------------------- 747

Query: 630 ALSNMLRSLDSSHCKGLES---FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL 686
                L  LD S C  L S   FPR        +  L++   A+RE+PQ      SLEIL
Sbjct: 748 -----LNVLDLSGCSSLNSIQGFPR-------FLKQLYLGGTAIREVPQ---LPQSLEIL 792

Query: 687 YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF 746
              G+   SLP     M+ L F                  LK L L  C  L+++   P 
Sbjct: 793 NAHGSCLRSLP----NMANLEF------------------LKVLDLSGCSELETIQGFPR 830

Query: 747 CLESLDLTGCNMLRSLPELPLCLQYLN 773
            L+ L   G   LR +P+LPL L+ LN
Sbjct: 831 NLKELYFAG-TTLREVPQLPLSLEVLN 856



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)

Query: 220  YDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI 276
            Y++L++S++ L    K +FL IA  F  ED DFVA ++   + DV   L +L D SL+S+
Sbjct: 1084 YEVLRVSYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLADVSLISV 1143

Query: 277  SGNF-LNMHDILQEMGRQIVRQES 299
            S N  + MH + ++MG++I+  +S
Sbjct: 1144 SSNGEIVMHSLQRQMGKEILHGQS 1167



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 169/420 (40%), Gaps = 76/420 (18%)

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAIS 623
           L+ ++ +  P+  LP +F+  P   V      S+L  L     +LE L  I L  +  + 
Sbjct: 556 LRLLHWENYPLKSLPQNFD--PRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLV 613

Query: 624 QLPSSVALSNMLRSLDSSHCKGLESFPRTF-LLGLSAMGLLH-ISDYAVREIPQEIAYLS 681
            +   +   N L  +D   C  L++FP    LL L  + L   I   +V EIP  I    
Sbjct: 614 DIDDLLKAEN-LEVIDLQGCTRLQNFPAAGRLLRLRVVNLSGCIKIKSVLEIPPNI---- 668

Query: 682 SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL----------- 730
             E L+L G    +LP     +S ++  H E  N L  +P L   L+ L           
Sbjct: 669 --EKLHLQGTGILALP-----VSTVKPNHRELVNFLTEIPGLSEELERLTSLLESNSSCQ 721

Query: 731 --------HLIDCKMLQSLPVLP-FCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLR 781
                    L DC  LQSLP +    L  LDL+GC+ L S+   P  L+ L L     +R
Sbjct: 722 DLGKLICLELKDCSCLQSLPNMANLDLNVLDLSGCSSLNSIQGFPRFLKQLYLGG-TAIR 780

Query: 782 SLPELPLCLQLLTVRNCNRLQSLPEI--LLCLQELDAS------VLEKLSKHSPDLQWAP 833
            +P+LP  L++L     + L+SLP +  L  L+ LD S       ++   ++  +L +A 
Sbjct: 781 EVPQLPQSLEILNAHG-SCLRSLPNMANLEFLKVLDLSGCSELETIQGFPRNLKELYFAG 839

Query: 834 ESLKSA--------------------AICFEFTNCLKLNGKANNKILADSLLRIRHMAIA 873
            +L+                       + ++F N   L+ +  N  L  +L  ++H+   
Sbjct: 840 TTLREVPQLPLSLEVLNAHGSDSEKLPMHYKFNNFFDLSQQVVNDFLLKTLTYVKHIP-- 897

Query: 874 SLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAF 933
               GY   +  K      S    P     +   +  SGSS+  +L  HS    L+GF  
Sbjct: 898 ---RGYTQELINKAPTFSFS---APSHTNQNATFDLQSGSSVMTRL-NHSWRNTLVGFGM 950


>gi|105922376|gb|ABF81413.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1152

 Score =  295 bits (755), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 209/595 (35%), Positives = 305/595 (51%), Gaps = 76/595 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGP-NIP 78
           KTT+A+ ++D F  +F+GSCF+++VR      GG   LQ+Q+LS  L E+  V       
Sbjct: 205 KTTIARVVYDSFRWQFKGSCFLANVRDVFAEKGGPRRLQEQLLSEILMERASVCDSYRGI 264

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRG-EEK 137
              K R+R  K+L++LDDVN+  QL+ L  E   FG GSRI++T+RDK V   F G ++ 
Sbjct: 265 EMIKRRLRLKKILLILDDVNDKKQLEFLAAEPGWFGPGSRIIITSRDKNV---FTGNDDT 321

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           KIY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV+GS L  +R
Sbjct: 322 KIYEAEKLNDDDALMLFSQKAFKNDQPAEDFVKLSKQVVGYANGLPLALEVIGSFLYGRR 381

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W   ++ +N I + EI     +L +SF+ L    K IFLDIACF +G   D +  IL
Sbjct: 382 IPEWRGAINRMNEIPDDEI---IKVLLVSFDGLHELEKKIFLDIACFLKGFKIDRITRIL 438

Query: 258 DD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           D          + +LI++SL+S+S + + MH++LQ+MG++I+R+ES  EPG+RSRLW  +
Sbjct: 439 DGWRGFHTGIGIPVLIERSLISVSRDQVWMHNLLQKMGQEIIRRESPDEPGRRSRLWTYE 498

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           ++   L  N G + IE IFLD+  IK    + +AF+ MS LRL K               
Sbjct: 499 DVCLALMDNTGKEKIEAIFLDMPGIKEAQWNMKAFSKMSRLRLLKI-------------- 544

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
                     +QL  G + L   LR+L W +YP ++LP+  +   LVEL++  S +EQ W
Sbjct: 545 --------DNMQLSEGPEDLSNNLRFLEWHSYPSKSLPAGLQVDELVELHMANSNLEQLW 596

Query: 434 EGEKACVPSSIQNF---------------------------------------KYLSALS 454
            G K+ V   I N                                        K L  ++
Sbjct: 597 YGCKSAVKLKIINLNNSLYLSKTPDLTGIPNLESLILEGCTSLSEVHPSLGRHKKLQYVN 656

Query: 455 FKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG---KVTRLYLGQSAIEEVPSSI 511
              C+S+R  PSNL            C  L +FP I G   ++T L+L ++ I ++ SSI
Sbjct: 657 LVNCRSIRILPSNLEMESLKFFTLDGCSKLEKFPDIVGNMNQLTVLHLDETGITKLSSSI 716

Query: 512 ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLK 566
             L  LEVL +  C+ L+ I +S   L+SL  L L  C  L++ P+ L K+E L+
Sbjct: 717 HHLIGLEVLSMNNCRNLESIPSSIGCLKSLKKLDLSDCSELQNIPQNLGKVESLE 771



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 150/321 (46%), Gaps = 49/321 (15%)

Query: 657 LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM 716
           +S + LL I +  + E P++++  ++L  L       +SLPA + Q+ +L  +H+ + N+
Sbjct: 536 MSRLRLLKIDNMQLSEGPEDLS--NNLRFLEWHSYPSKSLPAGL-QVDELVELHMANSNL 592

Query: 717 LQSLP--ELPLCLKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSL-PELPLC--L 769
            Q     +  + LK ++L +   L   P L     LESL L GC  L  + P L     L
Sbjct: 593 EQLWYGCKSAVKLKIINLNNSLYLSKTPDLTGIPNLESLILEGCTSLSEVHPSLGRHKKL 652

Query: 770 QYLNLEDCNMLRSLP-ELPL-CLQLLTVRNCNRLQSLPEIL-----LCLQELDASVLEKL 822
           QY+NL +C  +R LP  L +  L+  T+  C++L+  P+I+     L +  LD + + KL
Sbjct: 653 QYVNLVNCRSIRILPSNLEMESLKFFTLDGCSKLEKFPDIVGNMNQLTVLHLDETGITKL 712

Query: 823 SK---HSPDLQWAP-------ESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAI 872
           S    H   L+          ES+ S+  C +    L L+  +  + +  +L ++  +  
Sbjct: 713 SSSIHHLIGLEVLSMNNCRNLESIPSSIGCLKSLKKLDLSDCSELQNIPQNLGKVESLEF 772

Query: 873 ASL---RLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLI 929
             L   R G+ +AI              PG+EIP WF++QS GSSI +Q+P  S     +
Sbjct: 773 DGLSNPRPGFGIAI--------------PGNEIPGWFNHQSKGSSISVQVPSWS-----M 813

Query: 930 GFAFCAVLDSKKVDSDCFRYF 950
           GF  C    +       F +F
Sbjct: 814 GFVACVAFSANDESPSLFCHF 834


>gi|237769813|dbj|BAH59425.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1373

 Score =  295 bits (755), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 258/797 (32%), Positives = 385/797 (48%), Gaps = 140/797 (17%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ VGIWGM GIGKTTLAKA+FDQ S  F+ SCF+ D   +    G    L++Q+L    
Sbjct: 172 IRCVGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCLLEEQLLPGND 231

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
           +  +++         ++R+   ++L+VLDDV      +  +   D  G GS I++T+RDK
Sbjct: 232 ATIMKLNS------LRDRLNSKRVLVVLDDVCNALVAESFLEGFDWLGPGSLIIITSRDK 285

Query: 127 RVLEKFR-GEEKKIYRVNGLEFEEAFEHF-CNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           +V   FR     +IY V GL  +EA + F  + + KE+   ++L+  S  V+SY  GNPL
Sbjct: 286 QV---FRLCGINQIYEVQGLNEKEARQLFLLSASIKEDMGEQNLHELSVRVISYANGNPL 342

Query: 185 VLEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
            + V G  L  K+K S        L R        I D  K S++ L+   K+IFLDIAC
Sbjct: 343 AISVYGRELKGKKKLSEMETAFLKLKR---RPPFKIVDAFKSSYDTLSDNEKNIFLDIAC 399

Query: 244 FFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
           FF+GE+ ++V  +L+         +D+L+DK LV+IS N + +H + Q++GR+I+  E+ 
Sbjct: 400 FFQGENVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREIINGET- 458

Query: 301 KEPGKRSRLWDPKEISRVLKHN---------------KGTDAIEGIFLDLSKIKGINLDP 345
            +  +R RLW+P  I  +L++N               +G++ IEG+FLD S ++  +L P
Sbjct: 459 VQIERRRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDTSNLR-FDLQP 517

Query: 346 RAFTNMSNLRLFKFYV--PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWD 403
            AF NM NLRL K Y   P+ + +   P+ S               L  LP +LR LHW+
Sbjct: 518 SAFKNMLNLRLLKIYCSNPEVHPVINFPTGS---------------LHSLPNELRLLHWE 562

Query: 404 TYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRS 463
            YPL++LP NF P++LVE+N+  S++++ W G K        N + L  +     Q L  
Sbjct: 563 NYPLKSLPQNFDPRHLVEINMPYSQLQKLWGGTK--------NLEMLRTIRLCHSQHLVD 614

Query: 464 FPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL-YLGQSAIEEVPSSIECLTDLEVLDL 522
               L       I+   C  L  FP  +G++ RL  +  S   ++ S +E   ++E L L
Sbjct: 615 IDDLLKAENLEVIDLQGCTRLQNFPA-AGRLLRLRVVNLSGCIKIKSVLEIPPNIEKLHL 673

Query: 523 RGCKRLK-RISTSFCKLRSLVTLILLGCLNLEHFPEILE--KMEHLKRIYSDRTPITELP 579
           +G   L   +ST     R LV         L   P + E  K+E L       T + E  
Sbjct: 674 QGTGILALPVSTVKPNHRELVNF-------LTEIPGLSEASKLERL-------TSLLESN 719

Query: 580 SSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
           SS ++L  L  L ++DCS L +LP N+ +L+                        L  LD
Sbjct: 720 SSCQDLGKLICLELKDCSCLQSLP-NMANLD------------------------LNVLD 754

Query: 640 SSHCKGLES---FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL 696
            S C  L S   FPR        +  L++   A+RE+PQ      SLEIL   G+   SL
Sbjct: 755 LSGCSSLNSIQGFPR-------FLKQLYLGGTAIREVPQ---LPQSLEILNAHGSCLRSL 804

Query: 697 PAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGC 756
           P     M+ L F                  LK L L  C  L+++   P  L+ L   G 
Sbjct: 805 P----NMANLEF------------------LKVLDLSGCSELETIQGFPRNLKELYFAG- 841

Query: 757 NMLRSLPELPLCLQYLN 773
             LR +P+LPL L+ LN
Sbjct: 842 TTLREVPQLPLSLEVLN 858



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)

Query: 220  YDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI 276
            Y++L++S++ L    K +FL IA  F  ED DFVA ++   + DV   L +L D SL+S+
Sbjct: 1086 YEVLRVSYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLADVSLISV 1145

Query: 277  SGNF-LNMHDILQEMGRQIVRQES 299
            S N  + MH + ++MG++I+  +S
Sbjct: 1146 SSNGEIVMHSLQRQMGKEILHGQS 1169



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 128/300 (42%), Gaps = 47/300 (15%)

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAIS 623
           L+ ++ +  P+  LP +F+  P   V      S+L  L     +LE L  I L  +  + 
Sbjct: 556 LRLLHWENYPLKSLPQNFD--PRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSQHLV 613

Query: 624 QLPSSVALSNMLRSLDSSHCKGLESFPRTF-LLGLSAMGLLH-ISDYAVREIPQEIAYLS 681
            +   +   N L  +D   C  L++FP    LL L  + L   I   +V EIP  I    
Sbjct: 614 DIDDLLKAEN-LEVIDLQGCTRLQNFPAAGRLLRLRVVNLSGCIKIKSVLEIPPNI---- 668

Query: 682 SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY------------ 729
             E L+L G    +LP     +S ++  H E  N L  +P L    K             
Sbjct: 669 --EKLHLQGTGILALP-----VSTVKPNHRELVNFLTEIPGLSEASKLERLTSLLESNSS 721

Query: 730 ---------LHLIDCKMLQSLPVLP-FCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM 779
                    L L DC  LQSLP +    L  LDL+GC+ L S+   P  L+ L L     
Sbjct: 722 CQDLGKLICLELKDCSCLQSLPNMANLDLNVLDLSGCSSLNSIQGFPRFLKQLYL-GGTA 780

Query: 780 LRSLPELPLCLQLLTVRNCNRLQSLPEI--LLCLQELDASVLEKLSKHSPDLQWAPESLK 837
           +R +P+LP  L++L     + L+SLP +  L  L+ LD S   +L      +Q  P +LK
Sbjct: 781 IREVPQLPQSLEILNAHG-SCLRSLPNMANLEFLKVLDLSGCSELET----IQGFPRNLK 835


>gi|15240885|ref|NP_198650.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758866|dbj|BAB09448.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006916|gb|AED94299.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1059

 Score =  295 bits (755), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 216/673 (32%), Positives = 348/673 (51%), Gaps = 69/673 (10%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVR--------GNSETAGGLE 55
           S+ V+++GIWG  GIGKTT+A+ ++++FS +F  S F+ +++        G+ + +  L 
Sbjct: 249 SNEVKMIGIWGPSGIGKTTIARVLYNRFSGDFGLSVFMDNIKELMHTRPVGSDDYSAKL- 307

Query: 56  HLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF 113
           HLQ Q++S   + K       I H     +R++  K+LIVLD +++  QL  +  E   F
Sbjct: 308 HLQNQLMSEITNHK----ETKITHLGVVPDRLKDNKVLIVLDSIDQSIQLDAIAKETQWF 363

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSR 173
           G GSRI++TT+D+++LE    +   IY+V      EAF+ FC +AF +N   +     + 
Sbjct: 364 GPGSRIIITTQDQKLLEAH--DINNIYKVEFPSKYEAFQIFCTYAFGQNFPKDGFEKLAW 421

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            V       PL L V+GS      K  W   L  L    ++ I  I   LK S++ L+P 
Sbjct: 422 EVTDLLGELPLGLRVMGSHFRRMSKDDWVIALPRLKTRLDANIQSI---LKFSYDALSPE 478

Query: 234 VKSIFLDIACFFEGED----KDFVASILDDSESDVLDILIDKSLVSISG---NFLNMHDI 286
            K +FL IAC F  E+    +D++A    D+    L +L +KSL+ + G     L MH++
Sbjct: 479 DKDLFLHIACLFNNEEIVKVEDYLALDFLDARHG-LHLLAEKSLIDLEGVNYKVLKMHNL 537

Query: 287 LQEMGRQIVR----QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-I 341
           L+++G++IVR      S +EP KR  L D K+I  VL    G+ +I+GI  DL  + G +
Sbjct: 538 LEQLGKEIVRYHPAHHSIREPEKRQFLVDTKDICEVLADGTGSKSIKGICFDLDNLSGRL 597

Query: 342 NLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLH 401
           N+  RAF  M+NL+  +    +                   K+ LP GL+YLPKKLR + 
Sbjct: 598 NISERAFEGMTNLKFLRVLRDR-----------------SEKLYLPQGLNYLPKKLRLIE 640

Query: 402 WDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSL 461
           WD +P+++LPSNF    LV L++R SK+E+ WEG++      + N K+   ++    ++L
Sbjct: 641 WDYFPMKSLPSNFCTTYLVNLHMRKSKLEKLWEGKQP-----LGNLKW---MNLSNSRNL 692

Query: 462 RSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL----YLGQSAIEEVPSSIECLTDL 517
           +  P          +N + C +L+E P   G  T L     +  +++ E+PSSI  L  L
Sbjct: 693 KELPDLSTATKLQDLNLTRCSSLVEIPFSIGNTTNLEKLNLVMCTSLVELPSSIGSLHKL 752

Query: 518 EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
             L LRGC +L+ + T+   L SL  L +  C  L+ FP+I   ++HL      RT I E
Sbjct: 753 RELRLRGCSKLEVLPTNIS-LESLDNLDITDCSLLKSFPDISTNIKHLSLA---RTAINE 808

Query: 578 LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
           +PS  ++   L    V   S  +NL ++  +L+ +  + +  + + +LP  V   + L +
Sbjct: 809 VPSRIKSWSRLRYFVV---SYNENLKESPHALDTITMLSSNDTKMQELPRWVKKISRLET 865

Query: 638 LDSSHCKGLESFP 650
           L    CK L + P
Sbjct: 866 LMLEGCKNLVTLP 878



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 179/455 (39%), Gaps = 113/455 (24%)

Query: 504 IEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKME 563
           ++ +PS+  C T L  L +R  K L+++      L +L  + L    NL+  P+ L    
Sbjct: 646 MKSLPSNF-CTTYLVNLHMRKSK-LEKLWEGKQPLGNLKWMNLSNSRNLKELPD-LSTAT 702

Query: 564 HLKRIYSDR-TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASA 621
            L+ +   R + + E+P S  N   LE L +  C+ L  LP +IGSL  L  + L   S 
Sbjct: 703 KLQDLNLTRCSSLVEIPFSIGNTTNLEKLNLVMCTSLVELPSSIGSLHKLRELRLRGCSK 762

Query: 622 ISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLS 681
           +  LP++++L + L +LD + C  L+SFP                     +I   I +LS
Sbjct: 763 LEVLPTNISLES-LDNLDITDCSLLKSFP---------------------DISTNIKHLS 800

Query: 682 SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
                 L+      +P+ IK  S+LR+  +     L+  P     +  L   D KM Q L
Sbjct: 801 ------LARTAINEVPSRIKSWSRLRYFVVSYNENLKESPHALDTITMLSSNDTKM-QEL 853

Query: 742 PVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRL 801
           P                 R + ++   L+ L LE C  L +LPELP  L  + V NC   
Sbjct: 854 P-----------------RWVKKISR-LETLMLEGCKNLVTLPELPDSLSNIGVINCE-- 893

Query: 802 QSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILA 861
                    L+ LD S                   K   +   F NCLKLN +A   I  
Sbjct: 894 --------SLERLDCSFY-----------------KHPNMFIGFVNCLKLNKEARELIQT 928

Query: 862 DSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
            S                             +  +LPG  +P  F+ + +G S+ + L  
Sbjct: 929 SS----------------------------STCSILPGRRVPSNFTYRKTGGSVLVNLNQ 960

Query: 922 HSSCRNLIGFAFCAVL---DSKKVDSD--CFRYFY 951
                 L+ F  C +L   D KK +++   F+ +Y
Sbjct: 961 SPLSTTLV-FKACVLLVNKDDKKKEANGTSFQVYY 994


>gi|147815446|emb|CAN68384.1| hypothetical protein VITISV_018351 [Vitis vinifera]
          Length = 940

 Score =  295 bits (755), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 202/505 (40%), Positives = 284/505 (56%), Gaps = 31/505 (6%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           +SD V++VGIWGMGGIGKTTL +A++ + S++FEG  F+ +V  + +   GL  LQ+++L
Sbjct: 208 ASDDVRMVGIWGMGGIGKTTLVRAVYSRISYQFEGCSFLENVAEDLKKK-GLIGLQEKLL 266

Query: 63  STTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           S  L E+      N+   T  K R+   K+LIVLD+VN+   L+ LIG  D FG+GS I+
Sbjct: 267 SHLLEEE----NLNMKELTSIKARLHSKKVLIVLDNVNDPTILECLIGNQDWFGRGSTII 322

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDKR+L      +  +Y+V+    +EA E    ++ K     ED    SR V+ Y +
Sbjct: 323 ITTRDKRLL---LSHKINLYKVHKFNDDEALEFLARYSLKHELLREDFLELSRVVICYAQ 379

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL L VLGS L    K  W   L  L  I   +IH   ++LKIS++ L    K+IFLD
Sbjct: 380 GLPLALTVLGSFLFSMSKEEWRDQLDKLKSIPNMKIH---EVLKISYDGLDFEEKNIFLD 436

Query: 241 IACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
           IACF +GEDK++V  ILD         +  L DKSL+S   N + MHD++QEMG +IVRQ
Sbjct: 437 IACFLKGEDKNYVKEILDYCGFFSVSGIRALADKSLISFFHNRIMMHDLIQEMGMEIVRQ 496

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRL 356
           ES   PG+RSRLW  K+I+  LK N     IEGIFLDLS  +  I+   +AF  M  LRL
Sbjct: 497 ESHN-PGQRSRLWLHKDINDALKKNTENGKIEGIFLDLSHSQEIIDFSTQAFPRMYKLRL 555

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
            K Y           +++ E      KV     L +   +LRYL+   Y L++L ++F  
Sbjct: 556 LKVYESNKISRNFGDTLNKEN----CKVHFSPKLRFCYDELRYLYLYGYSLKSLDNDFXA 611

Query: 417 KNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV-- 474
           KNLV L++  S + + W+G K  V  S+     L+ LS K C+ L+S PS++   C +  
Sbjct: 612 KNLVHLSMHYSHINRLWKGIK--VHPSLGVLNKLNFLSLKNCEKLKSLPSSM---CDLKS 666

Query: 475 --TINFSYCVNLIEFPQISGKVTRL 497
             T   S C  L +FP+  G +  L
Sbjct: 667 LETFILSGCSRLEDFPENFGNLEML 691



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 4/92 (4%)

Query: 483 NLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLV 542
           NL+        + RL+ G     +V  S+  L  L  L L+ C++LK + +S C L+SL 
Sbjct: 613 NLVHLSMHYSHINRLWKGI----KVHPSLGVLNKLNFLSLKNCEKLKSLPSSMCDLKSLE 668

Query: 543 TLILLGCLNLEHFPEILEKMEHLKRIYSDRTP 574
           T IL GC  LE FPE    +E LK +++D  P
Sbjct: 669 TFILSGCSRLEDFPENFGNLEMLKELHADGIP 700


>gi|193584702|gb|ACF19651.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago sativa]
          Length = 1125

 Score =  295 bits (755), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 208/586 (35%), Positives = 310/586 (52%), Gaps = 64/586 (10%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           ++ V ++G+WGMGGIGKTT+AKAI+++    FEG  F++++R   E   G  +LQ+Q++ 
Sbjct: 258 TNDVLLLGMWGMGGIGKTTIAKAIYNKIGRNFEGRSFIANIREVWEKDCGQVNLQEQLMY 317

Query: 64  TTLSE---KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
               E   K++     I    K R+   ++L+VLDDV+++ QL  L G    F  GSRI+
Sbjct: 318 DIFKETTTKIQNVESGIS-ILKGRLCHKRVLLVLDDVSKLDQLNALCGSCKWFAPGSRII 376

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK VL   R +  +IY +  ++  E+ E F   AFK+    ED +  S++VV Y+ 
Sbjct: 377 ITTRDKHVLRGNRVD--RIYIMKEMDETESLELFSWHAFKQTSPTEDFSEISKNVVMYSG 434

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFL 239
           G PL LEVLGS L  +    W  VL  L  I     H +++ LKIS++ L     KS FL
Sbjct: 435 GLPLALEVLGSYLFDREVLEWVCVLEKLKIIPN---HQLHEKLKISYDGLNDDTEKSTFL 491

Query: 240 DIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSISG-NFLNMHDILQEMGRQIV 295
           DIACFF G D++ V  IL+     +++ + +L+++SLV++   N L MHD+L++MGR+I+
Sbjct: 492 DIACFFIGMDRNDVIQILNGCGFFAEIGISVLVERSLVTVDDKNKLGMHDLLRDMGREII 551

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           R++S  EP +RSRLW  +++  VL  + GT A+EG+ L L          +AF NM  LR
Sbjct: 552 REKSPMEPEERSRLWFQEDVLDVLSEHTGTKAVEGLTLKLPGHNAQRFSTKAFENMKKLR 611

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
           L                      L  S VQL     YL + LR+LHW+ +PL  LPSNF 
Sbjct: 612 L----------------------LQLSGVQLDGDFKYLSRNLRWLHWNGFPLTCLPSNFY 649

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
            +N+V + L  S V+  W+         +Q  + L  L+      L   P          
Sbjct: 650 QRNIVSIELENSNVKLLWK--------EMQRMEQLKILNLSHSHYLTQTP---------- 691

Query: 476 INFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF 535
            +FS   NL +   I     RL        EV  SI  L  + ++ L+ C  L  +  + 
Sbjct: 692 -DFSNMPNLEKL--ILKDCPRL-------SEVSQSIGHLKKVLLISLKDCISLCNLPRNI 741

Query: 536 CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
             L+SL TLIL GCL ++   E LE+M+ L  + +  T IT++P S
Sbjct: 742 YSLKSLKTLILSGCLKIDKLEEDLEQMKSLTTLMAGNTGITKVPFS 787



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 4/134 (2%)

Query: 559 LEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-L 616
           +++ME LK +  S    +T+ P  F N+P LE L ++DC +L  +  +IG L+ +  I L
Sbjct: 670 MQRMEQLKILNLSHSHYLTQTPD-FSNMPNLEKLILKDCPRLSEVSQSIGHLKKVLLISL 728

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE 676
               ++  LP ++     L++L  S C  ++      L  + ++  L   +  + ++P  
Sbjct: 729 KDCISLCNLPRNIYSLKSLKTLILSGCLKIDKLEED-LEQMKSLTTLMAGNTGITKVPFS 787

Query: 677 IAYLSSLEILYLSG 690
           +    S+  + L G
Sbjct: 788 VVRSKSIGFISLCG 801


>gi|145358882|ref|NP_199339.2| putative WRKY transcription factor 52 [Arabidopsis thaliana]
 gi|76803833|sp|Q9FH83.3|WRK52_ARATH RecName: Full=Probable WRKY transcription factor 52; AltName:
           Full=Disease resistance protein RRS1; AltName:
           Full=Disease resistance protein SLH1; AltName:
           Full=Protein SENSITIVE TO LOW HUMIDITY 1; AltName:
           Full=Resistance to Ralstonia solanacearum 1 protein;
           AltName: Full=WRKY DNA-binding protein 52
 gi|110741008|dbj|BAE98598.1| disease resistance like protein [Arabidopsis thaliana]
 gi|332007839|gb|AED95222.1| putative WRKY transcription factor 52 [Arabidopsis thaliana]
          Length = 1288

 Score =  295 bits (755), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 247/807 (30%), Positives = 382/807 (47%), Gaps = 162/807 (20%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ VGIWGM GIGKTTLAKA+FDQ S  F+ SCF+ D   +    G    L++Q+L    
Sbjct: 172 IRCVGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCLLEEQLLPGND 231

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
           +  ++++        ++R+   ++L+VLDDV      +  +   D  G GS I++T+RDK
Sbjct: 232 ATIMKLSS------LRDRLNSKRVLVVLDDVRNALVGESFLEGFDWLGPGSLIIITSRDK 285

Query: 127 RVLEKFRGEEKKIYRVNGLEFEEAFEHF-CNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
           +V         +IY V GL  +EA + F  + + KE+   ++L   S  V++Y  GNPL 
Sbjct: 286 QVF--CLCGINQIYEVQGLNEKEARQLFLLSASIKEDMGEQNLQELSVRVINYANGNPLA 343

Query: 186 LEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
           + V G  L  K+K S        L R        I D  K +++ L+   K+IFLDIACF
Sbjct: 344 ISVYGRELKGKKKLSEMETAFLKLKR---RPPFKIVDAFKSTYDTLSDNEKNIFLDIACF 400

Query: 245 FEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F+GE+ ++V  +L+         +D+L+DK LV+IS N + +H + Q++GR+I+  E+  
Sbjct: 401 FQGENVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREIINGET-V 459

Query: 302 EPGKRSRLWDPKEISRVLKHN---------------KGTDAIEGIFLDLSKIKGINLDPR 346
           +  +R RLW+P  I  +L++N               +G++ IEG+FLD S ++  +L P 
Sbjct: 460 QIERRRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDTSNLR-FDLQPS 518

Query: 347 AFTNMSNLRLFKFYV--PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT 404
           AF NM NLRL K Y   P+ + +   P+ S               L  LP +LR LHW+ 
Sbjct: 519 AFKNMLNLRLLKIYCSNPEVHPVINFPTGS---------------LHSLPNELRLLHWEN 563

Query: 405 YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA---------CVPSSIQNF------KY 449
           YPL++LP NF P++LVE+N+  S++++ W G K          C    + +       + 
Sbjct: 564 YPLKSLPQNFDPRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLVDIDDLLKAEN 623

Query: 450 LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPS 509
           L  +  +GC  L++FP+    +    +N S C+ +    +I   + +L+L  + I  +P 
Sbjct: 624 LEVIDLQGCTRLQNFPAAGRLLRLRVVNLSGCIKIKSVLEIPPNIEKLHLQGTGILALP- 682

Query: 510 SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY 569
                                +ST     R LV         L   P + E++E L    
Sbjct: 683 ---------------------VSTVKPNHRELVNF-------LTEIPGLSEELERL---- 710

Query: 570 SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSV 629
              T + E  SS ++L  L  L ++DCS L +LP N+ +L+                   
Sbjct: 711 ---TSLLESNSSCQDLGKLICLELKDCSCLQSLP-NMANLD------------------- 747

Query: 630 ALSNMLRSLDSSHCKGLES---FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL 686
                L  LD S C  L S   FPR        +  L++   A+RE+PQ      SLEIL
Sbjct: 748 -----LNVLDLSGCSSLNSIQGFPR-------FLKQLYLGGTAIREVPQ---LPQSLEIL 792

Query: 687 YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF 746
              G+   SLP     M+ L F                  LK L L  C  L+++   P 
Sbjct: 793 NAHGSCLRSLP----NMANLEF------------------LKVLDLSGCSELETIQGFPR 830

Query: 747 CLESLDLTGCNMLRSLPELPLCLQYLN 773
            L+ L   G   LR +P+LPL L+ LN
Sbjct: 831 NLKELYFAG-TTLREVPQLPLSLEVLN 856



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)

Query: 220  YDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI 276
            Y++L++S++ L    K +FL IA  F  ED DFVA ++   + DV   L +L D SL+S+
Sbjct: 1084 YEVLRVSYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLADVSLISV 1143

Query: 277  SGNF-LNMHDILQEMGRQIVRQES 299
            S N  + MH + ++MG++I+  +S
Sbjct: 1144 SSNGEIVMHSLQRQMGKEILHGQS 1167



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 168/426 (39%), Gaps = 88/426 (20%)

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAIS 623
           L+ ++ +  P+  LP +F+  P   V      S+L  L     +LE L  I L  +  + 
Sbjct: 556 LRLLHWENYPLKSLPQNFD--PRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLV 613

Query: 624 QLPSSVALSNMLRSLDSSHCKGLESFPRTF-LLGLSAMGLLH-ISDYAVREIPQEIAYLS 681
            +   +   N L  +D   C  L++FP    LL L  + L   I   +V EIP  I    
Sbjct: 614 DIDDLLKAEN-LEVIDLQGCTRLQNFPAAGRLLRLRVVNLSGCIKIKSVLEIPPNI---- 668

Query: 682 SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL----------- 730
             E L+L G    +LP     +S ++  H E  N L  +P L   L+ L           
Sbjct: 669 --EKLHLQGTGILALP-----VSTVKPNHRELVNFLTEIPGLSEELERLTSLLESNSSCQ 721

Query: 731 --------HLIDCKMLQSLPVLP-FCLESLDLTGCNML--------------------RS 761
                    L DC  LQSLP +    L  LDL+GC+ L                    R 
Sbjct: 722 DLGKLICLELKDCSCLQSLPNMANLDLNVLDLSGCSSLNSIQGFPRFLKQLYLGGTAIRE 781

Query: 762 LPELPLCLQYLNLEDCNMLRSLPELPLC--LQLLTVRNCNRLQSLPEILLCLQELDAS-- 817
           +P+LP  L+ LN    + LRSLP +     L++L +  C+ L+++      L+EL  +  
Sbjct: 782 VPQLPQSLEILNAHG-SCLRSLPNMANLEFLKVLDLSGCSELETIQGFPRNLKELYFAGT 840

Query: 818 ----------VLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRI 867
                      LE L+ H  D +  P       + ++F N   L+ +  N  L  +L  +
Sbjct: 841 TLREVPQLPLSLEVLNAHGSDSEKLP-------MHYKFNNFFDLSQQVVNDFLLKTLTYV 893

Query: 868 RHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRN 927
           +H+       GY   +  K      S    P     +   +  SGSS+  +L  HS    
Sbjct: 894 KHIP-----RGYTQELINKAPTFSFS---APSHTNQNATFDLQSGSSVMTRL-NHSWRNT 944

Query: 928 LIGFAF 933
           L+GF  
Sbjct: 945 LVGFGM 950


>gi|357513935|ref|XP_003627256.1| Resistance protein PRG [Medicago truncatula]
 gi|355521278|gb|AET01732.1| Resistance protein PRG [Medicago truncatula]
          Length = 809

 Score =  295 bits (755), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 214/612 (34%), Positives = 314/612 (51%), Gaps = 61/612 (9%)

Query: 15  MGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLE-HLQKQMLSTTLSE---KL 70
           M GIGKTT+A+ +F +   ++E   F+++VR  SE  G     L+K +LST L E   K 
Sbjct: 1   MPGIGKTTIAEEVFRRLRSKYESCYFMANVREESERCGTNSLRLRKIILSTLLKEENLKD 60

Query: 71  EVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLE 130
           E+    +P   K+R+ RMK+LIVLDD+ +  QL+ LIG +D  G  SRI++TTRDK+VL 
Sbjct: 61  ELIN-GLPPLVKKRLHRMKVLIVLDDIKDAEQLEVLIGTVDWLGPRSRIIITTRDKQVLA 119

Query: 131 KFRGEEKKIYRVNGLEFEEAFEHFCNFAF-KENHCPEDLNWHSRSVVSYTKGNPLVLEVL 189
              G+   IY V  L+  E+F+ F   AF K  H   +    S+ +V YT G PLVL+ L
Sbjct: 120 ---GKVDDIYEVEPLDSAESFQLFNLHAFTKHEHLEMEYYELSKKMVDYTAGVPLVLKAL 176

Query: 190 GSSLCLKRKSHW---GKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFE 246
            + LC K K  W    K+L         +I +++ + ++ +  L    K+I LDIACFF+
Sbjct: 177 ANLLCGKDKDIWESQAKILKI------EQIENVHVVFRLIYTNLDSHEKNILLDIACFFD 230

Query: 247 GEDKDFVASILDD-----SESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESE 300
           G         L       S S  LD L DK+LV+IS  + ++MHDI+QE   +IVRQES 
Sbjct: 231 GLKLKLDLIKLLLKDRHYSVSTKLDRLKDKALVTISQQSIVSMHDIIQETAWEIVRQESV 290

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
           +EPG RSRL +P +I  VLK +KG +AI  + + LS+IK ++L PR F  MS L+    Y
Sbjct: 291 EEPGSRSRLLNPDDIYHVLKDDKGGEAIRSMAIRLSEIKELHLSPRVFAKMSKLKFLDIY 350

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                         T    +  ++ LP GL++LP +LRYL W+ YPL +LPS F  +NLV
Sbjct: 351 --------------TNGSQNEGRLSLPRGLEFLPNELRYLRWEYYPLESLPSKFSAENLV 396

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
            L+L  S++++ W G K  V         L+ L       L   P          IN   
Sbjct: 397 RLSLPYSRLKKLWNGVKDIVN--------LNVLILSSSTFLTELPDFSKAASLEVINLRL 448

Query: 481 CVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS 540
           C+  ++             G  ++  + S+   L+ L  L L  C  +K  S +   +  
Sbjct: 449 CLKELDLS-----------GCISLTSLQSNDTHLSSLRYLSLYNCTSVKEFSVTSKHM-- 495

Query: 541 LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
              ++ L   ++++ P  +     L+++Y   T I  LP S  NL  L  L +  CS+L 
Sbjct: 496 --NILDLEGTSIKNLPSSIGLQTKLEKLYLAHTHIQSLPKSIRNLTRLRHLDLHLCSELQ 553

Query: 601 NLPDNIGSLEYL 612
            LP+   SLE L
Sbjct: 554 TLPELAQSLEIL 565



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 21/210 (10%)

Query: 547 LGCLNLEHFPEILEKM------EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
           L  L  E++P  LE +      E+L R+    + + +L +  +++  L VL +   + L 
Sbjct: 373 LRYLRWEYYP--LESLPSKFSAENLVRLSLPYSRLKKLWNGVKDIVNLNVLILSSSTFLT 430

Query: 601 NLPD--NIGSLEYLYYIL-------AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
            LPD     SLE +   L       +   +++ L S+    + LR L   +C  ++ F  
Sbjct: 431 ELPDFSKAASLEVINLRLCLKELDLSGCISLTSLQSNDTHLSSLRYLSLYNCTSVKEFSV 490

Query: 652 TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
           T       M +L +   +++ +P  I   + LE LYL+  + +SLP  I+ +++LR + L
Sbjct: 491 TS----KHMNILDLEGTSIKNLPSSIGLQTKLEKLYLAHTHIQSLPKSIRNLTRLRHLDL 546

Query: 712 EDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
              + LQ+LPEL   L+ L    C  L+++
Sbjct: 547 HLCSELQTLPELAQSLEILDACGCLSLENV 576



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 159/368 (43%), Gaps = 57/368 (15%)

Query: 646 LESFPRTFLLGLSAMGLLHIS-DYA-VREIPQEIAYLSSLEILYLSGNNF-ESLPAIIKQ 702
           LES P  F    SA  L+ +S  Y+ ++++   +  + +L +L LS + F   LP   K 
Sbjct: 383 LESLPSKF----SAENLVRLSLPYSRLKKLWNGVKDIVNLNVLILSSSTFLTELPDFSKA 438

Query: 703 MSQLRFIHLEDFNMLQSLPELPLC-----------------LKYLHLIDCKMLQSLPVLP 745
            S      LE  N+   L EL L                  L+YL L +C  ++   V  
Sbjct: 439 AS------LEVINLRLCLKELDLSGCISLTSLQSNDTHLSSLRYLSLYNCTSVKEFSVTS 492

Query: 746 FCLESLDLTGCNMLRSLPE---LPLCLQYLNLEDCNMLRSLPELP---LCLQLLTVRNCN 799
             +  LDL G + +++LP    L   L+ L L   + ++SLP+       L+ L +  C+
Sbjct: 493 KHMNILDLEGTS-IKNLPSSIGLQTKLEKLYLAHTH-IQSLPKSIRNLTRLRHLDLHLCS 550

Query: 800 RLQSLPEILLCLQELDAS---VLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKAN 856
            LQ+LPE+   L+ LDA     LE ++  S     A E LK       F NCLKLN  + 
Sbjct: 551 ELQTLPELAQSLEILDACGCLSLENVAFRST----ASEQLKEKRKRVIFWNCLKLNEPSL 606

Query: 857 NKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFS-NQSSGSSI 915
             I  ++  +I  M+ +   +      ++       S+ V PGSEIP+W   + ++   I
Sbjct: 607 KAIELNA--QINMMSFSYQHISTWDRDHDHNHNHNHSIYVYPGSEIPEWLEYSTTTHDYI 664

Query: 916 CIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKT-LS------ETKH 968
            I L        L GF F  ++ +   +    +   +S   D  IK  LS      E+ H
Sbjct: 665 TIDLSSAPYFSKL-GFIFGFIIPTNSSEGQIVK-LKISDGQDKGIKMYLSRPRRGIESDH 722

Query: 969 VDLGYNSR 976
           V L Y+ R
Sbjct: 723 VYLMYDRR 730


>gi|342365839|gb|AEL30372.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1061

 Score =  295 bits (755), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 230/709 (32%), Positives = 334/709 (47%), Gaps = 124/709 (17%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+  GIWGMGG+GKTT+A+AI++    +F+ SCF++++R   ET G L+ LQK      L
Sbjct: 217 VRFTGIWGMGGVGKTTIARAIYEAIEDQFQISCFLANIRDTCETNGILQ-LQK-----IL 270

Query: 67  SEKLEVAGPNIPH-FTKERVRR-----MKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            E + V+     + +   R+ R      K+LIVLDDVN+V QL+ L G  D FG GSR++
Sbjct: 271 GEHIHVSRCTFSNLYDGMRIIRNSLCNKKVLIVLDDVNDVSQLENLAGNQDWFGPGSRVM 330

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRD  +L+    E    Y V  L+  EA   FC+ AFK +   E     S  VV YT 
Sbjct: 331 ITTRDMHLLKTH--EVCDTYEVECLDKTEALRFFCSKAFKRDVPEEGYLEMSHEVVKYTG 388

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL L+VLGS L  +  S W   +  L  + +++I    + L+IS++ L    K IFLD
Sbjct: 389 GLPLALKVLGSYLYGRNISAWRSAVKKLRSVSDAKI---LETLRISYDGLDSMQKEIFLD 445

Query: 241 IACFFEGEDKDFVASILD----DSESDVLDILIDKSLVSISGNF---------LNMHDIL 287
           IACFF+G+ KD V  + +    + + D+ D+LI++SLV++  +          L MHD+L
Sbjct: 446 IACFFKGKPKDKVLDLFEKRGYNPQIDI-DVLIERSLVTVKQDIDVFKKKFDVLEMHDLL 504

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDP-- 345
           QEMGR  V QES   P KRSRLW P+++  +L  NKGT+ I+ I L         ++   
Sbjct: 505 QEMGRNFVIQESPNYPSKRSRLWSPEDLDLMLTQNKGTETIQSIVLPPIGNGTYYVESWR 564

Query: 346 -RAFTNMSNLRLFKF-YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWD 403
            +AF NMS L+   F +V     I                         +P  L+ LHW+
Sbjct: 565 DKAFPNMSQLKFLNFDFVRAHIHIN------------------------IPSTLKVLHWE 600

Query: 404 TYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK----------AC-------------- 439
             PL TLP   +   LVE+ +  S + Q W G K          +C              
Sbjct: 601 LCPLETLPLVDQRYELVEIKISWSNIVQLWHGFKFLEKLKHLDLSCSGLEQTPDLSGVPV 660

Query: 440 --------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLI 485
                         +  S+   K L  L+   C SL +FP  L       +N   C + +
Sbjct: 661 LETLDLSCCHCLTLIHPSLICHKSLLVLNLWECTSLETFPGKLEMSSLKELNLCDCKSFM 720

Query: 486 ---EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLV 542
              EF +   K++RL     AI E+P S+ CL  L  LDLRGCK+L  +  S  +L SL 
Sbjct: 721 SPPEFGECMTKLSRLSFQDMAISELPISLGCLVGLSELDLRGCKKLTCLPDSIHELESLR 780

Query: 543 TLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS-KLDN 601
            L    C                       + + +LP S   +P L +L + DC    ++
Sbjct: 781 ILRASSC-----------------------SSLCDLPHSVSVIPFLSILDLRDCCLTEES 817

Query: 602 LPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
            P + G    L  +  + +    LP S+     L+ L  + CK L+S P
Sbjct: 818 FPCDFGQFPSLTDLDLSGNHFVNLPISIHELPKLKCLSLNGCKRLQSLP 866



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 171/440 (38%), Gaps = 91/440 (20%)

Query: 550 LNLEHFPEILEKMEHLKRIYS--DRTPITELPSSFENLPGLEVLFVEDCSKLDNL-PDNI 606
           + L H  + LEK++HL    S  ++TP          +P LE L +  C  L  + P  I
Sbjct: 627 VQLWHGFKFLEKLKHLDLSCSGLEQTP------DLSGVPVLETLDLSCCHCLTLIHPSLI 680

Query: 607 GSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHIS 666
                L   L   +++   P  + +S+ L+ L+   CK   S P  F   ++ +  L   
Sbjct: 681 CHKSLLVLNLWECTSLETFPGKLEMSS-LKELNLCDCKSFMS-PPEFGECMTKLSRLSFQ 738

Query: 667 DYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
           D A+ E+P  +  L  L  L L G      LP  I ++  LR +     + L  LP    
Sbjct: 739 DMAISELPISLGCLVGLSELDLRGCKKLTCLPDSIHELESLRILRASSCSSLCDLPHSVS 798

Query: 726 CLKYLHLID----CKMLQSLPV----LPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDC 777
            + +L ++D    C   +S P      P  L  LDL+G N   +LP              
Sbjct: 799 VIPFLSILDLRDCCLTEESFPCDFGQFP-SLTDLDLSG-NHFVNLP-------------- 842

Query: 778 NMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLK 837
               S+ ELP  L+ L++  C RLQSLPE+   ++EL A              W  +SL 
Sbjct: 843 ---ISIHELPK-LKCLSLNGCKRLQSLPELPSSIRELKA--------------WCCDSLD 884

Query: 838 SAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVL 897
           + +               NN   A S+        AS   G    +           +V+
Sbjct: 885 TRSF--------------NNLSKACSVF-------ASTSQGPGEVLQ----------MVI 913

Query: 898 PGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFD 957
           PG+ IP WF ++   + + +  P H      +G A C ++   +      R+F +S +  
Sbjct: 914 PGTNIPSWFVHRQESNCLLVPFPHHCHPSERLGIALCFLVRPSE------RWFSLSLRLA 967

Query: 958 LEIKTLSETKHVDLGYNSRY 977
           +       T  + + Y+  Y
Sbjct: 968 VGNGDRVITNSIPIWYHQGY 987


>gi|357499511|ref|XP_003620044.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495059|gb|AES76262.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1301

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 238/747 (31%), Positives = 362/747 (48%), Gaps = 135/747 (18%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S D V +VG++G GG+GK+TLAKAI++  + +FE SCF+ +VR NS  +  L+HLQ+++L
Sbjct: 217 SDDGVHMVGLYGTGGLGKSTLAKAIYNFIADQFECSCFLENVRENS-ASNKLKHLQEELL 275

Query: 63  STTLSEKLEVAG--PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             TL  ++++ G    I H  KER+  MK+L++LDDV+++GQL+ L GE D FG GSR++
Sbjct: 276 LKTLQLEIKLGGVSEGISHI-KERLHSMKILLILDDVDDMGQLQALAGEPDWFGLGSRVI 334

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRD+ +L     E K  Y + GL   EA E     AFK N  P          VSY  
Sbjct: 335 ITTRDRHLLTSHDIERK--YALEGLCRTEALELLRWMAFKNNKVPSVYEDVLNRAVSYAS 392

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PLVLEV+GS+L  KR   W   L    +I   +IH   +ILK+S++ L    +S+FLD
Sbjct: 393 GLPLVLEVVGSNLFGKRIEEWKGTLEGYEKIPNKKIH---EILKVSYDALEEEQQSVFLD 449

Query: 241 IACFFEGEDKDFVASILDDSESDV----LDILIDKSLVSI----SGNF--LNMHDILQEM 290
           IAC F+G   + V  IL           L +L +KSLV I    SG+   + +H+++++M
Sbjct: 450 IACCFKGCGLEVVEDILRAHYGHCITHHLGVLAEKSLVQICTYHSGSIYKVTLHNLIEDM 509

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFT 349
           G+++VRQES KEPG+RSRLW   +I  VL  N GT  IE I L+   ++  I  + +A  
Sbjct: 510 GKEVVRQESPKEPGERSRLWCQDDIVHVLTENTGTRNIEMIHLNCPSMENVIEWNGKAMK 569

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
            M+NL+                       L     Q   G DYLP  LR+  W+  P ++
Sbjct: 570 KMTNLK----------------------TLIIENGQFSRGPDYLPSSLRFCKWNGCPSKS 607

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLH 469
           L S                          C+ +  + F Y+  L    CQ L   P    
Sbjct: 608 LSS--------------------------CILN--KKFNYMKVLKLNSCQYLTQIPDVSG 639

Query: 470 FVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
                 ++F +C NLI                     + +S+  L  LE+LD + C +L+
Sbjct: 640 LPNLEKLSFQFCENLI--------------------TIHNSVGFLNRLEILDAKYCIKLQ 679

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
            +     +L  L  L L  C +L+ FPE+L KM +LK I+ + T + E P S +NL  L+
Sbjct: 680 SVPP--LQLPCLKRLELAMCKSLKSFPELLCKMTNLKDIWLNETCM-EFPFSIQNLSELD 736

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            L +  C  L   P     +                 +S+  SN+      +H +  +S 
Sbjct: 737 RLQIYQCGML-RFPKQNDKM-----------------NSIVFSNV------NHLRIEKS- 771

Query: 650 PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
                         ++SD  +R +   + +  ++E L LS +NF+ LP  + +   L+ I
Sbjct: 772 --------------NLSDEFLRIL---LMWCVNVENLVLSESNFKILPECLSECHLLKNI 814

Query: 710 HLEDFNMLQSLPELPLCLKYLHLIDCK 736
           +++    L+ +   P  LK  H  DC+
Sbjct: 815 YVDGCKFLEEIRGFPPNLKIFHAKDCE 841


>gi|357499601|ref|XP_003620089.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495104|gb|AES76307.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1079

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 250/754 (33%), Positives = 373/754 (49%), Gaps = 111/754 (14%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S+  VQ++GI+G GG+GKTTLA+A+++  + +F+  CF+ DVRGNS   G LEHLQ ++L
Sbjct: 219 SNGEVQMLGIYGPGGMGKTTLARAVYNSLADQFDDLCFLHDVRGNSAKYG-LEHLQGKLL 277

Query: 63  S--TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           S    L  KL      IP   ++R+ + KL +             L G    FG GS ++
Sbjct: 278 SKLVKLDIKLGDVYEGIP-IIEKRLHQKKLEV-------------LAGGFRWFGPGSIVI 323

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK++L     E  + Y+++ L  +EA E     A K N    + +      V+Y  
Sbjct: 324 ITTRDKQLLAHHGIE--RAYKLHKLNEKEALELLTWKALKNNKVDTNFDSVLHHAVTYAS 381

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL LEV+GS+L  K    W   L+   RI + +I +I   LK+SF+ L    +++FLD
Sbjct: 382 GLPLALEVVGSNLFGKNIGEWKSALNQYERIPDKKIQEI---LKVSFDALGEAEQNVFLD 438

Query: 241 IACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSIS------GNFLNMHDILQEM 290
           IAC F+G    E +D + +   +     + +L+DKSL++I        + + +H ++++M
Sbjct: 439 IACCFKGYELKELEDVLHAHYGNCMKYQIRVLLDKSLLNIKQCQWSLTDVVTLHALIEKM 498

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
           G++IVR+ES KEPG+RSRLW  K+I  VL+ NKG+  IE I+L+ S  + + +D +    
Sbjct: 499 GKEIVRKESPKEPGRRSRLWFHKDIIDVLEANKGSSEIEIIYLECSSSEKVVVDWKG--- 555

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
                          E+EK+  + T   L        NG  YLP  LR L W  YP R +
Sbjct: 556 --------------DELEKMQKLKT---LIVKNGTFSNGPKYLPNSLRVLEWQKYPSRVI 598

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
           PS+F  +N +  N   SKV        +CV      F  +  L+   CQ    F + +H 
Sbjct: 599 PSDFSQRNFLYANY--SKVTLH---HLSCV-----RFVNMRELNLDNCQ----FLTRIHD 644

Query: 471 VCPVT----INFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCK 526
           V  ++     +F  C NLI                    E+  S+  L  LEVL+  GC 
Sbjct: 645 VSNLSNLEIFSFQQCKNLI--------------------EIHKSVGFLNKLEVLNAEGCS 684

Query: 527 RLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLP 586
           +L  +S    KL SL  L L  C NL +FPEIL +M ++KRI  + T I E+P SF+NL 
Sbjct: 685 KL--MSFPPLKLTSLDELRLSDCKNLNNFPEILGEMNNIKRICWENTSIKEVPVSFQNLT 742

Query: 587 GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
            L  L ++    +  LP +I  +  L  I A      +L     LS+ML +         
Sbjct: 743 KLLYLTIKG-KGMVRLPSSIFRMPNLSDITAEGCIFPKLDDK--LSSMLTT--------- 790

Query: 647 ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
            S  R + + L +  L   SD     +P  + + + + IL LSGNNF  LP  IK    L
Sbjct: 791 -SPNRLWCITLKSCNL---SD---EFLPIFVMWSAYVRILDLSGNNFTILPECIKDCHLL 843

Query: 707 RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
             + L+D   L+ +  +PL L  L   +CK L S
Sbjct: 844 SDLILDDCKCLREIRGIPLNLTNLSAANCKSLTS 877



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 130/295 (44%), Gaps = 39/295 (13%)

Query: 540 SLVTLILLGCLNLEHFPEI-LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
           S VTL  L C+   +  E+ L+  + L RI+              NL  LE+   + C  
Sbjct: 613 SKVTLHHLSCVRFVNMRELNLDNCQFLTRIHD-----------VSNLSNLEIFSFQQCKN 661

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS---SHCKGLESFPRTFLL 655
           L  +  ++G L  L  +   A   S+L S   L   L SLD    S CK L +FP   +L
Sbjct: 662 LIEIHKSVGFLNKLEVL--NAEGCSKLMSFPPLK--LTSLDELRLSDCKNLNNFPE--IL 715

Query: 656 G-LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR------- 707
           G ++ +  +   + +++E+P     L+ L  L + G     LP+ I +M  L        
Sbjct: 716 GEMNNIKRICWENTSIKEVPVSFQNLTKLLYLTIKGKGMVRLPSSIFRMPNLSDITAEGC 775

Query: 708 -FIHLED--FNMLQSLPELPLC--LKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSL 762
            F  L+D   +ML + P    C  LK  +L D + L    +    +  LDL+G N    L
Sbjct: 776 IFPKLDDKLSSMLTTSPNRLWCITLKSCNLSD-EFLPIFVMWSAYVRILDLSG-NNFTIL 833

Query: 763 PE-LPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL 814
           PE +  C  L  L L+DC  LR +  +PL L  L+  NC  L S    +L  Q+L
Sbjct: 834 PECIKDCHLLSDLILDDCKCLREIRGIPLNLTNLSAANCKSLTSSCRNMLLNQDL 888


>gi|357456941|ref|XP_003598751.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355487799|gb|AES69002.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1082

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 214/607 (35%), Positives = 301/607 (49%), Gaps = 92/607 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           K+T A+A+ +  + +FE  CF++ +R  +    GL HLQ+ +LS  L EK    G     
Sbjct: 268 KSTTARAVHNLIADQFESVCFLAGIRERA-INHGLAHLQETLLSEILGEKDIKVGDVYRG 326

Query: 80  FT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
            +  K R++R K+L++LDDV++V  L+ L G  D FG G++I++TTRDK +L        
Sbjct: 327 ISIIKRRLQRKKVLLILDDVDKVEHLRALAGGHDWFGLGTKIIITTRDKHLLATH--GIV 384

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENH---CPEDLNWHSRSVVSYTKGNPLVLEVLGSSLC 194
           K+Y+V  L  E+AFE F   AFK      C  D+   ++  VSY  G PL LEV+GS L 
Sbjct: 385 KVYKVKELNNEKAFELFSWHAFKNKKIDPCYVDI---AKRAVSYCHGLPLALEVIGSHLF 441

Query: 195 LKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVA 254
            K    W  +L    R+   +IH+    LK+S++ L    K IFLDIACFF      +V 
Sbjct: 442 GKSLDVWKSLLDKYERVLRKDIHET---LKVSYDDLDEDEKGIFLDIACFFNSYKIGYVK 498

Query: 255 SIL---DDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQESEKEPGKRSRLW 310
            IL        D + +L DKSL+ I  N  + MHD++Q MGR+IVRQES  EPG+RSRLW
Sbjct: 499 EILYLHGFHADDGIQVLTDKSLIKIDANSCVRMHDLIQGMGREIVRQESTLEPGRRSRLW 558

Query: 311 DPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
              +I  VL+ NKGTD IE I  +L K + +    +AF  M NLR+      +F      
Sbjct: 559 FSDDIVHVLEENKGTDTIEVIIANLCKDRKVKWCGKAFGQMKNLRILIIRNARF------ 612

Query: 371 PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
                             G   LP  LR L W  +   +LPS+F PKNLV L+LR     
Sbjct: 613 ----------------SRGPQILPNSLRVLDWSGHESSSLPSDFNPKNLVLLSLR----- 651

Query: 431 QPWEGEKACVPSSIQNFKYLSA------LSFKGCQSLRSFPS-----NLHFVCPVTINFS 479
                      S ++ FK L+       L F+ C+ L   PS     NL  +C       
Sbjct: 652 ----------ESCLKRFKLLNVFETLIFLDFEDCKFLTEIPSLSRVPNLGSLC-----LD 696

Query: 480 YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
           YC NL                      +  S+  L  L +L  + C +L+ +      L 
Sbjct: 697 YCTNLF--------------------RIHDSVGFLDKLVLLSAKRCIQLQSLVPCM-NLP 735

Query: 540 SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
           SL TL L GC  LE FPE+L  ME++K +Y D T + +LP +  NL GL+ LF+  C ++
Sbjct: 736 SLETLDLTGCSRLESFPEVLGVMENIKDVYLDGTNLYQLPVTIGNLVGLKRLFLRSCQRM 795

Query: 600 DNLPDNI 606
             +P  +
Sbjct: 796 IQIPSYV 802



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 569 YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSS 628
           + D   +TE+PS    +P L  L ++ C+ L  + D++G L+ L  +L +A    QL S 
Sbjct: 672 FEDCKFLTEIPS-LSRVPNLGSLCLDYCTNLFRIHDSVGFLDKL--VLLSAKRCIQLQSL 728

Query: 629 VALSNM--LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL 686
           V   N+  L +LD + C  LESFP   +LG+                      + +++ +
Sbjct: 729 VPCMNLPSLETLDLTGCSRLESFPE--VLGV----------------------MENIKDV 764

Query: 687 YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
           YL G N   LP  I  +  L+ + L     +  +P   L
Sbjct: 765 YLDGTNLYQLPVTIGNLVGLKRLFLRSCQRMIQIPSYVL 803



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 96/241 (39%), Gaps = 64/241 (26%)

Query: 681 SSLEILYLSGNNFESLPA---------------------IIKQMSQLRFIHLEDFNMLQS 719
           +SL +L  SG+   SLP+                     ++     L F+  ED   L  
Sbjct: 621 NSLRVLDWSGHESSSLPSDFNPKNLVLLSLRESCLKRFKLLNVFETLIFLDFEDCKFLTE 680

Query: 720 LPELP-------LCLKY-------------------LHLIDCKMLQSL-PVLPF-CLESL 751
           +P L        LCL Y                   L    C  LQSL P +    LE+L
Sbjct: 681 IPSLSRVPNLGSLCLDYCTNLFRIHDSVGFLDKLVLLSAKRCIQLQSLVPCMNLPSLETL 740

Query: 752 DLTGCNMLRSLPELPLCLQYLNLEDCNM-LRSLPELPLC------LQLLTVRNCNRLQSL 804
           DLTGC+ L S PE+   ++  N++D  +   +L +LP+       L+ L +R+C R+  +
Sbjct: 741 DLTGCSRLESFPEVLGVME--NIKDVYLDGTNLYQLPVTIGNLVGLKRLFLRSCQRMIQI 798

Query: 805 PEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICF------EFTNCLKLNGKANNK 858
           P  +L   E+  S   +  + S   +     + + A+C        F N   LN  +NN 
Sbjct: 799 PSYVLPKVEIVISHHRRAVRSSNYAEKVSPKVSTNAMCVYNEYGKSFLNVYSLNVSSNNV 858

Query: 859 I 859
           I
Sbjct: 859 I 859


>gi|8843883|dbj|BAA97409.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1018

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 223/659 (33%), Positives = 328/659 (49%), Gaps = 101/659 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFD-QFSHEFEGSCFVSDVRGNSETAGGLEH-----L 57
           SD V+++GIWG  GIGKTT+A+A+FD + S  F+  CF+ +++G+    G  +H     L
Sbjct: 161 SDEVKMIGIWGPAGIGKTTIARALFDDRLSSSFQHKCFMGNLKGS--IKGVADHDSKLRL 218

Query: 58  QKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           QKQ+LS    E+       I H    +ER+   ++LI+LDDV+++ QL+ L  E+  FG 
Sbjct: 219 QKQLLSKIFKEE----NMKIHHLGAIRERLHDQRVLIILDDVDDLKQLEVLAKEISWFGS 274

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           GSRI+ TT DK++L K  G    IYRV+    ++A E  C  AFK++  P+     +  V
Sbjct: 275 GSRIIGTTEDKKIL-KAHGIHN-IYRVDFPSKKDALEILCLSAFKQSSIPDGFEELANKV 332

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
                  PL L V+G+SL  +    W ++L   +RI  S   DI DIL+I +++L    K
Sbjct: 333 AKLCSNLPLGLCVVGASLRGEGNQEWERLL---SRIESSLDRDIDDILRIGYDRLLTNDK 389

Query: 236 SIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG----NFLNMHDILQ 288
           S+FL IACFF     D V ++L DS  DV    + L D+SL++ S       + MH +LQ
Sbjct: 390 SLFLHIACFFNYAKVDNVTALLADSNLDVGNGFNTLADRSLINFSCILPYGRIEMHHLLQ 449

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
           ++GRQIV ++S KEPGKR  + +P+EI  VL +  GT ++ GI  D S I  +++   AF
Sbjct: 450 QLGRQIVLEQS-KEPGKREFIIEPEEIRDVLTNETGTGSVIGISFDTSNIGEVSVSKDAF 508

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M NLR  + Y     E+                +Q+P  +DY+P+ LR L+WD YP +
Sbjct: 509 EGMRNLRFLRIYRLLGGEV---------------TLQIPEDMDYIPR-LRLLYWDRYPRK 552

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEG------------------------EKAC----- 439
           +LP  FKP+ LVEL++  S +E  W G                         KA      
Sbjct: 553 SLPRRFKPERLVELHMPRSNLELLWGGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERL 612

Query: 440 ----------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
                     +PSSI N   L  L  K C  L+  P+N++      ++ S C  L  FP 
Sbjct: 613 TLESCLSLVELPSSISNLHKLEILDVKFCSMLQVIPTNINLASLERLDVSGCSRLRTFPD 672

Query: 490 ISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDL--RGCKRLKRISTSFCKLRSLVTLILL 547
           IS  +  L  G   IE+VP S+ C + L+ L +  R  KRL  +          +TL+ L
Sbjct: 673 ISSNIKTLIFGNIKIEDVPPSVGCWSRLDQLHISSRSLKRLMHVPPC-------ITLLSL 725

Query: 548 GCLNLEHFPEILEKMEHLKRIYSDR----TPITELPSSFENLPGLEVLFVEDCSKLDNL 602
               +E   + +  +  L  +  D       I  LPSS      L+VL   DC  L  +
Sbjct: 726 RGSGIERITDCVIGLTRLHWLNVDSCRKLKSILGLPSS------LKVLDANDCVSLKRV 778



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 158/416 (37%), Gaps = 121/416 (29%)

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF--------------- 582
           LR L    LLG       PE ++ +  L+ +Y DR P   LP  F               
Sbjct: 514 LRFLRIYRLLGGEVTLQIPEDMDYIPRLRLLYWDRYPRKSLPRRFKPERLVELHMPRSNL 573

Query: 583 -------ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
                  E LP L+++ +    +L  +P+   +       L +  ++ +LPSS++  + L
Sbjct: 574 ELLWGGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLESCLSLVELPSSISNLHKL 633

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFE 694
             LD   C  L+  P                             L+SLE L +SG +   
Sbjct: 634 EILDVKFCSMLQVIPTNI-------------------------NLASLERLDVSGCSRLR 668

Query: 695 SLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC---LKYLHLIDCKMLQSLPVLPFCLESL 751
           + P I   +  L F +++    ++ +P    C   L  LH I  + L+ L  +P C+  L
Sbjct: 669 TFPDISSNIKTLIFGNIK----IEDVPPSVGCWSRLDQLH-ISSRSLKRLMHVPPCITLL 723

Query: 752 DLTGCNMLRSLPELPLC------LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLP 805
            L G  + R    +  C      L +LN++ C  L+S+  LP  L++L   +C  L+ + 
Sbjct: 724 SLRGSGIER----ITDCVIGLTRLHWLNVDSCRKLKSILGLPSSLKVLDANDCVSLKRV- 778

Query: 806 EILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLL 865
                          + S H+P                +F NCLKL+ +A   I+  S+ 
Sbjct: 779 ---------------RFSFHNP------------MHTLDFNNCLKLDEEAKRGIIQRSVS 811

Query: 866 RIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
           R                            I LP  +IP+ F+++++G SI I L P
Sbjct: 812 R---------------------------YICLPCKKIPEEFTHKATGKSITIPLAP 840


>gi|13517483|gb|AAK28812.1|AF310968_1 resistance-like protein PH-B [Linum usitatissimum]
          Length = 1202

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 260/847 (30%), Positives = 399/847 (47%), Gaps = 158/847 (18%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEG--SCFVSDVRGNSETAGGLEHLQ 58
            MD  D   I+G+WGMGG+GKTTLA+A +D+ +   +G    FV +V    E   G+E + 
Sbjct: 211  MDKLDDTCIIGLWGMGGVGKTTLAEACYDRVTSSNKGIKHLFVRNVNEICEKHHGVEKIV 270

Query: 59   KQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRL----IGELDQ- 112
             ++ S  L E  ++    NI  + +ER+  +++ +VLD+V  + QL++L    +  L + 
Sbjct: 271  HKLYSKLLDENNIDREDLNIA-YRRERLSHLRVFVVLDNVETLEQLEQLALGYVFNLSKV 329

Query: 113  FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNW-- 170
            F  GSRI++TTR+K+VL+       KIY V  L  EE+   F   AFK++  P+D NW  
Sbjct: 330  FAAGSRIIITTRNKKVLQNAMA---KIYNVECLNDEESTRLFSLHAFKQDR-PQD-NWMG 384

Query: 171  HSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
             SR   SY KGNPL L++LG +L  +   +W  +L  L    +S    +  IL+ S++KL
Sbjct: 385  KSRLATSYCKGNPLALKILGGALFGEDVHYWRSLLTGLR---QSGNLGMETILRRSYDKL 441

Query: 231  TPRVKSIFLDIACFFEGEDK----DFVASILDDSESDVLDILIDKSLV----SISGNFLN 282
                K IFLD+AC   G  K    D++A++   S   V D LIDKSL+    S +G  + 
Sbjct: 442  GKEEKKIFLDVACLLNGMSKSRLIDYMATMYSSSYVKVKD-LIDKSLLTCVPSENGEMIE 500

Query: 283  MHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLK---------------------- 320
            +H +L+EM   IV++E +   GKRSRL DP ++ ++L                       
Sbjct: 501  VHGLLKEMAWNIVKEEPKL--GKRSRLVDPDDVHKLLSTSEVKNWSTSIVNLFKGIVMVI 558

Query: 321  -----------HNKGTDAI------EGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPK 363
                       H KG D +      EGI LDLSK K + L   AF  M++L   KF  P+
Sbjct: 559  PKRKKRKVTDMHQKGDDPLEEHRTTEGIRLDLSKTKEMYLKANAFEGMNSLTFLKFESPE 618

Query: 364  F-YEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
              Y   +L ++  +  L Y      +GL+ LP+ LR+L WD YP ++LP+ F P++LV L
Sbjct: 619  IEYPYYRLKNVKMKIHLPY------DGLNSLPEGLRWLQWDGYPSKSLPAKFYPQHLVHL 672

Query: 423  NLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
             +R S + + WEG                                   V  + ++  YC 
Sbjct: 673  IIRRSPIRRCWEGY-----------------------------DQPQLVNLIVLDLCYCA 703

Query: 483  NLIEFPQISGKVT---RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
            N+I  P IS  +     L  G  ++ EVP  ++ LT L  LD+  C+ LK +     KL 
Sbjct: 704  NIIAIPDISSSLNIEELLLFGCKSLVEVPFHVQYLTKLVTLDISHCENLKPLPP---KLD 760

Query: 540  S-LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL------------- 585
            S L+  + +  L +   PEI  +   L+      T + ELPS+  N+             
Sbjct: 761  SKLLKHVRMKNLEVTCCPEIDSR--ELEEFDLSGTSLGELPSAIYNIKQNGVLHLHGKNI 818

Query: 586  ---PGLEV--------------------------LFVEDCSKLDNLPDNIGSLEYLYYIL 616
               PG+                            L++ D  +L+ LP+ I ++      +
Sbjct: 819  TKFPGITTILKLFSLSETSIREIDLADYHQQHQNLWLTDNRQLEVLPNGIWNMISEQLWI 878

Query: 617  AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE 676
              +  I  LP      N L SL    C+ L S P T +  L ++G L +S+  ++ +P  
Sbjct: 879  GWSPLIESLPEISEPMNTLTSLHVYCCRSLTSIP-TSISNLRSLGSLCLSETGIKSLPSS 937

Query: 677  IAYLSSLEILYLS-GNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
            I  L  L ++ L    + ES+P  I ++S+L    +    ++ SLPELP  LK L +  C
Sbjct: 938  IQELRQLHMIELRYCESLESIPNSIHKLSKLVTFSMSGCEIIISLPELPPNLKELDVSRC 997

Query: 736  KMLQSLP 742
            K LQ+LP
Sbjct: 998  KSLQALP 1004


>gi|357499329|ref|XP_003619953.1| Resistance protein [Medicago truncatula]
 gi|355494968|gb|AES76171.1| Resistance protein [Medicago truncatula]
          Length = 1196

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 213/599 (35%), Positives = 302/599 (50%), Gaps = 86/599 (14%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           +S + V +VG++G GG+GK+TLAKAI++  + +FEG CF+ +VR NS     L+HLQK++
Sbjct: 215 ESDEGVHMVGLYGTGGLGKSTLAKAIYNFVADQFEGVCFLHNVRENS-AHNNLKHLQKEL 273

Query: 62  LSTTLSEKLEVAG--PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           LS T+   ++       IP   KER+ R K+L++LDDVN++ QL+ L G LD FG GSR+
Sbjct: 274 LSKTVKVNIKFGHICEGIP-IIKERLCRKKILLILDDVNQLDQLEALAGGLDWFGPGSRV 332

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TTRDK +L     E  + Y V GL   EA E     AFK N  P          VSY 
Sbjct: 333 IITTRDKHLLTCHGIE--RTYAVRGLYGTEALELLRWMAFKNNKVPPSYEDVLNRAVSYA 390

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            G PLVLE++GS+L  K    W   L    +I   +IH+I   LK+S++ L    +S+FL
Sbjct: 391 SGLPLVLEIVGSNLYGKSIEEWKGTLDGYEKIPNKKIHEI---LKVSYDALEEEQQSVFL 447

Query: 240 DIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
           DIAC F+G    E +D +        +  L +L +KSL+  +  +L +HD++++MG+++V
Sbjct: 448 DIACCFKGCRWEEFEDILRYHYGHCITHHLGVLAEKSLIYQNHGYLRLHDLIKDMGKEVV 507

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNL 354
           RQES KEPG++SRLW   EI  VLK N GT  IE I+++   ++  I+   +AF  M+ L
Sbjct: 508 RQESRKEPGEQSRLWCQDEIVHVLKENTGTSKIEMIYMNFHSMESVIDQKGKAFKKMTKL 567

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           +                     E   +SK     GL YLP  LR L W      +L S+ 
Sbjct: 568 KTLII-----------------ENGHFSK-----GLKYLPSSLRVLKWKGCLSESLSSSI 605

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             K                             F+ +  L+   C+ L   P         
Sbjct: 606 LSK----------------------------KFQNMKVLTLNCCEYLTHIPDVSDLQNLE 637

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
             +F +C NLI                     +  SI  L  LE LD   C +LKR    
Sbjct: 638 KFSFMFCKNLI--------------------TIDDSIGHLNKLESLDAGCCSKLKRFPP- 676

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
              L SL  L L GC +L++FPE+L KM ++K I+  RT I ELPSSF NL  L  L +
Sbjct: 677 -LGLTSLKQLELSGCESLKNFPELLCKMRNIKHIFLSRTSIGELPSSFHNLSELRSLHI 734


>gi|13517477|gb|AAK28810.1|AF310964_1 resistance-like protein P4-B [Linum usitatissimum]
          Length = 1202

 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 259/847 (30%), Positives = 400/847 (47%), Gaps = 158/847 (18%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEG--SCFVSDVRGNSETAGGLEHLQ 58
            MD  D   I+G+WGMGG+GKTTLA+A +++ +   +G    FV +V    E   G+E + 
Sbjct: 211  MDKLDDTFIIGLWGMGGVGKTTLAEACYERVTSSNKGIKHLFVRNVNEICEKHHGVEKIV 270

Query: 59   KQMLSTTLSE-KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRL----IGELDQ- 112
             ++ S  L E  ++    NI  + ++R+  +++ +VLD+V  + QL++L    +  L + 
Sbjct: 271  HKLYSKLLDENNIDREDLNIA-YRRQRLSHLRVFVVLDNVETLEQLEQLALGYVFNLSKV 329

Query: 113  FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
            F  GSRI++TTR+K+VL+       KIY V  L  +E+   F   AFK++  P+D NW  
Sbjct: 330  FAAGSRIIITTRNKKVLQNAMA---KIYNVECLNDKESIRLFSLHAFKQDR-PQD-NWTD 384

Query: 173  RS--VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
            +S    SY KGNPL L++LG +L  +   +W  +L  L    +S    +  IL+ S++KL
Sbjct: 385  KSHLATSYCKGNPLALKILGGALFGEDVHYWRSLLTGLR---QSGNLGMETILRRSYDKL 441

Query: 231  TPRVKSIFLDIACFFEGEDK----DFVASILDDSESDVLDILIDKSLV----SISGNFLN 282
                K IFLD+AC   G  K    D++A++   S   V D LIDKSL+    S +G  + 
Sbjct: 442  GKEEKKIFLDVACLLNGMSKSRLIDYMATMYSSSYVKVKD-LIDKSLLTCVPSENGEMIE 500

Query: 283  MHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLK---------------------- 320
            +HD+L+EM   IV++E +   GKRSRL DP ++ ++L                       
Sbjct: 501  VHDLLKEMAWNIVKEEPKL--GKRSRLVDPDDVHKLLSTSEVKNWSTSIVNLFKGIVMVI 558

Query: 321  -----------HNKGTDAI------EGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPK 363
                       H KG D +      EGI LDLSK K + L   AF  M++L   KF  P+
Sbjct: 559  PKRKKRKVTDMHQKGDDPLEEHRTTEGIRLDLSKTKEMYLKANAFEGMNSLTFLKFESPE 618

Query: 364  F-YEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
              Y   +L ++  +  L Y      +GL+ LP+ LR+LHWD YP ++LP+ F P++LV L
Sbjct: 619  MKYPHHRLKNVKMKIHLPY------DGLNSLPEGLRWLHWDAYPSKSLPAKFYPQHLVHL 672

Query: 423  NLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
             +R S + + WEG                                   V  + ++  YC 
Sbjct: 673  IIRRSPIRRCWEGY-----------------------------DQPQLVNLIVLDLCYCA 703

Query: 483  NLIEFPQISGKVTRLYLGQS---AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
            NLI  P IS  +    L      ++ EVPS ++ LT L  LD+  C+ LK +     KL 
Sbjct: 704  NLITIPDISSSLNLEELLLLRCVSLVEVPSHVQYLTKLVTLDISHCENLKPLPP---KLD 760

Query: 540  S-LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL------------- 585
            S L+  + +  L +   PEI  +   L+      T + ELPS+  N+             
Sbjct: 761  SKLLKHVRMKNLEITRCPEIDSR--ELEEFDLSGTSLGELPSAIYNVKQNGYLHLHGKNI 818

Query: 586  ---PGLEV--------------------------LFVEDCSKLDNLPDNIGSLEYLYYIL 616
               PG+                            L++ D  +L+ LP+ I ++      +
Sbjct: 819  TKFPGITTTLERFTLSGTSIREIDFADYHQQHQNLWLTDNRQLEVLPNGIWNMISEQLWI 878

Query: 617  AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE 676
              +  I  LP      N L SL    C+ L S P T +  L ++G L +S+  ++ +P  
Sbjct: 879  GWSPLIESLPEISEPMNTLTSLHVYCCRSLTSIP-TSISNLRSLGSLCLSETGIKSLPSS 937

Query: 677  IAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
            I  L  L    L    + ES+P  I ++S+L  + +    ++ SLPELP  LK L +  C
Sbjct: 938  IQELRQLHFFELRYCESLESIPNSIHKLSKLVTLSMSGCEIIISLPELPPNLKELDVSRC 997

Query: 736  KMLQSLP 742
            K LQ+LP
Sbjct: 998  KSLQALP 1004



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 27/229 (11%)

Query: 334  DLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYL 393
            +++K  GI      FT +S   + +     +++  +   ++   QL      LPNG+  +
Sbjct: 817  NITKFPGITTTLERFT-LSGTSIREIDFADYHQQHQNLWLTDNRQLEV----LPNGIWNM 871

Query: 394  PKKLRYLHWDTYPLRTLPSNFKPKN-LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSA 452
              +  ++ W    + +LP   +P N L  L++ C +           +P+SI N + L +
Sbjct: 872  ISEQLWIGWSPL-IESLPEISEPMNTLTSLHVYCCR-------SLTSIPTSISNLRSLGS 923

Query: 453  LSFKGCQSLRSFPSN------LHFVCPVTINFSYCVNLIEFPQISGKVTRLY-LGQSAIE 505
            L       ++S PS+      LHF         YC +L   P    K+++L  L  S  E
Sbjct: 924  LCLSET-GIKSLPSSIQELRQLHF-----FELRYCESLESIPNSIHKLSKLVTLSMSGCE 977

Query: 506  EVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
             + S  E   +L+ LD+  CK L+ + ++ CKL  L  +   GC  L+ 
Sbjct: 978  IIISLPELPPNLKELDVSRCKSLQALPSNTCKLLYLNLIHFEGCPQLDQ 1026


>gi|193584700|gb|ACF19650.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
          Length = 1098

 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 203/588 (34%), Positives = 310/588 (52%), Gaps = 66/588 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           ++ V ++G+WGMGGIGKTT+AKAI+++    FEG  F++++R       G  +LQ+Q++ 
Sbjct: 233 TNDVLLLGMWGMGGIGKTTVAKAIYNKIGRNFEGRSFIANIREVWGKDCGQVNLQEQLMY 292

Query: 64  TTLSE---KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
               E   K++     I      R+   ++L+VLDDVN++ QL  L G    F  GSRI+
Sbjct: 293 DIFKETTTKIQNVESGIS-ILNGRLCHKRVLLVLDDVNKLDQLNALCGSCKWFAPGSRII 351

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK +L   R +  KIY +  ++  E+ E F   AFK+    +D +  S +VV Y+ 
Sbjct: 352 ITTRDKHILRGNRVD--KIYIMKEMDESESLELFSWHAFKQARPSKDFSEISTNVVQYSG 409

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFL 239
             PL LEVLGS L  +  + W  VL  L RI   ++H     LKIS++ L     KSIFL
Sbjct: 410 RLPLALEVLGSYLFDREVTEWICVLEKLKRIPNDQVHQK---LKISYDGLNDDTEKSIFL 466

Query: 240 DIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSISG-NFLNMHDILQEMGRQIV 295
           DIACFF G D++ V  IL+ S   +++ + +L+++SLV++   N L MHD+L++MGR+I+
Sbjct: 467 DIACFFIGMDRNDVIHILNGSGFFAEIGISVLVERSLVTVDDKNKLGMHDLLRDMGREII 526

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           R++S  EP +RSRLW   ++  VL  + GT A+EG+ L +          + F NM  LR
Sbjct: 527 REKSPMEPEERSRLWFHDDVLDVLSEHTGTKAVEGLTLKMPCHSAQRFSTKTFENMKKLR 586

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
           L                      L  S VQL     Y+ + L++LHW+ +PLR +PSNF 
Sbjct: 587 L----------------------LQLSGVQLDGDFKYISRNLKWLHWNGFPLRCIPSNFY 624

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
            +N+V + L  S  +  W+         IQ  + L  L+      L   P          
Sbjct: 625 QRNIVSIELENSNAKLVWK--------EIQRMEQLKILNLSHSHHLTQTP---------- 666

Query: 476 INFSYCVNLIEFPQISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            +FSY  NL           +L L     + +V  SI  L  + +++L+ C  L  +  +
Sbjct: 667 -DFSYLPNL----------EKLVLEDCPRLSQVSHSIGHLKKVVLINLKDCISLCSLPRN 715

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
              L++L TLIL GCL ++   E LE+ME L  + ++ T IT++P S 
Sbjct: 716 IYTLKTLNTLILSGCLMIDKLEEDLEQMESLTTLIANNTGITKVPFSL 763


>gi|357469133|ref|XP_003604851.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505906|gb|AES87048.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1890

 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 205/588 (34%), Positives = 311/588 (52%), Gaps = 89/588 (15%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML---- 62
            V I+GIWGMGG GKTT+AKAI++Q   EFEG  F+ ++R   ET      LQ+++L    
Sbjct: 1064 VLILGIWGMGGTGKTTIAKAIYNQIGSEFEGRSFLLNIREFWETDTNQVSLQQKVLCDVY 1123

Query: 63   -STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             +T    +   +G NI    ++R+ + K+L VLDDVNE+ QLK L G  + FG GSRI++
Sbjct: 1124 KTTKFKIRDIESGKNI---LRQRLSQKKVLFVLDDVNELDQLKALFGSREWFGPGSRIII 1180

Query: 122  TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
            TTRD  +L+  R +E  +  +  ++  E+ E F   AFK+    ED   HS+ VVSY+ G
Sbjct: 1181 TTRDLHLLKSCRVDE--VCAIQDMDESESLELFSWHAFKQPTPTEDFATHSKDVVSYSGG 1238

Query: 182  NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFLD 240
                             + W KVL  L  I ++E+      LK+SF+ L     K IFLD
Sbjct: 1239 FA---------------TKWQKVLEKLRCIPDAEVQKK---LKVSFDGLKDVTEKHIFLD 1280

Query: 241  IACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSISG-NFLNMHDILQEMGRQIVR 296
            IACFF G D++ V  IL+     +D+ + +L+++SL+ I   N L MHD+L++MGRQI+ 
Sbjct: 1281 IACFFIGMDRNDVIQILNGCGFFADIGIKVLVERSLLIIDNRNKLRMHDLLRDMGRQIIY 1340

Query: 297  QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
            +ES  +P KR RLW  +E+  +L  NKGT+A++G+ L+  +   ++L+ +AF  M+ LRL
Sbjct: 1341 EESPSDPEKRGRLWRREEVFDILSKNKGTEAVKGLALEFPRKNTVSLNTKAFKKMNKLRL 1400

Query: 357  FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
                                  L  S VQL     YL  +LR+L W  +PL   P+ F+ 
Sbjct: 1401 ----------------------LQLSGVQLNGDFKYLSGELRWLSWHRFPLAYTPAEFQQ 1438

Query: 417  KNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI 476
             +L+ + L+ S ++Q W+  +      ++N K L                          
Sbjct: 1439 GSLIAITLKYSNLKQIWKKSQM-----LENLKIL-------------------------- 1467

Query: 477  NFSYCVNLIEFPQIS--GKVTRLYLGQS-AIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
            N S+  NLIE P  +    + +L L    ++  V  SI  L  L +++L  C  L+ +  
Sbjct: 1468 NLSHSQNLIETPDFTYLPNIEKLVLKDCPSLSTVSHSIGSLCKLLMINLTDCTGLQNLPR 1527

Query: 534  SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
            S  KL+SL TLIL GC  ++   E +E+ME L  + +D+T IT++P S
Sbjct: 1528 SIYKLKSLETLILSGCSKIDKLEEDVEQMESLTTLIADKTAITKVPFS 1575



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 151/304 (49%), Gaps = 34/304 (11%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE 68
           ++G+WGM GI K+T+A+AIF+Q    FE  C + +V    E   G   LQ ++L   +  
Sbjct: 586 LLGMWGMSGISKSTIAQAIFNQIGPYFEHKCNIDNVGEAWEQDNGQVSLQDELL-CFIGG 644

Query: 69  KLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
             E+  P++       KER++  ++L++L +V+++ QLK L G  D FG G +I++TT +
Sbjct: 645 ATEIKIPSVESGRIILKERLQHKRVLLLLYNVDKLEQLKALCGSRDWFGPGRKIIITTSN 704

Query: 126 KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
           + +L+                 E   +H         H  ++L+     +VSY  G P  
Sbjct: 705 RHLLK-----------------EHGVDHI--------HRVKELDNKFGKIVSYCGGLPFA 739

Query: 186 LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF 245
           L+ LG SL L     W  VL  + R    +   + + L+ S + L    K IF DIACFF
Sbjct: 740 LKELGMSLYLSEMLDWKTVLRRIERFSIPK-GSLLEALEKSLSDLYVEEKQIFFDIACFF 798

Query: 246 EGEDKDFVASILDDS-ESDVLDI--LIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEK 301
            G  ++ V   L+ S +   L I  L DKS V+I   N L MH +LQ M R I+ +ES  
Sbjct: 799 IGMSQNDVLQTLNRSIQRATLQINCLEDKSFVTIDENNKLQMHVLLQAMARDIINRESSN 858

Query: 302 EPGK 305
           +  +
Sbjct: 859 KTNQ 862



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 79/128 (61%), Gaps = 8/128 (6%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML-----S 63
           ++GIWGM GIGK+T+A+AI++Q    F+    + DV  + E   G   LQ ++L      
Sbjct: 230 LLGIWGMTGIGKSTIAEAIYNQIGPFFKHKYNIPDVMRSWEQDNGQVSLQDKLLCFICGE 289

Query: 64  TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
           T +  +   +G  I    KER++  ++L++LD+V+++ QLK L G  D FG GS+I++TT
Sbjct: 290 TEIKIRTVESGRVI---LKERLQHKRVLLLLDNVDKLEQLKALCGNRDWFGPGSKIIITT 346

Query: 124 RDKRVLEK 131
            ++++L +
Sbjct: 347 SNRQLLTQ 354


>gi|356532838|ref|XP_003534977.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1055

 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 227/665 (34%), Positives = 348/665 (52%), Gaps = 75/665 (11%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           + ++++G+WGMGGIGKT LA+ +F +    + G  F+++ R  S   G L  L++++ S 
Sbjct: 203 EDIRLIGLWGMGGIGKTILAEQVFIKLRSGYGGCLFLANEREQSRKHGMLS-LKEKVFSE 261

Query: 65  TLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
            L   +++  PN +P     R+ RMK+LIVLDDVN+   L++L+G L  FG GSRI+VTT
Sbjct: 262 LLGNGVKIDTPNSLPDDIVRRIGRMKVLIVLDDVNDSNHLEKLLGPLGNFGSGSRIIVTT 321

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH--SRSVVSYTKG 181
           RD +VL+  + +E  +Y +      +A E F N  F  N C +   +   S+ VV+Y KG
Sbjct: 322 RDMQVLKANKADE--VYPLREFSLNQALELF-NLNF-FNQCDDQREYDNLSKRVVNYAKG 377

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PLVL  L   L  + K  WG  L  L +I    + ++YD +K+S++ L P+ + IFLD+
Sbjct: 378 IPLVLNELAYLLRARNKEEWGSELDKLEKI---PLPEVYDRMKLSYDDLDPKEQQIFLDL 434

Query: 242 ACFF---EGEDK-DFVASIL-DDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEM 290
           A FF     E K D++ S+L  D ES      VL+ + DK+L++ S  NF++MHD LQ M
Sbjct: 435 AFFFGRSHTEIKVDYLKSLLKKDGESGDSVFIVLERMKDKALITSSKDNFISMHDSLQVM 494

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
            ++IVR++S    G  SRLWD  +I   +K++K T+AI  I ++L KIK   L    F  
Sbjct: 495 AQEIVRRKSS-NTGSHSRLWDLDDIHGEMKNDKVTEAIRSIQINLPKIKEQKLTHHIFAK 553

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           MS+L+  K              +S E+     ++ L   L +   +LR+L WD  PL++L
Sbjct: 554 MSSLKFLK--------------ISGEDNYGNDQLILAEELQFSASELRFLCWDHCPLKSL 599

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
           P +F  + LV L L  SK+E+ W+G        +QN   L  ++  G + L+  P     
Sbjct: 600 PKSFSKEKLVMLKLLRSKIEKLWDG--------VQNLVNLKEINLSGSEKLKELP----- 646

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                 + S   NL            L  G S +  V  S+  L  LE LDL GC  L  
Sbjct: 647 ------DLSKATNL---------EVLLLRGCSMLTSVHPSVFSLIKLEKLDLYGCGSLTI 691

Query: 531 IST-SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
           +S+ S C   SL  L L  C+NL  F  +   M+ L+  +   T + ELPSSFE    L+
Sbjct: 692 LSSHSIC---SLSYLNLERCVNLREFSVMSMNMKDLRLGW---TKVKELPSSFEQQSKLK 745

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
           +L ++  S ++ LP +  +L  L ++    S  S L +   L  +L++L++  C  L + 
Sbjct: 746 LLHLKG-SAIERLPSSFNNLTQLLHL--EVSNCSNLQTIPELPPLLKTLNAQSCTSLLTL 802

Query: 650 PRTFL 654
           P   L
Sbjct: 803 PEISL 807



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 175/420 (41%), Gaps = 88/420 (20%)

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLP 586
           LK +  SF K   LV L LL    +E   + ++ + +LK I  S    + ELP       
Sbjct: 596 LKSLPKSFSK-EKLVMLKLLRS-KIEKLWDGVQNLVNLKEINLSGSEKLKELPD-LSKAT 652

Query: 587 GLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKG 645
            LEVL +  CS L ++  ++ SL  L  + L    +++ L S    S  L  L+   C  
Sbjct: 653 NLEVLLLRGCSMLTSVHPSVFSLIKLEKLDLYGCGSLTILSSHSICS--LSYLNLERCVN 710

Query: 646 LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQ 705
           L    R F +    M  L +    V+E+P      S L++L+L G+  E LP+    ++Q
Sbjct: 711 L----REFSVMSMNMKDLRLGWTKVKELPSSFEQQSKLKLLHLKGSAIERLPSSFNNLTQ 766

Query: 706 LRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPEL 765
           L  +HLE                                        ++ C+ L+++PEL
Sbjct: 767 L--LHLE----------------------------------------VSNCSNLQTIPEL 784

Query: 766 PLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKH 825
           P  L+ LN + C  L +LPE+ L ++ L+  +C   +SL  + L      +S +E+L K+
Sbjct: 785 PPLLKTLNAQSCTSLLTLPEISLSIKTLSAIDC---KSLETVFL------SSAVEQLKKN 835

Query: 826 SPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRI-----RHMAIASLRLGYE 880
              ++              F NCL LN  +   I  ++ + +     +H++  S  L   
Sbjct: 836 RRQVR--------------FWNCLNLNKDSLVAIALNAQIDVMKFANQHLSPPSQDLVQN 881

Query: 881 MAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL---PPHSSCRNLIGFAFCAVL 937
               +        + V PGS +P+W   +++ + I I L   PP       +GF F  V+
Sbjct: 882 YDDYDANHRSYQVVYVYPGSNVPEWLEYKTTNAYIIIDLSSGPPFP----FLGFIFSFVI 937


>gi|22330441|ref|NP_176760.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6227009|gb|AAF06045.1|AC009513_1 Strong similarity to gb|AF098963 disease resistance protein
           RPP1-WsB from Arabidopsis thaliana and contains 2
           PF|00931 NB-ARC domains and 5 PF|00560 Leucine Rich
           Repeats [Arabidopsis thaliana]
 gi|332196311|gb|AEE34432.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1036

 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 229/670 (34%), Positives = 351/670 (52%), Gaps = 60/670 (8%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG--------NSETAGGLE 55
           SD V+++GIWG  GIGKTT+A+ +F QFS  FE S F+ +V+         + E +  L 
Sbjct: 225 SDEVRMIGIWGPSGIGKTTIARILFSQFSDSFELSVFMENVKELMYTRPVCSDEYSAKL- 283

Query: 56  HLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF 113
           HLQKQ +S  ++ K       IPH    ++R++  K+ IVLD++++  QL  +  E   F
Sbjct: 284 HLQKQFMSQIINHK----DIEIPHLGVVEDRLKDKKVFIVLDNIDQSIQLDAIAKESRWF 339

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSR 173
           G GSRI++TT+D+++L+   G    IY VN     EA + FC +AF +    +     + 
Sbjct: 340 GHGSRIIITTQDRKLLKAHDGI-NHIYNVNFPSAYEACQIFCMYAFGQKFPKDGFEELAW 398

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            V     G PL L V+GS      K  W   L  L    ++   +I  ILK S+N L   
Sbjct: 399 EVAKLLGGLPLGLRVMGSHFRGMSKHEWINALPRLRTRLDA---NIQSILKFSYNALCEE 455

Query: 234 VKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEM 290
            K +FL IAC F  +  + V   L +   +V   L +L +KSL+SI G  + MH++L+++
Sbjct: 456 DKDLFLYIACLFNNKRIEKVEEHLAEKSLNVKQGLHVLTEKSLISIEGGRIKMHNLLEQL 515

Query: 291 GRQIVRQ----ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDP 345
           G++IVR     +  +EPGKR  L D ++I  +L ++ G+ ++ GI    S++   +N+  
Sbjct: 516 GKEIVRHGLGHQPIREPGKRQFLVDTRDICELLTNDTGSKSVIGIHFYSSELSSELNISE 575

Query: 346 RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
           RAF  M NL+  +FY     E +KL               LP GL+YL +KL+ L WD +
Sbjct: 576 RAFEGMPNLKFLRFYYRYGDESDKL--------------YLPQGLNYLSQKLKILEWDHF 621

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
           PL  +PSNF  + LVELN+R SK+ + WEG +   P +  N+ YL+           S  
Sbjct: 622 PLTCMPSNFCTEYLVELNMRFSKLHKLWEGNR---PLANLNWMYLNHSKILKELPDLSTA 678

Query: 466 SNLHFVCPVTINFSYCVNLIEFPQISGKVT---RLYLGQ-SAIEEVPSSIECLTDLEVLD 521
           +NL  +  V      C +L+E P   GK T   +LYL   +++ E+PSSI  L  L+ L 
Sbjct: 679 TNLQELFLVK-----CSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLT 733

Query: 522 LRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
           L GC +L+ +  +   L SL  L L  CL L+ FPEI   ++ LK +   RT I E+PSS
Sbjct: 734 LNGCSKLEVLPANI-NLESLDELDLTDCLVLKRFPEISTNIKVLKLL---RTTIKEVPSS 789

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
            ++ P L  L   + S   NL   + +L+ +  +      + ++P  V   + L++L  +
Sbjct: 790 IKSWPRLRDL---ELSYNQNLKGFMHALDIITTMYFNDIEMQEIPLWVKKISRLQTLILN 846

Query: 642 HCKGLESFPR 651
            CK L S P+
Sbjct: 847 GCKKLVSLPQ 856



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 160/386 (41%), Gaps = 92/386 (23%)

Query: 562 MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG---SLEYLYYILAA 618
           + +L  +Y + + I +          L+ LF+  CS L  LP +IG   +L+ LY  L  
Sbjct: 655 LANLNWMYLNHSKILKELPDLSTATNLQELFLVKCSSLVELPSSIGKATNLQKLY--LNM 712

Query: 619 ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIA 678
            +++ +LPSS+   + L+ L  + C  LE  P    + L ++  L ++D  V +   EI+
Sbjct: 713 CTSLVELPSSIGNLHKLQKLTLNGCSKLEVLPAN--INLESLDELDLTDCLVLKRFPEIS 770

Query: 679 YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
             +++++L L     + +P+ IK   +LR + L     L+        +  ++  D +M 
Sbjct: 771 --TNIKVLKLLRTTIKEVPSSIKSWPRLRDLELSYNQNLKGFMHALDIITTMYFNDIEMQ 828

Query: 739 QSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNC 798
           +    +P  ++ +                 LQ L L  C  L SLP+LP  L  L V NC
Sbjct: 829 E----IPLWVKKISR---------------LQTLILNGCKKLVSLPQLPDSLSYLKVVNC 869

Query: 799 NRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNK 858
                       L+ LD S       H+P +               F NCLKLN +A   
Sbjct: 870 E----------SLERLDCSF------HNPKMSLG------------FINCLKLNKEAKEL 901

Query: 859 ILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQS-SGSSICI 917
           I+                            ++     VLPG E+P +F++++ +GSS+ +
Sbjct: 902 II----------------------------QITTKCTVLPGREVPVYFTHRTKNGSSLRV 933

Query: 918 QL---PPHSSCRNLIGFAFCAVLDSK 940
            L   P  ++ R    F  C +L +K
Sbjct: 934 NLNRRPLSTASR----FKACILLVNK 955


>gi|357439719|ref|XP_003590137.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355479185|gb|AES60388.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 859

 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 214/617 (34%), Positives = 326/617 (52%), Gaps = 92/617 (14%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + +S+ V ++GIWGMGG+GKTTLAKAI++Q   +FEG  F+ ++R   ET      LQ+ 
Sbjct: 198 IQNSNDVLLLGIWGMGGLGKTTLAKAIYNQIGIKFEGRSFLLNIREVWETDTNQVSLQEN 257

Query: 61  MLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           +L                   KER+ + ++L+VLDDVN++ QLK L G    FG GSR++
Sbjct: 258 LL-------------------KERLAQKRVLLVLDDVNKLDQLKALCGSRKWFGPGSRVI 298

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRD R+L   R +   +Y V  ++  E+ E FC  AFK+   PE    HSR V+ Y+ 
Sbjct: 299 ITTRDMRLLRSCRVD--LVYTVVEMDERESLELFCWHAFKQPCPPEGFATHSRDVIVYSG 356

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFL 239
           G PL L+VLGS L     + W KVL  L  I   ++      LK+SF+ L     K IF 
Sbjct: 357 GLPLALQVLGSYLSGCETTEWQKVLEKLKCIPHDQVQ---KKLKVSFDGLKDVTEKQIFF 413

Query: 240 DIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQIV 295
           DIACFF G DK+ +  IL+      D+ +++L+ +SLV++  GN L MHD+L++MGRQIV
Sbjct: 414 DIACFFIGMDKNDIIQILNGCGYFGDIGIEVLVQQSLVTVDIGNKLRMHDLLRDMGRQIV 473

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
            +ES   P  RSRLW  +E+  +L ++KGT+A++G+ L+    + + L+ ++F  M+ LR
Sbjct: 474 YEESPFHPEMRSRLWFREEVFDMLSNHKGTEAVKGLALEFP--REVCLETKSFKKMNKLR 531

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
           L +                       + V+L     YL   L++L+W  +P   +P+ F+
Sbjct: 532 LLRL----------------------AGVKLKGDFKYLSGDLKWLYWHGFPETYVPAEFQ 569

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
             +LV + L+ SK++Q W   +      ++N K L                         
Sbjct: 570 LGSLVVMELKYSKLKQIWNKSQM-----LENLKVL------------------------- 599

Query: 476 INFSYCVNLIEFPQIS--GKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
            N S+ ++L E P  S    + +L L    ++  V  SI  L  + +++L  C  L+ + 
Sbjct: 600 -NLSHSLDLTETPDFSYMPNLEKLILEDCPSLSTVSHSIGSLHKILLINLTDCTGLRTLP 658

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
            S  KL+SL TLIL GC  L+   E LE+ME L  + +D+T I E+PSS   LP +  +F
Sbjct: 659 KSIYKLKSLATLILSGCSMLDKL-EDLEQMESLTTLIADKTAIPEVPSS---LPKMYDVF 714

Query: 593 VEDCSKLDNLPDNIGSL 609
           +    + DN P  I  L
Sbjct: 715 LSFRGE-DNRPRFISHL 730


>gi|356558721|ref|XP_003547651.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1054

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 210/593 (35%), Positives = 314/593 (52%), Gaps = 66/593 (11%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPN-I 77
           KTT+A+ ++++   E+EG CF++++R  S   G +  L+K + ST L E+ L++  PN +
Sbjct: 251 KTTIAQEVYNKLCFEYEGCCFLANIREESGRHGIIS-LKKNLFSTLLGEEYLKIDTPNGL 309

Query: 78  PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
           P + + R+ RMK+LI+LDDVN+  QL+ L    D FG GSRI+VTTRD++VL     E  
Sbjct: 310 PQYVERRLHRMKVLIILDDVNDSEQLETL-ARTDWFGPGSRIIVTTRDRQVLA---NEFA 365

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
            IY V  L F+E+   F    FK+ H   +    S+ VV Y KG P VL++LG  L  K 
Sbjct: 366 NIYEVEPLNFDESLWLFNLNVFKQKHPEIEYYELSKKVVDYAKGIPFVLKLLGHRLHGKE 425

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDF--VAS 255
           K  W   L   N     +   ++DI+K+S+N L    K I +DIACFF G   +   +  
Sbjct: 426 KEIWESQLEGQN----VQTKKVHDIIKLSYNDLDQDEKKILMDIACFFYGLRLEVKRIKL 481

Query: 256 ILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
           +L D +  V   L+ L DK+L+SIS  N ++MHDI++E   QI  QES ++P  + RL+D
Sbjct: 482 LLKDHDYSVASGLERLKDKALISISKENMVSMHDIIKETAWQIAPQESIEDPRSQIRLFD 541

Query: 312 PKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
           P ++ +VLK+NKG +AI  I ++L ++K + L+P+ FT M+ L    FY         + 
Sbjct: 542 PDDVYQVLKYNKGNEAIRSIVVNLLRMKQLRLNPQVFTKMNKLHFLNFY--------SVW 593

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
           S ST  Q  +  + L  GL+ LP +LRYL W  YPL +LPS F  +NLVEL+L  S+V++
Sbjct: 594 SSSTFLQDPWG-LYLSQGLESLPNELRYLRWTHYPLESLPSKFSAENLVELHLPYSRVKK 652

Query: 432 PWE----------------------------------GEKACVP-----SSIQNFKYLSA 452
            W                                   G + CV       S+ + K L  
Sbjct: 653 LWLKVPDLVNLKVLKLHSSAHVKELPDLSTATNLEIIGLRFCVGLTRVHPSVFSLKKLEK 712

Query: 453 LSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIE 512
           L   GC SL S  SN+H      ++   C+ L +F  IS  + +L L  ++I+++P SI 
Sbjct: 713 LDLGGCTSLTSLRSNIHMQSLRYLSLHGCLELKDFSVISKNLVKLNLELTSIKQLPLSIG 772

Query: 513 CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHL 565
             + L++L L     ++ + TS   L  L  L L  C  L   PE+   +E L
Sbjct: 773 SQSMLKMLRL-AYTYIETLPTSIKHLTRLRHLDLRYCAGLRTLPELPPSLETL 824



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 164/376 (43%), Gaps = 81/376 (21%)

Query: 613 YYILAAASAISQLPSSVALS-------NMLRSLDSSHCKGLESFPRTFLLGLSAMGL--L 663
           +Y + ++S   Q P  + LS       N LR L  +H   LES P  F    SA  L  L
Sbjct: 589 FYSVWSSSTFLQDPWGLYLSQGLESLPNELRYLRWTHYP-LESLPSKF----SAENLVEL 643

Query: 664 HISDYAVREIPQEIAYLSSLEILYL-SGNNFESLP----AIIKQMSQLRF------IHLE 712
           H+    V+++  ++  L +L++L L S  + + LP    A   ++  LRF      +H  
Sbjct: 644 HLPYSRVKKLWLKVPDLVNLKVLKLHSSAHVKELPDLSTATNLEIIGLRFCVGLTRVHPS 703

Query: 713 DFNMLQSLPELPL----------------CLKYLHLIDCKMLQSLPVLPFCLESLDLTGC 756
            F+ L+ L +L L                 L+YL L  C  L+   V+   L  L+L   
Sbjct: 704 VFS-LKKLEKLDLGGCTSLTSLRSNIHMQSLRYLSLHGCLELKDFSVISKNLVKLNLE-- 760

Query: 757 NMLRSLPELPLCLQYLNLEDCNMLR----SLPELPLCLQLLT------VRNCNRLQSLPE 806
             L S+ +LPL +   ++    MLR     +  LP  ++ LT      +R C  L++LPE
Sbjct: 761 --LTSIKQLPLSIGSQSM--LKMLRLAYTYIETLPTSIKHLTRLRHLDLRYCAGLRTLPE 816

Query: 807 ILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADS--- 863
           +   L+ LD  V E +S  +      P+  K       F NCL+L+  +   I  ++   
Sbjct: 817 LPPSLETLD--VRECVSLETVMFPSIPQQRKENKKKVCFWNCLQLDEYSLMAIEMNAQIN 874

Query: 864 LLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGS--SICIQLPP 921
           +++  H  +++ R            + +G+  V PGS++P W  +++        + + P
Sbjct: 875 MVKFAHQHLSTFR------------DAQGTY-VYPGSDVPQWLDHKTRHGYDDDYVTIAP 921

Query: 922 HSSCRNLIGFAFCAVL 937
           HSS    +GF F  ++
Sbjct: 922 HSSH---LGFIFGFIV 934



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 29/226 (12%)

Query: 547 LGCLNLEHFPEILEKM------EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
           L  L   H+P  LE +      E+L  ++   + + +L     +L  L+VL +   + + 
Sbjct: 618 LRYLRWTHYP--LESLPSKFSAENLVELHLPYSRVKKLWLKVPDLVNLKVLKLHSSAHVK 675

Query: 601 NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF----LLG 656
            LPD   +       L     ++++  SV     L  LD   C  L S         L  
Sbjct: 676 ELPDLSTATNLEIIGLRFCVGLTRVHPSVFSLKKLEKLDLGGCTSLTSLRSNIHMQSLRY 735

Query: 657 LSAMGLLHISDYAV---------------REIPQEIAYLSSLEILYLSGNNFESLPAIIK 701
           LS  G L + D++V               +++P  I   S L++L L+    E+LP  IK
Sbjct: 736 LSLHGCLELKDFSVISKNLVKLNLELTSIKQLPLSIGSQSMLKMLRLAYTYIETLPTSIK 795

Query: 702 QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL--PVLP 745
            +++LR + L     L++LPELP  L+ L + +C  L+++  P +P
Sbjct: 796 HLTRLRHLDLRYCAGLRTLPELPPSLETLDVRECVSLETVMFPSIP 841


>gi|227438273|gb|ACP30626.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1276

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 222/640 (34%), Positives = 327/640 (51%), Gaps = 87/640 (13%)

Query: 8   QIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS-TTL 66
            IVG+WGM GIGKT + + IF + +  ++   F+ D     +T G L HL+ +  S  + 
Sbjct: 332 HIVGLWGMAGIGKTAITREIFRRQAERYDVCYFLPDFHIVCQTRG-LSHLRDEFFSRISG 390

Query: 67  SEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
            EK+ +   +    F ++R    K+L+VLD V+     + L+G    F  G  +++T+R+
Sbjct: 391 EEKVTIDACDTKLGFIRDRFLSKKVLVVLDGVSSARDAEFLVGGFGWFSGGHTLILTSRN 450

Query: 126 KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS-----VVSYTK 180
           ++VL +   +E  IY +  L   E+ +    FA ++N       W   +     +V+Y  
Sbjct: 451 RQVLVQCNAKE--IYEIQKLSERESLQLCSQFATEQN-------WKGSTSLVSELVNYAS 501

Query: 181 GNPLVLEVLGSSL---CLK-RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           G PL L  LGSSL   C+K  K H       L R+ ++ + +I D  K SFN L    K+
Sbjct: 502 GIPLALCALGSSLQNQCIKDEKQH-------LKRLRQNPLVEIQDAFKRSFNVLDGNEKN 554

Query: 237 IFLDIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
            FLD+ACFF GE+KD+V +ILD     +E  +   LID+SL+SI  N + M +I Q+ GR
Sbjct: 555 TFLDLACFFRGENKDYVVNILDGCGFLTELGIYG-LIDESLISIVDNKIEMLNIFQDTGR 613

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
            +V QES  E GKRSRLWDP +I  VL +N GT+AIEGIFLD + +  + L P  F  + 
Sbjct: 614 FVVCQESS-ETGKRSRLWDPSDIVDVLTNNSGTEAIEGIFLDSTGLT-VELSPTVFEKIY 671

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            LR  K Y P                 ++  V LP GL  LP +LR LHW+  PL +LP 
Sbjct: 672 RLRFLKLYSPT--------------SKNHCNVSLPQGLYSLPDELRLLHWERCPLESLPR 717

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
            F PKN+VELN+  S + + W+G K     +++N K                        
Sbjct: 718 KFNPKNIVELNMPYSNMTKLWKGTK-----NLENLKR----------------------- 749

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYL---GQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
              I  S+   LI+FP++S      ++   G +++ +V SSI     L  L L+ C  L+
Sbjct: 750 ---IILSHSRRLIKFPRLSKARNLEHIDLEGCTSLVKVNSSILHHHKLIFLSLKDCSHLQ 806

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
            + T+   L +L  L L GCL LE FP+      +LK +Y   T I E+PSS   L  L 
Sbjct: 807 TMPTT-VHLEALEVLNLSGCLELEDFPDF---SPNLKELYLAGTAIREMPSSIGGLSKLV 862

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSV 629
            L +E+C +L +LP  I +L+ +  + A   A S   SSV
Sbjct: 863 TLDLENCDRLQHLPPEIRNLKVVVTLSAKRPAASMNLSSV 902


>gi|444438415|gb|AGE10387.1| resistance to ralstonia solanacearum 1, partial [Arabidopsis
           thaliana]
          Length = 1373

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 251/810 (30%), Positives = 384/810 (47%), Gaps = 166/810 (20%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ VGIWGM G+GKTTLAKA+FDQ S  F+ SCF+ D   +    G    L++Q+L    
Sbjct: 172 IRCVGIWGMPGVGKTTLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCLLEEQLLPGND 231

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
           +  +++         ++R+   ++L+VLDDV      +  +   D  G GS I++T+RDK
Sbjct: 232 ATIMKLNS------LRDRLNSKRVLVVLDDVCNALVAESFLEGFDWLGPGSLIIITSRDK 285

Query: 127 RVLEKFR-GEEKKIYRVNGLEFEEAFEHF-CNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           +V   FR     +IY V GL  +EA + F  + + KE+   ++L+  S  V+SY  GNPL
Sbjct: 286 QV---FRLCGINQIYEVQGLNEKEARQLFLLSASIKEDMGEQNLHELSVRVISYANGNPL 342

Query: 185 VLEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
            + V G  L  K+K S        L R        I D  K S++ L+   K+IFLDIAC
Sbjct: 343 AISVYGRELKGKKKLSEMETAFLKLKR---RPPFKIVDAFKSSYDTLSDNEKNIFLDIAC 399

Query: 244 FFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
           FF+GE+ ++V  +L+         +D+L+DK LV+IS N + +H + Q++GR+I+  E+ 
Sbjct: 400 FFQGENVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREIINGET- 458

Query: 301 KEPGKRSRLWDPKEISRVLKHN---------------KGTDAIEGIFLDLSKIKGINLDP 345
            +  +R RLW+P  I  +L++N               +G++ IEG+FLD S ++  +L P
Sbjct: 459 VQIERRRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDTSNLR-FDLQP 517

Query: 346 RAFTNMSNLRLFKFYV--PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWD 403
            AF NM NLRL K Y   P+ + +   P+ S               L  LP +LR LHW+
Sbjct: 518 SAFKNMLNLRLLKIYCSNPEVHPVINFPTGS---------------LHSLPNELRLLHWE 562

Query: 404 TYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA---------CVPSSIQNF------K 448
            YPL++LP NF P++LVE+N+  S++++ W G K          C    + +       +
Sbjct: 563 NYPLKSLPQNFDPRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLVDIDDLLKAE 622

Query: 449 YLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVP 508
            L  +  +GC  L++FP+    +    +N S C+ +    +I   + +L+L  + I  +P
Sbjct: 623 NLEVIDLQGCTRLQNFPAAGRLLRLRVVNLSGCIKIKSVLEIPPNIEKLHLQGTGILALP 682

Query: 509 SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILE--KMEHLK 566
                                 +ST     R LV         L   P + E  K+E L 
Sbjct: 683 ----------------------VSTVKPNHRELVNF-------LTEIPGLSEASKLERL- 712

Query: 567 RIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLP 626
                 T + E  SS ++L  L  L ++DCS L +LP N+ +L+                
Sbjct: 713 ------TSLLESNSSCQDLGKLICLELKDCSCLQSLP-NMANLD---------------- 749

Query: 627 SSVALSNMLRSLDSSHCKGLES---FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSL 683
                   L  LD S C  L S   FPR        +  L++   A+RE+PQ      SL
Sbjct: 750 --------LNVLDLSGCSSLNSIQGFPR-------FLKQLYLGGTAIREVPQ---LPQSL 791

Query: 684 EILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPV 743
           EIL   G+   SLP     M+ L F                  LK L L  C  L+++  
Sbjct: 792 EILNAHGSCLRSLP----NMANLEF------------------LKVLDLSGCSELETIQG 829

Query: 744 LPFCLESLDLTGCNMLRSLPELPLCLQYLN 773
            P  L+ L   G   LR +P+LPL L+ LN
Sbjct: 830 FPRNLKELYFAG-TTLREVPQLPLSLEVLN 858



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)

Query: 220  YDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI 276
            Y++L++S++ L    K +FL IA  F  ED DFVA ++   + DV   L +L D SL+S+
Sbjct: 1086 YEVLRVSYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLADVSLISV 1145

Query: 277  SGNF-LNMHDILQEMGRQIVRQES 299
            S N  + MH + ++MG++I+  +S
Sbjct: 1146 SSNGEIVMHSLQRQMGKEILHGQS 1169



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 128/300 (42%), Gaps = 47/300 (15%)

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAIS 623
           L+ ++ +  P+  LP +F+  P   V      S+L  L     +LE L  I L  +  + 
Sbjct: 556 LRLLHWENYPLKSLPQNFD--PRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLV 613

Query: 624 QLPSSVALSNMLRSLDSSHCKGLESFPRTF-LLGLSAMGLLH-ISDYAVREIPQEIAYLS 681
            +   +   N L  +D   C  L++FP    LL L  + L   I   +V EIP  I    
Sbjct: 614 DIDDLLKAEN-LEVIDLQGCTRLQNFPAAGRLLRLRVVNLSGCIKIKSVLEIPPNI---- 668

Query: 682 SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY------------ 729
             E L+L G    +LP     +S ++  H E  N L  +P L    K             
Sbjct: 669 --EKLHLQGTGILALP-----VSTVKPNHRELVNFLTEIPGLSEASKLERLTSLLESNSS 721

Query: 730 ---------LHLIDCKMLQSLPVLP-FCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM 779
                    L L DC  LQSLP +    L  LDL+GC+ L S+   P  L+ L L     
Sbjct: 722 CQDLGKLICLELKDCSCLQSLPNMANLDLNVLDLSGCSSLNSIQGFPRFLKQLYL-GGTA 780

Query: 780 LRSLPELPLCLQLLTVRNCNRLQSLPEI--LLCLQELDASVLEKLSKHSPDLQWAPESLK 837
           +R +P+LP  L++L     + L+SLP +  L  L+ LD S   +L      +Q  P +LK
Sbjct: 781 IREVPQLPQSLEILNAHG-SCLRSLPNMANLEFLKVLDLSGCSELET----IQGFPRNLK 835


>gi|297800054|ref|XP_002867911.1| hypothetical protein ARALYDRAFT_914672 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313747|gb|EFH44170.1| hypothetical protein ARALYDRAFT_914672 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 966

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 215/642 (33%), Positives = 330/642 (51%), Gaps = 42/642 (6%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE 68
           IVG+ GM GIGKT LAK+ ++++  +F  S  ++DV          EH    +    L E
Sbjct: 63  IVGVVGMPGIGKTALAKSFYNRWEKQFAYSMCLADVSKMLN-----EHGPNWLQMRLLRE 117

Query: 69  KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRV 128
            L+   P +    K+ + + K  +VLDDVN   Q++ L+G LD   +GS+IV+TT DK +
Sbjct: 118 LLKDTHP-LHQIWKDELLKRKFFVVLDDVNGKEQIEYLLGNLDWIKEGSKIVITTSDKSL 176

Query: 129 LEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH--SRSVVSYTKGNPLVL 186
           ++         + V  L  E+  + F   AF  N+ P + N+   SR ++ Y KGNPL L
Sbjct: 177 VQNLVN---YTFVVPILNDEDGLKCFTYHAFGPNNPPPEENYLRLSRKILDYAKGNPLFL 233

Query: 187 EVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFE 246
           + LG  L  K +  W K +  L    +S    I D L   + +L+ + K  FLDIACFF 
Sbjct: 234 KELGVELLGKEEEDWEKRVGTLT---QSSSPKIQDALSKRYLELSEKQKDAFLDIACFFR 290

Query: 247 GEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKR 306
            +   +V  +LD  +S V+  L D+ L+SISG  + MHD+L   G+++  +        +
Sbjct: 291 SKTTSYVRCMLDSCDSGVIGDLTDRFLISISGGRVEMHDVLYTFGKELASR-------VQ 343

Query: 307 SRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYE 366
            RLW+ K+I R+LK+    + + G++LD+S++K    +  +FT+M +LR  K Y      
Sbjct: 344 CRLWNHKKIVRMLKYKSEMENVRGVYLDMSEVK----EKMSFTSMRSLRYLKIY------ 393

Query: 367 IEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRC 426
                S+   E  +   + +  GL +   ++R L W  + L  LP +F  KNLV L+L  
Sbjct: 394 ----SSICPMECKADQIIVVAEGLQFTLAEVRCLDWLRFSLDKLPLDFNAKNLVNLSLPY 449

Query: 427 SKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIE 486
           S ++Q WEG K  +P  + N K L  L+ +GC SLR+ P        V I  S C    E
Sbjct: 450 SSIKQVWEGVKV-LPEKMGNMKSLVFLNMRGCTSLRNIPKANLSSLKVLI-LSDCSRFQE 507

Query: 487 FPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLIL 546
           F  IS  +  LYL  +A+E +P +I  L  L +L+LR CK L+ + +S  KL++L  LIL
Sbjct: 508 FQVISENLETLYLDGTALETLPPAIGNLQRLVLLNLRSCKALEHLPSSLRKLKALEDLIL 567

Query: 547 LGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNI 606
            GC  L+ FP     M+HL+ +  D T + E+         L+ L +   S + NLP NI
Sbjct: 568 SGCSKLKSFPTDTGNMKHLRILLYDGTALKEIQMILHFKESLQRLCLSGNSMI-NLPANI 626

Query: 607 GSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
             L +L ++ L     + +LP+   L   L  LD+  C  LE
Sbjct: 627 KQLNHLKWLDLKYCENLIELPT---LPPNLEYLDAHGCHKLE 665



 Score =  103 bits (258), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 209/542 (38%), Gaps = 138/542 (25%)

Query: 503  AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM 562
             ++ +P  +  +  L  L++RGC  L+ I  +   L SL  LIL  C   + F  I E +
Sbjct: 458  GVKVLPEKMGNMKSLVFLNMRGCTSLRNIPKA--NLSSLKVLILSDCSRFQEFQVISENL 515

Query: 563  EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAI 622
            E L   Y D T +  LP +  NL  L +L +  C  L++LP ++  L+            
Sbjct: 516  ETL---YLDGTALETLPPAIGNLQRLVLLNLRSCKALEHLPSSLRKLK------------ 560

Query: 623  SQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSS 682
                        L  L  S C  L+SFP T    +  + +L     A++EI   + +  S
Sbjct: 561  -----------ALEDLILSGCSKLKSFP-TDTGNMKHLRILLYDGTALKEIQMILHFKES 608

Query: 683  LEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
            L+ L LSGN+  +LPA IKQ++ L+++                 LKY     C+ L  LP
Sbjct: 609  LQRLCLSGNSMINLPANIKQLNHLKWLD----------------LKY-----CENLIELP 647

Query: 743  VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQ 802
             LP  LE LD  GC+ L  + +                      PL + L+T + C+   
Sbjct: 648  TLPPNLEYLDAHGCHKLEHVMD----------------------PLAIALITEQTCST-- 683

Query: 803  SLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILAD 862
                                                    F FTNC  L   A N I + 
Sbjct: 684  ----------------------------------------FIFTNCTNLEEDARNTITSY 703

Query: 863  SLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPH 922
            +  + +  A     +G+    + K           PG E+P WF +Q+ GS +  +L P+
Sbjct: 704  AERKCQLHACKCYDMGFVSRASFK--------TCFPGCEVPLWFQHQAVGSVLEKRLQPN 755

Query: 923  SSCRNLI-GFAFCAVL---DSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYI 978
              C NL+ G A CAV+   D+K++  DCF     S   D     +S    V     S   
Sbjct: 756  -WCDNLVSGIALCAVVSFQDNKQL-IDCFSVKCASEFKDDNGSCISSNFKV----GSWTE 809

Query: 979  EDLIDSDRVILGFKPCLNVG------FPDGYHHTIATFKFFAERKFYKIKRCGLCPVYAN 1032
                +SD V +G+     +       +        AT KF      +++ +CG   VY  
Sbjct: 810  PGKTNSDHVFIGYASFSKITKRVESKYSGKCIPAEATLKFNVTDGTHEVVKCGFRLVYVE 869

Query: 1033 PS 1034
            P+
Sbjct: 870  PN 871


>gi|334183667|ref|NP_001185325.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196312|gb|AEE34433.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1051

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 229/670 (34%), Positives = 351/670 (52%), Gaps = 60/670 (8%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG--------NSETAGGLE 55
           SD V+++GIWG  GIGKTT+A+ +F QFS  FE S F+ +V+         + E +  L 
Sbjct: 240 SDEVRMIGIWGPSGIGKTTIARILFSQFSDSFELSVFMENVKELMYTRPVCSDEYSAKL- 298

Query: 56  HLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF 113
           HLQKQ +S  ++ K       IPH    ++R++  K+ IVLD++++  QL  +  E   F
Sbjct: 299 HLQKQFMSQIINHK----DIEIPHLGVVEDRLKDKKVFIVLDNIDQSIQLDAIAKESRWF 354

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSR 173
           G GSRI++TT+D+++L+   G    IY VN     EA + FC +AF +    +     + 
Sbjct: 355 GHGSRIIITTQDRKLLKAHDGI-NHIYNVNFPSAYEACQIFCMYAFGQKFPKDGFEELAW 413

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            V     G PL L V+GS      K  W   L  L    ++   +I  ILK S+N L   
Sbjct: 414 EVAKLLGGLPLGLRVMGSHFRGMSKHEWINALPRLRTRLDA---NIQSILKFSYNALCEE 470

Query: 234 VKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEM 290
            K +FL IAC F  +  + V   L +   +V   L +L +KSL+SI G  + MH++L+++
Sbjct: 471 DKDLFLYIACLFNNKRIEKVEEHLAEKSLNVKQGLHVLTEKSLISIEGGRIKMHNLLEQL 530

Query: 291 GRQIVRQ----ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDP 345
           G++IVR     +  +EPGKR  L D ++I  +L ++ G+ ++ GI    S++   +N+  
Sbjct: 531 GKEIVRHGLGHQPIREPGKRQFLVDTRDICELLTNDTGSKSVIGIHFYSSELSSELNISE 590

Query: 346 RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
           RAF  M NL+  +FY     E +KL               LP GL+YL +KL+ L WD +
Sbjct: 591 RAFEGMPNLKFLRFYYRYGDESDKL--------------YLPQGLNYLSQKLKILEWDHF 636

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
           PL  +PSNF  + LVELN+R SK+ + WEG +   P +  N+ YL+           S  
Sbjct: 637 PLTCMPSNFCTEYLVELNMRFSKLHKLWEGNR---PLANLNWMYLNHSKILKELPDLSTA 693

Query: 466 SNLHFVCPVTINFSYCVNLIEFPQISGKVT---RLYLGQ-SAIEEVPSSIECLTDLEVLD 521
           +NL  +  V      C +L+E P   GK T   +LYL   +++ E+PSSI  L  L+ L 
Sbjct: 694 TNLQELFLVK-----CSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLT 748

Query: 522 LRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
           L GC +L+ +  +   L SL  L L  CL L+ FPEI   ++ LK +   RT I E+PSS
Sbjct: 749 LNGCSKLEVLPANI-NLESLDELDLTDCLVLKRFPEISTNIKVLKLL---RTTIKEVPSS 804

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
            ++ P L  L   + S   NL   + +L+ +  +      + ++P  V   + L++L  +
Sbjct: 805 IKSWPRLRDL---ELSYNQNLKGFMHALDIITTMYFNDIEMQEIPLWVKKISRLQTLILN 861

Query: 642 HCKGLESFPR 651
            CK L S P+
Sbjct: 862 GCKKLVSLPQ 871



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 160/386 (41%), Gaps = 92/386 (23%)

Query: 562 MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG---SLEYLYYILAA 618
           + +L  +Y + + I +          L+ LF+  CS L  LP +IG   +L+ LY  L  
Sbjct: 670 LANLNWMYLNHSKILKELPDLSTATNLQELFLVKCSSLVELPSSIGKATNLQKLY--LNM 727

Query: 619 ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIA 678
            +++ +LPSS+   + L+ L  + C  LE  P    + L ++  L ++D  V +   EI+
Sbjct: 728 CTSLVELPSSIGNLHKLQKLTLNGCSKLEVLPAN--INLESLDELDLTDCLVLKRFPEIS 785

Query: 679 YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
             +++++L L     + +P+ IK   +LR + L     L+        +  ++  D +M 
Sbjct: 786 --TNIKVLKLLRTTIKEVPSSIKSWPRLRDLELSYNQNLKGFMHALDIITTMYFNDIEMQ 843

Query: 739 QSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNC 798
           +    +P  ++ +                 LQ L L  C  L SLP+LP  L  L V NC
Sbjct: 844 E----IPLWVKKISR---------------LQTLILNGCKKLVSLPQLPDSLSYLKVVNC 884

Query: 799 NRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNK 858
                       L+ LD S       H+P +               F NCLKLN +A   
Sbjct: 885 E----------SLERLDCSF------HNPKMSLG------------FINCLKLNKEAKEL 916

Query: 859 ILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQS-SGSSICI 917
           I+                            ++     VLPG E+P +F++++ +GSS+ +
Sbjct: 917 II----------------------------QITTKCTVLPGREVPVYFTHRTKNGSSLRV 948

Query: 918 QL---PPHSSCRNLIGFAFCAVLDSK 940
            L   P  ++ R    F  C +L +K
Sbjct: 949 NLNRRPLSTASR----FKACILLVNK 970


>gi|51555866|dbj|BAD38678.1| disease resistance protein SLH1 [Arabidopsis thaliana]
 gi|306448589|gb|ADM88042.1| RRS1-R [Arabidopsis thaliana]
          Length = 1378

 Score =  293 bits (750), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 256/796 (32%), Positives = 385/796 (48%), Gaps = 138/796 (17%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ VGIWGM GIGKTTLAKA+FDQ S  F+ SCF+ D   +    G    L++Q+L    
Sbjct: 172 IRCVGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCLLEEQLLPGND 231

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
           +  ++++        ++R+   ++L+VLDDV      +  +   D  G GS I++T+RDK
Sbjct: 232 ATIMKLSS------LRDRLNSKRVLVVLDDVCNALVAESFLEGFDWLGPGSLIIITSRDK 285

Query: 127 RVLEKFRGEEKKIYRVNGLEFEEAFEHF-CNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
           +V  +  G   +IY V GL  +EA + F  + +  E+   ++L+  S  V+SY  GNPL 
Sbjct: 286 QVF-RLCG-INQIYEVQGLNEKEARQLFLLSASIMEDMGEQNLHELSVRVISYANGNPLA 343

Query: 186 LEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
           + V G  L  K+K S        L R        I D  K S++ L+   K+IFLDIACF
Sbjct: 344 ISVYGRELKGKKKLSEMETAFLKLKR---RPPFKIVDAFKSSYDTLSDNEKNIFLDIACF 400

Query: 245 FEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F+GE+ ++V  +L+         +D+L+DK LV+IS N + +H + Q++GR+I+  E+  
Sbjct: 401 FQGENVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREIINGET-V 459

Query: 302 EPGKRSRLWDPKEISRVLKHN---------------KGTDAIEGIFLDLSKIKGINLDPR 346
           +  +R RLW+P  I  +L++N               +G++ IEG+FLD S ++  +L P 
Sbjct: 460 QIERRRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDTSNLR-FDLQPS 518

Query: 347 AFTNMSNLRLFKFYV--PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT 404
           AF NM NLRL K Y   P+ + +   P+ S               L  LP +LR LHW+ 
Sbjct: 519 AFKNMLNLRLLKIYCSNPEVHPVINFPTGS---------------LHSLPNELRLLHWEN 563

Query: 405 YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSF 464
           YPL++LP NF P++LVE+N+  S++++ W G K        N + L  +     Q L   
Sbjct: 564 YPLKSLPQNFDPRHLVEINMPYSQLQKLWGGTK--------NLEMLRTIRLCHSQHLVDI 615

Query: 465 PSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL-YLGQSAIEEVPSSIECLTDLEVLDLR 523
              L       I+   C  L  FP  +G++ RL  +  S   ++ S +E   ++E L L+
Sbjct: 616 DDLLKAENLEVIDLQGCTRLQNFPA-AGRLLRLRVVNLSGCIKIKSVLEIPPNIEKLHLQ 674

Query: 524 GCKRLK-RISTSFCKLRSLVTLILLGCLNLEHFPEILE--KMEHLKRIYSDRTPITELPS 580
           G   L   +ST     R LV         L   P + E  K+E L       T + E  S
Sbjct: 675 GTGILALPVSTVKPNHRELVNF-------LTEIPGLSEASKLERL-------TSLLESNS 720

Query: 581 SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS 640
           S ++L  L  L ++DCS L +LP N+ +L+                        L  LD 
Sbjct: 721 SCQDLGKLICLELKDCSCLQSLP-NMANLD------------------------LNVLDL 755

Query: 641 SHCKGLES---FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLP 697
           S C  L S   FPR        +  L++   A+RE+PQ      SLEIL   G+   SLP
Sbjct: 756 SGCSSLNSIQGFPR-------FLKQLYLGGTAIREVPQ---LPQSLEILNAHGSCLRSLP 805

Query: 698 AIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCN 757
                M+ L F                  LK L L  C  L+++   P  L+ L   G  
Sbjct: 806 ----NMANLEF------------------LKVLDLSGCSELETIQGFPRNLKELYFAG-T 842

Query: 758 MLRSLPELPLCLQYLN 773
            LR +P+LPL L+ LN
Sbjct: 843 TLREVPQLPLSLEVLN 858



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)

Query: 220  YDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI 276
            Y++L++S++ L    K +FL IA  F  ED DFVA ++   + DV   L +L D SL+S+
Sbjct: 1086 YEVLRVSYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLADVSLISV 1145

Query: 277  SGNF-LNMHDILQEMGRQIVRQES 299
            S N  + MH + ++MG++I+  +S
Sbjct: 1146 SSNGEIVMHSLQRQMGKEILHGQS 1169



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 128/300 (42%), Gaps = 47/300 (15%)

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAIS 623
           L+ ++ +  P+  LP +F+  P   V      S+L  L     +LE L  I L  +  + 
Sbjct: 556 LRLLHWENYPLKSLPQNFD--PRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSQHLV 613

Query: 624 QLPSSVALSNMLRSLDSSHCKGLESFPRTF-LLGLSAMGLLH-ISDYAVREIPQEIAYLS 681
            +   +   N L  +D   C  L++FP    LL L  + L   I   +V EIP  I    
Sbjct: 614 DIDDLLKAEN-LEVIDLQGCTRLQNFPAAGRLLRLRVVNLSGCIKIKSVLEIPPNI---- 668

Query: 682 SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY------------ 729
             E L+L G    +LP     +S ++  H E  N L  +P L    K             
Sbjct: 669 --EKLHLQGTGILALP-----VSTVKPNHRELVNFLTEIPGLSEASKLERLTSLLESNSS 721

Query: 730 ---------LHLIDCKMLQSLPVLP-FCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM 779
                    L L DC  LQSLP +    L  LDL+GC+ L S+   P  L+ L L     
Sbjct: 722 CQDLGKLICLELKDCSCLQSLPNMANLDLNVLDLSGCSSLNSIQGFPRFLKQLYL-GGTA 780

Query: 780 LRSLPELPLCLQLLTVRNCNRLQSLPEI--LLCLQELDASVLEKLSKHSPDLQWAPESLK 837
           +R +P+LP  L++L     + L+SLP +  L  L+ LD S   +L      +Q  P +LK
Sbjct: 781 IREVPQLPQSLEILNAHG-SCLRSLPNMANLEFLKVLDLSGCSELET----IQGFPRNLK 835


>gi|110741935|dbj|BAE98908.1| disease resistance like protein [Arabidopsis thaliana]
          Length = 968

 Score =  293 bits (750), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 235/785 (29%), Positives = 368/785 (46%), Gaps = 125/785 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFV----------SDVRGNSETAGG 53
           S  V++VGIWG  GIGKTT+A+A+F + S  F  S ++          S  R N +    
Sbjct: 9   SKEVRMVGIWGPSGIGKTTIARALFARLSRHFHCSVYIDRAFVSKSMASYSRANPDDYNM 68

Query: 54  LEHLQKQMLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
             HLQ+  LST L ++       I H     ER++  K+L+ +DD+++   L  L G++ 
Sbjct: 69  KLHLQETFLSTILGKQ----NIKIDHLGALGERLKHQKVLLFIDDLDQQVVLNALAGQIQ 124

Query: 112 QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH 171
            FG GSRI+V T DK +L     E   IY+V     E A E  C +AF++N  P+     
Sbjct: 125 WFGGGSRIIVVTNDKHLLISHGIEN--IYQVCLPSKELALEMLCRYAFRQNTPPDGFKKL 182

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL- 230
           +  VV +    PL L VLGS L  + K +W  +L  L +  + +I      L++ ++ L 
Sbjct: 183 AVEVVRHAGILPLGLNVLGSYLRGRNKRYWMDMLPRLRKGLDGKIQKA---LRVGYDGLD 239

Query: 231 TPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDIL 287
             + ++IF  IAC F  E  + +  +L DS+ +    L+ L+DKSLV++  N + +H +L
Sbjct: 240 NKKDEAIFRHIACLFNFEKVNDIRLLLADSDLNFNIGLENLVDKSLVNVRSNIVEVHCLL 299

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPR 346
           QEMGR+IVR +S  E G+R  L D ++I  VL  N GT  + GI LD+ +I   +N+  +
Sbjct: 300 QEMGREIVRAQSN-EAGEREFLMDTEDICDVLDDNIGTKKMLGISLDVDEIDHELNVHEK 358

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           AF  M NLR    Y       +K+            ++ LP   DYLP KL+ L WD YP
Sbjct: 359 AFQGMRNLRFLNIYTKALMSGQKI------------RLHLPENFDYLPPKLKLLCWDKYP 406

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEGE------------------------------ 436
           +R LPS+F+P+NLV+L ++ S++E+ WEG                               
Sbjct: 407 MRCLPSSFRPENLVKLKMQESELEKLWEGVGSLTCLKDMDLEKSKNLKEIPDLSMATNLK 466

Query: 437 ----KAC-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEF 487
               K C     + SSIQN   L+ L+ +GC +L + P+ ++      ++   C  L  F
Sbjct: 467 TLNLKYCSSLVKISSSIQNLNKLTKLNMEGCTNLETLPAGINLKSLHRLDLRGCSRLRMF 526

Query: 488 PQISGKVTRLYLGQSAIEEVPSSIEC--LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
           P IS  ++ L+L +++IEE PS++    L DL +  +   K  + +    C ++ L    
Sbjct: 527 PDISNNISVLFLDKTSIEEFPSNLHLKKLFDLSMQQMNSEKLWEGVQPLTCLMKMLS--- 583

Query: 546 LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
                     P + +    L    SD   + ELP   +NL  L  L +  C  L++LP  
Sbjct: 584 ----------PPLAKNFNTL--YLSDIPSLVELPCGIQNLKKLMELSIRRCKNLESLPTG 631

Query: 606 IGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHI 665
             + +YL Y                       LD S C  L SFP       S +  L +
Sbjct: 632 -ANFKYLDY-----------------------LDLSGCSKLRSFPDIS----STISCLCL 663

Query: 666 SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
           +   + E+P  I     + + YL+      L  +   + +L+ +   DF+   +L E+  
Sbjct: 664 NRTGIEEVPSWIENF--VRLTYLTMLECNKLKYVSLNIFKLKHLDKADFSDCGTLTEVSW 721

Query: 726 CLKYL 730
           C K +
Sbjct: 722 CNKTI 726


>gi|51477387|gb|AAU04760.1| MRGH12 [Cucumis melo]
          Length = 1007

 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 242/788 (30%), Positives = 380/788 (48%), Gaps = 125/788 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE-KLEVAGPNIP 78
           KTT+AKA+F   + EF GSC + +V+   +   GL  LQ+++LS TL   K+++      
Sbjct: 230 KTTIAKAVFKSVAREFHGSCILENVKKTLKNVRGLVSLQEKLLSDTLMRGKVQIKDGEGV 289

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K+ +   K+ +VLDDV+   Q+K L G  + FG GSRI++TTRD+ +L     + + 
Sbjct: 290 EMIKKNLGNRKVFVVLDDVDHFSQVKDLAGGEEWFGCGSRIIITTRDEGLLLSLGIDIR- 348

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            Y V     EEA + FC+ AF      +         V Y +G PL ++ LG SL  +  
Sbjct: 349 -YNVESFGDEEALQLFCHEAFGVKFPKKGYLDLCMPFVEYAEGLPLAIKALGHSLHNRLF 407

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKD-----FV 253
             W   +  LN    S    +Y+ LKIS++ L    + IFL IACF +G+ KD     FV
Sbjct: 408 KSWEGAIRKLN---NSLNRQVYENLKISYDALGKEERRIFLYIACFLKGQSKDQVIDTFV 464

Query: 254 ASILD------------------DSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
           +  +D                  ++ +D L  L +KSL+++  + + MH++ Q++G++I 
Sbjct: 465 SFEIDAADGLLTRKKAADVLCIKETAADALKKLQEKSLITVVNDKIQMHNLHQKLGQEIF 524

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           R+ES +   K SRLW  ++++  L+H +G +AIE I LD ++    +L+ + F+ M+ L+
Sbjct: 525 REESSR---KSSRLWHREDMNHALRHKQGVEAIETIALDSNEHGESHLNTKFFSAMTGLK 581

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
           + + +                       V L   L+YL  KLR L W  YP R LPS+F+
Sbjct: 582 VLRVH----------------------NVFLSGDLEYLSSKLRLLSWHGYPFRNLPSDFQ 619

Query: 416 PKNLVELNLRCSKVEQPW-EGEK---------------------ACVPS----------- 442
           P  L+ELNL+ S +E  W E EK                     + VP+           
Sbjct: 620 PNELLELNLQNSCIENFWRETEKLDKLKVINLSNSKFLLKTPDLSTVPNLERLVLNGCIR 679

Query: 443 ------SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV-- 494
                 S+   K+L  L  K C+SL+S  SN+       +  S C  L  FP+I G +  
Sbjct: 680 LQELHLSVGILKHLIFLDLKDCKSLKSICSNISLESLKILILSGCSRLENFPEIVGNMKL 739

Query: 495 -TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
            T L+L  +AI ++ +SI  LT L +LDLR CK L  +  +   L S+  L L GC  L+
Sbjct: 740 LTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAIGCLTSIKHLALGGCSKLD 799

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
             P+ L  +  LK++    T I+ +P S   L  L+ L   +C  L        S +  +
Sbjct: 800 QIPDSLGNISCLKKLDVSGTSISHIPLSLRLLTNLKAL---NCKGL--------SRKLCH 848

Query: 614 YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD--YAVR 671
            +    S     P +          ++SH  GL     T      ++ +L+ SD   A  
Sbjct: 849 SLFPLWST----PRN----------NNSHSFGLRLI--TCFSNFHSVKVLNFSDCKLADG 892

Query: 672 EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
           +IP +++ LSSL  L LS N F +LP  + Q+  LR + L++ + L+SLP+ P+ L Y+ 
Sbjct: 893 DIPDDLSCLSSLHFLDLSRNLFTNLPNSLGQLINLRCLVLDNCSRLRSLPKFPVSLLYVL 952

Query: 732 LIDCKMLQ 739
             DC  L+
Sbjct: 953 ARDCVSLK 960


>gi|30696077|ref|NP_851172.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|110737797|dbj|BAF00837.1| hypothetical protein [Arabidopsis thaliana]
 gi|332008724|gb|AED96107.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1229

 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 283/980 (28%), Positives = 454/980 (46%), Gaps = 159/980 (16%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S+  ++VGI G  GIGKTT+A+ ++ + S +F+   F S  R N +  G     ++Q LS
Sbjct: 203  SEEARMVGILGPSGIGKTTIARILYSKLSSQFDYHVFGSFKRTNQDNYGMKLSWEEQFLS 262

Query: 64   TTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
              L +K L+++   +    K+R++  K+LIVLDDV+ +  LK L+G+   FG GSRI+VT
Sbjct: 263  EILDQKDLKISQLGV---VKQRLKHKKVLIVLDDVDNLELLKTLVGQTGWFGPGSRIIVT 319

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            T+D+ +L+  + +   IY V     + A    C  AF  N  P+     +  V       
Sbjct: 320  TQDRILLKSHKIDH--IYEVGYPSRKLALRILCRSAFDRNSPPDGFMQLANEVTELVGNL 377

Query: 183  PLVLEVLGSSLCLKRKSHWGKVLHDL-NRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L ++GSSL  + K  W +++  L N + + EI      L++S+++L    + IFL I
Sbjct: 378  PLALNIMGSSLKGRDKEEWIEMMPSLRNSLVDGEI---LKTLRVSYDRLHGNYQEIFLYI 434

Query: 242  ACFFEGEDKDFVASILDDSESDVLDILIDKSLVSIS--GNFLNMHDILQEMGRQIVRQES 299
            AC       +++ S+L D+    L IL +KSL+ IS     + MH +LQ++GR+IVR ES
Sbjct: 435  ACLLNCCGVEYIISMLGDNAIIGLKILAEKSLIHISPLDKTVEMHSLLQKLGRKIVRDES 494

Query: 300  EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLFK 358
               PGKR  L D ++I  V   N GT+ + GI L+  +I G +++D ++F  M NL+  K
Sbjct: 495  FGNPGKRRFLLDAEDICDVFTDNTGTETVLGISLNTLEINGTLSVDDKSFQGMHNLQFLK 554

Query: 359  FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
             +       E     S E  LS     LP GL+ LP+KLR LHW  +PLR +PSNFK + 
Sbjct: 555  VF-------ENWRRGSGEGILS-----LPQGLNSLPRKLRLLHWYKFPLRCMPSNFKAEY 602

Query: 419  LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
            LV L +  S++E+ WEG         Q    L  +     ++L+  P           + 
Sbjct: 603  LVNLEMAYSQLERLWEG--------TQQLGSLKKMDLSKSENLKEIP-----------DL 643

Query: 479  SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
            SY VNL E    S K         ++  +PSS+  L  L VL +  C  ++ + T    L
Sbjct: 644  SYAVNLEEMDLCSCK---------SLVTLPSSVRNLDKLRVLRMSSCSNVEVLPTDL-NL 693

Query: 539  RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF-ENLPGLEVLFVEDCS 597
             SL  L L  C  L  FP+I   +  L       T I E  S + EN+  L  L  + C 
Sbjct: 694  ESLDLLNLEDCSQLRSFPQISRNISILNL---SGTAIDEESSLWIENMSRLTHLRWDFC- 749

Query: 598  KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGL 657
             L +LP N    E+L  +    S + +L         L ++D S  + L+ FP       
Sbjct: 750  PLKSLPSNFRQ-EHLVSLHMTHSKLEKLWEGAQPFGNLVNIDLSLSEKLKEFPN------ 802

Query: 658  SAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNM 716
                               ++ +++L+ L L G  +  ++P+ I+ +S+L  +++     
Sbjct: 803  -------------------LSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTG 843

Query: 717  LQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLED 776
            L++LP   + L+ LH                  +LDL+GC+ L + P++   ++ L L+D
Sbjct: 844  LEALPT-DVNLESLH------------------TLDLSGCSKLTTFPKISRNIERLLLDD 884

Query: 777  CNMLRSLPELP------LCLQLLTVRNCNRLQSLPEILLCLQEL---------------D 815
                 ++ E+P        L  L+++ C RL+++   +  L+ +               D
Sbjct: 885  T----AIEEVPSWIDDFFELTTLSMKGCKRLRNISTSICELKCIEVANFSDCERLTEFDD 940

Query: 816  ASVLEKLSKHSPDLQWAPESL-----------KSAAIC---FEFTNCLK--LNGKANNKI 859
            AS++ ++ +   DL    E             K  +IC   F++   L    N    + I
Sbjct: 941  ASMVRRILRTIDDLIALYEEASFLHAIFVLCRKLVSICAMVFKYPQALSYFFNSPEADLI 1000

Query: 860  LADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
             A+          +SL    E  I E          VLPG ++P+ F NQ+ GSS+ I L
Sbjct: 1001 FANC---------SSLDRDAETLILES----NHGCAVLPGGKVPNCFMNQACGSSVSIPL 1047

Query: 920  PPHSSCRNLIGFAFCAVLDS 939
                     +GF  C VL++
Sbjct: 1048 HESYYSEEFLGFKACIVLET 1067


>gi|9758205|dbj|BAB08679.1| disease resistance protein; strong similarity to TMV resistance
            protein N [Arabidopsis thaliana]
          Length = 1239

 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 284/980 (28%), Positives = 454/980 (46%), Gaps = 159/980 (16%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S+  ++VGI G  GIGKTT+A+ ++ + S +F+   F S  R N +  G     ++Q LS
Sbjct: 203  SEEARMVGILGPSGIGKTTIARILYSKLSSQFDYHVFGSFKRTNQDNYGMKLSWEEQFLS 262

Query: 64   TTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
              L +K L+++   +    K+R++  K+LIVLDDV+ +  LK L+G+   FG GSRI+VT
Sbjct: 263  EILDQKDLKISQLGV---VKQRLKHKKVLIVLDDVDNLELLKTLVGQTGWFGPGSRIIVT 319

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            T+D+ +L+  + +   IY V     + A    C  AF  N  P+     +  V       
Sbjct: 320  TQDRILLKSHKIDH--IYEVGYPSRKLALRILCRSAFDRNSPPDGFMQLANEVTELVGNL 377

Query: 183  PLVLEVLGSSLCLKRKSHWGKVLHDL-NRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L ++GSSL  + K  W +++  L N + + EI      L++S+++L    + IFL I
Sbjct: 378  PLALNIMGSSLKGRDKEEWIEMMPSLRNSLVDGEI---LKTLRVSYDRLHGNYQEIFLYI 434

Query: 242  ACFFEGEDKDFVASILDDSESDVLDILIDKSLVSIS--GNFLNMHDILQEMGRQIVRQES 299
            AC       +++ S+L D+    L IL +KSL+ IS     + MH +LQ++GR+IVR ES
Sbjct: 435  ACLLNCCGVEYIISMLGDNAIIGLKILAEKSLIHISPLDKTVEMHSLLQKLGRKIVRDES 494

Query: 300  EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLFK 358
               PGKR  L D ++I  V   N GT+ + GI L+  +I G +++D ++F  M NL+  K
Sbjct: 495  FGNPGKRRFLLDAEDICDVFTDNTGTETVLGISLNTLEINGTLSVDDKSFQGMHNLQFLK 554

Query: 359  FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
             +       E     S E  LS     LP GL+ LP+KLR LHW  +PLR +PSNFK + 
Sbjct: 555  VF-------ENWRRGSGEGILS-----LPQGLNSLPRKLRLLHWYKFPLRCMPSNFKAEY 602

Query: 419  LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
            LV L +  S++E+ WEG         Q    L  +     ++L+  P           + 
Sbjct: 603  LVNLEMAYSQLERLWEG--------TQQLGSLKKMDLSKSENLKEIP-----------DL 643

Query: 479  SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
            SY VNL E    S K         ++  +PSS+  L  L VL +  C  ++ + T    L
Sbjct: 644  SYAVNLEEMDLCSCK---------SLVTLPSSVRNLDKLRVLRMSSCSNVEVLPTDL-NL 693

Query: 539  RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF-ENLPGLEVLFVEDCS 597
             SL  L L  C  L  FP+I   +  L       T I E  S + EN+  L  L  + C 
Sbjct: 694  ESLDLLNLEDCSQLRSFPQISRNISILNL---SGTAIDEESSLWIENMSRLTHLRWDFC- 749

Query: 598  KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGL 657
             L +LP N    E+L  +    S + +L         L ++D S  + L+ FP       
Sbjct: 750  PLKSLPSNFRQ-EHLVSLHMTHSKLEKLWEGAQPFGNLVNIDLSLSEKLKEFPN------ 802

Query: 658  SAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNM 716
                               ++ +++L+ L L G  +  ++P+ I+ +S+L  +++     
Sbjct: 803  -------------------LSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTG 843

Query: 717  LQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLED 776
            L++LP   + L+ LH                  +LDL+GC+ L + P++   ++ L L+D
Sbjct: 844  LEALPT-DVNLESLH------------------TLDLSGCSKLTTFPKISRNIERLLLDD 884

Query: 777  CNMLRSLPELP------LCLQLLTVRNCNRLQSLPEI---LLCLQEL------------D 815
                 ++ E+P        L  L+++ C RL+++      L C++              D
Sbjct: 885  T----AIEEVPSWIDDFFELTTLSMKGCKRLRNISTSICELKCIEVANFSDCERLTEFDD 940

Query: 816  ASVLEKLSKHSPDLQWAPESL-----------KSAAIC---FEFTNCLK--LNGKANNKI 859
            AS++ ++ +   DL    E             K  +IC   F++   L    N    + I
Sbjct: 941  ASMVRRILRTIDDLIALYEEASFLHAIFVLCRKLVSICAMVFKYPQALSYFFNSPEADLI 1000

Query: 860  LADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
             A+          +SL    E  I E          VLPG ++P+ F NQ+ GSS+ I L
Sbjct: 1001 FANC---------SSLDRDAETLILES----NHGCAVLPGGKVPNCFMNQACGSSVSIPL 1047

Query: 920  PPHSSCRNLIGFAFCAVLDS 939
                     +GF  C VL++
Sbjct: 1048 HESYYSEEFLGFKACIVLET 1067


>gi|30696080|ref|NP_199976.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008725|gb|AED96108.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1175

 Score =  293 bits (749), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 283/980 (28%), Positives = 454/980 (46%), Gaps = 159/980 (16%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S+  ++VGI G  GIGKTT+A+ ++ + S +F+   F S  R N +  G     ++Q LS
Sbjct: 139  SEEARMVGILGPSGIGKTTIARILYSKLSSQFDYHVFGSFKRTNQDNYGMKLSWEEQFLS 198

Query: 64   TTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
              L +K L+++   +    K+R++  K+LIVLDDV+ +  LK L+G+   FG GSRI+VT
Sbjct: 199  EILDQKDLKISQLGV---VKQRLKHKKVLIVLDDVDNLELLKTLVGQTGWFGPGSRIIVT 255

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            T+D+ +L+  + +   IY V     + A    C  AF  N  P+     +  V       
Sbjct: 256  TQDRILLKSHKIDH--IYEVGYPSRKLALRILCRSAFDRNSPPDGFMQLANEVTELVGNL 313

Query: 183  PLVLEVLGSSLCLKRKSHWGKVLHDL-NRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L ++GSSL  + K  W +++  L N + + EI      L++S+++L    + IFL I
Sbjct: 314  PLALNIMGSSLKGRDKEEWIEMMPSLRNSLVDGEI---LKTLRVSYDRLHGNYQEIFLYI 370

Query: 242  ACFFEGEDKDFVASILDDSESDVLDILIDKSLVSIS--GNFLNMHDILQEMGRQIVRQES 299
            AC       +++ S+L D+    L IL +KSL+ IS     + MH +LQ++GR+IVR ES
Sbjct: 371  ACLLNCCGVEYIISMLGDNAIIGLKILAEKSLIHISPLDKTVEMHSLLQKLGRKIVRDES 430

Query: 300  EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLFK 358
               PGKR  L D ++I  V   N GT+ + GI L+  +I G +++D ++F  M NL+  K
Sbjct: 431  FGNPGKRRFLLDAEDICDVFTDNTGTETVLGISLNTLEINGTLSVDDKSFQGMHNLQFLK 490

Query: 359  FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
             +       E     S E  LS     LP GL+ LP+KLR LHW  +PLR +PSNFK + 
Sbjct: 491  VF-------ENWRRGSGEGILS-----LPQGLNSLPRKLRLLHWYKFPLRCMPSNFKAEY 538

Query: 419  LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
            LV L +  S++E+ WEG         Q    L  +     ++L+  P           + 
Sbjct: 539  LVNLEMAYSQLERLWEG--------TQQLGSLKKMDLSKSENLKEIP-----------DL 579

Query: 479  SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
            SY VNL E    S K         ++  +PSS+  L  L VL +  C  ++ + T    L
Sbjct: 580  SYAVNLEEMDLCSCK---------SLVTLPSSVRNLDKLRVLRMSSCSNVEVLPTDL-NL 629

Query: 539  RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF-ENLPGLEVLFVEDCS 597
             SL  L L  C  L  FP+I   +  L       T I E  S + EN+  L  L  + C 
Sbjct: 630  ESLDLLNLEDCSQLRSFPQISRNISILNL---SGTAIDEESSLWIENMSRLTHLRWDFCP 686

Query: 598  KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGL 657
             L +LP N    E+L  +    S + +L         L ++D S  + L+ FP       
Sbjct: 687  -LKSLPSNFRQ-EHLVSLHMTHSKLEKLWEGAQPFGNLVNIDLSLSEKLKEFPN------ 738

Query: 658  SAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNM 716
                               ++ +++L+ L L G  +  ++P+ I+ +S+L  +++     
Sbjct: 739  -------------------LSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTG 779

Query: 717  LQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLED 776
            L++LP   + L+ LH                  +LDL+GC+ L + P++   ++ L L+D
Sbjct: 780  LEALPT-DVNLESLH------------------TLDLSGCSKLTTFPKISRNIERLLLDD 820

Query: 777  CNMLRSLPELP------LCLQLLTVRNCNRLQSLPEILLCLQEL---------------D 815
                 ++ E+P        L  L+++ C RL+++   +  L+ +               D
Sbjct: 821  T----AIEEVPSWIDDFFELTTLSMKGCKRLRNISTSICELKCIEVANFSDCERLTEFDD 876

Query: 816  ASVLEKLSKHSPDLQWAPESL-----------KSAAIC---FEFTNCLK--LNGKANNKI 859
            AS++ ++ +   DL    E             K  +IC   F++   L    N    + I
Sbjct: 877  ASMVRRILRTIDDLIALYEEASFLHAIFVLCRKLVSICAMVFKYPQALSYFFNSPEADLI 936

Query: 860  LADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
             A+          +SL    E  I E          VLPG ++P+ F NQ+ GSS+ I L
Sbjct: 937  FANC---------SSLDRDAETLILES----NHGCAVLPGGKVPNCFMNQACGSSVSIPL 983

Query: 920  PPHSSCRNLIGFAFCAVLDS 939
                     +GF  C VL++
Sbjct: 984  HESYYSEEFLGFKACIVLET 1003


>gi|26449414|dbj|BAC41834.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1187

 Score =  293 bits (749), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 246/807 (30%), Positives = 381/807 (47%), Gaps = 162/807 (20%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ VGIWGM GIGKTTLAKA+FDQ S  F+ SCF+ D   +    G    L++Q+L    
Sbjct: 172 IRCVGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCLLEEQLLPGND 231

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
           +  ++++        ++R+   ++L+VLDDV      +  +   D  G GS I++T+RDK
Sbjct: 232 ATIMKLSS------LRDRLNSKRVLVVLDDVRNALVGESFLEGFDWLGPGSLIIITSRDK 285

Query: 127 RVLEKFRGEEKKIYRVNGLEFEEAFEHF-CNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
           +V         +IY V GL  +EA + F  + + KE+   ++L   S  V++Y  GNPL 
Sbjct: 286 QVF--CLCGINQIYEVQGLNEKEARQLFLLSASIKEDMGEQNLQELSVRVINYANGNPLA 343

Query: 186 LEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
           + V G  L  K+K S        L R        I D  K +++ L+   K+IF DIACF
Sbjct: 344 ISVYGRELKGKKKLSEMETAFLKLKR---RPPFKIVDAFKSTYDTLSDNEKNIFSDIACF 400

Query: 245 FEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F+GE+ ++V  +L+         +D+L+DK LV+IS N + +H + Q++GR+I+  E+  
Sbjct: 401 FQGENVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREIINGET-V 459

Query: 302 EPGKRSRLWDPKEISRVLKHN---------------KGTDAIEGIFLDLSKIKGINLDPR 346
           +  +R RLW+P  I  +L++N               +G++ IEG+FLD S ++  +L P 
Sbjct: 460 QIERRRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDTSNLR-FDLQPS 518

Query: 347 AFTNMSNLRLFKFYV--PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT 404
           AF NM NLRL K Y   P+ + +   P+ S               L  LP +LR LHW+ 
Sbjct: 519 AFKNMLNLRLLKIYCSNPEVHPVINFPTGS---------------LHSLPNELRLLHWEN 563

Query: 405 YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA---------CVPSSIQNF------KY 449
           YPL++LP NF P++LVE+N+  S++++ W G K          C    + +       + 
Sbjct: 564 YPLKSLPQNFDPRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLVDIDDLLKAEN 623

Query: 450 LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPS 509
           L  +  +GC  L++FP+    +    +N S C+ +    +I   + +L+L  + I  +P 
Sbjct: 624 LEVIDLQGCTRLQNFPAAGRLLRLRVVNLSGCIKIKSVLEIPPNIEKLHLQGTGILALP- 682

Query: 510 SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY 569
                                +ST     R LV         L   P + E++E L    
Sbjct: 683 ---------------------VSTVKPNHRELVNF-------LTEIPGLSEELERL---- 710

Query: 570 SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSV 629
              T + E  SS ++L  L  L ++DCS L +LP N+ +L+                   
Sbjct: 711 ---TSLLESNSSCQDLGKLICLELKDCSCLQSLP-NMANLD------------------- 747

Query: 630 ALSNMLRSLDSSHCKGLES---FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL 686
                L  LD S C  L S   FPR        +  L++   A+RE+PQ      SLEIL
Sbjct: 748 -----LNVLDLSGCSSLNSIQGFPR-------FLKQLYLGGTAIREVPQ---LPQSLEIL 792

Query: 687 YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF 746
              G+   SLP     M+ L F                  LK L L  C  L+++   P 
Sbjct: 793 NAHGSCLRSLP----NMANLEF------------------LKVLDLSGCSELETIQGFPR 830

Query: 747 CLESLDLTGCNMLRSLPELPLCLQYLN 773
            L+ L   G   LR +P+LPL L+ LN
Sbjct: 831 NLKELYFAG-TTLREVPQLPLSLEVLN 856



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)

Query: 220  YDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI 276
            Y++L++S++ L    K +FL IA  F  ED DFVA ++   + DV   L +L D SL+S+
Sbjct: 1084 YEVLRVSYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLADVSLISV 1143

Query: 277  SGNF-LNMHDILQEMGRQIVRQES 299
            S N  + MH + ++MG++I+  +S
Sbjct: 1144 SSNGEIVMHSLQRQMGKEILHGQS 1167



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 169/420 (40%), Gaps = 76/420 (18%)

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAIS 623
           L+ ++ +  P+  LP +F+  P   V      S+L  L     +LE L  I L  +  + 
Sbjct: 556 LRLLHWENYPLKSLPQNFD--PRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLV 613

Query: 624 QLPSSVALSNMLRSLDSSHCKGLESFPRTF-LLGLSAMGLLH-ISDYAVREIPQEIAYLS 681
            +   +   N L  +D   C  L++FP    LL L  + L   I   +V EIP  I    
Sbjct: 614 DIDDLLKAEN-LEVIDLQGCTRLQNFPAAGRLLRLRVVNLSGCIKIKSVLEIPPNI---- 668

Query: 682 SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL----------- 730
             E L+L G    +LP     +S ++  H E  N L  +P L   L+ L           
Sbjct: 669 --EKLHLQGTGILALP-----VSTVKPNHRELVNFLTEIPGLSEELERLTSLLESNSSCQ 721

Query: 731 --------HLIDCKMLQSLPVLP-FCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLR 781
                    L DC  LQSLP +    L  LDL+GC+ L S+   P  L+ L L     +R
Sbjct: 722 DLGKLICLELKDCSCLQSLPNMANLDLNVLDLSGCSSLNSIQGFPRFLKQLYLGG-TAIR 780

Query: 782 SLPELPLCLQLLTVRNCNRLQSLPEI--LLCLQELDAS------VLEKLSKHSPDLQWAP 833
            +P+LP  L++L     + L+SLP +  L  L+ LD S       ++   ++  +L +A 
Sbjct: 781 EVPQLPQSLEILNAHG-SCLRSLPNMANLEFLKVLDLSGCSELETIQGFPRNLKELYFAG 839

Query: 834 ESLKSA--------------------AICFEFTNCLKLNGKANNKILADSLLRIRHMAIA 873
            +L+                       + ++F N   L+ +  N  L  +L  ++H+   
Sbjct: 840 TTLREVPQLPLSLEVLNAHGSDSEKLPMHYKFNNFFDLSQQVVNDFLLKTLTYVKHIP-- 897

Query: 874 SLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAF 933
               GY   +  K      S    P     +   +  SGSS+  +L  HS    L+GF  
Sbjct: 898 ---RGYTQELINKAPTFSFS---APSHTNQNATFDLQSGSSVMTRL-NHSWRNTLVGFGM 950


>gi|255558310|ref|XP_002520182.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223540674|gb|EEF42237.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1349

 Score =  293 bits (749), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 254/831 (30%), Positives = 393/831 (47%), Gaps = 146/831 (17%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML- 62
            + V+++GI+GMGG GK+TLAKA+F++    FE   F+S++R  S    GL+ LQK+++ 
Sbjct: 207 GNGVKVMGIYGMGGAGKSTLAKALFNKLVMHFERRSFISNIRETSNQKDGLDALQKRLIR 266

Query: 63  --------STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
                   + +L E L+   P              +LIVLDD+++  QL  L G+     
Sbjct: 267 DLSPDSAANVSLREVLQTQKP--------------VLIVLDDIDDTIQLHLLAGKRRWIY 312

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAF-KENHCPEDLNWHSR 173
           +GSRI++TTRD + +    G    +Y + GL+F EA + F   AF +E   PE  +  S+
Sbjct: 313 EGSRIIITTRDIQTIRA--GIVDVVYEMRGLDFPEAVQLFSYHAFGREKPLPEFADI-SQ 369

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKR-KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
            +VS T   PL LEV GSSL  KR K+ W +    L +        + ++L+ISFN L  
Sbjct: 370 KIVSRTGNLPLALEVFGSSLFDKRTKNLWVEAFEKLEQNPPGP-GRLQEVLEISFNGLDD 428

Query: 233 RVKSIFLDIACFF-----EGEDKDFVASILDDSESDVLDILIDKSLVSISGN-FLNMHDI 286
           + K  FLDIACFF     E E+  +V      +   ++  L  KSL+ I  N FL +HD 
Sbjct: 429 QQKCAFLDIACFFIKQTMEKEEIVYVLKGYGFAAETLIRDLAAKSLIKIIENDFLWIHDQ 488

Query: 287 LQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL---------SK 337
           L++MGR+IV++ES  +PG RSRLWD  +I  VLK+ KGT  I+GI LD+           
Sbjct: 489 LRDMGRRIVQRES-PDPGNRSRLWDFNDILSVLKNEKGTRNIQGIALDIETNRYEASTGD 547

Query: 338 IKGINLDPRAFTNMSNLRLFKFYVPKFY--------EIEKLPSMSTEEQLSYSKVQLPNG 389
           I  +N   R   N + + L + Y  +F+        + E    M     L  + V L   
Sbjct: 548 IYWMNFRRRPTFNSAIMYLKEIYKNRFHNGAANIILKTESFKQMVNLRYLQINDVVLNGN 607

Query: 390 LDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY 449
              +P ++++L W    L  LPS F  ++L  L+L  SK+ + W+ +  C        + 
Sbjct: 608 FKQMPAEVKFLQWRGCSLENLPSEFCMQHLAVLDLSHSKIRKLWK-QSWCT-------ER 659

Query: 450 LSALSFKGCQSLRSFPS-NLHFVCPVTINFSYCVNLIEFPQISGKVTRLY----LGQSAI 504
           L  L+ + C  L + P  ++H      I    C  L++  +  G + +L      G S +
Sbjct: 660 LLLLNLQNCYHLTALPDLSVHSALEKLI-LENCKALVQIHKSVGDLKKLIHLNLKGCSNL 718

Query: 505 EEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEH 564
            E PS +  L  LE+LDL GC ++K++                        P+ +  M++
Sbjct: 719 TEFPSDVSGLKLLEILDLTGCPKIKQL------------------------PDDMRSMKN 754

Query: 565 LKRIYSDRTPIT-----------------------------------------------E 577
           L+ +  D T I                                                E
Sbjct: 755 LRELLLDETAIVKLPDSIFHLKELRKLSLKGCWLLRHVSVHIGKLTSLQELSLDSSGLEE 814

Query: 578 LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
           +P S  +L  LE+L +  C  L  +PD+I +LE L  +   +S+I +LP+S+     L+S
Sbjct: 815 IPDSIGSLSNLEILNLARCKSLIAIPDSISNLESLIDLRLGSSSIEELPASIGSLCHLKS 874

Query: 638 LDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN--NFES 695
           L  SHC+ L   P + + GL+++  L +   +V EIP ++  LS L  L++ GN  +   
Sbjct: 875 LSVSHCQSLSKLPDS-IGGLASLVELWLEGTSVTEIPDQVGTLSMLRKLHI-GNCMDLRF 932

Query: 696 LPAIIKQMSQLRFIHLEDFNMLQSLP---ELPLCLKYLHLIDCKMLQSLPV 743
           LP  I +M  L  + L D++M+  LP   E+   L  L L  CK LQ LP 
Sbjct: 933 LPESIGKMLNLTTLIL-DYSMISELPESIEMLESLSTLMLNKCKQLQRLPA 982



 Score =  133 bits (334), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 130/425 (30%), Positives = 196/425 (46%), Gaps = 68/425 (16%)

Query: 407  LRTLPSNFKP-KNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLR--- 462
            ++ LP + +  KNL EL L  + + +        +P SI + K L  LS KGC  LR   
Sbjct: 742  IKQLPDDMRSMKNLRELLLDETAIVK--------LPDSIFHLKELRKLSLKGCWLLRHVS 793

Query: 463  --------------------SFPSNLHFVCPVTI-NFSYCVNLIEFPQ-ISG--KVTRLY 498
                                  P ++  +  + I N + C +LI  P  IS    +  L 
Sbjct: 794  VHIGKLTSLQELSLDSSGLEEIPDSIGSLSNLEILNLARCKSLIAIPDSISNLESLIDLR 853

Query: 499  LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG---------- 548
            LG S+IEE+P+SI  L  L+ L +  C+ L ++  S   L SLV L L G          
Sbjct: 854  LGSSSIEELPASIGSLCHLKSLSVSHCQSLSKLPDSIGGLASLVELWLEGTSVTEIPDQV 913

Query: 549  -------------CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
                         C++L   PE + KM +L  +  D + I+ELP S E L  L  L +  
Sbjct: 914  GTLSMLRKLHIGNCMDLRFLPESIGKMLNLTTLILDYSMISELPESIEMLESLSTLMLNK 973

Query: 596  CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA-LSN-MLRSLDSSHCKGLESFPRTF 653
            C +L  LP +IG+L+ L ++    +++S+LP  +  LSN M+  +   H + L+      
Sbjct: 974  CKQLQRLPASIGNLKRLQHLYMEETSVSELPDEMGMLSNLMIWKMRKPHTRQLQDTASVL 1033

Query: 654  LLGLSAMGLLHISDYA----VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
               LS + LL   D         +P E   LSSL+ L  S N+   LP+ ++ +S L+ +
Sbjct: 1034 PKSLSNLSLLEHLDACGWAFFGAVPDEFDKLSSLQTLNFSHNSICCLPSRLRGLSILKNL 1093

Query: 710  HLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF--CLESLDLTGCNMLRSLPELPL 767
             L D   L+SLP LP  L  L + +C  L+S+  L     L+ LDLT CN +  +P L  
Sbjct: 1094 ILADCKQLKSLPLLPSSLVNLIVANCNALESVCDLANLQSLQDLDLTNCNKIMDIPGLE- 1152

Query: 768  CLQYL 772
            CL+ L
Sbjct: 1153 CLKSL 1157


>gi|297850936|ref|XP_002893349.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297339191|gb|EFH69608.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1401

 Score =  292 bits (748), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 307/1101 (27%), Positives = 475/1101 (43%), Gaps = 216/1101 (19%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            +S+  VQ +G++GMGGIGKTTLAK+ +++    F+   F+  VR  S    GL +LQK  
Sbjct: 215  ESTSGVQTLGLYGMGGIGKTTLAKSFYNKIIVNFKHRVFIESVREKSSDQDGLVNLQK-- 272

Query: 62   LSTTLSEKLEVAGPNIPHFTK------ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
               TL ++L    P I   ++      E V   K ++VLDDV+ + Q+  L+GE   +G+
Sbjct: 273  ---TLIKELFGLVPEIEDVSRGLEKIEENVHEKKTIVVLDDVDHIDQVNALVGETKWYGE 329

Query: 116  GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
            GS IV+TTRD  +L K    ++  Y V  L   +A + F   + ++   P++L   S  +
Sbjct: 330  GSLIVITTRDSEILSKLSVNQQ--YEVKCLTEPQALKLFSYHSLRKEKPPKNLLELSTKI 387

Query: 176  VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
            V      PL +EV GS L  K ++ W     +L ++  ++   ++ +L +SF  L    K
Sbjct: 388  VRILGLLPLAVEVFGSHLYDKDENEWPV---ELEKLTNTQPDKLHCVLALSFESLDDEEK 444

Query: 236  SIFLDIACFFEGED--KDFVASILDD---SESDVLDILIDKSLVSI-SGNFLNMHDILQE 289
             IFLDIAC F   +  KD +  IL     +    L +LI KSLV+I   + L MHD +++
Sbjct: 445  KIFLDIACLFLKMEITKDELVDILKGCGFNAEAALRVLIQKSLVTIMKDDTLWMHDQIRD 504

Query: 290  MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK--IKGINLDPRA 347
            MGRQ+V +E   +P  +SRLWD  EI  VL + KGT +I GI  D  K  ++    D   
Sbjct: 505  MGRQMVLRECSDDPEMQSRLWDRGEIMNVLDYMKGTSSIRGIVFDFKKKFVRDPTADEIV 564

Query: 348  FTNMSN---------------LRLFKFYVPKFYEI----EKLPSMSTEEQLSYSKVQLPN 388
              N+ N               +R      PK  EI    E    M     L  + V+L  
Sbjct: 565  SRNLRNNPGLNFVCNYLRNIFIRFRAEEKPKRSEITIPVEPFVPMKKLRLLQINNVELEG 624

Query: 389  GLDYLPKKLRYLHWDTYPL-------------------------RTLPSNFKPKNLVELN 423
             L  LP +L+++ W   PL                         +TLPS    +NL  +N
Sbjct: 625  NLKLLPSELKWIQWKGCPLENLPPDILARQLGVLDLSESGIRRVQTLPSKKVDENLKVIN 684

Query: 424  LR-CSKVEQ--PWEGEKAC-------------VPSSIQNFKYLSALSFKGCQSLRSFPSN 467
            LR C  ++        KA              VP S+ N + L  L  + C  L  F  +
Sbjct: 685  LRGCHSLKAIPDLSNHKALEKLVFERCNLLVKVPRSVGNLRKLLQLDLRRCSKLSEFLVD 744

Query: 468  LH-FVCPVTINFSYCVNLIEFPQISGKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLR 523
            +    C   +  S C NL   P+  G +     L L  +AI  +P SI  L  LE L L 
Sbjct: 745  VSGLKCLEKLFLSGCSNLSVLPENIGSMPCLKELLLDGTAISNLPDSIFRLQKLEKLSLM 804

Query: 524  GCKRLKRISTSFCKLRSLVTLIL-----------------------LGCLNLEHFPEILE 560
            GC+ ++ + +   KL SL  L L                       + C +L   P+ + 
Sbjct: 805  GCRSIQELPSCLGKLTSLEDLYLDDTALRNLPISIGDLKNLQKLHLMRCTSLSKIPDTIN 864

Query: 561  KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAAS 620
            K+  LK ++ + + + ELP    +L  L+ L   DC  L  +P +IG L +L  +   ++
Sbjct: 865  KLISLKELFINGSAVEELPLVTGSLLCLKDLSAGDCKSLKQVPSSIGGLNFLLQLQLNST 924

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRT----------FLLG------------LS 658
             I  LP  +   + +R L+  +CK L++ P +          +L G            L 
Sbjct: 925  PIESLPEEIGDLHFIRQLELRNCKSLKALPESIGKMDTLHNLYLEGSNIEKLPKDFGKLE 984

Query: 659  AMGLLHISD-YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL----------- 706
             + +L +++   ++ +P+    L SL  LY+       LP     +S+L           
Sbjct: 985  KLVVLRMNNCEKLKRLPESFGDLKSLRHLYMKETLVSELPESFGNLSKLMVLEMLKKPLF 1044

Query: 707  --------------RFIHLED-FNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESL 751
                          RF+ + + F+ L SL EL  C      I  K+   L  L   L  L
Sbjct: 1045 RISESNAPGTSEEPRFVEVPNSFSNLTSLEELDACSWR---ISGKIPDDLEKLS-SLMKL 1100

Query: 752  DLTGCNMLRSLPELPLCL---QYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEIL 808
            +L G N   SLP   + L   Q L+L DC  L+ LP LP  L+ L + NC  L+S+ +  
Sbjct: 1101 NL-GNNYFHSLPSSLVGLSNLQELSLRDCRELKRLPPLPCKLEHLNMANCFSLESVSD-- 1157

Query: 809  LCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIR 868
              L EL  ++LE L+                      TNC    GK  +    + L+ ++
Sbjct: 1158 --LSEL--TILEDLN---------------------LTNC----GKVVDIPGLEHLMALK 1188

Query: 869  HMAIASLRLGYEMAINEKLSE--------LRGSL-----IVLPGSEIPDWFSNQSSGSSI 915
             + +      Y +A+ ++LS+        LR SL     + LPG+ +PDWFS       +
Sbjct: 1189 RLYMTGCNSNYSLAVKKRLSKVIPRTSQNLRASLKMLRNLSLPGNRVPDWFSQ----GPV 1244

Query: 916  CIQLPPHSSCRNLIGFAFCAV 936
                 P+   R +I     A+
Sbjct: 1245 TFSAQPNKELRGVIIAVVVAL 1265


>gi|357499675|ref|XP_003620126.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495141|gb|AES76344.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1013

 Score =  292 bits (748), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 247/755 (32%), Positives = 365/755 (48%), Gaps = 98/755 (12%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D VQ+VGI+G+GG+GKTTLA+AI++    +FE  CF+ D+R  S    GLEHLQ+++LS 
Sbjct: 212 DRVQMVGIYGIGGLGKTTLARAIYNMIGDKFECLCFLHDLR-ESSAKHGLEHLQQKLLSK 270

Query: 65  T--LSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
           T  L  KL      IP   K+R+ R K+L++LDDV+ + QL+ + G LD FG GS +++T
Sbjct: 271 TVELDTKLGDVNEGIP-IIKQRLGRKKVLLILDDVDNMRQLQVMAGGLDWFGPGSIVIIT 329

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TRD+ +L    G  +K Y+V+ L   E+ E F   AFK++      +      ++Y  G 
Sbjct: 330 TRDQHLLTS-HGIHRK-YQVDALNRIESLELFRWKAFKDSIGDSRYDDILDRAIAYASGL 387

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PLVLE++G +L  K    W  +L    RI   EI +I   LKISF+ L    + +FLDIA
Sbjct: 388 PLVLELVGPALFGKNIEEWKSILDRYERIPNKEIQNI---LKISFDALEEDEQGVFLDIA 444

Query: 243 CFFEGED----KDFVASILDDSESDVLDILIDKSLVSI----SGNFLNMHDILQEMGRQI 294
           C F+G D    KD + +    S    + +L++K+L+ I    +   + +HD++++MG++I
Sbjct: 445 CCFKGYDLGEVKDILCAHHGQSIEYHIGVLVEKTLIQIIHLGTDAVVTLHDLIEDMGKEI 504

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VRQES KEPGKRSRLW  ++I +VL+ N GT  IE I+L              F     +
Sbjct: 505 VRQESPKEPGKRSRLWFYEDIVQVLEENSGTSQIEIIYLKFP----------LFEEEEEM 554

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
                +  K  E++K+ ++ T   L     +     + LP  LR L W  YP + LP +F
Sbjct: 555 EEEVEW--KGDELKKMKNLKT---LIIENGRFSRAPEQLPNSLRVLEWPGYPSQYLPHDF 609

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSI--QNFKYLSALSFKGCQSLRSFPSNLHFVC 472
            PK L       S  + P  G  +   SS   + F +L  L+    + L           
Sbjct: 610 CPKKL-------SICKLPGNGFTSFELSSSLKKRFVHLKKLNLDNSECLTQILDVSGLKN 662

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
            V  +F  C NL+                     +  SI  L  L++LD  GC  LK  S
Sbjct: 663 LVEFSFRKCENLV--------------------TIHDSIGFLNKLKILDAYGCSNLK--S 700

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
               KL SL  L L  C +LE FPEIL KME++  ++   T I ELP SF+NL  LE L 
Sbjct: 701 FPPLKLTSLEALGLSYCNSLERFPEILGKMENITDMFCVGTSIKELPFSFQNLTRLEKLR 760

Query: 593 VEDCSK------LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
           +    K      +  +P  +       +    A   S +PS V      R L    C   
Sbjct: 761 LWGDGKQILQSSILTMPKLLTDASGCLFPKQNAELSSIVPSDV------RILGLPKCNPS 814

Query: 647 ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
           + F                       +P  + + +++E L LS NNF  LP  ++Q   L
Sbjct: 815 DDF-----------------------LPIILTWFANVEHLDLSWNNFTVLPKCLEQCCLL 851

Query: 707 RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
             +++     L+ +  +P  LK L  + CK L S+
Sbjct: 852 SLLNVNSCKYLREIQGVPPKLKRLSALHCKSLTSM 886



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 110/264 (41%), Gaps = 52/264 (19%)

Query: 628 SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
           S+   N L+ LD+  C  L+SFP   L  L A+GL + +  ++   P+ +  + ++  ++
Sbjct: 680 SIGFLNKLKILDAYGCSNLKSFPPLKLTSLEALGLSYCN--SLERFPEILGKMENITDMF 737

Query: 688 LSGNNFESLPAIIKQMSQLRFIHL--EDFNMLQS----LPEL------------------ 723
             G + + LP   + +++L  + L  +   +LQS    +P+L                  
Sbjct: 738 CVGTSIKELPFSFQNLTRLEKLRLWGDGKQILQSSILTMPKLLTDASGCLFPKQNAELSS 797

Query: 724 --PLCLKYLHLIDCKMLQSLPVLPFCL------ESLDLTGCNMLRSLPELPLCLQ----- 770
             P  ++ L L  C    S   LP  L      E LDL+  N       LP CL+     
Sbjct: 798 IVPSDVRILGLPKCN--PSDDFLPIILTWFANVEHLDLSWNN----FTVLPKCLEQCCLL 851

Query: 771 -YLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL----DASVLEKLSKH 825
             LN+  C  LR +  +P  L+ L+  +C  L S+   +L  QEL     A  +   S  
Sbjct: 852 SLLNVNSCKYLREIQGVPPKLKRLSALHCKSLTSMSRRMLLNQELHEYGGAEFIFTRSTR 911

Query: 826 SPDLQWAPESLKSAAICFEFTNCL 849
            P  +W     +  +I F F N L
Sbjct: 912 FP--EWFEHQNRGPSISFWFRNKL 933


>gi|297804918|ref|XP_002870343.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316179|gb|EFH46602.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 966

 Score =  292 bits (748), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 280/895 (31%), Positives = 418/895 (46%), Gaps = 143/895 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGS-CFVSDVRGNSETAGGLEHLQK 59
           MD++D V+++ IWGMGGIGKTT+AK I++Q+ H F    CF+ +VR  S +  GL +LQ+
Sbjct: 110 MDANDEVRMIEIWGMGGIGKTTIAKYIYEQYKHRFSPHFCFIPNVRKIS-SKHGLLYLQE 168

Query: 60  QMLSTTLSE---KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           +++S  L E   KL        H  K R+  +K+ IVLDDV++V QL  L  E   FG G
Sbjct: 169 KLISNILGEEHVKLWSVEQG-AHCIKSRLGHLKVFIVLDDVDDVNQLYALAKEAKWFGLG 227

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP----EDLNWHS 172
           SRI+VTTRDK +L  F G    +Y V  ++ + A + F   AF+  H P    +DL   S
Sbjct: 228 SRIIVTTRDKSLLNNFCGVRIFVYDVKCMDNDNAIKLFEQVAFEGGHPPSHVYKDL---S 284

Query: 173 RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
             V    +G PL LE  G  L  K    W   L       E+   +I  ILKIS++ L  
Sbjct: 285 NRVSRLAQGLPLALEAFGFYLHGKSLMEWKDGLKSFE---EAPYENIMSILKISYDNLDE 341

Query: 233 RVKSIFLDIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGN-FLNMHDILQEMG 291
             K+ FL +AC F G+    V ++LD     + D L++KSL+ IS +  + MH ++++ G
Sbjct: 342 LGKTAFLHVACLFNGDPVLRVTTLLDCGRFGIRD-LVEKSLIDISTDGCIAMHGLVEQTG 400

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIK-GINLDPRAFTN 350
           R IV QES   P K+  LW P +I RVL +  GT  IEG+ LD+  +    +++  A   
Sbjct: 401 RHIVCQESGNRPAKQRILWHPDDIYRVLANYAGTRKIEGVALDVCVLPYSFHIEWNALEP 460

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M NL+  K Y           S  +E ++  +  + P     + +KLR LHWD Y   TL
Sbjct: 461 MYNLKFLKIYK---------HSKGSESRIRRNLEENP----IVSRKLRLLHWDAYSYTTL 507

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
           PS   P  LVELNL  SK+   W G    VP  +        L   GC+ L+  P     
Sbjct: 508 PSKVSPDCLVELNLCYSKLTSLWSG----VPRLLHL----RRLDLTGCEDLKELPDLHEA 559

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
           VC   +    C++L                    + +P SI  L+ ++ LD+  C  LK 
Sbjct: 560 VCLEELILEGCISL--------------------QRIPKSIWGLSRVKKLDVSNCDGLKN 599

Query: 531 I------------STSFCKLRSLVTLILLGCL-------------NLEHFPEILEKMEHL 565
           +             +S   +   V LI +  L             NL    EI  K+E L
Sbjct: 600 LRIILRESESTVFQSSISGMCLHVRLIHMEVLDPTPYEFEGISIPNLSINGEIKIKLELL 659

Query: 566 KRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQL 625
           +        ++E     + +P   ++      KL + P N  SL+ + +I +        
Sbjct: 660 EGYAEHLCFLSE-----QEIPHELMMLENQTPKLMSSPYNFKSLDIMRFICSER------ 708

Query: 626 PSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEI 685
                 SN+ +      C     FP      L  + L++++   + EIP +I ++  LE 
Sbjct: 709 ------SNLFK------CYSFSDFP-----WLRDLNLINLN---IEEIPDDIHHMMVLEK 748

Query: 686 LYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP 745
           L LSGN F  LP  +  ++ L+ + L +   L++LP+L   L+ L L DC  LQ+L  L 
Sbjct: 749 LDLSGNGFRVLPTTMILLTNLKHLTLCNCCRLETLPDL-YQLETLTLSDCTNLQALVNLS 807

Query: 746 --------FCLESLDLTGCNMLRSLPELPL---CLQYLNLEDCN---MLRSLPELPLCLQ 791
                   +CL  L L  C  ++SL +       L YL++   +   +  S+ +LPL L 
Sbjct: 808 DAQQDQSRYCLVELWLDNCKNVQSLSDQLTRFKSLTYLDISRHDFETVPTSIKDLPL-LV 866

Query: 792 LLTVRNCNRLQSLPEIL-LCLQELDA-------SVLEKLSKH---SPDLQWAPES 835
            L +  C +L+SL E+L L L+ L A       + +E    H   SP LQW  +S
Sbjct: 867 TLCLNYCKKLKSLKEVLPLSLKYLYAHGCKSLDAFIEYHVHHRDLSPCLQWKQDS 921


>gi|13517464|gb|AAK28803.1|AF310958_1 resistance-like protein P1-A [Linum usitatissimum]
          Length = 1200

 Score =  292 bits (747), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 272/888 (30%), Positives = 424/888 (47%), Gaps = 170/888 (19%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEG--SCFVSDVRGNSETAGGLEHLQ 58
            MD  D   I+G+WGMGG+GKTTLA+A +D+ +   +G    F+ +V    E   G++ + 
Sbjct: 198  MDKLDDTCIIGLWGMGGVGKTTLAEACYDRVTSSNKGIKHLFIRNVNEMCEKHHGVDKIV 257

Query: 59   KQMLSTTLSE-KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRL-IGEL----DQ 112
             ++ S  L E  ++    NI  + +ER+ R+++ +VLD+V  + QL++L +G +      
Sbjct: 258  HKLYSKLLDENNIDREDLNIA-YRRERLSRLRVFVVLDNVETLEQLEKLALGYVFNLSKV 316

Query: 113  FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNW-- 170
            F  GSRI++TTR+K+VL+       KIY V  L  +E+   F   AFK++  P+D NW  
Sbjct: 317  FAAGSRIIITTRNKKVLQNAMA---KIYNVECLNDKESIRLFSLHAFKQDR-PQD-NWMG 371

Query: 171  HSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
             SR   SY KGNPL L++LG +L  +   +W  +L  L    +S    +  IL+ S++KL
Sbjct: 372  KSRLATSYCKGNPLALKILGGALFDEDVHYWKSLLTGLR---QSGNLGMETILRRSYDKL 428

Query: 231  TPRVKSIFLDIACFFEGEDK----DFVASILDDSESDVLDILIDKSLV----SISGNFLN 282
                K IF+D+AC   G  +    D++A++   S   V D LIDKSL+    S +G  + 
Sbjct: 429  GKEEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVKVKD-LIDKSLLTCVPSENGEMIE 487

Query: 283  MHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLK---------------------- 320
            +HD+L+EM   IV++E +   GKRSRL DP ++ ++L                       
Sbjct: 488  VHDLLKEMAWNIVKEEPKL--GKRSRLVDPDDVHKLLSTSEVKSWSTSIVNLFKGIVMVI 545

Query: 321  -----------HNKGTDAI------EGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPK 363
                       H KG D +      EGI LDLS  K + L   AF  M++L   KF +P 
Sbjct: 546  PRRKRRKVTDMHEKGYDPLEEHRTTEGICLDLSGTKEMYLKANAFEGMNSLTFLKFELP- 604

Query: 364  FYEIEKLPSMSTEEQLSYSKVQLP-NGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
              EIE LP    +     +K+ LP +GL+ LP  LR+L WD YP ++LP+ F P++LV L
Sbjct: 605  --EIE-LPRYRLKN--VKTKIHLPYDGLNSLPDGLRWLQWDGYPSKSLPAKFYPQHLVHL 659

Query: 423  NLRCSKVEQPWEG--EKACVPSSIQNFKYLSAL---------------SFKGCQSLRSFP 465
             +R S +++ WEG  +   +   + + +Y + L                  GC+SL   P
Sbjct: 660  IIRDSPIQRCWEGYDQPQLLNLIVLDLRYCANLIAIPDISSSLNLEELLLFGCRSLVEVP 719

Query: 466  SNLHFVCP-VTINFSYCVNLIEFP-----------QISG-KVTR-----------LYLGQ 501
            S++ ++   VT++ S+C NL   P           ++ G  +TR             L  
Sbjct: 720  SDVQYLTKLVTLDISHCKNLKPLPPKLDSKLLKHVRMQGLGITRCPEIDSRELEEFGLSG 779

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN---LEHFPEI 558
            +++ E+PS+I  +    VL L G    K I T F  + +++    LG  +   ++HF + 
Sbjct: 780  TSLGELPSAIYNVKQNGVLRLHG----KNI-TKFPGITTILKFFSLGGTSIREIDHFADY 834

Query: 559  LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
                 H +   SD             LP    L++    +L+ LP++I ++      +  
Sbjct: 835  -----HQQHQTSDGLL----------LPRFHNLWLTGNRQLEVLPNSIWNMISEGLFICR 879

Query: 619  ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIA 678
            +  I  LP      N L SL+   C+ L S                        IP  I+
Sbjct: 880  SPLIESLPEISEPMNTLTSLEVVDCRSLTS------------------------IPTSIS 915

Query: 679  YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL---HLIDC 735
             L SL  LYL     +SLP+ I+++ QL  I L D   L+S+P     L  L    +  C
Sbjct: 916  NLRSLRSLYLVETGIKSLPSSIQELRQLYSIDLRDCKSLESIPNSIHKLSKLVTFSMSGC 975

Query: 736  KMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLN---LEDCNML 780
            + + SLP LP  L+ LD++ C  L++LP     L YLN    E+C  L
Sbjct: 976  ESIPSLPELPPNLKELDVSRCKSLQALPSNTCKLWYLNRIYFEECPQL 1023



 Score = 43.5 bits (101), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 22/115 (19%)

Query: 440  VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
            +PSSIQ  + L ++  + C+SL S P+++H                   ++S  VT    
Sbjct: 933  LPSSIQELRQLYSIDLRDCKSLESIPNSIH-------------------KLSKLVT---F 970

Query: 500  GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
              S  E +PS  E   +L+ LD+  CK L+ + ++ CKL  L  +    C  L+ 
Sbjct: 971  SMSGCESIPSLPELPPNLKELDVSRCKSLQALPSNTCKLWYLNRIYFEECPQLDQ 1025


>gi|297794601|ref|XP_002865185.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311020|gb|EFH41444.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1185

 Score =  292 bits (747), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 242/768 (31%), Positives = 367/768 (47%), Gaps = 143/768 (18%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGS-----CFVSDVRGNSETAGGLEHLQ 58
           S+ V++VGIWG  GIGKT++A+A+++Q S  F+GS      FV+  + N E+A   ++  
Sbjct: 204 SEEVRMVGIWGSSGIGKTSIARALYNQLSRRFQGSVFIDRAFVTKSKSNYESANPDDYNM 263

Query: 59  K-QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           K  +L + LSE L+     I H    +E + R K+LI +DD+++   L  L G+   FG 
Sbjct: 264 KLYLLRSFLSEILDKKNVRINHLGAAEETLNRRKVLIFIDDMDDQVVLDTLAGQAQWFGC 323

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           GSRI+V T+DK  L   R +   IY V     + A + FC  AFK+N  PE L     S 
Sbjct: 324 GSRIIVITKDKHFLRAHRIDH--IYEVCLPSKDLALKIFCRSAFKKNSPPEGL-MDLASE 380

Query: 176 VSYTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           V+   GN PL L+VLGS L  + K     ++  L R+  S    I   L++S++ L  + 
Sbjct: 381 VALCAGNLPLGLKVLGSYLRGRDKE---DLMDMLPRLRNSLDGKIEKTLRVSYDGLNDKK 437

Query: 235 -KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEM 290
            K+IF  IAC F GE  + +  +L DS  DV   L  L+DKSL+ +    + MH +LQEM
Sbjct: 438 DKAIFRHIACLFNGEKANDIKLLLADSGLDVNIGLKNLVDKSLIHVRKEIVEMHSLLQEM 497

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
           G++IVR +S  EPG+R  L D KEI  +L+ N GT  + GI LD+ +I  +++   AF  
Sbjct: 498 GKEIVRAQS-NEPGEREFLVDAKEICDLLEDNTGTKKVLGISLDMDEIDELHIHENAFKG 556

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M NL   KFY  K+            +Q +  +  LP G +YLP KLR L  D YP+R +
Sbjct: 557 MRNLIFLKFYTKKW------------DQKNEVRWHLPEGFNYLPHKLRLLRLDGYPMRHM 604

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKAC----------------VPS------------ 442
           PSNF+ +NLVEL++  SK+E+ WEG +                  +P+            
Sbjct: 605 PSNFRTENLVELHMPGSKLERLWEGVQELKGLKTINLHRSKNLKEIPNLSMATNLEELHL 664

Query: 443 -----------SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS 491
                      S+Q    L +L   GC +L   P+ ++     ++N   C  L  FP IS
Sbjct: 665 GDCSSLVELSSSVQYLNKLKSLVMSGCINLEILPTGINLQSLFSLNLKGCSGLKIFPNIS 724

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
             ++ L L +++IEE PS++              +    +  S C+++S         L 
Sbjct: 725 TNISWLILDETSIEEFPSNL--------------RLDNLLLLSMCRMKSQKLWDRKQPLT 770

Query: 552 --LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
             +   P  LE++       SD   + ++PSS +N   L+ L +EDC  L+ LP  I   
Sbjct: 771 PLMAMLPHSLEEL-----FLSDIPSLVDIPSSIQNFTHLDCLGIEDCINLETLPTGIN-- 823

Query: 610 EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA 669
                                  + L SL+ S C  L++FP             +IS   
Sbjct: 824 ----------------------FHHLESLNLSGCSRLKTFP-------------NIS--- 845

Query: 670 VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNML 717
                      +++E LYL     E +P  I++ ++L +I +E  N L
Sbjct: 846 -----------TNIEQLYLQRTGIEEVPWWIEKFTKLDYITMEKCNNL 882



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 61/104 (58%)

Query: 440 VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
           +PSSIQNF +L  L  + C +L + P+ ++F    ++N S C  L  FP IS  + +LYL
Sbjct: 794 IPSSIQNFTHLDCLGIEDCINLETLPTGINFHHLESLNLSGCSRLKTFPNISTNIEQLYL 853

Query: 500 GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVT 543
            ++ IEEVP  IE  T L+ + +  C  L R+S +  KL+ L+ 
Sbjct: 854 QRTGIEEVPWWIEKFTKLDYITMEKCNNLIRVSLNIYKLKRLMV 897


>gi|356545124|ref|XP_003540995.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1116

 Score =  292 bits (747), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 233/735 (31%), Positives = 354/735 (48%), Gaps = 116/735 (15%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           D  + V+IVGI+GMGGIGKTTLA  ++ + SH+++  CF+ +V       G    + KQ+
Sbjct: 243 DPVEDVRIVGIFGMGGIGKTTLASVLYHRISHQYDACCFIDNVSKVYRDCGP-TGVAKQL 301

Query: 62  LSTTLSEK-LEVAG-PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           L  TL+E+ L++    N  +  + R+R +K LIVLD+V+EV Q ++L+   +  G GSRI
Sbjct: 302 LHQTLNEENLQICNLHNAANLIQSRLRYVKTLIVLDNVDEVKQQEKLVLNREWLGAGSRI 361

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++ +RD   L+++      +Y+V  L   ++ + FC  AF  +         +  V+ Y 
Sbjct: 362 IIISRDMHNLKEY--GVTSVYKVQLLNGADSLKLFCKKAFNCDDIVGGYKELTYDVLKYA 419

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
              PL ++VLGS LC +  S W   L    R+ E+   DI D+L+IS++ L    K IFL
Sbjct: 420 NSLPLAIKVLGSFLCGRSVSEWRSALV---RLKENPNKDILDVLQISYDGLQELEKQIFL 476

Query: 240 DIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
           DIACFF G ++ +V  +LD     +++ + +L+DKSL+  S  F+ MHD+L+ +GR+IV+
Sbjct: 477 DIACFFSGYEELYVKKVLDCCGFHAEIGIRVLLDKSLIDNSHGFIEMHDLLKVLGRKIVK 536

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGI--NLDPRAFTNMSNL 354
             S  EP K SRLW PK+   + K  + T+  E I LD+S+  GI   ++  A + MSNL
Sbjct: 537 GNSPNEPRKWSRLWLPKDFYDMSKTTETTNN-EAIVLDMSREMGILMTIEAEALSKMSNL 595

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL   +  KF                         LD L  KL++L W  YP   LPS+F
Sbjct: 596 RLLILHDVKFM----------------------GNLDCLSNKLQFLQWFKYPFSNLPSSF 633

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
           +P  LVEL L+ S +++ W+G            KYL  L                     
Sbjct: 634 QPDKLVELILQHSNIKKLWKG-----------IKYLPNLR-------------------- 662

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            ++ S   NLI+ P   G              VP       +LE + L GC +L  I  S
Sbjct: 663 ALDLSDSKNLIKVPDFRG--------------VP-------NLEWIILEGCTKLAWIHPS 701

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
              LR L  L L  C NL                         LP++   L  LE L + 
Sbjct: 702 VGLLRKLAFLNLKNCKNL-----------------------VSLPNNILGLSSLEYLNIS 738

Query: 595 DCSKL--DNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
            C K+  + L +N  + EY        +A+    +S ++         S+ +G ++    
Sbjct: 739 GCPKIFSNQLLENPINEEYSMIPNIRETAMQSQSTSSSIIKRFIPFHFSYSRGSKNSGGC 798

Query: 653 FLLGLSAMGLLHISDYA---VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
            L  L +   LH  D +   + +IP  I  + SLE L L GN F SLP+ I ++S+L  +
Sbjct: 799 LLPSLPSFSCLHDLDLSFCNLSQIPDAIGSILSLETLNLGGNKFVSLPSTINKLSKLVHL 858

Query: 710 HLEDFNMLQSLPELP 724
           +LE    L+ LPE+P
Sbjct: 859 NLEHCKQLRYLPEMP 873



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 154/402 (38%), Gaps = 71/402 (17%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           I +L    + LP L  L + D   L  +PD  G     + IL   + ++ +  SV L   
Sbjct: 648 IKKLWKGIKYLPNLRALDLSDSKNLIKVPDFRGVPNLEWIILEGCTKLAWIHPSVGLLRK 707

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHIS------DYAVREIPQEIAYLSSLEILYL 688
           L  L+  +CK L S P   +LGLS++  L+IS         + E P    Y     I   
Sbjct: 708 LAFLNLKNCKNLVSLPNN-ILGLSSLEYLNISGCPKIFSNQLLENPINEEYSMIPNIRET 766

Query: 689 SGNNFESLPAIIKQMSQLRFIHLEDFN-----MLQSLPELPLCLKYLHLIDCKMLQSLPV 743
           +  +  +  +IIK+     F +          +L SLP    CL  L L  C + Q    
Sbjct: 767 AMQSQSTSSSIIKRFIPFHFSYSRGSKNSGGCLLPSLPSFS-CLHDLDLSFCNLSQIPDA 825

Query: 744 LP--FCLESLDLTGCNMLRSLPELPLCLQ---YLNLEDCNMLRSLPELPLCLQLLTVRNC 798
           +     LE+L+L G N   SLP     L    +LNLE C  LR LPE+P    L  +R  
Sbjct: 826 IGSILSLETLNLGG-NKFVSLPSTINKLSKLVHLNLEHCKQLRYLPEMPTPTALPVIRGI 884

Query: 799 NRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNK 858
                    L+                                     NC K+       
Sbjct: 885 YSFAHYGRGLIIF-----------------------------------NCPKIV------ 903

Query: 859 ILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQ 918
                + R R MA + L L       E  + +    I++PG++IP WF+N+  G+SI + 
Sbjct: 904 ----DIERCRGMAFSWL-LQILQVSQESATPIGWIDIIVPGNQIPRWFNNRCVGNSISLD 958

Query: 919 LPPHSSCRNLIGFAFCAVL-----DSKKVDSDCFRYFYVSFQ 955
             P     N IG A C+V+     D   +D+D      + F+
Sbjct: 959 PSPIMLDNNWIGIA-CSVVFVVFDDPTSLDNDWKSSISIGFE 999


>gi|357496097|ref|XP_003618337.1| Resistance protein [Medicago truncatula]
 gi|355493352|gb|AES74555.1| Resistance protein [Medicago truncatula]
          Length = 1205

 Score =  291 bits (746), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 251/745 (33%), Positives = 354/745 (47%), Gaps = 104/745 (13%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTT--LSEKLEVAGPNI 77
            KTTLAK I+++   +F+  CF+ DVR    T  GL HLQ+Q+L  T  L++KL      I
Sbjct: 373  KTTLAKEIYNRIYDQFDKVCFLHDVREICSTKYGLVHLQEQLLFQTVGLNDKLGHVSEGI 432

Query: 78   PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
              F KER+++ K+L++LDDV++  QLK L G+L+ F  GS+++VTTRDK +L  +  E  
Sbjct: 433  -QFIKERLQQKKVLLILDDVDQPDQLKALAGDLNWFCGGSKVIVTTRDKHLLASYGVE-- 489

Query: 138  KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
            K Y VNGL  ++A +       K N               Y+ G PL LEV+GS L  K 
Sbjct: 490  KTYEVNGLNEKDALDLLRWKVCKSNKIGSSYEGILEHASRYSSGLPLALEVVGSDLSGKS 549

Query: 198  KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
            K  W   L    R       +I  ILK+SF+ L    KS+FLDIACFF+G   +    IL
Sbjct: 550  KDEWSSTLARYERTVPK---NIQQILKVSFDALQEEDKSLFLDIACFFKGCRLEEFQDIL 606

Query: 258  DDSES----DVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
            D   +    + + +L++KSL+ I G  + +HD+++EMG++IVRQES KEPGKRSRLW  +
Sbjct: 607  DAHYTYCIKNHIGVLVEKSLIKIIGGCVTLHDLIEEMGKEIVRQESPKEPGKRSRLWSHE 666

Query: 314  EISRVLKHNKGTDAIEGIFLD--LSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
            +I  VL  N GT  IE ++L+  LSK + +         M NLR           I   P
Sbjct: 667  DIVPVLHANSGTRKIEILYLNFSLSKEEEVEWKGDELKKMENLRTII--------IRNCP 718

Query: 372  SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLR------ 425
                     +SK     G  +LP  LR L W  YP     S+F P+ L    LR      
Sbjct: 719  ---------FSK-----GCQHLPNGLRVLDWPKYPSENFTSDFFPRKLSICRLRESSLTT 764

Query: 426  -----CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
                  SKV   +    +CVP+      Y     F    SL  F     F+C   +N  +
Sbjct: 765  FEFPSSSKVGVMFSFSSSCVPT-----HYCKITHFFSSLSLFYFLQK--FLCMRELNLDH 817

Query: 481  CVNLIEFPQISGKVTRLYLGQ---SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF-- 535
              +L +   ISG +    L     S +  + +SI  L  L++L++ GC +L    +SF  
Sbjct: 818  NQSLTQILDISGLLNLEILSFRDCSNLITIHNSIGFLNKLKILNVTGCSKL----SSFPP 873

Query: 536  CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
             KL SL+ L L  C NL+ FPEIL  M+H+  I    T I + P SF+NL  +  L +  
Sbjct: 874  IKLTSLLKLELSHCNNLKSFPEILGDMKHITYIELVGTSIEQFPFSFQNLSMVHTLQIFG 933

Query: 596  CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
              K  NL           +I A  + I   PSS   SN+ + L    C     F R F+ 
Sbjct: 934  SGKPHNLS----------WINARENDI---PSSTVYSNV-QFLHLIECNPSNDFLRRFV- 978

Query: 656  GLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN 715
                                      ++E+L LSG+N   L   +K+   L+ + L D  
Sbjct: 979  --------------------------NVEVLDLSGSNLTVLSKCLKECHFLQRLCLNDCK 1012

Query: 716  MLQSLPELPLCLKYLHLIDCKMLQS 740
             LQ +  +P  LK L  + C  L S
Sbjct: 1013 YLQEITGIPPSLKRLSALQCNSLTS 1037



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 186/453 (41%), Gaps = 40/453 (8%)

Query: 399  YLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ-PWEGEKACVPSSIQNFKYLSALSFKG 457
            + H D  P+    S  +   ++ LN   SK E+  W+G++     +++     +    KG
Sbjct: 663  WSHEDIVPVLHANSGTRKIEILYLNFSLSKEEEVEWKGDELKKMENLRTIIIRNCPFSKG 722

Query: 458  CQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDL 517
            CQ L +    L +    + NF+       FP+    + RL        E PSS +     
Sbjct: 723  CQHLPNGLRVLDWPKYPSENFTSDF----FPR-KLSICRLRESSLTTFEFPSSSKVGVMF 777

Query: 518  EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
                   C     + T +CK+    +      L+L +F   L+K   ++ +  D      
Sbjct: 778  SFSS--SC-----VPTHYCKITHFFS-----SLSLFYF---LQKFLCMRELNLDHNQSLT 822

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLR 636
                   L  LE+L   DCS L  + ++IG L  L  + +   S +S  P  + L+++L+
Sbjct: 823  QILDISGLLNLEILSFRDCSNLITIHNSIGFLNKLKILNVTGCSKLSSFPP-IKLTSLLK 881

Query: 637  SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL 696
             L+ SHC  L+SFP   L  +  +  + +   ++ + P     LS +  L + G+     
Sbjct: 882  -LELSHCNNLKSFPE-ILGDMKHITYIELVGTSIEQFPFSFQNLSMVHTLQIFGSG---- 935

Query: 697  PAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGC 756
                 +   L +I+  + ++  S   +   +++LHLI+C            +E LDL+G 
Sbjct: 936  -----KPHNLSWINARENDIPSST--VYSNVQFLHLIECNPSNDFLRRFVNVEVLDLSGS 988

Query: 757  NMLRSLPELPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL 814
            N+      L  C  LQ L L DC  L+ +  +P  L+ L+   CN L S    +L  Q L
Sbjct: 989  NLTVLSKCLKECHFLQRLCLNDCKYLQEITGIPPSLKRLSALQCNSLTSSCRSMLLSQHL 1048

Query: 815  --DASVLEKLSKHSPDLQWAPESLKSAAICFEF 845
              D      L+  +   +W     +  +I F F
Sbjct: 1049 HEDGGTEFSLAGSARVPEWFDHQSEGPSISFWF 1081


>gi|297840621|ref|XP_002888192.1| hypothetical protein ARALYDRAFT_893604 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334033|gb|EFH64451.1| hypothetical protein ARALYDRAFT_893604 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 760

 Score =  291 bits (746), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 206/596 (34%), Positives = 303/596 (50%), Gaps = 83/596 (13%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            +IVGIWGM GIGKT++A+ IF   + +++   F+ D     +T G L  ++  + S   
Sbjct: 188 AEIVGIWGMAGIGKTSIAREIFGILAPQYDMCYFLQDFDLTCQTKG-LRQMRDDLFSKIF 246

Query: 67  SE-KLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            E KL +   +I   F ++  +   +L+VLDDV+     + ++G    F  G RI++T+R
Sbjct: 247 GEEKLSIGASDIKTSFMRDWFQEKTILLVLDDVSNARDAEAVVGGFCWFSHGHRIILTSR 306

Query: 125 DKRVLEKFRGEEKKIYRVNGL-EFEEAFEHFCNFAFKENHCPEDLNWHS---RSVVSYTK 180
            K+VL + R +E   Y +  L EFE +             C + LN  +     ++S + 
Sbjct: 307 RKQVLVQCRVKEP--YEIQKLCEFESS-----------RLCKQYLNGENVVISELMSCSS 353

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL L VLGSS+  + +S+  + L  L R   ++I D +   + SF  L    K+IFLD
Sbjct: 354 GIPLALNVLGSSVSKQHRSNMKEHLQSLRRNPPTQIQDEF---QKSFGGLDENEKNIFLD 410

Query: 241 IACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
           +ACFF GE+KD V  +LD     +   + D LID+SL+S+  + + M    Q++GR IV 
Sbjct: 411 LACFFTGENKDHVVQLLDACGFLTYLGICD-LIDESLISVVDDKIEMPVPFQDIGRFIVH 469

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
           +E E +P +RSRLWD K+I+ VL  N GT+AIEGIFLD S +    L P  F+ M  LRL
Sbjct: 470 EEGE-DPCERSRLWDSKDIANVLTRNSGTEAIEGIFLDASDL-NYELSPTMFSKMYRLRL 527

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
            K Y          P        +  K+ L  GL  LP +LR LHW+ YPL  LP  F P
Sbjct: 528 LKLYFST-------PG-------NQCKLSLSQGLYTLPDELRLLHWENYPLECLPQKFNP 573

Query: 417 KNLVELNLRCSKVEQPWEGEK----------------------------------AC--- 439
           +NLVE+N+  S +E+ WEG+K                                   C   
Sbjct: 574 ENLVEVNMPYSNMEKLWEGKKNLEKLKRIKLSHSRNLTDVMVLSEALNLEHIDLEGCISL 633

Query: 440 --VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL 497
             V +SI +   L +L+ K C  L+S P+    +    +  S C    E    +  +  L
Sbjct: 634 VDVSTSIPSCGKLVSLNLKDCSQLQSLPAMFGLISLKLLRMSGCSEFEEIQDFAPNLKEL 693

Query: 498 YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           YL  +AI+E+P SIE LT+L  LDL  C RL+++      LRS+V L L GC +L+
Sbjct: 694 YLAGTAIKELPLSIENLTELITLDLENCTRLQKLPNGISNLRSMVELKLSGCTSLD 749



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 8/176 (4%)

Query: 550 LNLEHFP-EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGS 608
           L+ E++P E L +  + + +     P + +   +E    LE L     S   NL D +  
Sbjct: 557 LHWENYPLECLPQKFNPENLVEVNMPYSNMEKLWEGKKNLEKLKRIKLSHSRNLTDVMVL 616

Query: 609 LEYL---YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHI 665
            E L   +  L    ++  + +S+     L SL+   C  L+S P  F  GL ++ LL +
Sbjct: 617 SEALNLEHIDLEGCISLVDVSTSIPSCGKLVSLNLKDCSQLQSLPAMF--GLISLKLLRM 674

Query: 666 SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP 721
           S  +  E  Q+ A   +L+ LYL+G   + LP  I+ +++L  + LE+   LQ LP
Sbjct: 675 SGCSEFEEIQDFA--PNLKELYLAGTAIKELPLSIENLTELITLDLENCTRLQKLP 728


>gi|15238668|ref|NP_197290.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005098|gb|AED92481.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1197

 Score =  291 bits (746), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 217/711 (30%), Positives = 348/711 (48%), Gaps = 85/711 (11%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S +T + +G+ GM GIGKTTLA  ++++++  F     + D+   SE   GL +L  + L
Sbjct: 222 SDETTRTIGVVGMPGIGKTTLATMLYEKWNDRFLRHVLIRDIHEASE-EDGLNYLATKFL 280

Query: 63  STTLS-EKLEVAGPNIPHFT-KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
              L  E   +      H   K+++   K+L++LD+V+   Q+  L+GE +   +GS+I+
Sbjct: 281 QGLLKVENANIESVQAAHEAYKDQLLETKVLVILDNVSNKDQVDALLGERNWIKKGSKIL 340

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHC----PEDLNWH--SRS 174
           +TT DK ++   +      Y V  L  ++A +HF  +AF  N      P   N+   S+ 
Sbjct: 341 ITTSDKSLM--IQSLVNDTYEVPPLSDKDAIKHFIRYAFDGNEGAAPGPGQGNFPKLSKD 398

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNR---------ICESEIHDIYDILKI 225
            V YTKGNPL L++LG  L  K +SHWG  L+ L++         IC+     +  + + 
Sbjct: 399 FVHYTKGNPLALQMLGKELLGKDESHWGLKLNALDQHHNSPPGQSICKM----LQRVWEG 454

Query: 226 SFNKLTPRVKSIFLDIACFFEGEDKDFVASILD-DSESDVLDILIDKSLVSISGNFLNMH 284
           S+  L+ + K   LDIAC F  +D+++VAS+LD D  S++L+ L++K +++I    ++MH
Sbjct: 455 SYKALSQKEKDALLDIAC-FRSQDENYVASLLDSDGPSNILEDLVNKFMINIYAGKVDMH 513

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINL 343
           D L  + +++ R+ +  +   R RLW    I  VL  NKG   I  IFLDLS I +    
Sbjct: 514 DTLYMLSKELGREATATDRKGRHRLWHHHTIIAVLDKNKGGSNIRSIFLDLSDITRKWCF 573

Query: 344 DPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWD 403
              AF  M +LR  K Y           +   +E  S  K+  P GL     ++RYLHW 
Sbjct: 574 YRHAFAMMRDLRYLKIY----------STHCPQECESDIKLNFPEGLLLPLNEVRYLHWL 623

Query: 404 TYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK-------------------------- 437
            +PL+ +P +F P NLV+L L  S++E+ WE  K                          
Sbjct: 624 KFPLKEVPQDFNPGNLVDLKLPYSEIERVWEDNKDAPKLKWVNLNHSKKLNTLAGLGKAQ 683

Query: 438 --------ACVP-----SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNL 484
                    C         ++N K+L  L+ +GC SL+S P  +  +   T+  S C   
Sbjct: 684 NLQELNLEGCTALKEMHVDMENMKFLVFLNLRGCTSLKSLPE-IQLISLKTLILSGCSKF 742

Query: 485 IEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
             F  IS K+  LYL  +AI+E+P  I  L  L +L+++GCK+LKR+  S  +L++L  L
Sbjct: 743 KTFQVISDKLEALYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQLKALEEL 802

Query: 545 ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
           IL GC  L  FPE    M  L+ +  D T I ++P     +  +  L +    K+  LPD
Sbjct: 803 ILSGCSKLNEFPETWGNMSRLEILLLDETAIKDMPK----ILSVRRLCLNKNEKISRLPD 858

Query: 605 NIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
            +     L ++ L     ++ +P    L   L+ L+   C  L++  +  +
Sbjct: 859 LLNKFSQLQWLHLKYCKNLTHVPQ---LPPNLQYLNVHGCSSLKTVAKPLV 906



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 214/520 (41%), Gaps = 87/520 (16%)

Query: 484  LIEFPQI--SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSL 541
            L E PQ    G +  L L  S IE V    +    L+ ++L   K+L  ++    K ++L
Sbjct: 627  LKEVPQDFNPGNLVDLKLPYSEIERVWEDNKDAPKLKWVNLNHSKKLNTLA-GLGKAQNL 685

Query: 542  VTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE-NLPGLEVLFVEDCSKLD 600
              L L GC  L+     +E M+ L  ++ +    T L S  E  L  L+ L +  CSK  
Sbjct: 686  QELNLEGCTALKEMHVDMENMKFL--VFLNLRGCTSLKSLPEIQLISLKTLILSGCSKFK 743

Query: 601  NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAM 660
                    LE LY      +AI +LP  +     L  L+   CK L              
Sbjct: 744  TFQVISDKLEALYL---DGTAIKELPCDIGRLQRLVMLNMKGCKKL-------------- 786

Query: 661  GLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQS 719
                      + +P  +  L +LE L LSG +     P     MS+L  + L D   ++ 
Sbjct: 787  ----------KRLPDSLGQLKALEELILSGCSKLNEFPETWGNMSRLEILLL-DETAIKD 835

Query: 720  LPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM 779
            +P++ L ++ L L   + +  LP              ++L    +L    Q+L+L+ C  
Sbjct: 836  MPKI-LSVRRLCLNKNEKISRLP--------------DLLNKFSQL----QWLHLKYCKN 876

Query: 780  LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSA 839
            L  +P+LP  LQ L V  C+ L+++ + L+C      S+                 +K  
Sbjct: 877  LTHVPQLPPNLQYLNVHGCSSLKTVAKPLVC------SI----------------PMKHV 914

Query: 840  AICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPG 899
               F FTNC +L   A  +I+  +  R  H+  ++L+   E  + E L          PG
Sbjct: 915  NSSFIFTNCNELEQAAKEEIVVYAE-RKCHLLASALKRCDESCVPEILF-----CTSFPG 968

Query: 900  SEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSF---QF 956
             E+P WFS+ + GS +  +LPPH +   L G A C V+  K   S       V F   Q 
Sbjct: 969  CEMPSWFSHDAIGSMVEFELPPHWNHNRLSGIALCVVVSFKNCKSHA--NLIVKFSCEQN 1026

Query: 957  DLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLN 996
            + E  + S T  V         E+ ++SD V +G+  CL+
Sbjct: 1027 NGEGSSSSITWKVGSLIEQDNQEETVESDHVFIGYTNCLD 1066


>gi|357440369|ref|XP_003590462.1| Disease resistance-like protein [Medicago truncatula]
 gi|355479510|gb|AES60713.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1035

 Score =  291 bits (746), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 228/749 (30%), Positives = 365/749 (48%), Gaps = 118/749 (15%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V +VG++G+GG+GK+TLAKAI++  + +FEG CF+ DVR  S T   L+HLQ+++L  
Sbjct: 196 DEVHMVGLYGIGGLGKSTLAKAIYNFIADQFEGLCFLEDVREIS-TPYNLKHLQEKLLLK 254

Query: 65  TLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
           T+   +++ G +      K+R+ R K+L++LDDV+++ QL+ L G LD FG+GS++++TT
Sbjct: 255 TVGLDIKLGGVSEGIAIIKQRLCRKKILLILDDVDKLEQLEALAGGLDWFGRGSKVIITT 314

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           R+K +L     E    + V GL   +A E     AFK N  P   +      VSY  G P
Sbjct: 315 REKHLLTCHGIES--THAVKGLYVTKALELLRWMAFKHNKVPSSYDDVLNRAVSYASGLP 372

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           LV+E++GS+L  K    W   L    +I   +I +I+   K+S++ L    +S+FLDIAC
Sbjct: 373 LVIEIVGSNLFGKSIEEWKGTLDGYEKIPNKKIQEIF---KLSYDALEEDEQSVFLDIAC 429

Query: 244 FFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
            F+G     V  IL       +     +L++KSL+ I+  ++ +HD++++ G++IVR+ES
Sbjct: 430 CFKGYRLTEVEKILHAHYGHCIKHHVGVLVEKSLIEINTQYVTLHDLIEDTGKEIVRKES 489

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGI-NLDPRAFTNMSNLRLFK 358
            KEPG+R+RLW   +I  VL+ N GT  IE I+ +   ++ I + + +AF  MSNL+   
Sbjct: 490 RKEPGERNRLWCHNDIVHVLQKNTGTGNIEMIYWNYPSMEPIIDWNRKAFKKMSNLKTL- 548

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
             + K  +  K P                    YLP  LR L W+ Y  ++L S+F    
Sbjct: 549 --IIKNGQFSKSPK-------------------YLPSTLRVLIWEGYNAKSLSSSF---- 583

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
              LN                     + F+ +  L+   C+ L   P   H       +F
Sbjct: 584 ---LN---------------------KKFENMKVLTLNFCEYLTHIPDVSHLPNLEKFSF 619

Query: 479 SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
           +YC NLI                     + +SI  L  LEVLD  GC +L+  S    +L
Sbjct: 620 AYCDNLIT--------------------IHNSIGYLNKLEVLDAEGCSKLE--SFPPLQL 657

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
             L  L L  C +L+ FPE+L KM +++ I+   T I ELP SF+NL  L  L +     
Sbjct: 658 TCLKELKLSECESLKSFPELLGKMTNIEEIWLRGTSIRELPFSFQNLSELRDLAL----- 712

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
                              + S I +  S++ +   L  + +  C+ L    +  L    
Sbjct: 713 -------------------SKSGILRFSSNIFMMPTLSKIYARGCRLLLPKHKDILSSTV 753

Query: 659 AMGLLH-------ISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
           A  + H       +SD  +R +   +   +++  L LS  N + LP  + +   L+ + L
Sbjct: 754 ASNVEHLILENNNLSDECIRVV---LTLCANVTCLRLSEKNMKILPECLSECHLLKVLRL 810

Query: 712 EDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           +D   L+ +  +P  LK+   + C+ L S
Sbjct: 811 DDCKSLEEIRGIPPNLKWFSAMRCESLTS 839



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 154/349 (44%), Gaps = 68/349 (19%)

Query: 578 LPSSFEN--LPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALSN 633
           L SSF N     ++VL +  C  L ++PD  ++ +LE   +  A    +  + +S+   N
Sbjct: 579 LSSSFLNKKFENMKVLTLNFCEYLTHIPDVSHLPNLEKFSF--AYCDNLITIHNSIGYLN 636

Query: 634 MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSGNN 692
            L  LD+  C  LESFP    L L+ +  L +S+  +++  P+ +  ++++E ++L G +
Sbjct: 637 KLEVLDAEGCSKLESFPP---LQLTCLKELKLSECESLKSFPELLGKMTNIEEIWLRGTS 693

Query: 693 FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL--CLKYLHLIDCKMLQSLPVLPFCLES 750
              LP   + +S+LR + L    +L+    + +   L  ++   C++L     LP   + 
Sbjct: 694 IRELPFSFQNLSELRDLALSKSGILRFSSNIFMMPTLSKIYARGCRLL-----LPKHKDI 748

Query: 751 LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNR-LQSLPE--- 806
           L  T  + +  L      L+  NL D   +R +  L LC  +  +R   + ++ LPE   
Sbjct: 749 LSSTVASNVEHL-----ILENNNLSD-ECIRVV--LTLCANVTCLRLSEKNMKILPECLS 800

Query: 807 ---ILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADS 863
              +L  L+  D   LE++    P+L+W      SA  C   T+  +             
Sbjct: 801 ECHLLKVLRLDDCKSLEEIRGIPPNLKWF-----SAMRCESLTSSCR------------- 842

Query: 864 LLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLP-GSE-IPDWFSNQS 910
                            M +++KL E     I LP G+E IPDWF +Q+
Sbjct: 843 ----------------RMLLSQKLLEAGCIEICLPTGTEGIPDWFQHQN 875


>gi|237769811|dbj|BAH59424.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1373

 Score =  291 bits (746), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 248/809 (30%), Positives = 382/809 (47%), Gaps = 164/809 (20%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ VGIWGM GIGKTTLAKA+FDQ S  F+ SCF+ D   +    G    L++Q+L    
Sbjct: 172 IRCVGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCLLEEQLLPGND 231

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
           +  ++++        ++R+   ++L+VLDDV      +  +   D  G GS I++T+RDK
Sbjct: 232 ATIMKLSS------LRDRLNSKRVLVVLDDVRNALVGESFLEGFDWLGPGSLIIITSRDK 285

Query: 127 RVLEKFRGEEKKIYRVNGLEFEEAFEHF-CNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
           +V         +IY V GL  +EA + F  + + KE+   ++L   S  V++Y  GNPL 
Sbjct: 286 QVF--CLCGINQIYEVQGLNEKEARQLFLLSASIKEDMGEQNLQELSVRVINYANGNPLA 343

Query: 186 LEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
           + V G  L  K+K S        L R        I D  K +++ L+   K+IFLDIACF
Sbjct: 344 INVYGRELKGKKKLSEMETAFLKLKR---RPPFKIVDAFKSTYDTLSDNEKNIFLDIACF 400

Query: 245 FEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F+GE+ ++V  +L+         +D+L+DK LV+IS N + +H + Q++GR+I+  E+  
Sbjct: 401 FQGENVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREIINGET-V 459

Query: 302 EPGKRSRLWDPKEISRVLKHN---------------KGTDAIEGIFLDLSKIKGINLDPR 346
           +  +R RLW+P  I  +L++N               +G++ IEG+FLD S ++  +L P 
Sbjct: 460 QIERRRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDTSNLR-FDLQPS 518

Query: 347 AFTNMSNLRLFKFYV--PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT 404
           AF NM NLRL K Y   P+ + +   P+ S               L  LP +LR LHW+ 
Sbjct: 519 AFKNMLNLRLLKIYCSNPEVHPVINFPTGS---------------LHSLPNELRLLHWEN 563

Query: 405 YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA---------CVPSSIQNF------KY 449
           YPL++LP NF P++LVE+N+  S++++ W G K          C    + +       + 
Sbjct: 564 YPLKSLPQNFDPRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLVDIDDLLKAEN 623

Query: 450 LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPS 509
           L  +  +GC  L++FP+    +    +N S C+ +    +I   + +L+L  + I  +P 
Sbjct: 624 LEVIDLQGCTRLQNFPAAGRLLRLRDVNLSGCIKIKSVLEIPPNIEKLHLQGTGILALP- 682

Query: 510 SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILE--KMEHLKR 567
                                +ST     R LV         L   P + E  K+E L  
Sbjct: 683 ---------------------VSTVKPNHRELVNF-------LTEIPGLSEASKLERL-- 712

Query: 568 IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPS 627
                T + E  SS ++L  L  L ++DCS L +LP N+ +L+                 
Sbjct: 713 -----TSLLESNSSCQDLGKLICLELKDCSCLQSLP-NMANLD----------------- 749

Query: 628 SVALSNMLRSLDSSHCKGLES---FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLE 684
                  L  LD S C  L S   FPR        +  L++   A+RE+PQ      SLE
Sbjct: 750 -------LNVLDLSGCSSLNSIQGFPR-------FLKQLYLGGTAIREVPQ---LPQSLE 792

Query: 685 ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
           IL   G+   SLP     M+ L F                  LK L L  C  L+++   
Sbjct: 793 ILNAHGSCLRSLP----NMANLEF------------------LKVLDLSGCSELETIQGF 830

Query: 745 PFCLESLDLTGCNMLRSLPELPLCLQYLN 773
           P  L+ L   G   LR +P+LPL L+ LN
Sbjct: 831 PRNLKELYFAG-TTLREVPQLPLSLEVLN 858



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)

Query: 220  YDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI 276
            Y++L++S++ L    K +FL IA  F  ED DFVA ++   + DV   L +L D SL+S+
Sbjct: 1086 YEVLRVSYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLADVSLISV 1145

Query: 277  SGNF-LNMHDILQEMGRQIVRQES 299
            S N  + MH + ++MG++I+  +S
Sbjct: 1146 SSNGEIVMHSLQRQMGKEILHGQS 1169



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 128/300 (42%), Gaps = 47/300 (15%)

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAIS 623
           L+ ++ +  P+  LP +F+  P   V      S+L  L     +LE L  I L  +  + 
Sbjct: 556 LRLLHWENYPLKSLPQNFD--PRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLV 613

Query: 624 QLPSSVALSNMLRSLDSSHCKGLESFPRTF-LLGLSAMGLLH-ISDYAVREIPQEIAYLS 681
            +   +   N L  +D   C  L++FP    LL L  + L   I   +V EIP  I    
Sbjct: 614 DIDDLLKAEN-LEVIDLQGCTRLQNFPAAGRLLRLRDVNLSGCIKIKSVLEIPPNI---- 668

Query: 682 SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY------------ 729
             E L+L G    +LP     +S ++  H E  N L  +P L    K             
Sbjct: 669 --EKLHLQGTGILALP-----VSTVKPNHRELVNFLTEIPGLSEASKLERLTSLLESNSS 721

Query: 730 ---------LHLIDCKMLQSLPVLP-FCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM 779
                    L L DC  LQSLP +    L  LDL+GC+ L S+   P  L+ L L     
Sbjct: 722 CQDLGKLICLELKDCSCLQSLPNMANLDLNVLDLSGCSSLNSIQGFPRFLKQLYL-GGTA 780

Query: 780 LRSLPELPLCLQLLTVRNCNRLQSLPEI--LLCLQELDASVLEKLSKHSPDLQWAPESLK 837
           +R +P+LP  L++L     + L+SLP +  L  L+ LD S   +L      +Q  P +LK
Sbjct: 781 IREVPQLPQSLEILNAHG-SCLRSLPNMANLEFLKVLDLSGCSELET----IQGFPRNLK 835


>gi|357500727|ref|XP_003620652.1| Elongation factor Ts [Medicago truncatula]
 gi|355495667|gb|AES76870.1| Elongation factor Ts [Medicago truncatula]
          Length = 2436

 Score =  291 bits (746), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 233/734 (31%), Positives = 355/734 (48%), Gaps = 134/734 (18%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +D  D V+ + I GMGGIGKTTLA  ++ Q SH F  SCF+ DV        G    QKQ
Sbjct: 211 LDLVDGVRAIRICGMGGIGKTTLAMNLYGQISHRFSASCFIDDVSKIYRLYDGPIDAQKQ 270

Query: 61  MLSTTLS-EKLEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +L  TL  E  ++    +     + R+RR K L++ D+V++V QL+++    +  G GSR
Sbjct: 271 ILHQTLGIEHHQICNRYSAIDLIQRRLRREKALLIFDNVDQVEQLEKIGVHRECLGAGSR 330

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFK-ENHCPEDLNWHSRSVVS 177
           I++ +RD+ +L+++  E   +Y+V  L + E+ + FC  AFK E     +    +  +++
Sbjct: 331 IIIISRDEHILKEY--EVDVVYKVQLLNWTESHKLFCRKAFKAEKIIMSNYQNLANKILN 388

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y  G PL ++VLGS L  +  + W   L  L    ES   D+ D+L++SF+ L    K I
Sbjct: 389 YASGLPLAIKVLGSFLFGRNVTEWKSALAKLR---ESPNKDVMDVLQLSFDGLEKTEKQI 445

Query: 238 FLDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FLDIAC F   D ++V +IL+     +D+ + +LIDKSL+SI+G  + MH +L+E+GR+I
Sbjct: 446 FLDIACLFNCLDMEYVKNILNCCGFNADIGIRVLIDKSLISINGQNIEMHSLLKELGRKI 505

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V++ S KEP K SRLW  K++  V   N   + +E I L  ++     +D    + MSNL
Sbjct: 506 VQKTSSKEPRKWSRLWSAKQLYDVKMENMEKN-VEAILLKRNE----EVDVEHLSKMSNL 560

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL                      +      +  G ++L  +LRY+ W  YP + LP++F
Sbjct: 561 RLL---------------------IIKCNWNISGGSNFLSNELRYVDWHEYPFKYLPTSF 599

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
            P  LVEL L CS ++Q W+ +K      ++N + L  +                     
Sbjct: 600 HPNELVELILWCSNIKQLWKNKKY-----LRNLRKLDLMG-------------------- 634

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
           +IN    ++  EFP                           +LE LDL  CK L  +  S
Sbjct: 635 SINLEKIIDFGEFP---------------------------NLEWLDLELCKNLVELDPS 667

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
              LR LV L L GC  L                        EL  S   L  L  L V+
Sbjct: 668 IGLLRKLVYLNLGGCKKL-----------------------VELDPSIGLLRKLVCLNVK 704

Query: 595 DCSKLDNLPDNI---GSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC-KGLESFP 650
           DC  L ++P+NI    SLEYL     +    + LPS    + +L SL S  C +G++   
Sbjct: 705 DCENLVSIPNNIFDLSSLEYLNMNGCSKVFNNSLPSPTRHTYLLPSLHSLDCLRGVD--- 761

Query: 651 RTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIH 710
                         IS   + ++P  I  L  LE L L GNNF +LP+ ++++S+L +++
Sbjct: 762 --------------ISFCNLSQVPDAIEDLHWLERLNLKGNNFVTLPS-LRKLSELVYLN 806

Query: 711 LEDFNMLQSLPELP 724
           LE   +L+SLP+LP
Sbjct: 807 LEHCKLLESLPQLP 820



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 217/697 (31%), Positives = 340/697 (48%), Gaps = 97/697 (13%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +DS D V  +GI GMGGIGKTTLA  ++DQ SH F  +CF+ DV        G    QKQ
Sbjct: 1573 LDSVDGVHAIGICGMGGIGKTTLAMTLYDQISHRFSANCFIDDVSKIYRLCDGPLDAQKQ 1632

Query: 61   MLSTTLSEK-LEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            +L  TL  K  ++    I     + R+ R K L++LD+V++  Q +++    +  G GSR
Sbjct: 1633 ILFQTLDIKHHQICNRYIATDLIRRRLSREKTLVILDNVDQGEQSEKIAVHREWLGAGSR 1692

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENH----CPEDLNWHSRS 174
            I++ +RD+ +L+++  +   +Y+V  L   ++ + FC  AFK         ++L++    
Sbjct: 1693 IIIISRDEHILKEYGVD--VVYKVPLLNRTDSHKLFCQKAFKHEKIIMSSYQNLDFE--- 1747

Query: 175  VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
            ++SY  G PL ++VLGS L  +  + W   L    R+ E   +D+ D+L++SF+ L    
Sbjct: 1748 ILSYANGLPLAIKVLGSFLFGRNVTEWKSALA---RLRERPDNDVMDVLQLSFDGLNHME 1804

Query: 235  KSIFLDIACFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSI-SGNFLNMHDILQEM 290
            K IFLDIACFF  E + +V ++L+     +D+ L +LIDKSL+SI S + + MH +L E+
Sbjct: 1805 KEIFLDIACFFNRESEKYVKNVLNHCGFHADIGLRVLIDKSLISINSDSVIEMHSLLVEL 1864

Query: 291  GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
            GR+IVR+ S KE  K SR+W  K++  V    K    +E I L+   ++ +++     + 
Sbjct: 1865 GRKIVRENSSKEQRKWSRVWSQKQLYNVTME-KMERHVEAIVLNDDDVEEVDV--EQLSK 1921

Query: 351  MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
            MSNLRL          I+  P+             +P+    L   LRY+ W+ YP + L
Sbjct: 1922 MSNLRLLI--------IKWGPN-------------IPSSPSSLSNTLRYVEWNYYPFKYL 1960

Query: 411  PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS--NL 468
            PS+F P +LVEL L  S ++Q W+ +K      + N + L     +  + +  F    NL
Sbjct: 1961 PSSFHPSDLVELILMYSDIKQLWKNKKY-----LPNLRRLDLRHSRNLEKIVDFGEFPNL 2015

Query: 469  HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
             +     +N   C NL+                    E+  SI  L  L  L+L GC  L
Sbjct: 2016 EW-----LNLELCANLV--------------------ELDPSIGLLRKLVYLNLEGCVNL 2050

Query: 529  KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI--TELPSSFENLP 586
              I  +   L SL  L + GC        I+             TP+  T L  S  +L 
Sbjct: 2051 VSIPNNISGLSSLEDLNICGCSKAFSSSSIMLP-----------TPMRNTYLLPSVHSLN 2099

Query: 587  GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
             L  + +  C  L+ +PD+I  L  L  +    +    LPS   LS ++  L+  HCK L
Sbjct: 2100 CLRKVDISFC-HLNQVPDSIECLHSLEKLNLGGNDFVTLPSLRKLSKLVY-LNLEHCKFL 2157

Query: 647  ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSL 683
            +SFP+  L  L+ +G  H      RE   +  +++ L
Sbjct: 2158 KSFPQ--LPSLTTIGRDH------RENKHKFGWITGL 2186



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 157/428 (36%), Gaps = 133/428 (31%)

Query: 525 CKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
           C  +K++  +   LR+L  L L+G +NLE   +                        F  
Sbjct: 611 CSNIKQLWKNKKYLRNLRKLDLMGSINLEKIID------------------------FGE 646

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHC 643
            P LE L +E C  L  L  +IG L  L Y+ L     + +L  S+ L   L  L+   C
Sbjct: 647 FPNLEWLDLELCKNLVELDPSIGLLRKLVYLNLGGCKKLVELDPSIGLLRKLVCLNVKDC 706

Query: 644 KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-----NNFESLPA 698
           + L S                        IP  I  LSSLE L ++G     NN  SLP+
Sbjct: 707 ENLVS------------------------IPNNIFDLSSLEYLNMNGCSKVFNN--SLPS 740

Query: 699 IIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP--FCLESLDLTGC 756
             +    L  +H  D            CL+ + +  C + Q    +     LE L+L G 
Sbjct: 741 PTRHTYLLPSLHSLD------------CLRGVDISFCNLSQVPDAIEDLHWLERLNLKGN 788

Query: 757 NM-----LRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCL 811
           N      LR L EL     YLNLE C +L SLP+LP    +   R+ N            
Sbjct: 789 NFVTLPSLRKLSELV----YLNLEHCKLLESLPQLPSPTTIGRERDEN------------ 832

Query: 812 QELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMA 871
                           D  W      S  + F   NC KL  +           R   M 
Sbjct: 833 ----------------DDDWI-----SGLVIF---NCSKLGERE----------RCSSMT 858

Query: 872 IASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP--HSSCRNLI 929
             S  + + +A  +  S+     IV+PGSEIP W +NQ  G SI I L P  H +     
Sbjct: 859 F-SWMIQFILANPQSTSQ-----IVIPGSEIPSWINNQCVGDSIQIDLSPAMHDNNNQSH 912

Query: 930 GFAFCAVL 937
            F  CAV 
Sbjct: 913 YFVCCAVF 920



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 15/157 (9%)

Query: 582  FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDS 640
            F   P LE L +E C+ L  L  +IG L  L Y+ L     +  +P++++  + L  L+ 
Sbjct: 2009 FGEFPNLEWLNLELCANLVELDPSIGLLRKLVYLNLEGCVNLVSIPNNISGLSSLEDLNI 2068

Query: 641  SHC-KGLES--------FPRTFLL----GLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
              C K   S           T+LL     L+ +  + IS   + ++P  I  L SLE L 
Sbjct: 2069 CGCSKAFSSSSIMLPTPMRNTYLLPSVHSLNCLRKVDISFCHLNQVPDSIECLHSLEKLN 2128

Query: 688  LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
            L GN+F +LP+ ++++S+L +++LE    L+S P+LP
Sbjct: 2129 LGGNDFVTLPS-LRKLSKLVYLNLEHCKFLKSFPQLP 2164



 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 110/278 (39%), Gaps = 61/278 (21%)

Query: 537  KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
            K+ +L  LI+    N+   P  L     L+ +  +  P   LPSSF              
Sbjct: 1921 KMSNLRLLIIKWGPNIPSSPSSLSNT--LRYVEWNYYPFKYLPSSFH------------- 1965

Query: 597  SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES------FP 650
                  P ++  L  +Y      S I QL  +      LR LD  H + LE       FP
Sbjct: 1966 ------PSDLVELILMY------SDIKQLWKNKKYLPNLRRLDLRHSRNLEKIVDFGEFP 2013

Query: 651  RTFLLGLS----------AMGLLHISDYAVRE-------IPQEIAYLSSLEILYLSGNNF 693
                L L           ++GLL    Y   E       IP  I+ LSSLE L + G + 
Sbjct: 2014 NLEWLNLELCANLVELDPSIGLLRKLVYLNLEGCVNLVSIPNNISGLSSLEDLNICGCSK 2073

Query: 694  ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDL 753
                + I   + +R  +L     L S+  L  CL+ + +  C + Q +P    CL SL+ 
Sbjct: 2074 AFSSSSIMLPTPMRNTYL-----LPSVHSLN-CLRKVDISFCHLNQ-VPDSIECLHSLEK 2126

Query: 754  T--GCNMLRSLPELPLC--LQYLNLEDCNMLRSLPELP 787
               G N   +LP L     L YLNLE C  L+S P+LP
Sbjct: 2127 LNLGGNDFVTLPSLRKLSKLVYLNLEHCKFLKSFPQLP 2164


>gi|15238107|ref|NP_198970.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10178009|dbj|BAB11461.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007308|gb|AED94691.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1085

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 205/647 (31%), Positives = 316/647 (48%), Gaps = 96/647 (14%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH--LQKQML 62
           D V+++GIWG  GIGK+T+A+A+++Q S  F+  CF+ +++G+ ++  G++H   QK + 
Sbjct: 205 DDVKMIGIWGPAGIGKSTIARALYNQLSSSFQLKCFMGNLKGSLKSIVGVDHYEFQKSLQ 264

Query: 63  STTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
              L++ L      + +    KE ++  ++LI+LDDV+++ QL+ L  EL  FG GSRI+
Sbjct: 265 KLLLAKILNQGDMRVHNLAAIKEWLQDQRVLIILDDVDDLEQLEVLAKELSWFGSGSRII 324

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           V T DK++L++    +  IY V+    EEA E  C  AFK++  P+     ++ VV    
Sbjct: 325 VATEDKKILKEHGIND--IYHVDFPSMEEALEILCLSAFKQSSVPDGFEELAKKVVHLCG 382

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
             PL L ++GSSL  + K  W      L RI  S    I  ILK+ + +L+ + +S+FL 
Sbjct: 383 NLPLGLSIVGSSLRGESKHEWEL---QLPRIEASLDGKIESILKVGYERLSKKNQSLFLH 439

Query: 241 IACFFEGEDKDFVASILDDSESDV---LDILIDKSLV--SISGNFLNMHDILQEMGRQIV 295
           IACFF     D+V  +L DS  DV   L  L DK  V  SI+G  +  H +LQ++GRQIV
Sbjct: 440 IACFFNYRSVDYVTVMLADSNLDVRNGLKTLADKCFVHISINGWIVMHHHLLQQLGRQIV 499

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
            ++S+ EPGKR  L + +EI  VL    GT ++ GI  + S I  +++   AF  M NLR
Sbjct: 500 LEQSD-EPGKRQFLIEAEEIRAVLTDETGTGSVIGISYNTSNIGEVSVSKGAFEGMRNLR 558

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
             + +   F                   +Q+P  ++YLP  LR LHWD YP ++LP+ F+
Sbjct: 559 FLRIFNYLFS--------------GKCTLQIPEDMEYLP-PLRLLHWDRYPRKSLPTKFQ 603

Query: 416 PKNLVELNLRCSKVEQPWEGEKAC------------------------------------ 439
           P+ L+EL++  S +E+ W G +                                      
Sbjct: 604 PERLLELHMPHSNLEKLWGGIQPLPNIKSIDLSFSIRLKEIPNLSNATNLETLNLTHCKT 663

Query: 440 ---VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR 496
              +PSSI N   L  L   GC+ LR  P+N++      +  +YC  L  FP IS  +  
Sbjct: 664 LVELPSSISNLHKLKKLKMSGCEKLRVIPTNINLASLEVVRMNYCSRLRRFPDISSNIKT 723

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
           L +G + IE  P S+               RL R+      L+ L            H P
Sbjct: 724 LSVGNTKIENFPPSVAG----------SWSRLARLEIGSRSLKILT-----------HAP 762

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLP 603
           + +  +          + I  +P    +LP L  L VE+C KL  +P
Sbjct: 763 QSIISLN------LSNSDIRRIPDCVISLPYLVELIVENCRKLVTIP 803



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 88/396 (22%), Positives = 156/396 (39%), Gaps = 112/396 (28%)

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFEN----------------------LPGLEVL 591
             PE +E +  L+ ++ DR P   LP+ F+                       LP ++ +
Sbjct: 574 QIPEDMEYLPPLRLLHWDRYPRKSLPTKFQPERLLELHMPHSNLEKLWGGIQPLPNIKSI 633

Query: 592 FVEDCSKLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            +    +L  +P+  N  +LE L   L     + +LPSS++  + L+ L  S C+ L   
Sbjct: 634 DLSFSIRLKEIPNLSNATNLETLN--LTHCKTLVELPSSISNLHKLKKLKMSGCEKLRVI 691

Query: 650 PRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
           P    + L+++ ++ ++  + +R  P      S+++ L +     E+ P  +   S  R 
Sbjct: 692 PTN--INLASLEVVRMNYCSRLRRFPD---ISSNIKTLSVGNTKIENFPPSVAG-SWSRL 745

Query: 709 IHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC 768
             LE                    I  + L+ L   P  + SL+L+  + +R +P+  + 
Sbjct: 746 ARLE--------------------IGSRSLKILTHAPQSIISLNLSNSD-IRRIPDCVIS 784

Query: 769 LQYLN---LEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKH 825
           L YL    +E+C  L ++P LP  L+ L    C  L+      +C    + ++L      
Sbjct: 785 LPYLVELIVENCRKLVTIPALPPWLESLNANKCASLKR-----VCCSFGNPTIL------ 833

Query: 826 SPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINE 885
                              F NCLKL+ +A   I+                   +  ++E
Sbjct: 834 ------------------TFYNCLKLDEEARRGII------------------MQQPVDE 857

Query: 886 KLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
                    I LPG EIP  FS+++ G+SI I L P
Sbjct: 858 --------YICLPGKEIPAEFSHKAVGNSITIPLAP 885


>gi|237770135|gb|ACR19031.1| TIR-NBS-LRR-type disease resistance-like protein [Pyrus x
           bretschneideri]
          Length = 1053

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 221/655 (33%), Positives = 333/655 (50%), Gaps = 77/655 (11%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+ VGIWGMGG+GKTT A AI+D+  H F+  C++ DV  ++E   GL HLQ+Q++S+ L
Sbjct: 222 VKRVGIWGMGGLGKTTAANAIYDKIHHGFQFKCYLGDV-SDTERRCGLVHLQEQLVSSIL 280

Query: 67  --SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
             + ++   G  I    KER+RR K+LIV+D+V++V QL+ + G+ + FG GS I++TTR
Sbjct: 281 KRTTRINSVGEGIS-VIKERLRRRKVLIVVDNVDKVEQLRAIAGDREWFGPGSIIIITTR 339

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVSYTKGNP 183
           D+ +L + R   +  Y    +  EEA E F    F EN+CP E+    S+ VVSY  G P
Sbjct: 340 DEHLLNQVRVNLR--YPAGEMNEEEALELFSWHTF-ENNCPKEEYLELSKKVVSYCGGLP 396

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L L+VLGSSL  +  + W   L  L RI E EI    + LKISF+ L    K+IFL I C
Sbjct: 397 LALKVLGSSLFGRPITEWQSYLEKLKRIPEGEI---IEKLKISFDGLDYNQKTIFLHIFC 453

Query: 244 FFEGEDKDFVASILDDSE-SDVLDILI--DKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
            F G  KD V  ILD+ +    +DI +  ++ L+++    L MHD++QEMG+ I+ ++S 
Sbjct: 454 CFLGMRKDHVTKILDECDLHATIDICVLRERCLITVEWGVLKMHDLIQEMGKTIISEKSP 513

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL-SKIKGINLDPRAFTNMSNLRLFKF 359
            +PG+ SR W+ + I+ VL +  GT+ IE + L L S  K  +   +AF NM  L   + 
Sbjct: 514 TQPGRWSRPWNLEAITDVLTNKSGTEEIEALSLHLPSSEKKASFRTKAFVNMKKLGFLR- 572

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF--KPK 417
                              LSY  V+L     + PK+LR+L W  +P + +P +   +PK
Sbjct: 573 -------------------LSY--VELAGSFKHFPKELRWLCWHGFPFKYMPEHLLNQPK 611

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
            LV L+L  S + + W+  K      ++N K    L F   + L+  P          +N
Sbjct: 612 -LVALDLSFSNLRKGWKNSKP-----LENLK---ILDFSHSEKLKKSPDFSRLPNLEELN 662

Query: 478 FSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
           FS C                     ++ ++  SI  L  L  ++   C +L+ +   F K
Sbjct: 663 FSSC--------------------DSLSKIHPSIGQLKKLTWVNFDRCYKLRYLPAEFYK 702

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE--D 595
           L+S+  L L+ C +L   PE L  M  L+++ +D+  I + P+    L  L VL V   D
Sbjct: 703 LKSVKNLSLMDC-SLRELPEGLGDMVSLRKLDADQIAIKQFPNDLGRLISLRVLTVGSYD 761

Query: 596 CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           C    NLP  IG    +   +     +  +P    L   L    +  C  LE+ P
Sbjct: 762 CC---NLPSLIGLSNLVTLTVYRCRCLRAIPD---LPTNLEDFIAFRCLALETMP 810



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 108/482 (22%), Positives = 184/482 (38%), Gaps = 111/482 (23%)

Query: 488 PQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL 547
           P   G+ +R +    AI +V ++     ++E L L      K+ S    + ++ V +  L
Sbjct: 513 PTQPGRWSRPW-NLEAITDVLTNKSGTEEIEALSLHLPSSEKKASF---RTKAFVNMKKL 568

Query: 548 GCLNL---------EHFPEILEKM-----------EHL---KRIYSDRTPITELPSSFEN 584
           G L L         +HFP+ L  +           EHL    ++ +     + L   ++N
Sbjct: 569 GFLRLSYVELAGSFKHFPKELRWLCWHGFPFKYMPEHLLNQPKLVALDLSFSNLRKGWKN 628

Query: 585 LPGLEVLFVEDCS---KLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
              LE L + D S   KL   PD   + +LE L +  ++  ++S++  S+     L  ++
Sbjct: 629 SKPLENLKILDFSHSEKLKKSPDFSRLPNLEELNF--SSCDSLSKIHPSIGQLKKLTWVN 686

Query: 640 SSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAI 699
              C  L   P  F   L ++  L + D ++RE+P+ +  + SL  L       +  P  
Sbjct: 687 FDRCYKLRYLPAEFY-KLKSVKNLSLMDCSLRELPEGLGDMVSLRKLDADQIAIKQFPND 745

Query: 700 IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNML 759
           + ++  LR + +  +                   DC  L SL  L   L +L +  C  L
Sbjct: 746 LGRLISLRVLTVGSY-------------------DCCNLPSLIGLS-NLVTLTVYRCRCL 785

Query: 760 RSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVL 819
           R++P+LP      NLED    R       CL L T+ + ++L ++ ++LLC         
Sbjct: 786 RAIPDLP-----TNLEDFIAFR-------CLALETMPDFSQLLNMRQLLLCF-------- 825

Query: 820 EKLSKHSPDLQWAP-----ESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIAS 874
                 SP +   P     +SL S  +      C  L  +    IL             S
Sbjct: 826 ------SPKVTEVPGLGLGKSLNS-MVDLSMNWCTNLTAEFRKNIL---------QGWTS 869

Query: 875 LRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFC 934
             +G        L ++ G         IP+WF   + G+ +   + P    RN  G   C
Sbjct: 870 CGVG-----GISLDKIHG---------IPEWFDFVADGNKVSFDV-PQCDGRNFKGLTLC 914

Query: 935 AV 936
            V
Sbjct: 915 WV 916


>gi|357499339|ref|XP_003619958.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494973|gb|AES76176.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1109

 Score =  291 bits (744), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 246/768 (32%), Positives = 366/768 (47%), Gaps = 118/768 (15%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D   ++GI G GG+GKTTL +A+++  + +F+G CF+  VR NS    GLEHLQKQ+LS 
Sbjct: 220 DGACMIGICGSGGLGKTTLTRALYNLIADQFDGLCFLHSVRENS-IKYGLEHLQKQLLSK 278

Query: 65  TLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
           TL E+         IP   K+R+ + K+L++LDDV++  QLK L+GE    G GSR+++T
Sbjct: 279 TLGEEFNFGHVSEGIP-IIKDRLHQKKVLLILDDVDKPKQLKVLVGEPGWLGPGSRVIIT 337

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TRD+ +L        +IY ++GL  +EA E F   AFK N      ++     V YT G 
Sbjct: 338 TRDRHLLSCHG--ITRIYDLDGLNDKEALELFIKMAFKSNIIDSSYDYILNRAVKYTSGL 395

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL +EV+GS+L  K    W   L    R   +   DI +I K+SF+ L    KS+FLDI 
Sbjct: 396 PLAIEVVGSNLFGKSIEEWESTLDKYER---TPPEDIQNIFKVSFDALDKEEKSVFLDIV 452

Query: 243 CFFEGEDKDFVASILDDSES----DVLDILIDKSLVSI----------SGNFLNMHDILQ 288
           C F+G    +V  IL           + +L++KSL+            +   + +HD+++
Sbjct: 453 CCFKGCPLAYVEKILHFHYGYCIKSHIGVLVEKSLIKTYIEYDWRRRPTNVIVTLHDLIE 512

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL-SKIKGINLDPRA 347
             G++IV+QES +EPG+RSRLW   +I  VLK N GT  IE I+L+  +K   I+ + +A
Sbjct: 513 HTGKEIVQQESPEEPGERSRLWCQDDIVHVLKENIGTSKIEMIYLNFPTKNSEIDWNGKA 572

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F  M+ L+                       L     Q   G  +LP  LR L W+ YP 
Sbjct: 573 FKKMTKLK----------------------TLIIENGQFSKGPKHLPSTLRVLKWNRYPS 610

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSN 467
            ++ S+   K   ++ +                   I N +YL+ +S        SF  N
Sbjct: 611 ESMSSSVFNKTFEKMKIL-----------------KIDNCEYLTNISDV------SFLPN 647

Query: 468 LHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKR 527
           L       I+F  C +L+                     +  SI  L+ L++L+   C +
Sbjct: 648 LE-----KISFKNCKSLVR--------------------IHDSIGFLSQLQILNAADCNK 682

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
           L  +S    KL+SL  L L GC +L+ FPEIL KME++K+I   +T I ELP SF NL G
Sbjct: 683 L--LSFPPLKLKSLRKLKLSGCTSLKKFPEILGKMENIKKIILRKTGIEELPFSFNNLIG 740

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
           L  L +E C KL +LP +I  +  L  +           S    S +L   + +    L 
Sbjct: 741 LTDLTIEGCGKL-SLPSSILMMLNLLEV-----------SIFGYSQLLPKQNDNLSSTLS 788

Query: 648 SFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
           S      L  S    L I+          + + S++E LYLSG+  + LP  +K    ++
Sbjct: 789 SNVNVLRLNASNHEFLTIA----------LMWFSNVETLYLSGSTIKILPESLKNCLSIK 838

Query: 708 FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTG 755
            I L+    L+ +  +P  L  L  + CK L S        + L L G
Sbjct: 839 CIDLDGCETLEEIKGIPPNLITLSALRCKSLTSSSKSMLISQELHLAG 886



 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 105/280 (37%), Gaps = 54/280 (19%)

Query: 509 SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI 568
           S +  L +LE +  + CK L RI  S   L  L  L    C  L  FP            
Sbjct: 640 SDVSFLPNLEKISFKNCKSLVRIHDSIGFLSQLQILNAADCNKLLSFP------------ 687

Query: 569 YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSS 628
                P+         L G        C+ L   P+ +G +E +  I+   + I +LP S
Sbjct: 688 -----PLKLKSLRKLKLSG--------CTSLKKFPEILGKMENIKKIILRKTGIEELPFS 734

Query: 629 VALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI-PQEIAYLSS----- 682
                 L  L    C  L S P + L+ L+   LL +S +   ++ P++   LSS     
Sbjct: 735 FNNLIGLTDLTIEGCGKL-SLPSSILMMLN---LLEVSIFGYSQLLPKQNDNLSSTLSSN 790

Query: 683 LEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
           + +L L+ +N E L   +   S +  ++L       ++  LP  LK    I C       
Sbjct: 791 VNVLRLNASNHEFLTIALMWFSNVETLYLSG----STIKILPESLKNCLSIKC------- 839

Query: 743 VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRS 782
                   +DL GC  L  +  +P  L  L+   C  L S
Sbjct: 840 --------IDLDGCETLEEIKGIPPNLITLSALRCKSLTS 871


>gi|224109502|ref|XP_002333244.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222835789|gb|EEE74224.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1060

 Score =  291 bits (744), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 267/836 (31%), Positives = 401/836 (47%), Gaps = 149/836 (17%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            M+S D V IVGIWGMGGIGKTT+A+ +  +    FE   F ++ R  S+       L++ 
Sbjct: 233  MESLD-VLIVGIWGMGGIGKTTIAEVVCSKVRSRFE-RIFFANFRQQSD-------LRRS 283

Query: 61   MLSTTLS-EKLEVAGP--NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQ----F 113
             LS  L  E L+  G       F ++R+RR++ LIVLD+V+ +  L+     LD+    F
Sbjct: 284  FLSWLLGQETLDTMGSLSFRDSFVRDRLRRIRGLIVLDNVDNLMHLEEWRDLLDERNSSF 343

Query: 114  GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH-S 172
            G GS++++T+RDK+VL     E    Y+V GL  E+A + F + A K N  P   + H  
Sbjct: 344  GPGSKVLITSRDKQVLSNVVDE---TYKVQGLTDEQAIQLFSSKALK-NCIPTSDHRHLI 399

Query: 173  RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
              +  + +GNPL L+VLGSSL  K    W   L+ L     ++   I   L+IS++ L  
Sbjct: 400  EQIGRHVQGNPLALKVLGSSLYGKSIEEWRSALNKL-----AQHPQIERALRISYDGLDS 454

Query: 233  RVKSIFLDIACFFEGE--DKDFVASILDD--SESDVLDI--LIDKSLVSISGNFLNMHDI 286
              KSIFLDIA F      +K     ILD     S + DI  LIDK L++ S + L MHD+
Sbjct: 455  EQKSIFLDIAHFLTRSRWEKSRAIRILDVFYGRSVIFDINTLIDKCLINTSPSSLEMHDL 514

Query: 287  LQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLD-LSKIKGINLDP 345
            L+EM   IVR ES+  PG+RSRL  P+++ +VL+ NKGT  I+GI +D LS+   I+L  
Sbjct: 515  LREMAFNIVRAESDF-PGERSRLCHPRDVVQVLEENKGTQQIKGISVDGLSR--HIHLKS 571

Query: 346  RAFTNMSNLRLFKF--YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWD 403
             AF  M  LR   F   V K +    LP               P GL+YLP KLRYL W+
Sbjct: 572  DAFAMMDGLRFLDFDHVVDKMH----LP---------------PTGLEYLPNKLRYLQWN 612

Query: 404  TYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKAC------------------------ 439
             +P ++LP +F  ++LVEL+LR SK+ + W G K                          
Sbjct: 613  GFPSKSLPPSFCAEHLVELDLRKSKLVKLWTGVKDVGNLRRIDLSDSPYLTELPDLSMAK 672

Query: 440  ---------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNL 484
                           VPSS+Q    L  +    C +LRSFP  L+      +  + C+++
Sbjct: 673  NLVSLILVDCPSLTEVPSSLQYLDKLEKIDLYRCYNLRSFPM-LYSKVLRYLEINRCLDV 731

Query: 485  IEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL---------------- 528
               P IS  +  L L Q++I+EVP S+   + LE+LDL GC ++                
Sbjct: 732  TTCPTISQNMELLILEQTSIKEVPQSVA--SKLELLDLSGCSKMTKFPENLEDIEDLDLS 789

Query: 529  ----KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP-SSFE 583
                K + +S   L SL +L + GC  LE F EI   M+ L+ +   ++ I E+P  SF+
Sbjct: 790  GTAIKEVPSSIQFLTSLCSLDMNGCSKLESFSEITVPMKSLQHLNLSKSGIKEIPLISFK 849

Query: 584  NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLP----------------- 626
            ++  L  L++ D + +  LP +I  +  L ++    + I  LP                 
Sbjct: 850  HMISLTFLYL-DGTPIKELPLSIKDMVCLQHLSLTGTPIKALPELPPSLRKITTHDCASL 908

Query: 627  ----SSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLL--HISDYAVREIPQEIAYL 680
                S + +S++   LD ++C  L+  P    + L    +L     DY V+    E  + 
Sbjct: 909  ETVTSIINISSLWHGLDFTNCFKLDQKPLVAAMHLKIQDMLCEVYCDYHVKSKNGE--HD 966

Query: 681  SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP---LCLKYLHLI 733
               E++  SGN ++    + K  S    +   +FN++  L E     +  K+ H I
Sbjct: 967  GDDEVVLASGNKYDLTFNLKKWDSDHMVLDYSNFNLVNRLREYSGNEVTFKFYHSI 1022



 Score = 47.0 bits (110), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 29/218 (13%)

Query: 628 SVALSNMLRSLDSSHCKGLESFPRTFLLGL-SAMGLLHISDYAVREIPQEIAYLSSLEIL 686
           + A+ + LR LD  H       P T L  L + +  L  + +  + +P        +E L
Sbjct: 573 AFAMMDGLRFLDFDHVVDKMHLPPTGLEYLPNKLRYLQWNGFPSKSLPPSFCAEHLVE-L 631

Query: 687 YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC--LKYLHLIDCKMLQSLPV- 743
            L  +    L   +K +  LR I L D   L  LP+L +   L  L L+DC  L  +P  
Sbjct: 632 DLRKSKLVKLWTGVKDVGNLRRIDLSDSPYLTELPDLSMAKNLVSLILVDCPSLTEVPSS 691

Query: 744 LPFC--LESLDLTGCNMLRSLPEL-PLCLQYLNLEDC-----------NM------LRSL 783
           L +   LE +DL  C  LRS P L    L+YL +  C           NM        S+
Sbjct: 692 LQYLDKLEKIDLYRCYNLRSFPMLYSKVLRYLEINRCLDVTTCPTISQNMELLILEQTSI 751

Query: 784 PELPLC----LQLLTVRNCNRLQSLPEILLCLQELDAS 817
            E+P      L+LL +  C+++   PE L  +++LD S
Sbjct: 752 KEVPQSVASKLELLDLSGCSKMTKFPENLEDIEDLDLS 789


>gi|10177889|dbj|BAB11221.1| disease resistance protein [Arabidopsis thaliana]
          Length = 1188

 Score =  291 bits (744), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 217/711 (30%), Positives = 348/711 (48%), Gaps = 85/711 (11%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S +T + +G+ GM GIGKTTLA  ++++++  F     + D+   SE   GL +L  + L
Sbjct: 225 SDETTRTIGVVGMPGIGKTTLATMLYEKWNDRFLRHVLIRDIHEASE-EDGLNYLATKFL 283

Query: 63  STTLS-EKLEVAGPNIPHFT-KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
              L  E   +      H   K+++   K+L++LD+V+   Q+  L+GE +   +GS+I+
Sbjct: 284 QGLLKVENANIESVQAAHEAYKDQLLETKVLVILDNVSNKDQVDALLGERNWIKKGSKIL 343

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHC----PEDLNWH--SRS 174
           +TT DK ++   +      Y V  L  ++A +HF  +AF  N      P   N+   S+ 
Sbjct: 344 ITTSDKSLM--IQSLVNDTYEVPPLSDKDAIKHFIRYAFDGNEGAAPGPGQGNFPKLSKD 401

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNR---------ICESEIHDIYDILKI 225
            V YTKGNPL L++LG  L  K +SHWG  L+ L++         IC+     +  + + 
Sbjct: 402 FVHYTKGNPLALQMLGKELLGKDESHWGLKLNALDQHHNSPPGQSICKM----LQRVWEG 457

Query: 226 SFNKLTPRVKSIFLDIACFFEGEDKDFVASILD-DSESDVLDILIDKSLVSISGNFLNMH 284
           S+  L+ + K   LDIAC F  +D+++VAS+LD D  S++L+ L++K +++I    ++MH
Sbjct: 458 SYKALSQKEKDALLDIAC-FRSQDENYVASLLDSDGPSNILEDLVNKFMINIYAGKVDMH 516

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINL 343
           D L  + +++ R+ +  +   R RLW    I  VL  NKG   I  IFLDLS I +    
Sbjct: 517 DTLYMLSKELGREATATDRKGRHRLWHHHTIIAVLDKNKGGSNIRSIFLDLSDITRKWCF 576

Query: 344 DPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWD 403
              AF  M +LR  K Y           +   +E  S  K+  P GL     ++RYLHW 
Sbjct: 577 YRHAFAMMRDLRYLKIY----------STHCPQECESDIKLNFPEGLLLPLNEVRYLHWL 626

Query: 404 TYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK-------------------------- 437
            +PL+ +P +F P NLV+L L  S++E+ WE  K                          
Sbjct: 627 KFPLKEVPQDFNPGNLVDLKLPYSEIERVWEDNKDAPKLKWVNLNHSKKLNTLAGLGKAQ 686

Query: 438 --------ACVP-----SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNL 484
                    C         ++N K+L  L+ +GC SL+S P  +  +   T+  S C   
Sbjct: 687 NLQELNLEGCTALKEMHVDMENMKFLVFLNLRGCTSLKSLPE-IQLISLKTLILSGCSKF 745

Query: 485 IEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
             F  IS K+  LYL  +AI+E+P  I  L  L +L+++GCK+LKR+  S  +L++L  L
Sbjct: 746 KTFQVISDKLEALYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQLKALEEL 805

Query: 545 ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
           IL GC  L  FPE    M  L+ +  D T I ++P     +  +  L +    K+  LPD
Sbjct: 806 ILSGCSKLNEFPETWGNMSRLEILLLDETAIKDMPK----ILSVRRLCLNKNEKISRLPD 861

Query: 605 NIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
            +     L ++ L     ++ +P    L   L+ L+   C  L++  +  +
Sbjct: 862 LLNKFSQLQWLHLKYCKNLTHVPQ---LPPNLQYLNVHGCSSLKTVAKPLV 909



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 214/520 (41%), Gaps = 87/520 (16%)

Query: 484  LIEFPQI--SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSL 541
            L E PQ    G +  L L  S IE V    +    L+ ++L   K+L  ++    K ++L
Sbjct: 630  LKEVPQDFNPGNLVDLKLPYSEIERVWEDNKDAPKLKWVNLNHSKKLNTLA-GLGKAQNL 688

Query: 542  VTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE-NLPGLEVLFVEDCSKLD 600
              L L GC  L+     +E M+ L  ++ +    T L S  E  L  L+ L +  CSK  
Sbjct: 689  QELNLEGCTALKEMHVDMENMKFL--VFLNLRGCTSLKSLPEIQLISLKTLILSGCSKFK 746

Query: 601  NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAM 660
                    LE LY      +AI +LP  +     L  L+   CK L              
Sbjct: 747  TFQVISDKLEALYL---DGTAIKELPCDIGRLQRLVMLNMKGCKKL-------------- 789

Query: 661  GLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQS 719
                      + +P  +  L +LE L LSG +     P     MS+L  + L D   ++ 
Sbjct: 790  ----------KRLPDSLGQLKALEELILSGCSKLNEFPETWGNMSRLEILLL-DETAIKD 838

Query: 720  LPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM 779
            +P++ L ++ L L   + +  LP              ++L    +L    Q+L+L+ C  
Sbjct: 839  MPKI-LSVRRLCLNKNEKISRLP--------------DLLNKFSQL----QWLHLKYCKN 879

Query: 780  LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSA 839
            L  +P+LP  LQ L V  C+ L+++ + L+C      S+                 +K  
Sbjct: 880  LTHVPQLPPNLQYLNVHGCSSLKTVAKPLVC------SI----------------PMKHV 917

Query: 840  AICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPG 899
               F FTNC +L   A  +I+  +  R  H+  ++L+   E  + E L          PG
Sbjct: 918  NSSFIFTNCNELEQAAKEEIVVYAE-RKCHLLASALKRCDESCVPEILF-----CTSFPG 971

Query: 900  SEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSF---QF 956
             E+P WFS+ + GS +  +LPPH +   L G A C V+  K   S       V F   Q 
Sbjct: 972  CEMPSWFSHDAIGSMVEFELPPHWNHNRLSGIALCVVVSFKNCKSHA--NLIVKFSCEQN 1029

Query: 957  DLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLN 996
            + E  + S T  V         E+ ++SD V +G+  CL+
Sbjct: 1030 NGEGSSSSITWKVGSLIEQDNQEETVESDHVFIGYTNCLD 1069


>gi|357513279|ref|XP_003626928.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355520950|gb|AET01404.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1087

 Score =  291 bits (744), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 212/584 (36%), Positives = 309/584 (52%), Gaps = 65/584 (11%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V +VGIWGMGGIGK+T+AK I++   +EFE   FV+++R   E   G   LQ+Q+LS  L
Sbjct: 202 VCLVGIWGMGGIGKSTIAKVIYNDLCYEFEDQSFVANIREVWEKDRGRIDLQEQLLSDIL 261

Query: 67  -SEKLEV-AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            + K++V +        K+R+R  ++L VLDDV+E+ Q   L  E +  G GS I++TTR
Sbjct: 262 KTRKIKVLSVEQGKAMIKQRLRSKRILAVLDDVSELEQFNALC-EGNSVGPGSVIIITTR 320

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           D RVL     E   IY   GL   E+ E FC  AF++    ED    SR VV+Y  G PL
Sbjct: 321 DLRVLNIL--EVDFIYEAEGLNASESLELFCGHAFRKVIPTEDFLILSRYVVAYCGGIPL 378

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFLDIAC 243
            LEVLGS L  +RK  W  VL  L +I   +IH+    LKISFN L+ R+ K IFLD+ C
Sbjct: 379 ALEVLGSYLLKRRKQEWQSVLSKLEKIPNDQIHEK---LKISFNGLSDRMEKDIFLDVCC 435

Query: 244 FFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQES 299
           FF G+D+ +V  IL+     +D+ + +LI++SL+ +  N  L MHD+L++MGR+IVR+ S
Sbjct: 436 FFIGKDRAYVTKILNGCGLHADIGITVLIERSLIKVEKNKKLGMHDLLRDMGREIVRESS 495

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
            +EP KR+RLW  +++  VL+ + GT AIEG+ + L K   +  D  AF  M  LRL   
Sbjct: 496 PEEPEKRTRLWCHEDVVNVLEDHTGTKAIEGLVMKLPKTNRVCFDTIAFEKMKRLRL--- 552

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
                              L    VQ+        K LR+L W  +PL+  P NF  KN+
Sbjct: 553 -------------------LQLDNVQVIGDYKCFSKHLRWLSWQGFPLKYTPENFYQKNV 593

Query: 420 VELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
           V ++L+ S + Q W+      P  I+  K    L+    + L+  P           +FS
Sbjct: 594 VAMDLKHSNLTQVWKK-----PQLIEGLK---ILNLSHSKYLKRTP-----------DFS 634

Query: 480 YCVNLIEFPQISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
              NL           +L +    ++ EV  SI  L +L +L+L+ C  L  +     +L
Sbjct: 635 KLPNL----------EKLIMKDCQSLLEVHPSIGDLKNLLLLNLKDCTSLSNLPREIYQL 684

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
           R++ TLIL GC  ++   E + +ME L  + +  T + + P S 
Sbjct: 685 RTVETLILSGCSKIDKLEEDIVQMESLTTLMAANTGVKQPPFSI 728



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 6/181 (3%)

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL- 552
           V  + L  S + +V    + +  L++L+L   K LKR +  F KL +L  LI+  C +L 
Sbjct: 593 VVAMDLKHSNLTQVWKKPQLIEGLKILNLSHSKYLKR-TPDFSKLPNLEKLIMKDCQSLL 651

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           E  P I +    L     D T ++ LP     L  +E L +  CSK+D L ++I  +E L
Sbjct: 652 EVHPSIGDLKNLLLLNLKDCTSLSNLPREIYQLRTVETLILSGCSKIDKLEEDIVQMESL 711

Query: 613 YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES--FPRTFLLGLSAM--GLLHISDY 668
             ++AA + + Q P S+  S  +  +     +GL    FP      +S     + HIS +
Sbjct: 712 TTLMAANTGVKQPPFSIVRSKSIGYISLCGYEGLSHHVFPSLIRSWMSPTMNSVAHISPF 771

Query: 669 A 669
            
Sbjct: 772 G 772


>gi|30694675|ref|NP_851133.1| putative WRKY transcription factor 16 [Arabidopsis thaliana]
 gi|29839627|sp|Q9FL92.1|WRK16_ARATH RecName: Full=Probable WRKY transcription factor 16; AltName:
           Full=WRKY DNA-binding protein 16
 gi|10177497|dbj|BAB10888.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007811|gb|AED95194.1| putative WRKY transcription factor 16 [Arabidopsis thaliana]
          Length = 1372

 Score =  291 bits (744), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 211/678 (31%), Positives = 330/678 (48%), Gaps = 97/678 (14%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ VGIWGM GIGKTTLAKA+FDQ S EF+  CF+ D     +  G    L++Q L    
Sbjct: 163 IRCVGIWGMPGIGKTTLAKAVFDQMSGEFDAHCFIEDYTKAIQEKGVYCLLEEQFLKENA 222

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
                V   ++    ++R+   ++L+VLDDV     ++  +G  D FG  S I++T++DK
Sbjct: 223 GASGTVTKLSL---LRDRLNNKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITSKDK 279

Query: 127 RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVL 186
            V    R  +  IY V GL  +EA + F   A  ++   ++L+  S  V+ Y  G+PL L
Sbjct: 280 SVFRLCRVNQ--IYEVQGLNEKEALQLFSLCASIDDMAEQNLHEVSMKVIKYANGHPLAL 337

Query: 187 EVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFE 246
            + G  L  K++    ++     + C   I    D +K S++ L  R K+IFLDIACFF+
Sbjct: 338 NLYGRELMGKKRPPEMEIAFLKLKECPPAI--FVDAIKSSYDTLNDREKNIFLDIACFFQ 395

Query: 247 GEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEP 303
           GE+ D+V  +L+         +D+L++KSLV+IS N + MH+++Q++GRQI+ +E+ ++ 
Sbjct: 396 GENVDYVMQLLEGCGFFPHVGIDVLVEKSLVTISENRVRMHNLIQDVGRQIINRET-RQT 454

Query: 304 GKRSRLWDPKEISRVLKHNKGT---------------DAIEGIFLDLSKIKGINLDPRAF 348
            +RSRLW+P  I  +L+  +                 + IEG+FLD S +   ++   AF
Sbjct: 455 KRRSRLWEPCSIKYLLEDKEQNENEEQKTTFERAQVPEEIEGMFLDTSNL-SFDIKHVAF 513

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
            NM NLRLFK Y             S+  ++ +    L   L  LP  LR LHW+ YPL+
Sbjct: 514 DNMLNLRLFKIY-------------SSNPEVHHVNNFLKGSLSSLPNVLRLLHWENYPLQ 560

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKA---------CVPSSIQNF------KYLSAL 453
            LP NF P +LVE+N+  S++++ W G K          C    + +       + L  +
Sbjct: 561 FLPQNFDPIHLVEINMPYSQLKKLWGGTKDLEMLKTIRLCHSQQLVDIDDLLKAQNLEVV 620

Query: 454 SFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSI-- 511
             +GC  L+SFP+    +    +N S C  +  FP+I   +  L L  + I E+P SI  
Sbjct: 621 DLQGCTRLQSFPATGQLLHLRVVNLSGCTEIKSFPEIPPNIETLNLQGTGIIELPLSIVK 680

Query: 512 ----------------ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
                             +++LE  DL+    L +ISTS+     L  L L  C  L   
Sbjct: 681 PNYRELLNLLAEIPGLSGVSNLEQSDLKPLTSLMKISTSYQNPGKLSCLELNDCSRLRSL 740

Query: 556 PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
           P ++                        NL  L+ L +  CS+L+ +     +L+ LY +
Sbjct: 741 PNMV------------------------NLELLKALDLSGCSELETIQGFPRNLKELYLV 776

Query: 616 LAAASAISQLPSSVALSN 633
             A   + QLP S+   N
Sbjct: 777 GTAVRQVPQLPQSLEFFN 794



 Score = 47.4 bits (111), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 19/207 (9%)

Query: 658 SAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNML 717
           + + LLH  +Y ++ +PQ    +  +EI  +  +  + L    K +  L+ I L     L
Sbjct: 547 NVLRLLHWENYPLQFLPQNFDPIHLVEI-NMPYSQLKKLWGGTKDLEMLKTIRLCHSQQL 605

Query: 718 QSLPELPLCLKYLHLID---CKMLQSLPVLP--FCLESLDLTGCNMLRSLPELPLCLQYL 772
             + +L L  + L ++D   C  LQS P       L  ++L+GC  ++S PE+P  ++ L
Sbjct: 606 VDIDDL-LKAQNLEVVDLQGCTRLQSFPATGQLLHLRVVNLSGCTEIKSFPEIPPNIETL 664

Query: 773 NLEDCNMLRSLPELPLCLQLLTVRN-CNRLQSLPEI--LLCLQELDASVLEKLSKHSPDL 829
           NL+   ++    ELPL +     R   N L  +P +  +  L++ D   L  L K S   
Sbjct: 665 NLQGTGII----ELPLSIVKPNYRELLNLLAEIPGLSGVSNLEQSDLKPLTSLMKISTSY 720

Query: 830 QWAPESLKSAAICFEFTNCLKLNGKAN 856
           Q  P  L     C E  +C +L    N
Sbjct: 721 Q-NPGKLS----CLELNDCSRLRSLPN 742



 Score = 46.2 bits (108), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 5/86 (5%)

Query: 221  DILKISFNKLTPRVKSIFLDIACFFEGEDKDFVA----SILDDSESDVLDILIDKSLVSI 276
            ++L++ +  L    K++FL IA  F  ED   VA    +I+D   S  L +L  +SL+ +
Sbjct: 1049 EVLRVRYAGLQEIYKALFLYIAGLFNDEDVGLVAPLIANIIDMDVSYGLKVLAYRSLIRV 1108

Query: 277  SGNF-LNMHDILQEMGRQIVRQESEK 301
            S N  + MH +L++MG++I+  ES+K
Sbjct: 1109 SSNGEIVMHYLLRQMGKEILHTESKK 1134



 Score = 40.8 bits (94), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 131/308 (42%), Gaps = 65/308 (21%)

Query: 682 SLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           +LE++ L G    +S PA   Q+  LR ++L     ++S PE+P  ++ L+L    +++ 
Sbjct: 616 NLEVVDLQGCTRLQSFPAT-GQLLHLRVVNLSGCTEIKSFPEIPPNIETLNLQGTGIIE- 673

Query: 741 LP---VLPFCLESLDL-------TGCNMLRSLPELPLC--------------LQYLNLED 776
           LP   V P   E L+L       +G + L      PL               L  L L D
Sbjct: 674 LPLSIVKPNYRELLNLLAEIPGLSGVSNLEQSDLKPLTSLMKISTSYQNPGKLSCLELND 733

Query: 777 CNMLRSLPELP--LCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPE 834
           C+ LRSLP +     L+ L +  C+ L+++      L+EL   ++    +  P L  + E
Sbjct: 734 CSRLRSLPNMVNLELLKALDLSGCSELETIQGFPRNLKEL--YLVGTAVRQVPQLPQSLE 791

Query: 835 --------SLKSAAICFE-------FTNCLKLNGKANNKILADSLLRI--RHMAIASLRL 877
                   SLKS  + F+       F+NC  L+ +  N  L  ++  +  +H+       
Sbjct: 792 FFNAHGCVSLKSIRLDFKKLPVHYTFSNCFDLSPQVVNDFLVQAMANVIAKHIPRERHVT 851

Query: 878 GYEMAINEKLS-----ELRGSLIVLPGSEIPDWFSNQSS------GSSICIQLPPHSSCR 926
           G+     ++ S     EL  +L     S      +NQ+S      GSS   +L P  S R
Sbjct: 852 GFSQKTVQRSSRDSQQELNKTLAF---SFCAPSHANQNSKLDLQPGSSSMTRLDP--SWR 906

Query: 927 N-LIGFAF 933
           N L+GFA 
Sbjct: 907 NTLVGFAM 914


>gi|223403523|gb|ACM89261.1| disease resistance protein (TIR-NBS-LRR class) [Arabidopsis
           thaliana]
          Length = 1163

 Score =  291 bits (744), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 233/714 (32%), Positives = 352/714 (49%), Gaps = 81/714 (11%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           DS +T + VGI GM GIGKTTLA+ ++ ++ H+FE S F  D         G+  LQK++
Sbjct: 272 DSLET-KTVGIVGMPGIGKTTLAETLYRKWEHKFERSMFFPDA-SKMANEHGMCWLQKRL 329

Query: 62  LSTTLSE-KLEVAGPNIPH-FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           L   L +  L +      H F K+ +   K+ +V+D+V+   Q++ L G+ +    GS+I
Sbjct: 330 LEELLKDTNLNIGYTTNEHEFCKDVLLLKKVFLVIDNVSSEEQIETLFGKWNWIKNGSKI 389

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           V+T+ D+ +L+ F    K  Y V  L   ++   F N AF  +    +L   S+  ++Y 
Sbjct: 390 VITSSDESMLKGFV---KDTYVVPSLNSRDSLLWFTNHAFGLDDAQGNLVKLSKHFLNYA 446

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           KGNPL L   G  LC K K+ W K +  L  I    I D+   L+  +++LT R K IFL
Sbjct: 447 KGNPLALGAFGVELCGKDKADWEKRIKTLTLISNKMIQDV---LRRRYDELTERQKDIFL 503

Query: 240 DIACFFEGEDKDFVASILD--DSES----DVLDILIDKSLVSISGNFLNMHDILQEMGRQ 293
           D+ACFF+ E++ +V  +++  DSES    D +  L  K LV+ISG  + MHDIL    ++
Sbjct: 504 DVACFFKSENESYVRHVVNSCDSESTKSWDEITDLKGKFLVNISGGRVEMHDILCTFAKE 563

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMS 352
           +  Q   ++     RLW+ ++I   L +    + + GIFLD+SK+ + +  D   F+NM 
Sbjct: 564 LASQALTEDTRVHLRLWNYQDIMWFLNNELEMENVRGIFLDMSKVPEEMTFDGNIFSNMC 623

Query: 353 NLRLFKFYVPKFY-EIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
           NLR  K Y    + E E +    T  +     +QLP  LD    K+RYLHW  YP   LP
Sbjct: 624 NLRYLKIYSSVCHKEGEGIFKFDTVRE-----IQLP--LD----KVRYLHWMKYPWEKLP 672

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEK-------ACVPSS--------IQNFKYLSALSFK 456
           S+F P+NLV+L L  S +++ WEG K       A +  S        + N K L  L+ +
Sbjct: 673 SDFNPENLVDLELPYSSIKKVWEGVKDTPILKWANLSYSSKLTNLLGLSNAKNLERLNLE 732

Query: 457 GCQSLRSFPSNLH---------------FVCPVTINFSY--------CVNLIEFPQISGK 493
           GC SL   P  +                  C  +I  S         C  L EF  IS  
Sbjct: 733 GCTSLLKLPQEMENMKSLVFLNMRRCTSLTCLQSIKVSSLKILILSDCSKLEEFEVISEN 792

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           +  LYL  +AI+ +P +   LT L VL++ GC  L+ +     K ++L  L+L GC  LE
Sbjct: 793 LEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLPKRLGKQKALQELVLSGCSKLE 852

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
             P +++ M+HL+ +  D T I ++P     +  L+ L +     + NL DN+    YL 
Sbjct: 853 SVPTVVQDMKHLRILLLDGTRIRKIPK----IKSLKCLCLSRNIAMVNLQDNLKDFYYLK 908

Query: 614 -YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP------RTFLLGLSAM 660
             ++     +  LPS   L   L  L+   C+ LES        R FL GL  +
Sbjct: 909 CLVMKNCENLRYLPS---LPKCLEYLNVYGCERLESVENPLVSDRLFLDGLEKL 959


>gi|351722733|ref|NP_001237766.1| functional candidate resistance protein KR1 [Glycine max]
 gi|18033111|gb|AAL56987.1|AF327903_1 functional candidate resistance protein KR1 [Glycine max]
          Length = 1124

 Score =  291 bits (744), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 243/754 (32%), Positives = 356/754 (47%), Gaps = 82/754 (10%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V ++GI G+GG+GKTTLA A+++  +  FE  CF+ +VR  S+  G L+HLQ+ 
Sbjct: 212 VGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFLQNVRETSKKHG-LQHLQRN 270

Query: 61  MLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           +LS    E   +         + R+R+ K+L++LDDV++  QL+ L G  D FG GSR++
Sbjct: 271 LLSEMAGEDKLIGVKQGISIIEHRLRQKKVLLILDDVDKREQLQALAGRPDLFGPGSRVI 330

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK++L     E  + Y VN L  E A E     AFK                +Y  
Sbjct: 331 ITTRDKQLLACHGVE--RTYEVNELNEEYALELLNWKAFKLEKVDPFYKDVLNRAATYAS 388

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL LEV+GS+L  K    W   L    RI   EI +I   LK+S++ L    +SIFLD
Sbjct: 389 GLPLALEVIGSNLSGKNIEQWISALDRYKRIPNKEIQEI---LKVSYDALEEDEQSIFLD 445

Query: 241 IACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSIS-GNFLNMHDILQEMGRQIV 295
           IAC F+  D   V  IL       +     +L++KSL+ IS   ++ +HD++++MG++IV
Sbjct: 446 IACCFKKYDLAEVQDILHAHHGHCMKHHIGVLVEKSLIKISLDGYVTLHDLIEDMGKEIV 505

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGI---FLDLSKIKGINLDPRAFTNMS 352
           R+ES +EPGKRSRLW P +I +VL+ NKGT  I  I   F    +   I  D  AF  M 
Sbjct: 506 RKESPQEPGKRSRLWLPTDIVQVLEENKGTSHIGIICMNFYSSFEEVEIQWDGDAFKKMK 565

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NL+                       L         G  + PK LR L W  YP    P 
Sbjct: 566 NLK----------------------TLIIRSGHFSKGPKHFPKSLRVLEWWRYPSHYFPY 603

Query: 413 NFKPKNLVELNL-RCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
           +F+ + L   NL  C    +    E A +    + F  L++L+F  CQ L   P      
Sbjct: 604 DFQMEKLAIFNLPDCGFTSR----ELAAMLK--KKFVNLTSLNFDSCQHLTLIPDVSCVP 657

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
               ++F  C NL                      +  S+  L  L +LD  GC RLK  
Sbjct: 658 HLQKLSFKDCDNLY--------------------AIHPSVGFLEKLRILDAEGCSRLKNF 697

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
                KL SL  L L  C +LE+FPEIL KME++  +  ++TP+ + P SF+NL  LE +
Sbjct: 698 PP--IKLTSLEQLKLGFCHSLENFPEILGKMENITELDLEQTPVKKFPLSFQNLTRLETV 755

Query: 592 FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC---KGLES 648
            +  C      P N  +     ++    S I  +  S  L N++  +    C   K  E 
Sbjct: 756 LL--C-----FPRNQANGCTGIFL----SNICPMQESPELINVI-GVGWEGCLFRKEDEG 803

Query: 649 FPRTFLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
                L   S +  L + +  + +   P  +   +++  L LSGNNF  +P  IK+   L
Sbjct: 804 AENVSLTTSSNVQFLDLRNCNLSDDFFPIALPCFANVMELNLSGNNFTVIPECIKECRFL 863

Query: 707 RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
             ++L     L+ +  +P  LKY +  +C  L S
Sbjct: 864 TTLYLNYCERLREIRGIPPNLKYFYAEECLSLTS 897


>gi|15238808|ref|NP_197338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005162|gb|AED92545.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1210

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 257/875 (29%), Positives = 407/875 (46%), Gaps = 153/875 (17%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVR----------GN--- 47
            ++SSD V+++GI G  GIGKTT+A+ ++DQ S +F+ S F+ ++R          GN   
Sbjct: 250  LESSD-VRMIGILGPPGIGKTTIARVLYDQISEKFQFSAFIENIRLSYWKGWHDEGNLDF 308

Query: 48   -SETAGGLEHLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLK 104
              E   G    +  +    LSE        + H    +ER+R  K+L++LD V+++ QL 
Sbjct: 309  PVEIMTGDRQRKLNLQRRLLSELFNQKDIQVRHLGAVQERLRDHKVLVILDGVDQLEQLT 368

Query: 105  RLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHC 164
             L  E   FG GSRI++TT+D+R+L     E   +Y+V+    +EA + FC +AF +   
Sbjct: 369  ALAKETQWFGYGSRIIITTQDQRLLRAH--EINHVYKVDLPATDEALQIFCLYAFGQKFP 426

Query: 165  PEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILK 224
             +     +R   +     PL L VLGS L       W   L  L    + EI      L+
Sbjct: 427  YDGFKKLAREFTALAGELPLGLRVLGSYLRGMSLEEWKNALPRLRTSLDGEIEKT---LR 483

Query: 225  ISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFL 281
             ++N L+ + KS+FL IAC F G   + V   L +S  DV    ++L +KSL+S     +
Sbjct: 484  FAYNVLSDKDKSLFLHIACLFNGCQVNHVKQWLANSSLDVNHGFEVLSNKSLISTDMGLV 543

Query: 282  NMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGI 341
             MH +LQ++G  IVR++S  EP KR  L D  EIS V+  N GT  I GI L +SKI+ +
Sbjct: 544  RMHSLLQQLGVDIVRKQSIGEPEKRQFLVDVNEISDVITDNTGTGTILGIMLHVSKIEDV 603

Query: 342  -NLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYL 400
              ++   F  M+NL+                     ++    K+ LP GL+ LP+K+R L
Sbjct: 604  LVIEETVFDRMTNLQFLIL-----------------DECLRDKLNLPLGLNCLPRKIRLL 646

Query: 401  HWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQS 460
             WD  PL   PS F  K LVEL +R +K E+ WEG        IQ  K L  +     ++
Sbjct: 647  RWDYCPLSIWPSKFSAKFLVELIMRANKFEKLWEG--------IQPLKNLKRMELGDARN 698

Query: 461  LRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVL 520
            L+  P   +     ++  S+C +L+                    E+PSSI   T+L+ L
Sbjct: 699  LKEIPDLSNATNLESLLLSFCTSLL--------------------EIPSSIRGTTNLKEL 738

Query: 521  DLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPS 580
            DL GC  L ++S+  C   SL  L L  C NL   P                     LP 
Sbjct: 739  DLGGCASLVKLSSCICNATSLEELNLSACSNLVELP-------------------CALPG 779

Query: 581  SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS 640
               N+  L  L +   S+L   P+   +++ L     + +AI ++PSS+ L + L  LD 
Sbjct: 780  D-SNMRSLSKLLLNGSSRLKTFPEISTNIQELNL---SGTAIEEVPSSIRLWSRLDKLDM 835

Query: 641  SHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSL-EILYLSGNNFESLPAI 699
            S CK L+ FP         + +L++S+  + +IP  +  LS L   + +     +++   
Sbjct: 836  SRCKNLKMFPPV----PDGISVLNLSETEIEDIPPWVENLSQLRHFVMIRCKKLDNIS-- 889

Query: 700  IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH---------LIDCKMLQSLPVLPFCLES 750
            + ++S++  +H               CL+            +++ +   + P   + L+S
Sbjct: 890  LSRISKMEGVH---------------CLQITRGDEDVSGDSIVNIRWYSNFPN-QWTLQS 933

Query: 751  LDLTGCNMLRSLPEL----PLCLQYLNLEDCNMLRSLPELPLC------LQLLTVRNCNR 800
              L  C     LPEL    P+ L +++    N  +++P+   C      L  L+   C++
Sbjct: 934  DMLQIC-----LPELVYTSPVSLHFIS----NEFKTIPD---CIKNLSQLHQLSFYRCHK 981

Query: 801  LQSLPEILLCLQELDAS---VLEKL--SKHSPDLQ 830
            L SLP++  CL  LDA     LE +  S H+PD++
Sbjct: 982  LVSLPQLSDCLSSLDAENCVSLETIDGSFHNPDIR 1016


>gi|358248732|ref|NP_001239675.1| TMV resistance protein N-like [Glycine max]
 gi|295083323|gb|ADF78115.1| rj2 protein [Glycine max]
 gi|295083325|gb|ADF78116.1| rj2 protein [Glycine max]
 gi|295083327|gb|ADF78117.1| rj2 protein [Glycine max]
 gi|308171400|gb|ADO15994.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1051

 Score =  290 bits (742), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 261/794 (32%), Positives = 375/794 (47%), Gaps = 117/794 (14%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V ++GI G+GGIGK+TLA A+++  +  F+GSCF+ D+R  S    GL+HLQ  
Sbjct: 205 VESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREKS-NKKGLQHLQSI 263

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +L   L EK      +E     I H    R++R K+L++LDDV++  QL+ ++G    FG
Sbjct: 264 LLREILGEKEINLASVEQGASIIQH----RLQRKKVLLILDDVDKHEQLQAIVGRPCWFG 319

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK++L       K+ Y V  L    A +     +FK              
Sbjct: 320 PGSRVIITTRDKQLLASHG--VKRTYEVELLNENNALQLLTWKSFKTEKVDPSYKEVLND 377

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV Y  G PL LEV+GS+L  K    W   +    RI   +I    +ILK+SF+ L    
Sbjct: 378 VVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQI---LEILKVSFDALEEEQ 434

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNF------LNMH 284
           K++FLDIAC F   D   V  IL     D +     +L++KSL+    ++      + MH
Sbjct: 435 KNVFLDIACCFNRYDLTKVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPRVTMH 494

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLD---LSKIKGI 341
           D++++MG++IVRQES KEP KRSRLW P++I +VL+ NKGT  IE I LD     K + +
Sbjct: 495 DLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIQVLEDNKGTSEIEIICLDFPCFGKEEIV 554

Query: 342 NLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLH 401
            L+ +AF  M NL+       KF                        G  YLP  LR L 
Sbjct: 555 ELNTKAFKKMKNLKTLIIRNGKF----------------------SKGPKYLPNNLRVLE 592

Query: 402 WDTYPLRTLPSNFKPKNLVELNLRCSKVEQ-PWEGEKACVPSSIQNFKYLSALSFKGCQS 460
           W  YP   LPS+F PK L    L  S +    W+G         + F  L  L+F GC+ 
Sbjct: 593 WWRYPSHCLPSDFHPKKLSICKLPYSCISSFEWDG-------LWKMFVNLRTLNFDGCKC 645

Query: 461 LRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVL 520
           L   P           +F +C+NLI                     V +SI  L  L+ L
Sbjct: 646 LTQIPDVSGLPNLEEFSFEHCLNLI--------------------TVHNSIGFLDKLKTL 685

Query: 521 DLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPS 580
           +   CKRL+       KL SL  L L  C +LE FP+IL KME+++ +    + ITEL  
Sbjct: 686 NAFRCKRLRSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRELCLSNSSITELSF 743

Query: 581 SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS 640
           SF+NL GL+ L                 L +L     +  AI ++PSS+ L   L  +  
Sbjct: 744 SFQNLAGLQAL----------------DLSFL-----SPHAIFKVPSSIVLMPELTEIFV 782

Query: 641 SHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ-----------EIAYLSSLEILYLS 689
              KG +   +    G    G + +S   VR               +  + + ++ L LS
Sbjct: 783 VGLKGWQWLKQE--EGEEKTGSI-VSSKVVRLTVAICNLSDEFFSIDFTWFAHMKELCLS 839

Query: 690 GNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLE 749
            NNF  LP  IK+   LR + + D   L+ +  +P  LK+   I+CK L S  +  F  +
Sbjct: 840 ENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLKHFFAINCKSLTSSSISKFLNQ 899

Query: 750 SLDLTGCNMLRSLP 763
            L   G N +  LP
Sbjct: 900 ELHEAG-NTVFCLP 912



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 130/296 (43%), Gaps = 29/296 (9%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +T++P     LP LE    E C  L  + ++IG L+ L  + A      +    + L++ 
Sbjct: 646 LTQIPD-VSGLPNLEEFSFEHCLNLITVHNSIGFLDKLKTLNAFRCKRLRSFPPIKLTS- 703

Query: 635 LRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIP---QEIAYLSSLEILYLSG 690
           L  L+ S C  LESFP+  +LG +  +  L +S+ ++ E+    Q +A L +L++ +LS 
Sbjct: 704 LEKLNLSFCYSLESFPK--ILGKMENIRELCLSNSSITELSFSFQNLAGLQALDLSFLSP 761

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ-SLPVLPFCLE 749
           +    +P+ I  M +L  I +      Q L +     K   ++  K+++ ++ +     E
Sbjct: 762 HAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRLTVAICNLSDE 821

Query: 750 --SLDLTGCNMLRSL-------PELPLC------LQYLNLEDCNMLRSLPELPLCLQLLT 794
             S+D T    ++ L         LP C      L+ L++ DC  LR +  +P  L+   
Sbjct: 822 FFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLKHFF 881

Query: 795 VRNCNRLQSLPEILLCLQELDA---SVLEKLSKHSPDLQWAPESLKSAAICFEFTN 847
             NC  L S        QEL     +V     K  P  +W  +  +  +I F F N
Sbjct: 882 AINCKSLTSSSISKFLNQELHEAGNTVFCLPGKRIP--EWFDQQSRGPSISFWFRN 935


>gi|227438157|gb|ACP30568.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1030

 Score =  290 bits (742), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 223/675 (33%), Positives = 337/675 (49%), Gaps = 68/675 (10%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV-----RGNSETAGGLEHLQ 58
           S  V+IVG+WG  GIGKTT+A+A++ + S  F+ S F+ ++     R + +  G   HLQ
Sbjct: 203 SSEVRIVGVWGPAGIGKTTIARALYTRLSPIFQHSAFMGNIKETYRRISLDDYGSKLHLQ 262

Query: 59  KQMLSTTLSEKLEVAGPNIPH--FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           ++ LS  ++ K       IPH    +ER++  ++ +VLDDV+E+ QL  L  E   FG G
Sbjct: 263 EEFLSKLINHK----DVKIPHSGVVRERLKDKRVFVVLDDVDELEQLIALAKEPRWFGSG 318

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP----EDLNWHS 172
           SRIVVTT+D+++L K  G +  +Y+V      EA E FC  AF + H P     +L    
Sbjct: 319 SRIVVTTQDRQLL-KAHGIDL-VYKVELPSRLEALEIFCQSAFGQKHPPCVGIRELALQV 376

Query: 173 RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
             +  Y    PL L VLGS L    K  W   +  LN   + +I      L+ S++ L  
Sbjct: 377 THLAGYL---PLGLTVLGSYLRGFSKEEWEYAIPRLNTSLDGKI---XKTLRFSYDALHS 430

Query: 233 RVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQE 289
           + KSIFL IAC F G++   V  +L++S  DV   L  L DKSL+      ++MH +LQ+
Sbjct: 431 KDKSIFLHIACLFNGKNVXDVKMLLENSNLDVDHGLKALADKSLIDTHWGRIHMHSLLQK 490

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAF 348
           MGR+IV Q+S  EPGKR  L D +EI  VL    GT  + GI  D SKI G +++  +AF
Sbjct: 491 MGREIVCQQSVHEPGKRQFLVDAEEIRDVLACKSGTATVLGISFDASKINGELSISKKAF 550

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M NL+  + Y               ++    S++ LP GL+YLP KLR LHWD++P+R
Sbjct: 551 KGMHNLQFLEIY---------------KKWNGRSRLNLPQGLNYLPHKLRLLHWDSFPMR 595

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
           +LPS F  + LVEL +R SK+E+ WEG        I   + L  +     + L+  P+  
Sbjct: 596 SLPSKFSAEFLVELRMRFSKLEKLWEG--------IIPLRSLKVMDVSYSRKLKEIPNLS 647

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
           +       +   C +L  FP +   +  L L  + I EVP  I+ L  L+ + +  C +L
Sbjct: 648 NATNLKKFSADGCESLSAFPHVPNCIEELELSYTGIIEVPPWIKNLCGLQRVCMTQCSKL 707

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE------LPSSF 582
             IS +  KL +L  +   G ++   F  I+  +  +K+  + +    E      LP   
Sbjct: 708 TNISMNVSKLENLEEVDFSGSVDGILFTAIVSWLSGVKKRLTIKANNIEEMLPKCLPRKA 767

Query: 583 ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAA----SAISQLPSSVALSNMLRSL 638
              P L  L +     +  +PD I     L+ +        +++ QLP S      L  L
Sbjct: 768 YTSPVL--LDLSGNEDIKTIPDCIKHFSQLHKLDVGKCRKLTSLPQLPES------LSEL 819

Query: 639 DSSHCKGLESFPRTF 653
           ++  C+ LE    +F
Sbjct: 820 NAQECESLERIHGSF 834



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 114/243 (46%), Gaps = 29/243 (11%)

Query: 502 SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
           S +E++   I  L  L+V+D+   ++LK I  +     +L      GC +L  FP +   
Sbjct: 614 SKLEKLWEGIIPLRSLKVMDVSYSRKLKEIP-NLSNATNLKKFSADGCESLSAFPHVPNC 672

Query: 562 MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASA 621
           +E L+  Y   T I E+P   +NL GL+ + +  CSKL N+  N+  LE L  +  + S 
Sbjct: 673 IEELELSY---TGIIEVPPWIKNLCGLQRVCMTQCSKLTNISMNVSKLENLEEVDFSGSV 729

Query: 622 ISQLPSSVA--LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
              L +++   LS + + L        E  P+                     +P++ AY
Sbjct: 730 DGILFTAIVSWLSGVKKRLTIKANNIEEMLPKC--------------------LPRK-AY 768

Query: 680 LSSLEILYLSGN-NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
            S + +L LSGN + +++P  IK  SQL  + +     L SLP+LP  L  L+  +C+ L
Sbjct: 769 TSPV-LLDLSGNEDIKTIPDCIKHFSQLHKLDVGKCRKLTSLPQLPESLSELNAQECESL 827

Query: 739 QSL 741
           + +
Sbjct: 828 ERI 830



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 154/382 (40%), Gaps = 94/382 (24%)

Query: 554 HFPEILEKMEH-LKRIYSDRTPITELPSSF--ENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
           + P+ L  + H L+ ++ D  P+  LPS F  E L  L + F    SKL+ L + I  L 
Sbjct: 572 NLPQGLNYLPHKLRLLHWDSFPMRSLPSKFSAEFLVELRMRF----SKLEKLWEGIIPLR 627

Query: 611 YLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA 669
            L  + ++ +  + ++P+    +N L+   +  C+ L +FP       + +  L +S   
Sbjct: 628 SLKVMDVSYSRKLKEIPNLSNATN-LKKFSADGCESLSAFPHV----PNCIEELELSYTG 682

Query: 670 VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN------MLQSLPEL 723
           + E+P  I  L  L+ + ++      L  I   +S+L  +   DF+      +  ++   
Sbjct: 683 IIEVPPWIKNLCGLQRVCMT--QCSKLTNISMNVSKLENLEEVDFSGSVDGILFTAIVSW 740

Query: 724 PLCLKYLHLIDCKMLQSLPVLPFCLES--------LDLTGCNMLRSLPELPLCLQYLNLE 775
              +K    I    ++ +  LP CL          LDL+G   ++++P+   C+++ +  
Sbjct: 741 LSGVKKRLTIKANNIEEM--LPKCLPRKAYTSPVLLDLSGNEDIKTIPD---CIKHFSQ- 794

Query: 776 DCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSK-----HSPDLQ 830
                         L  L V  C +L SLP++   L EL+A   E L +     H+PD  
Sbjct: 795 --------------LHKLDVGKCRKLTSLPQLPESLSELNAQECESLERIHGSFHNPD-- 838

Query: 831 WAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSEL 890
                     IC  F NCLKLN +A   I A                             
Sbjct: 839 ----------ICLNFANCLKLNREARELICASP--------------------------- 861

Query: 891 RGSLIVLPGSEIPDWFSNQSSG 912
                +LPG E P  F +Q+SG
Sbjct: 862 -SRYTILPGEEQPGMFKDQTSG 882


>gi|255556649|ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223541425|gb|EEF42975.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score =  290 bits (742), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 226/677 (33%), Positives = 341/677 (50%), Gaps = 105/677 (15%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           D S  V I  I+G+GGIGKTTLAK IF+Q   +F+G+ F+++VR  SE + GL  LQ+++
Sbjct: 213 DDSKDVGIATIYGVGGIGKTTLAKIIFNQNFDKFDGASFLANVRETSEQSNGLVRLQRKV 272

Query: 62  LSTTL---SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           LS  L   + K+      I    K+ + R ++L++LDD++++ Q   +IG  + F  GS+
Sbjct: 273 LSDLLKGKTSKIYNVDEGIIKI-KDAICRRRVLLILDDLDQLDQFNSIIGMQEWFFPGSK 331

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I+ TTR +R+L     E  K++RVN L+  E+ + F   +F ++H  E     S+  V  
Sbjct: 332 IIATTRHERLLRAH--EVSKLFRVNELDSNESLQLFSWHSFGQDHPVEVFEQQSKRAVDL 389

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL-TPRVKSI 237
             G PL L+VLGSSL  K    W   L  L  + +S+I  I   L++S++ L     K++
Sbjct: 390 CSGLPLALQVLGSSLSGKSIEVWESALQKLEAVPDSKIQKI---LRVSYDSLEDDHDKNL 446

Query: 238 FLDIACFFEGEDKDFVASILDDSE-SDVLDI--LIDKSLVSIS-GNFLNMHDILQEMGRQ 293
           FLDIACFF G +K++V SIL   +   V+ I  LI + L++I+ GN L +H +L++MGR+
Sbjct: 447 FLDIACFFTGMEKNYVISILQGCKFYAVVGINNLIGRCLLTINEGNKLIIHQLLRDMGRE 506

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLD--PRAFTNM 351
           IVRQES ++PGKRSR+W  K+   +L+ N GT+ ++G+ LDL  +K  N D   +AF  M
Sbjct: 507 IVRQESPEDPGKRSRVWRDKDAFNLLRENTGTETVKGLTLDLQMLKEANTDLKTKAFGEM 566

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
           + L+L +                         V+L    +  PK L +L W  +PLR +P
Sbjct: 567 NKLKLLRLNC----------------------VKLSGDCEDFPKGLVWLFWRGFPLRCIP 604

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSAL----SFKGCQSLRSFPSN 467
           +NF    L  L++R S +   W+G +  V   I N  +   L    +F G  SL      
Sbjct: 605 NNFHLDKLAVLDMRKSSLINVWKGTRLLVALKILNLSHSHCLVKTPNFMGLPSLER---- 660

Query: 468 LHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKR 527
                   +    CVNLI+  +  G + RL                     VLDLRGC+ 
Sbjct: 661 --------LKLKDCVNLIDLDESIGYLRRLI--------------------VLDLRGCRN 692

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR--------------- 572
           +KR+      L SL  L L GC  L+  PE + KM+ LK +Y+D                
Sbjct: 693 VKRLPVEIGMLESLEKLNLCGCSKLDQLPEEMRKMQSLKVLYADADCNLSDVAIPNDLRC 752

Query: 573 -----------TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASA 621
                       PI  +P S  +L  L+ L ++ C++L +LP    SLE L      A  
Sbjct: 753 LRSLESLDLKGNPIYSIPESINSLTTLQYLCLDKCTRLQSLPQLPTSLEEL-----KAEG 807

Query: 622 ISQLPSSVALSNMLRSL 638
            + L     L N+L +L
Sbjct: 808 CTSLERITNLPNLLSTL 824



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 203/472 (43%), Gaps = 56/472 (11%)

Query: 602  LPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMG 661
            +P+N   L+ L  +    S++  +     L   L+ L+ SH   L   P    +GL ++ 
Sbjct: 603  IPNNF-HLDKLAVLDMRKSSLINVWKGTRLLVALKILNLSHSHCLVKTPN--FMGLPSLE 659

Query: 662  LLHISD-YAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQS 719
             L + D   + ++ + I YL  L +L L G  N + LP  I  +  L  ++L   + L  
Sbjct: 660  RLKLKDCVNLIDLDESIGYLRRLIVLDLRGCRNVKRLPVEIGMLESLEKLNLCGCSKLDQ 719

Query: 720  LPELPLCLKYLHLI----DCKMLQ-SLPVLPFCL---ESLDLTGCNMLRSLPELP---LC 768
            LPE    ++ L ++    DC +   ++P    CL   ESLDL G N + S+PE       
Sbjct: 720  LPEEMRKMQSLKVLYADADCNLSDVAIPNDLRCLRSLESLDLKG-NPIYSIPESINSLTT 778

Query: 769  LQYLNLEDCNMLRSLPELPLCLQLLTVRNCN---RLQSLPEILLCLQ-EL----DASVLE 820
            LQYL L+ C  L+SLP+LP  L+ L    C    R+ +LP +L  LQ EL        ++
Sbjct: 779  LQYLCLDKCTRLQSLPQLPTSLEELKAEGCTSLERITNLPNLLSTLQVELFGCGQLVEVQ 838

Query: 821  KLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYE 880
             L K  P +           +  E  N L L+   N   L  S +++   AIA+  +   
Sbjct: 839  GLFKLEPTIN----------MDIEMMNGLGLH---NFSTLGSSEMKM-FSAIANREMRSP 884

Query: 881  MAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSK 940
              +   L E       L G+E+P WF ++S+GSS+   + P S  + + G   C V    
Sbjct: 885  PQV---LQECGIVSFFLAGNEVPHWFDHKSTGSSLSFTINPLSDYK-IRGLNLCTVYAR- 939

Query: 941  KVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVG-F 999
              D + + + + +  +    +  +ETK  +  Y+  +     D D  +L        G F
Sbjct: 940  --DHEVY-WLHAAGHY---ARMNNETKGTNWSYSPTFYALPEDDDEDMLWLSYWKFGGEF 993

Query: 1000 PDGYHHTIATFKFFAERKFYKIKRCGLCPVY-ANPSETKDNTFTINFATEVW 1050
              G    ++    F     Y +K CG+  VY  N  + + NT  I  +   W
Sbjct: 994  EVGDKVNVSVRMPFG----YYVKECGIRIVYEENEKDNQSNTADIIPSNSFW 1041



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 92/187 (49%), Gaps = 11/187 (5%)

Query: 581 SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLD 639
           +F  LP LE L ++DC  L +L ++IG L  L  + L     + +LP  + +   L  L+
Sbjct: 651 NFMGLPSLERLKLKDCVNLIDLDESIGYLRRLIVLDLRGCRNVKRLPVEIGMLESLEKLN 710

Query: 640 SSHCKGLESFPRTF-----LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFE 694
              C  L+  P        L  L A    ++SD A   IP ++  L SLE L L GN   
Sbjct: 711 LCGCSKLDQLPEEMRKMQSLKVLYADADCNLSDVA---IPNDLRCLRSLESLDLKGNPIY 767

Query: 695 SLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESL--D 752
           S+P  I  ++ L+++ L+    LQSLP+LP  L+ L    C  L+ +  LP  L +L  +
Sbjct: 768 SIPESINSLTTLQYLCLDKCTRLQSLPQLPTSLEELKAEGCTSLERITNLPNLLSTLQVE 827

Query: 753 LTGCNML 759
           L GC  L
Sbjct: 828 LFGCGQL 834


>gi|297801410|ref|XP_002868589.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314425|gb|EFH44848.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1456

 Score =  290 bits (742), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 216/656 (32%), Positives = 346/656 (52%), Gaps = 71/656 (10%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH------LQ 58
           D V+++GIWG  GIGKTT+A+ +F+Q S  F   CF+ +++G  ++  G++       LQ
Sbjct: 203 DEVKMIGIWGPAGIGKTTIARTLFNQLSTSFRFICFMGNLKGKYKSVVGMDDYDSKLCLQ 262

Query: 59  KQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            Q+LS  L ++ ++   N+    KE ++  ++LI+LDDV+++ +L+ L  E   FG GSR
Sbjct: 263 NQLLSKILGQR-DMRVHNLGAI-KEWLQDQRVLIILDDVDDIEKLEALAKEPSWFGSGSR 320

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I+VTT DK++L+    +  + Y V+    EEA E  C  AFK++   +     +  +V +
Sbjct: 321 IIVTTEDKKILKAHWVD--RFYLVDFPSEEEALEILCLSAFKQSTVRDGFMELANKIVEF 378

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
               PL L V+GSSL  + K  W      L+RI  S    I D+L++ ++KL+ + +S+F
Sbjct: 379 CGYLPLGLSVVGSSLRGESKHEWE---LQLSRIGTSLDRKIEDVLRVGYDKLSKKDQSLF 435

Query: 239 LDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
           L IACFF  +  D V ++L DS  DV   L  L++KSL+SI   ++ MH +L+++GRQIV
Sbjct: 436 LHIACFFNSKKFDHVTTLLADSNLDVSNGLKTLVEKSLISICW-WIEMHRLLEQLGRQIV 494

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
            ++S+ EPGKR  L + +EI  VL++  GT ++ GI  D+SK   +++  RAF  M NL+
Sbjct: 495 IEQSD-EPGKRQFLVEAEEIRDVLENETGTGSVIGISFDMSKNVKLSISKRAFEGMRNLK 553

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
             +FY   F      P   +        +++   +DYLP +LR L W  YP + LP  F+
Sbjct: 554 FLRFYKADF-----CPGNVS--------LRILEDIDYLP-RLRLLDWYAYPGKRLPPTFQ 599

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
           P+ L+EL+++ SK+E+ WEG        IQ  K L  +       L+  P   +      
Sbjct: 600 PEYLIELHMKFSKLEKLWEG--------IQPLKNLKEIDLSFSYKLKEIPDLSNASKLKI 651

Query: 476 INFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF 535
           +  SYC +L++ P                    SSI  L  L+ L++  C++LK I T+ 
Sbjct: 652 LTLSYCTSLVKLP--------------------SSISNLQKLKKLNVSSCEKLKVIPTNI 691

Query: 536 CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
             L SL  + +  C  L  FP+I   ++ L  + +     +  PSSF  L  LE LF+  
Sbjct: 692 -NLASLEEVDMSFCSLLRSFPDISRNIKKLNVVSTQIEKGS--PSSFRRLSCLEELFIGG 748

Query: 596 CS--KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            S  +L ++P ++  L+       + S I ++P  V     L+SL    C  L S 
Sbjct: 749 RSLERLTHVPVSLKKLDI------SHSGIEKIPDCVLGLQQLQSLIVESCTKLVSL 798



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 161/398 (40%), Gaps = 108/398 (27%)

Query: 558 ILEKMEHLKRI-----YSDRTPITELPSSF--ENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
           ILE +++L R+     Y+   P   LP +F  E L  L + F    SKL+ L + I  L+
Sbjct: 571 ILEDIDYLPRLRLLDWYA--YPGKRLPPTFQPEYLIELHMKF----SKLEKLWEGIQPLK 624

Query: 611 YLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD-Y 668
            L  I L+ +  + ++P  ++ ++ L+ L  S+C  L   P + +  L  +  L++S   
Sbjct: 625 NLKEIDLSFSYKLKEIPD-LSNASKLKILTLSYCTSLVKLPSS-ISNLQKLKKLNVSSCE 682

Query: 669 AVREIPQEIAYLSSLEILYLSGNNF-ESLPAIIKQMSQLRFIHLE-------DFNMLQSL 720
            ++ IP  I  L+SLE + +S  +   S P I + + +L  +  +        F  L  L
Sbjct: 683 KLKVIPTNIN-LASLEEVDMSFCSLLRSFPDISRNIKKLNVVSTQIEKGSPSSFRRLSCL 741

Query: 721 PELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLN---LEDC 777
            EL         I  + L+ L  +P  L+ LD++    +  +P+  L LQ L    +E C
Sbjct: 742 EEL--------FIGGRSLERLTHVPVSLKKLDISHSG-IEKIPDCVLGLQQLQSLIVESC 792

Query: 778 NMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLK 837
             L SL  LP  L  L  +NC  L    E + C                        S +
Sbjct: 793 TKLVSLTSLPPSLVSLNAKNCVSL----ERVCC------------------------SFQ 824

Query: 838 SAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSL-IV 896
                  F NCLKL+ +A   I+                              RG   + 
Sbjct: 825 DPIKDLRFYNCLKLDEEARRAIIHQ----------------------------RGDWDVC 856

Query: 897 LPGSEIPDWFSNQSSGSSI-------------CIQLPP 921
           LPG E+P  F++++ G+SI             C+ LPP
Sbjct: 857 LPGKEVPAEFTHKAIGNSITTPLVGARSRFEACLLLPP 894


>gi|297798298|ref|XP_002867033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297312869|gb|EFH43292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 998

 Score =  290 bits (741), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 219/689 (31%), Positives = 335/689 (48%), Gaps = 84/689 (12%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ +GIWGM GIGKTTLAK +FDQ S  +E SCF+ +    +    GL  L ++     L
Sbjct: 147 IRRIGIWGMPGIGKTTLAKTVFDQISGGYEASCFIKNF-DMAFHEKGLHRLLEEHFGKIL 205

Query: 67  SEKLEVAGPNIPH--FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            E L     NI       E++R+++  +VLDDV+     +  +G    FG GS I++T+R
Sbjct: 206 KE-LPRESRNITRSSLPGEKLRKIRTFVVLDDVHNSLVAESFLGGFHWFGPGSLIIITSR 264

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           DK+V   F  +   +Y V  L   EA + F   AF ++   ++L   S+ V+ Y  GNPL
Sbjct: 265 DKQVFRHF--QINHVYEVQSLNENEALQLFSQCAFGKHIREQNLLELSKEVIDYANGNPL 322

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L   G  L  K+ S        L     +EIHD++   K S+  L    K+IFLDIACF
Sbjct: 323 ALRCYGRELKGKKLSEIETTFLKLKLRTPNEIHDLF---KSSYEALNDNEKNIFLDIACF 379

Query: 245 FEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           FEGE+ D+V  +L+         + +L++K L++IS N + MH I+Q+ GR+I   ++ +
Sbjct: 380 FEGENVDYVIQLLEGCGFFPHVGIGVLVEKCLMTISENRVKMHRIIQDFGREISNGQTVQ 439

Query: 302 EPGKRSRLWDPKEISRVLK---------------HNKGTDAIEGIFLDLSKIKGINLDPR 346
               R RLW+P+ I  +L+               H  GT+ IEGIFLD+S +   ++ P 
Sbjct: 440 IERCR-RLWEPRTIRFLLEDAKLETYGDPKATYTHALGTEDIEGIFLDISNLI-FDVKPG 497

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           AF NM +LR  K +   +               +Y  ++LP GL+ LP +LR LHW  YP
Sbjct: 498 AFENMLSLRYLKIFCSSYE--------------TYFGLRLPKGLESLPYELRLLHWVNYP 543

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA---------CVP------SSIQNFKYLS 451
           L++LP  F P +LVELNL  S++ + W G K          C        + I   + + 
Sbjct: 544 LQSLPQEFDPCHLVELNLSYSQLHKLWGGTKNLEMLKMVRLCHSQQLNEINDIGKAQNIE 603

Query: 452 ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSI 511
            +  +GC  L+SFP+         +N S C  +  FP++S  +  L+L  + I E+P S 
Sbjct: 604 LIDLQGCSKLQSFPAMGQLQHLRVVNLSGCTEIRSFPEVSPNIEELHLQGTGIRELPIST 663

Query: 512 ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM---EHLKRI 568
             L+    L+    + L    T F  +           LN E  P ++E +    HL ++
Sbjct: 664 VNLSPHVKLN----RELSNFLTEFPGVSD--------ALNHERLPSVVEAVLSYHHLGKL 711

Query: 569 ----YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQ 624
                 D   +  LP    +L  L+VL +  CS+LD++     +L+ LY    A   + Q
Sbjct: 712 VCLNMKDCVHLRSLP-QMADLESLKVLNLSGCSELDDIQGFPRNLKELYIGGTAVKKLPQ 770

Query: 625 LPSSVALSNMLRSLDSSHCKGLESFPRTF 653
           LP S      L  L++  C  L++ P  F
Sbjct: 771 LPQS------LEVLNAHGCVSLKAIPFGF 793



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 110/243 (45%), Gaps = 29/243 (11%)

Query: 564 HLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAI 622
           HL  +    + + +L    +NL  L+++ +    +L+ + D IG  + +  I L   S +
Sbjct: 555 HLVELNLSYSQLHKLWGGTKNLEMLKMVRLCHSQQLNEIND-IGKAQNIELIDLQGCSKL 613

Query: 623 SQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSS 682
              P+   L + LR ++ S C  + SFP         +  LH+    +RE+P     LS 
Sbjct: 614 QSFPAMGQLQH-LRVVNLSGCTEIRSFPEV----SPNIEELHLQGTGIRELPISTVNLSP 668

Query: 683 LEILYLSGNNF-------------ESLPAIIK------QMSQLRFIHLEDFNMLQSLPEL 723
              L    +NF             E LP++++       + +L  ++++D   L+SLP++
Sbjct: 669 HVKLNRELSNFLTEFPGVSDALNHERLPSVVEAVLSYHHLGKLVCLNMKDCVHLRSLPQM 728

Query: 724 P--LCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLR 781
                LK L+L  C  L  +   P  L+ L + G   ++ LP+LP  L+ LN   C  L+
Sbjct: 729 ADLESLKVLNLSGCSELDDIQGFPRNLKELYIGG-TAVKKLPQLPQSLEVLNAHGCVSLK 787

Query: 782 SLP 784
           ++P
Sbjct: 788 AIP 790



 Score = 43.1 bits (100), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 443 SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQS 502
           S  +   L  L+ K C  LRS P          +N S C  L +       +  LY+G +
Sbjct: 704 SYHHLGKLVCLNMKDCVHLRSLPQMADLESLKVLNLSGCSELDDIQGFPRNLKELYIGGT 763

Query: 503 AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM 562
           A++++P   +    LEVL+  GC  LK I   F  L    T    GC  L   P+++ K 
Sbjct: 764 AVKKLP---QLPQSLEVLNAHGCVSLKAIPFGFNHLPRYYTFS--GCSALS--PQVITKF 816


>gi|359486092|ref|XP_002274052.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 919

 Score =  290 bits (741), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 243/766 (31%), Positives = 369/766 (48%), Gaps = 96/766 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+AK ++++ S EFE   F+ ++ G      GL HLQ Q+L   L  ++      + H
Sbjct: 229 KTTIAKVVYNELSCEFECMSFLENI-GEVSNTQGLSHLQNQLLVDVLEGEVSQNMNGVAH 287

Query: 80  ---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
                K+ +   ++L+VLDDV+   QL+ L+G  +  G+GSR+++TTR+K VL   + + 
Sbjct: 288 KASMIKDILSSKRVLMVLDDVDHPSQLEYLLGHREWLGEGSRVIITTRNKHVLAVQKVD- 346

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
             +Y V GL FEE  E F  +AFK+N    D    +  VV Y +G PL L+VLGS L  K
Sbjct: 347 -NLYEVKGLNFEEDCELFSLYAFKQNLPKSDYRNLACRVVGYCQGLPLALKVLGSLLFNK 405

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
               W   LH L+R  E+EIH   ++LK S++ L    K+IFLD+ACFF+GED+DFV+ I
Sbjct: 406 TIPEWESELHKLDREPEAEIH---NVLKRSYDGLDRTEKNIFLDVACFFKGEDRDFVSRI 462

Query: 257 LDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           LD  +      +  L DK L+++  N + MHD++Q MG +IVR++   EP K SRLWDP 
Sbjct: 463 LDGCDFHAKRGIRNLNDKCLITLPYNEIRMHDLIQHMGWEIVREKFPDEPNKWSRLWDPC 522

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR-LFKFYVPKFYEIEKLPS 372
           +  R L   +  + ++ I L  S+ K I +    F+ M NL  LF        +I   PS
Sbjct: 523 DFERALTAYEDLERLKVIDLSYSR-KLIQMS--EFSRMPNLESLFLNGCVSLIDIH--PS 577

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
           +   ++L+   ++  + L  LP  +    WD   L  L  ++           CSK E+ 
Sbjct: 578 VGNLKKLTTLSLRSCDKLKNLPDSI----WDLESLEILNLSY-----------CSKFEK- 621

Query: 433 WEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI-NFSYCVNLIEFPQIS 491
                   P    N K L  L  K   +++  P ++  +  + I + S C    +FP+  
Sbjct: 622 -------FPGKGGNMKSLRKLHLKDT-AIKDLPDSIGDLESLEILDLSDCSKFEKFPEKG 673

Query: 492 GKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG 548
           G +    +L L  +AI+++P SI  L  LE LD+ G K                      
Sbjct: 674 GNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDVSGSK---------------------- 711

Query: 549 CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGS 608
               E FPE    M+ L ++    T I +LP S  +L  LE L + DCSK +  P+  G+
Sbjct: 712 ---FEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGN 768

Query: 609 LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY 668
           ++ L  +    +AI  LP S+     L  LD S C   E FP      +  +  LH+   
Sbjct: 769 MKSLKKLRLRNTAIKDLPDSIGDLKSLEFLDLSDCSKFEKFPEKG-GNMKRLRELHLKIT 827

Query: 669 AVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC-L 727
           A++++P  I+ L  L+ L LS  +                      ++ + L    LC L
Sbjct: 828 AIKDLPTNISRLKKLKRLVLSDCS----------------------DLWEGLISNQLCNL 865

Query: 728 KYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLN 773
           + L++  CKM   + VLP  LE +D   C     L  L L L +LN
Sbjct: 866 QKLNISQCKMAGQILVLPSSLEEIDAYHCTSKEDLSGL-LWLCHLN 910



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 169/371 (45%), Gaps = 37/371 (9%)

Query: 475 TINFSYCVNLIEFPQISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
            I+ SY   LI+  + S    +  L+L G  ++ ++  S+  L  L  L LR C +LK +
Sbjct: 539 VIDLSYSRKLIQMSEFSRMPNLESLFLNGCVSLIDIHPSVGNLKKLTTLSLRSCDKLKNL 598

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
             S   L SL  L L  C   E FP     M+ L++++   T I +LP S  +L  LE+L
Sbjct: 599 PDSIWDLESLEILNLSYCSKFEKFPGKGGNMKSLRKLHLKDTAIKDLPDSIGDLESLEIL 658

Query: 592 FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
            + DCSK +  P+  G+++ L  +L   +AI  LP S+     L SLD S  K  E FP 
Sbjct: 659 DLSDCSKFEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDVSGSK-FEKFPE 717

Query: 652 TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS-----------GNNFES----- 695
                + ++  L + + A++++P  I  L SLE L LS           G N +S     
Sbjct: 718 KG-GNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLR 776

Query: 696 --------LPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM--LQSLPVLP 745
                   LP  I  +  L F+ L D +  +  PE    +K L  +  K+  ++ LP   
Sbjct: 777 LRNTAIKDLPDSIGDLKSLEFLDLSDCSKFEKFPEKGGNMKRLRELHLKITAIKDLPTNI 836

Query: 746 FCLESLD---LTGC-NMLRSLPELPLC-LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNR 800
             L+ L    L+ C ++   L    LC LQ LN+  C M   +  LP  L+ +   +C  
Sbjct: 837 SRLKKLKRLVLSDCSDLWEGLISNQLCNLQKLNISQCKMAGQILVLPSSLEEIDAYHCTS 896

Query: 801 LQSLPEIL-LC 810
            + L  +L LC
Sbjct: 897 KEDLSGLLWLC 907


>gi|297809025|ref|XP_002872396.1| hypothetical protein ARALYDRAFT_489751 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318233|gb|EFH48655.1| hypothetical protein ARALYDRAFT_489751 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 918

 Score =  290 bits (741), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 235/752 (31%), Positives = 372/752 (49%), Gaps = 59/752 (7%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAGG 53
           S  V++VGIWG  GIGKTT+A+A+F++    F+G  F+             R N +    
Sbjct: 196 SQEVRMVGIWGATGIGKTTIARALFNRLYRHFQGRVFIDRAFISKSMDIYSRANPDDYNL 255

Query: 54  LEHLQKQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQ 112
             HLQ++ LS  L +K LE+   N     KER++ MK+L+ +DD+++   L+ L  +   
Sbjct: 256 KLHLQEKFLSKLLDKKNLEI---NHLDAVKERLKNMKVLLFIDDLDDQVVLEALACQTQW 312

Query: 113 FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
           FG GSRI+V T+DK +L  +  +   IY V     + A + FC  AF++N  P      S
Sbjct: 313 FGDGSRIIVITKDKHLLRAYGIDN--IYEVLLPSKDLAIKMFCRSAFRQNSPPNGFIELS 370

Query: 173 RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
             VV      PL L +LGS L  + K  W +++       + +I      L++S++ L  
Sbjct: 371 YEVVQRAGSLPLGLNILGSYLRGRNKEIWMEMMPGFRNKLDGKIEKT---LRVSYDGLDS 427

Query: 233 RV-KSIFLDIACFFEGEDKDFVASILDDSESDVLDILI---DKSLVSIS--GNFLNMHDI 286
           +  ++IF  IAC F  E    +  +L DS  +V + LI   DKSL+ I      + MH +
Sbjct: 428 KDDQAIFRHIACIFNFETCSDIKKLLADSGLNVTNGLINLVDKSLIRIKPKQKTVEMHCL 487

Query: 287 LQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR 346
           LQE GR+IVR +S  +P KR  L D K+I  VL    GT  + GI LD+ +I  ++L   
Sbjct: 488 LQETGREIVRAQSVDDPRKREFLVDGKDIYDVLDDCSGTKKVLGISLDIDEIDELHLHVD 547

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           AF  M NLR  K Y             +T+      K+ LP   +YLP  LR L W  +P
Sbjct: 548 AFKGMRNLRFLKLYT------------NTKISEKEDKLLLPKEFNYLPNTLRLLSWQRFP 595

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS 466
           +R +PS F PK LV+L +  SK+E+ WEG        +   + L  ++  G Q+L+ FP 
Sbjct: 596 MRCMPSEFFPKYLVKLIMTGSKLEKLWEG--------VMPLQCLKTINLFGSQNLKEFPD 647

Query: 467 NLHFVCPVTINFSYCVNLIEFPQISGKVTRL----YLGQSAIEEVPSSIECLTDLEVLDL 522
                   T++  YC++L+E P   G + +L     LG   +E +P+ I  L  L  L L
Sbjct: 648 LSLATSLETLSLGYCLSLVEVPSTIGNLNKLTYLNMLGCHNLETLPADIN-LKSLSHLIL 706

Query: 523 RGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
            GC RLK     F  L + ++ + L  L +E FP  L  +E+L  +        +L    
Sbjct: 707 NGCSRLK----IFPALSTNISELTLNLLAVEKFPSNLH-LENLVYLIIQGMTSVKLWDGV 761

Query: 583 ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSH 642
           + L  L+ + + D   L  +PD   +   L   L    ++ +LPS++   + L  LD S 
Sbjct: 762 KVLTSLKTMDLRDSKNLKEIPDLSMASNLLILNLRECLSLVELPSTIRNLHNLAELDMSG 821

Query: 643 CKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
           C  LE+FP    + L ++  ++++  +  +I  +I+  +++  L LS    E +P  I+ 
Sbjct: 822 CTNLETFPND--VNLQSLKRINLARCSRLKIFPDIS--TNISELDLSQTAIEEVPWWIEN 877

Query: 703 MSQLRFIHLEDFNMLQSLPELPLCLKYLHLID 734
            S+L ++ +   +ML+ +      LK+L  +D
Sbjct: 878 FSKLEYLLMGKCDMLEHVFLNISKLKHLKSVD 909



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 23/213 (10%)

Query: 345 PRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSY------SKVQLPNGLDYLPKKLR 398
           P   TN+S L L          +EK PS    E L Y      + V+L +G+  L     
Sbjct: 716 PALSTNISELTL------NLLAVEKFPSNLHLENLVYLIIQGMTSVKLWDGVKVLTSLKT 769

Query: 399 YLHWDTYPLRTLPSNFKPKNLVELNLR--CSKVEQPWEGEKACVPSSIQNFKYLSALSFK 456
               D+  L+ +P      NL+ LNLR   S VE         +PS+I+N   L+ L   
Sbjct: 770 MDLRDSKNLKEIPDLSMASNLLILNLRECLSLVE---------LPSTIRNLHNLAELDMS 820

Query: 457 GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTD 516
           GC +L +FP++++      IN + C  L  FP IS  ++ L L Q+AIEEVP  IE  + 
Sbjct: 821 GCTNLETFPNDVNLQSLKRINLARCSRLKIFPDISTNISELDLSQTAIEEVPWWIENFSK 880

Query: 517 LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
           LE L +  C  L+ +  +  KL+ L ++    C
Sbjct: 881 LEYLLMGKCDMLEHVFLNISKLKHLKSVDFSDC 913



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 125/298 (41%), Gaps = 57/298 (19%)

Query: 527 RLKRISTSFCKLRSLVTLILLGCLNLEHFPEI--LEKMEHLKRIYSDRTPITELPSSFEN 584
           +L+++      L+ L T+ L G  NL+ FP++     +E L   Y     + E+PS+  N
Sbjct: 617 KLEKLWEGVMPLQCLKTINLFGSQNLKEFPDLSLATSLETLSLGYC--LSLVEVPSTIGN 674

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
           L  L  L +  C  L+ LP +I      + IL   S +   P   ALS  +  L      
Sbjct: 675 LNKLTYLNMLGCHNLETLPADINLKSLSHLILNGCSRLKIFP---ALSTNISEL------ 725

Query: 645 GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
                          + LL     AV + P  + +L +L  L + G     L   +K ++
Sbjct: 726 --------------TLNLL-----AVEKFPSNL-HLENLVYLIIQGMTSVKLWDGVKVLT 765

Query: 705 QLRFIHLEDFNMLQSLPELPLC--LKYLHLIDCKMLQSLPVLPFCLESL---DLTGCNML 759
            L+ + L D   L+ +P+L +   L  L+L +C  L  LP     L +L   D++GC  L
Sbjct: 766 SLKTMDLRDSKNLKEIPDLSMASNLLILNLRECLSLVELPSTIRNLHNLAELDMSGCTNL 825

Query: 760 RSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDAS 817
            + P            D N L+SL  + L         C+RL+  P+I   + ELD S
Sbjct: 826 ETFPN-----------DVN-LQSLKRINLA-------RCSRLKIFPDISTNISELDLS 864


>gi|357499585|ref|XP_003620081.1| Disease resistance-like protein GS4-7 [Medicago truncatula]
 gi|355495096|gb|AES76299.1| Disease resistance-like protein GS4-7 [Medicago truncatula]
          Length = 1076

 Score =  289 bits (740), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 245/764 (32%), Positives = 372/764 (48%), Gaps = 89/764 (11%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S+  VQ++GI+G GG+GKTTLA+A+++  + +F+G CF++++  NS   G LEHLQ++
Sbjct: 184 VGSNGKVQMLGIYGTGGMGKTTLARAVYNSIADQFDGLCFLNEISANSAKYG-LEHLQEK 242

Query: 61  MLS--TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS    L  KL      +P   K+R+ R K+L++LDDV+E+ QL+ L G LD FG GSR
Sbjct: 243 LLSKLVELYVKLGDVNDGVP-IIKQRLHRKKVLLILDDVHELKQLQVLAGGLDWFGPGSR 301

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           ++VTTRDK +L K  G E+  Y +  L   EA E      FK N    + +      V+Y
Sbjct: 302 VIVTTRDKHLL-KSHGIERA-YEIPKLIKREALELLRWNTFKNNKVDSNFDGILYCAVTY 359

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+GS+L  K        L+   RI    I  I  ILK+SF+ L    +++F
Sbjct: 360 ASGLPLALEVVGSNLFGKNIVECKSALYQYERI---PIKKIQAILKVSFDALDEDEQNVF 416

Query: 239 LDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSIS----GNFLNMHDILQEM 290
           LDIAC F G    E +D + +   +S    + +L++KSL+ I+     ++L +H +++++
Sbjct: 417 LDIACCFNGYELKELEDILHAHYGNSMKYQISVLLEKSLIKINQFWETSYLTLHALMEQI 476

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
           G++IVRQES KEPGK SRLW  K+I  VL+ +K    I    L LS +     +P     
Sbjct: 477 GKEIVRQESLKEPGKCSRLWFHKDIIHVLEESKVNILIFMNGLLLSSVCSFFTNPINVYG 536

Query: 351 MSNLRLFKFYVPKF------YEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT 404
            S + +     P        ++ ++L  M   + L         G  Y P  +R L W  
Sbjct: 537 SSKIEIIYLEFPSSEQKVVDWKGDELKKMQNLKTLIVKNGSFSKGPKYFPDSIRVLEWHK 596

Query: 405 YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSF 464
           YP R +PS+  PK        C   E  +   + C   +++ F  +  L+   CQ    F
Sbjct: 597 YPSRFVPSDIFPKK----RSVCKLQESDFSSYELC--GTMKMFVNMRELNLDKCQ----F 646

Query: 465 PSNLHFVCPV----TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVL 520
            + +H V  +      +F  C NLIE                    +  S   L  LE+L
Sbjct: 647 LTRIHDVSNLPNLEIFSFQGCKNLIE--------------------IHRSFGFLNKLEIL 686

Query: 521 DLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPS 580
           +  GC +L R      K  SL  L+L  C +L+ FPEIL +++++  I    T I +LP 
Sbjct: 687 NATGCSKLMRFPP--MKSMSLRELMLSYCESLKTFPEILGEVKNITYITLTDTSIEKLPV 744

Query: 581 SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML----R 636
           SF+NL GL  L ++    L  LP +I  +  L  I A    +S+L      S+M+     
Sbjct: 745 SFQNLTGLSNLKIKGKGML-RLPSSIFRMPNLSDITANGCILSKLDDK--FSSMVFTCPN 801

Query: 637 SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL 696
            +    C   + F                       +P  + + +++EIL LSGN+F  L
Sbjct: 802 DIKLKKCNLSDEF-----------------------LPILVMWSANVEILDLSGNSFTIL 838

Query: 697 PAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           P  IK    L  + L+D   L+ +  +P  LKYL    CK L S
Sbjct: 839 PECIKDCRFLSKLTLDDCKCLREIRGIPPNLKYLSAKCCKSLTS 882



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 30/284 (10%)

Query: 584 NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAA-SAISQLPSSVALSNMLRSLDSSH 642
           NLP LE+   + C  L  +  + G L  L  + A   S + + P   ++S  LR L  S+
Sbjct: 655 NLPNLEIFSFQGCKNLIEIHRSFGFLNKLEILNATGCSKLMRFPPMKSMS--LRELMLSY 712

Query: 643 CKGLESFPRTFLLG-LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIK 701
           C+ L++FP   +LG +  +  + ++D ++ ++P     L+ L  L + G     LP+ I 
Sbjct: 713 CESLKTFPE--ILGEVKNITYITLTDTSIEKLPVSFQNLTGLSNLKIKGKGMLRLPSSIF 770

Query: 702 QMSQLRFI--------HLED--FNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC---L 748
           +M  L  I         L+D   +M+ + P   + LK  +L D    + LP+L      +
Sbjct: 771 RMPNLSDITANGCILSKLDDKFSSMVFTCPN-DIKLKKCNLSD----EFLPILVMWSANV 825

Query: 749 ESLDLTGCNMLRSLPE-LPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLP 805
           E LDL+G N    LPE +  C  L  L L+DC  LR +  +P  L+ L+ + C  L S  
Sbjct: 826 EILDLSG-NSFTILPECIKDCRFLSKLTLDDCKCLREIRGIPPNLKYLSAKCCKSLTSSC 884

Query: 806 EILLCLQELDASVLEK--LSKHSPDLQWAPESLKSAAICFEFTN 847
           + +L  QEL  +   K   S  +   +W         I F F N
Sbjct: 885 KNMLLNQELHEAGDTKFCFSGFAKIPEWFEHQNMGNTISFWFRN 928


>gi|356499338|ref|XP_003518498.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1724

 Score =  289 bits (740), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 256/805 (31%), Positives = 376/805 (46%), Gaps = 133/805 (16%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KT LAKA++D     F+ + F++DVR       GLE LQK +LS    E     G  I  
Sbjct: 229 KTELAKALYDNIVQSFDAASFLADVREKLNKINGLEDLQKTLLSEMREELDTELGSAIKG 288

Query: 80  F--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
               K +++  K+L+VLDDV++  +L++L G  D FG GSRI++TTRDK VL     +  
Sbjct: 289 MFEIKRKLKGKKVLLVLDDVDDKDKLEKLAGGRDWFGSGSRIIITTRDKDVL--IAHQVD 346

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLC-LK 196
            IY++  L+   + E FC  AFK++H        S   +   KG PL L+V+GS L  L 
Sbjct: 347 NIYQMEELDKHHSLELFCWNAFKQSHPKTGFEDVSLRAIYVAKGLPLALKVIGSDLATLD 406

Query: 197 RKS--HWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVA 254
            +S   W   L +  R   +    I D+LK S+++L  + K +FLDIACFF+GE K++V 
Sbjct: 407 EESLEDWKCALEEYER---TPPERILDVLKKSYDRLGSKPKQVFLDIACFFKGEKKEYVE 463

Query: 255 SILDDSESDV--LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           +ILDD  +    +++L+ KSL++I    L MHD++Q+MGR IVRQE    PG+RSRLW  
Sbjct: 464 NILDDIGAITYNINVLVKKSLLTIEDGCLKMHDLIQDMGRVIVRQEEPDNPGERSRLWYY 523

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
           +++  +L  + G++ I+GI LD  + + ++    AF  M  LR+          I +  S
Sbjct: 524 EDVIEILTDDLGSNKIQGIMLDPPQREEVDWSGTAFEKMKRLRIL---------IVRNTS 574

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCS--KVE 430
            S+E +             +LP  LR L W  YP ++ PS F PK +V  N   S   +E
Sbjct: 575 FSSEPE-------------HLPNHLRVLDWIEYPSKSFPSKFYPKKIVVFNFPRSHLTLE 621

Query: 431 QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
           +P+                            + FP      C   ++FSY  ++ E P +
Sbjct: 622 EPF----------------------------KKFP------CLTNMDFSYNQSITEVPDV 647

Query: 491 SG--KVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL 547
           SG   + +L L Q   +  V  S+  L  L  L   GC  L+        L SL  L L 
Sbjct: 648 SGVENLRQLRLDQCKNLTTVHESVGFLKKLAHLSASGCTNLRNFLLKMF-LPSLKVLDLN 706

Query: 548 GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
            C+ LEHFP+I+++M+   +IY   T I E+P S  NL GL  L + +  +L  LP ++ 
Sbjct: 707 LCIMLEHFPDIMKEMKEPLKIYMINTAIKEMPESIGNLTGLVCLDISNSKELKYLPSSVF 766

Query: 608 SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD 667
            L  +  +       SQL  S       +SL S     +    RT  L +   GLL    
Sbjct: 767 MLPNV--VAFKIGGCSQLKKS------FKSLQSPSTANVRPTLRT--LHIENGGLLDEDL 816

Query: 668 YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCL 727
            A+      +     LE+L  S NNF SLPA IK+                       C+
Sbjct: 817 LAI------LNCFPKLEVLIASKNNFVSLPACIKE-----------------------CV 847

Query: 728 KYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELP 787
                               L SLD++ C  L+ +PE    L+ LN+  C  L  + ELP
Sbjct: 848 H-------------------LTSLDVSACWKLQKIPECT-NLRILNVNGCKGLEQISELP 887

Query: 788 LCLQLLTVRNCNRLQSLPEILLCLQ 812
             +Q +  R C  L      +LC Q
Sbjct: 888 SAIQKVDARYCFSLTRETSDMLCFQ 912


>gi|227438175|gb|ACP30577.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1235

 Score =  289 bits (740), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 283/958 (29%), Positives = 437/958 (45%), Gaps = 168/958 (17%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN-----SETAGGLEHL 57
             SD V+++GIWG  GIGKTT+A+  + + S+ F+ S F+ D++ N     S+       L
Sbjct: 263  GSDEVRMIGIWGPPGIGKTTIARVAYSKLSNNFQLSVFMDDLKANYTRLCSDDYSLKLQL 322

Query: 58   QKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
            Q+Q +S   ++K  V    + H      R++  K+L+VLD V++  QL+ +  E   FG 
Sbjct: 323  QQQFMSQITNQKDMV----VSHLGVASNRLKDKKVLVVLDGVDQSVQLEAMAKETWWFGP 378

Query: 116  GSRIVVTTRDKRVLEKFRGEEKK-IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSRI++T +D+++   FR      IY+VN    +EA + FC ++F +    +     +R 
Sbjct: 379  GSRIIITAQDQKL---FRAHGVNLIYKVNFPTDDEALQIFCTYSFGQKSPKDGFEELARE 435

Query: 175  VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
            V       PL L V+GS      K  W   L  L    +S   DI  ILK S++ L    
Sbjct: 436  VTRLAGELPLGLRVMGSYFRGMSKQEWTNSLPRLKTSLDS---DIRSILKFSYDALDDED 492

Query: 235  KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMG 291
            K +FL IACFF  ++   V   L     +V   L++L +KSL+SI    + MH +L+++G
Sbjct: 493  KDLFLHIACFFNSQEIHKVEEHLAKKFLEVRQRLNVLAEKSLISIDSGVITMHSLLEKLG 552

Query: 292  RQIVRQESEKEPGKRSRLWDPKEISRVLKHNK-GTDAIEGIFLDL-SKIKGINLDPRAFT 349
            R+IV ++S  EP  R  LW+  EI  VL  +  G+ ++ GI L   ++ + I +  +AF 
Sbjct: 553  REIVCKQSIHEPRLRQFLWEETEIFEVLTGDTTGSKSVIGIKLKYNTEGEKIEISEKAFE 612

Query: 350  NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSK-VQLPNGLDYLPKKLRYLHWDTYPLR 408
             MSNL+  K                      YS  +QL  GL+Y+  KLR+L W  +P+ 
Sbjct: 613  GMSNLQFLKVS-------------------GYSHPLQLTRGLNYISHKLRFLQWTHFPMT 653

Query: 409  TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
             LPS    + LVEL +  SK+E+ WEG K          + L  +     ++L+  P +L
Sbjct: 654  CLPSILNLEFLVELIMHTSKLEKLWEGTKP--------LRCLKWMDLSYSENLKELP-DL 704

Query: 469  HFVCPVTINFSYCVNLIEFPQISGK-VTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCK 526
                 + ++ S C +LI+ P ++G  + +LY+G  S++ E PS IE    L  LDL    
Sbjct: 705  STATNLELDLSNCSSLIKLPYLNGNSLEKLYIGGCSSLVEFPSFIENAVSLRKLDLTSYP 764

Query: 527  RLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLP 586
             L  + +      +L  L L  CL+L                        ELP S  NL 
Sbjct: 765  NLLELPSYVGNATNLDELYLSNCLDL-----------------------VELPLSLGNLQ 801

Query: 587  GLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
             L+ L ++ CSKL+  P   N+ SLE L   LA  S                SLD   C 
Sbjct: 802  KLKKLVLKGCSKLEVFPTNFNVESLEIL--CLAGCS----------------SLDLGGCS 843

Query: 645  GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQM 703
             + + P   +L L ++  L        ++P  I    +L  L LSG +N   LP  I  +
Sbjct: 844  TIGNVPSLRMLNLRSLPQL-------LDLPSFIGNAINLYYLDLSGCSNLVELPVFIGNL 896

Query: 704  SQLRFIHLEDFNMLQSLP-ELPL-CLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNM--- 758
             +L  + LE  + L+ LP  + L  L +L+L DC ML+  P +   +  LDLTG  +   
Sbjct: 897  QKLYMLGLEGCSKLEFLPTNINLESLSWLNLRDCSMLKCFPQISTNIRDLDLTGTAIEQV 956

Query: 759  ---LRSLPELP-LCLQYL-NLED-----------CNMLRSLPELP------LCLQLLTVR 796
               +RS P L  L + Y  NL++           C     + ELP       CL    ++
Sbjct: 957  PPSIRSWPRLEDLTMSYFENLKEFPHALERITELCLTDTDIQELPPWVKQISCLNSFVLK 1016

Query: 797  NCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKAN 856
             C +L S+P I   ++ LDAS  E        L+    S  +      F NC KLN +A 
Sbjct: 1017 GCRKLVSIPPISDSIRFLDASDCES-------LEILECSFHNQISRLNFANCFKLNQEAR 1069

Query: 857  NKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSS 914
            + I+ +S                                VLPG ++P +F+++++G  
Sbjct: 1070 DLIIQNS-----------------------------REAVLPGGQVPAYFTHRATGGG 1098


>gi|15242937|ref|NP_197661.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10178243|dbj|BAB11675.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332005681|gb|AED93064.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1008

 Score =  289 bits (739), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 207/615 (33%), Positives = 313/615 (50%), Gaps = 75/615 (12%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAGGLEH 56
           V++ GIWG  GIGKTT+A+A+F + S  F+GS F+              GN +      H
Sbjct: 205 VRMFGIWGPSGIGKTTIARALFSRISRHFQGSVFLDRAFVSKSMEIYSGGNVDNYNAKLH 264

Query: 57  LQKQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           LQ + LS  L  K ++   N+     ER++ MK+LI +DD+++   L  L  +   FG G
Sbjct: 265 LQGKFLSEILRAK-DIKISNLG-VVGERLKHMKVLIFIDDLDDQVVLDALASKPHWFGCG 322

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEE-AFEHFCNFAFKENHCPEDLNWHSRSV 175
           SRI+V T+DK+    FR     ++   GL  ++ A E F   AF++N  P      +  V
Sbjct: 323 SRIIVITKDKQF---FRAHGIGLFYEVGLPSDKLALEMFSQSAFRQNSPPPGFTELASEV 379

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV- 234
              +   PL L VLGS L  + K  W  +L  L +  + +I  I   L++ +++L+ +  
Sbjct: 380 SKRSGNLPLALNVLGSHLRGRDKEDWIDMLPRLRKGLDGKIEKI---LRVGYDELSNKDD 436

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMG 291
           K+IF  IAC F G +  ++  +L DS   V   L  L+DKSL+ I  + + MH +LQEMG
Sbjct: 437 KAIFRLIACLFNGAEISYIKLLLADSNLGVTIGLKNLVDKSLIRIGCDTVEMHSMLQEMG 496

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IVR++S  EPG+R  L D  +I  VL  N GT  + GI  D+S+I+ +++  RAF  M
Sbjct: 497 REIVREQSIYEPGEREFLVDSTDILDVLNDNTGTKKVLGISFDMSEIEELHIHKRAFKRM 556

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLD-YLPKKLRYLHWDTYPLRTL 410
            NLR  +FY       +KL   S E     +++ L  G D + P KL+ L WD YP+R +
Sbjct: 557 PNLRFLRFY-------KKLGKQSKE-----ARLHLQEGFDKFFPPKLKLLSWDDYPMRRM 604

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEK--AC----------------------------- 439
           PSNF    LV L ++ SK+E+ W+G +   C                             
Sbjct: 605 PSNFHAGYLVVLRMQHSKLEKLWQGVQPLTCLREMQLWGSKKLKEIPDLSLATNLETLYL 664

Query: 440 --------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS 491
                   +PSSI+N   L  L  KGC+ L   P++++      ++   C  L  FP IS
Sbjct: 665 NDCSSLVELPSSIKNLNKLWDLGMKGCEKLELLPTDINLKSLYRLDLGRCSRLKSFPDIS 724

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
             ++ LYL ++AIEEVP  I+  + L+ L +R CK+LK IS +  KL+ L  L    C+ 
Sbjct: 725 SNISELYLNRTAIEEVPWWIQKFSRLKRLRMRECKKLKCISPNISKLKHLEMLDFSNCIA 784

Query: 552 LEHFPEILEKMEHLK 566
                 ++++   LK
Sbjct: 785 TTEEEALVQQQSVLK 799



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 134/299 (44%), Gaps = 45/299 (15%)

Query: 660 MGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQS 719
           + LL   DY +R +P    +   L +L +  +  E L   ++ ++ LR + L     L+ 
Sbjct: 591 LKLLSWDDYPMRRMPSNF-HAGYLVVLRMQHSKLEKLWQGVQPLTCLREMQLWGSKKLKE 649

Query: 720 LPELPLC--LKYLHLIDCKMLQSLPVLPFCLESL---DLTGCNMLRSLPELPLCLQYLNL 774
           +P+L L   L+ L+L DC  L  LP     L  L    + GC  L  LP           
Sbjct: 650 IPDLSLATNLETLYLNDCSSLVELPSSIKNLNKLWDLGMKGCEKLELLPT---------- 699

Query: 775 EDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL--DASVLEKLSKHSPDLQWA 832
            D N L+SL  L L         C+RL+S P+I   + EL  + + +E       ++ W 
Sbjct: 700 -DIN-LKSLYRLDLG-------RCSRLKSFPDISSNISELYLNRTAIE-------EVPWW 743

Query: 833 PESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRG 892
            +   S         C KL      K ++ ++ +++H+ +            E L + + 
Sbjct: 744 IQKF-SRLKRLRMRECKKL------KCISPNISKLKHLEMLDFSNCIATTEEEALVQQQS 796

Query: 893 SL--IVLPGSEIPDWFSNQSSGSSICIQLPPHSS--CRNLIGFAFCAVLDSKKVDSDCF 947
            L  ++ PG ++P +F+ Q++GSS+ I L  H S   + L+GF  C VLD++ + S+ +
Sbjct: 797 VLKYLIFPGGQVPLYFTYQATGSSLAIPLSLHQSSLSQQLLGFRACVVLDAESMSSELY 855


>gi|227438189|gb|ACP30584.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 980

 Score =  289 bits (739), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 281/984 (28%), Positives = 441/984 (44%), Gaps = 157/984 (15%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-----L 57
            SD V+++GIWG  GIGKTT+A+  ++Q S+ F+ S F+ D++ NS      ++     L
Sbjct: 42  GSDEVRMIGIWGPPGIGKTTIARVAYNQLSNSFQLSVFMDDIKANSSRLCSDDYSVKLQL 101

Query: 58  QKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           Q+Q +S     K  V    + H      R++  K+L+VLD V+   QL  +  E   FG 
Sbjct: 102 QQQFMSQITDHKDMV----VSHLGVASNRLKDKKVLVVLDGVDRSIQLDAMAKETWWFGP 157

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           GSRI++TT+D+++L         IY V+    +EA + FC  +F +          +R V
Sbjct: 158 GSRIIITTQDQKLLRAHGINH--IYEVDFPTNDEALQIFCMHSFGQKSPKYGFEELAREV 215

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
              +   PL L V+GS      K  W  VL    R+  S   DI  ILK S++ L    K
Sbjct: 216 TQLSGELPLGLRVMGSYFRGMSKQEWINVLP---RLRTSLYADIRSILKFSYDALDDEDK 272

Query: 236 SIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGR 292
            +FL IACFF  E+   V   L     +V   L++L ++SL+SI    + MH +L+++GR
Sbjct: 273 YLFLHIACFFSYEEIHKVEVYLAKKFVEVRQRLNVLAERSLISIDWGVIRMHSLLEKLGR 332

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLK-HNKGTDAIEGIFLDLSKI-KGINLDPRAFTN 350
           +IV ++S  +PG+R  L+D +EI  +L     G+ ++ GI LD  KI + +++  +AF  
Sbjct: 333 EIVCKQSIHDPGQRQFLYDCREICELLTGEATGSKSVIGIKLDYYKIEEELDVSEKAFDG 392

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           MSNL        +F ++              + +QL  GL+YL  KLR LHW  +P+   
Sbjct: 393 MSNL--------QFLQVNGYG----------APLQLTRGLNYLSHKLRLLHWSHFPMSCF 434

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVP------SSIQNFKYLSALS---------F 455
           P N   + LVEL +  SK+E+ WEG K          S   N K L  LS          
Sbjct: 435 PCNVNLEFLVELIMIGSKLEKLWEGIKPLRSLKWMDLSDSVNLKELPNLSTATNLEKLYL 494

Query: 456 KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL----YLGQSAIEEVPSSI 511
           + C SL   P  L       ++   C +L++FP  +G    L     +    + E+PS +
Sbjct: 495 RNCWSLIKLPC-LPGNSMEELDIGGCSSLVQFPSFTGNAVNLLKLNLVSFPNLVELPSYV 553

Query: 512 ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPE--ILEKMEHLKRIY 569
              T+LE L+L  C  L  +  SF  L+ L TLIL GC  LE+FP    LE +  L    
Sbjct: 554 GNATNLENLNLSNCSHLVELPLSFGNLQKLQTLILKGCSKLENFPNNITLEFLNDLDLAG 613

Query: 570 SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY-YILAAASAISQLPSS 628
                ++   S+  N+  L+ L +    +L  +P  IG+   L   IL+  S + +LP  
Sbjct: 614 CSSLDLSGF-STIVNVVNLQTLNLSSLPQLLEVPSFIGNATNLEDLILSNCSNLVELPLF 672

Query: 629 VALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV-REIPQEIAYLSSLEILY 687
           +     L+ L    C  LE  P    + L ++  L+++D ++ +  P+   Y+ +   LY
Sbjct: 673 IGNLQKLKRLRLEGCSKLEVLPTN--INLESLFELNLNDCSMLKHFPEISTYIRN---LY 727

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC 747
           L G   E +P  I+  S+L  + +  F  L+  P     +  + L D + +Q LP  P+ 
Sbjct: 728 LIGTAIEQVPPSIRSWSRLDELKMSYFENLKGFPHALERITCMCLTDTE-IQELP--PWV 784

Query: 748 -----LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQ 802
                L    L GC  L +LP +   ++Y++  DC  L                      
Sbjct: 785 KKISRLSVFVLKGCRKLVTLPAISESIRYMDASDCKSL---------------------- 822

Query: 803 SLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILAD 862
              EIL C                        S  +  +   F NC KL+ +A N I+ +
Sbjct: 823 ---EILEC------------------------SFHNQYLTLNFANCFKLSQEARNLIIQN 855

Query: 863 SLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSS-ICIQLPP 921
           S                                VLPG ++P  F+++++G+  + I+L  
Sbjct: 856 SC----------------------------RYAVLPGGQVPPHFTHRATGAGPLTIKLNE 887

Query: 922 HSSCRNLIGFAFCAVLDSKKVDSD 945
               + +I F  C +L   KVD D
Sbjct: 888 KPLPKYMI-FKACILL-VYKVDHD 909


>gi|356553715|ref|XP_003545198.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1127

 Score =  289 bits (739), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 251/802 (31%), Positives = 391/802 (48%), Gaps = 105/802 (13%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVA----GP 75
           KTTLA+ +F +  ++F+ SCF+ +VR  S+ + G+  LQ ++LS    + L++     G 
Sbjct: 229 KTTLARVVFKKIRNKFDISCFLENVREISQNSDGMLSLQGKLLSHMKMKDLKIQNLDEGK 288

Query: 76  NIPHFTKERVRRMKLLIVLDDVNEVGQLKRL-IGELDQFGQGSRIVVTTRDKRVLEKFRG 134
           +I       +    +L+VLDDVN++ QL+   + +    G GSRI++ TRD  VL     
Sbjct: 289 SI---IGGILFNNNVLLVLDDVNDIRQLENFSVNDQKWLGPGSRIIIITRDMEVLRSHGT 345

Query: 135 EEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLC 194
            E   Y+++ L  +E+ + F   AFK +   E +   S+  V    G PL +E++GSS C
Sbjct: 346 VES--YKIDLLNSDESLQLFSQKAFKRDQPLEHILQLSKVAVQQAGGLPLAIEMMGSSFC 403

Query: 195 LKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVA 254
            + +S W + L ++    + ++  + D L IS++ L P  K +FLDIACFF G  K+ V 
Sbjct: 404 GRSESQWKEFL-EVKEYTKKDV--VMDKLIISYDGLPPSYKILFLDIACFFNGWVKEHVT 460

Query: 255 SIL---DDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
            IL       ++ +D+LIDKSL +  G+ L MHD+LQEMGR+IV +E   + GKRSRLW 
Sbjct: 461 QILTICGRYPANGIDVLIDKSLATYDGSRLWMHDLLQEMGRKIVVEECPIDAGKRSRLWS 520

Query: 312 PKEISRVLKHNKGTDAIEGIFLDLS-KIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
           P++  + LK NK  + I+GI L  S +    N DP AF+ M NL   KF V         
Sbjct: 521 PQDTDQALKRNKENELIQGIVLQSSTQPYNANWDPEAFSKMYNL---KFLV--------- 568

Query: 371 PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
                   ++Y  +Q+P G+  L   +++L W    L+ LP   K + LVEL +R SK++
Sbjct: 569 --------INYHNIQVPRGIKCLCSSMKFLQWTGCTLKALPLGVKLEELVELKMRYSKIK 620

Query: 431 QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
           + W G         Q+F  L  +     + L   P      C   +    C+NL+E  Q 
Sbjct: 621 KIWSGS--------QHFAKLKFIDLSHSEDLIESPIVSGVPCLEILLLEGCINLVEVHQS 672

Query: 491 SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
            G+  +L L                    L+L+GC  L+ + T F ++ SL  LIL GC 
Sbjct: 673 VGQHKKLVL--------------------LNLKGCINLQTLPTKF-EMDSLEELILSGCS 711

Query: 551 NLEHFPEILEKMEHLKRIYSDRTP-ITELPSSFENLPGLEVLFVEDCSKLDNLPDNI--- 606
            ++  P   + M+HL  +  ++   +  LP S  NL  L  L +  CSK   LP+++   
Sbjct: 712 KVKKLPNFGKNMQHLSLVNLEKCKNLLWLPKSIWNLKSLRKLSICGCSKFSTLPNSMNEN 771

Query: 607 GSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLH-- 664
           GSLE L     + + I ++ SS      L+ L         SF     L  +++  LH  
Sbjct: 772 GSLEELD---VSGTPIREITSSKVCLENLKEL---------SFGGRNELASNSLWNLHQR 819

Query: 665 ISDYAVREIPQE-----IAYLSSLEILYLS--GNNFESLPAIIKQMSQLRFIHLEDFNML 717
           IS +  +++P+E     ++ L+SL+ L LS    N ES+P  +  +  L  ++L   N +
Sbjct: 820 ISMHRRQQVPKELILPTLSRLTSLKFLNLSYCDLNDESIPDSLGSLLSLLGLNLSGNNFV 879

Query: 718 QSLPELPLCLKYLH------LIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQ- 770
                   C+  LH      LIDC  L+SLP+LP   + L  T    ++ L      L  
Sbjct: 880 SPPTR---CISNLHTLQSLTLIDCPRLESLPMLPPSAQCLGTTNSTQMKPLNSDAYMLWK 936

Query: 771 ----YLNLEDCNMLRSLPELPL 788
               ++N        SLP LPL
Sbjct: 937 IYELHMNQTYFLYTHSLPTLPL 958


>gi|105922395|gb|ABF81414.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1282

 Score =  288 bits (738), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 211/620 (34%), Positives = 306/620 (49%), Gaps = 82/620 (13%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
           KTT+A+ ++D+   +FEGSCF+++VR       G   LQ+Q+LS  L E+  V   +   
Sbjct: 302 KTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGRRRLQEQLLSEILMERASVWDSSRGI 361

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+RDK+V+        +
Sbjct: 362 EMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPGSRIIITSRDKKVVTG--NNNNR 419

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY    L  ++A   F   AFK +H  ED    S+ VV Y  G PL LEV+GS L  +  
Sbjct: 420 IYEAKKLNDDDALMLFSQKAFKNDHPTEDFVELSKQVVGYANGLPLALEVIGSFLYDRSI 479

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             W   ++ +N I +  I    D+L++SF+ L    K IFLDIACF +G   D +  IL 
Sbjct: 480 PEWRGAINRMNEIPDGRI---IDVLRVSFDGLHESDKKIFLDIACFLKGFKIDRITRILQ 536

Query: 259 DSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                    + +LI++SL+S+S + + MH++LQ MG++IVR ES +EPG+RSRLW  +++
Sbjct: 537 SRGFHAGIGIPVLIERSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDV 596

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
              L  N G + IE IF D+  IK    + +AF+ MS LRL K                 
Sbjct: 597 CLALMDNTGKEKIEAIFFDMPGIKEAQWNMKAFSKMSRLRLLKI---------------- 640

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
                   VQL  G + L  KL +L W +YP ++LP+  +   LVEL++  S ++Q W G
Sbjct: 641 ------DNVQLSEGPENLSNKLLFLEWHSYPSKSLPAGLQVDELVELHMANSNLDQLWYG 694

Query: 436 EKAC---------------------------------------VPSSIQNFKYLSALSFK 456
            K+                                        V  S+   K L  ++  
Sbjct: 695 CKSAFNLKVINLSNSLHLTKTPDFTGIPNLESLILEGCTSLSEVHPSLGYHKKLQYVNLM 754

Query: 457 GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIEC 513
            C+S+R  PSNL            C  L +FP I G +     L L  + IEE+ SSI  
Sbjct: 755 DCESVRILPSNLEMESLKVCILDGCSKLEKFPDIVGNMNCLMVLRLDGTGIEELSSSIHH 814

Query: 514 LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI----- 568
           L  LEVL ++ CK LK I +S   L+SL  L L GC   E+ PE L K+E L+       
Sbjct: 815 LIGLEVLSMKTCKNLKSIPSSIGCLKSLKKLDLFGCSEFENIPENLGKVESLEEFDGLSN 874

Query: 569 ----YSDRTPITELPSSFEN 584
               +    P  E+P  F +
Sbjct: 875 PRPGFGIAIPGNEIPGWFNH 894



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 187/413 (45%), Gaps = 71/413 (17%)

Query: 657  LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF--ESLPAIIKQMSQLRFIHLEDF 714
            +S + LL I +  + E P+ +    S ++L+L  +++  +SLPA + Q+ +L  +H+ + 
Sbjct: 632  MSRLRLLKIDNVQLSEGPENL----SNKLLFLEWHSYPSKSLPAGL-QVDELVELHMANS 686

Query: 715  NMLQSLP--ELPLCLKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSL-PELPLC- 768
            N+ Q     +    LK ++L +   L   P       LESL L GC  L  + P L    
Sbjct: 687  NLDQLWYGCKSAFNLKVINLSNSLHLTKTPDFTGIPNLESLILEGCTSLSEVHPSLGYHK 746

Query: 769  -LQYLNLEDCNMLRSLP-ELPL-CLQLLTVRNCNRLQSLPEIL-----LCLQELDASVLE 820
             LQY+NL DC  +R LP  L +  L++  +  C++L+  P+I+     L +  LD + +E
Sbjct: 747  KLQYVNLMDCESVRILPSNLEMESLKVCILDGCSKLEKFPDIVGNMNCLMVLRLDGTGIE 806

Query: 821  KLSK---HSPDLQWAP-------ESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHM 870
            +LS    H   L+          +S+ S+  C +    L L G +  + + ++L ++  +
Sbjct: 807  ELSSSIHHLIGLEVLSMKTCKNLKSIPSSIGCLKSLKKLDLFGCSEFENIPENLGKVESL 866

Query: 871  ----AIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCR 926
                 +++ R G+ +AI              PG+EIP WF++QS GSSI +Q+P  S   
Sbjct: 867  EEFDGLSNPRPGFGIAI--------------PGNEIPGWFNHQSMGSSISVQVPSWS--- 909

Query: 927  NLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDR 986
              +GF  C    +       F +F  + +         E     +  +  YI+ L  SD 
Sbjct: 910  --MGFVACVAFSANGESPSLFCHFKANGR---------ENYPSPMCISCNYIQVL--SDH 956

Query: 987  VILGFKPCLNVGFPDGYHHTIAT---FKFFAERKFYKIKRCGLC---PVYANP 1033
            + L +    ++     + H   +     F + +   K+K CG+C    VY  P
Sbjct: 957  IWLFYLSFDHLKELKEWKHESYSNIELSFHSFQPGVKVKNCGVCLLSSVYITP 1009


>gi|359493227|ref|XP_002264747.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1536

 Score =  288 bits (738), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 206/618 (33%), Positives = 320/618 (51%), Gaps = 62/618 (10%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+AI+++ S++++ S F+ ++R  S+  G    LQ ++L   L EK      NI  
Sbjct: 229 KTTIAEAIYNKISYQYDSSSFLRNIREKSQ--GDTLQLQNELLHDILKEK-GFKISNIDE 285

Query: 80  ---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
                K  +   ++L++LDDV+++ QLK L  + D F   S I++T+RDK+VL ++  + 
Sbjct: 286 GVTMIKRCLNSKRVLVILDDVDDLKQLKHLAQKKDWFNAKSTIIITSRDKQVLTRYGVDT 345

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
              Y V   + +EA E F  +AF+EN   E     S +++ Y  G PL L++LG+SL  K
Sbjct: 346 P--YEVQKFDKKEAIELFSLWAFQENLPKEAYENLSYNMIEYADGLPLALKLLGASLFGK 403

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
           + S W   L+ L RI   EI+ +   L+ISF+ L    K IFLD+ACFF+G+ KDFV+ I
Sbjct: 404 KISEWESALYKLKRIPHMEINKV---LRISFDGLDDMDKEIFLDVACFFKGKSKDFVSRI 460

Query: 257 LDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
           L       +  L DK L++IS N ++MHD++Q+MG++I+RQE   + G+RSR+WD     
Sbjct: 461 LGPHAEYGIATLNDKCLITISKNMMDMHDLIQQMGKEIIRQECLDDLGRRSRIWD----- 515

Query: 317 RVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTE 376
                   +DA + +  ++               M  LRL K +    Y      S   +
Sbjct: 516 --------SDAYDVLTRNM---------------MDRLRLLKIHKDDEYGCISRFSRHLD 552

Query: 377 EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE 436
            +L +S+  LP   ++   +L Y HWD Y L +LP+NF  K+LVEL LR S ++Q W G 
Sbjct: 553 GKL-FSEDHLPRDFEFPSYELTYFHWDGYSLESLPTNFHAKDLVELILRGSNIKQLWRGN 611

Query: 437 KACVPSSIQNFKY---------------LSALSFKGCQSLRSFPSNLH-FVCPVTINFSY 480
           K     ++ N  +               L  L+ KGC  L   P  ++ +    T++   
Sbjct: 612 KLHNKLNVINLSHSVHLTEIPDFSSVPNLEILTLKGCVKLECLPRGIYKWKHLQTLSCGD 671

Query: 481 CVNLIEFPQISG---KVTRLYLGQSAIEEVP--SSIECLTDLEVLDLRGCKRLKRISTSF 535
           C  L  FP+I G   K+  L L  +AIEE+P  SS   L  L++L  RGC +L +I T  
Sbjct: 672 CSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIPTDV 731

Query: 536 CKLRSLVTLILLGCLNLE-HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
           C L SL  L L  C  +E   P  + ++  LK +         +P++   L  L+VL + 
Sbjct: 732 CCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINRLSRLQVLNLS 791

Query: 595 DCSKLDNLPDNIGSLEYL 612
            C  L+++P+   SL  L
Sbjct: 792 HCQNLEHIPELPSSLRLL 809



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/251 (37%), Positives = 143/251 (56%), Gaps = 10/251 (3%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S ++E+P  IE   +L+ L LRGCK LK + +S C+ +SL TL   GC  LE FPEILE 
Sbjct: 1074 SDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILED 1132

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAAS 620
            ME LK++    + I E+PSS + L GL+ L +  C  L NLP++I +L  L  + + +  
Sbjct: 1133 MEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCP 1192

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAVREIPQEIA 678
             + +LP ++     L+SL+  + K  +S    F  L GL ++ +L + +  +REIP  I 
Sbjct: 1193 ELKKLPENLG---RLQSLEILYVKDFDSMNCQFPSLSGLCSLRILRLINCGLREIPSGIC 1249

Query: 679  YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC--- 735
            +L+SL+ L L GN F S+P  I Q+ +L  ++L    +LQ +PE P  L+ L    C   
Sbjct: 1250 HLTSLQCLVLMGNQFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLRTLVAHQCTSL 1309

Query: 736  KMLQSLPVLPF 746
            K+  SL   PF
Sbjct: 1310 KISSSLLWSPF 1320



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 107/212 (50%), Gaps = 6/212 (2%)

Query: 444  IQNFKYLSALSFKGCQSLRSFPSNL-HFVCPVTINFSYCVNLIEFPQISGKV---TRLYL 499
            I+N   L  L  +GC+ L+S PS++  F    T+    C  L  FP+I   +    +L L
Sbjct: 1082 IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDL 1141

Query: 500  GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
            G SAI+E+PSSI+ L  L+ L+L  CK L  +  S C L SL TL +  C  L+  PE L
Sbjct: 1142 GGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENL 1201

Query: 560  EKMEHLKRIY-SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
             +++ L+ +Y  D   +     S   L  L +L + +C  L  +P  I  L  L  ++  
Sbjct: 1202 GRLQSLEILYVKDFDSMNCQFPSLSGLCSLRILRLINCG-LREIPSGICHLTSLQCLVLM 1260

Query: 619  ASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
             +  S +P  ++  + L  L+ SHCK L+  P
Sbjct: 1261 GNQFSSIPDGISQLHKLIVLNLSHCKLLQHIP 1292



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 191/472 (40%), Gaps = 106/472 (22%)

Query: 575  ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
            +  LPSS      L  L  E CS+L++ P+ +  +E L  +    SAI ++PSS+     
Sbjct: 1099 LKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRG 1158

Query: 635  LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY-AVREIPQEIAYLSSLEILYLSGNNF 693
            L+ L+ ++CK L + P + +  L+++  L I     ++++P+ +  L SLEILY+   +F
Sbjct: 1159 LQDLNLAYCKNLVNLPES-ICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYVK--DF 1215

Query: 694  ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDL 753
            +S+      +S L                    L+ L LI+C  L+ +P           
Sbjct: 1216 DSMNCQFPSLSGL------------------CSLRILRLINCG-LREIP----------- 1245

Query: 754  TGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRN---CNRLQSLPEILLC 810
            +G   L SL     CL  +     N   S+P+    L  L V N   C  LQ +PE    
Sbjct: 1246 SGICHLTSLQ----CLVLMG----NQFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSN 1297

Query: 811  LQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHM 870
            L+ L A     L K S  L W+P   KS    F         GK  +  + +S       
Sbjct: 1298 LRTLVAHQCTSL-KISSSLLWSP-FFKSGIQKF------VPRGKVLDTFIPES------- 1342

Query: 871  AIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPH-SSCRNLI 929
                                         + IP+W S+Q  GS I + LP +     + +
Sbjct: 1343 -----------------------------NGIPEWISHQKKGSKITLTLPQNWYENDDFL 1373

Query: 930  GFAFCAV---LDSKKVDSDCFRYFYVSFQFD----LEIKTLSETKHVDLGYNSRYIEDLI 982
            GFA C++   LD +  D D  R F     F+    L ++ +   +H       +   D  
Sbjct: 1374 GFALCSLHVPLDIEWRDIDESRNFICKLNFNNNPSLVVRDIQSRRHC------QSCRDGD 1427

Query: 983  DSDRVIL---GFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGLCPVYA 1031
            +S+++ L         N+   + Y    A+FK   + K  K++RCG   +YA
Sbjct: 1428 ESNQLWLIKIAKSMIPNIYHSNKYRTLNASFKNDFDTKSVKVERCGFQLLYA 1479



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 151/385 (39%), Gaps = 74/385 (19%)

Query: 578 LPSSFENLPGLEVLFVE-DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
           LP  FE  P  E+ +   D   L++LP N  + + +  IL   S I QL     L N L 
Sbjct: 561 LPRDFE-FPSYELTYFHWDGYSLESLPTNFHAKDLVELILRG-SNIKQLWRGNKLHNKLN 618

Query: 637 SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE-IPQEIAYLSSLEILYLSG-NNFE 694
            ++ SH   L   P      +  + +L +      E +P+ I     L+ L     +  +
Sbjct: 619 VINLSHSVHLTEIPD--FSSVPNLEILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLK 676

Query: 695 SLPAIIKQMSQLRFIHLEDFNMLQSLPELP--------LCLKYLHLIDCKMLQSLPVLPF 746
             P I   M +LR + L       ++ ELP          LK L    C  L  +P    
Sbjct: 677 RFPEIKGNMRKLRELDLSG----TAIEELPSSSSFGHLKALKILSFRGCSKLNKIPTDVC 732

Query: 747 CLESL---DLTGCNMLRSLPELPLC----LQYLNLEDCNMLRSLPELP---LCLQLLTVR 796
           CL SL   DL+ CN++       +C    L+ LNL+  N  RS+P        LQ+L + 
Sbjct: 733 CLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKS-NDFRSIPATINRLSRLQVLNLS 791

Query: 797 NCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPES---LKSAAICFEFTNCLKLNG 853
           +C  L+ +PE+   L+ LDA        H P+L  +  S     S   CF  +    LN 
Sbjct: 792 HCQNLEHIPELPSSLRLLDA--------HGPNLTLSTASFLPFHSLVNCFN-SEIQDLNQ 842

Query: 854 KANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPG-SEIPDWFSNQSSG 912
            + N                          N+      G  IVLPG S +P+W   + + 
Sbjct: 843 CSQN-------------------------CNDSAYHGNGICIVLPGHSGVPEWMMGRRA- 876

Query: 913 SSICIQLPPHSSCRN-LIGFAFCAV 936
               I+LP +    N  +GFA C V
Sbjct: 877 ----IELPQNWHQDNEFLGFAICCV 897



 Score = 40.4 bits (93), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 65/140 (46%), Gaps = 37/140 (26%)

Query: 711  LEDFNMLQSLP--ELPLCLKYLHLIDCKMLQSLP--VLPF-CLESLDLTGCNMLRSLPEL 765
             ED +M + LP  E PL L  L L  CK L+SLP  +  F  L +L   GC+ L S PE+
Sbjct: 1071 FEDSDM-KELPIIENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEI 1129

Query: 766  --------------------PLC------LQYLNLEDCNMLRSLPELPLC----LQLLTV 795
                                P        LQ LNL  C  L +LPE  +C    L+ LT+
Sbjct: 1130 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPE-SICNLTSLKTLTI 1188

Query: 796  RNCNRLQSLPEILLCLQELD 815
            ++C  L+ LPE L  LQ L+
Sbjct: 1189 KSCPELKKLPENLGRLQSLE 1208


>gi|357469491|ref|XP_003605030.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506085|gb|AES87227.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1391

 Score =  288 bits (738), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 233/755 (30%), Positives = 358/755 (47%), Gaps = 110/755 (14%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNS-ETAGGLEHLQKQ 60
           +S D V ++ I+G GGIGKTT A  I+ + SH FE + F+++VR  S E+  GLE LQ+ 
Sbjct: 232 NSDDAVCMLEIYGGGGIGKTTFAWNIYSKISHRFEATSFLANVREKSNESTRGLEDLQRT 291

Query: 61  MLSTTLSEKLEVAGPNIP--HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS    E   + G         K ++   ++L++LDDV+ V QL+ L G  D FG GS 
Sbjct: 292 LLSEMGVETQTMIGSTSTGSSVIKCKLSNRRVLLILDDVDSVKQLESLAGGQDWFGSGSI 351

Query: 119 IVVTTRDKRVLEKFRGEEK-KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           ++VTTRD  VL K + + K K Y+   L   E+ E FC +AF  +   E+    S   +S
Sbjct: 352 VIVTTRDIDVLHKHKHDIKIKTYKFEELNHHESTELFCWYAFNMSRPVENFEKISSQAIS 411

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y KG PL L+ +GS+L  K    W   L    ++ ++EI  +   L+IS+N L+   +  
Sbjct: 412 YAKGIPLALKAIGSNLKGKSIEEWDIELQRYRKVPDAEIQGV---LEISYNGLSDLEQKA 468

Query: 238 FLDIACFFEGEDKDFVASILDDSES-DVLDILIDKSLVSISGNF-LNMHDILQEMGRQIV 295
           FLDIACFF+GE  D+V  I +  +   V+ + + K L+++  N  + MHD++Q+MGR+IV
Sbjct: 469 FLDIACFFKGERWDYVKRIQEACDFFPVIRVFVSKCLLTVDENGCIEMHDLIQDMGREIV 528

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGIN-LDPRAFTNMSNL 354
           R+ES   PG+RSRLW   ++  VLK N G+  +EGI L   K + ++     AF  M NL
Sbjct: 529 RKESTSNPGERSRLWSHHDVLGVLKGNLGSTTVEGIMLHPPKQEKVDHWAYNAFQKMKNL 588

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           R+                      L         G  YLP  LR L W  YP +  P +F
Sbjct: 589 RI----------------------LIVRNTLFSFGPSYLPNSLRLLDWKWYPSKNFPPDF 626

Query: 415 KPKNLVEL----------------------------------------NLRCSKVEQ--- 431
            P  +V+                                         NLR   V++   
Sbjct: 627 YPYRMVDFKLPHSSMILKNSFRIFEDLTFINLSHSQSITQIPNLSGAKNLRVLTVDKCHK 686

Query: 432 --PWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
              +E     +P    N  YLSA    GC  L+SF   ++      ++F++C     FPQ
Sbjct: 687 LVRFEKSNGFLP----NLVYLSA---SGCSELKSFVPKMYLPSLQELSFNFCKKFKHFPQ 739

Query: 490 ISGKVT---RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLIL 546
           +  K+    ++++  +AI+E P SI  L  LE +D+  CK L  +S+SF  L  LVTL +
Sbjct: 740 VMQKMDKPLKIHMISTAIKEFPKSIGNLKGLEYMDMSICKGLTELSSSFLLLPKLVTLKI 799

Query: 547 LGC----LNLEHFPE---ILEKMEHLKRIYSDRTPIT--ELPSSFENLPGLEVLFVEDCS 597
            GC    ++   F E   +     +++ ++     ++  ++ +  EN P LE L V   +
Sbjct: 800 DGCSQLGISFRRFKERHSVANGYPNVETLHFSEANLSYEDVNAIIENFPKLEDLKVSH-N 858

Query: 598 KLDNLPDNIGSLEYLYYILAA----ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF 653
               LP+ I    +L  +  +     + I +LPSSV      + +D+ HC+ L     +F
Sbjct: 859 GFVALPNYIRRSLHLKNLDVSFCRNLTEIPELPSSV------QKIDARHCQSLTPEALSF 912

Query: 654 LLGLSAMGLLHIS---DYAVREIPQEIAYLSSLEI 685
           L    +  +  I        REIP+      S EI
Sbjct: 913 LWSKVSQEIQRIQVVMPMPKREIPEWFDCKRSQEI 947


>gi|356514941|ref|XP_003526160.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 913

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 246/742 (33%), Positives = 369/742 (49%), Gaps = 86/742 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           +D V++VGI GMGGIGK+TL +A++++ SH+F   C++ DV    +  G L  +QK++LS
Sbjct: 18  NDDVRVVGITGMGGIGKSTLGRALYERISHQFNSRCYIDDVSKLYQGYGTL-GVQKELLS 76

Query: 64  TTLSEK-LEVAG-PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF-----GQG 116
            +L+EK L++    N      ER+   K LI+LD+V++  QL    G  +       G+G
Sbjct: 77  QSLNEKNLKICNVSNGTLLVWERLSNAKALIILDNVDQDKQLDMFTGGRNDLLGKCLGKG 136

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           S +++ +RD+++L K  G +  IYRV  L   +A   FC  AFK N+   D    +  V+
Sbjct: 137 SIVIIISRDQQIL-KAHGVDV-IYRVEPLNDNDALGLFCKKAFKNNYMMSDFKKLTSDVL 194

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           S+ +G+PL +EVLGSSL  K  SHWG  L  L    E +   I D+L+ISF++L    K 
Sbjct: 195 SHCQGHPLAIEVLGSSLFGKDVSHWGSALVSLR---EKKSKSIMDVLRISFDQLEDTHKE 251

Query: 237 IFLDIACFFEGEDKDFVASILDDSESD---VLDILIDKSLVSISGNFLNMHDILQEMGRQ 293
           IFLDIACFF      +V  +LD    +    L +L+DKSL+++   ++ MH++L ++G+ 
Sbjct: 252 IFLDIACFFNHYPVKYVKEVLDFRGFNPEYGLQVLVDKSLITMDSRWIQMHELLCDLGKY 311

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFL-DLSKIKGINLDPRAFTNMS 352
           IVR++S ++P K SRLWD K+  +V+  NK  D +E IFL + S I            +S
Sbjct: 312 IVREKSPRKPWKWSRLWDFKDFLKVMSDNKAADNVEAIFLIEKSDI---------LRTIS 362

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYS------KVQLPNG-LDYLPKKLRYLHWDTY 405
            +R           ++ L +MS  + L         K+   +G L  L  +L YL W+ Y
Sbjct: 363 TMR-----------VDVLSTMSCLKLLKLDHLDFNVKINFFSGTLVKLSNELGYLRWEKY 411

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
           P   LP +F+P  LVEL L  S ++Q WEG K  +P+       L  L   G ++L   P
Sbjct: 412 PFECLPPSFEPDKLVELILPKSNIKQLWEGTKP-LPN-------LRRLDLSGSKNLIKMP 463

Query: 466 SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
                +   +++   C+ L                    EE+  SI     L  L+LR C
Sbjct: 464 YIGDALYLESLDLEGCIQL--------------------EEIGLSIVLSPKLTSLNLRNC 503

Query: 526 KRLKRISTSFCKLRSLVTLILLGCLNLEHF-PEILEKMEHLKRIYSDRTPITELPSSFEN 584
           K L ++   F +   L  L+L GC  L H  P I    +  +    +   +  LP+S   
Sbjct: 504 KSLIKL-PQFGEDLILEKLLLGGCQKLRHIDPSIGLLKKLRRLNLKNCKNLVSLPNSILG 562

Query: 585 LPGLEVLFVEDCSKLDN--LPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSH 642
           L  LE L +  CSKL N  L   +   E L  I    + I    S+ + S   +   S  
Sbjct: 563 LNSLEDLNLSGCSKLYNTELLYELRDAEQLKKIDIDGAPI-HFQSTSSYSREHKKSVSCL 621

Query: 643 CKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
                 FP    L LS   L+ I D         I  +  L+ L LSGNNF +LP  +K+
Sbjct: 622 MPSSPIFPCMRELDLSFCNLVEIPD--------AIGIMCCLQRLDLSGNNFATLPN-LKK 672

Query: 703 MSQLRFIHLEDFNMLQSLPELP 724
           +S+L  + L+    L+SLPELP
Sbjct: 673 LSKLVCLKLQHCKQLKSLPELP 694



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 185/450 (41%), Gaps = 88/450 (19%)

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
           K+  L L +S I+++    + L +L  LDL G K L ++      L  L +L L GC+ L
Sbjct: 424 KLVELILPKSNIKQLWEGTKPLPNLRRLDLSGSKNLIKMPYIGDALY-LESLDLEGCIQL 482

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           E                       E+  S    P L  L + +C  L  LP     L   
Sbjct: 483 E-----------------------EIGLSIVLSPKLTSLNLRNCKSLIKLPQFGEDLILE 519

Query: 613 YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
             +L     +  +  S+ L   LR L+  +CK L S P + +LGL+++  L++S      
Sbjct: 520 KLLLGGCQKLRHIDPSIGLLKKLRRLNLKNCKNLVSLPNS-ILGLNSLEDLNLSG----- 573

Query: 673 IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
                + L + E+LY    + E L  I    + + F     ++            ++   
Sbjct: 574 ----CSKLYNTELLY-ELRDAEQLKKIDIDGAPIHFQSTSSYSR-----------EHKKS 617

Query: 733 IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE---LPLCLQYLNLEDCNMLRSLPELPLC 789
           + C ++ S P+ P C+  LDL+ CN++  +P+   +  CLQ L+L   N   +LP L   
Sbjct: 618 VSC-LMPSSPIFP-CMRELDLSFCNLVE-IPDAIGIMCCLQRLDLSG-NNFATLPNLKKL 673

Query: 790 LQL--LTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTN 847
            +L  L +++C +L+SLPE+                   P   +  + L+ A +     N
Sbjct: 674 SKLVCLKLQHCKQLKSLPEL-------------------PSRIYNFDRLRQAGL--YIFN 712

Query: 848 CLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFS 907
           C +L  +           R   MA +      ++        + G   V PGSEIP WF+
Sbjct: 713 CPELVDRE----------RCTDMAFSWTMQSCQVLYIYPFCHVSGG--VSPGSEIPRWFN 760

Query: 908 NQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
           N+  G+ + +   P     N IG AFCA+ 
Sbjct: 761 NEHEGNCVSLDACPVMHDHNWIGVAFCAIF 790


>gi|357468483|ref|XP_003604526.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505581|gb|AES86723.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 983

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 242/668 (36%), Positives = 344/668 (51%), Gaps = 85/668 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ V+++GIWGMGGIGKTT+A+ IF Q   +++G CF+  V    +  GG+  L++ +LS
Sbjct: 27  SEQVRVIGIWGMGGIGKTTIAEEIFSQNRSDYDGCCFLEKVSERLKAHGGVGCLKESLLS 86

Query: 64  TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
             L E ++    +I    K R+ RMK+LIVLDDV E  QL+ L G LD F   SRI++T+
Sbjct: 87  ELLKESVKELSGDI----KRRISRMKVLIVLDDVKETDQLEMLFGTLDWFQSDSRIILTS 142

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           RDK+VL     +   +Y V  L+  EA E F   AFK++H   +    S+ V+ Y KG P
Sbjct: 143 RDKQVLRTNEVDHDGLYEVRVLDSSEALELFNLNAFKQSHPEMEYYELSKRVIEYAKGVP 202

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           LVL+VL   L  K K  W   L  L R+   ++H   D++K+S++ L    K  FLDIAC
Sbjct: 203 LVLKVLAHMLRGKNKEVWESQLDKLKRLPVQKVH---DVVKLSYDDLDRLEKKYFLDIAC 259

Query: 244 FFEGED--KDFVASILDDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEMGRQIV 295
           FF G +   D++  +L D +SD      L+ L DK+L++IS  N ++MHDILQEMGR++V
Sbjct: 260 FFNGLNLKVDYMKHLLKDCDSDNYVAGGLESLKDKALITISEDNVISMHDILQEMGREVV 319

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           RQES + P KRSRLWD  +I  VLK++KG+DAI  I ++  + + + L P  F  M+NL+
Sbjct: 320 RQESREHPEKRSRLWDVDDICDVLKNDKGSDAIRSIRVNFLENRKLKLSPHVFDKMTNLQ 379

Query: 356 LFKF--YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
              F  Y   + ++                   P GL+  P  LRYLHW  YPL++    
Sbjct: 380 FLDFWGYFDDYLDL------------------FPQGLESFPTGLRYLHWIDYPLKSFSEK 421

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           F  +NLV L+L   ++E+ W G    V  ++ N K ++ +    C S             
Sbjct: 422 FFAENLVILDLYLGRMEKLWCG----VQQNLVNLKEVTII----CASF------------ 461

Query: 474 VTINFSYCVNLIEFPQISGKVTRLYLGQSA---IEEVPSSIECLTDLEVLDLRGCKRLKR 530
                     L E P  S       L  +A   +E V  SI  L  L  LDL  C  L  
Sbjct: 462 ----------LKELPDFSKATNLKVLSVTACDNLESVHPSIFTLEKLVHLDLSSCVSLTT 511

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
             TS   L SL  L L  CL L  F   LE +  L        PI  LPSSF     LE 
Sbjct: 512 F-TSNSNLSSLHYLDLSNCLKLSEFSVTLENIVELDL---SGCPINALPSSFGCQSNLET 567

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYILAAAS----AISQLPSSVALSNMLRSLDSSHCKGL 646
           L + D ++++++  +I +L  L  +    S     + +LPSSV       SL   +C+ L
Sbjct: 568 LNLSD-TEIESIHSSIKNLTRLRKLYIRFSNKLLVLPELPSSV------ESLLVDNCESL 620

Query: 647 ES--FPRT 652
           ++  FP T
Sbjct: 621 KTVLFPST 628



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 90/168 (53%), Gaps = 7/168 (4%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSN 633
           + ELP  F     L+VL V  C  L+++  +I +LE L ++ L++  +++   S+  LS+
Sbjct: 462 LKELPD-FSKATNLKVLSVTACDNLESVHPSIFTLEKLVHLDLSSCVSLTTFTSNSNLSS 520

Query: 634 MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF 693
            L  LD S+C  L  F  T    L  +  L +S   +  +P      S+LE L LS    
Sbjct: 521 -LHYLDLSNCLKLSEFSVT----LENIVELDLSGCPINALPSSFGCQSNLETLNLSDTEI 575

Query: 694 ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           ES+ + IK +++LR +++   N L  LPELP  ++ L + +C+ L+++
Sbjct: 576 ESIHSSIKNLTRLRKLYIRFSNKLLVLPELPSSVESLLVDNCESLKTV 623



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 132/310 (42%), Gaps = 66/310 (21%)

Query: 670 VREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL--- 725
           ++E+P + +  ++L++L ++  +N ES+   I  + +L  +HL D +   SL        
Sbjct: 462 LKELP-DFSKATNLKVLSVTACDNLESVHPSIFTLEKL--VHL-DLSSCVSLTTFTSNSN 517

Query: 726 --CLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC---LQYLNLEDC--- 777
              L YL L +C  L    V    +  LDL+GC  + +LP    C   L+ LNL D    
Sbjct: 518 LSSLHYLDLSNCLKLSEFSVTLENIVELDLSGCP-INALPSSFGCQSNLETLNLSDTEIE 576

Query: 778 --------------------NMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDAS 817
                               N L  LPELP  ++ L V NC   +SL  +L       ++
Sbjct: 577 SIHSSIKNLTRLRKLYIRFSNKLLVLPELPSSVESLLVDNC---ESLKTVL-----FPST 628

Query: 818 VLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKI---LADSLLRIRHMAIAS 874
           V E+  ++   +              EF NC  L+  +   I   L  +L++  H  +++
Sbjct: 629 VAEQFKENKKRV--------------EFWNCFNLDELSLINIGLNLQINLMKFTHQHLST 674

Query: 875 LRLG--YEMAINEKLS-ELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGF 931
           L      E  ++ K + +   ++ V PGS +P W   +++   + + L P      L+GF
Sbjct: 675 LEHDEYAESYVDYKDNFDSYQAVYVYPGSSVPKWLEYKTTMDGMIVDLSPLHL-SPLLGF 733

Query: 932 AFCAVLDSKK 941
            FC +L   K
Sbjct: 734 VFCFILPETK 743


>gi|30694677|ref|NP_199318.2| putative WRKY transcription factor 16 [Arabidopsis thaliana]
 gi|332007812|gb|AED95195.1| putative WRKY transcription factor 16 [Arabidopsis thaliana]
          Length = 1344

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 206/660 (31%), Positives = 324/660 (49%), Gaps = 89/660 (13%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ VGIWGM GIGKTTLAKA+FDQ S EF+  CF+ D     +  G    L++Q L    
Sbjct: 163 IRCVGIWGMPGIGKTTLAKAVFDQMSGEFDAHCFIEDYTKAIQEKGVYCLLEEQFLKENA 222

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
                V   ++    ++R+   ++L+VLDDV     ++  +G  D FG  S I++T++DK
Sbjct: 223 GASGTVTKLSL---LRDRLNNKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITSKDK 279

Query: 127 RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVL 186
            V    R  +  IY V GL  +EA + F   A  ++   ++L+  S  V+ Y  G+PL L
Sbjct: 280 SVFRLCRVNQ--IYEVQGLNEKEALQLFSLCASIDDMAEQNLHEVSMKVIKYANGHPLAL 337

Query: 187 EVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFE 246
            + G  L  K++    ++     + C   I    D +K S++ L  R K+IFLDIACFF+
Sbjct: 338 NLYGRELMGKKRPPEMEIAFLKLKECPPAI--FVDAIKSSYDTLNDREKNIFLDIACFFQ 395

Query: 247 GEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEP 303
           GE+ D+V  +L+         +D+L++KSLV+IS N + MH+++Q++GRQI+ +E+ ++ 
Sbjct: 396 GENVDYVMQLLEGCGFFPHVGIDVLVEKSLVTISENRVRMHNLIQDVGRQIINRET-RQT 454

Query: 304 GKRSRLWDPKEISRVLKHNKGT---------------DAIEGIFLDLSKIKGINLDPRAF 348
            +RSRLW+P  I  +L+  +                 + IEG+FLD S +   ++   AF
Sbjct: 455 KRRSRLWEPCSIKYLLEDKEQNENEEQKTTFERAQVPEEIEGMFLDTSNL-SFDIKHVAF 513

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
            NM NLRLFK Y             S+  ++ +    L   L  LP  LR LHW+ YPL+
Sbjct: 514 DNMLNLRLFKIY-------------SSNPEVHHVNNFLKGSLSSLPNVLRLLHWENYPLQ 560

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKA---------CVPSSIQNF------KYLSAL 453
            LP NF P +LVE+N+  S++++ W G K          C    + +       + L  +
Sbjct: 561 FLPQNFDPIHLVEINMPYSQLKKLWGGTKDLEMLKTIRLCHSQQLVDIDDLLKAQNLEVV 620

Query: 454 SFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIEC 513
             +GC  L+SFP+    +    +N S C  +  FP+I   +  L L  + +         
Sbjct: 621 DLQGCTRLQSFPATGQLLHLRVVNLSGCTEIKSFPEIPPNIETLNLQGTGV--------- 671

Query: 514 LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT 573
            ++LE  DL+    L +ISTS+     L  L L  C  L   P ++              
Sbjct: 672 -SNLEQSDLKPLTSLMKISTSYQNPGKLSCLELNDCSRLRSLPNMV-------------- 716

Query: 574 PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSN 633
                     NL  L+ L +  CS+L+ +     +L+ LY +  A   + QLP S+   N
Sbjct: 717 ----------NLELLKALDLSGCSELETIQGFPRNLKELYLVGTAVRQVPQLPQSLEFFN 766



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 161/389 (41%), Gaps = 71/389 (18%)

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAIS 623
           L+ ++ +  P+  LP +F+ +  +E+      S+L  L      LE L  I L  +  + 
Sbjct: 549 LRLLHWENYPLQFLPQNFDPIHLVEINM--PYSQLKKLWGGTKDLEMLKTIRLCHSQQLV 606

Query: 624 QLPSSVALSNMLRSLDSSHCKGLESFPRTF-LLGLSAMGLLHISDY-AVREIPQEIAYLS 681
            +   +   N L  +D   C  L+SFP T  LL L  + L   ++  +  EIP  I    
Sbjct: 607 DIDDLLKAQN-LEVVDLQGCTRLQSFPATGQLLHLRVVNLSGCTEIKSFPEIPPNI---- 661

Query: 682 SLEILYLSGNNFESL-PAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
             E L L G    +L  + +K ++ L  I     N        P  L  L L DC  L+S
Sbjct: 662 --ETLNLQGTGVSNLEQSDLKPLTSLMKISTSYQN--------PGKLSCLELNDCSRLRS 711

Query: 741 LPVLPFC--LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNC 798
           LP +     L++LDL+GC+ L ++   P  L+ L L     +R +P+LP  L+      C
Sbjct: 712 LPNMVNLELLKALDLSGCSELETIQGFPRNLKELYLVG-TAVRQVPQLPQSLEFFNAHGC 770

Query: 799 NRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNK 858
             L+S+         LD    +KL  H                 + F+NC  L+ +  N 
Sbjct: 771 VSLKSI--------RLD---FKKLPVH-----------------YTFSNCFDLSPQVVND 802

Query: 859 ILADSLLRI--RHMAIASLRLGYEMAINEKLS-----ELRGSLIVLPGSEIPDWFSNQSS 911
            L  ++  +  +H+       G+     ++ S     EL  +L     S      +NQ+S
Sbjct: 803 FLVQAMANVIAKHIPRERHVTGFSQKTVQRSSRDSQQELNKTLAF---SFCAPSHANQNS 859

Query: 912 ------GSSICIQLPPHSSCRN-LIGFAF 933
                 GSS   +L P  S RN L+GFA 
Sbjct: 860 KLDLQPGSSSMTRLDP--SWRNTLVGFAM 886



 Score = 46.2 bits (108), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 5/86 (5%)

Query: 221  DILKISFNKLTPRVKSIFLDIACFFEGEDKDFVA----SILDDSESDVLDILIDKSLVSI 276
            ++L++ +  L    K++FL IA  F  ED   VA    +I+D   S  L +L  +SL+ +
Sbjct: 1021 EVLRVRYAGLQEIYKALFLYIAGLFNDEDVGLVAPLIANIIDMDVSYGLKVLAYRSLIRV 1080

Query: 277  SGNF-LNMHDILQEMGRQIVRQESEK 301
            S N  + MH +L++MG++I+  ES+K
Sbjct: 1081 SSNGEIVMHYLLRQMGKEILHTESKK 1106


>gi|227438181|gb|ACP30580.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1275

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 212/695 (30%), Positives = 359/695 (51%), Gaps = 74/695 (10%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG--GLEHLQ 58
           +D  +T + +G+ GM GIGKTTLA+ +++ +  +F     + D+R  S+  G   L  L 
Sbjct: 225 LDCQET-RYLGVVGMPGIGKTTLARELYETWQCKFVSHVLIQDIRRTSKELGLDCLPALL 283

Query: 59  KQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            + L    +  ++ +      +  E ++  K+L+VLDDV++  Q++ L+G  D   QGSR
Sbjct: 284 LEELLGVRNSDVKSSQGAYESYKSELLKH-KVLVVLDDVSDRKQIEVLLGSCDWIRQGSR 342

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKEN---HCPEDLNWHSRSV 175
           IV++T DK +++         Y V  L  ++   HF  +AF  +   H  E +   S+  
Sbjct: 343 IVISTSDKSLIQDVV---DYTYVVPQLNHKDGLGHFGRYAFDHHSSKHNNEVIMKLSKEF 399

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           V Y +G+PL L++LG+ L  K + +W  +L  L+   +S    I D+L+ S+N+L+   K
Sbjct: 400 VHYVRGHPLALKLLGADLNGKDEGYWKTILATLS---QSSCPCIRDVLEESYNELSQEHK 456

Query: 236 SIFLDIACFFEGEDKDFVASILDDSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQI 294
            IFLD+AC F  ED+ +VAS+LD SE+   +  LI+K ++ +S   + MHD+L    ++I
Sbjct: 457 EIFLDMAC-FRREDESYVASLLDTSEAAREIKTLINKFMIDVSDGRVEMHDLLYTFAKEI 515

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSN 353
            R+   ++     RLW  ++I  VLK+ +  + + GIFL+++++K  ++LD   F  M  
Sbjct: 516 CRRAHAQDGKGGHRLWHHQDIIDVLKNIEEGEKVRGIFLNMNEMKREMSLDSCTFEPMLG 575

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LR  K Y           S   E+    +K+ LP+GL++  +++RYLHW  +PL+ LP +
Sbjct: 576 LRYLKIY----------SSGCPEQCRPNNKINLPDGLNFPVEEVRYLHWLEFPLKELPPD 625

Query: 414 FKPKNLVELNLRCSKVEQPWEGEK----------------------------------AC 439
           F P+NLV+L L  SK+E+ W  +K                                   C
Sbjct: 626 FNPRNLVDLKLPYSKIERIWSDDKDTSKLKWVNLNHSSNLRVLSGLSKAQNLQRLNLEGC 685

Query: 440 -----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
                +P  +Q+ + L  L+  GC SL S P  +  V   T+  S C NL EF  IS  +
Sbjct: 686 TKMETLPHDMQHMRSLLVLNLNGCTSLNSLPE-ISLVSLETLILSNCSNLKEFRVISQNL 744

Query: 495 TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
             LYL  ++++++P  I+ L  L +L+++GC +LK        L++L  LIL  C  L+ 
Sbjct: 745 EALYLDGTSVKKLPLDIKILKRLALLNMKGCTKLKEFPDCLDDLKALKELILSDCSKLQQ 804

Query: 555 FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
           FP   E ++ L+ +  D T +TE+P     +  L+ L +    ++ +LPDNI  L  L +
Sbjct: 805 FPANGESIKVLETLRLDATGLTEIP----KISSLQCLCLSKNDQIISLPDNISQLYQLKW 860

Query: 615 I-LAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
           + L    +++ +P    L   L+  D+  C  L++
Sbjct: 861 LDLKYCKSLTSIPK---LPPNLQHFDAHGCCSLKT 892



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 197/462 (42%), Gaps = 77/462 (16%)

Query: 565  LKRIYSDRTPITELP-------------SSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
            ++RI+SD    ++L              S       L+ L +E C+K++ LP ++  +  
Sbjct: 641  IERIWSDDKDTSKLKWVNLNHSSNLRVLSGLSKAQNLQRLNLEGCTKMETLPHDMQHMRS 700

Query: 612  LYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV 670
            L  + L   ++++ LP    +S  L +L  S+C  L+ F R     L A   L++   +V
Sbjct: 701  LLVLNLNGCTSLNSLPEISLVS--LETLILSNCSNLKEF-RVISQNLEA---LYLDGTSV 754

Query: 671  REIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY 729
            +++P +I  L  L +L + G    +  P  +  +  L+ + L D + LQ  P     +K 
Sbjct: 755  KKLPLDIKILKRLALLNMKGCTKLKEFPDCLDDLKALKELILSDCSKLQQFPANGESIKV 814

Query: 730  LHLI--DCKMLQSLPVLPFCLESLDLTGCNMLRSLPE---LPLCLQYLNLEDCNMLRSLP 784
            L  +  D   L  +P +   L+ L L+  + + SLP+       L++L+L+ C  L S+P
Sbjct: 815  LETLRLDATGLTEIPKIS-SLQCLCLSKNDQIISLPDNISQLYQLKWLDLKYCKSLTSIP 873

Query: 785  ELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC-- 842
            +LP  LQ      C  L+++   L CL                          +  IC  
Sbjct: 874  KLPPNLQHFDAHGCCSLKTVSNPLACLT------------------------TTQQICST 909

Query: 843  FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSL-IVLPGSE 901
            F FT+C KL   A   I + +  + + ++ A      +   N  +S+L        PGSE
Sbjct: 910  FIFTSCNKLEMSAKKDISSFAQRKCQLLSDA------QNCCN--VSDLEPLFSTCFPGSE 961

Query: 902  IPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLD--SKKVDSDCFRYFYVSFQFDLE 959
            +P W  +++ G  + +++PPH     L G A CAV+   + +V   CF    V     +E
Sbjct: 962  LPSWLGHEAVGCMLELRMPPHWRENKLAGLALCAVVSFPNSQVQMKCFS---VKCTLKIE 1018

Query: 960  IKTLSETKHVDLGY-------NSRYIEDLIDSDRVILGFKPC 994
            +K   E   +D  +           +E+    + + +G+  C
Sbjct: 1019 VK---EGSWIDFSFPVGSLRNQDNVVENTASPEHIFIGYISC 1057


>gi|105922648|gb|ABF81428.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1246

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 213/617 (34%), Positives = 312/617 (50%), Gaps = 76/617 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
           KTT+A+ ++D+F  +FEGSCF+++VR       G   LQ+Q+LS  L E+  V   +   
Sbjct: 280 KTTVARVVYDRFRLQFEGSCFLANVREVFAEKDGPCRLQEQLLSEILMERASVWDSSRGI 339

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+RDK+VL   R    +
Sbjct: 340 EMIKRRLRLKKILLILDDVDDKEQLEFLAEERGWFGPGSRIIITSRDKQVLT--RNGVAR 397

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV+GS L  +  
Sbjct: 398 IYEGEKLNDDDALMLFSQKAFKNDQPAEDFLDLSKQVVGYASGLPLALEVIGSFLHGRSI 457

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             W   ++ +N I + EI     +L +SF+ L    K IFLDIACF +G   D +  ILD
Sbjct: 458 PEWRGAINRMNEIPDREI---IKVLLVSFDGLHELEKKIFLDIACFLKGFKIDRITRILD 514

Query: 259 DS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                 S  + +LI++SL+S+S + + MH++LQ+MG++I+R+ES +EPG+RSRLW  K++
Sbjct: 515 GRGFHASIGIPVLIERSLISVSRDQVWMHNLLQKMGKEIIRRESPEEPGRRSRLWTYKDV 574

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
              L  N G + +E IFLD+  IK    + +AF+ MS LRL K                 
Sbjct: 575 CLALMDNTGKEKVEAIFLDMPGIKEARWNMKAFSKMSRLRLLKI---------------- 618

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
                   VQL  G + L   LR+L W +YP ++LP+  +   LVEL++  S +EQ W G
Sbjct: 619 ------DNVQLFEGPEDLSNNLRFLEWHSYPSKSLPAGLQVDELVELHMANSNLEQLWYG 672

Query: 436 EKACVPSSIQNF---------------------------------------KYLSALSFK 456
            K+ V   I N                                        K L  ++  
Sbjct: 673 CKSAVNLKIINLSNSLNLSQTPDLTGIPNLKSLILEGCTSLSEVHPSLAHHKKLQHVNLV 732

Query: 457 GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIEC 513
            C+S+R  P+NL            C  L +FP I+G +     L L ++ I ++ SSI  
Sbjct: 733 NCKSIRILPNNLEMESLEVCTLDGCSKLEKFPDIAGNMNCLMVLRLDETGITKLSSSIHY 792

Query: 514 LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT 573
           L  L +L +  CK LK I +S   L+SL  L L GC  L++ PE L K+E L+       
Sbjct: 793 LIGLGLLSMNNCKNLKSIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDGLSN 852

Query: 574 PITELPSSFENLPGLEV 590
           P T    +   +PG E+
Sbjct: 853 PRTRFGIA---VPGNEI 866



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 55/222 (24%)

Query: 727 LKYLHLIDCKMLQSLP--VLPFCLESLDLTGCNMLRSLPELPL---CLQYLNLEDCNM-- 779
           L++++L++CK ++ LP  +    LE   L GC+ L   P++     CL  L L++  +  
Sbjct: 726 LQHVNLVNCKSIRILPNNLEMESLEVCTLDGCSKLEKFPDIAGNMNCLMVLRLDETGITK 785

Query: 780 LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSA 839
           L S     + L LL++ NC  L+S+P  + CL+ L    L   S    +L++ PE+L   
Sbjct: 786 LSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCLKSLKKLDLSGCS----ELKYIPENLGKV 841

Query: 840 AICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPG 899
               EF      +G +N +                 R G                I +PG
Sbjct: 842 ESLEEF------DGLSNPRT----------------RFG----------------IAVPG 863

Query: 900 SEIPDWFSNQ-----SSGSSICIQLPPHSSCRNLIGFAFCAV 936
           +EIP WF++Q       GS   I+L  HSS R  +    C V
Sbjct: 864 NEIPGWFNHQKLQEWQHGSFSNIELSFHSS-RTGVKVKNCGV 904


>gi|356545122|ref|XP_003540994.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1045

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 236/751 (31%), Positives = 358/751 (47%), Gaps = 136/751 (18%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + ++D V++VGIWGM G+GKTTL  A+F + S +++  CF+ D+       G     QKQ
Sbjct: 203 LSANDVVRVVGIWGMSGVGKTTLVTALFGKISPQYDARCFIDDLNKYCGDFGATSA-QKQ 261

Query: 61  MLSTTLSE-KLEVAGPNIPHFT---KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           +L   L++  +E+   N+ H T   + R+RR+K LIVLD+V++V QL+ L    +  G+G
Sbjct: 262 LLCQALNQGNMEIH--NLSHGTMLVRTRLRRLKTLIVLDNVDQVEQLENLALHPEYLGEG 319

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++ +++  +L+ +     K+Y V  L+ ++A +  C  AFK +   +     +  V+
Sbjct: 320 SRIIIISKNMHILKNY--GVYKVYNVQLLKKDKALQLLCKKAFKSDDIEKGYEEVTYDVL 377

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            Y  G PL ++VLGS L  +    W   L    R+ E+   DI D+L+ISF+ L    K 
Sbjct: 378 KYVNGLPLAIKVLGSFLFDRDVFEWRSAL---TRMKENPSKDIMDVLRISFDGLETMEKE 434

Query: 237 IFLDIACFF-EGEDKDFVASILDDSE---------SDVLDILIDKSLVSISG-NFLNMHD 285
           IFLDI CFF  G+ +D+    +   +            + +L++KSL+S    + + MHD
Sbjct: 435 IFLDIVCFFLSGQFQDYDRRSIPPEKILGYRGFYPKIGMKVLVEKSLISFDRYSNIQMHD 494

Query: 286 ILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDP 345
           +L+E+G+ IVR+++ K+P K SRLWD K++ +V+  NK    +E I +            
Sbjct: 495 LLKELGKIIVREKAPKQPRKWSRLWDYKDLQKVMIENKEAKNLEAICI------------ 542

Query: 346 RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
                  N +    ++ +  +++ L  M   + L    V     L+YL  +LRYL+WD Y
Sbjct: 543 ------CNEKYQDEFLQQTMKVDALSKMIHLKLLMLKNVNFSGILNYLSNELRYLYWDNY 596

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
           P  ++PS+F P  LVEL L  S ++Q W+  K                            
Sbjct: 597 PFLSMPSSFHPDQLVELILPYSNIKQLWKDTK---------------------------- 628

Query: 466 SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
              H      ++ S+  NLIE P +SG              VP        L  L+L+GC
Sbjct: 629 ---HLPNLKDLDLSHSQNLIEMPDLSG--------------VPH-------LRNLNLQGC 664

Query: 526 KRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL 585
            ++ RI  S   LR L +L L  C+NL           +L  I+               L
Sbjct: 665 TKIVRIDPSIGTLRELDSLNLRNCINL---------FLNLNIIFG--------------L 701

Query: 586 PGLEVLFVEDCSKL--DNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
             L VL +  CSKL  + L       E++  I    S+I    SSV    ML     S  
Sbjct: 702 SSLTVLNLSGCSKLLTNRLLQKPRETEHMEKIDENRSSIQLSTSSVYEMLMLPFYIFSSW 761

Query: 644 KGLES----------FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF 693
           K ++S          FPR F+L LS   LL        +IP  I  L SL IL L GN F
Sbjct: 762 KQVDSLGLLVPYLSRFPRLFVLDLSFCNLL--------QIPDAIGNLHSLVILNLGGNKF 813

Query: 694 ESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
             LP  IKQ+S+LR ++LE    L+ LPELP
Sbjct: 814 VILPNTIKQLSELRSLNLEHCKQLKYLPELP 844



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 164/434 (37%), Gaps = 92/434 (21%)

Query: 537 KLRSLVTLILLGCLNLEH--FPEILEKMEH-LKRIYSDRTPITELPSSF----------- 582
           K+ +L  +I L  L L++  F  IL  + + L+ +Y D  P   +PSSF           
Sbjct: 557 KVDALSKMIHLKLLMLKNVNFSGILNYLSNELRYLYWDNYPFLSMPSSFHPDQLVELILP 616

Query: 583 -----------ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVAL 631
                      ++LP L+ L +     L  +PD  G        L   + I ++  S+  
Sbjct: 617 YSNIKQLWKDTKHLPNLKDLDLSHSQNLIEMPDLSGVPHLRNLNLQGCTKIVRIDPSIGT 676

Query: 632 SNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA------VREIPQEIAYLSSLEI 685
              L SL+  +C  L       + GLS++ +L++S  +      + + P+E  ++  ++ 
Sbjct: 677 LRELDSLNLRNCINL-FLNLNIIFGLSSLTVLNLSGCSKLLTNRLLQKPRETEHMEKID- 734

Query: 686 LYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP 745
                 N  S+      + ++  +    F+  + +  L L + YL           P L 
Sbjct: 735 -----ENRSSIQLSTSSVYEMLMLPFYIFSSWKQVDSLGLLVPYL--------SRFPRLF 781

Query: 746 FCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNC--NRLQS 803
                LDL+ CN+L+                      +P+    L  L + N   N+   
Sbjct: 782 V----LDLSFCNLLQ----------------------IPDAIGNLHSLVILNLGGNKFVI 815

Query: 804 LPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADS 863
           LP  +  L EL +  LE    H   L++ PE              L    K  N      
Sbjct: 816 LPNTIKQLSELRSLNLE----HCKQLKYLPE--------------LPTPKKRKNHKYYGG 857

Query: 864 LLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHS 923
           L       ++ + L Y M   +         IV+PG+EIP WFS Q+ G SI +   P  
Sbjct: 858 LNTFNCPNLSEMELIYRMVHWQSSLSFNRLDIVIPGTEIPRWFSKQNEGDSISMDPSPLM 917

Query: 924 SCRNLIGFAFCAVL 937
              N IG A CA+L
Sbjct: 918 EDPNWIGVACCALL 931


>gi|15237080|ref|NP_192855.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|75100697|sp|O82500.1|Y4117_ARATH RecName: Full=Putative disease resistance protein At4g11170
 gi|3600057|gb|AAC35544.1| similar to several Arabidopsis thaliana disease resistance proteins
           [Arabidopsis thaliana]
 gi|332657580|gb|AEE82980.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1095

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 212/662 (32%), Positives = 331/662 (50%), Gaps = 101/662 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG----GLE-HLQ 58
           S  V+IVGIWG  G+GKTT+A+A+++Q+   F  S F+ +VR +   AG    GL+ HLQ
Sbjct: 202 SQGVRIVGIWGPAGVGKTTIARALYNQYHENFNLSIFMENVRESYGEAGLDDYGLKLHLQ 261

Query: 59  KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           ++ LS  L +K       + H    +ER++  K+LI+LDDV+ + QLK L  E   FG  
Sbjct: 262 QRFLSKLLDQK----DLRVRHLGAIEERLKSQKVLIILDDVDNIEQLKALAKENQWFGNK 317

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRIVVTT++K++L     +   +Y+V     +EA   FC  AFK++   +DL   +    
Sbjct: 318 SRIVVTTQNKQLL--VSHDINHMYQVAYPSKQEALTIFCQHAFKQSSPSDDLKHLAIEFT 375

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           +     PL L VLGS +  K K  W   L  L    + E+  +   LK+ ++ L    K 
Sbjct: 376 TLAGHLPLALRVLGSFMRGKGKEEWEFSLPTLKSRLDGEVEKV---LKVGYDGLHDHEKD 432

Query: 237 IFLDIACFFEGEDKDFVASIL----DDSESDVLDILIDKSLVS-ISGNFLNMHDILQEMG 291
           +FL IAC F G+ ++++  ++    D   S  L +L DKSL+       + MH +L+++G
Sbjct: 433 LFLHIACIFSGQHENYLKQMIIANNDTYVSFGLQVLADKSLIQKFENGRIEMHSLLRQLG 492

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIK-GINLDPRAFTN 350
           +++VR++S  EPGKR  L + KE   VL +N GT  + GI LD+ +IK  + +  + F  
Sbjct: 493 KEVVRKQSIYEPGKRQFLMNAKETCGVLSNNTGTGTVLGISLDMCEIKEELYISEKTFEE 552

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLP-NGLDYLPKKLRYLHWDTYPLRT 409
           M NL   KFY+          S   ++++   K+QLP  GL YLP +LR LHWD YPL  
Sbjct: 553 MRNLVYLKFYM----------SSPIDDKMKV-KLQLPEEGLSYLP-QLRLLHWDAYPLEF 600

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEKAC------------------------------ 439
            PS+F+P+ LVELN+  SK+++ W G +                                
Sbjct: 601 FPSSFRPECLVELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATKLNRLD 660

Query: 440 ---------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
                    +PSSI+N ++L  L    C+ L   P+N++      ++F YC  L  FP+I
Sbjct: 661 LGWCESLVELPSSIKNLQHLILLEMSCCKKLEIIPTNINLPSLEVLHFRYCTRLQTFPEI 720

Query: 491 SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
           S  +  L L  +AI EVP S++  +           ++  I     K++ LV        
Sbjct: 721 STNIRLLNLIGTAITEVPPSVKYWS-----------KIDEICMERAKVKRLV-------- 761

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
              H P +LEK+        +   +  +P   + LP L+++ +  C  + +LP   GS+ 
Sbjct: 762 ---HVPYVLEKL-----CLRENKELETIPRYLKYLPRLQMIDISYCINIISLPKLPGSVS 813

Query: 611 YL 612
            L
Sbjct: 814 AL 815



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 165/406 (40%), Gaps = 81/406 (19%)

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
           LE FP    + E L  +    + + +L S  + L  L  + +     L+ LP+ + + + 
Sbjct: 598 LEFFPSSF-RPECLVELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATKL 656

Query: 612 LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR 671
               L    ++ +LPSS+     L  L+ S CK LE  P    + L ++ +LH       
Sbjct: 657 NRLDLGWCESLVELPSSIKNLQHLILLEMSCCKKLEIIPTN--INLPSLEVLHFRYCTRL 714

Query: 672 EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
           +   EI+  +++ +L L G     +P  +K  S++  I +E    ++ L  +P  L+ L 
Sbjct: 715 QTFPEIS--TNIRLLNLIGTAITEVPPSVKYWSKIDEICMERAK-VKRLVHVPYVLEKLC 771

Query: 732 LIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQ 791
           L + K L+++P                L+ LP L    Q +++  C  + SLP+LP  + 
Sbjct: 772 LRENKELETIP--------------RYLKYLPRL----QMIDISYCINIISLPKLPGSVS 813

Query: 792 LLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKL 851
            LT  NC  LQ L                    H           ++ +I   F NCLKL
Sbjct: 814 ALTAVNCESLQIL--------------------HG--------HFRNKSIHLNFINCLKL 845

Query: 852 NGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSS 911
             +A  KI         H ++   +  Y                VLPG  +P +FS +S+
Sbjct: 846 GQRAQEKI---------HRSVYIHQSSYIAD-------------VLPGEHVPAYFSYRST 883

Query: 912 GSSICIQLPPHSSCRNLIG---FAFCAVLDSKKVDSDCFRYFYVSF 954
           GSSI I    HS+  +L     F  C VL + K    C   FY  F
Sbjct: 884 GSSIMI----HSNKVDLSKFNRFKVCLVLGAGKRFEGCDIKFYKQF 925



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 118/270 (43%), Gaps = 59/270 (21%)

Query: 497 LYLGQSAIEEVPSSI--ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
           L+     +E  PSS   ECL +L +       +LK++ +    LR+L T+ L    NLE 
Sbjct: 591 LHWDAYPLEFFPSSFRPECLVELNM----SHSKLKKLWSGVQPLRNLRTMNLNSSRNLEI 646

Query: 555 FPEILE--KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
            P ++E  K+  L   + +   + ELPSS +NL  L +L +  C KL+ +P NI      
Sbjct: 647 LPNLMEATKLNRLDLGWCE--SLVELPSSIKNLQHLILLEMSCCKKLEIIPTNIN----- 699

Query: 613 YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
                       LPS       L  L   +C  L++FP       + + LL++   A+ E
Sbjct: 700 ------------LPS-------LEVLHFRYCTRLQTFPEIS----TNIRLLNLIGTAITE 736

Query: 673 IPQEIAYLSS--------------------LEILYLSGNN-FESLPAIIKQMSQLRFIHL 711
           +P  + Y S                     LE L L  N   E++P  +K + +L+ I +
Sbjct: 737 VPPSVKYWSKIDEICMERAKVKRLVHVPYVLEKLCLRENKELETIPRYLKYLPRLQMIDI 796

Query: 712 EDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
                + SLP+LP  +  L  ++C+ LQ L
Sbjct: 797 SYCINIISLPKLPGSVSALTAVNCESLQIL 826


>gi|105922450|gb|ABF81417.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1867

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 198/575 (34%), Positives = 302/575 (52%), Gaps = 68/575 (11%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNIP 78
            KTT+A+ ++D+    FEGSCF+++VR       G   LQK++LS  L E+ + +   +  
Sbjct: 1047 KTTVARVLYDRIRRRFEGSCFLANVREAFAEKDGPRSLQKKLLSDILMERDINICDSSTG 1106

Query: 79   -HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
                K++++R+K+L+VLDDVN+  QL+ L  E   FG GSRI++T+RD  VL     ++ 
Sbjct: 1107 IEMIKQKLQRIKILVVLDDVNDRKQLEYLAKEPGWFGPGSRIIITSRDTNVL--IGNDDT 1164

Query: 138  KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
            KIY    L  ++A   F   AFK +   E     S+ VV Y  G PL LEV+GS L  + 
Sbjct: 1165 KIYEAEKLNDDDALMLFSQKAFKNDQPAEGFVELSKQVVDYANGLPLALEVIGSFLYERS 1224

Query: 198  KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
               W   ++ +N I + +I    D+L++SF+ L    K IFLDIACF +G  KD +  IL
Sbjct: 1225 IPEWRGAINRMNEIPDCKI---IDVLRVSFDGLHESDKKIFLDIACFLKGFKKDRITRIL 1281

Query: 258  DDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
            +         + +LI++SL+S+S + + MHD+LQ MG++IVR ES +EPG+RSRLW  ++
Sbjct: 1282 ESRGFHAGIGIPVLIERSLISVSRDQVWMHDLLQIMGKEIVRCESPEEPGRRSRLWTYED 1341

Query: 315  ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
            +   L  N G + IE IFLD+  IK    + +AF+ MS LRL K                
Sbjct: 1342 VCLALMDNTGKEKIEAIFLDMPGIKEAQWNMKAFSKMSRLRLLKI--------------- 1386

Query: 375  TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
                   + +QL  G + L  +LR+L W +YP ++LP+  +   LVEL++  S +EQ W 
Sbjct: 1387 -------NNLQLSKGPEDLSNQLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIEQLWY 1439

Query: 435  GEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG-- 492
            G             Y SA++ K                   IN S  +NL   P ++G  
Sbjct: 1440 G-------------YKSAVNLK------------------IINLSNSLNLSRTPDLTGIP 1468

Query: 493  KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
             +  L L G +++ +V  S+    +L+ ++L  C+ + RI  S  ++ SL    L GC  
Sbjct: 1469 NLESLILEGCTSLSKVHPSLGSHKNLQYVNLVNCESI-RILPSNLEMESLKVFTLDGCSK 1527

Query: 552  LEHFPEILEKMEHLKRIYSDRTPITELP-SSFENL 585
            LE FP++L  M  L  +  D T + E    SF N+
Sbjct: 1528 LEKFPDVLGNMNCLMVLCLDETELKEWQHGSFSNI 1562



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 20/176 (11%)

Query: 657  LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM 716
            +S + LL I++  + + P++++  + L  L       +SLPA + Q+ +L  +H+ + ++
Sbjct: 1378 MSRLRLLKINNLQLSKGPEDLS--NQLRFLEWHSYPSKSLPAGL-QVDELVELHMANSSI 1434

Query: 717  LQSLP--ELPLCLKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSL-PELP--LCL 769
             Q     +  + LK ++L +   L   P L     LESL L GC  L  + P L     L
Sbjct: 1435 EQLWYGYKSAVNLKIINLSNSLNLSRTPDLTGIPNLESLILEGCTSLSKVHPSLGSHKNL 1494

Query: 770  QYLNLEDCNMLRSLP-ELPL-CLQLLTVRNCNRLQSLPEIL--------LCLQELD 815
            QY+NL +C  +R LP  L +  L++ T+  C++L+  P++L        LCL E +
Sbjct: 1495 QYVNLVNCESIRILPSNLEMESLKVFTLDGCSKLEKFPDVLGNMNCLMVLCLDETE 1550


>gi|357468517|ref|XP_003604543.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505598|gb|AES86740.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1131

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 216/607 (35%), Positives = 303/607 (49%), Gaps = 86/607 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG--GLEHLQKQM 61
           S+ V ++GIWGMG IGKTT+A  IF+Q   E+EG CF+  V   SE  G  G   L++++
Sbjct: 279 SEKVSVIGIWGMGSIGKTTIAGEIFNQNCSEYEGCCFLEKV---SEQLGRHGRTFLKEKL 335

Query: 62  LSTTLSEKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            ST L+E +++  PN + ++T  R+ RMK+LIVLDDV E GQL+ L   LD F   SRI+
Sbjct: 336 FSTLLAEDVKIRSPNGLSNYTVRRIGRMKVLIVLDDVKEEGQLEMLFRTLDWFRSDSRII 395

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK+VL     E+  +Y+V  L+  EA E F   AFK++H   +    S+ VV Y K
Sbjct: 396 LTTRDKQVLIANEVEDDDLYQVGVLDSSEALELFNLNAFKQSHLEMEYYDLSKKVVDYAK 455

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PLVLEVL   L  K K  W   L  L R+   +I    D++++S++ L    +  FLD
Sbjct: 456 GIPLVLEVLAHLLRGKDKEEWESQLDKLKRLPNKKIQ---DVMRLSYDDLDRLEQKYFLD 512

Query: 241 IACFFEG--EDKDFVASILDDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEMGR 292
           IACFF G     D +  +L D ESD      L+ L DK+L++IS  N +++ D       
Sbjct: 513 IACFFNGLRLKVDCMKLLLKDFESDNAVAIGLERLKDKALITISEDNVISIED------- 565

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
                     P K S+LWDP  I  VLK++KGTD I  I +DLS I+ + L P  F  M+
Sbjct: 566 ----------PIKCSQLWDPDIIYDVLKNDKGTDVIRSIRVDLSAIRKLKLSPHVFAKMT 615

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NL    F+   + E   L                P G+   P  LRY+ W +YPL++LP 
Sbjct: 616 NLLFLDFHGGNYQECLDL---------------FPRGIQSFPTDLRYISWMSYPLKSLPK 660

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSF-------- 464
            F  +NLV  +L  S+VE+ W G K  V  ++Q F+   + S K    L           
Sbjct: 661 KFSAENLVIFDLSFSQVEKLWYGVKDLV--NLQEFRLFDSRSLKELPDLSKATNLKVLNI 718

Query: 465 ----------PSNLHFVCPVTINFSYCVN---------------LIEFPQIS-GKVTRLY 498
                     PS L     V ++ + C N               L  F +I+  K     
Sbjct: 719 TQAPLLKNVDPSVLSLDNLVELDLTCCDNNLSFLFYHQLKKFKKLRTFSEIAYNKFPGQD 778

Query: 499 LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
           L +S I E+P S    + LE L  +GC R++RI  S      L  + L  C+ L   PE+
Sbjct: 779 LTKSWINELPLSFGSQSTLETLIFKGC-RIERIPPSIKNRTRLRYINLTFCIKLRTIPEL 837

Query: 559 LEKMEHL 565
              +E L
Sbjct: 838 PSSLETL 844



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 41/203 (20%)

Query: 747 CLESLDLTGCNMLRSLPELP--LCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSL 804
            LE+L   GC + R  P +     L+Y+NL  C  LR++PELP  L+ L +  C  L+++
Sbjct: 796 TLETLIFKGCRIERIPPSIKNRTRLRYINLTFCIKLRTIPELPSSLETL-LAECESLKTV 854

Query: 805 PEILLCLQELDASVLEKLSKHSPDLQWAP----ESLKSAAICFEFTNCLKLNGKANNKI- 859
                                     W P    E  K         NCL L+ ++   I 
Sbjct: 855 --------------------------WFPLTASEQFKENKKRVLLWNCLNLDKRSLINIE 888

Query: 860 --LADSLLRIRHMAIASLRLGYEMAINEKLSELRGS---LIVLPGSEIPDWFSNQSSGSS 914
             +  ++++  +  +++L   Y +  N    +  GS     V PGS +P+W + +++   
Sbjct: 889 LNIQINIMKFAYQHLSTLEHNY-VESNVDYKQTFGSYQAFYVYPGSTVPEWLAYKTTQDD 947

Query: 915 ICIQLPPHSSCRNLIGFAFCAVL 937
           + + L P+     L+GF FC +L
Sbjct: 948 MIVDLFPN-HLPPLLGFVFCFIL 969



 Score = 46.2 bits (108), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 45/263 (17%)

Query: 520 LDLRGCKRLKRISTSFCKLRSLVTLILLG-----CLNLEHFPEILEKM-EHLKRIYSDRT 573
           +DL   ++LK     F K+ +L+ L   G     CL+L  FP  ++     L+ I     
Sbjct: 596 VDLSAIRKLKLSPHVFAKMTNLLFLDFHGGNYQECLDL--FPRGIQSFPTDLRYISWMSY 653

Query: 574 PITELPSSF--ENLPGLEVLFVE--------------------DCSKLDNLPDNIGSLEY 611
           P+  LP  F  ENL   ++ F +                    D   L  LPD   +   
Sbjct: 654 PLKSLPKKFSAENLVIFDLSFSQVEKLWYGVKDLVNLQEFRLFDSRSLKELPDLSKATNL 713

Query: 612 LYYILAAASAISQL-PSSVALSNMLRSLDSSHCKGLESFP-----------RTFL-LGLS 658
               +  A  +  + PS ++L N++  LD + C    SF            RTF  +  +
Sbjct: 714 KVLNITQAPLLKNVDPSVLSLDNLV-ELDLTCCDNNLSFLFYHQLKKFKKLRTFSEIAYN 772

Query: 659 AMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
                 ++   + E+P      S+LE L   G   E +P  IK  ++LR+I+L     L+
Sbjct: 773 KFPGQDLTKSWINELPLSFGSQSTLETLIFKGCRIERIPPSIKNRTRLRYINLTFCIKLR 832

Query: 719 SLPELPLCLKYLHLIDCKMLQSL 741
           ++PELP  L+ L L +C+ L+++
Sbjct: 833 TIPELPSSLETL-LAECESLKTV 854


>gi|4850296|emb|CAB43052.1| RPP1-WsA-like disease resistance protein [Arabidopsis thaliana]
 gi|7267816|emb|CAB81218.1| RPP1-WsA-like disease resistance protein [Arabidopsis thaliana]
          Length = 1174

 Score =  288 bits (736), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 212/662 (32%), Positives = 331/662 (50%), Gaps = 101/662 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG----GLE-HLQ 58
           S  V+IVGIWG  G+GKTT+A+A+++Q+   F  S F+ +VR +   AG    GL+ HLQ
Sbjct: 202 SQGVRIVGIWGPAGVGKTTIARALYNQYHENFNLSIFMENVRESYGEAGLDDYGLKLHLQ 261

Query: 59  KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           ++ LS  L +K       + H    +ER++  K+LI+LDDV+ + QLK L  E   FG  
Sbjct: 262 QRFLSKLLDQK----DLRVRHLGAIEERLKSQKVLIILDDVDNIEQLKALAKENQWFGNK 317

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRIVVTT++K++L     +   +Y+V     +EA   FC  AFK++   +DL   +    
Sbjct: 318 SRIVVTTQNKQLL--VSHDINHMYQVAYPSKQEALTIFCQHAFKQSSPSDDLKHLAIEFT 375

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           +     PL L VLGS +  K K  W   L  L    + E+  +   LK+ ++ L    K 
Sbjct: 376 TLAGHLPLALRVLGSFMRGKGKEEWEFSLPTLKSRLDGEVEKV---LKVGYDGLHDHEKD 432

Query: 237 IFLDIACFFEGEDKDFVASIL----DDSESDVLDILIDKSLVS-ISGNFLNMHDILQEMG 291
           +FL IAC F G+ ++++  ++    D   S  L +L DKSL+       + MH +L+++G
Sbjct: 433 LFLHIACIFSGQHENYLKQMIIANNDTYVSFGLQVLADKSLIQKFENGRIEMHSLLRQLG 492

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIK-GINLDPRAFTN 350
           +++VR++S  EPGKR  L + KE   VL +N GT  + GI LD+ +IK  + +  + F  
Sbjct: 493 KEVVRKQSIYEPGKRQFLMNAKETCGVLSNNTGTGTVLGISLDMCEIKEELYISEKTFEE 552

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLP-NGLDYLPKKLRYLHWDTYPLRT 409
           M NL   KFY+          S   ++++   K+QLP  GL YLP +LR LHWD YPL  
Sbjct: 553 MRNLVYLKFYM----------SSPIDDKMKV-KLQLPEEGLSYLP-QLRLLHWDAYPLEF 600

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEKAC------------------------------ 439
            PS+F+P+ LVELN+  SK+++ W G +                                
Sbjct: 601 FPSSFRPECLVELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATKLNRLD 660

Query: 440 ---------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
                    +PSSI+N ++L  L    C+ L   P+N++      ++F YC  L  FP+I
Sbjct: 661 LGWCESLVELPSSIKNLQHLILLEMSCCKKLEIIPTNINLPSLEVLHFRYCTRLQTFPEI 720

Query: 491 SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
           S  +  L L  +AI EVP S++  +           ++  I     K++ LV        
Sbjct: 721 STNIRLLNLIGTAITEVPPSVKYWS-----------KIDEICMERAKVKRLV-------- 761

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
              H P +LEK+        +   +  +P   + LP L+++ +  C  + +LP   GS+ 
Sbjct: 762 ---HVPYVLEKL-----CLRENKELETIPRYLKYLPRLQMIDISYCINIISLPKLPGSVS 813

Query: 611 YL 612
            L
Sbjct: 814 AL 815



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 165/406 (40%), Gaps = 81/406 (19%)

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
           LE FP    + E L  +    + + +L S  + L  L  + +     L+ LP+ + + + 
Sbjct: 598 LEFFPSSF-RPECLVELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATKL 656

Query: 612 LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR 671
               L    ++ +LPSS+     L  L+ S CK LE  P    + L ++ +LH       
Sbjct: 657 NRLDLGWCESLVELPSSIKNLQHLILLEMSCCKKLEIIPTN--INLPSLEVLHFRYCTRL 714

Query: 672 EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
           +   EI+  +++ +L L G     +P  +K  S++  I +E    ++ L  +P  L+ L 
Sbjct: 715 QTFPEIS--TNIRLLNLIGTAITEVPPSVKYWSKIDEICMERAK-VKRLVHVPYVLEKLC 771

Query: 732 LIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQ 791
           L + K L+++P                L+ LP L    Q +++  C  + SLP+LP  + 
Sbjct: 772 LRENKELETIP--------------RYLKYLPRL----QMIDISYCINIISLPKLPGSVS 813

Query: 792 LLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKL 851
            LT  NC  LQ L                    H           ++ +I   F NCLKL
Sbjct: 814 ALTAVNCESLQIL--------------------HG--------HFRNKSIHLNFINCLKL 845

Query: 852 NGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSS 911
             +A  KI         H ++   +  Y                VLPG  +P +FS +S+
Sbjct: 846 GQRAQEKI---------HRSVYIHQSSYIAD-------------VLPGEHVPAYFSYRST 883

Query: 912 GSSICIQLPPHSSCRNLIG---FAFCAVLDSKKVDSDCFRYFYVSF 954
           GSSI I    HS+  +L     F  C VL + K    C   FY  F
Sbjct: 884 GSSIMI----HSNKVDLSKFNRFKVCLVLGAGKRFEGCDIKFYKQF 925



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 118/270 (43%), Gaps = 59/270 (21%)

Query: 497 LYLGQSAIEEVPSSI--ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
           L+     +E  PSS   ECL +L +       +LK++ +    LR+L T+ L    NLE 
Sbjct: 591 LHWDAYPLEFFPSSFRPECLVELNM----SHSKLKKLWSGVQPLRNLRTMNLNSSRNLEI 646

Query: 555 FPEILE--KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
            P ++E  K+  L   + +   + ELPSS +NL  L +L +  C KL+ +P NI      
Sbjct: 647 LPNLMEATKLNRLDLGWCE--SLVELPSSIKNLQHLILLEMSCCKKLEIIPTNI------ 698

Query: 613 YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
                       LPS       L  L   +C  L++FP       + + LL++   A+ E
Sbjct: 699 -----------NLPS-------LEVLHFRYCTRLQTFPEIS----TNIRLLNLIGTAITE 736

Query: 673 IPQEIAYLSS--------------------LEILYLSGNN-FESLPAIIKQMSQLRFIHL 711
           +P  + Y S                     LE L L  N   E++P  +K + +L+ I +
Sbjct: 737 VPPSVKYWSKIDEICMERAKVKRLVHVPYVLEKLCLRENKELETIPRYLKYLPRLQMIDI 796

Query: 712 EDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
                + SLP+LP  +  L  ++C+ LQ L
Sbjct: 797 SYCINIISLPKLPGSVSALTAVNCESLQIL 826


>gi|15242334|ref|NP_199333.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007833|gb|AED95216.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1261

 Score =  288 bits (736), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 219/702 (31%), Positives = 337/702 (48%), Gaps = 73/702 (10%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S +  + +G+ GM GIGKTTLAK +F +    F    F+ DV    E     E L   
Sbjct: 231 LKSENVTRFIGVVGMPGIGKTTLAKRLFSECGKHFLHKMFLDDVSQKPEPFLD-ETLHTD 289

Query: 61  MLSTTLSEKLEVAGPNIPH----FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           +L      K      N       + K +++  K+ +VLD+V +  Q+ +++G  D    G
Sbjct: 290 LLLGLWKSKNNGRDGNRAKLSIDYIKTQLQGKKVFVVLDNVGDKSQIDKILGGCDWIKAG 349

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKEN---HCPE--DLNWH 171
           SRIV+TT  K V++         Y V GL   +A  HF   AF  +   + P   DL   
Sbjct: 350 SRIVITTSSKSVIQGLNS----TYLVPGLSSCDALNHFNYHAFSASDGFYQPSFTDL--- 402

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT 231
           ++  V Y+ G+P VL++L   L  K +S+W +    L+ +  S  + I D+L+I +++L 
Sbjct: 403 AKQFVDYSMGHPSVLKLLARELRSKDESYWKE---KLSALANSPSNTIQDVLRIPYDELK 459

Query: 232 PRVKSIFLDIACFFEGEDKDFVASILDDS-ESDVLDI--LIDKSLVSISGNFLNMHDILQ 288
            + K +FLDIA FF  E++ +V  +L  S  +D  +I  L DK L+ ISG+ + M+D+L 
Sbjct: 460 EQHKIVFLDIAYFFRFENESYVRRLLGSSAHADASEITDLADKFLIDISGDRVEMNDLLY 519

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
                +  Q S +      RL    EI  VL +      + G++LD+ ++K + LD   F
Sbjct: 520 TFAIGLNSQASSENTTSERRLSKHSEIVDVLMNKAEATKVRGVYLDMFEVKEMGLDSDTF 579

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M +LR  KFY    +          E +   SK+  P GL++LP++LRYL+W  YP +
Sbjct: 580 NKMDDLRYLKFYNSHCHR---------ECEAEDSKLNFPEGLEFLPQELRYLNWLKYPEK 630

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEK------------------------------- 437
            LP NF PKNL++L L  S++EQ WE EK                               
Sbjct: 631 NLPINFDPKNLIDLKLPYSQIEQIWEEEKDTSNLQWLDLNHSSKLHSLSGLSRAQKLQSI 690

Query: 438 --------ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
                     +P  +QN + L  L+ +GC SL S P ++  V   T+  S C    EF  
Sbjct: 691 NLEGCTGLKTLPQVLQNMESLMFLNLRGCTSLESLP-DITLVGLRTLILSNCSRFKEFKL 749

Query: 490 ISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
           I+  +  LYL  +AI+E+PS+I  L  L  L L+ CK L  +  S   L+++  +IL GC
Sbjct: 750 IAKNLEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIILSGC 809

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL-PGLEVLFVEDCSKLDNLPDNIGS 608
            +LE FPE+ + ++HLK +  D T I ++P    +L P   +   +    L   P  I  
Sbjct: 810 SSLESFPEVNQNLKHLKTLLLDGTAIKKIPDILHHLSPDQGLTSSQSNCHLCEWPRGIYG 869

Query: 609 LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           L  +  +  +++    LP S+     L  LD  HCK L S P
Sbjct: 870 LSSVRRLSLSSNEFRILPRSIGYLYHLNWLDLKHCKNLVSVP 911



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 160/627 (25%), Positives = 261/627 (41%), Gaps = 106/627 (16%)

Query: 444  IQNFKYLSALSFKGCQSLRS---FPSNLHFVCPVTINFSYCVNLIEFPQIS-------GK 493
            ++  K+ ++   + C++  S   FP  L F+ P  + +   +N +++P+ +         
Sbjct: 585  LRYLKFYNSHCHRECEAEDSKLNFPEGLEFL-PQELRY---LNWLKYPEKNLPINFDPKN 640

Query: 494  VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
            +  L L  S IE++    +  ++L+ LDL    +L  +S    + + L ++ L GC  L+
Sbjct: 641  LIDLKLPYSQIEQIWEEEKDTSNLQWLDLNHSSKLHSLS-GLSRAQKLQSINLEGCTGLK 699

Query: 554  HFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
              P++L+ ME L  +     T +  LP     L GL  L + +CS+         +LE L
Sbjct: 700  TLPQVLQNMESLMFLNLRGCTSLESLPDI--TLVGLRTLILSNCSRFKEFKLIAKNLEEL 757

Query: 613  YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
            Y      +AI +LPS++     L SL    CK L S                        
Sbjct: 758  YL---DGTAIKELPSTIGDLQKLISLKLKDCKNLLS------------------------ 790

Query: 673  IPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
            +P  I  L +++ + LSG ++ ES P + + +  L+ + L D   ++ +P++      LH
Sbjct: 791  LPDSIGNLKAIQEIILSGCSSLESFPEVNQNLKHLKTLLL-DGTAIKKIPDI------LH 843

Query: 732  LI--DCKMLQSLPVLPFCLESLDLTGC----------NMLRSLPE---LPLCLQYLNLED 776
             +  D  +  S      C     + G           N  R LP        L +L+L+ 
Sbjct: 844  HLSPDQGLTSSQSNCHLCEWPRGIYGLSSVRRLSLSSNEFRILPRSIGYLYHLNWLDLKH 903

Query: 777  CNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESL 836
            C  L S+P LP  LQ L    C  L+++            S+L      S  L    E L
Sbjct: 904  CKNLVSVPMLPPNLQWLDAHGCISLETI------------SIL------SDPLLAETEHL 945

Query: 837  KSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIV 896
             S    F FTNC KL     N I +    +I+ M+ A  R  YE  +   L  L G  I 
Sbjct: 946  HST---FIFTNCTKLYKVEENSIESYPRKKIQLMSNALAR--YEKGL--ALDVLIG--IC 996

Query: 897  LPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYV-SFQ 955
             PG ++P WF++++ G  +   LP H +   L G A CAV+  K   S   R     S +
Sbjct: 997  FPGWQVPGWFNHRTVGLELKQNLPRHWNAGGLAGIALCAVVSFKDYISKNNRLLVTCSGE 1056

Query: 956  FDLEIKTLSETKHVDLGY--NSRYIEDLIDSDRVILGFKPCLNVGFPD---GYHHTIATF 1010
            F  E KTL +   +  G+  +  Y    I SD V +G+   LN    D   G   T A+ 
Sbjct: 1057 FKKEDKTLFQFSCILGGWTEHGSYEAREIKSDHVFIGYTSWLNFMKSDDSIGCVATEASL 1116

Query: 1011 KFFAERKFYKIK-----RCGLCPVYAN 1032
            +F       ++      +CG   +Y++
Sbjct: 1117 RFQVTDGTREVTNCTVVKCGFSLIYSH 1143


>gi|13517480|gb|AAK28811.1|AF310966_1 resistance-like protein P-B [Linum usitatissimum]
          Length = 1211

 Score =  287 bits (735), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 260/836 (31%), Positives = 408/836 (48%), Gaps = 125/836 (14%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEG--SCFVSDVRGNSETAGGLEHLQ 58
            MD  D   I+G+WGMGG+GKTTLA+A +++ +   +G    FV +V    E   G+E + 
Sbjct: 211  MDKLDDTCIIGLWGMGGVGKTTLAEACYERVTSSNKGIKHLFVRNVNEICEKHHGVEKIV 270

Query: 59   KQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRL-IGEL----DQ 112
             ++ S  L E  ++    NI  + +ER+ R ++ +VLD+V  + QL++L +G +      
Sbjct: 271  HKLYSKLLDENNIDREDLNIA-YRRERLSRSRVFVVLDNVETLEQLEQLALGYVFNLSKV 329

Query: 113  FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
            F  GSRI++TTR+K+VL+       KIY V  L  +E+   F   AFK++  P+D NW  
Sbjct: 330  FAAGSRIIITTRNKKVLQNAMA---KIYNVECLNNKESIRLFSLHAFKQDR-PQD-NWTD 384

Query: 173  RS--VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
            +S   +SY KGNPL L++LG +L  +   +W  +L  L    +S    I  IL+ S++KL
Sbjct: 385  KSHLAISYCKGNPLALKILGGALFGEDVHYWRSLLTGLR---QSGNLGIESILRRSYDKL 441

Query: 231  TPRVKSIFLDIACFFEGEDK----DFVASILDDSESDVLDILIDKSLV----SISGNFLN 282
                K IF+D+AC   G  +    D++A++   S   V D LIDKSL+    S +G  + 
Sbjct: 442  GKEEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVRVKD-LIDKSLLTCVPSENGEMIE 500

Query: 283  MHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLK---------------------- 320
            +HD+L+EM   IV++E +   GKRSRL DP ++ ++L                       
Sbjct: 501  VHDLLKEMAWNIVKEEPKL--GKRSRLVDPDDVHKLLSTSEVKNWSTSIVNLFKGIVMVI 558

Query: 321  -----------HNKGTDAI------EGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPK 363
                       H +G D +      EGI LDLS  K + L   AF  M++L   KF  P+
Sbjct: 559  PRRKRRKVTDMHERGYDPLEEHRTTEGICLDLSGTKEMYLKANAFEGMNSLTFLKFKSPE 618

Query: 364  F-YEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
              Y    L ++ T+  L Y      +GL+ LP+ LR+L WD YP ++LP+ F P++LV L
Sbjct: 619  LDYAQYPLKNVKTKIHLPY------DGLNSLPEGLRWLQWDGYPSKSLPAKFYPQHLVHL 672

Query: 423  NLRCSKVEQPWEG--EKACVPSSIQNFKYLSAL---------------SFKGCQSLRSFP 465
             +R S + + WEG  +   V   + + +Y + L                  GC+SL   P
Sbjct: 673  IIRGSPIRRCWEGYDQPQLVNLIVLDLRYCTNLIAIPDISSSLNLEELLLFGCRSLVEVP 732

Query: 466  SNLHFVCP-VTINFSYCVNLIEFP-----QISGKVTRLYLGQSAIEEVPSSIECLTDLEV 519
             ++ ++   VT++ + C NL   P     ++   V    LG +   E+ S      +LE+
Sbjct: 733  FHVQYLTKLVTLDINVCKNLKRLPPKLDSKLLKHVRMQGLGITRCPEIDSR-----ELEI 787

Query: 520  LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITEL- 578
             DLR    L  + ++   ++    L L G  N+  FP I      LK     RT I E+ 
Sbjct: 788  FDLRFTS-LGELPSAIYNVKQNGVLRLHG-KNITKFPGI---TTILKLFTLSRTSIREID 842

Query: 579  ---------PSSFENLPGLEVLFVEDCSKLDNLPDNIGSL--EYLYYILAAASAISQLPS 627
                      S    LP  + L++    +L+ LP++I ++  E LY  +  +  I  LP 
Sbjct: 843  LADYHQQHQTSDGLLLPRFQNLWLTGNRQLEVLPNSIWNMISEELY--IGRSPLIESLPE 900

Query: 628  SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
                 + L SL    C+ L S P T +  L ++  L + +  ++ +P  I  L  L  + 
Sbjct: 901  ISEPMSTLTSLHVFCCRSLTSIP-TSISNLRSLRSLRLVETGIKSLPSSIHELRQLHSIC 959

Query: 688  LSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
            L    + ES+P  I ++S+L    +     + SLPELP  LK L + DCK LQ+LP
Sbjct: 960  LRDCKSLESIPNSIHKLSKLGTFSMSGCESIPSLPELPPNLKELEVRDCKSLQALP 1015


>gi|15230846|ref|NP_189178.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
 gi|332643497|gb|AEE77018.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
          Length = 1981

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 299/1020 (29%), Positives = 472/1020 (46%), Gaps = 115/1020 (11%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-LQKQMLS 63
            D V+++GIWG  GIGKTT+A+ +  Q S  F+ S  + +++    +    E+ +Q Q+ +
Sbjct: 221  DDVRMIGIWGPPGIGKTTIARFLLSQVSKSFQLSTIMVNIKECYPSPCLDEYSVQLQLQN 280

Query: 64   TTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
              LS+ +      IPH    +ER++  K+ +VLDDV+++GQL  L  E   FG GSRI++
Sbjct: 281  KMLSKMINQKDIMIPHLGVAQERLKDKKVFLVLDDVDQLGQLDALAKETRWFGPGSRIII 340

Query: 122  TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
            TT + R+L   R     IY+V     +EAF+ FC  AF + H        SR V     G
Sbjct: 341  TTENLRLLMAHRINH--IYKVEFSSTDEAFQIFCMHAFGQKHPYNGFYELSREVTELAGG 398

Query: 182  NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
             PL L+V+GSSL    K  W + L  L    + +I     IL  S+  L+   K +FL I
Sbjct: 399  LPLGLKVMGSSLRGMSKQEWKRTLPRLRTCLDGKIE---SILMFSYEALSHEDKDLFLCI 455

Query: 242  ACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
            ACFF  +    V   L D   DV   L +L +KSL+ I      MH +L ++GR+I   +
Sbjct: 456  ACFFNYQKIKKVEKHLADRFLDVRQGLYVLAEKSLIHIGTGATEMHTLLVQLGREIAHTQ 515

Query: 299  SEKEPGKRSRLWDPKEISRVLKHNK--GTDAIEGIFLDLSKI--KGINLDPRAFTNMSNL 354
            S  +P K   L D +EI   L       +  I G+  DLSK   +  N+  +    MSNL
Sbjct: 516  STNDPRKSLFLVDEREICEALSDETMDSSRRIIGMDFDLSKNGEEVTNISEKGLQRMSNL 575

Query: 355  RLFKF---YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            +  +F      +      +   S         V     L+Y  +++R LHW  +    LP
Sbjct: 576  QFIRFDGRSCARHSSNLTVVRSSDNNCAHPDTVNALQDLNYQFQEIRLLHWINFRRLCLP 635

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
            S F P+ LVELN+  S     WEG KA     ++N K++  LS+    SL+  P      
Sbjct: 636  STFNPEFLVELNMPSSTCHTLWEGSKA-----LRNLKWMD-LSYS--ISLKELPDLSTAT 687

Query: 472  CPVTINFSYCVNLIEFPQISGKVTRLYL----GQSAIEEVPSSIECLTDLEVLDLR---- 523
                +   YCV+L++ P   GK+ +L +    G ++I E+PS  + +T L+ LDL     
Sbjct: 688  NLEELILKYCVSLVKVPSCVGKLGKLQVLCLHGCTSILELPSFTKNVTGLQSLDLNECSS 747

Query: 524  -------------------GCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEH 564
                               GC RL ++  S  K  +L   IL GC +L   P +      
Sbjct: 748  LVELPSSIGNAINLQNLDLGCLRLLKLPLSIVKFTNLKKFILNGCSSLVELPFMGNATNL 807

Query: 565  LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAIS 623
                  + + + ELPSS  N   L+ L + +CS L  LP  IG+   L  + L   S++ 
Sbjct: 808  QNLDLGNCSSLVELPSSIGNAINLQNLDLSNCSSLVKLPSFIGNATNLEILDLRKCSSLV 867

Query: 624  QLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSS 682
            ++P+S+     L  LD S C  L   P + +  +S + +L++ + + + ++P    + ++
Sbjct: 868  EIPTSIGHVTNLWRLDLSGCSSLVELPSS-VGNISELQVLNLHNCSNLVKLPSSFGHATN 926

Query: 683  LEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI------DC 735
            L  L LSG ++   LP+ I  ++ L+ ++L +     +L +LP  +  LHL+       C
Sbjct: 927  LWRLDLSGCSSLVELPSSIGNITNLQELNLCN---CSNLVKLPSSIGNLHLLFTLSLARC 983

Query: 736  KMLQSLP--VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLL 793
            + L++LP  +    LE LDLT C+  +S PE+   ++ L L D   +  +P        L
Sbjct: 984  QKLEALPSNINLKSLERLDLTDCSQFKSFPEISTNIECLYL-DGTAVEEVPSSIKSWSRL 1042

Query: 794  TVRNCNRLQSLPEILLCLQELDASVLEKLS--KHSPDLQWAPESLK--SAAICFEFTNCL 849
            TV + +  + L E         + VL+ ++  +   D+Q     +K  S         C 
Sbjct: 1043 TVLHMSYFEKLKEF--------SHVLDIITWLEFGEDIQEVAPWIKEISRLHGLRLYKCR 1094

Query: 850  KLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLS------------ELRGSLI-- 895
            KL        L +SL  I      SL    + + N  LS            E R  +I  
Sbjct: 1095 KLLSLPQ---LPESLSIINAEGCESLE-TLDCSYNNPLSLLNFAKCFKLNQEARDFIIQI 1150

Query: 896  ------VLPGSEIPDWFSNQ-SSGSSICIQL---PPHSSCRNLIGFAFCAVLDSKKVDSD 945
                  VLPG+E+P +F+++ ++G+S+ I+L   P  +S R    F  C VL   K D+D
Sbjct: 1151 PTSNDAVLPGAEVPAYFTHRATTGASLTIKLNERPISTSMR----FKACIVL--IKCDND 1204



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 180/549 (32%), Positives = 289/549 (52%), Gaps = 49/549 (8%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG-------NSETAGGLEH 56
            SD V+++GIWG  GIGKTT+A+ +F QFS  FE S F+ +++         S+      H
Sbjct: 1442 SDEVRMIGIWGPSGIGKTTIARFLFSQFSDSFELSAFMENIKELMYRKPVCSDDYSAKLH 1501

Query: 57   LQKQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            LQ Q +S  ++  ++V  P++    + R+   K+LIVLD++++  QL  +  E   FG G
Sbjct: 1502 LQNQFMSQIINH-MDVEVPHLG-VVENRLNDKKVLIVLDNIDQSMQLDAIAKETRWFGHG 1559

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SRI++TT+D+++L K  G    IY+V+     EA + FC  A  +    ++    +  V 
Sbjct: 1560 SRIIITTQDQKLL-KAHGI-NHIYKVDYPSTHEACQIFCMSAVGKKFPKDEFQELALEVT 1617

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            +     PL L V+GS      K  W   L  L    +S   +I  ILK S++ L    K 
Sbjct: 1618 NLLGNLPLGLRVMGSHFRGMSKQEWINALPRLRTHLDS---NIQSILKFSYDALCREDKD 1674

Query: 237  IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQ 293
            +FL IAC F  +  + V + L     D      +L +KSL+SI   ++ MH++L+ +GR+
Sbjct: 1675 LFLHIACTFNNKRIENVEAHLTHKFLDTKQRFHVLAEKSLISIEEGWIKMHNLLELLGRE 1734

Query: 294  IVRQESE--KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTN 350
            IV  E E  +EPGKR  L D ++I  VL  + G+ ++ GI+ + +++ G +N+  RAF  
Sbjct: 1735 IVCHEHESIREPGKRQFLVDARDICEVLTDDTGSKSVVGIYFNSAELLGELNISERAFEG 1794

Query: 351  MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
            MSNL+  +    +                   K+ LP GL Y+ +KLR L WD +PL  L
Sbjct: 1795 MSNLKFLRIKCDR-----------------SDKMYLPRGLKYISRKLRLLEWDRFPLTCL 1837

Query: 411  PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
            PSNF  + LVELN+R SK+ + WEG       S+ N K+++    K  + L  F +  + 
Sbjct: 1838 PSNFCTEYLVELNMRHSKLVKLWEGNL-----SLGNLKWMNLFHSKNLKELPDFSTATNL 1892

Query: 471  VCPVTINFSYCVNLIEFPQISGKVT---RLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCK 526
                T+    C +L+E P   G      +L+L + +++ E+P+SI  L  L+ + L+GC 
Sbjct: 1893 ---QTLILCGCSSLVELPYSIGSANNLQKLHLCRCTSLVELPASIGNLHKLQNVTLKGCS 1949

Query: 527  RLKRISTSF 535
            +L+ + T+ 
Sbjct: 1950 KLEVVPTNI 1958


>gi|356561221|ref|XP_003548881.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1126

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 243/755 (32%), Positives = 350/755 (46%), Gaps = 101/755 (13%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V +VGI G+ G+GKTTLA A+++     FE SCF+ +VR  S    GL HLQ  +LS 
Sbjct: 208 DVVHMVGIHGLPGVGKTTLAVAVYNSIVDHFEASCFLENVRETS-NKNGLVHLQSVLLSK 266

Query: 65  TLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
           T  E             + ++++ K+L++LDDV+E  QL+ +IG  D FG+GSR+++TTR
Sbjct: 267 TDGEIKLANSREGSTIIQRKLKQKKVLLILDDVDEHKQLQAIIGNPDWFGRGSRVIITTR 326

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS--RSVVSYTKGN 182
           D+ +L   +   K  Y V  L  + A +     AF E     D ++H      ++Y  G 
Sbjct: 327 DEHLLALHK--VKITYEVRELNKKHALQLLTQKAF-ELEKEVDPSYHDILNRAITYASGL 383

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL LEV+GS+L  K    W   L    RI + +I   YDILK+S++ L    KSIFLDIA
Sbjct: 384 PLALEVMGSNLFGKSIEEWESALDGYERIPDKKI---YDILKVSYDALNEDEKSIFLDIA 440

Query: 243 CFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSIS---GNFLNMHDILQEMGRQIV 295
           C F+  +  +V  IL       +     +L+ KSL++I       + +HD++++MG++IV
Sbjct: 441 CGFKDYELTYVQDILYAHYGRCMKYHIGVLVKKSLINIHCWPTKVMRLHDLIEDMGKEIV 500

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSNL 354
           R+ES  EPGKRSRLW  ++I++VL+ NKGT  IE I ++ S   + +  D   F  M NL
Sbjct: 501 RRESPTEPGKRSRLWSHEDINQVLQENKGTRKIEIICMNFSSFGEEVEWDGDGFKKMENL 560

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           +        F                        G  +LP  LR L W   P +  P NF
Sbjct: 561 KTLIIKSDCF----------------------SKGPKHLPNTLRVLEWSRCPSQEWPRNF 598

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP-----SNLH 469
            PK L    L  S +           P   +    L++L    C S R  P     SNL 
Sbjct: 599 NPKQLAICKLPHSSITS-----LRLAPLFKKRLVNLTSLILDECDSFRWIPDVSCLSNLE 653

Query: 470 FVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
                 ++F  C NL                      +  S+  L  L++LD  GC +LK
Sbjct: 654 -----NLSFRKCRNLF--------------------TIHHSVGLLEKLKILDAAGCPKLK 688

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
             S    KL SL      GC NL+ FPEIL KME++ ++      IT+LP SF NL  L+
Sbjct: 689 --SFPPLKLTSLERFEFSGCYNLKSFPEILGKMENMTQLSWTGCAITKLPPSFRNLTRLQ 746

Query: 590 VLFVEDCSKLD----NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKG 645
           +L +    K D     L  NI  +  L  I AA      LP  V        L S  C  
Sbjct: 747 LLVLTTFIKYDFDAATLISNICMMPELNQIDAAGLQWRLLPDDVL------KLTSVVCSS 800

Query: 646 LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQ 705
           ++S              L +SD     +P  ++   +++ L LS + F  +P  IK+   
Sbjct: 801 VQSLT------------LELSDEL---LPLFLSCFVNVKKLNLSWSKFTVIPECIKECRF 845

Query: 706 LRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           L  + L+    LQ +  +P  LK L  +D   L S
Sbjct: 846 LTTLTLDYCYRLQEIRGIPPNLKILSAMDSPALNS 880


>gi|297791267|ref|XP_002863518.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309353|gb|EFH39777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1150

 Score =  287 bits (734), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 216/708 (30%), Positives = 345/708 (48%), Gaps = 75/708 (10%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           D  D  +IVGI GM GIGKT+LA  +F+++ ++F       ++R     +G  E ++K  
Sbjct: 202 DRCDETRIVGIVGMPGIGKTSLATELFNKYKYKFCRCVNFQNIREKWARSGA-ERVRKMF 260

Query: 62  LSTTLSEKLEVAGPNIPHFTKE-RVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           L   L E   ++     H   E ++   K+ +VLDDV+    L+ L+G  +   +GSRIV
Sbjct: 261 LEELL-EITNISDDEATHGCLESKLLLNKVFVVLDDVSSARHLQVLLGNRNWIKEGSRIV 319

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH---SRSVVS 177
           + TRD+ ++ +    +   Y V  L   +   +F  +AF+   C  ++  +   SR  V 
Sbjct: 320 IITRDRTLITEL---DPNPYVVPRLNLVDGLMYFSFYAFEARICDPEMESYMQMSREFVD 376

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y +GNPL L++LG  L  K ++ W K   D +  C ++I  I ++ KIS+++L+ + K  
Sbjct: 377 YARGNPLALQMLGMDLRGKGEAQW-KAWLDTSAKCPNKI--IQNLFKISYDELSEQEKDA 433

Query: 238 FLDIACFFEGEDKDFVASILDDSESDVLDI------LIDKSLVSISGNFLNMHDILQEMG 291
           FLDIACFF  ED+ +  S+LD  + +          L+ K  +SISG  + MHD+L    
Sbjct: 434 FLDIACFFRSEDEYYARSLLDSGDHESFQAAREITHLVHKFFISISGGCVEMHDLLHTFA 493

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
            +I    S      +SRL +   I   L+    T  + GI LD+S++  + L+  AFTNM
Sbjct: 494 MEICSLASCGVNQVKSRLRNGNYIIAALQGKMETKTVRGISLDMSELTNMPLERSAFTNM 553

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NLR  K Y           S    E     K+  P+GL +  K++RYL W  +PL  LP
Sbjct: 554 CNLRYLKLY----------SSTCPLECEGDCKLNFPDGLSFPLKEVRYLEWLKFPLDELP 603

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKA--------------------------------- 438
           S+F PKNL++L L  SK++Q W+  K                                  
Sbjct: 604 SDFTPKNLIDLKLPYSKIKQVWKESKGTPKLKWVDLNNSRMLQKISGFSKAPNLLRLNLE 663

Query: 439 ------CVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
                 C+   ++  + L  L+ +GC SLR  P  ++     T+  + C+ L EF  IS 
Sbjct: 664 GCTSLDCLSEEMKTMQSLVFLNLRGCTSLRCLPE-MNLSSLTTLILTGCLKLREFRLISE 722

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
            +  LYL  +AI+++P+ +  L  L +L+L+ C+RL+ I     KL++L  LIL GC NL
Sbjct: 723 NIESLYLDGTAIKDLPTDMVKLQRLILLNLKECRRLEIIPECIGKLKALQELILSGCSNL 782

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELP---SSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
           + FP + + ME+ + +  D T I E+P   S   +L  L  L       + +L  +I  L
Sbjct: 783 KSFPNLEDTMENFRVLLLDGTSIDEMPKIMSGSNSLSFLRRLSFRRNDVISSLGSDISQL 842

Query: 610 EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF--PRTFLL 655
            +L ++        +L S   L   ++ LD+  C  L++   P  FL+
Sbjct: 843 YHLKWL--DLKYCKKLKSLSTLPPNIQCLDAHGCISLQTVTSPLAFLM 888



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 183/446 (41%), Gaps = 81/446 (18%)

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
           L L  S I++V    +    L+ +DL   + L++IS  F K  +L+ L L GC +L+   
Sbjct: 614 LKLPYSKIKQVWKESKGTPKLKWVDLNNSRMLQKIS-GFSKAPNLLRLNLEGCTSLDCLS 672

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFE-NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
           E ++ M+ L  ++ +    T L    E NL  L  L +  C KL        ++E LY  
Sbjct: 673 EEMKTMQSL--VFLNLRGCTSLRCLPEMNLSSLTTLILTGCLKLREFRLISENIESLYL- 729

Query: 616 LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
               +AI  LP+ +     L  L+   C+ LE                         IP+
Sbjct: 730 --DGTAIKDLPTDMVKLQRLILLNLKECRRLEI------------------------IPE 763

Query: 676 EIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID 734
            I  L +L+ L LSG +N +S P +   M   R + L+      S+ E+P          
Sbjct: 764 CIGKLKALQELILSGCSNLKSFPNLEDTMENFRVLLLDG----TSIDEMP---------- 809

Query: 735 CKMLQSLPVLPFCLESLDLTGCNMLRSLPE---LPLCLQYLNLEDCNMLRSLPELPLCLQ 791
            K++     L F L  L     +++ SL         L++L+L+ C  L+SL  LP  +Q
Sbjct: 810 -KIMSGSNSLSF-LRRLSFRRNDVISSLGSDISQLYHLKWLDLKYCKKLKSLSTLPPNIQ 867

Query: 792 LLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKL 851
            L    C  LQ++   L       A ++     HS                F FTNC KL
Sbjct: 868 CLDAHGCISLQTVTSPL-------AFLMPTEDTHS---------------MFIFTNCCKL 905

Query: 852 NGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSS 911
           N  A N I A  +LR         RL  +   NE            PG E+P WFS+Q+ 
Sbjct: 906 NEAAKNDI-ASHILR-------KCRLISDDHHNESFVFRALIGTCYPGYEVPPWFSHQAF 957

Query: 912 GSSICIQLPPHSSCRNLIGFAFCAVL 937
            S +  +LPPH      +G A CA++
Sbjct: 958 SSVLEPKLPPHWCDNKFLGLALCAIV 983


>gi|105922631|gb|ABF81427.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1336

 Score =  287 bits (734), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 247/760 (32%), Positives = 369/760 (48%), Gaps = 147/760 (19%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE--KLEVAGPNI 77
           KTT+A+ ++D+   +FEGS F+++VR      GG   LQ+Q+LS  L E   L+ +   I
Sbjct: 204 KTTVARVLYDKIRWQFEGSYFLANVREVFAEKGGPRRLQEQLLSEILMECASLKDSYRGI 263

Query: 78  PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRG-EE 136
               K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+RD  V   F G ++
Sbjct: 264 -EMIKRRLRLKKILLILDDVDDKKQLEFLAAEPGWFGPGSRIIITSRDTNV---FTGNDD 319

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
            KIY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV+       
Sbjct: 320 TKIYEAEKLNDDDALMLFNQKAFKNDQPTEDFVKLSKQVVGYANGLPLALEVI------- 372

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
                                                      DIACF +G +KD +  I
Sbjct: 373 -------------------------------------------DIACFLKGFEKDRIIRI 389

Query: 257 LDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           LD           +LI++SL+S+  + + MHD+LQ MG++IVR ES +EPG+RSRLW  +
Sbjct: 390 LDSCGFHAHIGTQVLIERSLISVYRDQVWMHDLLQIMGKEIVRSESSEEPGRRSRLWTFE 449

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           ++   L  N G + IE IFLD+ +IK    +  AF+ MS LRL K               
Sbjct: 450 DVRLALMDNTGKEKIEAIFLDMPEIKEAQWNMEAFSKMSRLRLLKI-------------- 495

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
                     VQL  G + L  KLR+L W +YP ++LP+  +   LVEL++  S +EQ W
Sbjct: 496 --------DNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIEQLW 547

Query: 434 EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG- 492
            G K+ V     N K                           IN S  +NL + P ++G 
Sbjct: 548 YGCKSAV-----NLK--------------------------IINLSNSLNLSKTPDLTGI 576

Query: 493 -KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
             +  L L G +++ +V  S+     L+ ++L  CK + RI  +  ++ SL    L GC 
Sbjct: 577 PNLESLILEGCTSLSKVHPSLAHHKKLQYMNLVNCKSI-RILPNNLEMESLKVFTLDGCS 635

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
            LE FP+I+  M  L  +  D T + EL SS  +L  LEVL + +C  L+++P +IG L+
Sbjct: 636 KLEKFPDIVGNMNCLMELRLDGTGVEELSSSIHHLISLEVLSMNNCKNLESIPSSIGCLK 695

Query: 611 YLYYIL--------------------AAASAISQLPSSVALSNMLRSLDSSHCKGL---- 646
            L  +                     A+ ++I Q P+ + L   L+ L    CK +    
Sbjct: 696 SLKKLDLSGCSELKNLEKVESSEEFDASGTSIRQPPAPIFLLKNLKVLSFDGCKRIAVSL 755

Query: 647 --ESFPRTFLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
             +  P   L GL ++ +L +    +RE  +P++I  LSSL+ L LS NNF SLP  + Q
Sbjct: 756 TDQRLPS--LSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNFVSLPRSVNQ 813

Query: 703 MSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
           +S L  + LED  ML+SLPE+P  ++ ++L  C  L+ +P
Sbjct: 814 LSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCTSLKEIP 853


>gi|356506778|ref|XP_003522153.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1161

 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 203/594 (34%), Positives = 310/594 (52%), Gaps = 73/594 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + SS+ V ++G+WGMGGIGKTT AKAI+++    FEG  F++ +R       G   LQKQ
Sbjct: 290 LKSSNHVLLLGMWGMGGIGKTTTAKAIYNKIGRNFEGRSFLAHIREVWGQDTGKICLQKQ 349

Query: 61  MLSTTLSEKLEVAG-PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           +L     +   +    +  +  K+R+   ++L+VLDDV+E+ QL  L G  + FG+GSRI
Sbjct: 350 ILFDICKQTETIHNVESGKYLLKQRLCHKRVLLVLDDVSELEQLNTLCGSREWFGRGSRI 409

Query: 120 VVTTRDKRVLEKFRGEE-KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           ++T+RDK +L   RG+   K+Y + G++  E+ E F   AFK+   PED    S +++ Y
Sbjct: 410 IITSRDKHIL---RGKGVDKVYIMKGMDERESIELFSWHAFKQESLPEDFIELSANLIEY 466

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSI 237
           + G PL LEVLG  L     + W  VL  L RI   ++      LKIS++ L+    + I
Sbjct: 467 SGGLPLALEVLGCYLFDMEVTEWKTVLQKLKRIPNCQVQKK---LKISYDGLSDDTEREI 523

Query: 238 FLDIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQ 293
           FLDIACFF G D++ V  IL+         + +L+++SLV++   N L MHD+L++MGR+
Sbjct: 524 FLDIACFFIGMDRNDVICILNGCGLFAEHGIRVLVERSLVTVDDKNKLGMHDLLRDMGRE 583

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           I+R +S KEP +RSRLW  +++  VL    GT A+EG+ L L +     L   AF  M  
Sbjct: 584 IIRAKSPKEPEERSRLWFHEDVLDVLSKETGTKAVEGLTLMLPRTNTKCLSTTAFKKMKK 643

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LRL                      L  + VQL      L + LR+L W  +PL+ +P++
Sbjct: 644 LRL----------------------LQLAGVQLAGDFKNLSRDLRWLCWHGFPLKCIPTD 681

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           F   +LV + L  S V+  W+  +      I N  + S L+                   
Sbjct: 682 FYQGSLVSIELENSNVKLLWKETQLMEKLKILNLSHSSNLT------------------- 722

Query: 474 VTINFSYCVN-----LIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
            T +FS   N     LI+ P++S              +V  +I  L ++ +++L+ C  L
Sbjct: 723 QTPDFSNLPNLEKLILIDCPRLS--------------KVSHTIGRLKEVVMINLKDCVSL 768

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
           + +  S  KL+SL TLIL GCL ++   E LE+M+ L  + +D T IT +P S 
Sbjct: 769 RNLPRSIYKLKSLKTLILSGCLMIDKLEEDLEQMKSLTTLIADNTAITRVPFSL 822



 Score = 40.4 bits (93), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 8/148 (5%)

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI- 615
           +++EK++ L   +S  + +T+ P  F NLP LE L + DC +L  +   IG L+ +  I 
Sbjct: 705 QLMEKLKILNLSHS--SNLTQTPD-FSNLPNLEKLILIDCPRLSKVSHTIGRLKEVVMIN 761

Query: 616 LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
           L    ++  LP S+     L++L  S C  ++      L  + ++  L   + A+  +P 
Sbjct: 762 LKDCVSLRNLPRSIYKLKSLKTLILSGCLMIDKLEED-LEQMKSLTTLIADNTAITRVPF 820

Query: 676 EIAYLSSLEILYLSGN---NFESLPAII 700
            +    S+  + L G+   + + +P+II
Sbjct: 821 SLVRSRSIGYISLCGHEGFSRDVIPSII 848


>gi|449482307|ref|XP_004156243.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1857

 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 170/437 (38%), Positives = 253/437 (57%), Gaps = 32/437 (7%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V+ VGIWGMGGIGKTT+A+ I+   SH F+G  F+ +V+  +     +  LQ+++L+ 
Sbjct: 223 DDVRFVGIWGMGGIGKTTIARIIYKSVSHLFDGCYFLDNVK-EALKKEDIASLQQKLLTG 281

Query: 65  TLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
           TL ++ +++   +     K R+  +K LI+LDDVN + QL++L G LD FG GSR++VTT
Sbjct: 282 TLMKRNIDIPNADGATLIKRRISNIKALIILDDVNHLSQLQKLAGGLDWFGSGSRVIVTT 341

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           RD+ +L    G E++ Y V  L+ EE  + F   AF E H  E+       VV Y  G P
Sbjct: 342 RDEHLLIS-HGIERR-YNVEVLKIEEGLQLFSQKAFGEEHTKEEYFDVCSQVVDYAGGLP 399

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L +EVLGSSL  K    W   ++ + ++ E    +I + LKIS+  L    + IFLDIAC
Sbjct: 400 LAIEVLGSSLRNKPMEDW---INAVEKLWEVRDKEIIEKLKISYYMLEKSEQKIFLDIAC 456

Query: 244 FFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
           FF+ + K     IL+         L+IL +K L++   + L+MHD++QEMG++IVRQ   
Sbjct: 457 FFKRKSKKQAIEILESFGFPAVLGLEILEEKCLITTPHDKLHMHDLIQEMGQEIVRQNFL 516

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
            EP KR+RLW  ++++  L  ++GT+AIEGI +DL +    +L+ +AF+ M+NLR+ K  
Sbjct: 517 NEPEKRTRLWLREDVNLALSRDQGTEAIEGIMMDLDEEGESHLNAKAFSEMTNLRVLKL- 575

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                                + V L   ++YL  +LR+L+W  YPL+TLPSNF P NL+
Sbjct: 576 ---------------------NNVHLSEEIEYLSDQLRFLNWHGYPLKTLPSNFNPTNLL 614

Query: 421 ELNLRCSKVEQPWEGEK 437
           EL L  S +   W   K
Sbjct: 615 ELELPNSSIHHLWTASK 631



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 232/778 (29%), Positives = 353/778 (45%), Gaps = 124/778 (15%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKA----IFDQFSH--------EFEGSCFVSDVRGNSET 50
             S+ V+ +GI GM GIGKTTLA+     IF  F           F G   VS  +   + 
Sbjct: 787  GSNDVRFIGIVGMSGIGKTTLAEMTYLRIFKPFVSALRKPYFLHFVGRSIVSLQQQLLDQ 846

Query: 51   AGGLEHLQKQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGEL 110
               L+ +  Q+L      +L +      H +  +     +LIV D + E  QL+ L G  
Sbjct: 847  LAFLKPIDIQVLDENHGVELIMQ-----HLSSLK----NVLIVFDGITERSQLEMLAGSP 897

Query: 111  DQFGQGSRIVVTTRDKRVLEKFRGEEK-KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLN 169
            D FG GSRI++TT +K +      ++K + Y V  L  E AF  FC  AF ++   ++++
Sbjct: 898  DWFGAGSRIIITTTNKNIFHHPNFKDKVQEYNVELLSHEAAFSLFCKLAFGDHPHTQNMD 957

Query: 170  WHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNK 229
                 ++      PL LE +  SL  +    W   L + +++    I    D+LK S+  
Sbjct: 958  DLCNEMIEKVGRLPLALEKIAFSLYGQNIDVWEHTLKNFHQVVYDNI--FSDVLKSSYEG 1015

Query: 230  LTPRVKSIFLDIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLNMHD 285
            L    + IFLD+ACF  GE  D V  IL      S    L +L+D+ L+ I    + MH 
Sbjct: 1016 LEAESQQIFLDLACFLNGEKVDRVIQILQGFGYTSPQTNLQLLVDRCLIDILDGHIQMHI 1075

Query: 286  ILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDP 345
            ++  MG++IV +E      +++R+W   +  R+   N     I GI +DL + + + L  
Sbjct: 1076 LILCMGQEIVHRELGN--CQQTRIWLRDDARRLFHENNELKYIRGIVMDLEEEEELVLKA 1133

Query: 346  RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
            +AF +MS LR+ +                       + VQL   ++ L  KL  L+W  Y
Sbjct: 1134 KAFADMSELRILRI----------------------NNVQLSEDIECLSNKLTLLNWPGY 1171

Query: 406  PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
            P + LPS F+P +L+EL+L  S VE+ W G         QNFK L  +     + L   P
Sbjct: 1172 PSKYLPSTFQPPSLLELHLPGSNVERLWNG--------TQNFKNLKEIDASDSKFLVETP 1223

Query: 466  SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSA-IEEVPSSIECLTDLEVLDLRG 524
                       NFS      E P    K+ RL L     + +V SSI  L  L +LD+ G
Sbjct: 1224 -----------NFS------EAP----KLRRLILRNCGRLNKVHSSINSLHRLILLDMEG 1262

Query: 525  CKRLKRISTSF-CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI-------- 575
            C   +  S    CK  SL TL+L  C  LE FPE    M +L  ++ D T I        
Sbjct: 1263 CVSFRSFSFPVTCK--SLKTLVLSNC-GLEFFPEFGCVMGYLTELHIDGTSINKLSPSIT 1319

Query: 576  ----------------TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAA 619
                            + LP+    L  L+ L +  C  LD +P  +  +++L  +    
Sbjct: 1320 NLLGLVLLNLRNCIRLSSLPTEICRLSSLKTLILNGCKNLDKIPPCLRYVKHLEELDIGG 1379

Query: 620  SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV-------RE 672
            ++IS +P        L +L   +C+ L+S     L GL+A  L  ++D  +        +
Sbjct: 1380 TSISTIP-------FLENLRILNCERLKSNIWHSLAGLAAQYLRSLNDLNLSDCNLVDED 1432

Query: 673  IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
            IP ++   SSLEIL LS N+FE L   IKQ+  L+ ++L D N L+ +P+LP  +KY+
Sbjct: 1433 IPNDLELFSSLEILDLSSNHFERLSESIKQLINLKVLYLNDCNKLKQVPKLPKSIKYV 1490



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 11/232 (4%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            ++ S  +  VGI+G  GIGKTT+A+ +++    EF+  CF+      S     L  LQ Q
Sbjct: 1635 LERSKDILFVGIFGSSGIGKTTIAEVVYNTIIDEFQSGCFLY----LSSKQNSLVPLQHQ 1690

Query: 61   MLSTTLSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
            +LS  LS++ ++   +      K  +   K++IVLD V+E  Q+++L+G  + F  GSR+
Sbjct: 1691 ILSHLLSKETKIWDEDHGAQLIKHHMSNRKVVIVLDGVDERNQIEKLVGSPNWFAPGSRV 1750

Query: 120  VVTTRDKRVLEKFRGEEK-KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            ++T  ++ VL +    ++ + Y+V  L  E A+  FC  AF +   P D N     +V  
Sbjct: 1751 IITATNRDVLHQLNYRDQVQEYKVELLSRESAYSLFCKNAFGDG--PSDKNDLCSEIVEK 1808

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
                PL L  +GS L  K    W +    L R+ E E +    ILK +  K+
Sbjct: 1809 VGRLPLALRTIGSYLHNKDLDVWNET---LKRLDEEEQNYFDTILKRNVEKI 1857


>gi|357469143|ref|XP_003604856.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505911|gb|AES87053.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 2019

 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 206/601 (34%), Positives = 317/601 (52%), Gaps = 77/601 (12%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +  S+ V ++GIWGMG   KTT+AK+I+++   +F+G  F+ ++R   ET      LQ+Q
Sbjct: 672  IQKSEDVLLLGIWGMG---KTTIAKSIYNEIGSKFDGKSFLLNIREFWETGTNQVSLQQQ 728

Query: 61   ML-----STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
            +L     +T+   +   +G N     KER+   ++L+VLDDVNE+ Q+K L G    FG 
Sbjct: 729  VLCDVYKTTSFKIRDIESGKNT---LKERLSDNRVLLVLDDVNELDQIKALCGSRKWFGP 785

Query: 116  GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
            GSRI++TTRD R+L   R ++  +Y +  ++  E+ E F   AFK+    ED   H   +
Sbjct: 786  GSRIIITTRDMRLLRSCRVDQ--VYEIKEMDEIESLELFSWHAFKQPSPIEDFATHLTDM 843

Query: 176  VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV- 234
            V+Y+   PL LEVLGS L   + + W KVL  L  I   E+      LK+SF+ L     
Sbjct: 844  VAYSGRFPLALEVLGSYLSGCKITEWQKVLEKLKCIPHDEVQKK---LKVSFDGLKDVTD 900

Query: 235  KSIFLDIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSISG-NFLNMHDILQEM 290
            K IFLDIACFF G DK+    IL+     +D+ + +L+++SLV++   N L MHD+L++M
Sbjct: 901  KQIFLDIACFFIGMDKNDAIQILNGCRFFADIGIKVLVERSLVTVDNRNKLRMHDLLRDM 960

Query: 291  GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
            GRQI+ +ES  +P  RSRLW  ++   VL  +KGT+A++G+ L+      + L+ +AF  
Sbjct: 961  GRQIIYEESPFDPENRSRLWRREDALDVLSKHKGTNAVKGLVLEFPIKNKVCLNTKAFKK 1020

Query: 351  MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
            M+ LRL +                         V+L     YL ++LR+L W  +P    
Sbjct: 1021 MNKLRLLRL----------------------GGVKLNGDFKYLSEELRWLCWHGFPSTYT 1058

Query: 411  PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
            P+ F+  +LV + L+ S ++Q W   K C    ++N K L                    
Sbjct: 1059 PAEFQQGSLVVVELKYSNLKQIW---KKC--KMLENLKIL-------------------- 1093

Query: 471  VCPVTINFSYCVNLIEFPQIS--GKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKR 527
                  N S+ +NL E P  S    + ++ L G  ++  V  SI  L  L +++L  C  
Sbjct: 1094 ------NLSHSLNLTETPDFSYMPNLEKIVLKGCPSLSTVSHSIGSLHKLLLINLTDCTG 1147

Query: 528  LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
            L+++  S  KL+SL TLIL GC  +    E LE+ME LK + +D+T IT++P S   L  
Sbjct: 1148 LRKLPKSIYKLKSLETLILSGCSKINKLEEDLEQMESLKTLIADKTAITKVPFSIVRLKS 1207

Query: 588  L 588
            +
Sbjct: 1208 I 1208



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/311 (35%), Positives = 164/311 (52%), Gaps = 40/311 (12%)

Query: 9    IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN-SETAGGLEHLQKQMLSTTLS 67
            +VGIWGM GIGK+T+A  I+ +F   F+G C +  + G   +   GL  LQ + L+   S
Sbjct: 1723 LVGIWGMTGIGKSTIANVIYHKFGPFFQGFCLLKTISGICKKKIHGLTSLQ-ESLAEFYS 1781

Query: 68   EKLEV-AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
             KL + +G NI    K   +  ++LIVLDDV+++ QLK L G    FG GS+I++TTRD+
Sbjct: 1782 NKLSIESGKNI---IKRSFQHKRVLIVLDDVDKLDQLKVLCGSRYWFGAGSKIIITTRDR 1838

Query: 127  RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK---GNP 183
            R+L++   +   IY V  L   E+                 LNW   S+ + T+   G P
Sbjct: 1839 RLLKQHGVDH--IYSVKELNERESLAL--------------LNWGGYSLPTNTQQYFGEP 1882

Query: 184  ---LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
               LV    G  LC         VL  L R+       + + L+ SF  L+   K +FLD
Sbjct: 1883 SRELVTNSWGLPLC-------KNVLKSLERLSIPAPR-LQEALEKSFRDLSDEEKQVFLD 1934

Query: 241  IACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS-GNFLNMHDILQEMGRQIVR 296
            IACFF G+ ++ V  IL+ S+  V   + +L DKSL++I   N + MH +LQ M R I++
Sbjct: 1935 IACFFVGKKQNDVQQILNKSKQYVALQISLLEDKSLITIDEDNKIQMHVMLQAMARGIIK 1994

Query: 297  QESEKEPGKRS 307
            +ES ++  + S
Sbjct: 1995 RESSQKTDQVS 2005



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 149/300 (49%), Gaps = 44/300 (14%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE 68
           ++GIWGM GIGKTT+A+AI+ Q    F    F+                 +Q L   + +
Sbjct: 217 LIGIWGMAGIGKTTIAQAIYHQIGPYFADKFFL-----------------QQKLIFDIDQ 259

Query: 69  KLEVAGPNI---PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
             E+    I       K R R  ++L+VLD+V+++ QL  L    + FG GS+I++T+R+
Sbjct: 260 GTEIKIRKIESGKQILKYRFRHKRILLVLDNVDKLEQLNALCENPEWFGVGSKIIITSRN 319

Query: 126 KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
           + +L++   +   IYRV  L+  E+ E F N+                 VV+Y+ G P  
Sbjct: 320 RHLLKEHGFDH--IYRVKELDGSESLELF-NYG----------------VVAYSGGWPPA 360

Query: 186 LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF 245
           L+ +G+ L  K    W  VL       +    +I + L++SFN L+   K IFLDIA F 
Sbjct: 361 LKEVGNFLHGKELHKWKDVLRRYQTF-DLPSPEILEDLEMSFNDLSDEEKHIFLDIAYFC 419

Query: 246 EGEDKDFVASILDDSESDV---LDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQESEK 301
            G +++ V   L+ S       +++L DKS ++I   N L M  +LQ M + I++ E+ +
Sbjct: 420 IGMNQNDVLQTLNRSTQCAALQINLLEDKSFLTIDKKNNLEMQVVLQAMAKDIIKSETSQ 479


>gi|297794589|ref|XP_002865179.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311014|gb|EFH41438.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1113

 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 236/754 (31%), Positives = 369/754 (48%), Gaps = 127/754 (16%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV-----------RGNSETAG 52
           S  V+ VGIWG  GIGKTT+A+A++ Q SH F+  C   D+           +GN +   
Sbjct: 200 SKEVRRVGIWGPSGIGKTTIARALYSQHSHVFD-VCVFLDIHFVSKSTKNYRKGNPDDYN 258

Query: 53  GLEHLQKQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
               LQK  LS  L +K +EV    +    +ER++  K+LIVLDD+++   L  L+G+ +
Sbjct: 259 MKLCLQKSFLSKILDQKDIEVEHLGV---IEERLKHQKVLIVLDDLDDQMVLDTLVGKDE 315

Query: 112 QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH 171
            FG GSRI+V T+DKR+LE        IY V     ++A E FC+ AF +    +     
Sbjct: 316 WFGCGSRIIVITKDKRLLEAHGINH--IYEVGFPSEKQALEMFCHSAFGQKSPDDGFVEL 373

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL- 230
           +  V +   G PL L++LG  +  ++   W   L  L +   ++  DI   LK+S++K+ 
Sbjct: 374 ATEVAARAGGLPLGLKILGKVMKNRKVEEWKGELLSLQK---NQNGDIGKTLKVSYDKID 430

Query: 231 TPRVKSIFLDIACFFEGEDKDFVASILD--DSESDVLDILIDKSLVSISGNFLN-----M 283
             + ++IF  IACFF G + D +  +L   D E+ V   L++KSL+S   ++ N     M
Sbjct: 431 IQKHRAIFRHIACFFNGAEIDNIKLMLPELDVETGVRH-LVEKSLISSKSSWNNTCTVDM 489

Query: 284 HDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINL 343
           H ++QEMG+Q+VR +SE EPG+R  L+D  ++  VL    GT+ + GI LDL++I  + +
Sbjct: 490 HCLVQEMGKQLVRAQSE-EPGEREFLFDSDDVCNVLGGTNGTNKVIGISLDLNEIDELEI 548

Query: 344 DPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWD 403
             +AF NM NLR  +F++          S   E+++ ++   LP  +D  P KL+ L+W 
Sbjct: 549 HKKAFKNMHNLRFLRFHI---------NSWEREKEVEWN---LPKKIDAFPPKLKLLNWP 596

Query: 404 TYPLRTLPSNFKPKNLVELNLRCSKV-EQPWEGEKACVPSSIQNFKYLSALSFKGCQSLR 462
            YP++ LP+ F+P  LVEL +  SK+ E+ WEG+K+         K+L  +   G  +L+
Sbjct: 597 GYPMKQLPAEFRPDKLVELRMPNSKILEKLWEGDKS--------LKFLKDMDLSGSLNLK 648

Query: 463 SFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDL 522
             P         T+N + C +L+                    E+PSSI  L  L  L++
Sbjct: 649 EIPDLSKATNLETLNLNGCSSLV--------------------ELPSSILNLNKLTDLNM 688

Query: 523 RGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHL----------------- 565
            GC  L+ + T   KL SL+ L L GC  L+ FP+I  K+  L                 
Sbjct: 689 AGCTNLEALPTG--KLESLIHLNLAGCSRLKIFPDISNKISELIINKTAFEIFPSQLRLE 746

Query: 566 ------------KRIYSDRTPITELPS-------SFENLPG------LEVLFVEDCSKLD 600
                       +R++    P+T L +       + + LP       LE L + +CS L 
Sbjct: 747 NLVELSLEHTMSERLWEGVQPLTNLKTIKLLGSENLKELPNLSMATSLETLNLNNCSSLV 806

Query: 601 NLP----DNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
            L      N+  L  L  I    S++  LP  + L ++ R L+ + C  L  FP      
Sbjct: 807 ELTLSTIQNLNKLTSLDMI--GCSSLETLPIGINLKSLYR-LNLNGCSQLRGFPDIS--- 860

Query: 657 LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
            + +  L ++  A+ E+P  I   SSLE L + G
Sbjct: 861 -NNITFLFLNQTAIEEVPSHINNFSSLEALEMMG 893



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 84/200 (42%), Gaps = 40/200 (20%)

Query: 393 LPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVP----------- 441
           +  K+  L  +       PS  + +NLVEL+L  +  E+ WEG +               
Sbjct: 722 ISNKISELIINKTAFEIFPSQLRLENLVELSLEHTMSERLWEGVQPLTNLKTIKLLGSEN 781

Query: 442 -----------------------------SSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
                                        S+IQN   L++L   GC SL + P  ++   
Sbjct: 782 LKELPNLSMATSLETLNLNNCSSLVELTLSTIQNLNKLTSLDMIGCSSLETLPIGINLKS 841

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
              +N + C  L  FP IS  +T L+L Q+AIEEVPS I   + LE L++ GCK LK IS
Sbjct: 842 LYRLNLNGCSQLRGFPDISNNITFLFLNQTAIEEVPSHINNFSSLEALEMMGCKELKWIS 901

Query: 533 TSFCKLRSLVTLILLGCLNL 552
               +L+ L  +    C  L
Sbjct: 902 PGLFELKDLDEVFFSDCKKL 921



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 221/522 (42%), Gaps = 65/522 (12%)

Query: 520  LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR-TPITEL 578
            L +   K L+++      L+ L  + L G LNL+  P+ L K  +L+ +  +  + + EL
Sbjct: 615  LRMPNSKILEKLWEGDKSLKFLKDMDLSGSLNLKEIPD-LSKATNLETLNLNGCSSLVEL 673

Query: 579  PSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRS 637
            PSS  NL  L  L +  C+ L+ LP   G LE L ++ LA  S +   P    +SN +  
Sbjct: 674  PSSILNLNKLTDLNMAGCTNLEALP--TGKLESLIHLNLAGCSRLKIFPD---ISNKISE 728

Query: 638  LDSSHCKGLESFPRTFLL-GLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL 696
            L  +     E FP    L  L  + L H     + E  Q +  L ++++L     N + L
Sbjct: 729  LIINKT-AFEIFPSQLRLENLVELSLEHTMSERLWEGVQPLTNLKTIKLL--GSENLKEL 785

Query: 697  PAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGC 756
            P     +S    +   + N   SL EL L            +Q+L  L     SLD+ GC
Sbjct: 786  P----NLSMATSLETLNLNNCSSLVELTL----------STIQNLNKLT----SLDMIGC 827

Query: 757  NMLRSLP-ELPL-CLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL 814
            + L +LP  + L  L  LNL  C+ LR  P++   +  L + N   ++ +P  +     L
Sbjct: 828  SSLETLPIGINLKSLYRLNLNGCSQLRGFPDISNNITFLFL-NQTAIEEVPSHINNFSSL 886

Query: 815  DASVLEKLSKHSPDLQWAPESLKSAAICFE--FTNCLKLNGKANNKILADSLLRIRHMAI 872
            +A  LE +     +L+W    L       E  F++C KL     ++   D+ L +     
Sbjct: 887  EA--LEMMG--CKELKWISPGLFELKDLDEVFFSDCKKLGEVKWSEKAEDTKLSVISFT- 941

Query: 873  ASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHS-SCRNLIGF 931
                +  E+ I++  S    + ++LPG E+P +F+++S+G+S+ I L   S S +  + F
Sbjct: 942  NCFYINQEIFIHQSAS----NYMILPG-EVPPYFTHRSTGNSLTIPLHHSSLSQQPFLDF 996

Query: 932  AFCAVLDSKKVDSD------CFRYFYVSFQF-DLEIKTLSETKHVDLGYNSRYIEDLIDS 984
              C V+    V S+      CF    V   F D         +  DL  + +Y   +I  
Sbjct: 997  KACVVVSDLVVGSEAVVKKLCFMDIEVHCHFIDKHGNYFEPAERKDLSVHQKYNHQII-- 1054

Query: 985  DRVILGFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGL 1026
                       +  FP          KF    +  K+KRCG+
Sbjct: 1055 ----------FDCRFPLNLDCDQVQIKFLLPNERLKLKRCGV 1086


>gi|359493388|ref|XP_003634583.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1196

 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 281/863 (32%), Positives = 415/863 (48%), Gaps = 134/863 (15%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S+ V +VGI+G+GGIGKTT+AK +++    +F+   F+ +VR  S+   GL  LQK++L 
Sbjct: 214  SNGVSMVGIYGIGGIGKTTIAKVVYNDMLDQFQRHSFLENVREKSKDDHGLLELQKKLLC 273

Query: 64   TTLSEK-LEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
              L EK L++   N      K + R  K+LIVLDDV+   QLK L    + F QGS I+V
Sbjct: 274  DILMEKNLKLRNINDGIKMVKRKCRIEKVLIVLDDVDCQKQLKFLAPNSECFHQGSIIIV 333

Query: 122  TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVSYTK 180
            TTR+KR L+  +      Y   GL   +A E FC  AF+++H   EDL   S  ++ Y K
Sbjct: 334  TTRNKRCLDVHKSYSS--YEAKGLAHTQAKELFCWNAFQQDHPEYEDL---SNCILDYAK 388

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            G PL L VLGS L  +   +W   LH L     + + DI  +L+IS++ L  + K +FLD
Sbjct: 389  GLPLALVVLGSFLYQRDVDYWESTLHKLKT---NPLEDIQKVLQISYDGLDNKWKELFLD 445

Query: 241  IACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
            IACFF  EDK  V  IL+  +      L +L ++ L+SI+ + + MHD+LQEMG  IVRQ
Sbjct: 446  IACFFRNEDKKVVTRILEGCKFHPKSGLTVLHERCLISITDDTIRMHDLLQEMGWAIVRQ 505

Query: 298  ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS--KIKGINLDPRAFTNMSNLR 355
               + P + SRLW+ ++I  VL  NKGT  IEGI ++ S    K I L   AF  M+ LR
Sbjct: 506  NFPEHPEEWSRLWELQDIKSVLPQNKGTKNIEGISINRSWDSKKRIQLTAEAFRKMNRLR 565

Query: 356  LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
            L K  V                                     Y HWD YPL  LPSNF 
Sbjct: 566  LLKVKV-------------------------------------YFHWDNYPLEYLPSNFH 588

Query: 416  PKNLVELNLRCSKVEQPWEGEKACVP---------------SSIQNFKYLSALSFKGCQS 460
             +N VELNL  S +E  WEG                     S+I + + L  L  KGC  
Sbjct: 589  VENPVELNLWYSNIEHLWEGNMPAKKLKVTDLSYSRHLVDISNISSMQNLETLILKGCTR 648

Query: 461  LRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLY----------LGQSAIEEVPSS 510
            L    + L       ++ S C NL+  P   G +  L           +G + I     +
Sbjct: 649  LLKHLNGLE-----ELDLSNCKNLLSLPDSIGSLNSLQTLDLVECSKLVGFTNI-----N 698

Query: 511  IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI----LEKMEHLK 566
            I  L  LE LDL  C+ L+ +  S   L SL TL+L+GC  L+ FP+I    L+ +E L 
Sbjct: 699  IGSLKALEYLDLSWCENLESLPNSIGSLSSLQTLLLIGCSKLKGFPDINFGSLKALELLD 758

Query: 567  RIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY-----YILAAA-- 619
              +S    +  LP S  NL  L+ L + +C KL+ + +    +++ +     +I  +A  
Sbjct: 759  --FSHCRNLESLPVSIYNLSSLKTLGITNCPKLEEMLEIKLGVDWPFSPLTCHISNSAIT 816

Query: 620  ---------SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY-- 668
                     S++  L     LS+++  L      G+E    +    LS++ +L + ++  
Sbjct: 817  WYDDWHDCFSSLEALNPQCPLSSLVE-LSVRKFYGMEEDILSGSFHLSSLQILSLGNFPS 875

Query: 669  AVREIPQEIAYLSSLEILYLSG--NNFESLPAIIKQMSQLRFIHLEDFNMLQ-------- 718
                I  +I +LSSL  L L+      E +P  I  +S L+ + L D N+++        
Sbjct: 876  VAEGILDKIFHLSSLVKLSLTKCKPTEEGIPGDIWNLSPLQQLSLRDCNLMEGKILNHIC 935

Query: 719  ---SLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLE 775
               SL EL L   +   I   + +        L++LDL+ C  L+ +PELP  L++L+  
Sbjct: 936  HLTSLEELYLGWNHFSSIPAGISRLSN-----LKALDLSHCKNLQQIPELPSSLRFLDAH 990

Query: 776  DCNMLRSLPELPLCLQLLTVRNC 798
              + + S P L   L + ++ NC
Sbjct: 991  CSDGISSSPSL---LPIHSMVNC 1010


>gi|3947735|emb|CAA08798.1| NL27 [Solanum tuberosum]
          Length = 821

 Score =  286 bits (733), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 204/581 (35%), Positives = 292/581 (50%), Gaps = 72/581 (12%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V IVGIWGM G+GKTT+A+AIFD+ S++FE  CF++D++   E   G+  LQ  +LS  L
Sbjct: 219 VLIVGIWGMPGVGKTTIARAIFDRLSYQFEAVCFLADIK---ENKCGMHSLQNILLSELL 275

Query: 67  SEKLEVAG--PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            EK        +       R+R  K+L+VLDD++ + QL  L G LD FG GSRI+ TTR
Sbjct: 276 KEKDNCVNNKEDGRSLLAHRLRFKKVLVVLDDIDHIDQLDYLAGNLDWFGNGSRIIATTR 335

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           DK ++ K       +Y +  L   +A + F  +AFKE    +     +  VVS+ KG PL
Sbjct: 336 DKHLIGK-----NVVYELPTLHDHDAIKLFERYAFKEQVSDKCFKELTLEVVSHAKGLPL 390

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L+V G     +  + W   +  +     SE   I + LKIS++ L    +SIFLDIACF
Sbjct: 391 ALKVFGCFFHERDITEWRSAIKQIKNNPNSE---IVEKLKISYDGLETIQQSIFLDIACF 447

Query: 245 FEGEDKDFVASILD--DSESDV-LDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESE 300
             G  KD+V  IL+  D  +D+ L +LIDKSLVSISG N + MHD++Q+MG+ +V++  +
Sbjct: 448 LRGRRKDYVMQILESCDFGADIGLSVLIDKSLVSISGNNTIEMHDLIQDMGKYVVKK--Q 505

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
           K+PG+RSRLW  K+   V+ +N GT A+E I+  +           A T M  LR+   +
Sbjct: 506 KDPGERSRLWLTKDFEEVMINNTGTKAVEAIW--VPNFNRPRFSKEAMTIMQRLRILCIH 563

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                                    L   ++YLP  LR+  W+ YP  +LP NF+P+ LV
Sbjct: 564 DSNC---------------------LDGSIEYLPNSLRWFVWNNYPCESLPENFEPQKLV 602

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
            L+L  S +   W G+K        +  +L  L  +  +SL   P          ++ SY
Sbjct: 603 HLDLSLSSLHHLWTGKK--------HLPFLQKLDLRDSRSLMQTPDFTWMPNLKYLDLSY 654

Query: 481 CVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS 540
           C NL                     EV  S+    +L  L+L  C RLKR       + S
Sbjct: 655 CRNL--------------------SEVHHSLGYSRELIELNLYNCGRLKRFPC--VNVES 692

Query: 541 LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
           L  + L  C +LE FP I   M+   +I    + I ELPSS
Sbjct: 693 LDYMDLEFCSSLEKFPIIFGTMKPELKIKMGLSGIKELPSS 733


>gi|224127242|ref|XP_002329435.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870485|gb|EEF07616.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 909

 Score =  286 bits (733), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 235/701 (33%), Positives = 336/701 (47%), Gaps = 140/701 (19%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQ-- 58
           M+S D V IVGIWGMGGIGK+T+A+A+ ++    FEG  F ++ R  S+           
Sbjct: 26  MESPD-VLIVGIWGMGGIGKSTIAEAVCNKVRSRFEG-IFFANCRQQSDLRRRFLKRLLG 83

Query: 59  KQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKR----LIGELDQFG 114
           ++ L+T  S     +      F ++R+RR+K+ IVLDDV+    L+     L G    FG
Sbjct: 84  QETLNTMGSLSFRDS------FVRDRLRRIKVFIVLDDVDNSMALEEWRDLLDGRNSSFG 137

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFK-------ENHCPED 167
            GS++++T+RDK+VL     E    Y+V GL +E+A + F + A K       + H  E 
Sbjct: 138 PGSKVLITSRDKQVLSNIVDE---TYKVEGLNYEDAIQLFNSKALKICIPTIDQRHLIEQ 194

Query: 168 LNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISF 227
           + WH R       GNPL L+VLGSSL  K    W   L  L     ++   I   L+IS+
Sbjct: 195 IAWHVR-------GNPLALKVLGSSLYGKSIEEWRSALKKL-----AQDPQIERALRISY 242

Query: 228 NKLTPRVKSIFLDIACFFEGEDKDFVASILD--DSESDVLDI--LIDKSLVSISGNFLNM 283
           + L    KSIFLDIA FF     +    ILD     S + DI  LIDK L++   N + M
Sbjct: 243 DGLDSEQKSIFLDIAHFFNRMKPNEATRILDCLYGRSVIFDISTLIDKCLITTFYNNIRM 302

Query: 284 HDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGIN 342
           HD+LQEM   IVR ES+  PG+RSRL  P ++ +VL+ NKGT  I+GI L    + + I+
Sbjct: 303 HDLLQEMAFNIVRAESDF-PGERSRLCHPPDVVQVLEENKGTQKIKGISLSTFMLSRQIH 361

Query: 343 LDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHW 402
           L   AF  M  LR   F         +  ++S E+++       P GL+YLP KLRYL W
Sbjct: 362 LKSDAFAMMDGLRFLNF---------RQHTLSMEDKMHLP----PTGLEYLPNKLRYLKW 408

Query: 403 DTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKAC----------------------- 439
             +P ++LP +F+ + LVEL+L  +K+ + W G +                         
Sbjct: 409 CGFPSKSLPPSFRTERLVELHLCNNKLVKLWTGVQDVGNLRTIDLSDSPYLTELPDLSMA 468

Query: 440 ----------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV------------ 471
                           VPSS+Q    L  +    C +LRSFP     V            
Sbjct: 469 KNLQCLRLAKCSSLTEVPSSLQYLDKLEEIDLFSCYNLRSFPMLDSKVLRKLVISRCLDV 528

Query: 472 --CP-VTINFSY--------------------------CVNLIEFPQISGKVTRLYLGQS 502
             CP ++ N  +                          C  + +FP+ISG + RL L  +
Sbjct: 529 TKCPTISQNMVWLQLEQTSIKEVPQSVTSKLERLCLNGCPEITKFPEISGDIERLELKGT 588

Query: 503 AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP-EILEK 561
            I+EVPSSI+ LT L  LD+ GC +L+        ++SLV L  L    ++  P    + 
Sbjct: 589 TIKEVPSSIQFLTRLRDLDMSGCSKLESFPEITGPMKSLVELN-LSKTGIKKIPSSSFKH 647

Query: 562 MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNL 602
           M  L+R+  D TPI ELP   E  P L +L   DC+ L+ +
Sbjct: 648 MISLRRLKLDGTPIKELP---ELPPSLWILTTHDCASLETV 685



 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 127/523 (24%), Positives = 205/523 (39%), Gaps = 128/523 (24%)

Query: 561  KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAAS 620
            + E L  ++     + +L +  +++  L  + + D   L  LPD   +       LA  S
Sbjct: 421  RTERLVELHLCNNKLVKLWTGVQDVGNLRTIDLSDSPYLTELPDLSMAKNLQCLRLAKCS 480

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFP-------RTFLLGL-----------SAMGL 662
            +++++PSS+   + L  +D   C  L SFP       R  ++               M  
Sbjct: 481  SLTEVPSSLQYLDKLEEIDLFSCYNLRSFPMLDSKVLRKLVISRCLDVTKCPTISQNMVW 540

Query: 663  LHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLP 721
            L +   +++E+PQ +   S LE L L+G       P I   + +L            ++ 
Sbjct: 541  LQLEQTSIKEVPQSVT--SKLERLCLNGCPEITKFPEISGDIERLELKG-------TTIK 591

Query: 722  ELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPEL--PL-CLQYLNLE--- 775
            E+P  +++L                 L  LD++GC+ L S PE+  P+  L  LNL    
Sbjct: 592  EVPSSIQFLTR---------------LRDLDMSGCSKLESFPEITGPMKSLVELNLSKTG 636

Query: 776  --------------------DCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELD 815
                                D   ++ LPELP  L +LT  +C  L+++  I+       
Sbjct: 637  IKKIPSSSFKHMISLRRLKLDGTPIKELPELPPSLWILTTHDCASLETVISII------- 689

Query: 816  ASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASL 875
                                ++S     +FTNC KL+ K         L+   H+ I S 
Sbjct: 690  -------------------KIRSLWDVLDFTNCFKLDQKP--------LVAAMHLKIQS- 721

Query: 876  RLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCA 935
                     +K+    G  +VLPGSEIP+WF  +  GSS+ +QLP  S+C  L G AFC 
Sbjct: 722  --------GDKIPH-GGIKMVLPGSEIPEWFGEKGIGSSLTMQLP--SNCHQLKGIAFCL 770

Query: 936  V----LDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIE--------DLID 983
            V    L S  +       F V F+FD  +K+ +     D       +E           D
Sbjct: 771  VFLLPLPSHDMPYKVDDLFPVEFRFDYHVKSKNGEHDGDDEVVLVSMEKCALTCNMKTCD 830

Query: 984  SDRVILGFK-PCLNVGFPDGYHHTIATFKFFAERKFYKIKRCG 1025
            SD ++L ++   + V F   Y     TFKF+ +      +R G
Sbjct: 831  SDHMVLHYELENILVYFLRKYSGNEVTFKFYHQEVDNMARRVG 873


>gi|356517237|ref|XP_003527295.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1098

 Score =  286 bits (733), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 229/702 (32%), Positives = 357/702 (50%), Gaps = 87/702 (12%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           + V +VGI GMGGIGK+TL ++++++ SH F   C++ DV       G L  +QKQ+LS 
Sbjct: 216 NDVPVVGITGMGGIGKSTLGRSLYERISHRFNSCCYIDDVSKLYRLEGTL-GVQKQLLSQ 274

Query: 65  TLSEK-LEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF-----GQGS 117
           +L+E+ LE+    +      +R+   K LIVLD+V++  QL    G  +       G+GS
Sbjct: 275 SLNERNLEICNVCDGTLLAWKRLPNAKALIVLDNVDQDKQLDMFTGGRNDLLRKCLGKGS 334

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            +++ +RD+++L K  G +  IY+V  L   +A + FC  AFK N+   D    +  V+S
Sbjct: 335 IVIIISRDQQIL-KAHGVDV-IYQVEPLNDNDALQLFCKKAFKNNYIMSDFEKLTSDVLS 392

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           + +G+PL +EV+GS L  K  SHW   L  L    E++   I ++L+ISF++L    K I
Sbjct: 393 HCQGHPLAIEVIGSYLFDKDFSHWRSALVSLR---ENKSKSIMNVLRISFDQLEDTHKEI 449

Query: 238 FLDIACFFEGEDKDFVASILD----DSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQ 293
           FLDIACFF  +D ++V  +LD    + E D L +L+DKSL+++    + MHD+L ++G+ 
Sbjct: 450 FLDIACFFNDDDVEYVKEVLDFRGFNPEYD-LQVLVDKSLITMDEE-IGMHDLLCDLGKY 507

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFL----DLSKIKGINLDPRAFT 349
           IVR++S ++P K SRLWD K+  +V+  NK  + +E I +    D+ + + + +D  A +
Sbjct: 508 IVREKSPRKPWKWSRLWDIKDFHKVMSDNKVAENVEVIIIEDPYDILRTRTMRVD--ALS 565

Query: 350 NMSNLRLFKF-YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
            MS+L+L    Y    +EI                      L  L  +L YL W+ YP  
Sbjct: 566 TMSSLKLLYLGYWNVGFEI-----------------NFSGTLAKLSNELGYLSWEKYPFE 608

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFK-----------------YLS 451
            LP +F+P  LVEL L  S ++Q WEG K  +P+++++                   YL 
Sbjct: 609 CLPPSFEPDKLVELRLPYSNIKQLWEGTKP-LPNNLRHLNLSGSKNLIKMPYIGDALYLE 667

Query: 452 ALSFKGCQSLRSFPSNLHFVCPVT-INFSYCVNLIEFPQISGKVTRLYL---GQSAIEEV 507
           +L  +GC  L     ++     +T +N   C +LI+ P+    +    L   G   +  +
Sbjct: 668 SLDLEGCIQLEEIGLSVVLSRKLTSLNLRNCKSLIKLPRFGEDLILKNLDLEGCKKLRHI 727

Query: 508 PSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC---LNLEHFPEILEKMEH 564
             SI  L  LE L+L+ CK L  +  S   L SL  LIL GC    N E F E L   E 
Sbjct: 728 DPSIGLLKKLEYLNLKNCKNLVSLPNSILGLNSLQYLILSGCSKLYNTELFYE-LRDAEQ 786

Query: 565 LKRIYSDRTPIT-ELPSSFEN---------------LPGLEVLFVEDCSKLDNLPDNIGS 608
           LK+I  D  PI  +  SS+                  P +  L +  C+ L  +PD IG 
Sbjct: 787 LKKIDIDGAPIHFQSTSSYSRQHQKSVSCLMPSSPIFPCMSKLDLSFCN-LVEIPDAIGI 845

Query: 609 LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           +  L  +  + +  + LP+   LS ++  L   HCK L+S P
Sbjct: 846 MSCLERLDLSGNNFATLPNLKKLSKLV-CLKLQHCKQLKSLP 886



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 39/206 (18%)

Query: 657 LSAMGLLHISDYAVR---EIPQEIAYLSSLEILYLSGNN--FESLPAIIK--QMSQLRFI 709
           +S++ LL++  + V         +A LS+ E+ YLS     FE LP   +  ++ +LR  
Sbjct: 567 MSSLKLLYLGYWNVGFEINFSGTLAKLSN-ELGYLSWEKYPFECLPPSFEPDKLVELRLP 625

Query: 710 HLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL--PFCLESLDLTGCNML-------- 759
           +     + +    LP  L++L+L   K L  +P +     LESLDL GC  L        
Sbjct: 626 YSNIKQLWEGTKPLPNNLRHLNLSGSKNLIKMPYIGDALYLESLDLEGCIQLEEIGLSVV 685

Query: 760 -------------RSLPELP-----LCLQYLNLEDCNMLRSL-PELPLC--LQLLTVRNC 798
                        +SL +LP     L L+ L+LE C  LR + P + L   L+ L ++NC
Sbjct: 686 LSRKLTSLNLRNCKSLIKLPRFGEDLILKNLDLEGCKKLRHIDPSIGLLKKLEYLNLKNC 745

Query: 799 NRLQSLPEILLCLQELDASVLEKLSK 824
             L SLP  +L L  L   +L   SK
Sbjct: 746 KNLVSLPNSILGLNSLQYLILSGCSK 771



 Score = 43.9 bits (102), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 16/122 (13%)

Query: 727 LKYLHLIDCKMLQSLPVL--PFCLESLDLTGCNMLRSL-PELPLC--LQYLNLEDCNMLR 781
           L  L+L +CK L  LP       L++LDL GC  LR + P + L   L+YLNL++C  L 
Sbjct: 690 LTSLNLRNCKSLIKLPRFGEDLILKNLDLEGCKKLRHIDPSIGLLKKLEYLNLKNCKNLV 749

Query: 782 SLPELPL---CLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKS 838
           SLP   L    LQ L +  C++L +  E+   L+  DA  L+K+     D+  AP   +S
Sbjct: 750 SLPNSILGLNSLQYLILSGCSKLYN-TELFYELR--DAEQLKKI-----DIDGAPIHFQS 801

Query: 839 AA 840
            +
Sbjct: 802 TS 803


>gi|357499537|ref|XP_003620057.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355495072|gb|AES76275.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1060

 Score =  286 bits (733), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 217/607 (35%), Positives = 304/607 (50%), Gaps = 97/607 (15%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S D V +VGI+G+GG+GK+TLA+ I++  + +FEGSCF+ DVR NS     L++LQ+++L
Sbjct: 215 SDDGVHMVGIYGIGGLGKSTLARQIYNFVADQFEGSCFLHDVRENS-AQNNLKYLQEKLL 273

Query: 63  --STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             +T L  KL+     IP   KER+ R K+L++LDDV+ + QL  L G LD FG GSR++
Sbjct: 274 LKTTGLEIKLDHVSEGIP-VIKERLCRKKILLILDDVDNLKQLHALAGGLDWFGCGSRVI 332

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTR+K +L     E    + V GL   EA E     AFK +  P          V+Y  
Sbjct: 333 ITTRNKDLLSSHGIES--THAVEGLNETEALELLRWMAFKSDKVPSGYEDILNRAVAYAF 390

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PLVLEV+GS+L  K    W   L   +RI   EI  I   LK+S++ L    +S+FLD
Sbjct: 391 GLPLVLEVVGSNLFGKSIEDWKHTLDGYDRIPNKEIQKI---LKVSYDALEEEEQSVFLD 447

Query: 241 IACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISG-------NFLNMHDILQE 289
           IAC F+G    E +D + +  D   +  L +L  KSLV IS        N + +HD++++
Sbjct: 448 IACCFKGYQWKEFEDILCAHYDHCITHHLGVLAGKSLVKISTYYPSGSINDVRLHDLIKD 507

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAF 348
           MG+++VRQES KEPG+RSRLW  ++I  VLK N GT  IE I+++L  ++  I+   +AF
Sbjct: 508 MGKEVVRQESPKEPGERSRLWRQEDIIHVLKENTGTSKIEMIYMNLHSMESVIDKKGKAF 567

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M+                KL ++  E  L         GL YLP  LR L W     +
Sbjct: 568 KKMT----------------KLKTLIIENGL------FSGGLKYLPSSLRVLKWKGCLSK 605

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQN--FKYLSALSFKGCQSLRSFPS 466
                                         C+ SSI N  F+ +  L+   C+ L   P 
Sbjct: 606 ------------------------------CLSSSILNKKFQNMKVLTLDYCEYLTHIPD 635

Query: 467 NLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCK 526
                    ++F+ C NLI                     + +SI  L  LE L   GC+
Sbjct: 636 VSGLSNLEKLSFTCCDNLI--------------------TIHNSIGHLNKLEWLSAYGCR 675

Query: 527 RLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLP 586
           +L+        L SL  LIL  C  L++FPE+L KM H+K I    T I ELP SF+NL 
Sbjct: 676 KLEHFRP--LGLASLKKLILYECECLDNFPELLCKMAHIKEIDISNTSIGELPFSFQNLS 733

Query: 587 GLEVLFV 593
            L  L V
Sbjct: 734 ELHELTV 740


>gi|356502323|ref|XP_003519969.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1028

 Score =  286 bits (731), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 222/635 (34%), Positives = 315/635 (49%), Gaps = 98/635 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPN-- 76
           KTT+++A+++    +FEG+CF+ D+R  +    GL  LQ+ +LS  L +K ++V   N  
Sbjct: 228 KTTISRAVYNLICSQFEGTCFLLDIREKAINKQGLVQLQEMLLSEVLKKKHIKVGDVNRG 287

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           IP   K R+ + K+L+VLDDV+++ QLK L GE   FG GS I++TTRDK +L       
Sbjct: 288 IP-IIKRRLEKKKVLLVLDDVDKLEQLKVLAGESRWFGNGSIIIITTRDKHLLATHG--V 344

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHC-PEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
            KIY V  L   +A E F   AFK +   P  +N  +R+V SY  G PL LEV+GS L  
Sbjct: 345 VKIYDVKPLNVAKALELFNWCAFKNHKADPLYVNIANRAV-SYACGIPLALEVIGSHL-- 401

Query: 196 KRKSHWGKVLHDLNRICESEI---------------------HDIYDILKISFNKLTPRV 234
                +GK L++ N   E E                        I++ILK+S++ L    
Sbjct: 402 -----FGKSLNECNSALEGEPCLWAMGYECNSALDKYERIPHEKIHEILKVSYDGLEENE 456

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSI-SGNFLNMHDILQEM 290
           K IFLDIACFF      +V S+L        D L +L+D+SL+ I +   + MHD++++ 
Sbjct: 457 KQIFLDIACFFNTCGVGYVTSVLRAHGFHVKDGLRVLVDRSLLKIDASGCVRMHDLIRDT 516

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
           GR+IVRQES  EPG+RSRLW  ++I  VL+ N GTD IE I L+      +  + +A   
Sbjct: 517 GREIVRQESTVEPGRRSRLWFEEDIVHVLEENTGTDKIEFIKLEGYNNIQVQWNGKALKE 576

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M NLR+                    E  ++S      G ++LP  LR L W  YP  +L
Sbjct: 577 MKNLRILII-----------------ENTTFS-----TGPEHLPNSLRVLDWSCYPSPSL 614

Query: 411 PSNFKPKNLVELNL---RCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSN 467
           P++F PK  VEL L    C ++ QP+             F+ LS LS + CQ L   PS 
Sbjct: 615 PADFNPKR-VELLLMPESCLQIFQPY-----------NMFESLSVLSIEDCQFLTDLPSL 662

Query: 468 LHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKR 527
                   +    C NL+                    ++  SI  L  L++L  + C +
Sbjct: 663 REVPLLAYLCIDNCTNLV--------------------KIDGSIGFLDKLQLLSAKRCSK 702

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
           LK I      L SL  L L GC  L+ FPE+L KME++K IY D T I  LP S  N  G
Sbjct: 703 LK-ILAPCVMLPSLEILDLRGCTCLDSFPEVLGKMENIKEIYLDETAIETLPCSIGNFVG 761

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAI 622
           L++L +  C +L  LP +I  L  +  I      +
Sbjct: 762 LQLLSLRKCGRLHQLPGSICILPKVKVIFGFGHVV 796


>gi|15810375|gb|AAL07075.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 695

 Score =  286 bits (731), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 223/652 (34%), Positives = 327/652 (50%), Gaps = 87/652 (13%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE 68
           ++GIWG  GIGKTT+A+A+F+Q    F  SCF+ ++  N+  +     L   +LS  L++
Sbjct: 1   MIGIWGPAGIGKTTIARALFNQLFTGFRHSCFMGNIDVNNYDSK--LRLHNMLLSKILNQ 58

Query: 69  KLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
           K       I H    +E +R  ++LIVLDDV+++ QL+ L  E   FG GSR++VT +DK
Sbjct: 59  K----DMKIHHLGAIEEWLRNQRVLIVLDDVDDLEQLEVLAKESFWFGPGSRVIVTLKDK 114

Query: 127 RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVL 186
           ++L      +  IY V+    ++A E FC  AFK++   +     +R VV      PL L
Sbjct: 115 KILMAHGIND--IYHVDYPSQKKALEIFCLSAFKQSSPQDGFEELARKVVELCGNLPLAL 172

Query: 187 EVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFE 246
            V+GSS   + +  W   L+ +    + +I  +   L++ ++KL  + +S+FL IACFF 
Sbjct: 173 RVVGSSFYGESEDEWRLQLYGIETNLDRKIEHV---LRVGYDKLLEKHQSLFLHIACFFN 229

Query: 247 GEDKDFVASILDDSESDV---LDILIDKSLVSISGN-FLNMHDILQEMGRQIVRQESEKE 302
            E  D+V+++L DS  DV   L  L  KSLV IS +  + MH +LQ++GRQ+V Q+S  E
Sbjct: 230 HESVDYVSTMLADSTLDVENGLKTLAAKSLVHISTHGLVRMHCLLQQLGRQVVVQQS-GE 288

Query: 303 PGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVP 362
           PGKR  L + KEI  VL +  GT +I GI  D+SKI   ++  R F  M NL+  KFY  
Sbjct: 289 PGKRQFLVEAKEIRDVLANETGTGSIIGISFDMSKIGEFSIRKRVFEGMHNLKFLKFY-- 346

Query: 363 KFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
                                V L   + YLP +LR LHWD+YP + LP  F+P+ LVEL
Sbjct: 347 ------------------NGNVSLLEDMKYLP-RLRLLHWDSYPRKRLPLTFQPECLVEL 387

Query: 423 NLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
            L  SK+E+ W G +      + N K                           IN  Y  
Sbjct: 388 YLVSSKLEKLWGGIQP-----LTNLK--------------------------KINLEYSS 416

Query: 483 NLIEFPQISGKVTRL----YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
           NL E P +S K T L      G  ++ E+PSSI  L  LEVLD  GC +L  I T    L
Sbjct: 417 NLKEIPNLS-KATNLETLRLTGCESLMEIPSSISNLHKLEVLDASGCSKLHVIPTKI-NL 474

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR-TPITELPSSFENLPGLEVLFVEDCS 597
            SL  + +  C  L  FP+I   +    +I S R T I E P+S     G+ ++      
Sbjct: 475 SSLKMVGMDDCSRLRSFPDISTNI----KILSIRGTKIKEFPASIVGGLGILLIGSRSLK 530

Query: 598 KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
           +L ++P+++       Y+  + S I  +P  V     L+ L   +C+ L S 
Sbjct: 531 RLTHVPESVS------YLDLSHSDIKMIPDYVIGLPHLQHLTIGNCRKLVSI 576



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 173/415 (41%), Gaps = 100/415 (24%)

Query: 558 ILEKMEHLKRI---YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
           +LE M++L R+   + D  P   LP +F+    +E+  V   SKL+ L   I  L  L  
Sbjct: 352 LLEDMKYLPRLRLLHWDSYPRKRLPLTFQPECLVELYLVS--SKLEKLWGGIQPLTNLKK 409

Query: 615 I-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
           I L  +S + ++P+    +N L +L  + C+ L                         EI
Sbjct: 410 INLEYSSNLKEIPNLSKATN-LETLRLTGCESL------------------------MEI 444

Query: 674 PQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
           P  I+ L  LE+L  SG +    +P  I  +S L+ + ++D + L+S P++   +K L +
Sbjct: 445 PSSISNLHKLEVLDASGCSKLHVIPTKI-NLSSLKMVGMDDCSRLRSFPDISTNIKILSI 503

Query: 733 IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCL-- 790
              K ++  P        + L G   L+ L  +P  + YL+L   + ++ +P+  + L  
Sbjct: 504 RGTK-IKEFPASIVGGLGILLIGSRSLKRLTHVPESVSYLDLSHSD-IKMIPDYVIGLPH 561

Query: 791 -QLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQ----WAPESLKSAAICF-- 843
            Q LT+ NC +L S+                    HSP L+    +   SL+S    F  
Sbjct: 562 LQHLTIGNCRKLVSI------------------EGHSPSLESIVAYRCISLESMCCSFHR 603

Query: 844 -----EFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLP 898
                EF NCLKL+ ++  +I+  S  RI                           I L 
Sbjct: 604 PILKLEFYNCLKLDNESKRRIILHSGHRI---------------------------IFLT 636

Query: 899 GSEIPDWFSNQSSGSSICIQLPPHSSCRNLIG--FAFCAVLDSKK----VDSDCF 947
           G+E+P  F++Q+ G+SI I L P       +   F  C VL   K     D +CF
Sbjct: 637 GNEVPAQFTHQTRGNSITISLSPGGEESFSVSSRFRACLVLSPSKNSPYSDINCF 691


>gi|17381122|gb|AAL36373.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 876

 Score =  285 bits (730), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 223/652 (34%), Positives = 327/652 (50%), Gaps = 87/652 (13%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE 68
           ++GIWG  GIGKTT+A+A+F+Q    F  SCF+ ++  N+  +     L   +LS  L++
Sbjct: 1   MIGIWGPAGIGKTTIARALFNQLFTGFRHSCFMGNIDVNNYDSK--LRLHNMLLSKILNQ 58

Query: 69  KLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
           K       I H    +E +R  ++LIVLDDV+++ QL+ L  E   FG GSR++VT +DK
Sbjct: 59  K----DMKIHHLGAIEEWLRNQRVLIVLDDVDDLEQLEVLAKESFWFGPGSRVIVTLKDK 114

Query: 127 RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVL 186
           ++L      +  IY V+    ++A E FC  AFK++   +     +R VV      PL L
Sbjct: 115 KILMAHGIND--IYHVDYPSQKKALEIFCLSAFKQSSPQDGFEELARKVVELCGNLPLAL 172

Query: 187 EVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFE 246
            V+GSS   + +  W   L+ +    + +I  +   L++ ++KL  + +S+FL IACFF 
Sbjct: 173 RVVGSSFYGESEDEWRLQLYGIETNLDRKIEHV---LRVGYDKLLEKHQSLFLHIACFFN 229

Query: 247 GEDKDFVASILDDSESDV---LDILIDKSLVSISGN-FLNMHDILQEMGRQIVRQESEKE 302
            E  D+V+++L DS  DV   L  L  KSLV IS +  + MH +LQ++GRQ+V Q+S  E
Sbjct: 230 HESVDYVSTMLADSTLDVENGLKTLAAKSLVHISTHGLVRMHCLLQQLGRQVVVQQS-GE 288

Query: 303 PGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVP 362
           PGKR  L + KEI  VL +  GT +I GI  D+SKI   ++  R F  M NL+  KFY  
Sbjct: 289 PGKRQFLVEAKEIRDVLANETGTGSIIGISFDMSKIGEFSIRKRVFEGMHNLKFLKFY-- 346

Query: 363 KFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
                                V L   + YLP +LR LHWD+YP + LP  F+P+ LVEL
Sbjct: 347 ------------------NGNVSLLEDMKYLP-RLRLLHWDSYPRKRLPLTFQPECLVEL 387

Query: 423 NLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
            L  SK+E+ W G +      + N K                           IN  Y  
Sbjct: 388 YLVSSKLEKLWGGIQP-----LTNLK--------------------------KINLEYSS 416

Query: 483 NLIEFPQISGKVTRL----YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
           NL E P +S K T L      G  ++ E+PSSI  L  LEVLD  GC +L  I T    L
Sbjct: 417 NLKEIPNLS-KATNLETLRLTGCESLMEIPSSISNLHKLEVLDASGCSKLHVIPTKI-NL 474

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR-TPITELPSSFENLPGLEVLFVEDCS 597
            SL  + +  C  L  FP+I   +    +I S R T I E P+S     G+ ++      
Sbjct: 475 SSLKMVGMDDCSRLRSFPDISTNI----KILSIRGTKIKEFPASIVGGLGILLIGSRSLK 530

Query: 598 KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
           +L ++P+++       Y+  + S I  +P  V     L+ L   +C+ L S 
Sbjct: 531 RLTHVPESVS------YLDLSHSDIKMIPDYVIGLPHLQHLTIGNCRKLVSI 576



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 173/415 (41%), Gaps = 100/415 (24%)

Query: 558 ILEKMEHLKRI---YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
           +LE M++L R+   + D  P   LP +F+    +E+  V   SKL+ L   I  L  L  
Sbjct: 352 LLEDMKYLPRLRLLHWDSYPRKRLPLTFQPECLVELYLVS--SKLEKLWGGIQPLTNLKK 409

Query: 615 I-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
           I L  +S + ++P+    +N L +L  + C+ L                         EI
Sbjct: 410 INLEYSSNLKEIPNLSKATN-LETLRLTGCESL------------------------MEI 444

Query: 674 PQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
           P  I+ L  LE+L  SG +    +P  I  +S L+ + ++D + L+S P++   +K L +
Sbjct: 445 PSSISNLHKLEVLDASGCSKLHVIPTKI-NLSSLKMVGMDDCSRLRSFPDISTNIKILSI 503

Query: 733 IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCL-- 790
              K ++  P        + L G   L+ L  +P  + YL+L   + ++ +P+  + L  
Sbjct: 504 RGTK-IKEFPASIVGGLGILLIGSRSLKRLTHVPESVSYLDLSHSD-IKMIPDYVIGLPH 561

Query: 791 -QLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQ----WAPESLKSAAICF-- 843
            Q LT+ NC +L S+                    HSP L+    +   SL+S    F  
Sbjct: 562 LQHLTIGNCRKLVSI------------------EGHSPSLESIVAYRCISLESMCCSFHR 603

Query: 844 -----EFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLP 898
                EF NCLKL+ ++  +I+  S  RI                           I L 
Sbjct: 604 PILKLEFYNCLKLDNESKRRIILHSGHRI---------------------------IFLT 636

Query: 899 GSEIPDWFSNQSSGSSICIQLPPHSSCRNLIG--FAFCAVLDSKK----VDSDCF 947
           G+E+P  F++Q+ G+SI I L P       +   F  C VL   K     D +CF
Sbjct: 637 GNEVPAQFTHQTRGNSITISLSPGGEESFSVSSRFRACLVLSPSKNSPYSDINCF 691


>gi|357499833|ref|XP_003620205.1| Disease resistance protein [Medicago truncatula]
 gi|355495220|gb|AES76423.1| Disease resistance protein [Medicago truncatula]
          Length = 1318

 Score =  285 bits (730), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 288/893 (32%), Positives = 432/893 (48%), Gaps = 132/893 (14%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            +D VQ+VGI G+GGIGKTTLA A+++   H+F+GSCF+  VR NS+   GL HLQK +LS
Sbjct: 206  NDKVQMVGIHGIGGIGKTTLALAVYNSIVHQFQGSCFLEKVRENSD-KNGLIHLQKILLS 264

Query: 64   TTLSEK---LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
              + EK   L      I    K R  + K+L++LDDV++  QL+ + G  D FG+GSR++
Sbjct: 265  QVVGEKNIELTSVRQGISILQK-RFHQKKVLLLLDDVDKEEQLEAIAGRSDWFGRGSRVI 323

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPE-------------D 167
            +TTRDKR+L  + G E+  Y VNGL  ++AFE     AFK    P              D
Sbjct: 324  ITTRDKRLL-TYHGVER-TYEVNGLNDQDAFELVILKAFKNKFSPSYKDALFAQYGSLLD 381

Query: 168  LNWHSR------------------SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLN 209
            +N   R                    +SY  G PL LEV+GS    K        L    
Sbjct: 382  VNKLPRLKAFKTDEVFSGYVHVILRAISYASGLPLALEVIGSHFFNKTIEQCKYALDRYE 441

Query: 210  RICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL----DDSESDVL 265
            RI + +I  I   L++SF+ L    KS+FLDIAC F+G     V  IL    D+   D +
Sbjct: 442  RIPDKKIQTI---LQLSFDALQEEEKSVFLDIACCFKGYKWTRVEQILNAHYDNIMKDHI 498

Query: 266  DILIDKSLV--SISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNK 323
            D+L++KSL+  S+SGN + +HD++++MG++IVRQES ++PGKRSRLW  K+I +VL+ N 
Sbjct: 499  DVLVEKSLIKTSMSGN-VTLHDLIEDMGKEIVRQESPEDPGKRSRLWSSKDIIQVLEENT 557

Query: 324  GTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSK 383
            GT  IE I    S+I+ +  D  AF  M NLR       +F E  K              
Sbjct: 558  GTSKIE-IICPSSRIE-VEWDEEAFKKMENLRTLIIMDGQFTESPK-------------- 601

Query: 384  VQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG--EKACVP 441
                     LP  LR L    YP   LPS F P+ L    +        W+   +KA   
Sbjct: 602  --------NLPNSLRILEHHLYPSWGLPSQFYPRKLAICKIPSYSTSFAWDDFFKKA--- 650

Query: 442  SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG--------- 492
                 FK +  LSF   +SL   P     V    ++F  CVNLI      G         
Sbjct: 651  ---SKFKNIRVLSFDHHKSLTRIPDISGLVNLEELSFQDCVNLITVDDSVGFLGNLKTLR 707

Query: 493  ----------------KVTRLYLGQ-SAIEEVPSSIECLTD-LEVLDLRGCKRLKRISTS 534
                             +  L L Q S +E  P  ++ L D L+ + +R C +L+ I T 
Sbjct: 708  AMRCIKLRSIPPLKLASLEELDLSQCSCLESFPPVVDGLVDKLKTMTVRSCVKLRSIPT- 766

Query: 535  FCKLRSLVTLILLGCLNLEHFPEILE----KMEHLKRIYSDRTPITELPSSFENLPGLEV 590
              KL SL  L L  C +LE FP +++    K++ L   Y     +  +P     L  LE 
Sbjct: 767  -LKLTSLEELDLSNCFSLESFPLVVDGFLGKLKILLVKYCRN--LRSIPPL--RLDSLEK 821

Query: 591  LFVEDCSKLDNLPDNI-GSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
            L +  C  L++ P  + G L+ L ++ +     ++ +P S+ L+++ R  + SHC  LE 
Sbjct: 822  LDLSHCYSLESFPTVVDGLLDKLKFLSMEHCVKLTSIP-SLRLTSLER-FNLSHCLSLER 879

Query: 649  FPRTFLLG-LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL---PAIIKQMS 704
            FP+  +LG ++ +  +H+ +  ++E+P     L+  + LY        L    A++ +++
Sbjct: 880  FPK--ILGEMNNITEIHLDNTLIQELPFPFQNLTPPQTLYQCNCGVVYLSNRAAVMSKLA 937

Query: 705  QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE 764
            +      E  + +QS     +CL+     D + L +  +L   ++ L L+  N  + LP+
Sbjct: 938  EFTIQAEEKVSPMQSSHVEYICLRNCKFSD-EYLSTGLMLFTNVKELHLSD-NQFKILPK 995

Query: 765  -LPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL 814
             +  C  LQ L L++C  L+ +  +P CL+ L+  NC  L S  +  L  QEL
Sbjct: 996  SIEKCHFLQRLVLDNCEELQEIEGIPPCLKTLSALNCKSLTSPCKSKLLNQEL 1048



 Score = 46.6 bits (109), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 16/104 (15%)

Query: 227  FNKLTPRVKSI----FLDIACFFEGEDKDFVASILDDSES----DVLDILIDKSLVSISG 278
            F K  P  + I    FLDI C F+G +   V + L    S    D + + ID+SL+    
Sbjct: 1218 FWKTNPNQRKISRVFFLDIVCCFKGYESIKVQNTLCTHHSYNVKDQIKVPIDESLI---- 1273

Query: 279  NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHN 322
                +HD++++M +++V +ES  E GK  RLW  ++   VL  N
Sbjct: 1274 ----IHDLIEKMAKELVHRESPMESGKCGRLWLLEDTIYVLMEN 1313


>gi|295083331|gb|ADF78119.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  285 bits (730), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 259/794 (32%), Positives = 375/794 (47%), Gaps = 116/794 (14%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V ++GI G+GGIGK+TLA A+++  +  F+GSCF+ D+R  S   G L+HLQ  
Sbjct: 205 VESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREKSNKKG-LQHLQSI 263

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +L   L EK      +E     I H    R++R K+L++LDDV++  QL+ ++G    FG
Sbjct: 264 LLREILGEKEINLASVEQGASIIQH----RLQRKKVLLILDDVDKHEQLQAIVGRPCWFG 319

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK++L       K+ Y V  L    A +     +FK              
Sbjct: 320 PGSRVIITTRDKQLLASHG--VKRTYEVELLNENNALQLLTWKSFKTEKVDPSYKEVLND 377

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV Y  G PL LEV+GS+L  K    W   +    RI   +I    +ILK+SF+ L    
Sbjct: 378 VVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQI---LEILKVSFDALEEEQ 434

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNF------LNMH 284
           K++FLDIAC F   D   V  IL     D +     +L++KSL+    ++      + MH
Sbjct: 435 KNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIVTMH 494

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG---- 340
           D++++MG++IVRQES KEP KRSRLW P++I  VL+ N+GT  IE I LD          
Sbjct: 495 DLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKEEIV 554

Query: 341 INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYL 400
           + L+ +AF  M NL+       KF                        G  YLP  LR L
Sbjct: 555 VELNTKAFKKMKNLKTLIIRNGKF----------------------SKGPKYLPNNLRVL 592

Query: 401 HWDTYPLRTLPSNFKPKNLV--ELNLRC-SKVEQPWEGEKACVPSSIQNFKYLSALSFKG 457
            W  YP   LPS+F PK L   +L   C S VE         +    + F  L  L+F  
Sbjct: 593 EWWRYPSHCLPSDFHPKKLAICKLPFSCISSVE---------LDGLWKMFVNLRILNFDR 643

Query: 458 CQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDL 517
           C+ L   P           +F  C NLI                     V +SI  L  L
Sbjct: 644 CEGLTQIPDVSGLPNLEEFSFECCFNLI--------------------TVHNSIGFLDKL 683

Query: 518 EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
           ++L+   CKRL+       KL SL  L L  C +LE FP+IL KME+++++    + ITE
Sbjct: 684 KILNAFRCKRLRSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITE 741

Query: 578 LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
           LP SF+NL GL                    LE L+    +   I ++PSS+ L   L  
Sbjct: 742 LPFSFQNLAGLR------------------GLELLFL---SPHTIFKVPSSIVLMPELTV 780

Query: 638 LDSSHCKGL------ESFPRTFLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLS 689
           + +   KG       E   +T  +  S + +L +S   + +     +  + + ++ L LS
Sbjct: 781 IRALGLKGWQWLKQEEGEEKTGSIVSSMVEMLTVSSCNLCDEFFSIDFTWFAHMKELCLS 840

Query: 690 GNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLE 749
            NNF  LP  IK+   LR + + D   L+ +  +P  LK+   I+CK L S  +  F  +
Sbjct: 841 ENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLKHFFAINCKSLTSSSISKFLNQ 900

Query: 750 SLDLTGCNMLRSLP 763
            L   G N +  LP
Sbjct: 901 ELHEAG-NTVFCLP 913



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 147/347 (42%), Gaps = 69/347 (19%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +T++P     LP LE    E C  L  + ++IG L+ L  + A      +    + L++ 
Sbjct: 647 LTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPIKLTS- 704

Query: 635 LRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIP---QEIAYLSSLEILYLSG 690
           L  L+ S C  LESFP+  +LG +  +  L +S+ ++ E+P   Q +A L  LE+L+LS 
Sbjct: 705 LEKLNLSFCYSLESFPK--ILGKMENIRQLCLSESSITELPFSFQNLAGLRGLELLFLSP 762

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLES 750
           +    +P+ I  M +L  I        Q L +           +    ++  ++   +E 
Sbjct: 763 HTIFKVPSSIVLMPELTVIRALGLKGWQWLKQ-----------EEGEEKTGSIVSSMVEM 811

Query: 751 LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
           L ++ CN         LC ++ ++ D      + EL L     T+        LPE   C
Sbjct: 812 LTVSSCN---------LCDEFFSI-DFTWFAHMKELCLSENNFTI--------LPE---C 850

Query: 811 LQELD-ASVLEKLS-KHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIR 868
           ++E     +L+    KH  +++  P +LK     F   NC  L   + +K L        
Sbjct: 851 IKECQFLRILDVCDCKHLREIRGIPPNLKH----FFAINCKSLTSSSISKFL-------- 898

Query: 869 HMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSI 915
                          N++L E   ++  LPG  IP+WF  QS G SI
Sbjct: 899 ---------------NQELHEAGNTVFCLPGKRIPEWFDQQSRGPSI 930


>gi|295083311|gb|ADF78109.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  285 bits (730), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 255/796 (32%), Positives = 371/796 (46%), Gaps = 120/796 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V ++GI G+GGIGK+TLA A+++  +  F+GSCF+ D+R  S    GL+HLQ  
Sbjct: 205 VESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREKS-NKKGLQHLQSI 263

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +L   L EK      +E     I H    R++R K+L++LDDV++  QL+ ++G    FG
Sbjct: 264 LLREILGEKEINLASVEQGASIIQH----RLQRKKVLLILDDVDKHEQLQAIVGRPCWFG 319

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK++L       K+ Y V  L    A +     +FK              
Sbjct: 320 PGSRVIITTRDKQLLASHGV--KRTYEVELLNENNALQLLTWKSFKTEKVDPSYKEVLND 377

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV Y  G PL LEV+GS+L  K    W   +    RI   +I    +ILK+SF+ L    
Sbjct: 378 VVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQI---LEILKVSFDALEEEQ 434

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNF------LNMH 284
           K++FLDIAC F   D   V  IL     D +     +L++KSL+    ++      + MH
Sbjct: 435 KNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIVTMH 494

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG---- 340
           D++++MG++IVRQES KEP KRSRLW P++I  VL+ N+GT  IE I LD          
Sbjct: 495 DLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKEEIV 554

Query: 341 INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYL 400
           + L+ +AF  M NL+       KF                        G  YLP  LR L
Sbjct: 555 VELNTKAFKKMKNLKTLIIRNGKF----------------------SKGPKYLPNNLRVL 592

Query: 401 HWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPS-----SIQNFKYLSALSF 455
            W  YP   LPS+F PK L    L  S           C+ S       + F  L  L+F
Sbjct: 593 EWWRYPSHCLPSDFHPKKLAICKLPFS-----------CISSFELDGVWKMFVNLRILNF 641

Query: 456 KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT 515
             C+ L   P           +F  C NLI                     V +SI  L 
Sbjct: 642 DRCEGLTQIPDVSGLPNLEEFSFECCFNLI--------------------TVHNSIGFLD 681

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
            L++L+   CKRL+       KL SL  L L  C +LE FP+IL KME++++++   + I
Sbjct: 682 KLKILNAFRCKRLRSFPP--IKLTSLEKLNLSCCYSLESFPKILGKMENIRQLWLSESSI 739

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
           TELP SF+NL GL                    LE L+    +   I ++PSS+ L   L
Sbjct: 740 TELPFSFQNLAGLR------------------GLELLFL---SPHTIFKVPSSIVLMPEL 778

Query: 636 RSLDSSHCKGLESFPR--------TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
             + +   KG +   +        + +     M  + I + +      +  + + ++ L 
Sbjct: 779 TVIRALGLKGWQWLKQEEGEEKTGSIVSSKVEMLTVAICNLSDEFFSIDFTWFAHMKELC 838

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC 747
           LS NNF  LP  IK+   LR + + D   L+ +  +P  LK+   I+CK L S  +  F 
Sbjct: 839 LSENNFTILPECIKECQFLRKLDVCDCKHLREIRGIPPNLKHFFAINCKSLTSSSIRKFL 898

Query: 748 LESLDLTGCNMLRSLP 763
            + L   G N +  LP
Sbjct: 899 NQELHEAG-NTVFCLP 913



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 138/345 (40%), Gaps = 65/345 (18%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +T++P     LP LE    E C  L  + ++IG L+ L  + A      +    + L++ 
Sbjct: 647 LTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPIKLTS- 704

Query: 635 LRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIP---QEIAYLSSLEILYLSG 690
           L  L+ S C  LESFP+  +LG +  +  L +S+ ++ E+P   Q +A L  LE+L+LS 
Sbjct: 705 LEKLNLSCCYSLESFPK--ILGKMENIRQLWLSESSITELPFSFQNLAGLRGLELLFLSP 762

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLES 750
           +    +P+ I  M +L  I        Q L +     K   ++  K+           E 
Sbjct: 763 HTIFKVPSSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSKV-----------EM 811

Query: 751 LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
           L +  CN+      +         E C    +   LP C     ++ C  L+ L ++  C
Sbjct: 812 LTVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILPEC-----IKECQFLRKL-DVCDC 865

Query: 811 LQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHM 870
                        KH  +++  P +LK     F   NC  L   +  K L          
Sbjct: 866 -------------KHLREIRGIPPNLKH----FFAINCKSLTSSSIRKFL---------- 898

Query: 871 AIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSI 915
                        N++L E   ++  LPG  IP+WF  QS G SI
Sbjct: 899 -------------NQELHEAGNTVFCLPGKRIPEWFDQQSRGPSI 930


>gi|357515237|ref|XP_003627907.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|357515241|ref|XP_003627909.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355521929|gb|AET02383.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355521931|gb|AET02385.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1110

 Score =  285 bits (730), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 268/864 (31%), Positives = 388/864 (44%), Gaps = 113/864 (13%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S  ++++GI+GMGGIGKTTLA+A+F+  S +F+  CF+ DVR NS   G L HLQ+ +L
Sbjct: 217 GSHGLKLLGIYGMGGIGKTTLARAVFNFISPQFDAFCFLEDVRENSANHG-LVHLQQTLL 275

Query: 63  STTLSEKLEVAGPNIPHFT------KERVRRMKLLIVLDDVNEVGQLKRLIGE-LDQFGQ 115
           +T   +K +     +   +      K  + R K+L+VLDDVN   QL+  +G  LD FG 
Sbjct: 276 ATLAGQKKKKKDFQLASISEGLLLLKNMLHRKKVLLVLDDVNSSDQLQATLGRGLDTFGY 335

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHC-PEDLNWHSRS 174
           G+ I++TTRDK  L          Y+V  L  +E+ E     AFK N   P+ ++  +R 
Sbjct: 336 GTTIIITTRDKHFLTTH--GVHTTYKVEELTKDESLELLSWNAFKTNKIYPDYIDLLNR- 392

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           V +   G PL LEV+GS L  K    W   L    +I      DI  ILK ++N L   +
Sbjct: 393 VTTCASGLPLALEVIGSYLHGKGVKEWESALDSYEKIPSK---DIQTILKQTYNALDGDL 449

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDVLD-----ILIDKSLVSIS-GNFLNMHDILQ 288
           + +FLDIACFF+G +   V  +L               L++ SL+ I   N + MHD+++
Sbjct: 450 RQLFLDIACFFKGYELSEVEYLLSAHHGYCFKPHRFRFLLETSLIKIDEHNHVKMHDLIR 509

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRA 347
           +M R+IVRQES   PGKRSRLW   +I  VL+ N GT  I+ I LD  +  K +  D +A
Sbjct: 510 DMAREIVRQESPDHPGKRSRLWLTTDIVEVLEKNTGTSEIQTIVLDFPRYEKMVRWDGKA 569

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F  M+ L                      + L    +    G   LP  LR L W  YP 
Sbjct: 570 FQKMTGL----------------------QTLIIRSLCFAEGPKNLPNSLRVLEWWGYPS 607

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSN 467
           ++LPS F PK L  L L                P S       S +S +  +S +     
Sbjct: 608 QSLPSYFYPKKLAVLKL----------------PHS-------SFMSLELSKSKK----- 639

Query: 468 LHFVCPVTINFSYCVNLIEFPQISG--KVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRG 524
             FV    +NF  C  +   P +SG   + RL L     + E+  S+  L  LE+L+L  
Sbjct: 640 --FVNMTLLNFDECKIITHIPDVSGAPNLERLSLDSCENLVEIHDSVGFLDKLEILNLGS 697

Query: 525 CKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
           C +L+ +      L SL  L L  C +L  FPEIL  M+++  +  + T I E P S  N
Sbjct: 698 CAKLRNLPP--IHLTSLQHLNLSHCSSLVSFPEILGNMKNITSLSLEYTAIREFPYSIGN 755

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
           LP L+ L +  C  L      I   E     +     +            + S  SS+ K
Sbjct: 756 LPRLKSLELHGCGNLLLPSSIILLSELEELSIWQCEGLKSYKQDKG-PEKVGSTVSSNVK 814

Query: 645 GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
            +E F              +ISD  +R     +++ S++  L LS N F  LP  IK+  
Sbjct: 815 YIEFFS------------CNISDDFIR---IGLSWFSNVVELNLSANTFTVLPTCIKECR 859

Query: 705 QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE 764
            L  + L+    L+ +  +P  L+    I C    SL  L      +    C  LR L  
Sbjct: 860 FLTILILDYCRQLREIRGIPPNLEIFSAIRC---TSLNDLDLTNLLVSTKVCCPLRELV- 915

Query: 765 LPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKL-- 822
                    L+DC  L+ +  +P  ++LL+ RNC  L      +L +QEL  +  +    
Sbjct: 916 ---------LDDCESLQEIRGIPPSIELLSARNCRSLTISCRRMLLIQELHEAGNKSFCL 966

Query: 823 -SKHSPDLQWAPESLKSAAICFEF 845
                PD  W     K  +I F F
Sbjct: 967 PGTQMPD--WFEHRSKGHSISFWF 988


>gi|356503065|ref|XP_003520332.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1047

 Score =  285 bits (730), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 201/592 (33%), Positives = 293/592 (49%), Gaps = 67/592 (11%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE 68
           I+GIWGMGG GKTT AKAI++Q    F    F+ D+R   +   G   LQKQ+LS  L  
Sbjct: 219 IIGIWGMGGSGKTTTAKAIYNQIHRSFMDKSFIEDIREACKRDRGQIRLQKQLLSDVLKT 278

Query: 69  KLEVAGPNIPHFTKE-RVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKR 127
           K+E+          E R+ + +LLIVLDDVN+ GQLK L G L   G+GS I++TTRDK 
Sbjct: 279 KVEIHSIGRGTTVIENRLSKKRLLIVLDDVNKSGQLKALCGNLQWIGEGSVIIITTRDKH 338

Query: 128 VLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLE 187
           +    + +   ++ +  +   E+ E     AF+E    ED N  +R+VV+Y  G PL LE
Sbjct: 339 LFTGLKVD--YVHEMKEMHANESLELLSWHAFREAKPKEDFNELARNVVAYCGGLPLALE 396

Query: 188 VLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSIFLDIACFFE 246
            LG  L  +  + W   L  L       + +I   LKISF+ L   + K IFLD+ CFF 
Sbjct: 397 DLGLYLTNRTTNEWRSALSKLETTPNPHVQEI---LKISFDGLNDEKEKDIFLDVCCFFI 453

Query: 247 GEDKDFVASILDDS--ESDV-LDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQESEKE 302
           G+D  +V  IL+     SD  + +LID+SL+ +   N L MH+++QEMGR+I+RQ S K+
Sbjct: 454 GKDIAYVTEILNGCGLHSDCGIPVLIDRSLIKVEKNNKLGMHNLVQEMGREIIRQSSRKK 513

Query: 303 PGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVP 362
           PGKRSRLW   E+  VL  N GT+ +EG+ L             AF  M  LRL      
Sbjct: 514 PGKRSRLWFNVEVVDVLTKNTGTEVVEGLALKFHVNSRNCFKTCAFEKMQRLRL------ 567

Query: 363 KFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
                           L    +QL     YL K+LR++ W  +P + +P NF  +N++ +
Sbjct: 568 ----------------LQLENIQLAGDYGYLSKELRWMCWQGFPSKYIPKNFNMENVIAI 611

Query: 423 NLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
           +L+ S +   W+      P  + + K L                          N S+  
Sbjct: 612 DLKRSNLRLVWKE-----PQDLASLKIL--------------------------NLSHSK 640

Query: 483 NLIEFPQISG--KVTRLYLGQS-AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
            L E P  S    + +L L     + +V  SI  L +L +L+L+ C  L  +  S  KL+
Sbjct: 641 YLTETPDFSKLRNLEKLILKDCPRLCKVHKSIGDLRNLILLNLKDCTSLGNLPRSVYKLK 700

Query: 540 SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
           S+ TLIL GC  ++   E + +ME L  + +    + E+P S   L  +E +
Sbjct: 701 SVKTLILSGCSKIDKLEEDIVQMESLTTLIAKNVVVKEVPFSIVTLKSIEYI 752



 Score = 43.5 bits (101), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 15/147 (10%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSN 633
           +TE P  F  L  LE L ++DC +L  +  +IG L  L  + L   +++  LP SV    
Sbjct: 642 LTETPD-FSKLRNLEKLILKDCPRLCKVHKSIGDLRNLILLNLKDCTSLGNLPRSVYKLK 700

Query: 634 MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF 693
            +++L  S C  ++      ++ + ++  L   +  V+E+P  I  L S+E  Y+S   +
Sbjct: 701 SVKTLILSGCSKIDKLEED-IVQMESLTTLIAKNVVVKEVPFSIVTLKSIE--YISLCEY 757

Query: 694 ESL-----PAII-----KQMSQLRFIH 710
           E L     P+II       ++ L +IH
Sbjct: 758 EGLSHNVFPSIILSWMSPTINPLSYIH 784


>gi|357518005|ref|XP_003629291.1| Resistance protein [Medicago truncatula]
 gi|355523313|gb|AET03767.1| Resistance protein [Medicago truncatula]
          Length = 1039

 Score =  285 bits (730), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 247/750 (32%), Positives = 371/750 (49%), Gaps = 88/750 (11%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V ++GI G GGIGKTTLA A+++  +  FE  CF+ +VR NS    GL+HLQK 
Sbjct: 211 IGSDDEVNMIGIHGSGGIGKTTLALAVYNLIADHFEALCFLENVRENS-NKHGLQHLQKI 269

Query: 61  MLSTTLSEK---LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +LS TL EK   L      I    K R+++ K+L++LDDV+++ QL+ L+G     G GS
Sbjct: 270 LLSETLGEKKIKLTSVKQGIS-IIKHRLQQKKVLLILDDVDKIEQLEALVGGFYWLGSGS 328

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFK-ENHCPEDLNWHSRSVV 176
           R+++TTRDK +L       K+ Y VN L  ++A       AFK E   P   +   R+V 
Sbjct: 329 RVIITTRDKHLLSSHGV--KRTYEVNVLNEKDALRLLTWKAFKTEVFHPSYFDVLKRAV- 385

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            Y  G PL L V+GS+L  K    W   LH    I   EI +I   LK+SF+ L    KS
Sbjct: 386 GYASGLPLALIVIGSNLFGKNIQEWESALHRYEIIPNKEIQNI---LKVSFDALEEDEKS 442

Query: 237 IFLDIACFFEGED------KDFVASILDDSESDVLDILIDKSLVSIS--GNFLNMHDILQ 288
           +FLD+AC + G++      ++ + +  D      + +L++KSL+ IS  G ++ +HD++ 
Sbjct: 443 VFLDMACIYIGKEYQLANMENMLYAHFDACMKYHIGVLVEKSLIKISWTGKYI-VHDLIG 501

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
           +M ++IVR ES  EPGKRSRLW  ++I +VL+ N GT AI+ I+L +     + LD  AF
Sbjct: 502 DMAKEIVRLESPDEPGKRSRLWFHEDIIQVLEDNSGTSAIKSIYL-MECDDEVELDESAF 560

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
            NM NL+                       L         G  +LP  LR + W  YP  
Sbjct: 561 KNMKNLK----------------------TLIIKGGHFSKGPKHLPNSLRVVEWWNYPSE 598

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
             P +F PK L    L  S +          +   ++ F  +  L+F   + L   P   
Sbjct: 599 YFPYDFNPKKLAIFELPKSSLMS------LKLTDLMKKFLNMKILNFDDAEFLTEIPDTS 652

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
             +     +F  C NL                 + I E   S+  L  L+VL  +GC++L
Sbjct: 653 SLLNLELFSFKRCKNL-----------------TTIHE---SVGFLEKLKVLSAQGCRKL 692

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
           ++      KL SL  L +  C NLE FPEIL KME++K +  + T   E+P+SF+NL  L
Sbjct: 693 RKFPP--IKLISLEELNVSFCTNLESFPEILGKMENMKNLVLEETSFKEMPNSFQNLTHL 750

Query: 589 EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
           + L +  C  +  LP  I ++  L  I+   S   Q P S    + + S+  S+   +ES
Sbjct: 751 QTLQLR-CCGVFKLPSCILTMPKLVEIIGWVSEGWQFPKSDEAEDKVSSMVPSN---VES 806

Query: 649 FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
              TF          ++SD  V   P  + +  +++ L+L+ NNF  LP  IK+   LR 
Sbjct: 807 LRLTF---------CNLSDEFV---PIILTWFVNVKELHLAHNNFTILPECIKECHLLRV 854

Query: 709 IHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
           + +++ + LQ +  +   LK L+   CK L
Sbjct: 855 LCVDECHYLQEVRGIAPNLKILYARGCKSL 884



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 45/262 (17%)

Query: 569 YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAA-SAISQLPS 627
           + D   +TE+P +  +L  LE+   + C  L  + +++G LE L  + A     + + P 
Sbjct: 639 FDDAEFLTEIPDT-SSLLNLELFSFKRCKNLTTIHESVGFLEKLKVLSAQGCRKLRKFPP 697

Query: 628 SVALSNMLRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIPQEIAYLSSLEIL 686
              +S  L  L+ S C  LESFP   +LG +  M  L + + + +E+P     L+ L+ L
Sbjct: 698 IKLIS--LEELNVSFCTNLESFPE--ILGKMENMKNLVLEETSFKEMPNSFQNLTHLQTL 753

Query: 687 YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF 746
            L       LP+ I  M +L    +E    +    + P         D    +   ++P 
Sbjct: 754 QLRCCGVFKLPSCILTMPKL----VEIIGWVSEGWQFPKS-------DEAEDKVSSMVPS 802

Query: 747 CLESLDLTGCNM---------------------LRSLPELPLC------LQYLNLEDCNM 779
            +ESL LT CN+                       +   LP C      L+ L +++C+ 
Sbjct: 803 NVESLRLTFCNLSDEFVPIILTWFVNVKELHLAHNNFTILPECIKECHLLRVLCVDECHY 862

Query: 780 LRSLPELPLCLQLLTVRNCNRL 801
           L+ +  +   L++L  R C  L
Sbjct: 863 LQEVRGIAPNLKILYARGCKSL 884


>gi|15227315|ref|NP_179279.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|3757516|gb|AAC64218.1| disease resistance protein (TIR-NBS-LRR class), putative
           [Arabidopsis thaliana]
 gi|330251451|gb|AEC06545.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1109

 Score =  285 bits (729), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 220/696 (31%), Positives = 332/696 (47%), Gaps = 107/696 (15%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQF-SHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           D V+IVGI+G  GIGKTT+A+A+       +F+ +CFV ++RG+         L+ ++  
Sbjct: 204 DGVKIVGIFGPAGIGKTTIARALHSLLLFKKFQLTCFVDNLRGSYPIGIDEYGLKLRLQE 263

Query: 64  TTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             LS+ L   G  I H    KER+  MK+LI+LDDVN+V QL+ L  +   FG GSR++V
Sbjct: 264 HLLSKILNQDGMRISHLGAVKERLCDMKVLIILDDVNDVKQLEALANDTTWFGPGSRVIV 323

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TT +K +L+  R     +Y V     E+A E  C +AFK++      N+ ++ V      
Sbjct: 324 TTENKEILQ--RHGIDNMYHVGFPSDEKAMEILCGYAFKQSSPRPGFNYLAQKVTWLCGN 381

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L V+GSSL  K++  W  V+  L+ I +    DI D+L++ +  L    +S+FL I
Sbjct: 382 LPLGLRVVGSSLRGKKEDEWKSVIRRLDTIID---RDIEDVLRVGYESLHENEQSLFLHI 438

Query: 242 ACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQ 297
           A FF  +D D V ++L D   D+   L IL++KSL+ IS    + MH +LQ++GRQ + +
Sbjct: 439 AVFFNCKDVDLVKAMLADDNLDIAHGLKILVNKSLIYISTTGEIRMHKLLQQVGRQAINR 498

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
           +   EP KR  L + +EI  VL+++KGT  + GI  D S I  + L  RA   MSNLR  
Sbjct: 499 Q---EPWKRLILTNAQEICYVLENDKGTGVVSGISFDTSGISEVILSNRALRRMSNLRFL 555

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
             Y  +                  + + +P  + + P +LR LHW+ YP ++LP  F  +
Sbjct: 556 SVYKTR--------------HDGNNIMHIPEDMKF-PPRLRLLHWEAYPSKSLPLGFCLE 600

Query: 418 NLVELNLRCSKVEQPWEGEKAC-------------------------------------- 439
           NLVELN++ S++E+ WEG +                                        
Sbjct: 601 NLVELNMKDSQLEKLWEGTQLLTNLKKMDLSRSVHLKELPDLSNATNLERLELCDCRALV 660

Query: 440 -VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLY 498
            +P SI N   L  L    C SL   P++++      I  + C  L  FP  S  + RL 
Sbjct: 661 ELPKSIGNLHKLENLVMANCISLEVIPTHINLASLEHITMTGCSRLKTFPDFSTNIERLL 720

Query: 499 LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
           L  +++EEVP+SI   + L    ++  + LK                     +L +FP  
Sbjct: 721 LIGTSVEEVPASIRHWSSLSDFCIKNNEDLK---------------------SLTYFP-- 757

Query: 559 LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD-----------NIG 607
            EK+E L   Y+D   I ++P   +   GL+ L V  C KL +LP+           +  
Sbjct: 758 -EKVELLDLSYTD---IEKIPDCIKGFHGLKSLDVAGCRKLTSLPELPMSLGLLVALDCE 813

Query: 608 SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
           SLE + Y L   SA     +   L    R L    C
Sbjct: 814 SLEIITYPLNTPSARLNFTNCFKLGEESRRLIIQRC 849



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 31/254 (12%)

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT-PITELPSSFENLPG 587
           K +   FC L +LV L +     LE   E  + + +LK++   R+  + ELP    N   
Sbjct: 591 KSLPLGFC-LENLVELNMKDS-QLEKLWEGTQLLTNLKKMDLSRSVHLKELPD-LSNATN 647

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYL-YYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
           LE L + DC  L  LP +IG+L  L   ++A   ++  +P+ + L++ L  +  + C  L
Sbjct: 648 LERLELCDCRALVELPKSIGNLHKLENLVMANCISLEVIPTHINLAS-LEHITMTGCSRL 706

Query: 647 ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
           ++FP  F   +  + L+  S   V E+P  I + SSL    +  N  E L ++     ++
Sbjct: 707 KTFP-DFSTNIERLLLIGTS---VEEVPASIRHWSSLSDFCIKNN--EDLKSLTYFPEKV 760

Query: 707 RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP 766
             + L        + ++P C+K  H                L+SLD+ GC  L SLPELP
Sbjct: 761 ELLDLS----YTDIEKIPDCIKGFH---------------GLKSLDVAGCRKLTSLPELP 801

Query: 767 LCLQYLNLEDCNML 780
           + L  L   DC  L
Sbjct: 802 MSLGLLVALDCESL 815


>gi|357513721|ref|XP_003627149.1| Disease resistance protein [Medicago truncatula]
 gi|355521171|gb|AET01625.1| Disease resistance protein [Medicago truncatula]
          Length = 1630

 Score =  285 bits (729), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 244/749 (32%), Positives = 367/749 (48%), Gaps = 88/749 (11%)

Query: 6   TVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTT 65
           T+  VGIWGM GIGKTT+AK +F +    ++  CF+  +   SE  G + +++ ++LS  
Sbjct: 285 TIPRVGIWGMSGIGKTTIAKQMFAKNFPYYDNVCFLEKINEESEKFGQI-YVRNKLLSEL 343

Query: 66  LSEKLEVAGPNIPH-FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
           L +K+  +  +  H F K R+ R K+ IVLDDV+   QL  L   L   G  SRI++TTR
Sbjct: 344 LKQKITASDVHGLHTFIKTRLFRKKVFIVLDDVDNATQLDDLCRVLGDLGPDSRIIITTR 403

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           D+  L    G+  +IY V   + +++   F   AFK+ H  +     S   V    G PL
Sbjct: 404 DRHTLS---GKVDEIYEVKTWKLKDSLNLFSLRAFKKAHPLKGYERLSERAVKCAGGVPL 460

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L+VLGS    +    W   L+D  +   +  H+I  +L+ S+N L+ R K +FLDIA F
Sbjct: 461 ALQVLGSHFHSREPEFWESELNDYVKKGGA-FHEIQKVLRASYNGLSWREKEMFLDIAFF 519

Query: 245 FEGEDKDFVASILDD---SESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIVRQESE 300
           F+GE+KD V  ILD    + +  + IL DK+L++IS N  + MHD+LQ+M   IVR+E  
Sbjct: 520 FKGENKDIVTRILDAYGYNATSGIKILEDKALITISNNDRIQMHDLLQKMALDIVREEY- 578

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
            + GK SRL D  +I  VL +NKG+DAIEGI  DLS+   I++    F  M+ LR  KF+
Sbjct: 579 NDRGKCSRLRDATDICDVLGNNKGSDAIEGIIFDLSQKVDIHVQADTFKLMTKLRFLKFH 638

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
           +P   +  KL +           V LP  +     KL+YL W+ YPL++LP  F  + L+
Sbjct: 639 IPNGKK--KLGT-----------VHLPENIMPFFDKLKYLEWNGYPLKSLPEPFHAEQLI 685

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
           ++ L  S +E  W G        +Q    L  +    C+  RS                 
Sbjct: 686 QICLPHSNIEHLWHG--------MQEVVNLEVIDLSECKKFRSL---------------- 721

Query: 481 CVNLIEFPQISGKVTRLYLGQSAIEEV----PSSIECLTDLEVLDLRGCKRLKRISTSFC 536
                  P +SG +    L  S  EE+    PS+    T L+ L L  C +L+ +     
Sbjct: 722 -------PDLSGALKLKQLRLSGCEELCELQPSAFSKDT-LDTLLLDRCIKLESLMGE-K 772

Query: 537 KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
            L SL    + GC +L+ F       + + R+   +T I  L  S  ++  L  L +ED 
Sbjct: 773 HLTSLKYFSVKGCKSLKEFSL---SSDSINRLDLSKTGIKILHPSLGDMNNLIWLNLEDL 829

Query: 597 SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
           + L NLP  +  L  L  +  +         +V   + L +L                 G
Sbjct: 830 N-LTNLPIELSHLRSLTELRVSKC-------NVVTKSKLEAL---------------FDG 866

Query: 657 LSAMGLLHISDYA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN 715
           L+ + LLH+ D   + E+P  I+ L SL  L L G++ E LPA IK +S+L    L++ +
Sbjct: 867 LTLLRLLHLKDCCNLIELPANISSLESLHELRLDGSSVEELPASIKYLSELEIQSLDNCS 926

Query: 716 MLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
            L+ LPELPL +K     +C  L ++  L
Sbjct: 927 KLRCLPELPLSIKEFQADNCTSLITVSTL 955



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 121/528 (22%), Positives = 212/528 (40%), Gaps = 83/528 (15%)

Query: 552  LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
            L+  PE     E L +I    + I  L    + +  LEV+ + +C K  +LPD  G+L+ 
Sbjct: 672  LKSLPEPFH-AEQLIQICLPHSNIEHLWHGMQEVVNLEVIDLSECKKFRSLPDLSGALKL 730

Query: 612  LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP-------------------RT 652
                L+    + +L  S    + L +L    C  LES                     + 
Sbjct: 731  KQLRLSGCEELCELQPSAFSKDTLDTLLLDRCIKLESLMGEKHLTSLKYFSVKGCKSLKE 790

Query: 653  FLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE 712
            F L   ++  L +S   ++ +   +  +++L  L L   N  +LP  +  +  L  + + 
Sbjct: 791  FSLSSDSINRLDLSKTGIKILHPSLGDMNNLIWLNLEDLNLTNLPIELSHLRSLTELRVS 850

Query: 713  DFNM-----LQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLD---LTGCNMLRSLPE 764
              N+     L++L +    L+ LHL DC  L  LP     LESL    L G     S+ E
Sbjct: 851  KCNVVTKSKLEALFDGLTLLRLLHLKDCCNLIELPANISSLESLHELRLDGS----SVEE 906

Query: 765  LPLCLQYLN------LEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASV 818
            LP  ++YL+      L++C+ LR LPELPL ++     NC  L            +  S 
Sbjct: 907  LPASIKYLSELEIQSLDNCSKLRCLPELPLSIKEFQADNCTSL------------ITVST 954

Query: 819  LEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLG 878
            L+  S +           +   I F+ +  L+L+G + + I  D++L ++  A  ++ + 
Sbjct: 955  LKTFSINMIG--------QKKYISFKNSIMLELDGPSLDCITEDAVLTMKSAAFHNVLVR 1006

Query: 879  YEMAINEKLSELRGSLIVLPGSEIPDWFSNQS-SGSSICIQLPPHSSCRNLIGFAFCAVL 937
                     +  R   + LPG  +P  F ++S + SSI + +     C         AV+
Sbjct: 1007 KYRFQTHSFNYNRAE-VCLPGRRVPREFKHRSTTSSSITVNISKSLGC-------IFAVV 1058

Query: 938  DSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLI---DSDRVILGFKP- 993
             S    +    YF       +  +  +E    ++GY S++    I   + D + + + P 
Sbjct: 1059 VSPSKRTQQHGYF-----VGMRCQCYTEDGSREVGYKSKWDHKPITNLNMDHIFVWYDPY 1113

Query: 994  -----CLNVGFPDGYHHTIATFKFFAER--KFYKIKRCGLCPVYANPS 1034
                   ++G    +   I T+            IK CG+CP+Y + S
Sbjct: 1114 HYDSILSSIGRKISFKFCIKTYTSSGRELDGLLSIKECGVCPIYYSES 1161


>gi|356542401|ref|XP_003539655.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1014

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 218/601 (36%), Positives = 316/601 (52%), Gaps = 78/601 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGP---N 76
           KTT+A+A ++  + +FEG CF++D+R  + +   L  LQ+ +LS  L EK    G     
Sbjct: 228 KTTVARAAYNMIADQFEGLCFLADIREKAISKHRLVQLQETLLSDILGEKDIKVGDVSRG 287

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           IP   + R+R+ K+L++LDDV+++ QL+ L G    FG GS+I++TTRDK++L       
Sbjct: 288 IP-IIERRLRKKKVLLILDDVDKLVQLQVLAGGYCWFGSGSKIIITTRDKKLLATHG--V 344

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHC-PEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
            K++ V  L  E+AFE F   AFK N   P  ++  +R+V  Y  G PL LEV+GS L  
Sbjct: 345 VKLHEVKQLNDEKAFELFSWHAFKRNKFDPSYVDILNRAVF-YACGLPLALEVIGSHLFG 403

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           K        L    RI    IHDI   LK+S++ L    K IFLDIACFF   +  FV  
Sbjct: 404 KSLDECNSALDKYERIPHRGIHDI---LKVSYDGLEEDEKGIFLDIACFFNTCNMRFVKQ 460

Query: 256 ILDD---SESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
           +L        D + +L DKSL+ I     + MHD++Q MGR+IVRQES+ +P KRSRLW 
Sbjct: 461 MLHARGFHAEDGIRVLSDKSLIKIDESGCVKMHDLIQHMGREIVRQESKLKPRKRSRLWL 520

Query: 312 PKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
            ++I RVL+ NKGTD IE I L++   K +    +AF  M NL++               
Sbjct: 521 DEDIVRVLEENKGTDKIEAIMLNVRDKKEVQWSGKAFKKMKNLKI--------------- 565

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNL--RCSKV 429
            +    Q  +S +       +LP  LR L W +YP  +LP +F PK L  LN+   C + 
Sbjct: 566 -LVIIGQAIFSSIP-----QHLPNSLRVLEWSSYPSPSLPPDFNPKELEILNMPQSCLEF 619

Query: 430 EQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV----TINFSYCVNLI 485
            QP           ++ F+ L +++F+ C+    F + LH +C V     ++   C NLI
Sbjct: 620 FQP-----------LKRFESLISVNFEDCK----FLTELHSLCEVPFLRHLSLDNCTNLI 664

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
                               +V  S+  L +L  L   GC +L+ I     KL SL  L 
Sbjct: 665 --------------------KVHDSVGFLDNLLFLSAIGCTQLE-ILVPCIKLESLEFLD 703

Query: 546 LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
           L  C  L+ FPE++ KM+ +K +Y D+T IT+LP S  NL GLE L++  C++L  LP +
Sbjct: 704 LTECFRLKSFPEVVGKMDKIKDVYLDKTGITKLPHSIGNLVGLERLYLRQCTQLYQLPIS 763

Query: 606 I 606
           I
Sbjct: 764 I 764


>gi|13517466|gb|AAK28804.1|AF310959_1 resistance-like protein P1-B [Linum usitatissimum]
          Length = 1196

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 273/868 (31%), Positives = 415/868 (47%), Gaps = 147/868 (16%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEG--SCFVSDVRGNSETAGGLEHLQ 58
            MD  D   I+G+WGMGG+GKTTLA+A +D+ +   +G    F+ +V    E   G++ + 
Sbjct: 196  MDKLDDTCIIGLWGMGGVGKTTLAEACYDRVTSSNKGIKHLFIRNVNEMCEKHHGVDKIV 255

Query: 59   KQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRL-IGEL----DQ 112
             ++ S  L E  ++    NI  + +ER+ R+++ +VLD+V  + QL++L +G +      
Sbjct: 256  HKLYSKLLDENNIDREDLNIA-YRRERLSRLRVFVVLDNVETLEQLEKLALGYVFNLSKV 314

Query: 113  FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNW-- 170
            F  GSRI++TTR+K+VL+       KIY V  L  +E+   F   AFK++  P+D NW  
Sbjct: 315  FAAGSRIIITTRNKKVLQNAMA---KIYNVECLNDKESIRLFSLHAFKQDR-PQD-NWMG 369

Query: 171  HSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
             SR   SY KGNPL L++LG +L  +   +W  +L  L    +S    +  IL+ S++KL
Sbjct: 370  KSRLATSYCKGNPLALKILGGALFDEDVHYWKSLLTGLR---QSGNLGMETILRRSYDKL 426

Query: 231  TPRVKSIFLDIACFFEGEDK----DFVASILDDSESDVLDILIDKSLV----SISGNFLN 282
                K IF+D+AC   G  +    D++A++   S   V D LIDKSL+    S +G  + 
Sbjct: 427  GKEEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVKVKD-LIDKSLLTCVPSENGEMIE 485

Query: 283  MHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLK---------------------- 320
            +HD+L+EM   IV++E +   GKRSRL DP ++ ++L                       
Sbjct: 486  VHDLLKEMAWNIVKEEPKL--GKRSRLVDPDDVHKLLSTSEVKSWSTSIVNLFKGIVMVI 543

Query: 321  -----------HNKGTDAIE------GIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPK 363
                       H KG D +E      GI LDLS  K + L   AF  M++L   KF +P 
Sbjct: 544  PRRKRRKVTDMHEKGYDPLEEHRTTEGICLDLSGTKEMYLKANAFEGMNSLTFLKFELP- 602

Query: 364  FYEIEKLPSMSTEEQLSYSKVQLP-NGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
              EIE LP    +     +K+ LP +GL+ LP+ LR+L WD YP ++LP+ F P++LV L
Sbjct: 603  --EIE-LPRYRLKN--VKTKIHLPYDGLNSLPEGLRWLQWDGYPSKSLPAKFYPQHLVHL 657

Query: 423  NLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
             +R S + + WEG                                   V  + ++  YC 
Sbjct: 658  IIRGSPIRRCWEGY-----------------------------DQPQLVNLIVLDLRYCA 688

Query: 483  NLIEFPQISGKVTRLYLGQSAIE---EVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
            NLI  P IS  +    L         EVP  ++ LT L  LD+  CK LKR+     KL 
Sbjct: 689  NLIAIPDISSSLNLEELLLCLCVSLVEVPFHVQYLTKLVTLDISHCKNLKRLPP---KLD 745

Query: 540  S-LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
            S L+  + +  L +   PEI  +   L+      T + ELPS+  N+    VL +     
Sbjct: 746  SKLLKHVRMKGLGITRCPEIDSR--ELEEFDLRGTSLGELPSAIYNIKQNGVLRLHG--- 800

Query: 599  LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
                  NI     +   L   S IS     + L++  +   +S    L  F   FL G  
Sbjct: 801  -----KNITKFPPITTTLKHFSLISTSIREIDLADYHQQHQTSDGLLLPRFQNLFLAGNR 855

Query: 659  AMGLL------HISD----------YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
             + +L       IS+           ++ EI + +  L+SLE+ Y    +  S+P  I  
Sbjct: 856  QLEVLPNGIWNMISEDLLIGRSPLIESLPEISEPMNTLTSLEVFYC--RSLTSIPTSISN 913

Query: 703  MSQLRFIHLEDFNMLQSLPELPLCLKYLHLID---CKMLQSLPVLPFCLESL---DLTGC 756
            +  LR + L     ++SLP     L+ L+ ID   CK L+S+P     L SL    ++GC
Sbjct: 914  LRSLRSLRLSKTG-IKSLPSSIHELRQLYSIDLRNCKSLESIPNSIHNLSSLVTFSMSGC 972

Query: 757  NMLRSLPELPLCLQYLNLEDCNMLRSLP 784
             ++ SLPELP  L+ LN+  C  L++LP
Sbjct: 973  KIIISLPELPPNLKTLNVSGCKSLQALP 1000



 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 23/105 (21%)

Query: 501  QSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVT----------------- 543
            ++ I+ +PSSI  L  L  +DLR CK L+ I  S   L SLVT                 
Sbjct: 924  KTGIKSLPSSIHELRQLYSIDLRNCKSLESIPNSIHNLSSLVTFSMSGCKIIISLPELPP 983

Query: 544  ----LILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE--LPSSF 582
                L + GC +L+  P    K+ +L RIY +  P  +  +P+ F
Sbjct: 984  NLKTLNVSGCKSLQALPSNTCKLLYLNRIYFEECPQVDQTIPAEF 1028


>gi|356559367|ref|XP_003547971.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1047

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 241/758 (31%), Positives = 351/758 (46%), Gaps = 91/758 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V +VGI G+GG+GKTTLA A+++  +  FE SCF+ +VR  S   G L+HLQ  
Sbjct: 204 VGSDDVVHMVGIHGLGGVGKTTLAVAVYNSIAGHFEASCFLENVRETSNKKG-LQHLQSI 262

Query: 61  MLSTTLSEK---LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +LS T+ EK   L      IP   K ++++ K+L++LDDV+E   L+ +IG  D FG GS
Sbjct: 263 LLSKTVGEKKIKLTNWREGIP-IIKHKLKQKKVLLILDDVDEHKHLQAIIGSPDWFGCGS 321

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFK-ENHCPEDLNWHSRSVV 176
           R+++TTR++ +L       K  Y+V  L  + A +     AF+ E       N      +
Sbjct: 322 RVIITTRNEHLLALHN--VKITYKVRELNEKHALQLLTQKAFELEKEVDSSYNDILNRAL 379

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            Y  G PL LEV+GS+L  K    W   L+   RI +  I   Y ILK+S++ L    KS
Sbjct: 380 IYASGLPLALEVIGSNLFGKSIKEWESALNGYERIPDKSI---YMILKVSYDALNEDEKS 436

Query: 237 IFLDIACFFE----GEDKDFVASILDDSESDVLDILIDKSLVSISGNF----LNMHDILQ 288
           IFLDIAC F+    GE +D + +         + +L+ KSL++I G++    + +HD+++
Sbjct: 437 IFLDIACCFKDYELGELQDILYAHYGRCMKYHIGVLVKKSLINIHGSWDYKVMRLHDLIE 496

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRA 347
           +MG++IVR+ES  EPGKRSRLW  ++I++VL+ NKGT  IE I ++ S   + +  D  A
Sbjct: 497 DMGKEIVRRESPTEPGKRSRLWSHEDINQVLQENKGTSKIEIICMNFSSFGEEVEWDGDA 556

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F  M NL+        F                        G  YLP  LR L W   P 
Sbjct: 557 FKKMKNLKTLIIKSDCF----------------------TKGPKYLPNTLRVLEWKRCPS 594

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSN 467
           R  P NF PK L    LR S             P   + F  L+ L+   C SL   P  
Sbjct: 595 RDWPHNFNPKQLAICKLRHSSFTSL-----ELAPLFEKRFVNLTILNLDKCDSLTEIPDV 649

Query: 468 LHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKR 527
                   ++F+ C NL                      +  S+  L  L++L   GC  
Sbjct: 650 SCLSKLEKLSFARCRNLF--------------------TIHYSVGLLEKLKILYAGGCPE 689

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
           LK       KL SL    L GC NLE FPEIL KME++  +  D   I E   SF NL  
Sbjct: 690 LKSFPP--LKLTSLEQFELSGCHNLESFPEILGKMENITVLDLDECRIKEFRPSFRNLTR 747

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQL-----PSSVALSNMLRSLDSSH 642
           L+ L+             +G   Y      AA+ IS +      + V  + +   L    
Sbjct: 748 LQELY-------------LGQETYRLRGFDAATFISNICMMPELARVEATQLQWRLLPDD 794

Query: 643 CKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
              L S   + +  L  +G     D +   +   ++   +++ L LS + F  +P  IK 
Sbjct: 795 VLKLSSVVCSSMQHLEFIG----CDLSDELLWLFLSCFVNVKNLNLSASKFTVIPECIKD 850

Query: 703 MSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
              L  + L+  + LQ +  +P  LKY   + C  L S
Sbjct: 851 CRFLTTLTLDYCDRLQEIRGIPPNLKYFSALGCLALTS 888



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 78/349 (22%), Positives = 134/349 (38%), Gaps = 72/349 (20%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +TE+P     L  LE L    C  L  +  ++G LE L  + A      +    + L++ 
Sbjct: 643 LTEIPD-VSCLSKLEKLSFARCRNLFTIHYSVGLLEKLKILYAGGCPELKSFPPLKLTS- 700

Query: 635 LRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF 693
           L   + S C  LESFP   +LG +  + +L + +  ++E       L+ L+ LYL    +
Sbjct: 701 LEQFELSGCHNLESFPE--ILGKMENITVLDLDECRIKEFRPSFRNLTRLQELYLGQETY 758

Query: 694 ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDL 753
                 ++      FI   +  M+  L  +        L+   +L+   V+   ++ L+ 
Sbjct: 759 R-----LRGFDAATFI--SNICMMPELARVEATQLQWRLLPDDVLKLSSVVCSSMQHLEF 811

Query: 754 TGCNMLRSLPELPLCLQYLNLEDCNMLRS-LPELPLC------LQLLTVRNCNRLQSLPE 806
            GC++   L  L L   ++N+++ N+  S    +P C      L  LT+  C+RLQ +  
Sbjct: 812 IGCDLSDELLWLFLSC-FVNVKNLNLSASKFTVIPECIKDCRFLTTLTLDYCDRLQEIRG 870

Query: 807 ILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLR 866
           I                   P+L++           F    CL L   +           
Sbjct: 871 I------------------PPNLKY-----------FSALGCLALTSSS----------- 890

Query: 867 IRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSI 915
                         M  N++L E+  +  +LP  +IP WF   S G SI
Sbjct: 891 ------------ISMLQNQELHEVGDTFFILPSGKIPGWFECHSRGPSI 927


>gi|227438251|gb|ACP30615.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1147

 Score =  284 bits (727), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 264/825 (32%), Positives = 397/825 (48%), Gaps = 83/825 (10%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEF-EGSCFVSDVRGNSETAGGLEHLQK 59
           + SS  VQI+G++GMGGIGKTTLAKA++ +    F E   F+S+VR  S    GL +L+K
Sbjct: 203 VKSSCDVQILGLYGMGGIGKTTLAKALYKKMVEYFKEQRVFISNVRERSSGKDGLLNLEK 262

Query: 60  QMLSTTLSEKLEVAGPNIPH-FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            +++       E+   +      +E V   K+L+VLDDV+ V Q+  L+GE   +G+GS 
Sbjct: 263 TLITELFDSPPEIEDVDQGRDKIRESVHEKKILVVLDDVDNVDQVNALVGERSWYGEGSL 322

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           IV+TTRD+ +L       K  Y VN L  E+A + F   + ++      L   S ++V  
Sbjct: 323 IVITTRDEDILNSLSVSLK--YEVNCLSEEQAVKLFSYHSLRKEKPTGSLLKLSENIVKI 380

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
           T   PL +EV GS    K++  W   +  L     ++ + + D+LK+SF+ L    K +F
Sbjct: 381 TGLLPLAVEVFGSLFYDKKEKEWQVQVKKLEN---TKPNGLRDVLKVSFDSLDDEEKKVF 437

Query: 239 LDIACFFEGED--KDFVASILDD---SESDVLDILIDKSLVS-ISGNFLNMHDILQEMGR 292
           LDIAC F   D  K+ +  +L     +   VL  L  KSLV  ++ N L MHD +++MG 
Sbjct: 438 LDIACLFLKMDMTKEEIVDVLKGCGFNAEAVLKALRQKSLVKFLADNTLWMHDQIKDMGM 497

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           Q+V +ES ++PGKRSRLWD  EI   + + KGT +I GI LD  K K + LD    T+  
Sbjct: 498 QMVVKESPEDPGKRSRLWDRGEI---MNNMKGTTSIRGIVLDFKK-KSMRLDDNPGTSSV 553

Query: 353 NLRLFKFYVPKFYE----IEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
              L     P   E    +E    M     L  + V+L   L+ LP  L+++ W   PL+
Sbjct: 554 CSYLKNILKPTRTENTIPVEHFVPMKKLRLLQINHVELQGNLELLPSDLKWIQWRGCPLK 613

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            +P++F  + L  L+L  S +      +   V   +Q    L  ++ +GC SL + P   
Sbjct: 614 DVPASFLSRQLAVLDLSESGIRGFQSSQLKIV--GLQVEGNLRVVNLRGCDSLEAIPDLS 671

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
           +      + F  C  L+E                    VPSS+  L  L  LDLR C  L
Sbjct: 672 NHKSLEKLVFEGCKLLVE--------------------VPSSVGNLRSLLHLDLRNCPNL 711

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
                    L+SL  L L GC +L   PE +  M  LK +  D T I  LP S   L  L
Sbjct: 712 TEFLVDVSGLKSLEKLYLSGCSSLSVLPENIGYMLCLKELLLDETAIKNLPGSIFRLEKL 771

Query: 589 EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
           + L ++ C  +  LP+ IG+L  L  +  +++++  LPSS+     L+ L   HC  L  
Sbjct: 772 QKLSLKSCRSIHELPECIGTLTSLEELDLSSTSLQSLPSSIGNLKNLQKLHVMHCASLSK 831

Query: 649 FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
            P T +  L+++  L I   AV E+P           L L   +   +P  I +++ L+ 
Sbjct: 832 IPDT-INKLASLQELIIDGSAVEELP-----------LSLKPGSLSKIPDTINKLASLQE 879

Query: 709 IHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC 768
           + ++      ++ ELPL LK           SLP    CL      GC   +SL ++P  
Sbjct: 880 LIIDG----SAVEELPLSLKP---------GSLP----CLAKFSAGGC---KSLKQVPSS 919

Query: 769 LQYLN--LE---DCNMLRSLPELPLCL---QLLTVRNCNRLQSLP 805
           + +LN  L+   D   + +LPE    L   Q + +RNC  L+SLP
Sbjct: 920 VGWLNSLLQLKLDSTPITTLPEEISQLRFIQKVELRNCLSLKSLP 964



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 163/345 (47%), Gaps = 16/345 (4%)

Query: 440  VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
            +PSSI N K L  L    C SL   P  ++ +  +         + E P        L L
Sbjct: 808  LPSSIGNLKNLQKLHVMHCASLSKIPDTINKLASLQELIIDGSAVEELP--------LSL 859

Query: 500  GQSAIEEVPSSIECLTDLE--VLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPE 557
               ++ ++P +I  L  L+  ++D    + L  +S     L  L      GC +L+  P 
Sbjct: 860  KPGSLSKIPDTINKLASLQELIIDGSAVEELP-LSLKPGSLPCLAKFSAGGCKSLKQVPS 918

Query: 558  ILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILA 617
             +  +  L ++  D TPIT LP     L  ++ + + +C  L +LP+ IG ++ L+ +  
Sbjct: 919  SVGWLNSLLQLKLDSTPITTLPEEISQLRFIQKVELRNCLSLKSLPNKIGDMDTLHSLYL 978

Query: 618  AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI 677
              S I +LP +      L  L  + CK L+  P +F  GL ++  L++ +  V E+P   
Sbjct: 979  EGSNIEELPENFGNLENLVLLQMNKCKNLKKLPNSF-GGLKSLCHLYMEETLVMELPGSF 1037

Query: 678  AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM 737
              LS+L +L L  N F SLP+ +K +S L+ + L D   L  LP LP  L+ L+L +C  
Sbjct: 1038 GNLSNLRVLNLGNNKFHSLPSSLKGLSSLKELSLCDCQELTCLPSLPCNLEKLNLANCCS 1097

Query: 738  LQSLPVLP--FCLESLDLTGCNMLRSLPELP--LCLQYLNLEDCN 778
            L+S+  L     L  L+LT C ++  +P L     L+ L++  CN
Sbjct: 1098 LESISDLSELTMLHELNLTNCGIVDDIPGLEHLTALKRLDMSGCN 1142


>gi|13517469|gb|AAK28806.1|AF310960_2 P2 rust resistance protein [Linum usitatissimum]
          Length = 1211

 Score =  284 bits (727), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 261/837 (31%), Positives = 408/837 (48%), Gaps = 127/837 (15%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEG--SCFVSDVRGNSETAGGLEHLQ 58
            MD  D   I+G+WGMGG+GKTTLA+A +++ +   +G    FV +V    E   G+E + 
Sbjct: 211  MDKLDDTCIIGLWGMGGVGKTTLAEACYERVTSSNKGIKHLFVRNVNEICEKHHGVEKIV 270

Query: 59   KQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRL----IGELDQ- 112
             ++ S  L E  ++    NI  + +ER+ R ++ +VLD+V  + QL++L    +  L + 
Sbjct: 271  HKLYSKLLDENNIDREDLNI-GYRRERLSRSRVFVVLDNVETLEQLEQLALGYVFNLSKV 329

Query: 113  FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
            F  GSRI++TTR+K+VL+       KIY V  L  +E+   F   AFK++  P+D NW  
Sbjct: 330  FAAGSRIIITTRNKKVLQNAMA---KIYNVECLNNKESIRLFSLHAFKQDR-PQD-NWTD 384

Query: 173  RS--VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
            +S   +SY KGNPL L++LG +L  +   +W  +L  L    +S    I  IL+ S++KL
Sbjct: 385  KSHLAISYCKGNPLALKILGGALFGEDVHYWRSLLTGLR---QSGNLGIESILRRSYDKL 441

Query: 231  TPRVKSIFLDIACFFEGEDK----DFVASILDDSESDVLDILIDKSLV----SISGNFLN 282
                K IF+D+AC   G  +    D++A++   S   V D LIDKSL+    S +G  + 
Sbjct: 442  GKEEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVRVKD-LIDKSLLTCVPSENGEMIE 500

Query: 283  MHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLK---------------------- 320
            +HD+L+EM   IV++E +   GKRSRL DP ++ ++L                       
Sbjct: 501  VHDLLKEMAWNIVKEEPKL--GKRSRLVDPDDVHKLLSTSEVKNWSTSIVNLFKGIVMVI 558

Query: 321  -----------HNKGTDAI------EGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPK 363
                       H +G D +      EGI LDLS  K + L   AF  M++L   KF  P+
Sbjct: 559  PRRKRRKVTDMHERGYDPLEEHRTTEGICLDLSGTKEMYLKANAFEGMNSLTFLKFKSPE 618

Query: 364  F-YEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
              Y    L ++ T+  L Y      +GL+ LP+ LR+L WD YP ++LP+ F P++LV L
Sbjct: 619  LDYPQYPLKNVKTKIHLPY------DGLNSLPEGLRWLQWDGYPSKSLPAKFYPQHLVHL 672

Query: 423  NLRCSKVEQPWEG--EKACVPSSIQNFKYLSAL---------------SFKGCQSLRSFP 465
             +R S + + WEG  +   V   + + +Y + L                  GC+SL   P
Sbjct: 673  IIRGSPIRRCWEGYDQPQLVNLIVLDLRYCTNLIAIPDISSSLNLEELLLFGCRSLVEVP 732

Query: 466  SNLHFVCP-VTINFSYCVNLIEFP-----QISGKVTRLYLGQSAIEEVPSSIECLTDLEV 519
             ++ ++   VT++ S+C NL   P     ++   V    LG +   E+ S      +LE 
Sbjct: 733  FHVQYLTKLVTLDISFCKNLKRLPPKLDSKLLKHVRMQGLGITRCPEIDSR-----ELEK 787

Query: 520  LDLRGC-KRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITEL 578
             DL  C   L  + ++   ++    L L G  N+  FP I      LK     RT I E+
Sbjct: 788  FDL--CFTSLGELPSAIYNVKQNGVLRLHG-KNITKFPGI---TTILKYFTLSRTSIREI 841

Query: 579  ----------PSSFENLPGLEVLFVEDCSKLDNLPDNIGSL--EYLYYILAAASAISQLP 626
                       S    LP  + L++    +L+ LP++I ++  E LY  +  +  I  LP
Sbjct: 842  DLADYHQQHQTSDGLLLPRFQNLWLTGNRQLEVLPNSIWNMISEELY--IGRSPLIESLP 899

Query: 627  SSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL 686
                  + L SL    C+ L S P T +  L ++  L + +  ++ +P  I  L  L  +
Sbjct: 900  EISEPMSTLTSLHVFCCRSLTSIP-TSISNLRSLRSLRLVETGIKSLPSSIHELRQLHSI 958

Query: 687  YLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
             L    + ES+P  I ++S+L    +     + SLPELP  LK L + DCK LQ+LP
Sbjct: 959  CLRDCKSLESIPNSIHKLSKLGTFSMYGCESIPSLPELPPNLKELEVRDCKSLQALP 1015


>gi|295083307|gb|ADF78107.1| Rj2 protein [Glycine max]
 gi|295083315|gb|ADF78111.1| Rj2 protein [Glycine max]
 gi|295083317|gb|ADF78112.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  284 bits (727), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 259/799 (32%), Positives = 371/799 (46%), Gaps = 126/799 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V ++GI G+GGIGK+TLA A+++  +  F+GSCF+ D+R  S    GL+HLQ  
Sbjct: 205 VESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREKS-NKKGLQHLQSI 263

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +L   L EK      +E     I H    R++R K+L++LDDV++  QL+ ++G    FG
Sbjct: 264 LLREILGEKEINLASVEQGASIIQH----RLQRKKVLLILDDVDKHEQLQAIVGRPCWFG 319

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK++L       K+ Y V  L    A +     +FK              
Sbjct: 320 PGSRVIITTRDKQLLASHGV--KRTYEVELLNENNALQLLTWKSFKTEKVDPSYKEVLND 377

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV Y  G PL LEV+GS+L  K    W   +    RI   +I    +ILK+SF+ L    
Sbjct: 378 VVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQI---LEILKVSFDALEEEQ 434

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNF------LNMH 284
           K++FLDIAC F   D   V  IL     D +     +L++KSL+    ++      + MH
Sbjct: 435 KNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIVTMH 494

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG---- 340
           D++++MG++IVRQES KEP KRSRLW P++I  VL+ N+GT  IE I LD          
Sbjct: 495 DLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKEEIV 554

Query: 341 INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYL 400
           + L+ +AF  M NL+       KF                        G  YLP  LR L
Sbjct: 555 VELNTKAFKKMKNLKTLIIRNGKF----------------------SKGPKYLPNNLRVL 592

Query: 401 HWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSS-----IQNFKYLSALSF 455
            W  YP   LPS+F PK L    L  S           C+ S       + F  L  L+F
Sbjct: 593 EWWRYPSHCLPSDFHPKKLAICKLPFS-----------CISSFELDGLWKMFVNLRILNF 641

Query: 456 KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT 515
             C+ L   P           +F  C NLI                     V +SI  L 
Sbjct: 642 DRCEGLTQIPDVSGLPNLEEFSFECCFNLI--------------------TVHNSIGFLD 681

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
            L++L+   CKRL+       KL SL  L L  C +LE FP+IL KME+++++    + I
Sbjct: 682 KLKILNAFRCKRLRSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSI 739

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
           TELP SF+NL GL+ L                 L +L     +  AI ++PSS+ L   L
Sbjct: 740 TELPFSFQNLAGLQAL----------------ELRFL-----SPHAIFKVPSSIVLMPEL 778

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ-----------EIAYLSSLE 684
             +     KG +   +    G    G + +S   VR               +  + + ++
Sbjct: 779 TEIFVVGLKGWQWLKQE--EGEEKTGSI-VSSKVVRLTVAICNLSDEFFSIDFTWFAHMK 835

Query: 685 ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
            L LS NNF  LP  IK+   LR + + D   L+ +  +P  LK+   I+CK L S  + 
Sbjct: 836 ELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLKHFFAINCKSLTSSSIR 895

Query: 745 PFCLESLDLTGCNMLRSLP 763
            F  + L   G N +  LP
Sbjct: 896 KFLNQELHEAG-NTVFCLP 913



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 29/296 (9%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +T++P     LP LE    E C  L  + ++IG L+ L  + A      +    + L++ 
Sbjct: 647 LTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPIKLTS- 704

Query: 635 LRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIP---QEIAYLSSLEILYLSG 690
           L  L+ S C  LESFP+  +LG +  +  L +S+ ++ E+P   Q +A L +LE+ +LS 
Sbjct: 705 LEKLNLSFCYSLESFPK--ILGKMENIRQLCLSESSITELPFSFQNLAGLQALELRFLSP 762

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ-SLPVLPFCLE 749
           +    +P+ I  M +L  I +      Q L +     K   ++  K+++ ++ +     E
Sbjct: 763 HAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRLTVAICNLSDE 822

Query: 750 --SLDLTGCNMLRSL-------PELPLC------LQYLNLEDCNMLRSLPELPLCLQLLT 794
             S+D T    ++ L         LP C      L+ L++ DC  LR +  +P  L+   
Sbjct: 823 FFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLKHFF 882

Query: 795 VRNCNRLQSLPEILLCLQELDA---SVLEKLSKHSPDLQWAPESLKSAAICFEFTN 847
             NC  L S        QEL     +V     K  P  +W  +  +  +I F F N
Sbjct: 883 AINCKSLTSSSIRKFLNQELHEAGNTVFCLPGKRIP--EWFDQQSRGPSISFWFRN 936


>gi|15237409|ref|NP_199438.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177707|dbj|BAB11081.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007977|gb|AED95360.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1205

 Score =  284 bits (727), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 247/781 (31%), Positives = 358/781 (45%), Gaps = 130/781 (16%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQ-FSH----EFEGSCFVSDVRGNSETAGGLEHLQ 58
           S  V++VGIWG  GIGKTT+A+A+F+  F H    +F    F    R    +A   +H  
Sbjct: 200 SKEVKMVGIWGSSGIGKTTIARALFNNLFRHFQVRKFIDRSFAYKSREIHSSANPDDHNM 259

Query: 59  KQMLSTT-LSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           K  L  + LSE L +    I H     ER++  K+LI++DDV++   L  L+G+   FG 
Sbjct: 260 KLHLQESFLSEILRMPNIKIDHLGVLGERLQHQKVLIIIDDVDDQVILDSLVGKTQWFGN 319

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           GSRI+V T +K  L     +  ++Y V+    E A    C  AFK+   PE        V
Sbjct: 320 GSRIIVVTNNKHFLTAHGID--RMYEVSLPTEEHALAMLCQSAFKKKSPPEGFEMLVVQV 377

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
             Y    PLVL+VLGS L  K K +W  +L  L      +I  I   L+IS++ L    +
Sbjct: 378 ARYAGSLPLVLKVLGSYLSGKDKEYWIDMLPRLQNGLNDKIERI---LRISYDGLESEDQ 434

Query: 236 SIFLDIACFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSISGNFLNMHDILQEMGR 292
           +IF  IAC F   +   + S+L +S   ++V L  L+DKS++ +    + MH +LQEMGR
Sbjct: 435 AIFRHIACIFNHMEVTTIKSLLANSIYGANVGLQNLVDKSIIHVRWGHVEMHPLLQEMGR 494

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           +IVR +S  +P KR  L DP +I  VL     T  + GI L+ SKI  + +   AF  M 
Sbjct: 495 KIVRTQSIGKPRKREFLVDPNDICDVLSEGIDTQKVLGISLETSKIDELCVHESAFKRMR 554

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NLR  K     F E  +L               LP   DYLP  L+ L W  +P+R +PS
Sbjct: 555 NLRFLKIGTDIFGEENRL--------------HLPESFDYLPPTLKLLCWSEFPMRCMPS 600

Query: 413 NFKPKNLVELNLRCSKVEQPWEGE------------------------------------ 436
           NF PKNLV L +  SK+ + WEG                                     
Sbjct: 601 NFCPKNLVTLKMTNSKLHKLWEGAVPLTCLKEMDLDGSVNLKEIPDLSMATNLETLNFEN 660

Query: 437 -KACV--PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
            K+ V  PS IQN   L  L+   C SL + P+  +      I+F+ C  L  FP  S  
Sbjct: 661 CKSLVELPSFIQNLNKLLKLNMAFCNSLETLPTGFNLKSLNRIDFTKCSKLRTFPDFSTN 720

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL---KRISTSFCKLRSLVTLI--LLG 548
           ++ LYL  + IEE+PS++  L +L  +DLR  K+    K+       L+ L+ ++   L 
Sbjct: 721 ISDLYLTGTNIEELPSNLH-LENL--IDLRISKKEIDGKQWEGVMKPLKPLLAMLSPTLT 777

Query: 549 CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGS 608
            L L++ P ++                 ELP SF+NL  LEVL + +C  L+ LP  I  
Sbjct: 778 SLQLQNIPNLV-----------------ELPCSFQNLIQLEVLDITNCRNLETLPTGIN- 819

Query: 609 LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKG---LESFPRTFLLGLSAMGLLHI 665
                                     L+SLDS   KG   L SFP       + +  L++
Sbjct: 820 --------------------------LQSLDSLSFKGCSRLRSFPEIS----TNISSLNL 849

Query: 666 SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
            +  + E+P  I   S+L +  LS +    L  +   +S+L+ +   DF    +L  + L
Sbjct: 850 EETGIEEVPWWIDKFSNLGL--LSMDRCSRLKCVSLHISKLKRLGKVDFKDCGALTIVDL 907

Query: 726 C 726
           C
Sbjct: 908 C 908


>gi|297836396|ref|XP_002886080.1| hypothetical protein ARALYDRAFT_480565 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331920|gb|EFH62339.1| hypothetical protein ARALYDRAFT_480565 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1098

 Score =  284 bits (727), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 225/765 (29%), Positives = 358/765 (46%), Gaps = 148/765 (19%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V++VGI+G  GIGKTT+A+A+     ++F+ +CFV ++ G+         L+ ++   
Sbjct: 204 DGVKVVGIFGPAGIGKTTIARALHSLIFNKFQLTCFVENLSGSYSIGLDEYGLKLRLQEH 263

Query: 65  TLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
            LS+ L++ G  I H    KER+  MK+LIVLDDVN+V QL+ L  +   FG GSR++VT
Sbjct: 264 LLSKILKLDGMRISHLGAVKERLFDMKVLIVLDDVNDVKQLEALANDTTWFGPGSRVIVT 323

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           T +K +L+  R      Y V     E+A E  C +AFK++       + +++V       
Sbjct: 324 TENKEILQ--RHGIDNTYHVGFPSDEKAIEILCRYAFKQSSPRRGFKYLAKNVTWLCGNL 381

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L V+GSSL  K +  W  V+  L  I +    DI ++L++ +  L    +S+FL IA
Sbjct: 382 PLGLRVVGSSLHGKNEDEWVSVIRRLETIID---RDIEEVLRVGYESLHENEQSLFLHIA 438

Query: 243 CFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQE 298
            FF  +D D V ++L D   D+   L I+++KSL+ +S N  + MH +LQ++G+Q + ++
Sbjct: 439 VFFNNKDVDLVKAMLADDNLDIAHGLKIMVNKSLIYVSTNGEIRMHKLLQQVGKQAINRQ 498

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
              EP KR  L + +EI  VL+++KGT  + GI  D S I  + L  RA   M NLR   
Sbjct: 499 ---EPWKRLILTNAQEICHVLENDKGTGVVSGISFDTSGISEVILSNRALRRMCNLRFLS 555

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
            Y  +                    + +P+ + + P +LR LHW+ YP ++LP  F  +N
Sbjct: 556 VYKTR--------------HDGNDIMHIPDDMKF-PPRLRLLHWEAYPSKSLPLGFCLEN 600

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
           LVELN++ S++E+ WEG +      ++N K +                          + 
Sbjct: 601 LVELNMKDSQLEKLWEGTQL-----LRNLKKM--------------------------DL 629

Query: 479 SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
           S  V+L E P +S                       T+LE L+L  C  L  + TS   L
Sbjct: 630 SRSVHLKELPDLSNA---------------------TNLERLELGDCMALVELPTSIGNL 668

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
             L  L++  C++LE  P  +                        NL  LE + +  CS+
Sbjct: 669 HKLENLVMSNCISLEVIPTHI------------------------NLASLEHITMTGCSR 704

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSL---DSSHCKGLESFPRTFLL 655
           L   PD   ++E L   L   +++  +P+S++  + L      D+   K L  FP     
Sbjct: 705 LKTFPDFSTNIERL---LLRGTSVEDVPASISHWSRLSDFCIKDNGSLKSLTHFP----- 756

Query: 656 GLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN 715
                                      +E+L LS  + E++P  IK    L+ + +    
Sbjct: 757 -------------------------ERVELLTLSYTDIETIPDCIKGFHGLKSLDVAGCR 791

Query: 716 MLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLES----LDLTGC 756
            L SLPELP+ L  L  +DC   +SL ++ + L +    L+ T C
Sbjct: 792 KLTSLPELPMSLGLLVALDC---ESLEIVTYPLNTPSARLNFTNC 833



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 43/260 (16%)

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT-PITELPSSFENLPG 587
           K +   FC L +LV L +     LE   E  + + +LK++   R+  + ELP    N   
Sbjct: 590 KSLPLGFC-LENLVELNMKDS-QLEKLWEGTQLLRNLKKMDLSRSVHLKELPD-LSNATN 646

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYL-YYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
           LE L + DC  L  LP +IG+L  L   +++   ++  +P+ + L++ L  +  + C  L
Sbjct: 647 LERLELGDCMALVELPTSIGNLHKLENLVMSNCISLEVIPTHINLAS-LEHITMTGCSRL 705

Query: 647 ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
           ++FP                D++           +++E L L G + E +PA I   S+L
Sbjct: 706 KTFP----------------DFS-----------TNIERLLLRGTSVEDVPASISHWSRL 738

Query: 707 RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC------LESLDLTGCNMLR 760
               ++D   L+SL   P  ++ L L        +  +P C      L+SLD+ GC  L 
Sbjct: 739 SDFCIKDNGSLKSLTHFPERVELLTL----SYTDIETIPDCIKGFHGLKSLDVAGCRKLT 794

Query: 761 SLPELPLCLQYLNLEDCNML 780
           SLPELP+ L  L   DC  L
Sbjct: 795 SLPELPMSLGLLVALDCESL 814


>gi|351727991|ref|NP_001235644.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
 gi|223452593|gb|ACM89623.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
          Length = 1552

 Score =  284 bits (727), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 246/742 (33%), Positives = 369/742 (49%), Gaps = 86/742 (11%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            +D V++VGI GMGGIGK+TL +A++++ SH+F   C++ DV    +  G L  +QK++LS
Sbjct: 670  NDDVRVVGITGMGGIGKSTLGQALYERISHQFNSRCYIDDVSKLYQGYGTL-GVQKELLS 728

Query: 64   TTLSEK-LEVAG-PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF-----GQG 116
             +L+EK L++    N      ER+   K LI+LD+V++  QL    G  +       G+G
Sbjct: 729  QSLNEKNLKICNVSNGTLLVWERLSNAKALIILDNVDQDKQLDMFTGGRNDLLRKCLGKG 788

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            S +++ +RD+++L K  G +  IYRV  L   +A   FC  AFK N+   D    +  V+
Sbjct: 789  SIVIIISRDQQIL-KAHGVDV-IYRVEPLNDNDALGLFCKKAFKNNYMMSDFEKLTSDVL 846

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            S+ +G+PL +EVLGSSL  K   HW   L  L    E++   I ++L+ISF++L    K 
Sbjct: 847  SHCQGHPLAIEVLGSSLFDKDVLHWRSALALLR---ENKSKSIMNVLRISFDQLEDTHKE 903

Query: 237  IFLDIACFFEGEDKDFVASILDDSESD---VLDILIDKSLVSISGNFLNMHDILQEMGRQ 293
            IFLDIACFF      +V  +LD    +    L +L+DKSL+++    + MHD+L ++G+ 
Sbjct: 904  IFLDIACFFNHYPVKYVKEVLDFRGFNPEYGLQVLVDKSLITMDSRQIQMHDLLCDLGKY 963

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFL-DLSKIKGINLDPRAFTNMS 352
            IVR++S ++P K SRLWD K+I +V+  NK  D +E IFL + S I            +S
Sbjct: 964  IVREKSPRKPWKWSRLWDVKDILKVMSDNKAADNVEAIFLIEKSDI---------LRTIS 1014

Query: 353  NLRLFKFYVPKFYEIEKLPSMSTEEQLSYS------KVQLPNG-LDYLPKKLRYLHWDTY 405
             +R           ++ L +MS  + L         K+   +G L  L  +L YL W+ Y
Sbjct: 1015 TMR-----------VDVLSTMSCLKLLKLDHLDFNVKINFFSGTLVKLSNELGYLGWEKY 1063

Query: 406  PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
            P   LP +F+P  LVEL L  S ++Q WEG K  +P+       L  L   G ++L   P
Sbjct: 1064 PFECLPPSFEPDKLVELILPKSNIKQLWEGTKP-LPN-------LRRLDLSGSKNLIKMP 1115

Query: 466  SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
                 +   +++   C+ L                    EE+  SI     L  L+LR C
Sbjct: 1116 YIGDALYLESLDLEGCIQL--------------------EEIGLSIVLSPKLTSLNLRNC 1155

Query: 526  KRLKRISTSFCKLRSLVTLILLGCLNLEHF-PEILEKMEHLKRIYSDRTPITELPSSFEN 584
            K L ++   F +   L  L+L GC  L H  P I    +  +    +   +  LP+S   
Sbjct: 1156 KSLIKL-PQFGEDLILEKLLLGGCQKLRHIDPSIGLLKKLRRLNLKNCKNLVSLPNSILG 1214

Query: 585  LPGLEVLFVEDCSKLDN--LPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSH 642
            L  LE L +  CSKL N  L   +   E L  I    + I    S+ + S   +   S  
Sbjct: 1215 LNSLEDLNLSGCSKLYNTELLYELRDAEQLKKIDIDGAPI-HFQSTSSYSREHKKSVSCL 1273

Query: 643  CKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
                  FP    L LS   L+        EIP  I  +  L+ L LSGNNF +LP  +K+
Sbjct: 1274 MPSSPIFPCMLKLDLSFCNLV--------EIPDAIGIMCCLQRLDLSGNNFATLPN-LKK 1324

Query: 703  MSQLRFIHLEDFNMLQSLPELP 724
            +S+L  + L+    L+SLPELP
Sbjct: 1325 LSKLVCLKLQHCKQLKSLPELP 1346



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 188/450 (41%), Gaps = 88/450 (19%)

Query: 493  KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
            K+  L L +S I+++    + L +L  LDL G K L ++      L  L +L L GC+ L
Sbjct: 1076 KLVELILPKSNIKQLWEGTKPLPNLRRLDLSGSKNLIKMPYIGDALY-LESLDLEGCIQL 1134

Query: 553  EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
            E                       E+  S    P L  L + +C  L  LP     L   
Sbjct: 1135 E-----------------------EIGLSIVLSPKLTSLNLRNCKSLIKLPQFGEDLILE 1171

Query: 613  YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
              +L     +  +  S+ L   LR L+  +CK L S P + +LGL+++  L++S      
Sbjct: 1172 KLLLGGCQKLRHIDPSIGLLKKLRRLNLKNCKNLVSLPNS-ILGLNSLEDLNLSG----- 1225

Query: 673  IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
                 + L + E+LY    + E L  I    + + F     ++            ++   
Sbjct: 1226 ----CSKLYNTELLY-ELRDAEQLKKIDIDGAPIHFQSTSSYSR-----------EHKKS 1269

Query: 733  IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE---LPLCLQYLNLEDCNMLRSLPELPLC 789
            + C ++ S P+ P C+  LDL+ CN++  +P+   +  CLQ L+L   N   +LP L   
Sbjct: 1270 VSC-LMPSSPIFP-CMLKLDLSFCNLVE-IPDAIGIMCCLQRLDLSG-NNFATLPNLKKL 1325

Query: 790  LQL--LTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTN 847
             +L  L +++C +L+SLPE+                   P   +  + L+ A +     N
Sbjct: 1326 SKLVCLKLQHCKQLKSLPEL-------------------PSRIYNFDRLRQAGL--YIFN 1364

Query: 848  CLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFS 907
            C +L  +     +A S   ++   +  L   Y +           S +V PGSEIP WF+
Sbjct: 1365 CPELVDRERCTDMAFS-WTMQSCQVLYLCPFYHV-----------SRVVSPGSEIPRWFN 1412

Query: 908  NQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
            N+  G+ + +   P     N IG AFCA+ 
Sbjct: 1413 NEHEGNCVSLDASPVMHDHNWIGVAFCAIF 1442


>gi|295083319|gb|ADF78113.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  284 bits (727), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 259/799 (32%), Positives = 371/799 (46%), Gaps = 126/799 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V ++GI G+GGIGK+TLA A+++  +  F+GSCF+ D+R  S    GL+HLQ  
Sbjct: 205 VESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREKS-NKKGLQHLQSI 263

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +L   L EK      +E     I H    R++R K+L++LDDV++  QL+ ++G    FG
Sbjct: 264 LLREILGEKEINLASVEQGASIIQH----RLQRKKVLLILDDVDKHEQLQAIVGRPCWFG 319

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK++L       K+ Y V  L    A +     +FK              
Sbjct: 320 PGSRVIITTRDKQLLASHGV--KRTYEVELLNENNALQLLTWKSFKTEKVDPSYKEVLND 377

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV Y  G PL LEV+GS+L  K    W   +    RI   +I    +ILK+SF+ L    
Sbjct: 378 VVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQI---LEILKVSFDALEEEQ 434

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNF------LNMH 284
           K++FLDIAC F   D   V  IL     D +     +L++KSL+    ++      + MH
Sbjct: 435 KNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIVTMH 494

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG---- 340
           D++++MG++IVRQES KEP KRSRLW P++I  VL+ N+GT  IE I LD          
Sbjct: 495 DLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKEEIV 554

Query: 341 INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYL 400
           + L+ +AF  M NL+       KF                        G  YLP  LR L
Sbjct: 555 VELNTKAFKKMKNLKTLIIRNGKF----------------------SKGPKYLPNNLRVL 592

Query: 401 HWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSS-----IQNFKYLSALSF 455
            W  YP   LPS+F PK L    L  S           C+ S       + F  L  L+F
Sbjct: 593 EWWRYPSHCLPSDFHPKKLAICKLPFS-----------CISSFELDGLWKMFVNLRILNF 641

Query: 456 KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT 515
             C+ L   P           +F  C NLI                     V +SI  L 
Sbjct: 642 DRCEGLTQIPDVSGLPNLEEFSFECCFNLI--------------------TVHNSIGFLD 681

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
            L++L+   CKRL+       KL SL  L L  C +LE FP+IL KME+++++    + I
Sbjct: 682 KLKILNAFRCKRLRSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSI 739

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
           TELP SF+NL GL+ L                 L +L     +  AI ++PSS+ L   L
Sbjct: 740 TELPFSFQNLAGLQAL----------------ELRFL-----SPHAIFKVPSSIVLMPEL 778

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ-----------EIAYLSSLE 684
             +     KG +   +    G    G + +S   VR               +  + + ++
Sbjct: 779 TEIFVVGLKGWQWLKQE--EGEEKTGSI-VSSKVVRLTVAICNLSDEFFSIDFTWFAHMK 835

Query: 685 ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
            L LS NNF  LP  IK+   LR + + D   L+ +  +P  LK+   I+CK L S  + 
Sbjct: 836 ELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLKHFFAINCKSLTSSSIR 895

Query: 745 PFCLESLDLTGCNMLRSLP 763
            F  + L   G N +  LP
Sbjct: 896 KFLNQELHEAG-NTVFCLP 913



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 29/296 (9%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +T++P     LP LE    E C  L  + ++IG L+ L  + A      +    + L++ 
Sbjct: 647 LTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPIKLTS- 704

Query: 635 LRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIP---QEIAYLSSLEILYLSG 690
           L  L+ S C  LESFP+  +LG +  +  L +S+ ++ E+P   Q +A L +LE+ +LS 
Sbjct: 705 LEKLNLSFCYSLESFPK--ILGKMENIRQLCLSESSITELPFSFQNLAGLQALELRFLSP 762

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ-SLPVLPFCLE 749
           +    +P+ I  M +L  I +      Q L +     K   ++  K+++ ++ +     E
Sbjct: 763 HAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRLTVAICNLSDE 822

Query: 750 --SLDLTGCNMLRSL-------PELPLC------LQYLNLEDCNMLRSLPELPLCLQLLT 794
             S+D T    ++ L         LP C      L+ L++ DC  LR +  +P  L+   
Sbjct: 823 FFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLKHFF 882

Query: 795 VRNCNRLQSLPEILLCLQELDA---SVLEKLSKHSPDLQWAPESLKSAAICFEFTN 847
             NC  L S        QEL     +V     K  P  +W  +  +  +I F F N
Sbjct: 883 AINCKSLTSSSIRKFLNQELHEAGNTVFCLPGKRIP--EWFDQQSRGPSISFWFRN 936


>gi|297791265|ref|XP_002863517.1| hypothetical protein ARALYDRAFT_917001 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309352|gb|EFH39776.1| hypothetical protein ARALYDRAFT_917001 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1124

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 225/720 (31%), Positives = 345/720 (47%), Gaps = 85/720 (11%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D  +IVGI G+ GIGKTTLA  ++ +    F        +R +  T  G E ++K  L  
Sbjct: 24  DETRIVGIVGIPGIGKTTLAMELYKKSRQRFVRCLAFMKIR-DKWTDYGAERVRKMFLED 82

Query: 65  TLSEKLEVAGPNIPHFTKE-RVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
            L +   ++     H   E ++   K+ +VLDDV+   Q++ L+G+ +   +GSRIV+TT
Sbjct: 83  LL-QITNISDDEATHSCLESKLLSNKVFVVLDDVSSARQIEVLLGDRNWIKKGSRIVITT 141

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH---SRSVVSYTK 180
           RD+  + +    +   Y V  L   +   +F  +AF+++ C   +  +   SR  V Y +
Sbjct: 142 RDRAFIAEL---DPNPYVVPRLNLGDGLMYFSFYAFEDHVCNPGMGDYLRMSREFVDYAR 198

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           GNPL L VLG  L  K ++ W K    L +   S    I D+LKIS+ +L+ + K +FLD
Sbjct: 199 GNPLALRVLGRDLRGKDEAQWRKRRDTLAK---SPNKSIQDLLKISYGELSEQEKDMFLD 255

Query: 241 IACFFEGEDKDFVASILD--DSES-----DVLDILIDKSLVSISGNFLNMHDILQEMGRQ 293
           IACFF  ED  +  S+LD  D+ES     ++ D L  K  +SISG  + MHD+L     +
Sbjct: 256 IACFFRSEDVYYARSLLDSGDTESFRAPREITD-LSHKFFISISGGRVEMHDLLHTFAME 314

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           +    +     ++ RLW+ K I   L     T  + GI LD+S++  + LD   FT M N
Sbjct: 315 LCSLTACGVNQEKLRLWNEKSIIAALHGEMETKTVRGISLDMSEVPNMPLDRLVFTKMCN 374

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LR  K Y           S    E     K+  P+GL +  K++RYL W  +PL  LPS+
Sbjct: 375 LRYLKLY----------SSACPLECEGDCKLNFPDGLSFPLKEVRYLDWLKFPLEELPSD 424

Query: 414 FKPKNLVELNLRCSKVEQPWEGEK------------------------------------ 437
           F P+NL++L L  SK++Q W+  K                                    
Sbjct: 425 FTPENLIDLKLPYSKIKQVWKVSKDTPKLKWVDLNNSRMLQTLSGFSKAPNLLRLNLEGC 484

Query: 438 ---ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
               C+   ++  + L  L+ +GC  LR  P +++     T+  S C NL EF  IS  +
Sbjct: 485 SSLVCLSEEMRTMESLVFLNLRGCTGLRHLP-DINLSSLRTLILSGCSNLQEFRLISENL 543

Query: 495 TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
             LYL  +AIE++PS I  L  L +L+L+ C+RL  +     KL+SL  LIL GC NL+ 
Sbjct: 544 DYLYLDGTAIEDLPSEIVKLQKLILLNLKECRRLGSLPECIGKLKSLKELILSGCSNLKS 603

Query: 555 FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD---NLPDNIGSLEY 611
           FP + E ME+ + +  D T I E+P        +  L     S+ D   +L  +I  L +
Sbjct: 604 FPNVEENMENFRVLLLDGTSIEEVPKILHGNNSISFLRRLSLSRNDVISSLGSDISQLYH 663

Query: 612 LYYI----LAAASAISQLPSSVALSNMLRSLDSSHCKGLESF--PRTFLLGLSAMGLLHI 665
           L ++          +S LP +      L+ LD+  C  LE+   P  FL+ +  +  + I
Sbjct: 664 LKWLDLKYCKKLRCLSTLPPN------LQCLDAHGCISLETVTSPLAFLMPMEDIHSMFI 717


>gi|295083303|gb|ADF78105.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 259/799 (32%), Positives = 371/799 (46%), Gaps = 126/799 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V ++GI G+GGIGK+TLA A+++  +  F+GSCF+ D+R  S    GL+HLQ  
Sbjct: 205 VESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREKS-NKKGLQHLQSI 263

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +L   L EK      +E     I H    R++R K+L++LDDV++  QL+ ++G    FG
Sbjct: 264 LLREILGEKEINLASVEQGASIIQH----RLQRKKVLLILDDVDKHEQLQAIVGRPCWFG 319

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK++L       K+ Y V  L    A +     +FK              
Sbjct: 320 PGSRVIITTRDKQLLASHGV--KRTYEVELLNENNALQLLTWKSFKTEKVDPSYKEVLND 377

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV Y  G PL LEV+GS+L  K    W   +    RI   +I    +ILK+SF+ L    
Sbjct: 378 VVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQI---LEILKVSFDALEEEQ 434

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNF------LNMH 284
           K++FLDIAC F   D   V  IL     D +     +L++KSL+    ++      + MH
Sbjct: 435 KNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIVTMH 494

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG---- 340
           D++++MG++IVRQES KEP KRSRLW P++I  VL+ N+GT  IE I LD          
Sbjct: 495 DLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKEEIV 554

Query: 341 INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYL 400
           + L+ +AF  M NL+       KF                        G  YLP  LR L
Sbjct: 555 VELNTKAFKKMKNLKTLIIRNGKF----------------------SKGPKYLPNNLRVL 592

Query: 401 HWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSS-----IQNFKYLSALSF 455
            W  YP   LPS+F PK L    L  S           C+ S       + F  L  L+F
Sbjct: 593 EWWRYPSHCLPSDFHPKKLAICKLPFS-----------CISSFELDGLWKMFVNLRILNF 641

Query: 456 KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT 515
             C+ L   P           +F  C NLI                     V +SI  L 
Sbjct: 642 DRCEGLTQIPDVSGLPNLEEFSFECCFNLI--------------------TVHNSIGFLD 681

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
            L++L+   CKRL+       KL SL  L L  C +LE FP+IL KME+++++    + I
Sbjct: 682 KLKILNAFRCKRLRSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSI 739

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
           TELP SF+NL GL+ L                 L +L     +  AI ++PSS+ L   L
Sbjct: 740 TELPFSFQNLAGLQAL----------------ELRFL-----SPHAIFKVPSSIVLMPEL 778

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ-----------EIAYLSSLE 684
             +     KG +   +    G    G + +S   VR               +  + + ++
Sbjct: 779 TEIFVVGLKGWQWLKQE--EGEEKTGSI-VSSKVVRLTVAICNLSDEFFSIDFTWFAHMK 835

Query: 685 ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
            L LS NNF  LP  IK+   LR + + D   L+ +  +P  LK+   I+CK L S  + 
Sbjct: 836 ELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLKHFFAINCKSLTSSSIS 895

Query: 745 PFCLESLDLTGCNMLRSLP 763
            F  + L   G N +  LP
Sbjct: 896 KFLNQELHEAG-NTVFCLP 913



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 29/296 (9%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +T++P     LP LE    E C  L  + ++IG L+ L  + A      +    + L++ 
Sbjct: 647 LTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPIKLTS- 704

Query: 635 LRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIP---QEIAYLSSLEILYLSG 690
           L  L+ S C  LESFP+  +LG +  +  L +S+ ++ E+P   Q +A L +LE+ +LS 
Sbjct: 705 LEKLNLSFCYSLESFPK--ILGKMENIRQLCLSESSITELPFSFQNLAGLQALELRFLSP 762

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ-SLPVLPFCLE 749
           +    +P+ I  M +L  I +      Q L +     K   ++  K+++ ++ +     E
Sbjct: 763 HAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRLTVAICNLSDE 822

Query: 750 --SLDLTGCNMLRSL-------PELPLC------LQYLNLEDCNMLRSLPELPLCLQLLT 794
             S+D T    ++ L         LP C      L+ L++ DC  LR +  +P  L+   
Sbjct: 823 FFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLKHFF 882

Query: 795 VRNCNRLQSLPEILLCLQELDA---SVLEKLSKHSPDLQWAPESLKSAAICFEFTN 847
             NC  L S        QEL     +V     K  P  +W  +  +  +I F F N
Sbjct: 883 AINCKSLTSSSISKFLNQELHEAGNTVFCLPGKRIP--EWFDQQSRGPSISFWFRN 936


>gi|227438249|gb|ACP30614.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1309

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 260/825 (31%), Positives = 397/825 (48%), Gaps = 96/825 (11%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S+  VQI+G+ GMGGIGKTTLAKA +++   +FE   F+S+VR  S    GL +LQK 
Sbjct: 85  VKSTSDVQILGLHGMGGIGKTTLAKAFYNKIVADFEHRVFISNVRERSSDHDGLVNLQKS 144

Query: 61  MLSTTLSEKLEVAGPNIPH-FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           ++   L    E+   N      +E V   K+L+VLDDV++V Q+  L+GE   + +GS I
Sbjct: 145 LIKGLLRSLPEIEDVNRGRDKIRESVYEKKILVVLDDVDKVDQVDALVGEKSWYSEGSLI 204

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           V+TTRD+ +L K   ++K  Y V  L  E+A + F   + ++    E L   S+ +V  +
Sbjct: 205 VITTRDEDILSKVLVKQK--YEVRCLNEEQALKLFSYHSLRKEKPTESLLELSKKIVKIS 262

Query: 180 KGNPLVLEVLGSSLCLKRKS-HWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              PL LEV GS L  K+++  W   L  L     ++  ++ D+LK+SF+ L    K++F
Sbjct: 263 GLLPLALEVFGSLLYDKKEAKEWQTQLEKLKN---TQPGNLQDVLKLSFDSLDDEEKNVF 319

Query: 239 LDIACFFEGED--KDFVASILDD---SESDVLDILIDKSLVS-ISGNFLNMHDILQEMGR 292
           LDIAC F      K+ +  +L+    +    L +L  KSLV  +S   L MHD +++MGR
Sbjct: 320 LDIACLFLKMQIKKEEIVDVLNGCGFNAEAALSVLRQKSLVKFLSDENLWMHDQIRDMGR 379

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFT-NM 351
           Q+  +E+  +   RSRLWD  EI  VL + KGT +I+GI LD  K   +  DP A    +
Sbjct: 380 QLDLKETPGDTRMRSRLWDRAEIMTVLNNMKGTSSIQGIVLDFKK--KLATDPSADNIAL 437

Query: 352 SNLR-------LFKFYVPKFY---------------EIEKLPSMSTEEQLSYSKVQLPNG 389
            NL        +F +   KF                 +E    M+    L  + V+L   
Sbjct: 438 GNLHDNPGIRAVFSYLKNKFVGFPAEEKPKSSENTIPVEPFVPMTKLRLLQINHVELAGN 497

Query: 390 LDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY 449
           L+ LP +L+++ W   PL+ +P N   + L  L+L  S + +        V  +      
Sbjct: 498 LERLPSELKWIQWRGCPLKEVPLNLLARQLAVLDLAESAIRRIQSLHIEGVDGN------ 551

Query: 450 LSALSFKGCQSLRSFP--SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEV 507
           L  ++ +GC SL + P  SN  F+  +   F  C+ L+E                    V
Sbjct: 552 LKVVNLRGCHSLEAVPDLSNHKFLEKLV--FERCMRLVE--------------------V 589

Query: 508 PSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKR 567
           PSS+  L  L  LDLR C  L         L+SL  L L GC +L   PE +  M  LK 
Sbjct: 590 PSSVGNLRTLLHLDLRNCPNLTEFLVDVSGLKSLEKLYLSGCSSLSVLPENIGLMPCLKE 649

Query: 568 IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPS 627
           ++ D T I ELP S   L  L+ L ++ C  +  LP  IG+L  L  +  +++++  LPS
Sbjct: 650 LFLDATGIKELPDSIFRLENLQKLSLKSCRSIQELPMCIGTLTSLEELDLSSTSLQSLPS 709

Query: 628 SVALSNMLRSLDSSHCKGLESFPRT----------FLLGLSA------MGLLH-ISDYAV 670
           S+     L+ L   HC  L   P T          F+ G +       +G L  ++D++ 
Sbjct: 710 SIGDLKNLQKLSLMHCASLSKIPDTIKELKSLKKLFIYGSAVEELPLCLGSLPCLTDFSA 769

Query: 671 RE------IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
            E      +P  I  L+SL  L L     E+LPA I  +  ++ + L +   L++LPE  
Sbjct: 770 GECKLLKHVPSSIGGLNSLLELELDWTPIETLPAEIGDLHFIQKLGLRNCKSLKALPESI 829

Query: 725 LCLKYLH--LIDCKMLQSLPVLPFCLESLD---LTGCNMLRSLPE 764
             +  LH   +    ++ LP     LE+LD   +  C M++ LPE
Sbjct: 830 GNMDTLHSLFLTGANIEKLPETFGKLENLDTLRMDNCKMIKRLPE 874


>gi|7488170|pir||D71437 probable resistance gene - Arabidopsis thaliana
          Length = 2467

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 276/1017 (27%), Positives = 458/1017 (45%), Gaps = 156/1017 (15%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQK 59
            ++S +   +VGIWG  GIGK+T+ +A+F Q S +F    F++      S+ +G     +K
Sbjct: 1325 LESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWEK 1384

Query: 60   QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            ++LS  L +K       I HF   ++R++  K+LI+LDDV+ +  L+ L+G+ + FG GS
Sbjct: 1385 ELLSEILGQK----DIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLRTLVGKAEWFGSGS 1440

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI+V T+D+++L+    E   IY V       A +  C +AF +   P+D    +  V  
Sbjct: 1441 RIIVITQDRQLLKAH--EIDLIYEVKLPSQGLALKMICQYAFGKYSPPDDFKELAFEVAK 1498

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                 PL L VLGSSL  + K  W ++L +L         DI   L++S+ +L P+ + I
Sbjct: 1499 LAGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLN---RDIMKTLRVSYVRLDPKDQDI 1555

Query: 238  FLDIACFFEGEDKDFVASILDD--SESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQI 294
            F  IA  F G     +   L D  + +  L  L DKSL+ ++ N  + MH++LQ++  +I
Sbjct: 1556 FHYIAWLFNGWKVKSIKDFLGDGVNVNIRLKTLDDKSLIRLTPNDTIEMHNLLQKLATEI 1615

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNK-------------------GTDAIEGIFLDL 335
             R+ES   PGKR  L + +EI  V   N                    GT+ + GI    
Sbjct: 1616 DREESNGNPGKRRFLENAEEILDVFTDNTVSFCSLMHHFILIQRLAFDGTEKLLGIDFST 1675

Query: 336  SKIKGIN-----LDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGL 390
            S    I+     +D  +F  M NL+    +   ++            Q   ++++LPNGL
Sbjct: 1676 SSDSQIDKPFISIDENSFQGMLNLQFLNIHDHYWW------------QPRETRLRLPNGL 1723

Query: 391  DYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY- 449
             YLP+KL++L W+  PL+ LPSNFK + LVEL +  S +E+ W G +        N +  
Sbjct: 1724 VYLPRKLKWLRWENCPLKRLPSNFKAEYLVELRMENSALEKLWNGTQPLGSLKKMNLRNS 1783

Query: 450  --------------LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT 495
                          L  L    C+ L SFPS L+      +N   C  L  FP+I   + 
Sbjct: 1784 NNLKEIPDLSLATNLEELDLCNCEVLESFPSPLNSESLKFLNLLLCPRLRNFPEI---IM 1840

Query: 496  RLYLGQSAIE-EVPSSIECL--TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
            + ++    IE EV    +CL   +L  LD   C  L+R + S  +   L  L + G   L
Sbjct: 1841 QSFIFTDEIEIEVA---DCLWNKNLPGLDYLDC--LRRCNPSKFRPEHLKNLTVRGNNML 1895

Query: 553  EHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
            E   E ++ +  LKR+  S+   + E+P        LE+L + +C  L  LP  IG+L+ 
Sbjct: 1896 EKLWEGVQSLGKLKRVDLSECENMIEIPD-LSKATNLEILDLSNCKSLVMLPSTIGNLQK 1954

Query: 612  LYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS-AMGLLHISDYA 669
            LY + +   + +  LP  + LS    SL + H KG  S    F+  +S ++ +L++ D A
Sbjct: 1955 LYTLNMEECTGLKVLPMDINLS----SLHTVHLKGCSSL--RFIPQISKSIAVLNLDDTA 2008

Query: 670  VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY 729
            + E+P                          +  S+L  + +     L+  P++   ++ 
Sbjct: 2009 IEEVP------------------------CFENFSRLMELSMRGCKSLRRFPQISTSIQE 2044

Query: 730  LHLIDCKMLQSLP--VLPFC-LESLDLTGCNMLRSLPELPLCLQYL---NLEDCN-MLRS 782
            L+L D  + Q +P  +  F  L+ L+++GC ML+++      L  L   +  DC  ++ +
Sbjct: 2045 LNLADTAIEQ-VPCFIEKFSRLKVLNMSGCKMLKNISPNIFRLTRLMKVDFTDCGGVITA 2103

Query: 783  LPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC 842
            L +    ++       N+++  P+        D    ++        +   +  +   I 
Sbjct: 2104 LSDPVTTMEDQNNEKINKVEKRPKC-------DKDEDDEDEYEYEYDEDEDDEDEYGEIY 2156

Query: 843  FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEI 902
            F+F NC KL+  A   IL                                + +VLPG E+
Sbjct: 2157 FKFQNCFKLDRAARELILGSCF---------------------------KTTMVLPGGEV 2189

Query: 903  PDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLE 959
            P +F +Q+ G+S+ + LP  S     + F  C V++     +  F    V FQF+ E
Sbjct: 2190 PTYFKHQAYGNSLTVTLPQSSLSHKFLRFNACLVVEPI---THSFACMDVLFQFNGE 2243



 Score =  253 bits (645), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 287/1054 (27%), Positives = 467/1054 (44%), Gaps = 176/1054 (16%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQKQML 62
            S   ++VGIWG  GIGK+T+ +A+F Q S +F    F++      S+ +G     +K++L
Sbjct: 41   SKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPLRAFLTYKSTSGSDVSGMKLSWEKELL 100

Query: 63   STTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            S  L +K       I HF   ++R++  K+LI+LDDV+ +  LK L+G+ + FG GSRI+
Sbjct: 101  SEILGQK----DIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRII 156

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            V T+D++ L+    +   +Y V       A    C  AF ++  P+D    +  V     
Sbjct: 157  VITQDRQFLKAH--DIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDDFKELAFEVAKLAG 214

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
              PL L VLGSSL  + K  W +++  L         DI   L++S+++L  + + I+  
Sbjct: 215  HLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGLNG---DIMKTLRVSYDRLHQKDQDIY-- 269

Query: 241  IACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIVRQES 299
                        V  +L+D+    L +L +KSL+ I+ +  + MH++L+++GR+I R +S
Sbjct: 270  ------------VKDLLEDNVG--LTMLSEKSLIRITPDGHIEMHNLLEKLGREIDRAKS 315

Query: 300  EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGI---FLDLSKIKGINLDPRAFTNMSNLRL 356
            +  PGKR  L + ++I  V+    GT+ + GI   F +    + + +D  +F  M NL+ 
Sbjct: 316  KGNPGKRQFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFSTRPLLIDKESFKGMRNLQY 375

Query: 357  FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
             K                      +S    P  L YLP KLR L WD  PL++LPS FK 
Sbjct: 376  LKIG-------------------DWSDGGQPQSLVYLPLKLRLLDWDDCPLKSLPSTFKA 416

Query: 417  KNLVELNLRCSKVEQPWEGEKAC----------------VPSSIQNFKYLSALSFKGCQS 460
            + LV L ++ SK+E+ WEG                    +P  + N + L  L  +GC+S
Sbjct: 417  EYLVNLIMKYSKLEKLWEGTLPLGSLKKMNLLCSKNLKEIPD-LSNARNLEELDLEGCES 475

Query: 461  LRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVL 520
            L + PS++     +       V LI+   + G  T+       I   PS       L +L
Sbjct: 476  LVTLPSSIQNAIKLRKLHCSGVILIDLKSLEGMCTQ------GIVYFPSK------LRLL 523

Query: 521  DLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI------YSDRTP 574
                C  LKR+ ++F K+  LV L +    +LE   +  + +  LK++      Y    P
Sbjct: 524  LWNNCP-LKRLHSNF-KVEYLVKLRMENS-DLEKLWDGTQPLGRLKQMFLRGSKYLKEIP 580

Query: 575  ITELPSSFE-NLPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYI----LAAASAISQLPS 627
               L  + E N   L  L + DC KL++ P   N+ SLEYL       L    AI    S
Sbjct: 581  DLSLAINLEENAIKLIYLDISDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCS 640

Query: 628  SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMG----------------LLHISDYAVR 671
             V        +    C   ++ P     GL  +                  L++  Y   
Sbjct: 641  DVDFPEGRNEIVVEDCFWNKNLPA----GLDYLDCLMRCMPCEFRPEYLVFLNVRCYKHE 696

Query: 672  EIPQEIAYLSSLEILYLS-GNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
            ++ + I  L SLE + LS   N   +P + K  + L+ ++L +   L +LP     L+ L
Sbjct: 697  KLWEGIQSLGSLEEMDLSESENLTEIPDLSKA-TNLKHLYLNNCKSLVTLPSTIGNLQKL 755

Query: 731  HLIDCKMLQSLPVLPF-----CLESLDLTGCNMLRSLPELPLCLQYLNLEDC-------- 777
              ++ K    L VLP       LE+LDL+GC+ LR+ P +   +++L LE+         
Sbjct: 756  VRLEMKECTGLEVLPTDVNLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEILDL 815

Query: 778  -----------NMLRSLPELPLC------LQLLTVRNCNRLQSLPEI--LLCLQELDAS- 817
                       N  +SL  LP        L+ L ++ C  L+ LP    L  L  LD S 
Sbjct: 816  SKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDVNLSSLGILDLSG 875

Query: 818  ------VLEKLSKHSPDLQWAPESLKSAAIC------FEFTNCLKLNGKANNKILADSLL 865
                  V++ LS  +        +++ +  C       E+T C +  G+       D  L
Sbjct: 876  CSNCRGVIKALSDAT-----VVATMEDSVSCVPLSENIEYT-CERFWGELYGD--GDWDL 927

Query: 866  RIRHMAIASLRLGYEMAINEKLSELRGSL--IVLPGSEIPDWFSNQSSGSSICIQLPPHS 923
               +    S R  +++  + +   LR     + LPG EIP +F+ ++ G S+ + LP  S
Sbjct: 928  GTEYF---SFRNCFKLDRDARELILRSCFKPVALPGGEIPKYFTYRAYGDSLTVTLPRSS 984

Query: 924  SCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFD 957
              ++ + F  C V+D        +RY  V+F F+
Sbjct: 985  LSQSFLRFKACLVVDPLSEGKGFYRYLEVNFGFN 1018


>gi|357456931|ref|XP_003598746.1| Resistance protein [Medicago truncatula]
 gi|355487794|gb|AES68997.1| Resistance protein [Medicago truncatula]
          Length = 797

 Score =  283 bits (725), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 206/596 (34%), Positives = 294/596 (49%), Gaps = 91/596 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           K+T A+A+ +    +FE  CF++ +R  +    GL HLQ+ +LS  L EK    G     
Sbjct: 93  KSTTARAVHNLIVDQFESVCFLAGIRERA-INHGLAHLQETLLSEILGEKDIKVGDVYRG 151

Query: 80  FT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
            +  K R++R K+L++LDDV++V  L+ L G  D FG G++I++TTRDK +L        
Sbjct: 152 ISIIKRRLQRKKVLLILDDVDKVEHLRALAGGHDWFGLGTKIIITTRDKHLLATH--GIV 209

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           K+Y+V  L+ E+AFE F                     +SY  G PL LEV+GS    K 
Sbjct: 210 KVYKVKELKNEKAFELF---------------------ISYCHGLPLALEVIGSRFFGKS 248

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W   L    R+   +IH+I   LK+S++ L    K IFLDIACFF      +V  +L
Sbjct: 249 LDVWKSSLDKYERVLRKDIHEI---LKVSYDDLDEDEKGIFLDIACFFNSYKIGYVKELL 305

Query: 258 ---DDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
                   D + +L DKSL+ I  N  + MHD++Q MGR+IVRQES  EPG+RSRLW   
Sbjct: 306 YLHGFHADDGIQVLTDKSLIKIDANSCVRMHDLIQGMGREIVRQESTLEPGRRSRLWFSD 365

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           +I  VL+ NKGTD IE I  +L K + +    +AF  M NLR+          I +    
Sbjct: 366 DIFHVLEENKGTDTIEVIITNLHKDRKVKWCGKAFGQMKNLRIL---------IIRNAGF 416

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
           S + Q+             LP  LR L W  Y   +LP +F PKNLV  +LR S +++  
Sbjct: 417 SIDPQI-------------LPNSLRVLDWSGYESFSLPFDFNPKNLVIHSLRDSCLKR-- 461

Query: 434 EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
                    S+  F+ LS L F+ C+ L   PS        ++   YC NL +     G 
Sbjct: 462 -------FKSLNVFETLSFLDFEDCKFLTEIPSLSRVPNLKSLWLDYCTNLFKIHDSVGF 514

Query: 494 VTRLY-LGQSAIEEVPSSIECLT--DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
           + +L  L      ++ S + C+    LE LDLRGC RL                      
Sbjct: 515 LDKLVLLSAKGCIQLESLVPCMNLPSLEKLDLRGCSRLAS-------------------- 554

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNI 606
               FPE+L  ME+LK +Y D T + +LP +F NL GL+ LF+  C ++  +P  +
Sbjct: 555 ----FPEVLGVMENLKDVYLDETDLYQLPFTFGNLVGLQRLFLRSCQRMIQIPSYV 606



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 22/147 (14%)

Query: 726 CLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRS-LP 784
           C++   L+ C  L SL       E LDL GC+ L S PE+   ++  NL+D  +  + L 
Sbjct: 526 CIQLESLVPCMNLPSL-------EKLDLRGCSRLASFPEVLGVME--NLKDVYLDETDLY 576

Query: 785 ELPLC------LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKS 838
           +LP        LQ L +R+C R+  +P  +L   E+  S   +  + S D       + +
Sbjct: 577 QLPFTFGNLVGLQRLFLRSCQRMIQIPSYVLPKVEIVTSHHRRGVRSSNDAAKVSPKVSA 636

Query: 839 AAICF------EFTNCLKLNGKANNKI 859
            A+C        F N   LN  +NN I
Sbjct: 637 NAMCVYNEYGKSFLNVYSLNVSSNNVI 663


>gi|15235924|ref|NP_193422.1| protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 [Arabidopsis thaliana]
 gi|75097884|sp|O23530.3|SNC1_ARATH RecName: Full=Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1;
            Short=AtSNC1; AltName: Full=Disease resistance RPP5-like
            protein
 gi|5302803|emb|CAB46044.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268440|emb|CAB80960.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|332658420|gb|AEE83820.1| protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 [Arabidopsis thaliana]
          Length = 1301

 Score =  283 bits (725), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 256/906 (28%), Positives = 424/906 (46%), Gaps = 144/906 (15%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQK 59
            ++S +   +VGIWG  GIGK+T+ +A++ + S +F    F++      S+ +G     +K
Sbjct: 199  LESKEARIMVGIWGQSGIGKSTIGRALYSKLSIQFHHRAFITYKSTSGSDVSGMKLRWEK 258

Query: 60   QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            ++LS  L +K       I HF   ++R+++ K+LI+LDDV+ +  LK L+G+ + FG GS
Sbjct: 259  ELLSEILGQK----DIKIEHFGVVEQRLKQQKVLILLDDVDSLEFLKTLVGKAEWFGSGS 314

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI+V T+D+++L+    E   IY V       A    C  AF ++  P+D    +  V  
Sbjct: 315  RIIVITQDRQLLKAH--EIDLIYEVEFPSEHLALTMLCRSAFGKDSPPDDFKELAFEVAK 372

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                 PL L VLGSSL  + K  W +++  L         DI   L++S+++L  + + +
Sbjct: 373  LAGNLPLGLSVLGSSLKGRTKEWWMEMMPRLRNGLNG---DIMKTLRVSYDRLHQKDQDM 429

Query: 238  FLDIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIVR 296
            FL IAC F G +  +V  +L D+      +L +KSL+ I+ + ++ MH++L+++GR+I R
Sbjct: 430  FLYIACLFNGFEVSYVKDLLKDNVG--FTMLTEKSLIRITPDGYIEMHNLLEKLGREIDR 487

Query: 297  QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGI---FLDLSKIKGINLDPRAFTNMSN 353
             +S+  PGKR  L + ++I  V+    GT+ + GI   F +    + + +D  +F  M N
Sbjct: 488  AKSKGNPGKRRFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFSTRPLLIDKESFKGMRN 547

Query: 354  LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
            L+  +     +Y                    LP  L YLP KLR L WD  PL++LPS 
Sbjct: 548  LQYLEI---GYYG------------------DLPQSLVYLPLKLRLLDWDDCPLKSLPST 586

Query: 414  FKPKNLVELNLRCSKVEQPWEG-------------------------------------- 435
            FK + LV L ++ SK+E+ WEG                                      
Sbjct: 587  FKAEYLVNLIMKYSKLEKLWEGTLPLGSLKEMNLRYSNNLKEIPDLSLAINLEELDLVGC 646

Query: 436  -EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
                 +PSSIQN   L  L    C+ L SFP++L+      +N + C NL  FP I    
Sbjct: 647  KSLVTLPSSIQNATKLIYLDMSDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGC 706

Query: 495  TRLYL--GQSAI--------EEVPSS---IECLT----------DLEVLDLRGCKRLKRI 531
            + +    G++ I        + +P+    ++CLT           L  L++RG K  +++
Sbjct: 707  SDVDFPEGRNEIVVEDCFWNKNLPAGLDYLDCLTRCMPCEFRPEQLAFLNVRGYKH-EKL 765

Query: 532  STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
                  L SL  + L    NL   P++ +  +    I ++   +  LPS+  NL  L  L
Sbjct: 766  WEGIQSLGSLEGMDLSESENLTEIPDLSKATKLESLILNNCKSLVTLPSTIGNLHRLVRL 825

Query: 592  FVEDCSKLDNLPD--NIGSLEYL------------------YYILAAASAISQLPSSVAL 631
             +++C+ L+ LP   N+ SLE L                   ++    +AI ++PS++  
Sbjct: 826  EMKECTGLEVLPTDVNLSSLETLDLSGCSSLRSFPLISTNIVWLYLENTAIEEIPSTIGN 885

Query: 632  SNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSG 690
             + L  L+   C GLE  P    + LS++  L +S   ++R  P       S++ LYL  
Sbjct: 886  LHRLVRLEMKKCTGLEVLPTD--VNLSSLETLDLSGCSSLRSFP---LISESIKWLYLEN 940

Query: 691  NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF---- 746
               E +P + K  + L+ + L +   L +LP     L+ L   + K    L VLP     
Sbjct: 941  TAIEEIPDLSKA-TNLKNLKLNNCKSLVTLPTTIGNLQKLVSFEMKECTGLEVLPIDVNL 999

Query: 747  -CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLC------LQLLTVRNCN 799
              L  LDL+GC+ LR+ P +   + +L LE+     ++ E+P        L  L ++ C 
Sbjct: 1000 SSLMILDLSGCSSLRTFPLISTNIVWLYLENT----AIEEIPSTIGNLHRLVKLEMKECT 1055

Query: 800  RLQSLP 805
             L+ LP
Sbjct: 1056 GLEVLP 1061



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 232/538 (43%), Gaps = 127/538 (23%)

Query: 326  DAIEGIFLDLSKIK-------GINLDPRAFTNMS---NLRLFKFYVPKFYEIEKLPSMST 375
            +A + I+LD+S  K        +NL+   + N++   NLR F        +++  P    
Sbjct: 658  NATKLIYLDMSDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVD-FPEGRN 716

Query: 376  E---EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
            E   E   ++K  LP GLDYL         D    R +P  F+P+ L  LN+R  K E+ 
Sbjct: 717  EIVVEDCFWNK-NLPAGLDYL---------DCLT-RCMPCEFRPEQLAFLNVRGYKHEKL 765

Query: 433  WEGEKA---------------------------------------CVPSSIQNFKYLSAL 453
            WEG ++                                        +PS+I N   L  L
Sbjct: 766  WEGIQSLGSLEGMDLSESENLTEIPDLSKATKLESLILNNCKSLVTLPSTIGNLHRLVRL 825

Query: 454  SFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIEC 513
              K C  L   P++++     T++ S C +L  FP IS  +  LYL  +AIEE+PS+I  
Sbjct: 826  EMKECTGLEVLPTDVNLSSLETLDLSGCSSLRSFPLISTNIVWLYLENTAIEEIPSTIGN 885

Query: 514  LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT 573
            L  L  L+++ C  L+ + T    L SL TL L GC +L  FP I    E +K +Y + T
Sbjct: 886  LHRLVRLEMKKCTGLEVLPTDV-NLSSLETLDLSGCSSLRSFPLI---SESIKWLYLENT 941

Query: 574  PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY-YILAAASAISQLPSSVALS 632
             I E+P        L+ L + +C  L  LP  IG+L+ L  + +   + +  LP  V LS
Sbjct: 942  AIEEIPD-LSKATNLKNLKLNNCKSLVTLPTTIGNLQKLVSFEMKECTGLEVLPIDVNLS 1000

Query: 633  NMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNN 692
            +++  LD S C  L +FP                      I   I +L      YL    
Sbjct: 1001 SLM-ILDLSGCSSLRTFPL---------------------ISTNIVWL------YLENTA 1032

Query: 693  FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLD 752
             E +P+ I  + +L  + +++   L+ LP            D   L SL +L       D
Sbjct: 1033 IEEIPSTIGNLHRLVKLEMKECTGLEVLP-----------TDVN-LSSLMIL-------D 1073

Query: 753  LTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQ------LLTVRNCNRLQSL 804
            L+GC+ LR+ P +   ++ L L++     ++ E+P C++      +L +  C RL+++
Sbjct: 1074 LSGCSSLRTFPLISTRIECLYLQNT----AIEEVPCCIEDFTRLTVLMMYCCQRLKTI 1127



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 133/285 (46%), Gaps = 19/285 (6%)

Query: 331  IFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS---MSTEEQLSYSKVQLP 387
            ++L+ + I+ I   P    N+   RL +  + K   +E LP+   +S+ E L  S     
Sbjct: 869  LYLENTAIEEI---PSTIGNLH--RLVRLEMKKCTGLEVLPTDVNLSSLETLDLSGCSSL 923

Query: 388  NGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNF 447
                 + + +++L+ +   +  +P   K  NL  L L   K           +P++I N 
Sbjct: 924  RSFPLISESIKWLYLENTAIEEIPDLSKATNLKNLKLNNCK-------SLVTLPTTIGNL 976

Query: 448  KYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEV 507
            + L +   K C  L   P +++    + ++ S C +L  FP IS  +  LYL  +AIEE+
Sbjct: 977  QKLVSFEMKECTGLEVLPIDVNLSSLMILDLSGCSSLRTFPLISTNIVWLYLENTAIEEI 1036

Query: 508  PSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKR 567
            PS+I  L  L  L+++ C  L+ + T    L SL+ L L GC +L  FP I  ++E L  
Sbjct: 1037 PSTIGNLHRLVKLEMKECTGLEVLPTDV-NLSSLMILDLSGCSSLRTFPLISTRIECL-- 1093

Query: 568  IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
             Y   T I E+P   E+   L VL +  C +L  +  NI  L  L
Sbjct: 1094 -YLQNTAIEEVPCCIEDFTRLTVLMMYCCQRLKTISPNIFRLTRL 1137


>gi|357468821|ref|XP_003604695.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355505750|gb|AES86892.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 1121

 Score =  283 bits (725), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 240/753 (31%), Positives = 355/753 (47%), Gaps = 107/753 (14%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S+D VQ++GI+G GG+GKTTL KAI++  +H+FE  CF+ +VR NS    GLE+LQ +
Sbjct: 214 IGSNDKVQMLGIYGTGGMGKTTLGKAIYNFIAHQFECLCFLPNVRENSTKVDGLEYLQSK 273

Query: 61  MLSTTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +L  T+  ++        IP   K+R++R K+L++LDD++++ QL+ L GE D FG GSR
Sbjct: 274 VLFKTIGLEIRFGDISEGIP-IIKKRLQRKKVLLILDDIDKLKQLQVLAGEPDWFGLGSR 332

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRDK +L K  G +   Y V+GL   EA +     AFK +            VV+Y
Sbjct: 333 VIITTRDKHLL-KCHGIDI-TYEVDGLNENEALQLLRWKAFKNSTVNPSYEGILNRVVTY 390

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+GS+L  K    W  +L +  RI   EI  I   L +SFN L    +S+F
Sbjct: 391 ASGLPLALEVVGSNLFGKDIEKWKSLLDEYERIPNKEIQKI---LIVSFNNLGEYEQSVF 447

Query: 239 LDIACFFEGEDKDFVASILDDSESDVLDI----LIDKSLVSISGNFLNMHDILQEMGRQI 294
           LDIAC F+G   D V  IL       +      L+DKSL+ I  + + +HD+++ MG++I
Sbjct: 448 LDIACCFKGYSLDEVEYILCAHYGYCMKYHIGKLVDKSLIKIQLSRVTLHDLIEIMGKEI 507

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSN 353
           VR+ES  EPGKR+RLW  ++I RVLK N GT   E I LD S IK  ++ + +AF  M  
Sbjct: 508 VRKESVIEPGKRTRLWFCEDIVRVLKENTGTGNTEIIHLDFSSIKEVVDWNGKAFKKM-- 565

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
            ++ K  V K     K P                    Y P  LR L W  YP + LPS+
Sbjct: 566 -KILKTLVIKSGHFSKAPV-------------------YFPSTLRVLEWQRYPSQCLPSS 605

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY--LSALSFKGCQSLRSFPSNLHFV 471
                                  KA   S   ++K+  L  L F  C+ L   P      
Sbjct: 606 I--------------------FNKASKISLFSDYKFENLKILKFDYCEYLIDTPDVSCLP 645

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYL----GQSAIEEVPSSIECLTDLEVLDLRGCKR 527
               I+F  C NL+     +G + +L      G   +   P  +E L  LE L +  CK 
Sbjct: 646 NLEKISFQSCKNLVTIHNSTGFLNKLKFLSVEGCCKLRYFP-PLE-LISLENLQISRCKS 703

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
           L+       K+ +L  L + G  +++ FP   + +  L  I  +   +  LPS    +P 
Sbjct: 704 LQSFPKILGKIENLKYLSIYGT-SIKGFPVSFQNLTGLCNISIEGHGMFRLPSFILKMPK 762

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
           L  + V   S L  LP     L +L            + S+V   +++R+  S  C    
Sbjct: 763 LSSISVNGYSHL--LPKKNDKLSFL------------VSSTVKYLDLIRNNLSDEC---- 804

Query: 648 SFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
                                    +P  +   +++  LYLSGNNF+ LP  +K+   L 
Sbjct: 805 -------------------------LPILLRLFANVTYLYLSGNNFKILPECLKECRFLW 839

Query: 708 FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
            + L +   LQ +  +P  LK +  + C  L S
Sbjct: 840 SLQLNECKSLQEIRGIPPTLKNMSALRCGSLNS 872



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 28/284 (9%)

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHC 643
           LP LE +  + C  L  + ++ G L  L ++ +     +   P    +S  L +L  S C
Sbjct: 644 LPNLEKISFQSCKNLVTIHNSTGFLNKLKFLSVEGCCKLRYFPPLELIS--LENLQISRC 701

Query: 644 KGLESFPRTFLLG-LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
           K L+SFP+  +LG +  +  L I   +++  P     L+ L  + + G+    LP+ I +
Sbjct: 702 KSLQSFPK--ILGKIENLKYLSIYGTSIKGFPVSFQNLTGLCNISIEGHGMFRLPSFILK 759

Query: 703 MSQLRFIHLEDFNMLQSLPE--------LPLCLKYLHLIDCKML-QSLPVLPFCLES--- 750
           M +L  I +  ++ L  LP+        +   +KYL LI   +  + LP+L     +   
Sbjct: 760 MPKLSSISVNGYSHL--LPKKNDKLSFLVSSTVKYLDLIRNNLSDECLPILLRLFANVTY 817

Query: 751 LDLTGCNMLRSLPE-LPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEI 807
           L L+G N  + LPE L  C  L  L L +C  L+ +  +P  L+ ++   C  L S    
Sbjct: 818 LYLSG-NNFKILPECLKECRFLWSLQLNECKSLQEIRGIPPTLKNMSALRCGSLNSSSRS 876

Query: 808 LLCLQELDASVLEKL----SKHSPDLQWAPESLKSAAICFEFTN 847
           +L  Q+L      K     S+     +W     K   I F + N
Sbjct: 877 MLVNQQLHEGGETKFCFPSSRTETIPKWFEHQSKQPTISFWYRN 920


>gi|357513699|ref|XP_003627138.1| Resistance protein [Medicago truncatula]
 gi|355521160|gb|AET01614.1| Resistance protein [Medicago truncatula]
          Length = 1050

 Score =  283 bits (725), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 291/1037 (28%), Positives = 466/1037 (44%), Gaps = 179/1037 (17%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
            KTT+A+ +F +   E++ +CF+ +V  +     GL H++  +L   L+ +++       H
Sbjct: 67   KTTIARQMFAKHFAEYDSACFLENVSEDV-VKLGLIHVRNNLLGELLNRQIKAT----EH 121

Query: 80   FTKERVRRM---KLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
             +    RR+   K+ IVLDDVN    L+ L  +L   G  SR+++TTRDK +L    G  
Sbjct: 122  GSASIWRRLSGRKVYIVLDDVNTALILEYLCQDLYDLGPHSRLIITTRDKHIL---NGTV 178

Query: 137  KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
             +IY V   +F+E+ + F   AFK++   E     S   V Y  G PL L+VLGS    +
Sbjct: 179  DEIYEVKKWKFKESLKLFSLGAFKQSFPMEGYKRFSERAVEYAGGVPLALKVLGSFFYSR 238

Query: 197  RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
                W   L+ L +  ES +  I ++LK+S+N+L  R + +FL+IA FF+ E+KDFV  I
Sbjct: 239  NLEFWESELNHLEKKGES-LDGIQEVLKVSYNRLKERYQKMFLNIAFFFKDENKDFVIRI 297

Query: 257  LDDS---ESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
            L  S    S  + IL +K+LV+IS  N + MHD+LQ+M   IV   + K P K SRL D 
Sbjct: 298  LSASGFNASSGIQILEEKALVTISSSNRIQMHDLLQKMAFNIVH--NIKGPEKLSRLRDS 355

Query: 313  KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
            K++S +LK  K T A+EGI  DLS+   +++    F  M+ L   +FYVP    + K  S
Sbjct: 356  KKVSSILKSKKDTSAVEGIIFDLSEEVDLHIQAETFKEMTKLWFLRFYVP----LGKKRS 411

Query: 373  MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
             +              G+  +  KLRYL W  YP ++LP  F    LVE++L  S VE  
Sbjct: 412  TTLHHD---------QGIMSISDKLRYLEWSEYPFKSLPHAFCANQLVEIHLPRSNVEHI 462

Query: 433  WEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
            W+G + CV  S+ +F    +L FK  + L               N S+C+++ +      
Sbjct: 463  WDGNQVCV--SVCDF----SLKFKWGKLL--------------FNSSFCLDMFQE----- 497

Query: 493  KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
                                 L  LE ++L  CK+L        KL  L   I L CL L
Sbjct: 498  ---------------------LVSLETINLSECKKL-------IKLPDLSRAIKLKCLYL 529

Query: 553  EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
                 +     H   I+S  T +T L              ++ C KL +L      L YL
Sbjct: 530  SGCQSLCAIEPH---IFSKDTLVTVL--------------LDRCEKLQSLKSE-KHLRYL 571

Query: 613  YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
              I    +  SQL      S+ + SLD S+  G++    + +  +  +  L++    ++ 
Sbjct: 572  EKI--NVNGCSQLKEFSVFSDSIESLDLSNT-GIKILQSS-IGRMRKLVWLNLEGLRLKN 627

Query: 673  IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
            +P E++ L SL  L+L   N       I   S+L  I    F+ L+SL  L       +L
Sbjct: 628  LPNELSNLRSLTELWLCNCN-------IVTTSKLESI----FDGLESLTRL-------YL 669

Query: 733  IDCKMLQSLPVLPFCLESL-----DLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELP 787
             DC+ L  +P     L SL     D +    L +  +  L L+ ++L++C  LR LPELP
Sbjct: 670  KDCRYLIEIPANISSLSSLYELRLDGSSVKFLPANIKYVLRLEIISLDNCTKLRILPELP 729

Query: 788  LCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTN 847
              ++     NC  L ++            S L+  S           S+    I   F N
Sbjct: 730  PHIKEFHAENCTSLVTI------------STLKTFSG----------SMNGKDIYISFKN 767

Query: 848  CLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFS 907
            C  L+G + +  L D++  ++  A  ++ L  + ++  +      +   LPG  +P  F 
Sbjct: 768  CTSLDGPSLHGNLEDAISTMKSAAFHNI-LVRKYSLQTRNYNYNRAEFCLPGRRVPRQFQ 826

Query: 908  NQSSGSSICIQLPPHSSCRNLIGFAFCAVL---------DSKKVDSDCF----RYFYVSF 954
             Q+  S I I+L   S     +GF F  ++         D   +   C+    +    + 
Sbjct: 827  YQTKESCINIELSKLSYS---LGFIFSVIIAPPPINTFNDGLTIQCQCYSKDRKMVGYAS 883

Query: 955  QFDLEIKTLSETKHVDLGYNSRYIEDLI-DSDRVILGFKPCLNVGFPDGYHHTIATFKFF 1013
            ++  +  T   + H+ + Y+  YI D+I +SD   + F+  ++    +G ++   T    
Sbjct: 884  KWHHKNTTRLNSDHIFVWYDP-YISDIIWESDETNVTFEFSVSTVSAEGVYNNFMTV--- 939

Query: 1014 AERKFYKIKRCGLCPVY 1030
                   +K CG+CP+Y
Sbjct: 940  ------TMKECGICPIY 950


>gi|356514917|ref|XP_003526148.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1106

 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 242/737 (32%), Positives = 371/737 (50%), Gaps = 82/737 (11%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           + V++VGI GMGGIGK+TL +A++++ S+ F  SC++ D+       G L  +QKQ+LS 
Sbjct: 223 NDVRVVGITGMGGIGKSTLGRALYERISYRFNSSCYIDDISKLYGLEGPL-GVQKQLLSQ 281

Query: 65  TLSEK-LEVAGPNIPHFT---KERVRRMKLLIVLDDVNEVGQLKRLIGELD-----QFGQ 115
           +L E+ LE+   N+   T     R+     LIVLD+V++  QL    G  +     + G+
Sbjct: 282 SLKERNLEIC--NVSDGTILAWNRLANANALIVLDNVDQDKQLDMFTGSRNDLLRKRLGK 339

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           GS I++ +RD+++L K  G +  IY+V  L   +A   FC   FK N+   D    +  V
Sbjct: 340 GSIIIIISRDQQIL-KAHGVDV-IYQVKPLNDNDALRLFCKKVFKNNYIMSDFEKLTYDV 397

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           +S+ KG+PL +EV+GSSL  K   HW   L  L    E++   I ++L+ISF++L    K
Sbjct: 398 LSHCKGHPLAIEVVGSSLFDKDVLHWRSALTWLR---ENKSKSIMNVLRISFDQLEDTHK 454

Query: 236 SIFLDIACFFEGEDKDFVASILD----DSESDVLDILIDKSLVSISGNFLNMHDILQEMG 291
            IFLDIACFF  +  ++V  +LD    + ES +L +L+DKSL+++    + MHD+L ++G
Sbjct: 455 EIFLDIACFFNNDMVEYVKEVLDFRGFNPESGLL-VLVDKSLITMDSRVIRMHDLLCDLG 513

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           + IVR++S ++P K SRLWD K+  +V   NK  + +E I L    +    +   A + M
Sbjct: 514 KYIVREKSPRKPWKWSRLWDVKDFLKVKSDNKAAENVEAIVLSKKSVILQTMRIDALSTM 573

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
           S+L+L KF              +   Q+++S       L  L  +L YL W  YP   LP
Sbjct: 574 SSLKLLKFGYK-----------NVGFQINFSGT-----LAKLSNELGYLSWIKYPFECLP 617

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
            +F+P  LVEL L  S ++Q WEG K  +P+       L  L   G ++L   P     +
Sbjct: 618 PSFEPDKLVELRLPYSNIKQLWEGTKP-LPN-------LRRLDLFGSKNLIKMPYIEDAL 669

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
              ++N   C+ L                    EE+  SI     L  L+LR CK L ++
Sbjct: 670 YLESLNLEGCIQL--------------------EEIGLSIVLSPKLTSLNLRNCKSLIKL 709

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEV 590
              F +   L  L+L GC  L H    +  ++ L+ +   +   +  LP+S   L  L+ 
Sbjct: 710 -PRFGEDLILGKLVLEGCRKLRHIDPSIGLLKKLRELNLKNCKNLVSLPNSILGLNSLQY 768

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA-LSNMLRSLDSSHCKGLES- 648
           L +  CSK+ N          L Y L  A  + ++    A +     S DS   K   S 
Sbjct: 769 LNLSGCSKVYNTE--------LLYELRDAEQLKKIDKDGAPIHFQSTSSDSRQHKKSVSC 820

Query: 649 -FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
             P + +     M  L +S   + EIP  I  +S LE L LSGNNF +LP  +K++S+L 
Sbjct: 821 LMPSSPIF--QCMRELDLSFCNLVEIPDAIGIMSCLERLDLSGNNFATLPN-LKKLSKLV 877

Query: 708 FIHLEDFNMLQSLPELP 724
            + L+    L+SLPELP
Sbjct: 878 CLKLQHCKQLKSLPELP 894



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 186/451 (41%), Gaps = 84/451 (18%)

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
           K+  L L  S I+++    + L +L  LDL G K L ++      L  L +L L GC+ L
Sbjct: 624 KLVELRLPYSNIKQLWEGTKPLPNLRRLDLFGSKNLIKMPYIEDAL-YLESLNLEGCIQL 682

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           E                       E+  S    P L  L + +C  L  LP     L   
Sbjct: 683 E-----------------------EIGLSIVLSPKLTSLNLRNCKSLIKLPRFGEDLILG 719

Query: 613 YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
             +L     +  +  S+ L   LR L+  +CK L S P + +LGL+++  L++S      
Sbjct: 720 KLVLEGCRKLRHIDPSIGLLKKLRELNLKNCKNLVSLPNS-ILGLNSLQYLNLSG----- 773

Query: 673 IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
                + + + E+LY    + E L  I K  + + F      +            ++   
Sbjct: 774 ----CSKVYNTELLY-ELRDAEQLKKIDKDGAPIHFQSTSSDSR-----------QHKKS 817

Query: 733 IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE---LPLCLQYLNLEDCNMLRSLPELPLC 789
           + C ++ S P+   C+  LDL+ CN++  +P+   +  CL+ L+L   N   +LP L   
Sbjct: 818 VSC-LMPSSPIFQ-CMRELDLSFCNLVE-IPDAIGIMSCLERLDLSG-NNFATLPNLKKL 873

Query: 790 LQL--LTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTN 847
            +L  L +++C +L+SLPE+         S +E  +         P             N
Sbjct: 874 SKLVCLKLQHCKQLKSLPEL--------PSRIEIPT---------PAGYFGNKAGLYIFN 916

Query: 848 CLKLNGKANNKILADSLLRIRHMAIA-SLRLGYEMAINEKLSELRGSLIVLPGSEIPDWF 906
           C KL  +           R  +MA +  ++L  ++ I   L       +  PGSEIP WF
Sbjct: 917 CPKLVDRE----------RCTNMAFSWMMQLCSQVCILFSLWYYHFGGVT-PGSEIPRWF 965

Query: 907 SNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
           +N+  G+ + +   P    RN IG AFCA+ 
Sbjct: 966 NNEHEGNCVSLDASPVMHDRNWIGVAFCAIF 996


>gi|399920225|gb|AFP55572.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1076

 Score =  283 bits (724), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 244/764 (31%), Positives = 348/764 (45%), Gaps = 143/764 (18%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTTL + ++++ SH+FE   F+++VR  S+T  GL  LQKQ+LS  L E+  V   N+  
Sbjct: 230 KTTLGRLVYEKISHQFEVCIFLANVREASKTTHGLVDLQKQILSQILKEE-NVQVWNVYS 288

Query: 80  ---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
                K  V    +L+VLDDV++  QL  L+GE D FG  SRI++TTR++ VL    G E
Sbjct: 289 GITMIKRCVCNKAVLLVLDDVDQSEQLAILVGEKDCFGLRSRIIITTRNRHVLVT-HGVE 347

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
           K  Y + GL  +EA + F   AF +    ED     +  V+   G PL L++LGS L  +
Sbjct: 348 KP-YELKGLNEDEALQLFSWKAFTKCEPEEDYAELCKRFVTCAAGLPLALKILGSFLYKR 406

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
               W      L    ++    +++ILKISF+ L    K IFLDIACF      +F+  +
Sbjct: 407 SLDSWSSAFQKLK---QTPNPTVFEILKISFDGLDEMEKKIFLDIACFRRLYRNEFMIEL 463

Query: 257 LDDSE---SDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           +D S+        +L +KSL++IS  N +++HD++ EMG +IVRQE+ KEPG RSRL   
Sbjct: 464 VDSSDPCNRITRSVLAEKSLLTISSDNQVDVHDLIHEMGCEIVRQEN-KEPGGRSRLCLR 522

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
             I  V   N GT+AIEGI L L K++  + +   F+ M  L+L   +            
Sbjct: 523 DHIFHVFTKNTGTEAIEGILLHLDKLEEADWNLETFSKMCKLKLLYIH------------ 570

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
                      ++L  G  +LP  LR+L+W  YP ++LP  F+P  L EL+L  S ++  
Sbjct: 571 ----------NLRLSVGPKFLPNALRFLNWSWYPSKSLPPCFQPDELTELSLVHSNIDHL 620

Query: 433 WEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
           W G+           KYL  L                     +I+ SY +NL   P  + 
Sbjct: 621 WNGK-----------KYLRNLK--------------------SIDLSYSINLTRTPDFT- 648

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
                                  +LE L L GC  L +I  S   L+ L       C ++
Sbjct: 649 --------------------VFPNLEKLVLEGCTNLVKIHPSIALLKRLKLCNFRNCKSI 688

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           +  P  L                        N+  LE   +  CSKL  +P+ +G  + L
Sbjct: 689 KSLPSEL------------------------NMEFLETFDISGCSKLKKIPEFVGQTKRL 724

Query: 613 YYILAAASAISQLPSSVA-LSNMLRSLDSS-----------------HCKGLESFPR--- 651
             +    +A+ +LPSS+  LS  L  LD S                        FPR   
Sbjct: 725 SKLCLGGTAVEKLPSSIEHLSESLVELDLSGIVIREQPHSLFFKQNFRVSSFGLFPRKSP 784

Query: 652 -------TFLLGLSAMGLLHISDYAV--REIPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
                    L   S++  L ++D  +   EIP +I  LSSL  L L GNNF SLPA I  
Sbjct: 785 HPLIPLLASLKQFSSLTELKLNDCNLCEGEIPNDIGSLSSLRKLELRGNNFVSLPASIHL 844

Query: 703 MSQLRFIHLEDFNMLQSLPELPLCLKYLHLID-CKMLQSLPVLP 745
           +S+L  I +E+   LQ LPELP     L   D C  LQ  P  P
Sbjct: 845 LSKLEVITVENCTRLQQLPELPASDYILVKTDNCTSLQVFPDPP 888


>gi|297791235|ref|XP_002863502.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309337|gb|EFH39761.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1161

 Score =  283 bits (724), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 216/685 (31%), Positives = 337/685 (49%), Gaps = 64/685 (9%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +D     +I+G+ GM GIGKTTL K +FD +  +F    F+  +R NS   G L+ L + 
Sbjct: 221 VDRYKGTRIIGVVGMPGIGKTTLLKELFDLWQRKFNSRAFIDQIRENSNDPG-LDSLPQM 279

Query: 61  MLST---TLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +L     +L +       +     K+++   ++L++LDDV++  Q+  L    D   +GS
Sbjct: 280 LLGELLPSLKDPEIDDDEDPYRKYKDQLLERRVLVILDDVSKSEQIDALFRRRDWISEGS 339

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPE---DLNWHSRS 174
           RIV+ T D  +L   +G  +  Y V  L  ++  + F   AF  N       D N  S  
Sbjct: 340 RIVIATNDMSLL---KGLVQDTYVVRQLNHQDGMDLFHYHAFNSNRATPPKGDFNKMSED 396

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
            V Y KG+PL L++LG  LC K ++ W +    L  + +S    I  +L++S+ +L+P  
Sbjct: 397 FVHYAKGHPLALKILGIELCGKERTTWEE---KLKLLAKSPSPYIGSVLQVSYEELSPGQ 453

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSE------SDVLDILIDKSLVSISGNFLNMHDILQ 288
           K  FLDIACF   ED D+V S+L  S+       + +  L DK L++     + MHD+L 
Sbjct: 454 KDAFLDIACF-RSEDVDYVESLLASSDLGSAEAMNAVKALADKCLINTCDGRVEMHDLLY 512

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISR-----VLKHNKGTDAIEGIFLDLSKIKG-IN 342
              R++  + S     +  RLW  KE+ R     VL++      + GIFLDLS++KG  +
Sbjct: 513 TFARELDSKAST--CSRERRLWHHKELIRGGDVDVLQNKMRAANVRGIFLDLSEVKGETS 570

Query: 343 LDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHW 402
           LD   F  M+ LR  KFY           S    +  + +K+ + +GL    K++R LHW
Sbjct: 571 LDKDHFKCMTKLRYLKFY----------NSHCPHKCKTNNKINILDGLMLTLKEVRCLHW 620

Query: 403 DTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA---------------CVPSSIQNF 447
             +PL  LP++F P NLV+L L  S+++Q WEG+K                C  S +   
Sbjct: 621 LKFPLEKLPNDFYPNNLVDLKLPYSEIKQLWEGDKDIPVLKWVDLNHSSKLCSLSGLSKA 680

Query: 448 KYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEV 507
           + L  L+ +GC SL+S   +++     T+  S C N  EFP I   +  LYL  +AI ++
Sbjct: 681 QNLQVLNLEGCTSLKSL-GDVNSKSLKTLTLSGCSNFKEFPLIPENLEALYLDGTAISQL 739

Query: 508 PSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKR 567
           P ++  L  L  L+++ C++LK I T   +L+SL  L+L GCL L+ F EI      LK 
Sbjct: 740 PDNLVNLQRLVSLNMKDCQKLKNIPTFVGELKSLQKLVLSGCLKLKEFSEI--NKSSLKF 797

Query: 568 IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLP 626
           +  D T I  +P     LP ++ L +     L  LP  I  L  L  + L     ++ +P
Sbjct: 798 LLLDGTSIKTMP----QLPSVQYLCLSRNDNLSYLPAGINQLSQLTRLDLKYCKKLTSIP 853

Query: 627 SSVALSNMLRSLDSSHCKGLESFPR 651
               L   L+ LD+  C  L +  +
Sbjct: 854 E---LPPNLQYLDAHGCSSLNTVAK 875



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 188/470 (40%), Gaps = 96/470 (20%)

Query: 584  NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
            N   L+ L +  CS     P    +LE LY      +AISQLP ++     L SL+   C
Sbjct: 701  NSKSLKTLTLSGCSNFKEFPLIPENLEALYL---DGTAISQLPDNLVNLQRLVSLNMKDC 757

Query: 644  KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN-NFESLPAIIKQ 702
            + L                        + IP  +  L SL+ L LSG    +    I K 
Sbjct: 758  QKL------------------------KNIPTFVGELKSLQKLVLSGCLKLKEFSEINK- 792

Query: 703  MSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSL 762
             S L+F+ L D   ++++P+LP  ++YL L     L  LP            G N L  L
Sbjct: 793  -SSLKFLLL-DGTSIKTMPQLP-SVQYLCLSRNDNLSYLPA-----------GINQLSQL 838

Query: 763  PELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKL 822
              L       +L+ C  L S+PELP  LQ L    C+ L +              V + L
Sbjct: 839  TRL-------DLKYCKKLTSIPELPPNLQYLDAHGCSSLNT--------------VAKPL 877

Query: 823  SKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMA 882
            ++  P +Q            F FTNC  L   A ++I   S  + +   ++  R  Y   
Sbjct: 878  ARIMPTVQ--------NRCTFNFTNCDNLEQAAMDEIT--SFAQSKCQFLSDARKHY--- 924

Query: 883  INEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKV 942
             NE  S         PG E+P WFS++  GS +  +L PH   ++L G A CAV+ S   
Sbjct: 925  -NEGFSSEALFTTCFPGCEVPSWFSHEERGSLMQRKLLPHWHDKSLSGIALCAVV-SFPA 982

Query: 943  DSDCFRYFYVSFQFDLEIKTLSETKHV-DLGYNSRYIEDLIDSDRVILGFKP------CL 995
                   F V+  F ++++  S       +G      ED I+SD V + +        CL
Sbjct: 983  GQTQISSFSVACTFTIKVQEKSWIPFTCQVGSWEGDKEDKIESDHVFIAYITCPHTIRCL 1042

Query: 996  NVGFPDGYHHTIATFKF-----FAERKFYKIKRCGLCPVYANPSETKDNT 1040
                 D  + T A+ +F      +E   + + RCGL  VYA     KDN 
Sbjct: 1043 EDENSDKCNFTEASLEFNVTGGTSEIGKFTVLRCGLSLVYA-----KDNN 1087


>gi|9279731|dbj|BAB01321.1| disease resistance protein RPP1-WsB [Arabidopsis thaliana]
          Length = 1285

 Score =  283 bits (724), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 258/877 (29%), Positives = 394/877 (44%), Gaps = 116/877 (13%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-LQKQMLS 63
            D V+++GIWG  GIGKTT+A+ +  Q S  F+ S  + +++    +    E+ +Q Q+ +
Sbjct: 221  DDVRMIGIWGPPGIGKTTIARFLLSQVSKSFQLSTIMVNIKECYPSPCLDEYSVQLQLQN 280

Query: 64   TTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
              LS+ +      IPH    +ER++  K+ +VLDDV+++GQL  L  E   FG GSRI++
Sbjct: 281  KMLSKMINQKDIMIPHLGVAQERLKDKKVFLVLDDVDQLGQLDALAKETRWFGPGSRIII 340

Query: 122  TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
            TT + R+L   R     IY+V     +EAF+ FC  AF + H        SR V     G
Sbjct: 341  TTENLRLLMAHRINH--IYKVEFSSTDEAFQIFCMHAFGQKHPYNGFYELSREVTELAGG 398

Query: 182  NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
             PL L+V+GSSL    K  W + L  L    + +I     IL  S+  L+   K +FL I
Sbjct: 399  LPLGLKVMGSSLRGMSKQEWKRTLPRLRTCLDGKIE---SILMFSYEALSHEDKDLFLCI 455

Query: 242  ACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
            ACFF  +    V   L D   DV   L +L +KSL+ I      MH +L ++GR+I   +
Sbjct: 456  ACFFNYQKIKKVEKHLADRFLDVRQGLYVLAEKSLIHIGTGATEMHTLLVQLGREIAHTQ 515

Query: 299  SEKEPGKRSRLWDPKEISRVLKHNK--GTDAIEGIFLDLSKI--KGINLDPRAFTNMSNL 354
            S  +P K   L D +EI   L       +  I G+  DLSK   +  N+  +    MSNL
Sbjct: 516  STNDPRKSLFLVDEREICEALSDETMDSSRRIIGMDFDLSKNGEEVTNISEKGLQRMSNL 575

Query: 355  RLFKF---YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            +  +F      +      +   S         V     L+Y  +++R LHW  +    LP
Sbjct: 576  QFIRFDGRSCARHSSNLTVVRSSDNNCAHPDTVNALQDLNYQFQEIRLLHWINFRRLCLP 635

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLS-------------------- 451
            S F P+ LVELN+  S     WEG KA     ++N K++                     
Sbjct: 636  STFNPEFLVELNMPSSTCHTLWEGSKA-----LRNLKWMDLSYSISLKELPDLSTATNLE 690

Query: 452  -------ALSFKGCQSLRSFPS---------NLHFVC------PVTI------------- 476
                   +L    C SL   PS         NL   C      P++I             
Sbjct: 691  ELILKYCSLDLNECSSLVELPSSIGNAINLQNLDLGCLRLLKLPLSIVKFTNLKKFILNG 750

Query: 477  -------------------NFSYCVNLIEFPQISGKVTRL----YLGQSAIEEVPSSIEC 513
                               +   C +L+E P   G    L        S++ ++PS I  
Sbjct: 751  CSSLVELPFMGNATNLQNLDLGNCSSLVELPSSIGNAINLQNLDLSNCSSLVKLPSFIGN 810

Query: 514  LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDR 572
             T+LE+LDLR C  L  I TS   + +L  L L GC +L   P  +  +  L+ +   + 
Sbjct: 811  ATNLEILDLRKCSSLVEIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNC 870

Query: 573  TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVAL 631
            + + +LPSSF +   L  L +  CS L  LP +IG++  L  + L   S + +LPSS+  
Sbjct: 871  SNLVKLPSSFGHATNLWRLDLSGCSSLVELPSSIGNITNLQELNLCNCSNLVKLPSSIGN 930

Query: 632  SNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN 691
             ++L +L  + C+ LE+ P    + L ++  L ++D +  +   EI+  +++E LYL G 
Sbjct: 931  LHLLFTLSLARCQKLEALPSN--INLKSLERLDLTDCSQFKSFPEIS--TNIECLYLDGT 986

Query: 692  NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC---- 747
              E +P+ IK  S+L  +H+  F  L+    +   + +L   +        V P+     
Sbjct: 987  AVEEVPSSIKSWSRLTVLHMSYFEKLKEFSHVLDIITWLEFGE----DIQEVAPWIKEIS 1042

Query: 748  -LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSL 783
             L  L L  C  L SLP+LP  L  +N E C  L +L
Sbjct: 1043 RLHGLRLYKCRKLLSLPQLPESLSIINAEGCESLETL 1079


>gi|357468491|ref|XP_003604530.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505585|gb|AES86727.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 950

 Score =  283 bits (724), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 228/657 (34%), Positives = 330/657 (50%), Gaps = 75/657 (11%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+ IF Q   +++G CF+  V    +  GG+  L++ +LS  L E ++     I  
Sbjct: 67  KTTIAEEIFSQNRSDYDGCCFLEKVSERLKAHGGIGSLKESLLSELLKESVKELSSGI-- 124

Query: 80  FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKI 139
             + R+ RMK+LIVLDDVNE   L+ L G LD F   SRI+VT+R+K+VL     +   +
Sbjct: 125 --ERRIGRMKVLIVLDDVNETDLLEMLFGSLDWFRLDSRIIVTSRNKQVLVTNEVDNDDL 182

Query: 140 YRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKS 199
             V  L+  EA E F   AFK++H   +    S  V+ Y KG PLVL+VL   L  K K 
Sbjct: 183 CEVRVLDSSEALELFNLNAFKQSHLEMEYYELSERVIEYAKGVPLVLKVLAHMLRGKCKE 242

Query: 200 HWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGED--KDFVASIL 257
            W   L  L R+    I  ++D++++S++ L    +  FLDIACFF G D   D++  +L
Sbjct: 243 VWESKLDKLKRL---PIPKVHDVMRLSYDDLDRLEQKYFLDIACFFNGLDLELDYMKHLL 299

Query: 258 DDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
            D +SD      L+ L DK+L++IS  N ++MHDILQEMG ++VRQES  + GK SRLWD
Sbjct: 300 KDCDSDNYVAGGLETLKDKALITISEDNVISMHDILQEMGWEVVRQES-SDLGKCSRLWD 358

Query: 312 PKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
             +I  VLK++KG+DAI  I +D  + + + L P  F  M+NL+   F+V  F +   L 
Sbjct: 359 VDDIFDVLKNDKGSDAIRSIRVDFLENRKLKLSPHVFDKMTNLQFLNFWVD-FDDYLDL- 416

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
                          P GL+  P  LRYLHW  YPL++ P  F  +NLV L+L  S++E+
Sbjct: 417 --------------FPQGLESFPTGLRYLHWVCYPLKSFPEKFSAENLVILDLYLSRMEK 462

Query: 432 PWEGEKACVP-----------------SSIQNFKYLSA---------------------L 453
            W G +  V                  S   N K L+                      L
Sbjct: 463 LWCGVQNLVNLKEVTISLASLKELPDFSKATNLKVLTVTVCPNLESVHPSIFTLEKLVRL 522

Query: 454 SFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIEC 513
              GC+SL +F SN +      ++ S C  L EF      +  L L    I  +PSS  C
Sbjct: 523 DLGGCRSLTTFTSNSNLSSLHYLSLSGCEKLSEFSVTLENIVELDLSWCPINALPSSFGC 582

Query: 514 LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT 573
            ++LE L L+  + ++ I +S   L  L  L + GC  L   PE+   +E L     +  
Sbjct: 583 QSNLETLVLKATQ-IESIPSSIKDLTRLRKLNICGCKKLLALPELPLSVEILDLRSCN-- 639

Query: 574 PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA 630
            I  +PSS +NL  L  L +   +KL  LP+   S+E L     +  ++   PS+VA
Sbjct: 640 -IEIIPSSIKNLTRLRKLDIRFSNKLLALPELSSSVEILLVHCDSLKSV-LFPSTVA 694



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 115/488 (23%), Positives = 218/488 (44%), Gaps = 76/488 (15%)

Query: 559  LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LA 617
            ++ + +LK +      + ELP  F     L+VL V  C  L+++  +I +LE L  + L 
Sbjct: 467  VQNLVNLKEVTISLASLKELPD-FSKATNLKVLTVTVCPNLESVHPSIFTLEKLVRLDLG 525

Query: 618  AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI 677
               +++   S+  LS++     S  C+ L  F  T    L  +  L +S   +  +P   
Sbjct: 526  GCRSLTTFTSNSNLSSLHYLSLSG-CEKLSEFSVT----LENIVELDLSWCPINALPSSF 580

Query: 678  AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM 737
               S+LE L L     ES+P+ IK +++LR +++     L +LPELPL ++ L L  C  
Sbjct: 581  GCQSNLETLVLKATQIESIPSSIKDLTRLRKLNICGCKKLLALPELPLSVEILDLRSC-- 638

Query: 738  LQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRN 797
              ++ ++P  ++       N+ R        L+ L++   N L +LPEL   +++L V +
Sbjct: 639  --NIEIIPSSIK-------NLTR--------LRKLDIRFSNKLLALPELSSSVEILLV-H 680

Query: 798  CNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANN 857
            C+ L+S+           ++V E+  ++  +++              F NCL L+ ++  
Sbjct: 681  CDSLKSVL--------FPSTVAEQFKENKKEVK--------------FWNCLNLDERSLI 718

Query: 858  KI---LADSLLRIRHMAIASLRLG--YEMAINEKLS-ELRGSLIVLPGSEIPDWF----S 907
             I   L  +L++  +  ++++      E  ++ K + +   +L V  GS +PDWF    +
Sbjct: 719  NIGLNLQINLMKFAYQDLSTVEHDDYVETYVDYKDNFDSYQALYVYSGSSVPDWFEYKTT 778

Query: 908  NQSSGSSICIQLPPHSSCRNLIGFAFCAVLD-----SKKVDSDCFRYFYVSFQFDLEIKT 962
            N+++   + + L P      L+GF FC +L       KKV+   F    +  + D E   
Sbjct: 779  NETTNDDMIVDLSPLHL-SPLLGFVFCFILPENEEYDKKVE---FNITTIDVEGDGEKDG 834

Query: 963  LSETKHVDLGYNSRYIEDLIDSDRVILGF-KPCLNVGFPDGYHHTIATFKFFAERKFYKI 1021
             +    ++  +N++       SD V + + +PC         + T    K  A     K+
Sbjct: 835  FNIYTDLEHVFNTQ-------SDHVCMIYDQPCSQYLTRIAKNQTSFKIKVTARSSVLKL 887

Query: 1022 KRCGLCPV 1029
            K  G+ P+
Sbjct: 888  KGFGMSPI 895


>gi|356559294|ref|XP_003547935.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1075

 Score =  283 bits (724), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 249/742 (33%), Positives = 361/742 (48%), Gaps = 112/742 (15%)

Query: 20  KTTLAKAIFDQF--SHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK---LEVAG 74
           K+TLA+A++++   + +F+G CF+++VR NS+  G LE LQ+++L   L EK   L    
Sbjct: 224 KSTLARAVYNELIIAEKFDGLCFLANVRENSDKHG-LERLQEKLLLEILGEKNISLTSKE 282

Query: 75  PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRG 134
             IP   + R+   K+L++LDDV++  QL+ + G    FG GS+I++TTRDK++L     
Sbjct: 283 QGIP-IIESRLTGKKILLILDDVDKREQLQAIAGRPGWFGPGSKIIITTRDKQLLTSH-- 339

Query: 135 EEKKIYRVNGLEFEEAFEHFCNFAFK-ENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSL 193
           E  K Y +  L+ ++A +     AFK E  CP  +    R VV+Y  G PLVL+V+GS L
Sbjct: 340 EVYKKYELKELDEKDALQLLTWEAFKKEKACPTYVEVLHR-VVTYASGLPLVLKVIGSHL 398

Query: 194 CLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFV 253
             K    W   +    RI + EI    DIL++SF+ L    K +FLDIAC F+G     V
Sbjct: 399 VGKSIQEWESAIKQYKRIPKKEI---LDILRVSFDALEEEEKKVFLDIACCFKGWRLKEV 455

Query: 254 ASILDDSESDVLD----ILIDKSLVSISG--NFLNMHDILQEMGRQIVRQESEKEPGKRS 307
             IL D   D +     +L+ KSL+ +SG  + +NMHD++Q+MG++I  QES ++PGKR 
Sbjct: 456 EHILRDGYDDCMKHHIGVLVGKSLIKVSGWDDVVNMHDLIQDMGKRI-DQESSEDPGKRR 514

Query: 308 RLWDPKEISRVLKHNKGTDAIEGIFLDLS---KIKGINLDPRAFTNMSNLRLFKFYVPKF 364
           RLW  K+I  VL+ N G+  IE I LDLS   K   I  +  AF  M NL++      KF
Sbjct: 515 RLWLTKDIIEVLEGNSGSREIEMICLDLSLSEKEATIEWEGDAFKKMKNLKILIIRNGKF 574

Query: 365 YEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNL 424
                                   G +Y P+ LR L W  YP   LPSNF PK L    L
Sbjct: 575 ----------------------SKGPNYFPESLRLLEWHRYPSNCLPSNFPPKELAICKL 612

Query: 425 RCSKVEQPWEGEKACVPS-----SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV----T 475
                       ++C+ S     S + F+ L  L F  C+    F + +H V  +     
Sbjct: 613 -----------PQSCITSFGFHGSRKKFRNLKVLKFNKCE----FLTEIHDVSDLPNLEE 657

Query: 476 INFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF 535
           ++F  C NLI                     V  SI  L+ L++L+  GC++L    T+F
Sbjct: 658 LSFDGCGNLIT--------------------VHHSIGFLSKLKILNATGCRKL----TTF 693

Query: 536 --CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
               L SL TL L  C +LE+FPEIL +M++L  +      + ELP SF+NL GL+ L +
Sbjct: 694 PPLNLTSLETLQLSSCSSLENFPEILGEMKNLTSLKLFDLGLKELPVSFQNLVGLKTLSL 753

Query: 594 EDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF 653
            DC  L  LP NI  +  L  + A +    Q   S      + S+    C  +  F    
Sbjct: 754 GDCGIL-LLPSNIVMMPKLDILWAKSCEGLQWVKSEEREEKVGSI---VCSNVYHF---- 805

Query: 654 LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLED 713
               S  G     D+      Q    L  ++ L L  NNF  LP  IK++  LR + +  
Sbjct: 806 ----SVNGCNLYDDFFSTGFVQ----LDHVKTLSLRDNNFTFLPESIKELQFLRKLDVSG 857

Query: 714 FNMLQSLPELPLCLKYLHLIDC 735
              LQ +  +P  LK     +C
Sbjct: 858 CLHLQEIRGVPPNLKEFTAGEC 879


>gi|399920205|gb|AFP55552.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1144

 Score =  283 bits (723), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 244/748 (32%), Positives = 364/748 (48%), Gaps = 112/748 (14%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNI-- 77
           KTTLA  ++++ SH+FE   F+++VR  S+T  GL  LQKQ+LS  L E+  V   N+  
Sbjct: 230 KTTLAGLVYEKISHQFEVCIFLANVREVSKTTHGLVDLQKQILSQILKEE-NVQVWNVYS 288

Query: 78  -PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
             +  K  V    +L+VLDDV++  QL+  +GE D FG  SRI++TTRD+RVL     E 
Sbjct: 289 GRNMIKRCVCNKAVLLVLDDVDQSEQLENFVGEKDCFGLRSRIIITTRDRRVLVTHGVE- 347

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
            K Y + G+   EA + F   AF++    ED     +S V+Y  G PL L++LGS L  +
Sbjct: 348 -KPYELKGINEHEALQLFSWKAFRKCEPEEDYAELCKSFVTYAGGLPLALKILGSFLKGR 406

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
               W   L  L +  +     ++ ILK+SF+ L    K IFLDIACF      +F+  +
Sbjct: 407 TPDEWNSALAKLQQTPDI---TVFKILKMSFDGLDEMEKKIFLDIACFRRLYSNEFMIEL 463

Query: 257 LDDSE---SDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           +D S+        +L +KSL++IS +  +++HD++ EMG +IVRQE+E E G RSRL   
Sbjct: 464 VDSSDPCNRITRRVLAEKSLLTISSDSQVHVHDLIHEMGCEIVRQENE-ESGGRSRLCLR 522

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
            +I  V   N GT+AIEGI LDL++++  + +  AF+ M  L+L   +            
Sbjct: 523 DDIFHVFTKNTGTEAIEGILLDLAELEEADWNLEAFSKMCKLKLLYIH------------ 570

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
                      ++L  G   LP  LR+L W  YP ++LP  F+P+ L EL+L  S ++  
Sbjct: 571 ----------NLRLSVGPKCLPNALRFLSWSWYPSKSLPPCFQPEELTELSLVHSNIDHL 620

Query: 433 WEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
           W G            KYL  L                     +I+ SY +NL   P  +G
Sbjct: 621 WNG-----------IKYLGKLK--------------------SIDLSYSINLTRTPDFTG 649

Query: 493 --KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
              + +L L G + + ++  SI  L  L++ + R CK +KR+ +    +  L T  + GC
Sbjct: 650 ISNLEKLILEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKRLPSEV-NMEFLETFDVSGC 708

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
             L+  PE + +M+ L ++    T + +LPSS E        + E   +LD         
Sbjct: 709 SKLKMIPEFVGQMKRLSKLRLGGTAVEKLPSSIER-------WSESLVELD--------- 752

Query: 610 EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR----------TFLLGLSA 659
                   +   I + P S  L   L +        L  FPR            L   S+
Sbjct: 753 -------LSGIVIREQPYSRFLKQNLIA------SSLGLFPRKSPHPLIPLLASLKHFSS 799

Query: 660 MGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNML 717
           +  L ++D  + E  IP +I  LSSL  L L GNNF SLPA I  +S+L +I++E+   L
Sbjct: 800 LTELKLNDCNLFEGDIPNDIGSLSSLRSLGLRGNNFVSLPASIHLLSKLEYINVENCKRL 859

Query: 718 QSLPELPLCLKYLHLIDCKMLQSLPVLP 745
           Q LPEL          +C  LQ  P  P
Sbjct: 860 QQLPELSAIGVLSRTDNCTALQLFPDPP 887



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 171/415 (41%), Gaps = 64/415 (15%)

Query: 551 NLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
           N++H    ++ +  LK I  S    +T  P  F  +  LE L +E C+ L  +  +I  L
Sbjct: 616 NIDHLWNGIKYLGKLKSIDLSYSINLTRTPD-FTGISNLEKLILEGCTNLVKIHPSIALL 674

Query: 610 EYL-YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY 668
           + L  +      +I +LPS V +   L + D S C  L+  P  F+  +  +  L +   
Sbjct: 675 KRLKIWNFRNCKSIKRLPSEVNME-FLETFDVSGCSKLKMIPE-FVGQMKRLSKLRLGGT 732

Query: 669 AVREIPQEIAYLS-SLEILYLSGNNFESLPAIIKQMSQLRFIH-------LEDFNMLQSL 720
           AV ++P  I   S SL  L LSG        +I++    RF+        L  F      
Sbjct: 733 AVEKLPSSIERWSESLVELDLSG-------IVIREQPYSRFLKQNLIASSLGLFPRKSPH 785

Query: 721 PELPL--------CLKYLHLIDCKMLQS-LP--VLPFCLESLDLTGCNMLRSLP---ELP 766
           P +PL         L  L L DC + +  +P  +             N   SLP    L 
Sbjct: 786 PLIPLLASLKHFSSLTELKLNDCNLFEGDIPNDIGSLSSLRSLGLRGNNFVSLPASIHLL 845

Query: 767 LCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHS 826
             L+Y+N+E+C  L+ LPEL     L    NC  LQ  P+                    
Sbjct: 846 SKLEYINVENCKRLQQLPELSAIGVLSRTDNCTALQLFPD-------------------P 886

Query: 827 PDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEK 886
           PDL        +        NCL +    +      ++L+ R + I  L    +M ++ +
Sbjct: 887 PDL-----CRITTNFSLNCVNCLSMVCNQDASYFLYAVLK-RWIEIQVLS-RCDMTVHMQ 939

Query: 887 LSELRGS---LIVLPGSEIPDWFSNQSSGSSICIQLPPHS-SCRNLIGFAFCAVL 937
            +    S    +V+PGSEIP+WF+NQS G S+  + P  + +    IGFA CA++
Sbjct: 940 KTHRHPSEYLKVVIPGSEIPEWFNNQSVGDSVTEKFPSDACNYSKWIGFAVCALI 994


>gi|357486563|ref|XP_003613569.1| Disease resistance-like protein [Medicago truncatula]
 gi|355514904|gb|AES96527.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1082

 Score =  283 bits (723), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 262/768 (34%), Positives = 377/768 (49%), Gaps = 100/768 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S++ V +VGI G+GGIGKTTLA+AI++  + +FE  CF+ DVR NS +  GLEHLQ++
Sbjct: 222 VESNNGVYMVGIHGIGGIGKTTLARAIYNLIADQFECLCFLHDVRENS-SKHGLEHLQER 280

Query: 61  MLSTT--LSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS T  L  KL      IP   K+R+++ K+L++LDDV+E  QL+ ++GE D FG GSR
Sbjct: 281 LLSKTIGLDIKLGHVSEGIP-IIKQRLQQKKVLLILDDVDEQKQLQVMVGEPDWFGPGSR 339

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRDK +L     +  +IY V+GL  EEA E      FK N       +  + VV+Y
Sbjct: 340 VIITTRDKHLLTSHGID--RIYEVDGLNGEEALELLRWKTFKNNKVDSSFEYILKYVVTY 397

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+GS+L  K    W         I    IH I   LK+SF+ L    KS+F
Sbjct: 398 ASGLPLALEVVGSNLFGKNIEEWKSTFDRYEWIPGKRIHKI---LKVSFDSLEEDEKSVF 454

Query: 239 LDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSIS-GNFLNMHDILQEMGRQ 293
           LDIAC F+G D   V  IL       +     +L++KSL+ I+   ++ +H ++++MG++
Sbjct: 455 LDIACCFKGYDLTEVEFILCAHYGKCIKYHIGVLVEKSLIKINQWGYVTLHHLIEDMGKE 514

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IVR+ES K PGKRSRLW  ++I +VL+ N GT  IE ++LD                   
Sbjct: 515 IVRKESPKHPGKRSRLWFHEDIVQVLEENMGTTEIEIVYLDFP----------------- 557

Query: 354 LRLFKFYVP-KFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
             LF+  V  K  E +K+ ++ T   L         G  +LP  LR L W  YP  ++PS
Sbjct: 558 --LFEEVVEWKGDEFKKMINLKT---LIIKNGHFSKGPKHLPNSLRVLEWHRYPSLSIPS 612

Query: 413 NFKPKNLVELNLRCS--KVEQPWEGEKACVPSSI------------------QNFKYLSA 452
           NF  K L    L  S     +     K CV   I                  Q F  +  
Sbjct: 613 NFYQKKLSICKLGESFFTTFELHGSLKVCVNEFISLVLYTKTILTFIIVLILQKFVNMRE 672

Query: 453 LSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIE 512
           L+   C+ L              I+F +C NL+                     + SS+ 
Sbjct: 673 LNLDNCKYLTHIFDVSCLPNLEKISFRHCENLMT--------------------IDSSVG 712

Query: 513 CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR 572
            L  L+++   GC  LK +S    +L SL  L L  C +LE FPEIL +ME++  I  + 
Sbjct: 713 FLNKLKIIRADGC--LKLMSFPPMELTSLQRLELSFCDSLECFPEILGEMENITEIVLEG 770

Query: 573 TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALS 632
           T I EL  SF+NL GL  L +     L  LP NI  +  L YIL     +        L 
Sbjct: 771 TSIEELSYSFQNLTGLRKLQIRRSGVL-RLPSNILMMPKLSYILVEGILL--------LP 821

Query: 633 NMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNN 692
           N   +L SS    +E      +L L    L   SD  ++     +A+ +++  L LS N+
Sbjct: 822 NKNDNLSSSTSSNVE------ILRLPNCNL---SDEFLQ---TSLAWFANVIHLDLSRNS 869

Query: 693 FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           F  LP  IK+   L  ++L D   L+ +  +P  LK L  + C+ L S
Sbjct: 870 FTILPEFIKECHFLITLNLNDCTCLREIRGIPPNLKRLSALQCESLSS 917



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 127/305 (41%), Gaps = 19/305 (6%)

Query: 558 ILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILA 617
           IL+K  +++ +  D             LP LE +    C  L  +  ++G L  L  I A
Sbjct: 663 ILQKFVNMRELNLDNCKYLTHIFDVSCLPNLEKISFRHCENLMTIDSSVGFLNKLKIIRA 722

Query: 618 AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIPQE 676
                      + L+++ R L+ S C  LE FP   +LG +  +  + +   ++ E+   
Sbjct: 723 DGCLKLMSFPPMELTSLQR-LELSFCDSLECFPE--ILGEMENITEIVLEGTSIEELSYS 779

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE-----LPLCLKYLH 731
              L+ L  L +  +    LP+ I  M +L +I +E   +L +  +         ++ L 
Sbjct: 780 FQNLTGLRKLQIRRSGVLRLPSNILMMPKLSYILVEGILLLPNKNDNLSSSTSSNVEILR 839

Query: 732 LIDCKM----LQSLPVLPFCLESLDLTGCNMLRSLPE-LPLC--LQYLNLEDCNMLRSLP 784
           L +C +    LQ+       +  LDL+  N    LPE +  C  L  LNL DC  LR + 
Sbjct: 840 LPNCNLSDEFLQTSLAWFANVIHLDLSR-NSFTILPEFIKECHFLITLNLNDCTCLREIR 898

Query: 785 ELPLCLQLLTVRNCNRLQSLPEILLCLQELD--ASVLEKLSKHSPDLQWAPESLKSAAIC 842
            +P  L+ L+   C  L S    +L  QEL    S    L   SP  +W     + ++I 
Sbjct: 899 GIPPNLKRLSALQCESLSSSCRSMLLNQELHEAGSTDFCLPGTSPIPEWFQHQTRGSSIS 958

Query: 843 FEFTN 847
           F F N
Sbjct: 959 FWFRN 963


>gi|297794603|ref|XP_002865186.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311021|gb|EFH41445.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1216

 Score =  283 bits (723), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 225/736 (30%), Positives = 340/736 (46%), Gaps = 113/736 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSD--VRGNSETAGGLE----HL 57
           S+ V++VGIWG  GIGKTT+A+A+F+Q S  F+ S F+    V  + E   G      ++
Sbjct: 201 SEEVRMVGIWGSSGIGKTTIARALFNQLSRNFQVSKFIDKAFVYKSREIYSGANPDDYNM 260

Query: 58  QKQMLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           +  +  + LSE L +    I H     ER++  K+LI++DD++    L  L+G+   FG 
Sbjct: 261 KLHLQESFLSESLRMEDIKIDHLGVLGERLQHQKVLIIVDDLDGQVILDSLVGQTQWFGS 320

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           GSRI+V T DK  L   R +   IY V      + F+  C  AF++N+ PE        V
Sbjct: 321 GSRIIVVTNDKHFLRAHRIDH--IYEVTFPTEVQGFQMLCQSAFRQNYAPEGFGKLVVDV 378

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL-TPRV 234
             +    PL L VLGS L  + K +W  +L  L    + +I  I   L+IS++ L +   
Sbjct: 379 ARHAGRLPLGLNVLGSYLRGRDKEYWIDMLPRLQNGLDDKIEKI---LRISYDGLVSAED 435

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSE-SDVLDILIDKSLVSISGNFLNMHDILQEMGRQ 293
           ++ F  IAC F   +   + S+L DS+ S  L  L DKSL+ +   ++ MH  LQEMGR+
Sbjct: 436 QATFRHIACLFNHMEVTTIKSLLGDSDVSIALQNLADKSLIHVRQGYVVMHRSLQEMGRK 495

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IVR +   +PGK+  L DP +I  VL+   GT  + GI  + S+I  +++   AFT M N
Sbjct: 496 IVRTQFIDKPGKQEFLVDPNDICYVLREGIGTKKVLGISFNTSEIDELHIHESAFTGMRN 555

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LR        F +I+   +   +E+L      LP   DYLP  L+ L W  YP+  +PSN
Sbjct: 556 LR--------FLDIDSSKNFRKKERL-----HLPESFDYLPPTLKLLCWSKYPMSGMPSN 602

Query: 414 FKPKNLVELNLRCSKVEQPWEG------------------------------EKAC---- 439
           F+P NLV+L +R SK+ + WEG                              E  C    
Sbjct: 603 FRPDNLVKLRMRKSKLHKLWEGVVSFTCLKEMDMLGSKYLKEIPDLSMATNLETLCFRNC 662

Query: 440 -----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
                + SSI+N   L  L    C++L   P+  +      +N   C  L  FP++S  V
Sbjct: 663 ESLVELSSSIRNLNKLLRLDMGMCKTLTILPTGFNLKSLDHLNLGSCSELRTFPELSTNV 722

Query: 495 TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
           + LYL  + IEE PS++  L +L  L +    +       +  ++     + +    L H
Sbjct: 723 SDLYLFGTNIEEFPSNLH-LKNLVSLTI---SKKNNDGKQWEGVKPFTPFMAMLSPTLTH 778

Query: 555 FPEILEKMEHLKRIYSDRTP-ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
                        ++ D  P + ELPSSF+NL  L+ L + +C  L  LP  I  L    
Sbjct: 779 -------------LWLDSIPSLVELPSSFQNLNQLKKLTIRNCRNLKTLPTGINLLS--- 822

Query: 614 YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
                                L  LD + C+ L SFP       + +  L + + A+ E+
Sbjct: 823 ---------------------LDDLDFNGCQQLRSFPEIS----TNILRLELEETAIEEV 857

Query: 674 PQEIAYLSSLEILYLS 689
           P  I   S+L  L + 
Sbjct: 858 PWWIEKFSNLTRLIMG 873



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 30/187 (16%)

Query: 407 LRTLPSNFKPKNLVELNL-RCSKVEQPWEGEKAC------------------------VP 441
           +   PSN   KNLV L + + +   + WEG K                          +P
Sbjct: 732 IEEFPSNLHLKNLVSLTISKKNNDGKQWEGVKPFTPFMAMLSPTLTHLWLDSIPSLVELP 791

Query: 442 SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ 501
           SS QN   L  L+ + C++L++ P+ ++ +    ++F+ C  L  FP+IS  + RL L +
Sbjct: 792 SSFQNLNQLKKLTIRNCRNLKTLPTGINLLSLDDLDFNGCQQLRSFPEISTNILRLELEE 851

Query: 502 SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC-----LNLEHFP 556
           +AIEEVP  IE  ++L  L +  C RLK +S +  KL+ L  +    C     ++L  +P
Sbjct: 852 TAIEEVPWWIEKFSNLTRLIMGDCSRLKCVSLNISKLKHLGEVSFSNCAALTRVDLSGYP 911

Query: 557 EILEKME 563
            ++E ME
Sbjct: 912 SLMEMME 918


>gi|227438223|gb|ACP30601.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1207

 Score =  282 bits (722), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 230/754 (30%), Positives = 346/754 (45%), Gaps = 125/754 (16%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAGG 53
           ++ V++VG+WG  GIGKTT+A+ +F + S  F GS F+               N +    
Sbjct: 205 AEEVRMVGLWGSSGIGKTTIARVLFQRLSQHFRGSIFIDRAFVSKTMEIFKEANPDDYNM 264

Query: 54  LEHLQKQMLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
             HLQ+  LS  L +        I H +   ER++  K+LI +DD ++   L+ L+G+  
Sbjct: 265 KLHLQRNFLSEILGK----GDIKINHLSAVGERLKNQKVLIFIDDFDDQVVLEALVGQTQ 320

Query: 112 QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH 171
            FG GSRIVV T DK+ L         IY V     E A E  C  AF++   PE     
Sbjct: 321 WFGSGSRIVVVTNDKQYLRAHGINH--IYEVYLPTEELAVEMLCRSAFRKKAAPEGFEEL 378

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT 231
              V       PL L VLGSSL  + K +W  +L  L    + +I      L++S++ LT
Sbjct: 379 VAKVTGLAGSLPLGLNVLGSSLRGRDKEYWMDLLPRLQNGLDGKIEKT---LRVSYDGLT 435

Query: 232 PRV-KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDIL 287
               K++F  IAC F+ E   ++  +L DS   V   L+ L DKSL+ +  +++ MH +L
Sbjct: 436 SEEDKALFRHIACLFQWEKVTYLKLLLADSGLSVTVGLENLADKSLIHVREDYVKMHRLL 495

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA 347
           +EMGR IVR E   EP KR  L D ++I  VL  + GT  I GI L++ +I  +N+   A
Sbjct: 496 EEMGRGIVRLE---EPEKREFLVDAQDICDVLSQDTGTHKILGIKLNIDEIDELNVHENA 552

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F  M NLR  + +  K YEI         E+++   + LP   DYLP KL+ L W  YP+
Sbjct: 553 FKGMRNLRFLEIHSKKRYEI-------GNEEVT---IHLPENFDYLPPKLKILDWFGYPM 602

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEG------------------------EKAC---- 439
           R LPS F+P+ LV+L +  SK+E+ WEG                         KA     
Sbjct: 603 RCLPSKFRPEKLVKLKMVNSKLEKLWEGIVSLTCLKEMDMWGSTNLIEMPDLSKATNLET 662

Query: 440 -----------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP 488
                      +PSSI +   L  L  + C+++ + P+ +       +N   C  +  FP
Sbjct: 663 LKLRKCYSLVKLPSSIPHPNKLKKLDLRNCRNVETIPTGISLKSLKDLNTKGCSRMRTFP 722

Query: 489 QISGKVTRLYLGQSAIEEVPSSIE-CLTDLEVLDLRGCKRL-KRISTSFCKLRSLVTLIL 546
           QIS  +  + +  + IEE+ S++  C  +L    +   K+L +R+   +        ++ 
Sbjct: 723 QISSTIEDVDIDATFIEEIRSNLSLCFENLHTFTMHSPKKLWERVQVCY--------IVF 774

Query: 547 LGCLNLE---HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLP 603
           +G         F  +   + HL    SD   + ELPSSF+NL  L  L + +C  L+ LP
Sbjct: 775 IGGKKSSAEYDFVYLSPSLWHLD--LSDNPGLVELPSSFKNLHNLSRLKIRNCVNLETLP 832

Query: 604 D--NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMG 661
              N+GSL                            +D S C  L +FP+      + + 
Sbjct: 833 TGINLGSLS--------------------------RVDLSGCSRLRTFPQIS----TNIQ 862

Query: 662 LLHISDYAVREIPQEIAYLSSLEILYLSG-NNFE 694
            L +S+  + E+P  I   S L  L + G NN E
Sbjct: 863 ELDLSETGIEEVPCWIEKFSRLNSLQMKGCNNLE 896



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 55/103 (53%)

Query: 440 VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
           +PSS +N   LS L  + C +L + P+ ++      ++ S C  L  FPQIS  +  L L
Sbjct: 807 LPSSFKNLHNLSRLKIRNCVNLETLPTGINLGSLSRVDLSGCSRLRTFPQISTNIQELDL 866

Query: 500 GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLV 542
            ++ IEEVP  IE  + L  L ++GC  L+ ++ +    +SL 
Sbjct: 867 SETGIEEVPCWIEKFSRLNSLQMKGCNNLEYVNLNISDCKSLT 909



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 105/460 (22%), Positives = 189/460 (41%), Gaps = 79/460 (17%)

Query: 493  KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
            K+ +L +  S +E++   I  LT L+ +D+ G   L  +     K  +L TL L  C +L
Sbjct: 613  KLVKLKMVNSKLEKLWEGIVSLTCLKEMDMWGSTNLIEMP-DLSKATNLETLKLRKCYSL 671

Query: 553  EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
               P  +     LK++        E   +  +L  L+ L  + CS++   P    ++E  
Sbjct: 672  VKLPSSIPHPNKLKKLDLRNCRNVETIPTGISLKSLKDLNTKGCSRMRTFPQISSTIED- 730

Query: 613  YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
              +   A+ I ++ S+++L       ++ H   + S P+     +    ++ I       
Sbjct: 731  --VDIDATFIEEIRSNLSLC-----FENLHTFTMHS-PKKLWERVQVCYIVFIGGKK-SS 781

Query: 673  IPQEIAYLS-SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
               +  YLS SL  L LS N     P +++  S  + +H                L  L 
Sbjct: 782  AEYDFVYLSPSLWHLDLSDN-----PGLVELPSSFKNLH---------------NLSRLK 821

Query: 732  LIDCKMLQSLP--VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLC 789
            + +C  L++LP  +    L  +DL+GC+ LR+ P++   +Q L+L +      + E+P  
Sbjct: 822  IRNCVNLETLPTGINLGSLSRVDLSGCSRLRTFPQISTNIQELDLSET----GIEEVPCW 877

Query: 790  ------LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICF 843
                  L  L ++ CN L+ +      L   D   L   S ++   + A     S  I  
Sbjct: 878  IEKFSRLNSLQMKGCNNLEYVN-----LNISDCKSLTGASWNNHPRESALSYYHSFDIGI 932

Query: 844  EFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIP 903
            +FT CL L                            + A+ +K +   G  + L G E+P
Sbjct: 933  DFTKCLNL---------------------------VQEALFQKKTYF-GCQLKLSGEEVP 964

Query: 904  DWFSNQSSGSSICIQLP-PHSS-CRNLIGFAFCAVLDSKK 941
             +F+++++G+S  + +P  HSS  +  + F  C V DS K
Sbjct: 965  SYFTHRTTGTSSSLTIPLLHSSLTQPFLRFRACIVFDSDK 1004


>gi|357513207|ref|XP_003626892.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355520914|gb|AET01368.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 908

 Score =  282 bits (722), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 204/589 (34%), Positives = 303/589 (51%), Gaps = 68/589 (11%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           +SD V +VGIWGMGGIGK+T+AK I++   +EFE   F++++R   E   G   LQ+Q+L
Sbjct: 224 NSDGVCLVGIWGMGGIGKSTIAKVIYNNLCYEFEDQSFLANIREVWEKDRGRIDLQEQLL 283

Query: 63  STTL-SEKLEVAGPNIPH-FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           S  L + K++V          KER+   + L+VLDDV+E  Q   L G  +  G GS I+
Sbjct: 284 SDILKTRKIKVHSVEFGKAMIKERLVTKRALVVLDDVSEFDQFNSLCGNRNGIGPGSIII 343

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRD R+L+    +   IY   GL   E+ E F   AF+E    E     SR VV+Y  
Sbjct: 344 ITTRDVRLLDILGVD--FIYEAEGLNSVESLELFSQHAFRETSPIEGFLILSRYVVAYCG 401

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFL 239
           G PL LEVLGS L  +RK  W  VL  L +I   +IH+    LKISF+ L   + K IFL
Sbjct: 402 GLPLALEVLGSYLFKRRKQEWQSVLSKLEKIPNDQIHEK---LKISFDGLRDHMEKDIFL 458

Query: 240 DIACFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSISG-NFLNMHDILQEMGRQIV 295
           D+ CFF G+D+ +V +IL+     +D+ + +LI++SL+ I   N L MHD+L++MGR+IV
Sbjct: 459 DVCCFFIGKDRAYVTNILNGCGLHADIGITVLIERSLIKIEKYNKLGMHDLLRDMGREIV 518

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           R+ S +EP KRSRLW  +++  VL  + GT AIEG+ + L +   +  D   F  M  LR
Sbjct: 519 RESSPEEPEKRSRLWYHEDVVDVLTDHTGTKAIEGLVMKLQRSSRVGFDAIGFEKMKRLR 578

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
           L                      L    VQ+    +   K L +L W  +PL+ +P NF 
Sbjct: 579 L----------------------LQLDHVQVIGDYECFSKHLSWLSWQGFPLKYMPENFY 616

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
            KNLV ++L+ S + Q W+      P  ++  K L                         
Sbjct: 617 QKNLVAMDLKHSNLTQVWKR-----PQMLEGLKIL------------------------- 646

Query: 476 INFSYCVNLIEFPQISG--KVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
            N S+ + L   P  S    +  L +    ++ EV SSI  L  L +++ + C  L+ + 
Sbjct: 647 -NLSHSMYLTSTPDFSKLPNLENLIMKDCQSLFEVHSSIGDLKKLLLINFKDCTSLRNLP 705

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
               +L S+ T IL GC  +E   E + +M+ L  + + +T + ++P S
Sbjct: 706 REIYQLTSVKTFILSGCSKIEKLEEDIVQMKSLTTLIAAKTGVKQVPFS 754



 Score = 46.6 bits (109), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 26/206 (12%)

Query: 448 KYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEV 507
           K+LS LS++G   L+  P N            Y  NL+             L  S + +V
Sbjct: 596 KHLSWLSWQGF-PLKYMPENF-----------YQKNLVAMD----------LKHSNLTQV 633

Query: 508 PSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKR 567
               + L  L++L+L     L   +  F KL +L  LI+  C +L      +  ++ L  
Sbjct: 634 WKRPQMLEGLKILNLSHSMYLTS-TPDFSKLPNLENLIMKDCQSLFEVHSSIGDLKKLLL 692

Query: 568 I-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLP 626
           I + D T +  LP     L  ++   +  CSK++ L ++I  ++ L  ++AA + + Q+P
Sbjct: 693 INFKDCTSLRNLPREIYQLTSVKTFILSGCSKIEKLEEDIVQMKSLTTLIAAKTGVKQVP 752

Query: 627 SSVALSNMLRSLDSSHCKGL--ESFP 650
            S+  S  +  +     +GL  + FP
Sbjct: 753 FSIVKSKNIGYISLCEYEGLSRDVFP 778


>gi|15236505|ref|NP_192585.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5791483|emb|CAB53527.1| putative protein [Arabidopsis thaliana]
 gi|7267486|emb|CAB77970.1| putative protein [Arabidopsis thaliana]
 gi|332657243|gb|AEE82643.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1234

 Score =  282 bits (721), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 236/751 (31%), Positives = 381/751 (50%), Gaps = 63/751 (8%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAGGLEH 56
           V++VGIWG  GIGKTT+A+A+F++    F+G  F+             R NS+      H
Sbjct: 202 VRMVGIWGPTGIGKTTIARALFNRIYRHFQGRVFIDRAFISKSMAIYSRANSDDYNLKLH 261

Query: 57  LQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           LQ+++LS  L          I H    KER+R+MK+LI +DD+++   L+ L  +   FG
Sbjct: 262 LQEKLLSKLLD----KKNLEINHLDAVKERLRQMKVLIFIDDLDDQVVLEALACQTQWFG 317

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSRI+V T+DK +L  +  +   IY V     + A + FC  AF+++  P      +  
Sbjct: 318 HGSRIIVITKDKHLLRAYGIDH--IYEVLLPSKDLAIKMFCRSAFRKDSPPNGFIELAYD 375

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV      PL L +LGS L  + K  W  ++  L    + +I      L++S++ L    
Sbjct: 376 VVKRAGSLPLGLNILGSYLRGRSKEDWIDMMPGLRNKLDGKIQKT---LRVSYDGLASED 432

Query: 235 -KSIFLDIACFFEGEDKDFVASILDDSESDVLDILI---DKSLVSI--SGNFLNMHDILQ 288
            ++IF  IAC F  E    +  +L+DS  +V + LI   DKSL+ I      + MH +LQ
Sbjct: 433 DQAIFRHIACIFNFEACSDIKKLLEDSGLNVTNGLINLVDKSLIRIEPKQKTVEMHCLLQ 492

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
           E  R+I+R +S  +PGKR  L D K+I+ VL +  GT  + GI LD+ +I+ ++L   AF
Sbjct: 493 ETAREIIRAQSFDDPGKREFLVDGKDIADVLDNCSGTRKVLGISLDMDEIEELHLQVDAF 552

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M NLR  K Y           ++S +E     K+ LP   +YLP  LR L W  +P+R
Sbjct: 553 KKMLNLRFLKLYTN--------TNISEKE----DKLLLPKEFNYLPNTLRLLSWQRFPMR 600

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            +PS+F PK LV+L +  SK+E+ W+G        +   + L  ++  G ++L+ FP NL
Sbjct: 601 CMPSDFFPKYLVKLLMPGSKLEKLWDG--------VMPLQCLKNMNLFGSENLKEFP-NL 651

Query: 469 HFVCPV-TINFSYCVNLIEFPQISGKVTRL-YLGQSA---IEEVPSSIECLTDLEVLDLR 523
                + T++  +C++L+E P   G + +L YL  S    +E+ P+ +  L  L  L L 
Sbjct: 652 SLATNLETLSLGFCLSLVEVPSTIGNLNKLTYLNMSGCHNLEKFPADVN-LKSLSDLVLN 710

Query: 524 GCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE 583
           GC RLK     F  + S ++ + L  L +E FP  L  +E+L  +        +L    +
Sbjct: 711 GCSRLK----IFPAISSNISELCLNSLAVEEFPSNLH-LENLVYLLIWGMTSVKLWDGVK 765

Query: 584 NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
            L  L+ + + D   L  +PD   +   L   L    +I +LPSS+   + L  LD S C
Sbjct: 766 VLTSLKTMHLRDSKNLKEIPDLSMASNLLILNLEQCISIVELPSSIRNLHNLIELDMSGC 825

Query: 644 KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
             LE+FP    + L ++  ++++  +  +I  +I+  +++  L LS    E +P  I+  
Sbjct: 826 TNLETFPTG--INLQSLKRINLARCSRLKIFPDIS--TNISELDLSQTAIEEVPLWIENF 881

Query: 704 SQLRFIHLEDFNMLQSLPELPLCLKYLHLID 734
           S+L+++ +   NML+ +      LK+L  +D
Sbjct: 882 SKLKYLIMGKCNMLEYVFLNISKLKHLKSVD 912



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 17/191 (8%)

Query: 367 IEKLPSMSTEEQLSY------SKVQLPNGLDYLPKKLRYLHW-DTYPLRTLPSNFKPKNL 419
           +E+ PS    E L Y      + V+L +G+  L   L+ +H  D+  L+ +P      NL
Sbjct: 735 VEEFPSNLHLENLVYLLIWGMTSVKLWDGVKVLTS-LKTMHLRDSKNLKEIPDLSMASNL 793

Query: 420 VELNL-RCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
           + LNL +C  + +        +PSSI+N   L  L   GC +L +FP+ ++      IN 
Sbjct: 794 LILNLEQCISIVE--------LPSSIRNLHNLIELDMSGCTNLETFPTGINLQSLKRINL 845

Query: 479 SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
           + C  L  FP IS  ++ L L Q+AIEEVP  IE  + L+ L +  C  L+ +  +  KL
Sbjct: 846 ARCSRLKIFPDISTNISELDLSQTAIEEVPLWIENFSKLKYLIMGKCNMLEYVFLNISKL 905

Query: 539 RSLVTLILLGC 549
           + L ++    C
Sbjct: 906 KHLKSVDFSDC 916



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 134/546 (24%), Positives = 219/546 (40%), Gaps = 107/546 (19%)

Query: 547  LGCLNLEHFPEILEKM----EHLKRIYSDRTPI----------TELPSSFENL---PGLE 589
            + C+  + FP+ L K+      L++++    P+          +E    F NL     LE
Sbjct: 599  MRCMPSDFFPKYLVKLLMPGSKLEKLWDGVMPLQCLKNMNLFGSENLKEFPNLSLATNLE 658

Query: 590  VLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
             L +  C  L  +P  IG+L  L Y+ ++    + + P+ V L + L  L  + C  L+ 
Sbjct: 659  TLSLGFCLSLVEVPSTIGNLNKLTYLNMSGCHNLEKFPADVNLKS-LSDLVLNGCSRLKI 717

Query: 649  FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
            FP       S +  L ++  AV E P  + +L +L  L + G     L   +K ++ L+ 
Sbjct: 718  FPAIS----SNISELCLNSLAVEEFPSNL-HLENLVYLLIWGMTSVKLWDGVKVLTSLKT 772

Query: 709  IHLEDFNMLQSLPELPLC--LKYLHLIDCKMLQSLPVLPFCLESL---DLTGCNMLRSLP 763
            +HL D   L+ +P+L +   L  L+L  C  +  LP     L +L   D++GC  L + P
Sbjct: 773  MHLRDSKNLKEIPDLSMASNLLILNLEQCISIVELPSSIRNLHNLIELDMSGCTNLETFP 832

Query: 764  E-LPL-CLQYLNLEDCNMLRSLP-----------------ELPLC------LQLLTVRNC 798
              + L  L+ +NL  C+ L+  P                 E+PL       L+ L +  C
Sbjct: 833  TGINLQSLKRINLARCSRLKIFPDISTNISELDLSQTAIEEVPLWIENFSKLKYLIMGKC 892

Query: 799  NRLQSLPEILLCLQEL------DASVLEKLSKHSPDLQWAPESLKSAAI-CFE-----FT 846
            N L+ +   +  L+ L      D  +L K   +   LQ   E+  S  I C +     F 
Sbjct: 893  NMLEYVFLNISKLKHLKSVDFSDCGILSKADMYM--LQVPNEASSSLPINCVQKAELIFI 950

Query: 847  NCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWF 906
            NC KLN KA        L+R +                          ++LPG E+P +F
Sbjct: 951  NCYKLNQKA--------LIRQQFFL---------------------KKMILPGEEVPFYF 981

Query: 907  SNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSET 966
            ++Q+ GSSI I L      +    F  C V+D K V     R ++V+ Q     K +   
Sbjct: 982  THQTIGSSIGIPLLHILLSQQYFRFKACVVVDPKFVFPA--RRYHVNIQVSCRFKGIY-G 1038

Query: 967  KHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDG------YHHTIATFKFFAERKFYK 1020
             + D   +  +      +D  +  F  C  +   +       Y H    F        +K
Sbjct: 1039 NYFDYA-DQPHCFSPSQTDNYVYVFDCCFPLNKDNAPLAELDYDHVDIEFHLDDNYNHHK 1097

Query: 1021 IKRCGL 1026
            IK CG+
Sbjct: 1098 IKGCGI 1103


>gi|295083309|gb|ADF78108.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  282 bits (721), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 254/796 (31%), Positives = 370/796 (46%), Gaps = 120/796 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V ++GI G+GGIGK+TLA A+++  +  F+GSCF+ D+R  S    GL+HLQ  
Sbjct: 205 VESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREKS-NKKGLQHLQSI 263

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +L   L EK      +E     I H    R++R K+L++LDDV++  QL+ ++G    FG
Sbjct: 264 LLREILGEKEINLASVEQGASIIQH----RLQRKKVLLILDDVDKHEQLQAIVGRPCWFG 319

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK++L       K+ Y V  L    A +     +FK              
Sbjct: 320 PGSRVIITTRDKQLLASHGV--KRTYEVELLNENNALQLLTWKSFKTEKVDPSYKEVLND 377

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV Y  G PL LEV+GS+L  K    W   +    RI   +I    +ILK+SF+ L    
Sbjct: 378 VVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQI---LEILKVSFDALEEEQ 434

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNF------LNMH 284
           K++FLDIAC F   D   V  IL     D +     +L++KSL+    ++      + MH
Sbjct: 435 KNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIVTMH 494

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG---- 340
           D++++MG++IVRQES KEP KRSRLW P++I  VL+ N+GT  IE I LD          
Sbjct: 495 DLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKEEIV 554

Query: 341 INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYL 400
           + L+ +AF  M NL+       KF                        G  YLP  LR L
Sbjct: 555 VELNTKAFKKMKNLKTLIIRNGKF----------------------SKGPKYLPNNLRVL 592

Query: 401 HWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPS-----SIQNFKYLSALSF 455
            W  YP   LPS+F PK L    L  S           C+ S       + F  L  L+F
Sbjct: 593 EWWRYPSHCLPSDFHPKKLAICKLPFS-----------CISSFELDGVWKMFVNLRILNF 641

Query: 456 KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT 515
             C+ L   P           +F  C NLI                     V +SI  L 
Sbjct: 642 DRCEGLTQIPDVSGLPNLEEFSFECCFNLI--------------------TVHNSIGFLD 681

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
            L++L+   CKRL+       KL SL  L L  C +LE FP+IL KME++++++   + I
Sbjct: 682 KLKILNAFRCKRLRSFPP--IKLTSLEKLNLSCCYSLESFPKILGKMENIRQLWLSESSI 739

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
           TELP SF+NL GL                    LE L+    +   I ++PSS+ L   L
Sbjct: 740 TELPFSFQNLAGLR------------------GLELLFL---SPHTIFKVPSSIVLMPEL 778

Query: 636 RSLDSSHCKGLESFPR--------TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
             + +   KG +   +        + +     M  + I + +      +  + + ++ L 
Sbjct: 779 TVIRALGLKGWQWLKQEEGEEKTGSIVSSKVEMLTVAICNLSDEFFSIDFTWFAHMKELC 838

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC 747
           LS NNF  L   IK+   LR + + D   L+ +  +P  LK+   I+CK L S  +  F 
Sbjct: 839 LSENNFTILRECIKECQFLRKLDVCDCKHLREIRGIPPNLKHFFAINCKSLTSSSIRKFL 898

Query: 748 LESLDLTGCNMLRSLP 763
            + L   G N +  LP
Sbjct: 899 NQELHEAG-NTVFCLP 913



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 141/347 (40%), Gaps = 69/347 (19%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +T++P     LP LE    E C  L  + ++IG L+ L  + A      +    + L++ 
Sbjct: 647 LTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPIKLTS- 704

Query: 635 LRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIP---QEIAYLSSLEILYLSG 690
           L  L+ S C  LESFP+  +LG +  +  L +S+ ++ E+P   Q +A L  LE+L+LS 
Sbjct: 705 LEKLNLSCCYSLESFPK--ILGKMENIRQLWLSESSITELPFSFQNLAGLRGLELLFLSP 762

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLES 750
           +    +P+ I  M +L  I        Q L +     K   ++  K+           E 
Sbjct: 763 HTIFKVPSSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSKV-----------EM 811

Query: 751 LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTV-RNC-NRLQSLPEIL 808
           L +  CN         L  ++ ++ D      + EL L     T+ R C    Q L ++ 
Sbjct: 812 LTVAICN---------LSDEFFSI-DFTWFAHMKELCLSENNFTILRECIKECQFLRKLD 861

Query: 809 LCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIR 868
           +C             KH  +++  P +LK     F   NC  L   +  K L        
Sbjct: 862 VCD-----------CKHLREIRGIPPNLKH----FFAINCKSLTSSSIRKFL-------- 898

Query: 869 HMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSI 915
                          N++L E   ++  LPG  IP+WF  QS G SI
Sbjct: 899 ---------------NQELHEAGNTVFCLPGKRIPEWFDQQSRGPSI 930


>gi|356561225|ref|XP_003548883.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1052

 Score =  282 bits (721), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 242/759 (31%), Positives = 359/759 (47%), Gaps = 97/759 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V +VGI G+GG+GKTTLA A+++  +  FE S F+ +VR  S    GL+HLQ  
Sbjct: 204 VGSDDVVHMVGIHGLGGVGKTTLAVAVYNSIARHFEASYFLENVRETS-NKKGLQHLQSI 262

Query: 61  MLSTTLSEKLEVAGPNI---PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +LS  + +K ++   N     H  K ++++ K+L++LDDVNE  QL+ +IG  D FG+GS
Sbjct: 263 LLSKIVRDK-KIKLTNWREGTHIIKHKLKQKKVLLILDDVNEHIQLQAIIGSPDWFGRGS 321

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS--RSV 175
           R+++TTRD+ +L       KK Y +  L  + A +     AF E     D ++H      
Sbjct: 322 RVIITTRDEHLLALHNV--KKTYMLRELNKKYALQLLIQKAF-ELEKEVDPSYHDILNRA 378

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           V+Y  G PL LEV+GS+L  K    W   L+   RI +     IY ILK+S++ L    K
Sbjct: 379 VTYASGLPLALEVIGSNLFGKSIEEWESALNGYERIPDK---SIYMILKVSYDALNEDEK 435

Query: 236 SIFLDIACFFE----GEDKDFVASILDDSESDVLDILIDKSLVSI-----SGNFLNMHDI 286
           +IFLDIAC F+    GE +D + +         + +L+ KSL++I         + +HD+
Sbjct: 436 NIFLDIACCFKEYKLGELQDILYAHYGRCMKYHIGVLVKKSLINIHECSWDSKVMRLHDL 495

Query: 287 LQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDP 345
           +++MG++IVR+ES  EPGKRSRLW  ++I+ VL+ NKGT  IE I ++ S   + +  D 
Sbjct: 496 IEDMGKEIVRRESPTEPGKRSRLWSHEDINLVLQENKGTSKIEIICMNFSSFGEEVEWDG 555

Query: 346 RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
            AF  M NL+        F                        G  +LP  LR L W   
Sbjct: 556 NAFKKMKNLKTLIIQSDCF----------------------SKGPRHLPNTLRVLEWWRC 593

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
           P +  P NF PK L    L  S             P   +    L+ L+   C SL   P
Sbjct: 594 PSQEWPRNFNPKQLAICKLPHSSFTSL-----GLAPLFNKRLVNLTRLTLDECDSLTEIP 648

Query: 466 SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
                     ++F+ C NL                      +  S+  L  L+ L+  GC
Sbjct: 649 DVSGLSNLENLSFASCWNLF--------------------TIHHSVGLLEKLKTLNAEGC 688

Query: 526 KRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL 585
             LK  S    KL SL    L  C +LE FPEIL KME++ ++      IT+LP SF NL
Sbjct: 689 PELK--SFPPLKLTSLEMFQLSYCSSLESFPEILGKMENITQLSWTDCAITKLPPSFRNL 746

Query: 586 PGLEVLFVEDCSKLD----NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
             L++L VE+ ++ D     L  NI  +  L  I A       L   + L ++L+ L S 
Sbjct: 747 TRLQLLVVENLTEFDFDAATLISNICMMPELNQIDAVG-----LQWRLLLDDVLK-LTSV 800

Query: 642 HCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIK 701
            C  ++S              L +SD  ++     ++   +++ L LS + F  +P  IK
Sbjct: 801 VCSSVQSLT------------LELSDELLQLF---LSCFVNVKKLNLSWSKFTVIPECIK 845

Query: 702 QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           +   L  + L   N L+ +  +P  LK    ID   L S
Sbjct: 846 ECRFLTTLTLNYCNCLREIRGIPPNLKTFSAIDSPALNS 884



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 179/422 (42%), Gaps = 89/422 (21%)

Query: 532 STSFCKLRSLVTLILLG-CLNL--EHFPEILEKMEHLKRIYSDRTP---------ITELP 579
             +F K+++L TLI+   C +    H P  L  +E   R  S   P         I +LP
Sbjct: 555 GNAFKKMKNLKTLIIQSDCFSKGPRHLPNTLRVLEWW-RCPSQEWPRNFNPKQLAICKLP 613

Query: 580 -SSFENLPGLEVLF-----------VEDCSKLDNLPDNIG--SLEYLYYILAAASAISQL 625
            SSF +L GL  LF           +++C  L  +PD  G  +LE L +  A+   +  +
Sbjct: 614 HSSFTSL-GLAPLFNKRLVNLTRLTLDECDSLTEIPDVSGLSNLENLSF--ASCWNLFTI 670

Query: 626 PSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEI 685
             SV L   L++L++  C  L+SFP    L L+++ +  +S            Y SSLE 
Sbjct: 671 HHSVGLLEKLKTLNAEGCPELKSFPP---LKLTSLEMFQLS------------YCSSLE- 714

Query: 686 LYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP 745
                    S P I+ +M  +  +   D     ++ +LP   + L  +   ++++L    
Sbjct: 715 ---------SFPEILGKMENITQLSWTDC----AITKLPPSFRNLTRLQLLVVENLTEFD 761

Query: 746 FCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLP 805
           F   +L    C M    PEL       N  D   L+    L   L+L +V  C+ +QSL 
Sbjct: 762 FDAATLISNICMM----PEL-------NQIDAVGLQWRLLLDDVLKLTSVV-CSSVQSLT 809

Query: 806 -EILLCLQELDASVLEKLSKHSPDLQWA-----PESLKS----AAICFEFTNCLK-LNGK 854
            E+   L +L  S    + K   +L W+     PE +K       +   + NCL+ + G 
Sbjct: 810 LELSDELLQLFLSCFVNVKK--LNLSWSKFTVIPECIKECRFLTTLTLNYCNCLREIRGI 867

Query: 855 ANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSS 914
             N     +   I   A+ S  +   M +N++L E R +   LP  +IP+WF  QS G  
Sbjct: 868 PPN---LKTFSAIDSPALNSSSIS--MLLNQELHEARDTDFSLPRVKIPEWFECQSRGPP 922

Query: 915 IC 916
           IC
Sbjct: 923 IC 924


>gi|297811235|ref|XP_002873501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319338|gb|EFH49760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 989

 Score =  282 bits (721), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 235/750 (31%), Positives = 364/750 (48%), Gaps = 95/750 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN-----SETAGGLEHLQ 58
           SD V+++GIWG  GIGKTT+A+ +++QFS+ F+   F+ +++ N     S+       LQ
Sbjct: 172 SDEVRMIGIWGPPGIGKTTIARVVYNQFSNSFQLGVFLDNIKANYTRPCSDDYSSKLQLQ 231

Query: 59  KQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           K  +S  ++ K +E+    +    ++R++  K+L+VLD VN+  QL  ++ E   FG GS
Sbjct: 232 KHFMSQIINHKDMEIFHLGV---AQDRLKDKKVLVVLDGVNQSVQLDAMVKETWWFGPGS 288

Query: 118 RIVVTTRDKRVLEKFRGEE-KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           RI++TT+D R+   FR      IY+V+    +EA + FC +AF +    +     +  V 
Sbjct: 289 RIIITTQDHRL---FRAHGINHIYQVDFPPADEALQIFCMYAFGQKSPKDGFEELAWEVT 345

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           ++    PL L VLGS      K  W K    L R+  S   DI  ILK S++ L    K 
Sbjct: 346 TFAGKLPLGLRVLGSHFRGMSKQEWIK---SLPRLKTSLDTDIQSILKFSYDALDDEDKD 402

Query: 237 IFLDIACFF-----EGEDKDFVASILDDSESDVLDILIDKSLVSISG-NFLNMHDILQEM 290
           +FL IACFF     E  ++      L+  +   L++L  KSL+  +    + MH +L+++
Sbjct: 403 LFLHIACFFNYGVIEKVEEHLARKFLEVRQR--LNVLSQKSLILFNQCGRIEMHSLLEKL 460

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNK-GTDAIEGIFLDLSKI-KGINLDPRAF 348
           GR+IVR+ S  +PG+R  L D +EI  VL  +  G+ +I GI L+   I + +N+  RAF
Sbjct: 461 GREIVRKLSIHDPGQRQFLVDEREICEVLISDAAGSKSIIGIDLNYRGIGEELNISERAF 520

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M NL+  +                       + +QL  GL+Y  +KLR LHW  +P+ 
Sbjct: 521 EGMCNLQFLRI------------------DGDCNTLQLSQGLNYFSRKLRILHWSYFPMA 562

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            LPSN   + LVEL +  SK+E+ WEG        I+  + L  +  +   +L+  P   
Sbjct: 563 CLPSNVNLEFLVELIMDNSKLEKLWEG--------IKPLRNLKRMDMRDSANLKELPDFS 614

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVT---RLYLGQ-SAIEEVPSSIECLTDLEVLDLRG 524
                  +N SYC +LI+ P   G  T   +L L + S I E PS IE  T+LE+LDL  
Sbjct: 615 TATNLQKLNLSYCSSLIKLPSSIGNATNLKKLNLRRCSNIMEFPSFIEKATNLEILDLSS 674

Query: 525 CKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
           C  L  +      L+ L  L L GC  L+  P  +                        N
Sbjct: 675 CSNLVELPLFIKNLQKLQKLRLGGCSKLQVLPTNI------------------------N 710

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
           L  L  L + DCS L   P+   ++  L     + +AI ++P S+A    L  L  S+ +
Sbjct: 711 LESLVELDLTDCSALKLFPEISTNVRVLKL---SETAIEEVPPSIAFWPRLDELHMSYFE 767

Query: 645 GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQM 703
            L+  P      L ++  L++SD  ++E+P  +  +S L+ L L G    ESLP I + +
Sbjct: 768 NLKELPH----ALCSITDLYLSDTEIQEVPSLVKRISRLDRLVLKGCRKLESLPQIPESL 823

Query: 704 SQLRFIHLEDFNMLQ----SLPELPLCLKY 729
           S    I  ED   L+    S     +CLK+
Sbjct: 824 S---IIDAEDCESLERLDCSFHNPKICLKF 850


>gi|15237438|ref|NP_199457.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177582|dbj|BAB10813.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008004|gb|AED95387.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1123

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 239/803 (29%), Positives = 368/803 (45%), Gaps = 154/803 (19%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAGG 53
           SD V++VGIWG  GIGKTT+A+A+F   S +F+ S ++             R N +    
Sbjct: 204 SDEVRMVGIWGTSGIGKTTIARALFSNLSSQFQSSVYIDRAFISKSMEGYGRANPDDYNM 263

Query: 54  LEHLQKQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF 113
              L++  L   L +K    G       +ER++  K+LI++DD+++   L  L+G    F
Sbjct: 264 KLRLRENFLFEILGKKNMKIGA-----MEERLKHQKVLIIIDDLDDQDVLDALVGRTQWF 318

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSR 173
           G GSRI+V T++K  L     +   +Y       E A E FC +AF++N  P+     S 
Sbjct: 319 GSGSRIIVVTKNKHFLRAHGIDH--VYEACLPSEELALEMFCRYAFRKNSPPDGFMELSS 376

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-P 232
            V       PL L+VLGS L  +    W  ++  L    + +I      L++S++ L   
Sbjct: 377 EVALRAGNLPLGLKVLGSYLRGRDIEDWMDMMPRLQNDLDGKIEKT---LRVSYDGLNNK 433

Query: 233 RVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQE 289
           + ++IF  IAC F GE  + +  +L +S+ DV   L  L+DKSL+ +  + + MH +LQ+
Sbjct: 434 KDEAIFRHIACLFNGEKVNDIKLLLAESDLDVNIGLKNLVDKSLIFVREDTIEMHRLLQD 493

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFT 349
           MG++IVR +S  EPG+R  L D K I  VL+ N GT  + GI LD+++  G+ +   AF 
Sbjct: 494 MGKEIVRAQS-NEPGEREFLVDSKHIYDVLEDNTGTKKVLGIALDINETDGLYIHESAFK 552

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
            M NL    FY  +  ++                  L  G D+LP KLR L W+ YPLR 
Sbjct: 553 GMRNLLFLNFYTKQKKDV---------------TWHLSEGFDHLPPKLRLLSWEKYPLRC 597

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEKAC------------------------------ 439
           +PSNF+P+NLV+L +  SK+E+ W+G  +                               
Sbjct: 598 MPSNFRPENLVKLQMCESKLEKLWDGVHSLTGLRNMDLRGSENLKEIPDLSLATNLKKLD 657

Query: 440 ---------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
                    + S+IQN   L  L  + C++L + P  ++      +N + C  L  FP I
Sbjct: 658 VSNCTSLVELSSTIQNLNQLEELQMERCENLENLPIGINLESLYCLNLNGCSKLRSFPDI 717

Query: 491 SGKVTRLYLGQSAIEEVPSS--IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG 548
           S  ++ LYL ++AIEE P+   +E L  L + D++  K  KR+      L  L+T++   
Sbjct: 718 STTISELYLSETAIEEFPTELHLENLYYLGLYDMKSEKLWKRVQ----PLTPLMTML--- 770

Query: 549 CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGS 608
                  P +       K   SD   + ELPSSF+NL  LE L +  C+ L+ LP  + +
Sbjct: 771 ------SPSL------TKLFLSDIPSLVELPSSFQNLHNLEHLNIARCTNLETLPTGV-N 817

Query: 609 LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP----RTFLLGLSAMGLLH 664
           LE                       +L  LD S C  L SFP      F L L   G   
Sbjct: 818 LE-----------------------LLEQLDFSGCSRLRSFPDISTNIFSLVLDGTG--- 851

Query: 665 ISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNML-----Q 718
                + E+P  I     L  L + G NN + +   I ++ +L  +   D   L      
Sbjct: 852 -----IEEVPWWIEDFYRLSFLSMIGCNNLQGVSLNISKLEKLETVDFSDCEALSHANWD 906

Query: 719 SLP------------ELPLCLKY 729
           ++P            +LP+C+K+
Sbjct: 907 TIPSAVAMATENIHSKLPVCIKF 929



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 208/480 (43%), Gaps = 117/480 (24%)

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           + +L + +S +E++   +  LT L  +DLRG + LK I        SL T          
Sbjct: 607 LVKLQMCESKLEKLWDGVHSLTGLRNMDLRGSENLKEIPD-----LSLAT---------- 651

Query: 554 HFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
                     +LK++  S+ T + EL S+ +NL  LE L +E C  L+NLP  I +LE L
Sbjct: 652 ----------NLKKLDVSNCTSLVELSSTIQNLNQLEELQMERCENLENLPIGI-NLESL 700

Query: 613 YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
           Y                        L+ + C  L SFP       + +  L++S+ A+ E
Sbjct: 701 Y-----------------------CLNLNGCSKLRSFPDIS----TTISELYLSETAIEE 733

Query: 673 IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNML-----QSLPELPLCL 727
            P E+ +L +L  L L     E L   ++ ++ L  +       L      SL ELP   
Sbjct: 734 FPTEL-HLENLYYLGLYDMKSEKLWKRVQPLTPLMTMLSPSLTKLFLSDIPSLVELPSSF 792

Query: 728 KYLHLID------CKMLQSLP--VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM 779
           + LH ++      C  L++LP  V    LE LD +GC+ LRS P++   +  L L+    
Sbjct: 793 QNLHNLEHLNIARCTNLETLPTGVNLELLEQLDFSGCSRLRSFPDISTNIFSLVLDGT-- 850

Query: 780 LRSLPELPLC------LQLLTVRNCNRLQSLP---EILLCLQELDASVLEKLSKHSPD-- 828
              + E+P        L  L++  CN LQ +      L  L+ +D S  E LS  + D  
Sbjct: 851 --GIEEVPWWIEDFYRLSFLSMIGCNNLQGVSLNISKLEKLETVDFSDCEALSHANWDTI 908

Query: 829 ---LQWAPESLKSA-AICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAIN 884
              +  A E++ S   +C +F+NC  L+ KA   +L  S+ +                  
Sbjct: 909 PSAVAMATENIHSKLPVCIKFSNCFNLDHKA--VLLQQSIFK------------------ 948

Query: 885 EKLSELRGSLIVLPGSEIPDWFSNQSSGSSIC-IQLPPHSSCRNLIGFAFCAVLDSKKVD 943
                     ++L G E+  +F+++++G+S+  I L   S C+    F  CA++D++ +D
Sbjct: 949 ---------QLILSGGEMFSYFTHRTTGTSLTNIPLLHISPCQPFFRFRACALVDTESMD 999


>gi|356558199|ref|XP_003547395.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1062

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 215/653 (32%), Positives = 314/653 (48%), Gaps = 84/653 (12%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE 68
           ++GIWGM G GKTTLA+ +F +   E++G  F+ + R  S +  G++ L+K++ S  L  
Sbjct: 266 LIGIWGMAGNGKTTLAEEVFKKLQSEYDGCYFLPNEREQS-SRHGIDSLKKEIFSGLLEN 324

Query: 69  KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRV 128
            + +  PN+      R+ RMK+LIVLDDVN+   L++L+G  D FG GSRI++TTR  +V
Sbjct: 325 VVTIDNPNVSLDIDRRIGRMKVLIVLDDVNDPDHLEKLLGTPDNFGSGSRIIITTRYVQV 384

Query: 129 LEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEV 188
           L   +  E  IY++     ++A E F   AFK++    + N  S+ VV Y KGNPLVL+V
Sbjct: 385 LNANKANE--IYQLGEFSLDKALELFNLIAFKQSDHQWEYNELSKKVVDYAKGNPLVLKV 442

Query: 189 LGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF--- 245
           L   LC K K  W  +L  L R+  +   D Y ++K+S+++L  + + IFLD+ACFF   
Sbjct: 443 LAQLLCGKNKEEWEGMLDTLKRMPPA---DAYKVMKLSYDELDRKEQQIFLDLACFFLRT 499

Query: 246 -EGEDKDFVASILDDSESD-----VLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQE 298
               +   + S+L  +ES       L  L DK+L++ S  N + MHD LQEM  +IVR+E
Sbjct: 500 HTTVNVSNLKSLLKGNESQETVTFRLGRLKDKALITYSDDNVIAMHDSLQEMALEIVRRE 559

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
           S ++PG RSRLWDP +I   LK+ K T AI  I + L       LDP  F  M+ L    
Sbjct: 560 SSEDPGSRSRLWDPNDIFEALKNVKSTKAIRSILIHLPTFMKQELDPHIFGKMNRL---- 615

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
               +F EI    S   E+ +      L   L +   +LR+L W  YPL++LP +F  + 
Sbjct: 616 ----QFLEI----SGKCEKDIFDEHNILAKWLQFSANELRFLCWYRYPLKSLPEDFSAEK 667

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
           LV L L   +++  W G        ++N   L  L     + L   P           + 
Sbjct: 668 LVILKLPKGEIKYLWHG--------VKNLMNLKELHLTDSKMLEELP-----------DL 708

Query: 479 SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
           S   NL            +  G S +  V  SI  L  LE L+L+ C       TS   L
Sbjct: 709 SNATNL---------EVLVLQGCSMLTRVHPSIFSLGKLEKLNLQDC-------TSLTTL 752

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
            S   L  L  LN       L+K E L+++      I EL   +  +      F      
Sbjct: 753 ASNSHLCSLSYLN-------LDKCEKLRKLSLIAENIKELRLRWTKVKAFSFTF------ 799

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
                   G    L  +L   S I +LPS +     L  L+ S+C  L+  P+
Sbjct: 800 --------GHESKLQLLLLEGSVIKKLPSYIKDLMQLSHLNVSYCSNLQEIPK 844



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 129/312 (41%), Gaps = 61/312 (19%)

Query: 663 LHISDYAVREIPQEIAYLSSLEILYLSGNNFESL--PAIIKQMSQLRFIHLEDFNMLQSL 720
           LH++D  + E   +++  ++LE+L L G +  +   P+I   + +L  ++L+D   L +L
Sbjct: 694 LHLTDSKMLEELPDLSNATNLEVLVLQGCSMLTRVHPSIF-SLGKLEKLNLQDCTSLTTL 752

Query: 721 PELP-LC-LKYLHLIDCKMLQSLPVLPFCLESLDLTGC---------------------- 756
                LC L YL+L  C+ L+ L ++   ++ L L                         
Sbjct: 753 ASNSHLCSLSYLNLDKCEKLRKLSLIAENIKELRLRWTKVKAFSFTFGHESKLQLLLLEG 812

Query: 757 NMLRSLPELP---LCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQE 813
           ++++ LP      + L +LN+  C+ L+ +P+LP  L++L  R      SL  ++     
Sbjct: 813 SVIKKLPSYIKDLMQLSHLNVSYCSNLQEIPKLPPSLKILDARYSQDCTSLKTVVF---- 868

Query: 814 LDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIA 873
                        P    A E LK       F NCLKLN ++   I  ++ + +   A  
Sbjct: 869 -------------PST--ATEQLKEYRKEVLFWNCLKLNQQSLEAIALNAQINVMKFANR 913

Query: 874 SLRLGYEMAIN-----EKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL---PPHSSC 925
            L +     +      +K       + V PGS + +W   ++  + I I +   PP    
Sbjct: 914 RLSVSNHDDVENYNDYDKKYHFYQVVYVYPGSSVLEWLEYKTRNNYIIIDMSSAPPSLP- 972

Query: 926 RNLIGFAFCAVL 937
              +GF FC  L
Sbjct: 973 ---VGFIFCFAL 981



 Score = 47.0 bits (110), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 12/192 (6%)

Query: 559 LEKMEHLKRIY-SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-L 616
           ++ + +LK ++ +D   + ELP    N   LEVL ++ CS L  +  +I SL  L  + L
Sbjct: 685 VKNLMNLKELHLTDSKMLEELPD-LSNATNLEVLVLQGCSMLTRVHPSIFSLGKLEKLNL 743

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE 676
              ++++ L S+  L + L  L+   C+ L    R   L    +  L +    V+     
Sbjct: 744 QDCTSLTTLASNSHLCS-LSYLNLDKCEKL----RKLSLIAENIKELRLRWTKVKAFSFT 798

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL---HLI 733
             + S L++L L G+  + LP+ IK + QL  +++   + LQ +P+LP  LK L   +  
Sbjct: 799 FGHESKLQLLLLEGSVIKKLPSYIKDLMQLSHLNVSYCSNLQEIPKLPPSLKILDARYSQ 858

Query: 734 DCKMLQSLPVLP 745
           DC  L+++ V P
Sbjct: 859 DCTSLKTV-VFP 869


>gi|297805564|ref|XP_002870666.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316502|gb|EFH46925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1104

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 229/670 (34%), Positives = 339/670 (50%), Gaps = 90/670 (13%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           + V+++GIWG  GIGKTT+A+A+F+Q S  F  SCF+ ++  N+  +     L   +LS 
Sbjct: 206 NDVKMIGIWGPAGIGKTTIARALFNQLSTGFRHSCFMGNIDVNNYDSK--LRLHNMLLSK 263

Query: 65  TLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
            L++K       I H    KE +   ++LIVLDDV+++ QL+ L  E   FG  SRI+VT
Sbjct: 264 ILNQK----DMKIHHLGAIKEWLHNQRVLIVLDDVDDLEQLEVLAKESFWFGPRSRIIVT 319

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            +DK++L+     +  IY V+    +EA E FC  AFK++   +     +R VV      
Sbjct: 320 LKDKKILKAHGIND--IYHVDYPSKKEALEIFCLSAFKQSSPQDGFEEFARKVVELCGNL 377

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L V+GSS   + +  W   L+ +    + ++ D+   L++ ++KL  + +S+FL IA
Sbjct: 378 PLALCVVGSSFYGESEDEWRLQLYGIEINLDRKVEDV---LRVGYDKLLEKHQSLFLHIA 434

Query: 243 CFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQE 298
           CFF  E  D+V+++L DS  DV   L  L  KSLV IS +  + MH +LQ++GR +V Q+
Sbjct: 435 CFFNHESVDYVSTMLADSTLDVENGLKNLAAKSLVHISTHGRIRMHCLLQQLGRHVVVQQ 494

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
           S  E GKR  L + KEI  VL +  GT ++ GI  D+SKI   ++  RAF  M NL+  K
Sbjct: 495 S-GEQGKRQFLVEAKEIRDVLANKTGTGSVIGISFDMSKIGEFSISKRAFERMCNLKFLK 553

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
           FY                       V L   + YLP+ LR LHWD+YP ++LP  F+P+ 
Sbjct: 554 FY--------------------NGNVSLLEDMKYLPR-LRLLHWDSYPRKSLPLTFQPEC 592

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
           LVEL++R SK+E  W G        IQ    L                         I+ 
Sbjct: 593 LVELHMRYSKLEMLWGG--------IQPLANLKK-----------------------IDL 621

Query: 479 SYCVNLIEFPQISGKVTRL----YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            Y  NL E P +S K T L     +G  ++  +PSSI  L  LE+LD  GC +L+ I T+
Sbjct: 622 GYSFNLKEIPNLS-KATNLETLKLIGCESLVVLPSSIRNLHKLEMLDASGCSKLQVIPTN 680

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL-PGLEVLFV 593
              L SL  + +  C  L  FP+I   +E+L       T I E P+S       L++L +
Sbjct: 681 I-DLASLEEVKMDNCSRLRSFPDISRNIEYLS---VAGTKIKEFPASIVGYWSRLDILQI 736

Query: 594 EDCS--KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
              S  +L ++P ++ SL+       + S I  +P  V     L  L+  +C+ L S   
Sbjct: 737 GSRSLKRLTHVPQSVKSLDL------SNSDIKMIPDYVIGLPHLGYLNVDNCRKLVSIQG 790

Query: 652 TF--LLGLSA 659
            F  L  LSA
Sbjct: 791 HFPSLASLSA 800



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 156/374 (41%), Gaps = 73/374 (19%)

Query: 558 ILEKMEHLKRI---YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
           +LE M++L R+   + D  P   LP +F+  P   V      SKL+ L   I  L  L  
Sbjct: 561 LLEDMKYLPRLRLLHWDSYPRKSLPLTFQ--PECLVELHMRYSKLEMLWGGIQPLANLKK 618

Query: 615 I-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
           I L  +  + ++P+    +N            LE+     L+G  ++ +L          
Sbjct: 619 IDLGYSFNLKEIPNLSKATN------------LETLK---LIGCESLVVL---------- 653

Query: 674 PQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
           P  I  L  LE+L  SG +  + +P  I  ++ L  + +++ + L+S P++   ++YL +
Sbjct: 654 PSSIRNLHKLEMLDASGCSKLQVIPTNI-DLASLEEVKMDNCSRLRSFPDISRNIEYLSV 712

Query: 733 IDCKMLQSLPVLPFCLESLDL--TGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCL 790
              K+ +    +      LD+   G   L+ L  +P  ++ L+L + + ++ +P+  + L
Sbjct: 713 AGTKIKEFPASIVGYWSRLDILQIGSRSLKRLTHVPQSVKSLDLSNSD-IKMIPDYVIGL 771

Query: 791 ---QLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTN 847
                L V NC +L S+      L  L A       +H   L+    S         F N
Sbjct: 772 PHLGYLNVDNCRKLVSIQGHFPSLASLSA-------EHCISLKSVCCSFHRPISNLMFHN 824

Query: 848 CLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFS 907
           CLKL+  +   I+  S              GY+              I LPG EIP  F+
Sbjct: 825 CLKLDNASKRGIVQLS--------------GYKS-------------ICLPGKEIPAEFT 857

Query: 908 NQSSGSSICIQLPP 921
           +Q+ G+SI I L P
Sbjct: 858 HQTRGNSITISLAP 871


>gi|297805242|ref|XP_002870505.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316341|gb|EFH46764.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1221

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 325/1166 (27%), Positives = 512/1166 (43%), Gaps = 269/1166 (23%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQKQ 60
            V++VGIWG  GIGKT++A+++F+Q S  F+ S  + +++G        E    L+ LQ Q
Sbjct: 146  VRMVGIWGPSGIGKTSIARSMFNQISSSFQLSTIMVNIKGCYPNPCLDEYRAQLQ-LQNQ 204

Query: 61   MLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            MLS  +++K       I H    +ER++  K+ +VLDDV+ +GQL  L   ++ FG+GSR
Sbjct: 205  MLSQIINQK----DIKISHLGVAQERLKDKKVFLVLDDVDRLGQLVAL-ANIEWFGRGSR 259

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            I++ T D RVL  +      IY+V+    +EA E FC +AF +        +H       
Sbjct: 260  IIIITEDLRVLNAYGINH--IYKVDFPSIDEAIEIFCMYAFGQKQ-----PYH------- 305

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
                       G +L    K  W   L  L    + EI  I   LK  ++ L    K +F
Sbjct: 306  -----------GFALRGMSKYEWKITLPRLKTCLDGEIESI---LKFGYDVLCDEDKELF 351

Query: 239  LDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVS--ISGNFLNMHDILQEMGR 292
            L IACFF      + ++ + + LD  +   L IL +KSL+   +   F+ MHD+L + G+
Sbjct: 352  LYIACFFNSGPIYKLEELLKNYLDVGKG--LRILAEKSLIHTLVGAGFVKMHDLLVQFGK 409

Query: 293  QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDA--IEGIFLDLSKIK-GINLDPRAFT 349
            +I R++     GK   L D ++I  VL  +  TD   I GI LDLS+I+   N+  +A  
Sbjct: 410  EISRKQFNHGFGKCQILVDARDICEVLSDDT-TDGRRIIGINLDLSQIEENFNISEKAVK 468

Query: 350  NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLD--YLPKKLRYLHWDTYPL 407
             +SNLR    Y       ++L +M               GL+  Y  +KL  L W  +  
Sbjct: 469  KLSNLRFLNIYSSDLPHPDRLHTMQ--------------GLNCQYF-RKLISLRWMHFQK 513

Query: 408  RTLPSNFKPKNLVELNLRCSKVEQPWEGEKA------CVPSSIQNFKYLSALS------- 454
             +LPS F  + LVEL +  SK+++ WEG K        V S+ +N K L  LS       
Sbjct: 514  TSLPSTFNSEFLVELTMHDSKLQKLWEGTKPLRNIKWMVLSNSKNLKELPDLSTATNLET 573

Query: 455  --FKGCQSLRSFPS------NLHFVCPVTINFSYCVNLIEFPQISGKVTRLY----LGQS 502
               + C SL   PS      NL ++C        C +L+E P  +  VT L      G S
Sbjct: 574  LILENCSSLMELPSSIGKLSNLDYLC-----LGGCSSLLELPSFTKNVTGLVDLDLRGCS 628

Query: 503  AIEEVPSSIECLTDLEVLDL------------------------RGCKRLKRISTSFCKL 538
            ++ E+PSSI    +L +LDL                        +GC  L  + +S   L
Sbjct: 629  SLVEIPSSIGHAINLRILDLSKCSSLVGLPSFVGNAINLRNVYLKGCSNLVELPSSIVDL 688

Query: 539  RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
             +L  L L GC +L   P I   +       SD + + +LPS   N   LE L + +CS 
Sbjct: 689  INLEKLDLSGCSSLVELPCIRNAVNLQMLDLSDCSSLVKLPSFVGNATKLEKLNLTNCSN 748

Query: 599  LDNLP--DNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
            L  LP  DN  +L+ L  +L   S + +LPS++  +  L+ ++  +C  +   P   +  
Sbjct: 749  LLELPSIDNATNLQEL--LLENCSRLMKLPSTLRNAINLQLINLKNCSNVVKIPA--IEN 804

Query: 657  LSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDF 714
            ++ + LL +S   ++ EIP  I  ++SL  LYL+  ++   LP+ I  ++ L+ ++L+D 
Sbjct: 805  VTNLNLLDLSGCSSLVEIPPSIGTVTSLHKLYLNRCSSLVELPSSIGNITSLQELNLQDC 864

Query: 715  NMLQSLP----------ELPLC----LKYLHLIDCKMLQSLPVLPFCLES---LDLTGCN 757
            + L +LP          EL L     +K LHL  C  L+ LP+    LES   LDL  C 
Sbjct: 865  SNLLALPFSIGNLHKLQELHLSFFFFVKQLHLSRCSKLEVLPI-NINLESLKVLDLIFCT 923

Query: 758  MLRSLPELPLCLQYLNLEDCNM------LRSLP--------------ELPLCLQLLT--- 794
             L+  PE+   + YLNL    +      +RS P              E P  L ++T   
Sbjct: 924  RLKIFPEISTNIVYLNLVGTTIEEVPLSIRSWPRLDIFCMSYFENLNEFPHALDIITCLH 983

Query: 795  ----------------------VRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWA 832
                                  +  C RL SLP++   L +LD       +++   L+  
Sbjct: 984  LSGDIQEVATWVKGISRLDQILLYGCKRLVSLPQLPDILSDLD-------TENCASLEKL 1036

Query: 833  PESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRG 892
              S  ++ I   F NC KLN +A + I+  S                             
Sbjct: 1037 DCSFHNSEIRLNFANCFKLNKEARDLIIQTS---------------------------TS 1069

Query: 893  SLIVLPGSEIPDWFSNQSSGSSICIQL---PPHSSCRNLIGFAFCAVL----DSKKVDSD 945
               +LPG E+   F+ +++G S+ ++L   P  +S R    F  C ++    D K  D++
Sbjct: 1070 KYAILPGREVSSSFTYRAAGDSVTVKLNEGPLPTSLR----FKVCVLIIYKGDEKAGDTN 1125

Query: 946  C----FRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPD 1001
                 F  FY+              ++ ++GY  +Y++ L+   + I   +  +     D
Sbjct: 1126 TKHGEFFIFYL--------------QNGNIGY--KYLDPLVTGHQYIFEVEAEVTSSEFD 1169

Query: 1002 GYHHTIATFKFFAERKFYKIKRCGLC 1027
                    F F   R+ +KI  CG+C
Sbjct: 1170 --------FYFAIGREEWKIVECGVC 1187


>gi|240256404|ref|NP_199439.5| Disease resistance protein (TIR-NBS-LRR class) family protein
           [Arabidopsis thaliana]
 gi|332007978|gb|AED95361.1| Disease resistance protein (TIR-NBS-LRR class) family protein
           [Arabidopsis thaliana]
          Length = 1139

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 236/771 (30%), Positives = 354/771 (45%), Gaps = 138/771 (17%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAGG 53
           ++ V++VGIWG  GIGKTT+A+A+F+Q S  F  S F+             R N +    
Sbjct: 211 AEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSREIFSRANPDDHNM 270

Query: 54  LEHLQKQMLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
             HLQ+++LS    E L +    I H     ER++  K+LI++DD+++   L  L+G+  
Sbjct: 271 KLHLQEKLLS----EILRMPDIKIDHLGVLGERLQHQKVLIIVDDLDDQVILDSLVGQTQ 326

Query: 112 QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH 171
            FG GSRI+  T +K  L     E   IY V+    + A    C  AF++   PE     
Sbjct: 327 WFGSGSRIIAVTNNKHFLRAH--EIDHIYEVSLPTQQHALAMLCQSAFRKKSPPEGFEML 384

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHD-IYDILKISFNKL 230
              V  +    PL L VLGS L  + K +W ++L  L    E+ +HD I  IL+IS++ L
Sbjct: 385 VVQVARHVDSLPLGLNVLGSYLRGRDKEYWMEMLPRL----ENGLHDKIEKILRISYDGL 440

Query: 231 -TPRVKSIFLDIACFFEGEDKDFVASILDDSESDV-LDILIDKSLVSISGNFLNMHDILQ 288
            +   K+IF  IAC F   +   + S+L D   ++ L  L+DKS++ +    + MH +LQ
Sbjct: 441 GSEEDKAIFRHIACLFNHMEVTTITSLLTDLGINIGLKNLVDKSIIHVRRGCVEMHRMLQ 500

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
           EMGR+IVR +S  +PGKR  L DP +IS VL    GT  + GI L+  +I  + +   AF
Sbjct: 501 EMGRKIVRTQSIDKPGKREFLVDPNDISDVLSEGIGTQKVLGISLNTGEIDELYVHESAF 560

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             MSNLR  +     F +  +L               LP  LDYLP +L+ L W  +P+R
Sbjct: 561 KGMSNLRFLEIDSKNFGKAGRL--------------YLPESLDYLPPRLKLLCWPNFPMR 606

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKAC----------------------------- 439
            +PSNF+P+NLV L +  SK+ + WEG  +                              
Sbjct: 607 CMPSNFRPENLVTLKMPNSKLHKLWEGVASLTCLKEMDMVGSSNLKEIPDLSMPTNLEIL 666

Query: 440 ----------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
                     +PSSI+N   L  L  + C SL   P+  +      +NF YC  L  FP+
Sbjct: 667 KLGFCKSLVELPSSIRNLNKLLKLDMEFCHSLEILPTGFNLKSLDHLNFRYCSELRTFPE 726

Query: 490 ISGKVTRLYLGQSAIEEVPSSIECLTDL----EVLDLRGCKRLKRISTSFCKLRSLVTLI 545
            S  ++ L L  + IEE P ++E L +L    E  D +    +K + T F ++ S     
Sbjct: 727 FSTNISVLMLFGTNIEEFP-NLENLVELSLSKEESDGKQWDGVKPL-TPFLEMLSPT--- 781

Query: 546 LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD- 604
            L  L LE+ P ++                 ELPSSF+NL  L+ L +  C  L+ LP  
Sbjct: 782 -LKSLKLENIPSLV-----------------ELPSSFQNLNQLKELSITYCRNLETLPTG 823

Query: 605 -NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLL 663
            N+ SL YL +                            C  L SFP       + + +L
Sbjct: 824 INLKSLNYLCF--------------------------KGCSQLRSFPEIS----TNISVL 853

Query: 664 HISDYAVREIPQEIAYLSSLEILYL-SGNNFESLPAIIKQMSQLRFIHLED 713
           ++ +  + E+P +I    +L  L + S +  + L   I +M  L  +   D
Sbjct: 854 NLEETGIEEVPWQIENFFNLTKLTMRSCSKLKCLSLNIPKMKTLWDVDFSD 904



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 33/219 (15%)

Query: 345 PRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLH--W 402
           P   TN+S L LF   + +F  +E L  +S  ++ S  K    +G+  L   L  L    
Sbjct: 725 PEFSTNISVLMLFGTNIEEFPNLENLVELSLSKEESDGKQW--DGVKPLTPFLEMLSPTL 782

Query: 403 DTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLR 462
            +  L  +PS      LVEL                  PSS QN   L  LS   C++L 
Sbjct: 783 KSLKLENIPS------LVEL------------------PSSFQNLNQLKELSITYCRNLE 818

Query: 463 SFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDL 522
           + P+ ++      + F  C  L  FP+IS  ++ L L ++ IEEVP  IE   +L  L +
Sbjct: 819 TLPTGINLKSLNYLCFKGCSQLRSFPEISTNISVLNLEETGIEEVPWQIENFFNLTKLTM 878

Query: 523 RGCKRLKRISTSFCKLRSLVTLILLGC-----LNLEHFP 556
           R C +LK +S +  K+++L  +    C     +NL  +P
Sbjct: 879 RSCSKLKCLSLNIPKMKTLWDVDFSDCAALTVVNLSGYP 917



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 183/463 (39%), Gaps = 105/463 (22%)

Query: 572  RTPITELPSSFENLPGLEVLFVED---CSKLDNLPDNIGSLEYLYYILAAASAISQLPSS 628
            + P ++L   +E +  L  L   D    S L  +PD           L    ++ +LPSS
Sbjct: 621  KMPNSKLHKLWEGVASLTCLKEMDMVGSSNLKEIPDLSMPTNLEILKLGFCKSLVELPSS 680

Query: 629  VALSNMLRSLDSSHCKGLESFPRTF-LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
            +   N L  LD   C  LE  P  F L  L  +   + S+  +R  P+   + +++ +L 
Sbjct: 681  IRNLNKLLKLDMEFCHSLEILPTGFNLKSLDHLNFRYCSE--LRTFPE---FSTNISVLM 735

Query: 688  LSGNNFESLPAI--------------------IKQMS--------QLRFIHLEDFNMLQS 719
            L G N E  P +                    +K ++         L+ + LE+   + S
Sbjct: 736  LFGTNIEEFPNLENLVELSLSKEESDGKQWDGVKPLTPFLEMLSPTLKSLKLEN---IPS 792

Query: 720  LPELPLC------LKYLHLIDCKMLQSLPVLPFCLESLD---LTGCNMLRSLPELPLCLQ 770
            L ELP        LK L +  C+ L++LP     L+SL+     GC+ LRS PE+   + 
Sbjct: 793  LVELPSSFQNLNQLKELSITYCRNLETLPT-GINLKSLNYLCFKGCSQLRSFPEISTNIS 851

Query: 771  YLNLEDCNMLRSLPELP------LCLQLLTVRNCNRLQ----SLPEILLCLQELDASVLE 820
             LNLE+      + E+P        L  LT+R+C++L+    ++P+ +  L ++D S   
Sbjct: 852  VLNLEET----GIEEVPWQIENFFNLTKLTMRSCSKLKCLSLNIPK-MKTLWDVDFSDCA 906

Query: 821  KLS----KHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLR 876
             L+       P    + E   S     +F  C  L+ +    +L    +    MA     
Sbjct: 907  ALTVVNLSGYPSDTLSEEEDDSLDPFLDFRGCFSLDPET---VLHQESVIFNSMA----- 958

Query: 877  LGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSIC---IQLPPHSSCRNLIGFAF 933
                                 PG ++P +F+ +++G+S     I L P    +    F  
Sbjct: 959  --------------------FPGEQVPSYFTYRTTGTSTILPNIPLLPTQLSQPFFRFRV 998

Query: 934  CAV-----LDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDL 971
            CAV     + S +V+S     F  SF F  E   L E +  D+
Sbjct: 999  CAVATAFNIVSIQVNSRFTGRFGNSFDFFGEGHELMEIRKGDM 1041


>gi|10177708|dbj|BAB11082.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1145

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 236/771 (30%), Positives = 354/771 (45%), Gaps = 138/771 (17%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAGG 53
           ++ V++VGIWG  GIGKTT+A+A+F+Q S  F  S F+             R N +    
Sbjct: 200 AEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSREIFSRANPDDHNM 259

Query: 54  LEHLQKQMLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
             HLQ+++LS    E L +    I H     ER++  K+LI++DD+++   L  L+G+  
Sbjct: 260 KLHLQEKLLS----EILRMPDIKIDHLGVLGERLQHQKVLIIVDDLDDQVILDSLVGQTQ 315

Query: 112 QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH 171
            FG GSRI+  T +K  L     E   IY V+    + A    C  AF++   PE     
Sbjct: 316 WFGSGSRIIAVTNNKHFLRAH--EIDHIYEVSLPTQQHALAMLCQSAFRKKSPPEGFEML 373

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHD-IYDILKISFNKL 230
              V  +    PL L VLGS L  + K +W ++L  L    E+ +HD I  IL+IS++ L
Sbjct: 374 VVQVARHVDSLPLGLNVLGSYLRGRDKEYWMEMLPRL----ENGLHDKIEKILRISYDGL 429

Query: 231 -TPRVKSIFLDIACFFEGEDKDFVASILDDSESDV-LDILIDKSLVSISGNFLNMHDILQ 288
            +   K+IF  IAC F   +   + S+L D   ++ L  L+DKS++ +    + MH +LQ
Sbjct: 430 GSEEDKAIFRHIACLFNHMEVTTITSLLTDLGINIGLKNLVDKSIIHVRRGCVEMHRMLQ 489

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
           EMGR+IVR +S  +PGKR  L DP +IS VL    GT  + GI L+  +I  + +   AF
Sbjct: 490 EMGRKIVRTQSIDKPGKREFLVDPNDISDVLSEGIGTQKVLGISLNTGEIDELYVHESAF 549

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             MSNLR  +     F +  +L               LP  LDYLP +L+ L W  +P+R
Sbjct: 550 KGMSNLRFLEIDSKNFGKAGRL--------------YLPESLDYLPPRLKLLCWPNFPMR 595

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKAC----------------------------- 439
            +PSNF+P+NLV L +  SK+ + WEG  +                              
Sbjct: 596 CMPSNFRPENLVTLKMPNSKLHKLWEGVASLTCLKEMDMVGSSNLKEIPDLSMPTNLEIL 655

Query: 440 ----------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
                     +PSSI+N   L  L  + C SL   P+  +      +NF YC  L  FP+
Sbjct: 656 KLGFCKSLVELPSSIRNLNKLLKLDMEFCHSLEILPTGFNLKSLDHLNFRYCSELRTFPE 715

Query: 490 ISGKVTRLYLGQSAIEEVPSSIECLTDL----EVLDLRGCKRLKRISTSFCKLRSLVTLI 545
            S  ++ L L  + IEE P ++E L +L    E  D +    +K + T F ++ S     
Sbjct: 716 FSTNISVLMLFGTNIEEFP-NLENLVELSLSKEESDGKQWDGVKPL-TPFLEMLSPT--- 770

Query: 546 LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD- 604
            L  L LE+ P ++                 ELPSSF+NL  L+ L +  C  L+ LP  
Sbjct: 771 -LKSLKLENIPSLV-----------------ELPSSFQNLNQLKELSITYCRNLETLPTG 812

Query: 605 -NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLL 663
            N+ SL YL +                            C  L SFP       + + +L
Sbjct: 813 INLKSLNYLCF--------------------------KGCSQLRSFPEIS----TNISVL 842

Query: 664 HISDYAVREIPQEIAYLSSLEILYL-SGNNFESLPAIIKQMSQLRFIHLED 713
           ++ +  + E+P +I    +L  L + S +  + L   I +M  L  +   D
Sbjct: 843 NLEETGIEEVPWQIENFFNLTKLTMRSCSKLKCLSLNIPKMKTLWDVDFSD 893



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 33/219 (15%)

Query: 345 PRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLH--W 402
           P   TN+S L LF   + +F  +E L  +S  ++ S  K    +G+  L   L  L    
Sbjct: 714 PEFSTNISVLMLFGTNIEEFPNLENLVELSLSKEESDGKQW--DGVKPLTPFLEMLSPTL 771

Query: 403 DTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLR 462
            +  L  +PS      LVEL                  PSS QN   L  LS   C++L 
Sbjct: 772 KSLKLENIPS------LVEL------------------PSSFQNLNQLKELSITYCRNLE 807

Query: 463 SFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDL 522
           + P+ ++      + F  C  L  FP+IS  ++ L L ++ IEEVP  IE   +L  L +
Sbjct: 808 TLPTGINLKSLNYLCFKGCSQLRSFPEISTNISVLNLEETGIEEVPWQIENFFNLTKLTM 867

Query: 523 RGCKRLKRISTSFCKLRSLVTLILLGC-----LNLEHFP 556
           R C +LK +S +  K+++L  +    C     +NL  +P
Sbjct: 868 RSCSKLKCLSLNIPKMKTLWDVDFSDCAALTVVNLSGYP 906



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 183/463 (39%), Gaps = 105/463 (22%)

Query: 572  RTPITELPSSFENLPGLEVLFVED---CSKLDNLPDNIGSLEYLYYILAAASAISQLPSS 628
            + P ++L   +E +  L  L   D    S L  +PD           L    ++ +LPSS
Sbjct: 610  KMPNSKLHKLWEGVASLTCLKEMDMVGSSNLKEIPDLSMPTNLEILKLGFCKSLVELPSS 669

Query: 629  VALSNMLRSLDSSHCKGLESFPRTF-LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
            +   N L  LD   C  LE  P  F L  L  +   + S+  +R  P+   + +++ +L 
Sbjct: 670  IRNLNKLLKLDMEFCHSLEILPTGFNLKSLDHLNFRYCSE--LRTFPE---FSTNISVLM 724

Query: 688  LSGNNFESLPAI--------------------IKQMS--------QLRFIHLEDFNMLQS 719
            L G N E  P +                    +K ++         L+ + LE+   + S
Sbjct: 725  LFGTNIEEFPNLENLVELSLSKEESDGKQWDGVKPLTPFLEMLSPTLKSLKLEN---IPS 781

Query: 720  LPELPLC------LKYLHLIDCKMLQSLPVLPFCLESLD---LTGCNMLRSLPELPLCLQ 770
            L ELP        LK L +  C+ L++LP     L+SL+     GC+ LRS PE+   + 
Sbjct: 782  LVELPSSFQNLNQLKELSITYCRNLETLPT-GINLKSLNYLCFKGCSQLRSFPEISTNIS 840

Query: 771  YLNLEDCNMLRSLPELP------LCLQLLTVRNCNRLQ----SLPEILLCLQELDASVLE 820
             LNLE+      + E+P        L  LT+R+C++L+    ++P+ +  L ++D S   
Sbjct: 841  VLNLEET----GIEEVPWQIENFFNLTKLTMRSCSKLKCLSLNIPK-MKTLWDVDFSDCA 895

Query: 821  KLS----KHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLR 876
             L+       P    + E   S     +F  C  L+ +    +L    +    MA     
Sbjct: 896  ALTVVNLSGYPSDTLSEEEDDSLDPFLDFRGCFSLDPET---VLHQESVIFNSMA----- 947

Query: 877  LGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSIC---IQLPPHSSCRNLIGFAF 933
                                 PG ++P +F+ +++G+S     I L P    +    F  
Sbjct: 948  --------------------FPGEQVPSYFTYRTTGTSTILPNIPLLPTQLSQPFFRFRV 987

Query: 934  CAV-----LDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDL 971
            CAV     + S +V+S     F  SF F  E   L E +  D+
Sbjct: 988  CAVATAFNIVSIQVNSRFTGRFGNSFDFFGEGHELMEIRKGDM 1030


>gi|356506553|ref|XP_003522044.1| PREDICTED: probable WRKY transcription factor 19-like [Glycine max]
          Length = 1026

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 236/670 (35%), Positives = 333/670 (49%), Gaps = 85/670 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V ++GIWG+GG GKTT+A+ +F +   E+E  CF+++V+      G +  L++++ +
Sbjct: 129 SKDVCVIGIWGVGGNGKTTIAQEVFSKLYLEYESCCFLANVKEEIRRLGVIS-LKEKLFA 187

Query: 64  TTLSEKLEV-AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
           + L + + +     +    K+ + + K+LIVLDDVN+  QL+ L G  D +G GSRI++T
Sbjct: 188 SILQKYVNIKTQKGLSSSIKKMMGQKKVLIVLDDVNDSEQLEELFGTPDWYGSGSRIIIT 247

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TRD +VL     +  +IY V GL   EAF+ F   AF +     +    S+ VV Y KG 
Sbjct: 248 TRDIKVL--IANKVPEIYHVGGLSSCEAFQLFKLNAFNQGDLEMEFYELSKRVVDYAKGI 305

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PLVL++L   LC K K  W   L  L  I  + +HD    +K+SF+ L    + I LD+A
Sbjct: 306 PLVLKILAHLLCGKDKEVWKSQLEKLKGIKSNNVHDF---VKLSFDDLHHEEQEILLDLA 362

Query: 243 CFFEGEDK--------DFVASILDDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQ 288
           CF    +         D +  +L D  S       L+ L +KSL++IS  N ++M D +Q
Sbjct: 363 CFCRRANMIENFNMKVDSINILLGDCGSHNAVVVGLERLKEKSLITISEDNVVSMLDTIQ 422

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
           EM  +IV QES  + G RSRLWDP EI  VLK++KGT AI  I   LS +K + L P AF
Sbjct: 423 EMAWEIVCQES-NDLGNRSRLWDPIEIYDVLKNDKGTKAIRSITTPLSTLKNLKLRPDAF 481

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             MSNL+   F                      +   LP GL  LP +LRYLHW  YPL 
Sbjct: 482 VRMSNLQFLDF--------------------GNNSPSLPQGLQSLPNELRYLHWIHYPLT 521

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            LP  F  + LV L+L CS+VE+ W          ++N   L  +  + C  L   P   
Sbjct: 522 CLPEQFSAEKLVILDLSCSRVEKLWH--------EVKNLVNLKNVKLRWCVLLNELP--- 570

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
                   +FS   NL        KV  +    S +  V  SI  L  LE LDL GC  L
Sbjct: 571 --------DFSKSTNL--------KVLDVSCS-SGLTSVHPSIFSLHKLEKLDLSGCSSL 613

Query: 529 KRIST-SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTP--ITELPSSFENL 585
            + S+     L SL+ L L  C  L  F    E +  L     D T   I+ LP SF +L
Sbjct: 614 IKFSSDDDGHLSSLLYLNLSDCEELREFSVTAENVVEL-----DLTGILISSLPLSFGSL 668

Query: 586 PGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCK 644
             LE+L +   S +++LP  I +L  L Y+ L+  S +  LP    L   L +L +  C+
Sbjct: 669 RKLEMLHLIR-SDIESLPTCINNLTRLRYLDLSCCSNLCILPK---LPPSLETLHADECE 724

Query: 645 GLES--FPRT 652
            LE+  FP T
Sbjct: 725 SLETVLFPST 734



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 21/188 (11%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           + +L    +NL  L+ + +  C  L+ LPD   S       ++ +S ++ +  S+   + 
Sbjct: 542 VEKLWHEVKNLVNLKNVKLRWCVLLNELPDFSKSTNLKVLDVSCSSGLTSVHPSIFSLHK 601

Query: 635 LRSLDSSHCKGLESFP---------------------RTFLLGLSAMGLLHISDYAVREI 673
           L  LD S C  L  F                      R F +    +  L ++   +  +
Sbjct: 602 LEKLDLSGCSSLIKFSSDDDGHLSSLLYLNLSDCEELREFSVTAENVVELDLTGILISSL 661

Query: 674 PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI 733
           P     L  LE+L+L  ++ ESLP  I  +++LR++ L   + L  LP+LP  L+ LH  
Sbjct: 662 PLSFGSLRKLEMLHLIRSDIESLPTCINNLTRLRYLDLSCCSNLCILPKLPPSLETLHAD 721

Query: 734 DCKMLQSL 741
           +C+ L+++
Sbjct: 722 ECESLETV 729



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 68/257 (26%)

Query: 734 DCKMLQSLPVLPFCLESLDLTGCNMLRSLP--------------------ELPLC----- 768
           DC+ L+   V    +  LDLTG  ++ SLP                     LP C     
Sbjct: 634 DCEELREFSVTAENVVELDLTGI-LISSLPLSFGSLRKLEMLHLIRSDIESLPTCINNLT 692

Query: 769 -LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSP 827
            L+YL+L  C+ L  LP+LP  L+ L    C  L+++           ++ +E+  ++  
Sbjct: 693 RLRYLDLSCCSNLCILPKLPPSLETLHADECESLETVL--------FPSTAVEQFEENRK 744

Query: 828 DLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKL 887
            +              EF NCLKL+  +   I  ++ + +   A   L       I + +
Sbjct: 745 RV--------------EFWNCLKLDEFSLMAIELNAQINVMKFAYQHL----SAPILDHV 786

Query: 888 SELRGSLIVLPGSEIPDWFSNQSSGSSICIQL----PPHSSCRNLIGFAFCAVLDSKKVD 943
            +   ++ + PGS +P+W + ++    + I L    P H      +GF FC +L     D
Sbjct: 787 HDSYQAVYMYPGSSVPEWLAYKTRKDYVIIDLSSTPPAH------LGFIFCFIL-----D 835

Query: 944 SDCFRYFYVSFQFDLEI 960
            D   +   + QF + I
Sbjct: 836 KDTEEFLGPALQFSISI 852


>gi|356514972|ref|XP_003526175.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1158

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 240/766 (31%), Positives = 372/766 (48%), Gaps = 115/766 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S   V++VGI GMGGIGKTTLA A++++ +++++      DV    +  G L  +QKQ
Sbjct: 219 LESVTDVRVVGISGMGGIGKTTLALALYEKIAYQYD------DVNKIYQHYGSLG-VQKQ 271

Query: 61  MLSTTLS-EKLEVAG-PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF----- 113
           +L   L+ E LE+       +    R+R  + LIVLD+V++V QL    G  +       
Sbjct: 272 LLDQCLNDENLEICNVSRGTYLIGTRLRNKRGLIVLDNVSQVEQLHMFTGSRETLLRECL 331

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSR 173
           G GSRI++ +RD+ +L         +YRV  L  + A + FCN AFK ++   D    + 
Sbjct: 332 GGGSRIIIISRDEHILRTHGVNH--VYRVRPLNQDNAVQLFCNNAFKCDYIMSDYKMLTH 389

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
             + + +G+PL ++V+G SL     S W   L    R+ E++  +I D+++IS++ L  +
Sbjct: 390 DALWHAQGHPLAIKVIGKSLFGLDVSQWEGTL---VRLSENKSKNIMDVIRISYDALEEK 446

Query: 234 VKSIFLDIACF-----FEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQ 288
            K IFLDIACF     FE   K+ +     +SE   L IL+DKSL++IS   + MHD+L+
Sbjct: 447 DKEIFLDIACFSGQHYFEDNVKEILNFRGFNSEIG-LQILVDKSLITISYGKIYMHDLLR 505

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFL--DLSKIKGINLDPR 346
           ++G+ IVR++S KEP K SRLWD +++ + +  NK    +E I +  +        +   
Sbjct: 506 DLGKCIVREKSPKEPRKWSRLWDCEDLYKFMSSNKEAKNLEAIVVEDEPGMFSETTMRFD 565

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           A + M NL+L    +P++YE      +ST E+  +S       L+YL  +L YL W  YP
Sbjct: 566 ALSKMKNLKL--LILPRYYE----KGLSTIEEEKFS-----GSLNYLSNELGYLIWHFYP 614

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPS-------------SIQNFK--YLS 451
              LP  F+P NLVELNL  S ++  W+  +  +P+              +Q+F+   L 
Sbjct: 615 FNFLPKCFQPHNLVELNLSGSNIQHLWDSTQP-IPNLRRLNVSDCDNLIEVQDFEDLNLE 673

Query: 452 ALSFKGCQSLRSF-PSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSS 510
            L+ +GC  LR   PS  H      +N  YC +L+  P               +E++   
Sbjct: 674 ELNLQGCVQLRQIHPSIGHLKKLTHLNLKYCKSLVNLPHF-------------VEDL--- 717

Query: 511 IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYS 570
                +LE L+L+GC +L++I  S    + L  L L  C +L + P  +  +   +    
Sbjct: 718 -----NLEELNLQGCVQLRQIHPSIGHPKKLTHLNLKYCKSLVNLPHFVGDLNLKELNLE 772

Query: 571 DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI------------LAA 618
               + ++  S  +L  L VL ++DC  L + P NI  L  L Y+            L+ 
Sbjct: 773 GCVQLRQIHPSIGHLRKLTVLNLKDCKSLISFPSNILGLSSLTYLSLFGCSNLHTIDLSE 832

Query: 619 ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIA 678
            S    LPS    S M R LD S C  L                         +IP    
Sbjct: 833 DSVRCLLPSYTIFSCM-RQLDLSFCNLL-------------------------KIPDAFG 866

Query: 679 YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
            L SLE L L GNNFE+LP++ +    L    L+    L+ LPELP
Sbjct: 867 NLHSLEKLCLRGNNFETLPSLEELSKLLLLN-LQHCKRLKYLPELP 911


>gi|308171398|gb|ADO15993.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171402|gb|ADO15995.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171404|gb|ADO15996.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171406|gb|ADO15997.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1052

 Score =  281 bits (718), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 257/796 (32%), Positives = 372/796 (46%), Gaps = 120/796 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V ++GI G+GGIGK+TLA A+++  +  F+GSCF+ D+R  S   G L+HLQ  
Sbjct: 205 VESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREKSNKKG-LQHLQSI 263

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +L   L EK      +E     I H    R++R K+L++LDDV++  QL+ ++G    FG
Sbjct: 264 LLREILGEKEINLASVEQGASIIQH----RLQRKKVLLILDDVDKHEQLQAIVGRPCWFG 319

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK++L       K+ Y V  L    A +     +FK              
Sbjct: 320 PGSRVIITTRDKQLLASHG--VKRTYEVELLNENNALQLLTWKSFKTEKVDPSYKEVLND 377

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV Y  G PL LEV+GS+L  K    W   +    RI   +I    +ILK+SF+ L    
Sbjct: 378 VVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQI---LEILKVSFDALEEEQ 434

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNF------LNMH 284
           K++FLDIAC F   D   V  IL     D +     +L++KSL+    ++      + MH
Sbjct: 435 KNVFLDIACCFNRYDLTKVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPRVTMH 494

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG---- 340
           D++++MG++IVRQES KEP KRSRLW P++I  VL+ N+GT  IE I LD          
Sbjct: 495 DLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKEEIV 554

Query: 341 INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYL 400
           + L+ +AF  M NL+       KF                        G  YLP  LR L
Sbjct: 555 VELNTKAFKKMKNLKTLIIRNGKF----------------------SKGPKYLPNNLRVL 592

Query: 401 HWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSS-----IQNFKYLSALSF 455
            W  YP   LPS+F PK L    L  S           C+ S       + F  L  L+F
Sbjct: 593 EWWRYPSHCLPSDFHPKKLAICKLPFS-----------CISSFELDGLWKMFVNLRILNF 641

Query: 456 KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT 515
             C+ L   P           +F  C NLI                     V +SI  L 
Sbjct: 642 DRCEGLTQIPDVSGLPNLEEFSFECCFNLI--------------------TVHNSIGFLD 681

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
            L++L+   CKRL+       KL SL  L L  C +LE FP+IL KME+++++    + I
Sbjct: 682 KLKILNAFRCKRLRSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSI 739

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
           TELP SF+NL GL                    LE L+    +   I ++PSS+ L   L
Sbjct: 740 TELPFSFQNLAGLR------------------GLELLFL---SPHTIFKVPSSIVLMPEL 778

Query: 636 RSLDSSHCKGL------ESFPRTFLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILY 687
             + +   KG       E   +T  +  S + +L +S   + +     +  + + ++ L 
Sbjct: 779 TVIRALGLKGWQWLKQEEGEEKTGSIVSSMVEMLTVSSCNLCDEFFSIDFTWFAHMKELC 838

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC 747
           LS NNF  LP  IK+   LR + +     L+ +  +P  LK+   I+CK L S  +  F 
Sbjct: 839 LSKNNFTILPECIKECQFLRKLDVCGCKHLREIRGIPPNLKHFFAINCKSLTSSSIRKFL 898

Query: 748 LESLDLTGCNMLRSLP 763
            + L   G N +  LP
Sbjct: 899 NQELHEAG-NTVFCLP 913



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 146/349 (41%), Gaps = 73/349 (20%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +T++P     LP LE    E C  L  + ++IG L+ L  + A      +    + L++ 
Sbjct: 647 LTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPIKLTS- 704

Query: 635 LRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIP---QEIAYLSSLEILYLSG 690
           L  L+ S C  LESFP+  +LG +  +  L +S+ ++ E+P   Q +A L  LE+L+LS 
Sbjct: 705 LEKLNLSFCYSLESFPK--ILGKMENIRQLCLSESSITELPFSFQNLAGLRGLELLFLSP 762

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLES 750
           +    +P+ I  M +L  I        Q L +           +    ++  ++   +E 
Sbjct: 763 HTIFKVPSSIVLMPELTVIRALGLKGWQWLKQ-----------EEGEEKTGSIVSSMVEM 811

Query: 751 LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
           L ++ CN         LC ++ ++ D      + EL L     T+        LPE   C
Sbjct: 812 LTVSSCN---------LCDEFFSI-DFTWFAHMKELCLSKNNFTI--------LPE---C 850

Query: 811 LQELDASVLEKLS----KHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLR 866
           ++E     L KL     KH  +++  P +LK     F   NC  L   +  K L      
Sbjct: 851 IKE--CQFLRKLDVCGCKHLREIRGIPPNLKH----FFAINCKSLTSSSIRKFL------ 898

Query: 867 IRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSI 915
                            N++L E   ++  LPG  IP+WF  QS G SI
Sbjct: 899 -----------------NQELHEAGNTVFCLPGKRIPEWFDQQSRGPSI 930


>gi|22327500|ref|NP_198989.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007335|gb|AED94718.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1046

 Score =  281 bits (718), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 219/652 (33%), Positives = 321/652 (49%), Gaps = 98/652 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFD-QFSHEFEGSCFVSDVRGNSETAGGLEH-----L 57
           SD V+++GIWG  GIGKTT+A+A+FD + S  F+  CF+ +++G+    G  +H     L
Sbjct: 194 SDEVKMIGIWGPAGIGKTTIARALFDDRLSSSFQHKCFMGNLKGS--IKGVADHDSKLRL 251

Query: 58  QKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           QKQ+LS    E+       I H    +ER+   ++LI+LDDV+++ QL+ L  E+  FG 
Sbjct: 252 QKQLLSKIFKEE----NMKIHHLGAIRERLHDQRVLIILDDVDDLKQLEVLAKEISWFGS 307

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           GSRI+ TT DK++L K  G    IYRV+    ++A E  C  AFK++  P+     +  V
Sbjct: 308 GSRIIGTTEDKKIL-KAHGIHN-IYRVDFPSKKDALEILCLSAFKQSSIPDGFEELANKV 365

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
                  PL L V+G+SL  +    W ++L   +RI  S   DI DIL+I +++L    K
Sbjct: 366 AKLCSNLPLGLCVVGASLRGEGNQEWERLL---SRIESSLDRDIDDILRIGYDRLLTNDK 422

Query: 236 SIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGR 292
           S+FL IACFF     D V ++L DS  DV    + L D+SLV IS  + +   +L +   
Sbjct: 423 SLFLHIACFFNYAKVDNVTALLADSNLDVGNGFNTLADRSLVRIS-TYDDGISVLSDSNL 481

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
            IV ++S KEPGKR  + +P+EI  VL +  GT ++ GI  D S I  +++   AF  M 
Sbjct: 482 DIVLEQS-KEPGKREFIIEPEEIRDVLTNETGTGSVIGISFDTSNIGEVSVSKDAFEGMR 540

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NLR  + Y     E+                +Q+P  +DY+P+ LR L+WD YP ++LP 
Sbjct: 541 NLRFLRIYRLLGGEV---------------TLQIPEDMDYIPR-LRLLYWDRYPRKSLPR 584

Query: 413 NFKPKNLVELNLRCSKVEQPWEG------------------------EKAC--------- 439
            FKP+ LVEL++  S +E  W G                         KA          
Sbjct: 585 RFKPERLVELHMPRSNLELLWGGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLES 644

Query: 440 ------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
                 +PSSI N   L  L  K C  L+  P+N++      ++ S C  L  FP IS  
Sbjct: 645 CLSLVELPSSISNLHKLEILDVKFCSMLQVIPTNINLASLERLDVSGCSRLRTFPDISSN 704

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDL--RGCKRLKRISTSFCKLRSLVTLILLGCLN 551
           +  L  G   IE+VP S+ C + L+ L +  R  KRL  +          +TL+ L    
Sbjct: 705 IKTLIFGNIKIEDVPPSVGCWSRLDQLHISSRSLKRLMHVPPC-------ITLLSLRGSG 757

Query: 552 LEHFPEILEKMEHLKRIYSDR----TPITELPSSFENLPGLEVLFVEDCSKL 599
           +E   + +  +  L  +  D       I  LPSS      L+VL   DC  L
Sbjct: 758 IERITDCVIGLTRLHWLNVDSCRKLKSILGLPSS------LKVLDANDCVSL 803



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 158/416 (37%), Gaps = 121/416 (29%)

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF--------------- 582
           LR L    LLG       PE ++ +  L+ +Y DR P   LP  F               
Sbjct: 542 LRFLRIYRLLGGEVTLQIPEDMDYIPRLRLLYWDRYPRKSLPRRFKPERLVELHMPRSNL 601

Query: 583 -------ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
                  E LP L+++ +    +L  +P+   +       L +  ++ +LPSS++  + L
Sbjct: 602 ELLWGGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLESCLSLVELPSSISNLHKL 661

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFE 694
             LD   C  L+  P                             L+SLE L +SG +   
Sbjct: 662 EILDVKFCSMLQVIPTNI-------------------------NLASLERLDVSGCSRLR 696

Query: 695 SLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC---LKYLHLIDCKMLQSLPVLPFCLESL 751
           + P I   +  L F +++    ++ +P    C   L  LH I  + L+ L  +P C+  L
Sbjct: 697 TFPDISSNIKTLIFGNIK----IEDVPPSVGCWSRLDQLH-ISSRSLKRLMHVPPCITLL 751

Query: 752 DLTGCNMLRSLPELPLC------LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLP 805
            L G  + R    +  C      L +LN++ C  L+S+  LP  L++L   +C  L+ + 
Sbjct: 752 SLRGSGIER----ITDCVIGLTRLHWLNVDSCRKLKSILGLPSSLKVLDANDCVSLKRV- 806

Query: 806 EILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLL 865
                          + S H+P                +F NCLKL+ +A   I+  S+ 
Sbjct: 807 ---------------RFSFHNP------------MHTLDFNNCLKLDEEAKRGIIQRSVS 839

Query: 866 RIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
           R                            I LP  +IP+ F+++++G SI I L P
Sbjct: 840 R---------------------------YICLPCKKIPEEFTHKATGKSITIPLAP 868


>gi|297794605|ref|XP_002865187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311022|gb|EFH41446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1162

 Score =  281 bits (718), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 248/748 (33%), Positives = 368/748 (49%), Gaps = 86/748 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAGG 53
           S  V++VGIWG  GIGKT++A+ ++ + SH F+ S FV               NS+    
Sbjct: 204 SKEVRMVGIWGSSGIGKTSIARVLYSRLSHRFQSSVFVDRAFISKSTEIYNSANSDDYNM 263

Query: 54  LEHLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
             HLQK  LS  L +K       I H    +ER++  K+LI +DD+++   L  L G   
Sbjct: 264 KLHLQKVFLSKILDKK----DIKIHHLGAVEERLKHHKVLIFIDDLDDQVVLDTLAGLTQ 319

Query: 112 QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH 171
            FG GSRI+V T+DK  L     E   IY V     E A + FC  AF++N+ P+ L   
Sbjct: 320 WFGYGSRIIVITKDKHFLRAHGIE--YIYNVCLPSNELALKIFCRSAFRKNYPPDGL-ME 376

Query: 172 SRSVVSYTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
             S V+   GN PL L VLGS L  + K     +L  L    + +I      L++S+N L
Sbjct: 377 LASEVALCAGNLPLGLNVLGSHLRGRDKEDLMDMLPRLRNGLDGKIEKT---LRVSYNGL 433

Query: 231 T-PRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDI 286
              + K+IF  IAC F GE  D +  +L DS  DV   L  L+DKSL+ +    + MH +
Sbjct: 434 NNQKDKAIFRHIACLFNGEKVDDIKLLLADSGLDVNIGLKNLVDKSLIHVREEIVEMHSL 493

Query: 287 LQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR 346
           LQEMG++IVR +S  EPG+R  L D K+I  +L+ + GT  + GI LD+ +I  +++   
Sbjct: 494 LQEMGKEIVRSQS-NEPGEREFLMDAKDICDLLEDSTGTKKVLGITLDMDEIDELHIHEN 552

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           AF  M NL   K Y  K+            ++ +  +  LP G +YLP KLR+L  D YP
Sbjct: 553 AFKGMHNLLFLKVYTKKW------------DKKTEVRWHLPKGFNYLPHKLRFLRLDGYP 600

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS 466
           +R +PS F+P+NLV+L +  SK+E+ WEG        + +F+ L  +  +  ++L+  P 
Sbjct: 601 MRCMPSKFRPENLVKLEMSGSKLERLWEG--------VHSFRGLRDIDLQKSENLKEIPD 652

Query: 467 NLHFVCPVTINFSYCVNLIEFP---QISGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDL 522
                   T+N   C NL+E P   Q   K+ +L + G   +E +P  I  L  L  L+L
Sbjct: 653 LSMATSLKTLNLCDCSNLVELPLSIQYLNKLEKLEMSGCINLENLPIGIN-LKSLGRLNL 711

Query: 523 RGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILE-----------KMEHL-KRIYS 570
            GC RLK     F  + + ++ ++L    +E FP  L            K E L  R+  
Sbjct: 712 GGCSRLK----IFPDISTNISWLILDETGIETFPSNLPLENLFLHLCEMKSEKLWGRVQQ 767

Query: 571 DRTPI-TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAIS--QLPS 627
             TP+ T LP S      L  LF+ D   L  LP +I +   L   LA  + I+   LPS
Sbjct: 768 PLTPLMTILPHS------LARLFLSDIPSLVELPASIQNFTKLNR-LAIENCINLETLPS 820

Query: 628 SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
            +    +L  LD   C  L +FP       + + +L++    + E+P  I   S+L  L 
Sbjct: 821 GINFP-LLLDLDLRGCSRLRTFPDIS----TNIYMLNVPRTGIEEVPWWIEKFSNLVRLC 875

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFN 715
           + G N   L  +   +S+L+ +   DF+
Sbjct: 876 MGGCN--KLQCVSLHISKLKHLGDVDFS 901


>gi|297791059|ref|XP_002863414.1| hypothetical protein ARALYDRAFT_494346 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309249|gb|EFH39673.1| hypothetical protein ARALYDRAFT_494346 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1170

 Score =  281 bits (718), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 233/768 (30%), Positives = 358/768 (46%), Gaps = 128/768 (16%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSD--VRGNSETAGGL----EHL 57
           S+ V++VGIWG  GIGKTT+A+A+F+Q S  F+ S F+    V  + E   G      ++
Sbjct: 200 SEEVRMVGIWGSSGIGKTTIARALFNQLSRNFQVSKFIDRAFVYKSREIYSGANPDDHNM 259

Query: 58  QKQMLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           +  +  + LSE L +    I H     ER++  K+LI++DD+++   L  L+G+   FG 
Sbjct: 260 KLNLQESFLSEILRMPDIKIDHLGVLGERLQHQKVLIIVDDLDDQVILDSLVGQTQWFGS 319

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           GSRI+V T +K  L     +   IY ++    E A    C  AF++   PE        V
Sbjct: 320 GSRIIVVTNNKHFLRAHGIDH--IYELSLPTEEHAVAMLCQSAFRKKSPPEGFEMLVVQV 377

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL-TPRV 234
             +    PL L VLGS L  + K +W  +L  L    + +I  I   L+IS++ L +   
Sbjct: 378 ARHAGSLPLGLNVLGSCLRGRDKEYWVDMLPRLQNSLDDKIEKI---LRISYDGLGSAED 434

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMG 291
           ++IF  IAC F   D   + S+L DS+  V   L  L+DKSL+ +    + MH +LQEMG
Sbjct: 435 QAIFRHIACIFNHMDVTTIKSLLADSKLGVNVGLQNLVDKSLIHVRWGHVEMHRLLQEMG 494

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           + IVR +S  + GKR  L DP +I  VL     T  + GI L+ SKI  + +   AF  M
Sbjct: 495 QNIVRTQSIDKLGKREFLVDPNDICDVLSEGIDTRKVLGISLETSKIDQLCVHKSAFKGM 554

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NLR  K     F E  +L               LP   +YLP  L+ L W  +P+R +P
Sbjct: 555 RNLRFLKIGTDIFGEENRL--------------DLPESFNYLPPTLKLLCWSEFPMRCMP 600

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGE----------------------------------- 436
           SNF+P+NLV+L +  SK+ + W+G                                    
Sbjct: 601 SNFRPENLVKLKMPNSKLHKLWDGVVPLTCLKEMDLDGSVNLKEIPDLSMATNLETLELG 660

Query: 437 --KACV--PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
             K+ V  PS I+N   L  L+ + C +L++ P+  +      +NF YC  L  FP+IS 
Sbjct: 661 NCKSLVELPSFIRNLNKLLKLNMEFCNNLKTLPTGFNLKSLGLLNFRYCSELRTFPEIST 720

Query: 493 KVTRLYLGQSAIEEVPSS--IECLTDLEV----LDLRGCKRLKRISTSFCKLRSLVTLIL 546
            ++ LYL  + IEE+PS+  +E L +L +     D +  + +K ++     L   +T   
Sbjct: 721 NISDLYLTGTNIEELPSNLHLENLVELSISKEESDGKQWEGVKPLTPLLAMLSPTLT--- 777

Query: 547 LGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNI 606
              L+L++ P ++                 ELPSSF+NL  LE L + +C  L+ LP  I
Sbjct: 778 --SLHLQNIPSLV-----------------ELPSSFQNLNNLESLDITNCRNLETLPTGI 818

Query: 607 GSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHIS 666
            +L+ LY                       SL    C  L SFP       + +  L++ 
Sbjct: 819 -NLQSLY-----------------------SLSFKGCSRLRSFPEIS----TNISSLNLD 850

Query: 667 DYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDF 714
           +  + E+P  I   S+L +  LS +    L  +   +S+L+ +   DF
Sbjct: 851 ETGIEEVPWWIENFSNLGL--LSMDRCSRLKCVSLHISKLKHLGKVDF 896



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 99/414 (23%), Positives = 173/414 (41%), Gaps = 111/414 (26%)

Query: 599  LDNLPD-----NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF 653
            L  +PD     N+ +LE     L    ++ +LPS +   N L  L+   C  L++ P  F
Sbjct: 642  LKEIPDLSMATNLETLE-----LGNCKSLVELPSFIRNLNKLLKLNMEFCNNLKTLPTGF 696

Query: 654  LLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILYLSGNNFESLPA-----------IIK 701
               L ++GLL+    + +R  P+    +S L   YL+G N E LP+           I K
Sbjct: 697  --NLKSLGLLNFRYCSELRTFPEISTNISDL---YLTGTNIEELPSNLHLENLVELSISK 751

Query: 702  QMSQ--------------------LRFIHLEDFNMLQSLPELPLC------LKYLHLIDC 735
            + S                     L  +HL++   + SL ELP        L+ L + +C
Sbjct: 752  EESDGKQWEGVKPLTPLLAMLSPTLTSLHLQN---IPSLVELPSSFQNLNNLESLDITNC 808

Query: 736  KMLQSLP--VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQ-- 791
            + L++LP  +    L SL   GC+ LRS PE+   +  LNL++      + E+P  ++  
Sbjct: 809  RNLETLPTGINLQSLYSLSFKGCSRLRSFPEISTNISSLNLDET----GIEEVPWWIENF 864

Query: 792  ----LLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSP-DLQWAP------ESLKSAA 840
                LL++  C+RL+ +   +  L+ L     +   + +  DL   P      E++K  A
Sbjct: 865  SNLGLLSMDRCSRLKCVSLHISKLKHLGKVDFKDCGELTRVDLSGYPSGMEEMEAVKIDA 924

Query: 841  IC---FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVL 897
            +     +F +C  L+ +    +L    +  ++M                         +L
Sbjct: 925  VSKVKLDFRDCFNLDPET---VLHQESIVFKYM-------------------------LL 956

Query: 898  PGSEIPDWFSNQSSG-SSICIQLPP----HSSCRNLIGFAFCAVLDSKKVDSDC 946
            PG ++P +F+ +++G SS+ I L P    H   R  +G     V+  K ++  C
Sbjct: 957  PGEQVPSYFTYRTTGVSSLTIPLLPTHLSHPFFRFRVGAVVTNVIHGKNMEVKC 1010


>gi|297805930|ref|XP_002870849.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316685|gb|EFH47108.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1225

 Score =  281 bits (718), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 225/754 (29%), Positives = 369/754 (48%), Gaps = 129/754 (17%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG--------NSETAGGLE 55
            SD V+++GIWG  GIGKTT+A+ ++ QFS  FE S F+ +++         + E +  ++
Sbjct: 432  SDEVRMIGIWGPSGIGKTTIARVLYSQFSENFELSIFMENIKELMYTRPVCSDEYSAKIQ 491

Query: 56   HLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF 113
             LQ+Q LS  ++ K       +PH    ++R+   ++LIVLD +++  QL  +  E   F
Sbjct: 492  -LQQQFLSQIINHK----DMELPHLGVAQDRLNDKRVLIVLDSIDQSIQLDAIAKETRWF 546

Query: 114  GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP---EDLNW 170
            G GSRI++TT+D+R+L K  G    IY+V      EA++ FC +AF +N      E+L W
Sbjct: 547  GHGSRIIITTQDQRLL-KAHGI-NHIYKVEFPSAYEAYQIFCMYAFGQNFPKDGFEELAW 604

Query: 171  HSRSVVSYTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNK 229
                 V+   GN PL L V+GS      +  W   L  L    ++ I  I   LK S++ 
Sbjct: 605  Q----VTKLLGNLPLGLRVMGSHFRGMSRHEWVNALPRLKIRLDASIQSI---LKFSYDA 657

Query: 230  LTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI---SGNF--L 281
            L    K +FL IAC F  E+   V   L  S  DV   L +L +KSL+++   S ++  +
Sbjct: 658  LCDEDKDLFLHIACLFNDEEMVRVEDYLASSFLDVRQGLHLLAEKSLIALKILSADYTRI 717

Query: 282  NMHDILQEMGRQIVRQESE----KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK 337
             MH++L ++GR IVR +      +EPGKR  L D ++I  VL  N  +  + GI L++  
Sbjct: 718  KMHNLLVQLGRDIVRHKPGHQCIREPGKRQFLVDARDIREVLTDNTDSRNVIGILLEVRN 777

Query: 338  IKG-INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKK 396
            + G +N++ RAF  +SNL+  +F     Y+ E             +K+ LP GL+ LP+K
Sbjct: 778  LSGELNINERAFEGLSNLKFLRF--RGLYDGEN------------NKLYLPQGLNNLPQK 823

Query: 397  LRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK------------------- 437
            LR L W  + ++ LPSNF  K LV +++  SK++  W+G +                   
Sbjct: 824  LRILEWSCFQMKCLPSNFCTKYLVHIDMWNSKLQNLWQGNQPLGNLKRMYLAESKHLKEL 883

Query: 438  --------------------ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
                                A +PSS+ N + L ALS +GC +L + P+N++      ++
Sbjct: 884  PNLSTATNLEKLTLFGCSSLAELPSSLGNLQKLQALSLRGCLNLEALPTNINLESLDYLD 943

Query: 478  FSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
             + C+ +  FP+IS  + RLYL ++A++EVPS+I+  +            L+++  S+  
Sbjct: 944  LTDCLLIKSFPEISTNIKRLYLMKTAVKEVPSTIKSWS-----------HLRKLEMSYND 992

Query: 538  LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS 597
                         NL+ FP   +    + ++Y +   I E+P   + +  L+ L +E C 
Sbjct: 993  -------------NLKEFPHAFDI---ITKLYFNDVKIQEIPLWVKKISRLQTLVLEGCK 1036

Query: 598  KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGL 657
            +L  LP    SL  +Y  +    ++ +L  S   ++  RS    +C  L    R F+   
Sbjct: 1037 RLVTLPQLSDSLSQIY--VENCESLERLDFSFH-NHPERSATLVNCFKLNKEAREFIQTN 1093

Query: 658  SAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN 691
            S   LL       RE+P    Y ++  I+ ++ N
Sbjct: 1094 STFALL-----PAREVPANFTYRANGSIIMVNLN 1122



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 160/398 (40%), Gaps = 61/398 (15%)

Query: 561  KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAAS 620
            K    + +Y        LP    NLP    +    C ++  LP N  + +YL +I    S
Sbjct: 796  KFLRFRGLYDGENNKLYLPQGLNNLPQKLRILEWSCFQMKCLPSNFCT-KYLVHIDMWNS 854

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPR-TFLLGLSAMGLLHISDYAVREIPQEIAY 679
             +  L         L+ +  +  K L+  P  +    L  + L   S  A  E+P  +  
Sbjct: 855  KLQNLWQGNQPLGNLKRMYLAESKHLKELPNLSTATNLEKLTLFGCSSLA--ELPSSLGN 912

Query: 680  LSSLEILYLSGN-NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
            L  L+ L L G  N E+LP  I  +  L ++ L D  +++S PE+   +K L+L+   + 
Sbjct: 913  LQKLQALSLRGCLNLEALPTNI-NLESLDYLDLTDCLLIKSFPEISTNIKRLYLMKTAVK 971

Query: 739  QSLPVLPFC--LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLC------L 790
            +    +     L  L+++  + L+  P     +  L   D      + E+PL       L
Sbjct: 972  EVPSTIKSWSHLRKLEMSYNDNLKEFPHAFDIITKLYFNDV----KIQEIPLWVKKISRL 1027

Query: 791  QLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLK 850
            Q L +  C RL +LP++   L ++     E L +        PE  +SA +     NC K
Sbjct: 1028 QTLVLEGCKRLVTLPQLSDSLSQIYVENCESLERLDFSFHNHPE--RSATL----VNCFK 1081

Query: 851  LNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQS 910
            LN +A   I  +S                             +  +LP  E+P  F+ ++
Sbjct: 1082 LNKEAREFIQTNS-----------------------------TFALLPAREVPANFTYRA 1112

Query: 911  SGSSICIQL---PPHSSCRNLIGFAFCAVLDSKKVDSD 945
            +GS I + L   P  ++ R    F  C +LD KKVD+D
Sbjct: 1113 NGSIIMVNLNQRPLSTTLR----FKACVLLD-KKVDND 1145


>gi|295083321|gb|ADF78114.1| rj2 protein [Glycine max]
          Length = 1052

 Score =  281 bits (718), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 257/796 (32%), Positives = 372/796 (46%), Gaps = 120/796 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V ++GI G+GGIGK+TLA A+++  +  F+GSCF+ D+R  S   G L+HLQ  
Sbjct: 205 VESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREKSNKKG-LQHLQSI 263

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +L   L EK      +E     I H    R++R K+L++LDDV++  QL+ ++G    FG
Sbjct: 264 LLREILGEKEINLASVEQGASIIQH----RLQRKKVLLILDDVDKHEQLQAIVGRPCWFG 319

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK++L       K+ Y V  L    A +     +FK              
Sbjct: 320 PGSRVIITTRDKQLLASHG--VKRTYEVELLNENNALQLLTWKSFKTEKVDPSYKEVLND 377

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV Y  G PL LEV+GS+L  K    W   +    RI   +I    +ILK+SF+ L    
Sbjct: 378 VVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQI---LEILKVSFDALEEEQ 434

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNF------LNMH 284
           K++FLDIAC F   D   V  IL     D +     +L++KSL+    ++      + MH
Sbjct: 435 KNVFLDIACCFNRYDLTKVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPRVTMH 494

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG---- 340
           D++++MG++IVRQES KEP KRSRLW P++I  VL+ N+GT  IE I LD          
Sbjct: 495 DLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKEEIV 554

Query: 341 INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYL 400
           + L+ +AF  M NL+       KF                        G  YLP  LR L
Sbjct: 555 VELNTKAFKKMKNLKTLIIRNGKF----------------------SKGPKYLPNNLRVL 592

Query: 401 HWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSS-----IQNFKYLSALSF 455
            W  YP   LPS+F PK L    L  S           C+ S       + F  L  L+F
Sbjct: 593 EWWRYPSHCLPSDFHPKKLAICKLPFS-----------CISSFELDGLWKMFVNLRILNF 641

Query: 456 KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT 515
             C+ L   P           +F  C NLI                     V +SI  L 
Sbjct: 642 DRCEGLTQIPDVSGLPNLEEFSFECCFNLI--------------------TVHNSIGFLD 681

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
            L++L+   CKRL+       KL SL  L L  C +LE FP+IL KME+++++    + I
Sbjct: 682 KLKILNAFRCKRLRSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSI 739

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
           TELP SF+NL GL                    LE L+    +   I ++PSS+ L   L
Sbjct: 740 TELPFSFQNLAGLR------------------GLELLFL---SPHTIFKVPSSIVLMPEL 778

Query: 636 RSLDSSHCKGL------ESFPRTFLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILY 687
             + +   KG       E   +T  +  S + +L +S   + +     +  + + ++ L 
Sbjct: 779 TVIRALGLKGWQWLKQEEGEEKTGSIVSSMVEMLTVSSCNLCDEFFSIDFTWFAHMKELC 838

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC 747
           LS NNF  LP  IK+   LR + +     L+ +  +P  LK+   I+CK L S  +  F 
Sbjct: 839 LSENNFTILPECIKECQFLRKLDVCGCKHLREIRGIPPNLKHFFAINCKSLTSSSIRKFL 898

Query: 748 LESLDLTGCNMLRSLP 763
            + L   G N +  LP
Sbjct: 899 NQELHEAG-NTVFCLP 913



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 146/349 (41%), Gaps = 73/349 (20%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +T++P     LP LE    E C  L  + ++IG L+ L  + A      +    + L++ 
Sbjct: 647 LTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPIKLTS- 704

Query: 635 LRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIP---QEIAYLSSLEILYLSG 690
           L  L+ S C  LESFP+  +LG +  +  L +S+ ++ E+P   Q +A L  LE+L+LS 
Sbjct: 705 LEKLNLSFCYSLESFPK--ILGKMENIRQLCLSESSITELPFSFQNLAGLRGLELLFLSP 762

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLES 750
           +    +P+ I  M +L  I        Q L +           +    ++  ++   +E 
Sbjct: 763 HTIFKVPSSIVLMPELTVIRALGLKGWQWLKQ-----------EEGEEKTGSIVSSMVEM 811

Query: 751 LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
           L ++ CN         LC ++ ++ D      + EL L     T+        LPE   C
Sbjct: 812 LTVSSCN---------LCDEFFSI-DFTWFAHMKELCLSENNFTI--------LPE---C 850

Query: 811 LQELDASVLEKLS----KHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLR 866
           ++E     L KL     KH  +++  P +LK     F   NC  L   +  K L      
Sbjct: 851 IKE--CQFLRKLDVCGCKHLREIRGIPPNLKH----FFAINCKSLTSSSIRKFL------ 898

Query: 867 IRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSI 915
                            N++L E   ++  LPG  IP+WF  QS G SI
Sbjct: 899 -----------------NQELHEAGNTVFCLPGKRIPEWFDQQSRGPSI 930


>gi|238481459|ref|NP_001154757.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007336|gb|AED94719.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1114

 Score =  281 bits (718), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 219/652 (33%), Positives = 321/652 (49%), Gaps = 98/652 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFD-QFSHEFEGSCFVSDVRGNSETAGGLEH-----L 57
           SD V+++GIWG  GIGKTT+A+A+FD + S  F+  CF+ +++G+    G  +H     L
Sbjct: 194 SDEVKMIGIWGPAGIGKTTIARALFDDRLSSSFQHKCFMGNLKGS--IKGVADHDSKLRL 251

Query: 58  QKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           QKQ+LS    E+       I H    +ER+   ++LI+LDDV+++ QL+ L  E+  FG 
Sbjct: 252 QKQLLSKIFKEE----NMKIHHLGAIRERLHDQRVLIILDDVDDLKQLEVLAKEISWFGS 307

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           GSRI+ TT DK++L K  G    IYRV+    ++A E  C  AFK++  P+     +  V
Sbjct: 308 GSRIIGTTEDKKIL-KAHGIHN-IYRVDFPSKKDALEILCLSAFKQSSIPDGFEELANKV 365

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
                  PL L V+G+SL  +    W ++L   +RI  S   DI DIL+I +++L    K
Sbjct: 366 AKLCSNLPLGLCVVGASLRGEGNQEWERLL---SRIESSLDRDIDDILRIGYDRLLTNDK 422

Query: 236 SIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGR 292
           S+FL IACFF     D V ++L DS  DV    + L D+SLV IS  + +   +L +   
Sbjct: 423 SLFLHIACFFNYAKVDNVTALLADSNLDVGNGFNTLADRSLVRIS-TYDDGISVLSDSNL 481

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
            IV ++S KEPGKR  + +P+EI  VL +  GT ++ GI  D S I  +++   AF  M 
Sbjct: 482 DIVLEQS-KEPGKREFIIEPEEIRDVLTNETGTGSVIGISFDTSNIGEVSVSKDAFEGMR 540

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NLR  + Y     E+                +Q+P  +DY+P+ LR L+WD YP ++LP 
Sbjct: 541 NLRFLRIYRLLGGEV---------------TLQIPEDMDYIPR-LRLLYWDRYPRKSLPR 584

Query: 413 NFKPKNLVELNLRCSKVEQPWEG------------------------EKAC--------- 439
            FKP+ LVEL++  S +E  W G                         KA          
Sbjct: 585 RFKPERLVELHMPRSNLELLWGGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLES 644

Query: 440 ------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
                 +PSSI N   L  L  K C  L+  P+N++      ++ S C  L  FP IS  
Sbjct: 645 CLSLVELPSSISNLHKLEILDVKFCSMLQVIPTNINLASLERLDVSGCSRLRTFPDISSN 704

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDL--RGCKRLKRISTSFCKLRSLVTLILLGCLN 551
           +  L  G   IE+VP S+ C + L+ L +  R  KRL  +          +TL+ L    
Sbjct: 705 IKTLIFGNIKIEDVPPSVGCWSRLDQLHISSRSLKRLMHVPPC-------ITLLSLRGSG 757

Query: 552 LEHFPEILEKMEHLKRIYSDR----TPITELPSSFENLPGLEVLFVEDCSKL 599
           +E   + +  +  L  +  D       I  LPSS      L+VL   DC  L
Sbjct: 758 IERITDCVIGLTRLHWLNVDSCRKLKSILGLPSS------LKVLDANDCVSL 803



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 158/416 (37%), Gaps = 121/416 (29%)

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF--------------- 582
           LR L    LLG       PE ++ +  L+ +Y DR P   LP  F               
Sbjct: 542 LRFLRIYRLLGGEVTLQIPEDMDYIPRLRLLYWDRYPRKSLPRRFKPERLVELHMPRSNL 601

Query: 583 -------ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
                  E LP L+++ +    +L  +P+   +       L +  ++ +LPSS++  + L
Sbjct: 602 ELLWGGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLESCLSLVELPSSISNLHKL 661

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFE 694
             LD   C  L+  P                             L+SLE L +SG +   
Sbjct: 662 EILDVKFCSMLQVIPTNI-------------------------NLASLERLDVSGCSRLR 696

Query: 695 SLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC---LKYLHLIDCKMLQSLPVLPFCLESL 751
           + P I   +  L F +++    ++ +P    C   L  LH I  + L+ L  +P C+  L
Sbjct: 697 TFPDISSNIKTLIFGNIK----IEDVPPSVGCWSRLDQLH-ISSRSLKRLMHVPPCITLL 751

Query: 752 DLTGCNMLRSLPELPLC------LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLP 805
            L G  + R    +  C      L +LN++ C  L+S+  LP  L++L   +C  L+ + 
Sbjct: 752 SLRGSGIER----ITDCVIGLTRLHWLNVDSCRKLKSILGLPSSLKVLDANDCVSLKRV- 806

Query: 806 EILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLL 865
                          + S H+P                +F NCLKL+ +A   I+  S+ 
Sbjct: 807 ---------------RFSFHNP------------MHTLDFNNCLKLDEEAKRGIIQRSVS 839

Query: 866 RIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
           R                            I LP  +IP+ F+++++G SI I L P
Sbjct: 840 R---------------------------YICLPCKKIPEEFTHKATGKSITIPLAP 868


>gi|356506541|ref|XP_003522038.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 913

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 214/597 (35%), Positives = 308/597 (51%), Gaps = 60/597 (10%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPN-IP 78
           KTT+A+ I ++    ++G CF  +V+      G +  L++   ST L E +++   N +P
Sbjct: 272 KTTIAQEILNKLCSGYDGYCFFVNVKEEIRRHGIIT-LKEIFFSTLLQENVKMITANGLP 330

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
           ++ K ++ RMK+LIVLDDVN+   L++L G  D FG GSRI++TTRDK+VL   +     
Sbjct: 331 NYIKRKIGRMKVLIVLDDVNDSDLLEKLFGNHDWFGPGSRIILTTRDKQVLIANKVHVDD 390

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY+V  L   EA E F   AF + H   +    S+ VV Y KG PLVL+VLG  LC K K
Sbjct: 391 IYQVGVLNPSEALELFILHAFNQKHFDMEYYKLSKRVVCYAKGIPLVLKVLGGLLCGKDK 450

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGED--KDFVASI 256
             W   L  L  +  +   D+Y+ +++S++ L  + + IFLD+ACFF G D   D +  +
Sbjct: 451 EVWESQLDKLKNMPNT---DVYNAMRLSYDDLDRKEQKIFLDLACFFIGLDVKVDLIKVL 507

Query: 257 LDDSESD-----VLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESEKEPGKRSRLW 310
           L D+E D      L+ L DKSL++IS  N + MHDI+QEMG +IVRQES ++PG RSRLW
Sbjct: 508 LKDNERDNSVVVGLERLKDKSLITISKYNIVYMHDIIQEMGWEIVRQESIEDPGSRSRLW 567

Query: 311 DPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
           D  +I  VLK+NKGT++I  I  DLS I+ + L P  FT MS L+   F           
Sbjct: 568 DADDIYEVLKNNKGTESIRSIRADLSAIRELKLSPDTFTKMSKLQFLYF----------- 616

Query: 371 PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
           P     +         P+ L     +LRY  W  +PL++LP NF  KNLV L+L  S+VE
Sbjct: 617 PHQGCVD-------NFPHRLQSFSVELRYFVWRYFPLKSLPENFSAKNLVLLDLSYSRVE 669

Query: 431 QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIE-FPQ 489
           + W+G        +QN K L  +   G ++L+  P+         ++ S C  L    P 
Sbjct: 670 KLWDG--------VQNLKNLKEVKVSGSKNLKELPNLSEATNLEVLDISACPQLASVIPS 721

Query: 490 ISG----KVTRL---YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLV 542
           I      K+ +L      Q  I+   SSI   T      L+G  + K       KL S+ 
Sbjct: 722 IFSLNKLKIMKLNYQSFTQMIIDNHTSSISFFT------LQGSTKQK-------KLISVT 768

Query: 543 TLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
           +  L+ C+  +  P        L+      + +  LPSSF NL     L V D  +L
Sbjct: 769 SEELISCVCYKEKPSSFVCQSKLEMFRITESDMGRLPSSFMNLRRQRYLRVLDPREL 825


>gi|449526134|ref|XP_004170069.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like
            [Cucumis sativus]
          Length = 1195

 Score =  280 bits (717), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 312/1006 (31%), Positives = 478/1006 (47%), Gaps = 159/1006 (15%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S + V +VGI GMGGIGKTTLAKA++++ +++FE  CF+S+VR  SE   GL  LQ+++L
Sbjct: 218  SDNGVNMVGIHGMGGIGKTTLAKALYNKITYQFEACCFLSNVRETSEQFNGLVQLQEKLL 277

Query: 63   STTLSE-KLEV----AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            +    +  L+V     G NI    K+R+   K+L+VLDDV++  QL  L+G  D FG+GS
Sbjct: 278  NEIFKDNNLKVDNVDKGMNI---IKDRLCSRKVLMVLDDVDKDDQLDALVGGRDXFGRGS 334

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            +I+VTTRD+ +LE +  +  KI+ +  L+ +++ E FC  AFK++H P         +V 
Sbjct: 335  KIIVTTRDRHLLETYSFD--KIHPIQLLDCDKSLELFCWHAFKQSH-PSRNYSELPELVR 391

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL--TPRVK 235
            Y  G PL L +LGS LC + +  W   L +L    E  I  ++   +ISF +L   P VK
Sbjct: 392  YCNGLPLALVILGSLLCKRDQIIWKSKLDELKNFPEPGIEAVF---QISFKRLPENPPVK 448

Query: 236  SIFLDIACFFEGEDKDFVASILDDS----ESDVLDILIDKSLVSISGNFLNMHDILQEMG 291
             IFLDI CFF GED  +  ++L       ES ++ IL+D SLV++    + MHD++++MG
Sbjct: 449  EIFLDICCFFVGEDVSYSKNVLKACDPYLESRII-ILMDLSLVTVEDGKIQMHDLIRQMG 507

Query: 292  RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
            + IVR++S K   KRSRLW  KE  ++L    GT  ++ I LDL     + ++  AF NM
Sbjct: 508  QMIVRRKSFKXR-KRSRLWVAKEAVKMLIEKSGTHKVKAIKLDLRNNGSLIVEAEAFRNM 566

Query: 352  SNLRL-------------FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLP---- 394
             NLRL             FK Y+P    IE   S S       S V +  GL  L     
Sbjct: 567  ENLRLLILQNAAKLPTNIFK-YLPNIKWIE-YSSSSVRWYFPISFV-VNGGLVGLVINGV 623

Query: 395  ------------KKLRYLHWDTYPLRTLPSNFKPK-NLVELN-LRCSKVEQPWEGEKACV 440
                        K L+++    + L     +F    NL +L  L C +++         +
Sbjct: 624  SNKHPGIIFEDCKMLKHVDLSYWRLLEETPDFSAALNLEKLYLLSCKRLKM--------I 675

Query: 441  PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI-NFSYCVNLIEFPQISG--KVTRL 497
              S+ +   L  L  +GC++L   PS+   +  + + N S C+ L E P +S    +  L
Sbjct: 676  HGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKLKEIPDLSASSNLKEL 735

Query: 498  YLGQS---AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
            +L +     I    +    L  L +LDL GCK L+R+ TS  K  SL  L L  C NL+ 
Sbjct: 736  HLRECYHLRIIHDSAVGRFLDKLVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKE 795

Query: 555  FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
                                     + F     LE+  +  C  L  +  ++GSL+ L  
Sbjct: 796  I------------------------TDFSIASNLEIFDLRGCFSLRTIHKSVGSLDQLIA 831

Query: 615  I-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
            + L     + +LPS + L + L SL  ++C  +E  P  F   + ++  +++   A+R++
Sbjct: 832  LKLDFCHQLEELPSCLRLKS-LDSLSLTNCYKIEQLPE-FDENMKSLREMNLKGTAIRKL 889

Query: 674  PQEIAYLSSLEILYLS-GNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
            P  I YL  LE L LS   N  SLP+ I  +  L+ + L + + L  LP        L+ 
Sbjct: 890  PTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLKELDLRECSRLDMLPSGS----SLNF 945

Query: 733  IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELP--LCL 790
                +  +L +L   L++ +++  + L +L      L+ LNL   N    LP L     L
Sbjct: 946  PQRSLCSNLTILD--LQNCNISNSDFLENLSNFCTTLKELNLSG-NKFCCLPSLKNFTSL 1002

Query: 791  QLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLK 850
            +LL +RNC  L+++ +I  CL+ +DAS  E L   SPD                      
Sbjct: 1003 RLLELRNCKFLRNIVKIPHCLKRMDASGCELLVI-SPDY--------------------- 1040

Query: 851  LNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQS 910
                     +AD + R + +               KL   +  LIV   SEIP + +NQ+
Sbjct: 1041 ---------IADMMFRNQDL---------------KLRNFKRELIV-TYSEIPKFCNNQT 1075

Query: 911  SGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCF-RYFYVSFQ 955
            + SSI      H+S   +     C V    KVD+D F    ++ FQ
Sbjct: 1076 TESSISFSF-QHNSDMIIPALVVCVVF---KVDADSFVAEAFIHFQ 1117


>gi|356560709|ref|XP_003548631.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1067

 Score =  280 bits (716), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 211/648 (32%), Positives = 326/648 (50%), Gaps = 72/648 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSET-AGGLEHLQKQML 62
           SDT  +VGIWGMGG+GKTT+AK I+++    F  S F+ ++R   E  + G   LQ+Q++
Sbjct: 206 SDTGCVVGIWGMGGLGKTTMAKVIYNKIHRRFRHSSFIENIREVCENDSRGCFFLQQQLV 265

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
           S  L+ ++   G  I    K+   R + LIVLDDV +V QLK L    +  G G   ++T
Sbjct: 266 SDILNIRV---GMGIIGIEKKLFGR-RPLIVLDDVTDVKQLKALSLNREWTGTGCVFIIT 321

Query: 123 TRDKRVLEKFRGEEK-KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TRD R+L   +   +  + R+  ++  E+ E F   AF++ H  EDL   S  +V+Y  G
Sbjct: 322 TRDVRLLNVLKPYHRVHVCRIKEMDENESLELFSWHAFRQAHPREDLIKLSMDIVAYCGG 381

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL LEVLGS LC + K  W  VL  L +I   ++ +    L+IS++ L    K+IFLDI
Sbjct: 382 LPLALEVLGSYLCERTKEEWESVLAKLRKIPNDQVQEK---LRISYDDLDCEEKNIFLDI 438

Query: 242 ACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQ 297
             FF G+D+  V  IL   D  +++ + IL+++SL+ +   N + MH++L++MGR+IVRQ
Sbjct: 439 CFFFIGKDRVNVTEILKGCDLHAEIGITILVERSLIKLEKNNKIKMHNLLRDMGREIVRQ 498

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
            S +EP KRSRLW  +E+  +L  + GT AIEG+ L L +  G++ + +AF  M  LRL 
Sbjct: 499 SSLEEPEKRSRLWVHQEVLDLLLEHTGTKAIEGLALKLQRTSGLHFNTKAFEKMKKLRL- 557

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
                                L    VQL    +YL K LR+L    +PL+ +P N   +
Sbjct: 558 ---------------------LQLDHVQLVGDYEYLNKNLRWLCLQGFPLQHIPENLYQE 596

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
           NL+ + L+ S +   W+      P  +Q  K L                          N
Sbjct: 597 NLISIELKYSNIRLVWKE-----PQLLQRLKIL--------------------------N 625

Query: 478 FSYCVNLIEFPQISG--KVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            S+  NL+  P  S    + +L L     + EV  SI  L +L V++L  C  L  +   
Sbjct: 626 LSHSRNLMHTPDFSKLPNLAKLNLKDCPRLSEVHQSIGDLNNLLVINLMDCTSLSNLPRR 685

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
             +L+SL TLI  GC  ++   E + +ME L  + +  T + E+P S   L    ++++ 
Sbjct: 686 IYQLKSLQTLIFSGCSKIDMLEEDIVQMESLTTLIAKDTAVKEMPQSIVRLKN--IVYIS 743

Query: 595 DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSH 642
            C  L+ L  ++       ++   A+  S   S  ++S  L S+D  H
Sbjct: 744 LCG-LEGLARDVFPSLIWSWMSPTANLRSCTHSFGSMSTSLTSMDIHH 790



 Score = 47.0 bits (110), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 7/142 (4%)

Query: 556 PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
           P++L++++ L   +S     T     F  LP L  L ++DC +L  +  +IG L  L  I
Sbjct: 615 PQLLQRLKILNLSHSRNLMHT---PDFSKLPNLAKLNLKDCPRLSEVHQSIGDLNNLLVI 671

Query: 616 -LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP 674
            L   +++S LP  +     L++L  S C  ++      ++ + ++  L   D AV+E+P
Sbjct: 672 NLMDCTSLSNLPRRIYQLKSLQTLIFSGCSKIDMLEED-IVQMESLTTLIAKDTAVKEMP 730

Query: 675 QEIAYLSSLEILYLSGNNFESL 696
           Q I  L +  I+Y+S    E L
Sbjct: 731 QSIVRLKN--IVYISLCGLEGL 750


>gi|297805476|ref|XP_002870622.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316458|gb|EFH46881.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1127

 Score =  280 bits (716), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 219/651 (33%), Positives = 335/651 (51%), Gaps = 90/651 (13%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGL-EH-----L 57
           SD V+++GIWG  GIGK+T+A+A+ +Q S  F+  CF+ +++G+ ++  G+ EH     L
Sbjct: 235 SDEVKMIGIWGPAGIGKSTIARALDNQLSSSFQLKCFMGNLKGSLKSIVGVDEHDSKLWL 294

Query: 58  QKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           Q Q++S  L+++       I H    KER+   ++LI+LDDV+++  L+ L  EL  FG 
Sbjct: 295 QNQLMSKILNQE----NMKIHHLGAIKERLHDQRVLIILDDVDDLKILEVLAEELSWFGF 350

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           GSRI+VTT DK++L+     +  IY VN    E+A E  C  AFK++  P+     ++ V
Sbjct: 351 GSRIIVTTEDKKILKAHGIND--IYHVNFPSKEDALEILCLSAFKQSSVPDGFEEVAKKV 408

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
            +     PL L V+G SL  +RK  W      L+RI  S    I DIL+I F++L+ + +
Sbjct: 409 ANLCGKLPLGLCVVGKSLRGQRKHVWEL---QLSRIEASLDRKIEDILRIGFDRLSKKNQ 465

Query: 236 SIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLV--SISGNFLNMHDILQEM 290
           S+FL IACFF  E  D V ++L DS  DV   L+ L DKSLV  S SG+ + MH +LQ++
Sbjct: 466 SLFLHIACFFNNEVADDVTTLLSDSNLDVGNGLETLADKSLVRKSTSGHIV-MHHLLQQL 524

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
           GRQIV ++S+ EPGKR  L++  EI  VL    GT ++ GI  D S I  +++   AF  
Sbjct: 525 GRQIVHEQSD-EPGKRQFLFEADEICDVLSTETGTGSVIGISFDTSNIGEVSVGKGAFEG 583

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M NLR  + +   F                   +Q+P  L      LR LHW+ YP  +L
Sbjct: 584 MRNLRFLRIFRRWFG--------------GEGTLQIPEDL-DYLPLLRLLHWEFYPRTSL 628

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKAC------------------------------- 439
           P  F+P+ L+EL++  SK+++ W G ++                                
Sbjct: 629 PRRFQPERLMELHMPYSKIKKLWGGIQSLPNLKIIDLMFSRQLKEIPNLSNATNLEELTL 688

Query: 440 --------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS 491
                   +PSSI+N + L  L    C  L+  PSN++      +  + C  L  FP+IS
Sbjct: 689 EGCGSLVELPSSIKNLQKLKILDVGFCCMLQVIPSNINLASLKILTMNGCSRLRTFPEIS 748

Query: 492 GKVTRLYLGQSAIEEVPSSIE-CLTDLEVLDL--RGCKRLKRISTSFCKLRSLVTLILLG 548
             +  L LG + IE+VP S+  CL+ L+ L++     KRL  +          +T ++L 
Sbjct: 749 SNIKVLNLGDTDIEDVPPSVAGCLSRLDRLNICSSSLKRLTHVPL-------FITDLILN 801

Query: 549 CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
             ++E  P+ +  +  L+ +   R   T+L S     P L+VL   DC  L
Sbjct: 802 GSDIETIPDCVIGLTRLEWLSVKRC--TKLESIPGLPPSLKVLDANDCVSL 850



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 113/249 (45%), Gaps = 31/249 (12%)

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
           ++  L++  S I+++   I+ L +L+++DL   ++LK I  +     +L  L L GC +L
Sbjct: 636 RLMELHMPYSKIKKLWGGIQSLPNLKIIDLMFSRQLKEIP-NLSNATNLEELTLEGCGSL 694

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
                                   ELPSS +NL  L++L V  C  L  +P NI      
Sbjct: 695 -----------------------VELPSSIKNLQKLKILDVGFCCMLQVIPSNINLASLK 731

Query: 613 YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
              +   S +   P   +   +L   D+     +E  P +    LS +  L+I   +++ 
Sbjct: 732 ILTMNGCSRLRTFPEISSNIKVLNLGDTD----IEDVPPSVAGCLSRLDRLNICSSSLKR 787

Query: 673 IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
           +     +++ L    L+G++ E++P  +  +++L ++ ++    L+S+P LP  LK L  
Sbjct: 788 LTHVPLFITDL---ILNGSDIETIPDCVIGLTRLEWLSVKRCTKLESIPGLPPSLKVLDA 844

Query: 733 IDCKMLQSL 741
            DC  L+ +
Sbjct: 845 NDCVSLKRV 853



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 125/311 (40%), Gaps = 87/311 (27%)

Query: 663 LHISDYAVREIPQEIAYLSSLEILYLS-GNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP 721
           LH+    ++++   I  L +L+I+ L      + +P +    + L  + LE    L  LP
Sbjct: 640 LHMPYSKIKKLWGGIQSLPNLKIIDLMFSRQLKEIPNL-SNATNLEELTLEGCGSLVELP 698

Query: 722 ELPLCLKYLHLID---CKMLQSLP--VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLED 776
                L+ L ++D   C MLQ +P  +    L+ L + GC+ LR+ PE+   ++ LNL D
Sbjct: 699 SSIKNLQKLKILDVGFCCMLQVIPSNINLASLKILTMNGCSRLRTFPEISSNIKVLNLGD 758

Query: 777 CNM-----------------------LRSLPELPL-----------------C------L 790
            ++                       L+ L  +PL                 C      L
Sbjct: 759 TDIEDVPPSVAGCLSRLDRLNICSSSLKRLTHVPLFITDLILNGSDIETIPDCVIGLTRL 818

Query: 791 QLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLK 850
           + L+V+ C +L+S+P +   L+ LDA+    L +          S  +     +F+NCLK
Sbjct: 819 EWLSVKRCTKLESIPGLPPSLKVLDANDCVSLKR-------VRFSFHTPTNVLQFSNCLK 871

Query: 851 LNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQS 910
           L+ ++   I+  S+                              + LPG  IP  F++++
Sbjct: 872 LDKESRRGIIQKSIY---------------------------DYVCLPGKNIPADFTHKA 904

Query: 911 SGSSICIQLPP 921
           +G SI I L P
Sbjct: 905 TGRSITIPLAP 915


>gi|356561218|ref|XP_003548880.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1059

 Score =  280 bits (716), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 241/758 (31%), Positives = 358/758 (47%), Gaps = 94/758 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V +VGI G+  +GKTTLA A+++  + +FE SCF+++VR  S   G LE LQ  
Sbjct: 204 IESDDVVHMVGIHGLAAVGKTTLAVAVYNSIADQFEASCFLANVRETSNKIG-LEDLQSI 262

Query: 61  MLSTTLSEK---LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +LS T+ EK   L      IP   K ++++ K+L++LDDV+E  QL+ +IG  D FG+GS
Sbjct: 263 LLSKTVGEKKIKLTNWREGIP-IIKHKLKQKKVLLILDDVDEHKQLQAIIGNPDWFGRGS 321

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS--RSV 175
           R+++TTRD+ +L       K  Y+V  L  + A +     AF E     D ++H      
Sbjct: 322 RVIITTRDEHLLA--LHNVKITYKVKELNEKHALQLLTQKAF-ELEKEVDPSYHDILNRA 378

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           V+Y  G PL LEV+GS+L  K    W   L+   RI + +I   Y ILK+S++ L    K
Sbjct: 379 VTYASGLPLALEVIGSNLFEKSIEEWESALNGYERIPDIKI---YAILKVSYDALNEDEK 435

Query: 236 SIFLDIACFFE----GEDKDFVASILDDSESDVLDILIDKSLVSIS--GNFLNMHDILQE 289
           SIFLDIAC F+     E +D + +         + +L+ KSL++I      + +H+++++
Sbjct: 436 SIFLDIACCFKDYELAEVQDILYAHYGRCMKYHIGVLVKKSLINIHRLHKVIRLHNLIED 495

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAF 348
           MG++IVR+ES  EP KRSRLW   +I++VL+ NKGT  IE I ++ S   + +  D  AF
Sbjct: 496 MGKEIVRRESPTEPWKRSRLWFHDDINQVLQENKGTSKIEIICMNFSSFGEEVEWDGDAF 555

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M NL+        F                        G  +LP  LR L W   P +
Sbjct: 556 KKMKNLKTLIIKSDCF----------------------SKGPKHLPNTLRVLEWWRCPSQ 593

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
             P NF PK L    L  +             P   + F  L++L+   C SL   P   
Sbjct: 594 DWPHNFNPKQLAICKLPDNSFTS-----LGLAPLFEKKFVNLTSLNLSMCDSLTEIPDVS 648

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
                  ++F+ C NL                      +  S+  L  L++LD  GC+ L
Sbjct: 649 CLSKLEKLSFARCRNLF--------------------TIHHSVGLLEKLKILDAEGCREL 688

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
           K       KL SL    L  C++LE FPEIL KME++  +     PIT+LP SF NL  L
Sbjct: 689 KSFPP--LKLTSLERFELSYCVSLESFPEILGKMENITELGLIDCPITKLPPSFRNLTRL 746

Query: 589 EVLFV-EDCSKLDNLP-----DNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSH 642
           +VL++ ++  +L          NI  +  L+ +  AA    +LP  V        L S  
Sbjct: 747 QVLYLGQETYRLRGFDAATFISNICMMPELFRV-EAAQLQWRLPDDVL------KLTSVA 799

Query: 643 CKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
           C  ++     FL   +        D     +P   +   ++  L LS + F  +P  IK+
Sbjct: 800 CSSIQ-----FLCFANC-------DLGDELLPLIFSCFVNVINLDLSWSKFTVIPECIKE 847

Query: 703 MSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
              L  + L+  N LQ    +P  LK    I C  L S
Sbjct: 848 CRFLTILTLDFCNHLQEFRGIPPNLKKFSAIGCPALTS 885



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 102/426 (23%), Positives = 163/426 (38%), Gaps = 99/426 (23%)

Query: 534 SFCKLRSLVTLILLG-CLNL--EHFPEILEKMEHLKRIYSD--------RTPITELP-SS 581
           +F K+++L TLI+   C +   +H P  L  +E  +    D        +  I +LP +S
Sbjct: 554 AFKKMKNLKTLIIKSDCFSKGPKHLPNTLRVLEWWRCPSQDWPHNFNPKQLAICKLPDNS 613

Query: 582 FENLPGLEVLFVED-----------CSKLDNLPDN--IGSLEYLYYILAAASAISQLPSS 628
           F +L GL  LF +            C  L  +PD   +  LE L +  A    +  +  S
Sbjct: 614 FTSL-GLAPLFEKKFVNLTSLNLSMCDSLTEIPDVSCLSKLEKLSF--ARCRNLFTIHHS 670

Query: 629 VALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYL 688
           V L   L+ LD+  C+ L+SFP   L  L                  E++Y  SLE    
Sbjct: 671 VGLLEKLKILDAEGCRELKSFPPLKLTSLERF---------------ELSYCVSLE---- 711

Query: 689 SGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCL 748
                 S P I+ +M  +  + L D  + +  P              + L  L VL    
Sbjct: 712 ------SFPEILGKMENITELGLIDCPITKLPPSF------------RNLTRLQVLYLGQ 753

Query: 749 ESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCL--------QLLTVRNCNR 800
           E+  L G +    +  + +  +   +E   +   LP+  L L        Q L   NC+ 
Sbjct: 754 ETYRLRGFDAATFISNICMMPELFRVEAAQLQWRLPDDVLKLTSVACSSIQFLCFANCDL 813

Query: 801 LQSL-PEILLCLQELDASVLEKLSKHSPDLQWA-----PESLKS----AAICFEFTNCLK 850
              L P I  C           ++  + DL W+     PE +K       +  +F N L+
Sbjct: 814 GDELLPLIFSCF----------VNVINLDLSWSKFTVIPECIKECRFLTILTLDFCNHLQ 863

Query: 851 LNGKANNKILADSLLRIRHMAIASL-RLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQ 909
                  + +  +L +   +   +L      M +N++L E   +   LP  EIP+WF  Q
Sbjct: 864 -----EFRGIPPNLKKFSAIGCPALTSSSISMLLNQELHEAGDTNFSLPRVEIPEWFECQ 918

Query: 910 SSGSSI 915
           S G SI
Sbjct: 919 SRGPSI 924


>gi|332330343|gb|AEE43929.1| TIR-NBS-LRR resistance protein muRdr1E [Rosa multiflora]
          Length = 1143

 Score =  280 bits (716), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 227/701 (32%), Positives = 345/701 (49%), Gaps = 107/701 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK----LEV-AG 74
           KTTLA+ ++ + SH+FE   F+ +VR  S+T  GL  LQK++LS    E+    L+V +G
Sbjct: 230 KTTLARLVYQKISHQFEVCIFLDNVREVSKTTHGLVDLQKKILSQIFKEENVQVLDVYSG 289

Query: 75  PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRG 134
             +    K  V    +L+VLDDV++  QL+ L+G  D FG  SRI++TTRD+ VL    G
Sbjct: 290 ITM---IKRCVCNKAVLLVLDDVDQSEQLENLVGGKDCFGLRSRIIITTRDRHVLVT-HG 345

Query: 135 EEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLC 194
            ++K Y + GL  +EA + FC  AF+     E      +S V+Y  G PL L++LGS L 
Sbjct: 346 VDQKPYELKGLNEDEALQLFCWKAFRNCKPEEYYAEPCKSFVTYAAGLPLALKILGSFLN 405

Query: 195 LKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVA 254
            +    W   L  L    ++    +++ILKISF+ L    K IFLDIACF      +F+ 
Sbjct: 406 GRTPGEWNSALAKLQ---QTPYRTVFEILKISFDGLDETEKKIFLDIACFRRLYRNEFMI 462

Query: 255 SILDDSES---DVLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESEKEPGKRSRLW 310
            ++D S+        +L +KSL++IS  N +++HD++ EMG +IVRQE+E EPG RSRL 
Sbjct: 463 ELVDSSDPCNCITRSVLAEKSLLTISSDNQVDVHDLIHEMGCEIVRQENE-EPGGRSRLC 521

Query: 311 DPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
              +I  V   N GT+AIEGI L L K++  + +   F+ M  L+L   +          
Sbjct: 522 LRDDIFHVFTKNTGTEAIEGILLHLDKLEEADWNLETFSKMCKLKLLYIH---------- 571

Query: 371 PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
                        ++L  G  +LP  LR+L W  YP ++LP  F+P  L EL+L  S ++
Sbjct: 572 ------------NLRLSVGPKFLPNALRFLSWSWYPSKSLPPCFQPDELTELSLVHSNID 619

Query: 431 QPWEGEK----------------------------------AC-----VPSSIQNFKYLS 451
             W G K                                   C     +  SI   K L 
Sbjct: 620 HLWNGIKYLVNLKSIDLSYSINLRRTPDFTGIPNLEKLVLEGCTNLVKIHPSIALLKRLK 679

Query: 452 ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR---LYLGQSAIEEVP 508
             +F+ C+S++S PS ++     T + S C  L + P+  G+  R   L LG +A+E++P
Sbjct: 680 IWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKKIPEFEGQTNRLSNLSLGGTAVEKLP 739

Query: 509 SSIECLTD-LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKR 567
           SSIE L++ L  LDL G    ++  + F K   +V+   L       FP    K  H   
Sbjct: 740 SSIEHLSESLVELDLSGIVIREQPYSLFLKQNLIVSSFGL-------FP---RKSPH--- 786

Query: 568 IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDN-LPDNIGSLEYLYYILAAASAISQLP 626
                 P+  L +  ++   L  L + DC+  +  +P++IGSL  L  +    +    LP
Sbjct: 787 ------PLIPLLAPLKHFSCLRTLKLNDCNLCEGEIPNDIGSLSSLRRLELGGNNFVSLP 840

Query: 627 SSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD 667
           +S+ L + L + +  +CK L+  P      LSA  +L  SD
Sbjct: 841 ASIYLLSKLTNFNVDNCKRLQQLPE-----LSAKDVLPRSD 876



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 167/408 (40%), Gaps = 53/408 (12%)

Query: 551 NLEHFPEILEKMEHLKRI---YS---DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
           N++H    ++ + +LK I   YS    RTP       F  +P LE L +E C+ L  +  
Sbjct: 617 NIDHLWNGIKYLVNLKSIDLSYSINLRRTP------DFTGIPNLEKLVLEGCTNLVKIHP 670

Query: 605 NIGSLEYL-YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLL 663
           +I  L+ L  +      +I  LPS V +   L + D S C  L+  P  F    + +  L
Sbjct: 671 SIALLKRLKIWNFRNCKSIKSLPSEVNME-FLETFDVSGCSKLKKIPE-FEGQTNRLSNL 728

Query: 664 HISDYAVREIPQEIAYLS-SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE 722
            +   AV ++P  I +LS SL  L LSG      P  +     L       F      P 
Sbjct: 729 SLGGTAVEKLPSSIEHLSESLVELDLSGIVIREQPYSLFLKQNLIVSSFGLFPRKSPHPL 788

Query: 723 LPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP------LCLQYLNLED 776
           +PL     H               CL +L L  CN+     E+P        L+ L L  
Sbjct: 789 IPLLAPLKHFS-------------CLRTLKLNDCNLCEG--EIPNDIGSLSSLRRLELGG 833

Query: 777 CNMLRSLPELPLCLQLLT---VRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAP 833
            N + SLP     L  LT   V NC RLQ LPE       L A  +   S +   LQ  P
Sbjct: 834 NNFV-SLPASIYLLSKLTNFNVDNCKRLQQLPE-------LSAKDVLPRSDNCTYLQLFP 885

Query: 834 ESLKSAAICFEF----TNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSE 889
           +      I   F     NCL + G  +      S+L+     ++   +   M    +   
Sbjct: 886 DPPDLCRITTNFWLNCVNCLSMVGNQDASYFLYSVLKRWIEVLSRCDMMVHMQETHR-RP 944

Query: 890 LRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
           L+   +V+PGSEIP+WF+NQS G  +  +LP        IGFA CA++
Sbjct: 945 LKSLELVIPGSEIPEWFNNQSVGDRVTEKLPSDECNSKCIGFAVCALI 992


>gi|224136171|ref|XP_002327398.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222835768|gb|EEE74203.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 722

 Score =  280 bits (715), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 204/598 (34%), Positives = 296/598 (49%), Gaps = 111/598 (18%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+ ++D+   +F GSCF+++VR       GL  LQ+Q+LS  +S +L  A  +   
Sbjct: 230 KTTVARVLYDRIRWQFGGSCFLANVREVFAEKDGLCRLQEQLLSE-ISMELPTARDSSRR 288

Query: 80  --FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
               K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+R+K VL+       
Sbjct: 289 IDLIKRRLRLKKVLLILDDVDDEEQLQMLAAEHGSFGPGSRIIITSRNKHVLDSH--GVT 346

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           +IY    L  ++A   F   AFK +   EDL+  S+ VV Y  G PL LEV+GS L  + 
Sbjct: 347 RIYEAEKLNDKDALLLFSWKAFKRDQPAEDLSELSKQVVGYANGLPLALEVIGSFLHKRG 406

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W   ++ +N I + +I    D+L+ISF+ L    K IFLDIACF +G  KD +  +L
Sbjct: 407 LREWKSAINRMNDIPDRKI---IDVLRISFDGLHELEKKIFLDIACFLKGMKKDRITRLL 463

Query: 258 DDS--ESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
           D     +D+ + +LI+KSL+ +S + + MH++LQ+MG +IVR ES +EPG+RSRL   K+
Sbjct: 464 DSCGFHADIGMQVLIEKSLIRVSRDEIWMHNLLQKMGEEIVRCESPEEPGRRSRLHTYKD 523

Query: 315 ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
           +S  LK + G   IE IFLDL K K    +  AF+ M+ LRL K +              
Sbjct: 524 VSDALKDSTGK--IESIFLDLPKAKEATWNMTAFSKMTKLRLLKIH-------------- 567

Query: 375 TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
                    V L  G +YL  +LR+L W  YP ++LP+ F+P  LVEL + CS++EQ W 
Sbjct: 568 --------NVDLSEGPEYLSNELRFLEWHAYPSKSLPACFRPDELVELYMSCSRIEQLWC 619

Query: 435 GEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
           G K  V     N K                           IN S  + LI  P  +G  
Sbjct: 620 GCKILV-----NLK--------------------------IINLSNSLYLINTPDFTG-- 646

Query: 495 TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
                              + +LE L L GC  L  +  SF + + L  + L+ C +L  
Sbjct: 647 -------------------IPNLESLILEGCASLSEVHPSFGRHKKLQLVNLVNCYSLRI 687

Query: 555 FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
            P  LE                        +  LEV  +  CSKLD  PD +G++  L
Sbjct: 688 LPSNLE------------------------MESLEVCTLSGCSKLDKFPDIVGNMNCL 721


>gi|295083313|gb|ADF78110.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  280 bits (715), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 253/796 (31%), Positives = 369/796 (46%), Gaps = 120/796 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V ++GI G+GGIGK+TLA A+++  +  F+GSCF+ D+R  S   G L+HLQ  
Sbjct: 205 VESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREKSNKKG-LQHLQSI 263

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +L   L EK      +E     I H    R++R K+L++LDDV++  QL+ ++G    FG
Sbjct: 264 LLREILGEKEINLASVEQGASIIQH----RLQRKKVLLILDDVDKHEQLQAIVGRPCWFG 319

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK++L       K+ Y V  L    A +     +FK              
Sbjct: 320 PGSRVIITTRDKQLLASHG--VKRTYEVELLNENNALQLLTWKSFKTEKVDPSYKEVLND 377

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV Y  G PL LEV+GS+L  K    W   +    RI   +I    +ILK+SF+ L    
Sbjct: 378 VVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQI---LEILKVSFDALEEEQ 434

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNF------LNMH 284
           K++FLDIAC F   D   V  IL     D +     +L++KSL+    ++      + MH
Sbjct: 435 KNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIVTMH 494

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG---- 340
           D++++MG++IVRQES KEP KRSRLW P++I  VL+ N+GT  IE I LD          
Sbjct: 495 DLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKEEIV 554

Query: 341 INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYL 400
           + L+ +AF  M NL+       KF                        G  YLP  LR L
Sbjct: 555 VELNTKAFKKMKNLKTLIIRNGKF----------------------SKGPKYLPNNLRVL 592

Query: 401 HWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPS-----SIQNFKYLSALSF 455
            W  YP   LPS+F PK L    L  S           C+ S       + F  L  L+F
Sbjct: 593 EWWRYPSHCLPSDFHPKKLAICKLPFS-----------CISSFELDGVWKMFVNLRILNF 641

Query: 456 KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT 515
             C+ L   P           +F  C NLI                     V +SI  L 
Sbjct: 642 DRCEGLTQIPDVSGLPNLEEFSFECCFNLI--------------------TVHNSIGFLD 681

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
            L++L+   CKRL+       KL SL  L L  C +LE FP+IL KME++++++   + I
Sbjct: 682 KLKILNAFRCKRLRSFPP--IKLTSLEKLNLSCCYSLESFPKILGKMENIRQLWLSESSI 739

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
           TELP SF+NL GL                    LE L+    +   I ++PSS+ L   L
Sbjct: 740 TELPFSFQNLAGLR------------------GLELLFL---SPHTIFKVPSSIVLMPEL 778

Query: 636 RSLDSSHCKGLESFPR--------TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
             + +   KG +   +        + +     M  + I + +      +  + + ++ L 
Sbjct: 779 TVIRALGLKGWQWLKQEEGEEKTGSIVSSKVEMLTVAICNLSDEFFSIDFTWFAHMKELC 838

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC 747
           LS NNF   P  IK+   L  + + D   L+ +  +P  LK+   I+CK L S  +  F 
Sbjct: 839 LSENNFTIPPECIKECQFLGKLDVCDCKHLREIRGIPPNLKHFFAINCKSLTSSSIRKFL 898

Query: 748 LESLDLTGCNMLRSLP 763
            + L   G N +  LP
Sbjct: 899 NQELHEAG-NTVFCLP 913



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 142/349 (40%), Gaps = 73/349 (20%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +T++P     LP LE    E C  L  + ++IG L+ L  + A      +    + L++ 
Sbjct: 647 LTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPIKLTS- 704

Query: 635 LRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIP---QEIAYLSSLEILYLSG 690
           L  L+ S C  LESFP+  +LG +  +  L +S+ ++ E+P   Q +A L  LE+L+LS 
Sbjct: 705 LEKLNLSCCYSLESFPK--ILGKMENIRQLWLSESSITELPFSFQNLAGLRGLELLFLSP 762

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLES 750
           +    +P+ I  M +L  I        Q L +     K   ++  K+           E 
Sbjct: 763 HTIFKVPSSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSKV-----------EM 811

Query: 751 LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
           L +  CN         L  ++ ++ D      + EL L     T+         PE   C
Sbjct: 812 LTVAICN---------LSDEFFSI-DFTWFAHMKELCLSENNFTIP--------PE---C 850

Query: 811 LQELDASVLEKLS----KHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLR 866
           ++E     L KL     KH  +++  P +LK     F   NC  L   +  K L      
Sbjct: 851 IKE--CQFLGKLDVCDCKHLREIRGIPPNLKH----FFAINCKSLTSSSIRKFL------ 898

Query: 867 IRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSI 915
                            N++L E   ++  LPG  IP+WF  QS G SI
Sbjct: 899 -----------------NQELHEAGNTVFCLPGKRIPEWFDQQSRGPSI 930


>gi|356560705|ref|XP_003548629.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1059

 Score =  280 bits (715), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 189/592 (31%), Positives = 308/592 (52%), Gaps = 68/592 (11%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG-GLEHLQKQMLSTT 65
           V ++GIWGMGG+GKT+ AK I++Q   +F    F+ D+R   +T G G   LQK++LS  
Sbjct: 228 VCMIGIWGMGGLGKTSTAKGIYNQIHRKFIDKSFIEDIREICQTEGRGHILLQKKLLSDV 287

Query: 66  LSEKLEVAGPNIPHFT-KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
           L  ++++    +   T KER+   ++L+VLDDVNE+GQ++ L G  + FGQG+ I++TTR
Sbjct: 288 LKTEVDILSVGMGKTTIKERLSGKRMLVVLDDVNELGQVEHLCGNREWFGQGTVIIITTR 347

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           D R+L++ + +   IY++  ++  E+ E F   AF      ED    +RSVV+Y  G PL
Sbjct: 348 DVRLLKQLKVDS--IYKLEEMDKNESLELFSWHAFGNAEPREDFKELARSVVAYCGGLPL 405

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSIFLDIAC 243
            L VLG+ L  + K  W  VL  L +I   ++      L+ISF+ L+ P  K IFLD+ C
Sbjct: 406 ALRVLGAYLIERPKQLWESVLSKLEKIPNDQVQKK---LRISFDGLSDPLEKDIFLDVCC 462

Query: 244 FFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQES 299
           FF G+D+ +V  IL+     +D+ + +L+++SL+ +   N L MH +L++MGR+I+ + S
Sbjct: 463 FFIGKDRGYVTEILNGCGLHADIGITVLLERSLIKVEKNNKLGMHPLLRDMGREIICESS 522

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
             +PGKRSRLW  K++  VL  N GT+ I G+ L L        +  AF  M +LRL   
Sbjct: 523 RNKPGKRSRLWFQKDVLDVLTKNTGTETIVGLALKLHYSSRDCFNAYAFKEMKSLRL--- 579

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
                              L    V +     YL K+LR++ W  +P + +P+NF  + +
Sbjct: 580 -------------------LQLDHVHITGDYQYLSKQLRWVCWQGFPSKYIPNNFNLEGV 620

Query: 420 VELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
           + ++L+ S +   W+      P  +Q  K L                          N S
Sbjct: 621 IAIDLKHSNLRLVWKK-----PQVLQWLKIL--------------------------NLS 649

Query: 480 YCVNLIEFPQISG--KVTRLYLGQS-AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFC 536
           +   L   P  SG   + +L L    ++ +V  SI  L  L +++++ C  L  +     
Sbjct: 650 HSKYLTATPNFSGLPSLEKLILKDCPSLSKVHKSIGDLHKLVLINMKDCTSLSNLPREMY 709

Query: 537 KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
           +L+S+ TL L GC  ++   E + +ME L  + ++ T + ++P S  +L  +
Sbjct: 710 QLKSVKTLNLSGCSKIDKLEEDIVQMESLTTLIAENTAVKQVPFSIVSLKSI 761


>gi|357499687|ref|XP_003620132.1| Resistance protein [Medicago truncatula]
 gi|355495147|gb|AES76350.1| Resistance protein [Medicago truncatula]
          Length = 1608

 Score =  280 bits (715), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 265/845 (31%), Positives = 410/845 (48%), Gaps = 111/845 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S DTV +VGI GMGGIGKTTLA ++++  +HEF+ SCF+ +VR N E   GL +LQ  
Sbjct: 198 IGSDDTVHMVGIHGMGGIGKTTLALSVYNLIAHEFDASCFLENVRENHEKH-GLPYLQNI 256

Query: 61  MLSTTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           +LS  + EK  + G        ++R+R+ KLL++LDDVNE  QLK L G+   FG  SRI
Sbjct: 257 ILSKVVGEKNALTGVRQGISILEQRLRQKKLLLILDDVNEQEQLKALAGKHKWFGPSSRI 316

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH------SR 173
           ++TTRDK++L     E    Y V GL  ++AFE     AFK+   P D N          
Sbjct: 317 IITTRDKKLLTCHGVEH--TYEVRGLNAKDAFELVRWKAFKDEFSPSDENVSLAQLHVIE 374

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            VV+Y  G+PL LEV+GS    K        L    ++   +I      L+ISF+ L   
Sbjct: 375 RVVAYASGHPLALEVMGSHFSNKTIEQCKDALDRYEKVPHKKIQ---TTLQISFDALEDE 431

Query: 234 VKSIFLDIACFFEGEDKDFVASILDDSESDV----LDILIDKSLVSIS--GNFLNMHDIL 287
            K +FLDIAC F+G     V  IL     ++    +++L++KSL+ I+  GN + +HD++
Sbjct: 432 EKFVFLDIACCFKGCKLTRVDEILHAHHGEIVKDHINVLVEKSLIKINEFGN-VTLHDLV 490

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA 347
           ++MG++IVRQES ++PGKR+RLW   +I +VL+ N  ++ +                   
Sbjct: 491 EDMGKEIVRQESPQDPGKRTRLWFSNDIMQVLEENTVSNNV------------------- 531

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
              M NL   +  + +F   +   +++ + +  + K        +LP  LR L       
Sbjct: 532 ---MDNLGTSQIEIIRF---DCWTTVAWDGEFFFKKSP-----KHLPNSLRVLECHNPSS 580

Query: 408 RTLPS----NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRS 463
             L +    NF  KN    N+R   +E    G       +I     L  LS K C  L +
Sbjct: 581 DFLVALSLLNFPTKNFQ--NMRVLNLEG---GSGLVQIPNISGLSNLEKLSIKNCWKLIA 635

Query: 464 FPSNLHFVCPVTI-NFSYCVNLIEFPQIS-GKVTRLYL-GQSAIEEVPSSIECLTD-LEV 519
              ++ F+  + I     C+ +   P +    +  L+L G +++E  P  ++   D L+ 
Sbjct: 636 IDKSVGFLGKLKILRLINCIEIQSIPPLMLASLVELHLSGCNSLESFPPVLDGFGDKLKT 695

Query: 520 LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP 579
           +++  CK L+ I     KL SL TL L  C +LE+FP +++                   
Sbjct: 696 MNVIYCKMLRSIPP--LKLNSLETLDLSQCYSLENFPLVVDAF----------------- 736

Query: 580 SSFENLPGLEVLFVEDCSKLDNLPD-NIGSLEYLYYILAAASAISQLPSSV-ALSNMLRS 637
                L  L+ L V+ C KL ++P   + SLE L   L+   ++   P  V A    L++
Sbjct: 737 -----LGKLKTLNVKGCCKLTSIPPLKLNSLETLD--LSQCYSLENFPLVVDAFLGKLKT 789

Query: 638 LDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI-AYLSSLEIL-YLSGNNFES 695
           L+   C  L+S     L  L  + L H   Y +   P  +  +L  L+ L +   +N +S
Sbjct: 790 LNVESCHNLKSIQPLKLDSLIYLNLSHC--YNLENFPSVVDEFLGKLKTLCFAKCHNLKS 847

Query: 696 LPAIIKQMSQLRFIHLEDFNMLQSLPELPLC------LKYLHLIDCKMLQSLPVLPF-CL 748
           +P +  +++ L  +     + L+S P  P+       LK L +  C  L+S+P L    L
Sbjct: 848 IPPL--KLNSLETLDFSSCHRLESFP--PVVDGFLGKLKTLLVRKCYNLKSIPPLKLDSL 903

Query: 749 ESLDLTGCNMLRSLP----ELPLCLQYLNLEDCNMLRSLPELPLC-LQLLTVRNCNRLQS 803
           E LDL+ C  L S P     L   L++LN+E C MLR++P L L  L+   +  C  L+S
Sbjct: 904 EKLDLSCCCSLESFPCVVDGLLDKLKFLNIECCIMLRNIPRLRLTSLEYFNLSCCYSLES 963

Query: 804 LPEIL 808
            PEIL
Sbjct: 964 FPEIL 968



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 166/391 (42%), Gaps = 75/391 (19%)

Query: 381  YSKVQLPNGLDYLPKKLRYLHWDT-YPLRTLPSNFKPKNLVELNL-RCSKVEQPWEGEKA 438
            YS    P  +D    KL+ L+ ++ + L+++    K  +L+ LNL  C  +E        
Sbjct: 771  YSLENFPLVVDAFLGKLKTLNVESCHNLKSIQP-LKLDSLIYLNLSHCYNLEN------- 822

Query: 439  CVPSSIQNF-KYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS----GK 493
              PS +  F   L  L F  C +L+S P  L      T++FS C  L  FP +     GK
Sbjct: 823  -FPSVVDEFLGKLKTLCFAKCHNLKSIPP-LKLNSLETLDFSSCHRLESFPPVVDGFLGK 880

Query: 494  VTRLYLGQS-----------------------AIEEVPSSIECLTD-LEVLDLRGCKRLK 529
            +  L + +                        ++E  P  ++ L D L+ L++  C  L+
Sbjct: 881  LKTLLVRKCYNLKSIPPLKLDSLEKLDLSCCCSLESFPCVVDGLLDKLKFLNIECCIMLR 940

Query: 530  RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
             I     +L SL    L  C +LE FPEIL +M ++  +  D TPI E+P  F+ L   +
Sbjct: 941  NIPR--LRLTSLEYFNLSCCYSLESFPEILGEMRNIPGLLKDDTPIKEIPFPFKTLTQPQ 998

Query: 590  VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
             L   DC  +  LP+ + +L                  ++     + ++ SSH K     
Sbjct: 999  TLC--DCGYV-YLPNRMSTLAKF---------------TIRNEEKVNAIQSSHVK----- 1035

Query: 650  PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
                      + + H+   +   + + +   ++++ L+L+ N+F  +P  I+    L  +
Sbjct: 1036 ---------YICVRHVGYRSEEYLSKSLMLFANVKELHLTSNHFTVIPKSIENCQFLWKL 1086

Query: 710  HLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
             L+D   L+ +  +P CL+ L  ++CK L S
Sbjct: 1087 ILDDCTALKEIKGIPPCLRMLSALNCKSLTS 1117



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 162/379 (42%), Gaps = 51/379 (13%)

Query: 450  LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS----GKVTRLYLGQ-SAI 504
            L  L+ + C +L+S    L     + +N S+C NL  FP +     GK+  L   +   +
Sbjct: 787  LKTLNVESCHNLKSIQP-LKLDSLIYLNLSHCYNLENFPSVVDEFLGKLKTLCFAKCHNL 845

Query: 505  EEVPSSIECLTDLEVLDLRGCKRLKR---ISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            + +P     L  LE LD   C RL+    +   F  L  L TL++  C NL+  P +  K
Sbjct: 846  KSIPPLK--LNSLETLDFSSCHRLESFPPVVDGF--LGKLKTLLVRKCYNLKSIPPL--K 899

Query: 562  MEHLKRI-YSDRTPITELPSSFENL-PGLEVLFVEDCSKLDNLPD-NIGSLEYLYYILAA 618
            ++ L+++  S    +   P   + L   L+ L +E C  L N+P   + SLEY       
Sbjct: 900  LDSLEKLDLSCCCSLESFPCVVDGLLDKLKFLNIECCIMLRNIPRLRLTSLEYF------ 953

Query: 619  ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIA 678
                                + S C  LESFP       +  GLL   D  ++EIP    
Sbjct: 954  --------------------NLSCCYSLESFPEILGEMRNIPGLLK-DDTPIKEIPFPFK 992

Query: 679  YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
             L+  + L   G  +  LP  +  +++    + E  N +QS     +C++++     + L
Sbjct: 993  TLTQPQTLCDCG--YVYLPNRMSTLAKFTIRNEEKVNAIQSSHVKYICVRHVGYRSEEYL 1050

Query: 739  QSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLN---LEDCNMLRSLPELPLCLQLLTV 795
                +L   ++ L LT  N    +P+     Q+L    L+DC  L+ +  +P CL++L+ 
Sbjct: 1051 SKSLMLFANVKELHLTS-NHFTVIPKSIENCQFLWKLILDDCTALKEIKGIPPCLRMLSA 1109

Query: 796  RNCNRLQSLPEILLCLQEL 814
             NC  L S  +  L  QEL
Sbjct: 1110 LNCKSLTSSCKSKLLNQEL 1128


>gi|295083329|gb|ADF78118.1| rj2 protein [Glycine max]
 gi|308171408|gb|ADO15998.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1052

 Score =  280 bits (715), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 258/799 (32%), Positives = 369/799 (46%), Gaps = 126/799 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V ++GI G+GGIGK+TLA A+++  +  F+GSCF+ D+R  S    GL+HLQ  
Sbjct: 205 VESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREKS-NKKGLQHLQSI 263

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +L   L EK      +E     I H    R++R K+L++LDDV++  QL+ ++G    FG
Sbjct: 264 LLREILGEKEINLASVEQGASIIQH----RLQRKKVLLILDDVDKHEQLQAIVGRPCWFG 319

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK++L       K+ Y V  L    A +     +FK              
Sbjct: 320 PGSRVIITTRDKQLLASHGV--KRTYEVELLNENNALQLLTWKSFKTEKVDPSYKEVLND 377

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV Y  G PL LEV+GS+L  K    W   +    RI   +I    +ILK+SF+ L    
Sbjct: 378 VVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQI---LEILKVSFDALEEEQ 434

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNF------LNMH 284
           K++FLDIAC F   D   V  IL     D +     +L++KSL+    ++      + MH
Sbjct: 435 KNVFLDIACCFNRYDLTKVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPRVTMH 494

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG---- 340
           D++++MG++IVRQES KEP KRSRLW P++I  VL+ N+GT  IE I LD          
Sbjct: 495 DLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKEEIV 554

Query: 341 INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYL 400
           + L+ +AF  M NL+       KF                        G  YLP  LR L
Sbjct: 555 VELNTKAFKKMKNLKTLIIRNGKF----------------------SKGPKYLPNNLRVL 592

Query: 401 HWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSS-----IQNFKYLSALSF 455
            W  YP   LPS+F PK L    L  S           C+ S       + F  L  L+F
Sbjct: 593 EWWRYPSHCLPSDFHPKKLAICKLPFS-----------CISSFELDGLWKMFVNLRILNF 641

Query: 456 KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT 515
             C+ L   P           +F  C NLI                     V +SI  L 
Sbjct: 642 DRCEGLTQIPDVSGLPNLEEFSFECCFNLI--------------------TVHNSIGFLD 681

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
            L++L+   CKRL+       KL SL  L L  C +LE FP+IL KME+++ +    + I
Sbjct: 682 KLKILNAFRCKRLRSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRELCLSNSSI 739

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
           TEL  SF+NL GL+ L                 L +L     +  AI ++PSS+ L   L
Sbjct: 740 TELSFSFQNLAGLQAL----------------DLSFL-----SPHAIFKVPSSIVLMPEL 778

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ-----------EIAYLSSLE 684
             +     KG +   +    G    G + +S   VR               +  + + ++
Sbjct: 779 TEIFVVGLKGWQWLKQE--EGEEKTGSI-VSSKVVRLTVAICNLSDEFFSIDFTWFAHMK 835

Query: 685 ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
            L LS NNF  LP  IK+   LR + + D   L+ +  +P  LK+   I+CK L S  + 
Sbjct: 836 ELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLKHFFAINCKSLTSSSIR 895

Query: 745 PFCLESLDLTGCNMLRSLP 763
            F  + L   G N +  LP
Sbjct: 896 KFLNQELHEAG-NTVFCLP 913



 Score = 43.5 bits (101), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 130/296 (43%), Gaps = 29/296 (9%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +T++P     LP LE    E C  L  + ++IG L+ L  + A      +    + L++ 
Sbjct: 647 LTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPIKLTS- 704

Query: 635 LRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIP---QEIAYLSSLEILYLSG 690
           L  L+ S C  LESFP+  +LG +  +  L +S+ ++ E+    Q +A L +L++ +LS 
Sbjct: 705 LEKLNLSFCYSLESFPK--ILGKMENIRELCLSNSSITELSFSFQNLAGLQALDLSFLSP 762

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ-SLPVLPFCLE 749
           +    +P+ I  M +L  I +      Q L +     K   ++  K+++ ++ +     E
Sbjct: 763 HAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRLTVAICNLSDE 822

Query: 750 --SLDLTGCNMLRSL-------PELPLC------LQYLNLEDCNMLRSLPELPLCLQLLT 794
             S+D T    ++ L         LP C      L+ L++ DC  LR +  +P  L+   
Sbjct: 823 FFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLKHFF 882

Query: 795 VRNCNRLQSLPEILLCLQELDA---SVLEKLSKHSPDLQWAPESLKSAAICFEFTN 847
             NC  L S        QEL     +V     K  P  +W  +  +  +I F F N
Sbjct: 883 AINCKSLTSSSIRKFLNQELHEAGNTVFCLPGKRIP--EWFDQQSRGPSISFWFRN 936


>gi|357452821|ref|XP_003596687.1| Disease-resistance protein [Medicago truncatula]
 gi|355485735|gb|AES66938.1| Disease-resistance protein [Medicago truncatula]
          Length = 1288

 Score =  280 bits (715), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 232/797 (29%), Positives = 355/797 (44%), Gaps = 154/797 (19%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           +D  +++GIWGMGG+GKTT A  ++D+ S++F+  CF+ +        GG+  +QKQ+L 
Sbjct: 256 NDDFRVLGIWGMGGVGKTTHATVLYDRISYQFDARCFIHNT-SKIYMDGGIVSVQKQILG 314

Query: 64  TTLSEK-------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            TL E+        E+AG  I          +K+L+VLD+++ + QL+ L        +G
Sbjct: 315 QTLDERNLDSYDTCEIAGIMINRLQSG----IKVLLVLDNIDHLEQLQELAINPKLLCRG 370

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++TTRD+ +L  +  +   ++ V  L   +A+E FC  AFK      D       V+
Sbjct: 371 SRIIITTRDEHILRVYGAD--TVHEVPLLNSNDAYELFCRKAFKGEDQTSDCVELIPEVL 428

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            Y +  PL ++V+GS LC +  + W   L  L    +S+I    D+L++S + L    K 
Sbjct: 429 KYAQHLPLAIKVVGSFLCTRDATQWKDALASLKNSPDSKI---MDVLQMSIDGLQHEEKE 485

Query: 237 IFLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQ 293
           IF+ IACFF+GE + +V  ILD         +  +++KSL++I    ++MHD+LQE+G++
Sbjct: 486 IFMHIACFFKGEREVYVKRILDACGLHPHIGIQRILEKSLITIKNQEIHMHDMLQELGKK 545

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIF--------------------- 332
           IVR    +EPG  SRLW   +   VL     T     I                      
Sbjct: 546 IVRHRFPEEPGSWSRLWRYNDFYHVLMTETDTPTSASIHKIVVWPLYVLGTLEKLSLVIF 605

Query: 333 --LDLSKI------------------KGINLDPR---------AFTNMSNLRLFKFYVPK 363
             LDL  I                  K I LD +          F+NM NL L   Y   
Sbjct: 606 GTLDLGTISYHEISIIREQCVGTNNVKAIVLDQKENFSKCRTEGFSNMRNLGLLILYHNN 665

Query: 364 FYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELN 423
           F                         L++L   LRYL W  YP  +LPSNF+P  LVELN
Sbjct: 666 F----------------------SGNLNFLSNNLRYLLWHGYPFTSLPSNFEPYYLVELN 703

Query: 424 LRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV--TINFSYC 481
           +  S +++ WEG K        +  YL  +     + L   P    F  P+   ++F+ C
Sbjct: 704 MPHSNIQRLWEGRK--------DLPYLKRMDLSNSKFLTETPK--FFWTPILERLDFTGC 753

Query: 482 VNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFC-KLRS 540
            NLI                    +V  SI  LT+L  L L+ C  L  +       L S
Sbjct: 754 TNLI--------------------QVHPSIGHLTELVFLSLQNCSSLVNLDFGIVSNLYS 793

Query: 541 LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
           L  L L GC  LE  P+                        F     LE L ++ C+ L 
Sbjct: 794 LRVLRLSGCTKLEKTPD------------------------FTGASNLEYLDMDGCTSLS 829

Query: 601 NLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSA 659
            + ++IG++  L ++ L     ++ +P+S+     L +LD   C  L + P    L  S 
Sbjct: 830 TVHESIGAIAKLRFLSLRDCIILAGIPNSINTITSLVTLDLRGCLKLTTLPLGQNLSSSH 889

Query: 660 MG---LLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM 716
           M     L +S   + ++P  I  L  LE L L GNNF++LP     + +L +++L   + 
Sbjct: 890 MESLIFLDVSFCNLNKVPDAIGELHCLERLNLQGNNFDALPYTFLNLGRLSYLNLAHCHK 949

Query: 717 LQSLPELPLCLKYLHLI 733
           L++ P +P  LK L L+
Sbjct: 950 LRAFPHIP-TLKDLSLV 965


>gi|295083305|gb|ADF78106.1| rj2 protein [Glycine max]
          Length = 1052

 Score =  280 bits (715), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 258/799 (32%), Positives = 369/799 (46%), Gaps = 126/799 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V ++GI G+GGIGK+TLA A+++  +  F+GSCF+ D+R  S    GL+HLQ  
Sbjct: 205 VESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREKS-NKKGLQHLQSI 263

Query: 61  MLSTTLSEK------LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +L   L EK      +E     I H    R++R K+L++LDDV++  QL+ ++G    FG
Sbjct: 264 LLREILGEKEINLASVEQGASIIQH----RLQRKKVLLILDDVDKHEQLQAIVGRPCWFG 319

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSR+++TTRDK++L       K+ Y V  L    A +     +FK              
Sbjct: 320 PGSRVIITTRDKQLLASHGV--KRTYEVELLNENNALQLLTWKSFKTEKVDPSYKEVLND 377

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           VV Y  G PL LEV+GS+L  K    W   +    RI   +I    +ILK+SF+ L    
Sbjct: 378 VVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQI---LEILKVSFDALEEEQ 434

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNF------LNMH 284
           K++FLDIAC F   D   V  IL     D +     +L++KSL+    ++      + MH
Sbjct: 435 KNVFLDIACCFNRYDLTKVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPRVTMH 494

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG---- 340
           D++++MG++IVRQES KEP KRSRLW P++I  VL+ N+GT  IE I LD          
Sbjct: 495 DLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKEEIV 554

Query: 341 INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYL 400
           + L+ +AF  M NL+       KF                        G  YLP  LR L
Sbjct: 555 VELNTKAFKKMKNLKTLIIRNGKF----------------------SKGPKYLPNNLRVL 592

Query: 401 HWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSS-----IQNFKYLSALSF 455
            W  YP   LPS+F PK L    L  S           C+ S       + F  L  L+F
Sbjct: 593 EWWRYPSHCLPSDFHPKKLAICKLPFS-----------CISSFELDGLWKMFVNLRILNF 641

Query: 456 KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT 515
             C+ L   P           +F  C NLI                     V +SI  L 
Sbjct: 642 DRCEGLTQIPDVSGLPNLEEFSFECCFNLI--------------------TVHNSIGFLD 681

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
            L++L+   CKRL+       KL SL  L L  C +LE FP+IL KME+++ +    + I
Sbjct: 682 KLKILNAFRCKRLRSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRELCLSNSSI 739

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
           TEL  SF+NL GL+ L                 L +L     +  AI ++PSS+ L   L
Sbjct: 740 TELSFSFQNLAGLQAL----------------DLSFL-----SPHAIFKVPSSIVLMPEL 778

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ-----------EIAYLSSLE 684
             +     KG +   +    G    G + +S   VR               +  + + ++
Sbjct: 779 TEIFVVGLKGWQWLKQE--EGEEKTGSI-VSSKVVRLTVAICNLSDEFFSIDFTWFAHMK 835

Query: 685 ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
            L LS NNF  LP  IK+   LR + + D   L+ +  +P  LK+   I+CK L S  + 
Sbjct: 836 ELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLKHFFAINCKSLTSSSIS 895

Query: 745 PFCLESLDLTGCNMLRSLP 763
            F  + L   G N +  LP
Sbjct: 896 KFLNQELHEAG-NTVFCLP 913


>gi|356514970|ref|XP_003526174.1| PREDICTED: TMV resistance protein N [Glycine max]
          Length = 1113

 Score =  279 bits (714), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 210/669 (31%), Positives = 328/669 (49%), Gaps = 87/669 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S   V++VGI GMGGIGKTTLA A++++ +++F+  CFV DV      +G L  +QKQ
Sbjct: 219 LESVSDVRVVGISGMGGIGKTTLASALYEKIAYQFDFHCFVDDVNYIYRRSGSLG-VQKQ 277

Query: 61  MLSTTLSEK-LEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGE-----LDQF 113
           +LS  L++K LE+   ++  +    R+R  + LIV D+VN+V QL+   G      L+  
Sbjct: 278 LLSQCLNDKNLEICNASVGTYLIGTRLRNKRGLIVFDNVNQVEQLRMFTGSRETLLLECL 337

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSR 173
           G GSRI++ +RD+ +L         +Y V  LE + A + FC  AFK ++   D    + 
Sbjct: 338 GGGSRIIIISRDEHILRTHGVHH--VYEVQPLEDDNAVQLFCKNAFKCDYIMSDYKMLTY 395

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            V+S+  G+PL +EV+G SL  +  S W  +L    R+ +++  DI D+L+IS++ L   
Sbjct: 396 DVLSHADGHPLAIEVIGKSLHGRNVSQWRGIL---VRLSDNKSKDIMDVLRISYDDLEEN 452

Query: 234 VKSIFLDIACFFEGEDKDFVASILDDSESDVLD-----------ILIDKSLVSISGNFLN 282
            + IFLDIACFF   D+D+     +  E ++LD           IL+DKSL++I    + 
Sbjct: 453 DREIFLDIACFF---DQDY----FEHCEEEILDFRGFNPEIGLQILVDKSLITIFDGRIY 505

Query: 283 MHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGIN 342
           MH +L+++G+ IVR++S KEP K SRLW+ +++ +V+ +N     +E I +D       N
Sbjct: 506 MHSLLRDLGKCIVREKSPKEPRKWSRLWECEDLYKVMSNNMEAKNLEAIVVDDKSWMFFN 565

Query: 343 LDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNG-LDYLPKKLRYLH 401
              R         L    +P++   + L     EE  +Y+K    +G L+YL  +L YL 
Sbjct: 566 TIMRVDALSKMKNLKLLKLPEY---DSLYGDEEEELCTYTKKDFFSGNLNYLSNELGYLI 622

Query: 402 WDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSL 461
           W  YP  +LP  F+P NL EL+L  S ++  W+  +      I N + L           
Sbjct: 623 WQCYPFNSLPQCFQPHNLFELDLSWSSIQHLWDSTQP-----IPNLRRL----------- 666

Query: 462 RSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLD 521
                          N SYC  LIE P   G+   LY                     L+
Sbjct: 667 ---------------NVSYCKYLIEVPNF-GEALNLYW--------------------LN 690

Query: 522 LRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
           L GC +L++I  S   LR L  L L  C +L + P  +E++   +        + ++  S
Sbjct: 691 LEGCVQLRQIHPSIGHLRKLTALNLKDCKSLVNLPHFVEELNLEELNLKGCEELRQIDPS 750

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
              L  L  L + DC  L NLP  +  L      L     + Q+ SS+     L +L+  
Sbjct: 751 IGRLRKLTALNLTDCKSLVNLPHFVEDLNLQELNLKGCVQLRQIHSSIGHLRKLTALNLI 810

Query: 642 HCKGLESFP 650
            CK L + P
Sbjct: 811 DCKSLVNLP 819



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 101/229 (44%), Gaps = 26/229 (11%)

Query: 573 TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVAL 631
           + I  L  S + +P L  L V  C  L  +P N G    LY++ L     + Q+  S+  
Sbjct: 648 SSIQHLWDSTQPIPNLRRLNVSYCKYLIEVP-NFGEALNLYWLNLEGCVQLRQIHPSIGH 706

Query: 632 SNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG- 690
              L +L+   CK L + P  F+  L+   L       +R+I   I  L  L  L L+  
Sbjct: 707 LRKLTALNLKDCKSLVNLPH-FVEELNLEELNLKGCEELRQIDPSIGRLRKLTALNLTDC 765

Query: 691 NNFESLPAIIKQMS----------QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
            +  +LP  ++ ++          QLR IH    ++ +        L  L+LIDCK L +
Sbjct: 766 KSLVNLPHFVEDLNLQELNLKGCVQLRQIHSSIGHLRK--------LTALNLIDCKSLVN 817

Query: 741 LP--VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELP 787
           LP  V    LE L+L GC  L       L   +LNL+ C  LR LPELP
Sbjct: 818 LPHFVEDLNLEELNLKGCEELSLKELSKL--LHLNLQHCKRLRYLPELP 864


>gi|356514965|ref|XP_003526172.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1518

 Score =  279 bits (714), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 242/765 (31%), Positives = 372/765 (48%), Gaps = 124/765 (16%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V++VGI GMGGIGKTTLA+A++++ S++++  CFV DV+   +  G L  +QKQ+LS  +
Sbjct: 504  VRVVGICGMGGIGKTTLARALYEKISYQYDFHCFVDDVKEIYKKIGSL-GVQKQLLSQCV 562

Query: 67   SEK-LEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF-----GQGSRI 119
            ++K +E+   +   +    R+R  + LIVLD+V+ V QL    G  +       G GSRI
Sbjct: 563  NDKNIEICNASKGTYLIGTRLRNKRGLIVLDNVSRVEQLHMFTGSRETLLRECVGGGSRI 622

Query: 120  VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
            +V +RD+ +L         +Y+V  L  + A + FC  AFK ++        +  V+S+ 
Sbjct: 623  IVISRDEHILRTHGVNH--VYQVKPLNQDNAVQLFCKNAFKCDYILSGYKMLTHDVLSHA 680

Query: 180  KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            +G+PL ++V+G+ L  +  S W   L  LN I +SE  DI  +L+IS++ L  + K IFL
Sbjct: 681  QGHPLAIQVIGNFLQGRNVSQWKSTLVRLNEI-KSE--DIMKVLRISYDDLEEKDKEIFL 737

Query: 240  DIACFFEGE-----DKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMG 291
            DIACFF  +      + +V  ILD    +    L IL+DKSL++IS   + MH +L+++G
Sbjct: 738  DIACFFSRDYSYKYSERYVKEILDFRGFNPEIGLPILVDKSLITISHGKIYMHRLLRDLG 797

Query: 292  RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR--AFT 349
            + IVR++S KEP   SRLWD K++  VL +N     +E I ++           R  A +
Sbjct: 798  KCIVREKSPKEPRNWSRLWDWKDLYEVLSNNMKAKNLEAIVVEDKTWMFFETTMRVDALS 857

Query: 350  NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLP-KKLRYLHWDTYPLR 408
             M NL+L  F  P++                    +    L+Y+   KL YL W  YP  
Sbjct: 858  KMKNLKLLMF--PEY-------------------TKFSGNLNYVSNNKLGYLIWPYYPFN 896

Query: 409  TLPSNFKPKNLVELNLRCSKVEQPWEGEKAC---------------VPSSIQNFKYLSAL 453
             LP  F+P NL+EL+L  S ++  W+  +                 +P   ++   L  L
Sbjct: 897  FLPQCFQPHNLIELDLSRSNIQHLWDSTQPIPKLRRLNLSLSALVKLPDFAEDLN-LRQL 955

Query: 454  SFKGCQSLRSF-PSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL---GQSAIEEVPS 509
            + +GC+ LR   PS  H      +N   C +L++ P  +  +    L   G   + ++  
Sbjct: 956  NLEGCEQLRQIHPSIGHLTKLEVLNLKDCKSLVKLPDFAEDLNLRELNLEGCEQLRQIHP 1015

Query: 510  SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK--MEHLKR 567
            SI  LT L  L+L+ CK L+ +  +  +L SL  L L GC  L +     E+    HLK+
Sbjct: 1016 SIGHLTKLVKLNLKDCKSLESLPNNILRLSSLQYLSLFGCSKLYNIRSSEEQRGAGHLKK 1075

Query: 568  IYSDRTPITELPS------SF--ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAA 619
            +      I E PS      SF  + LP   V F  D S  D   D++  L          
Sbjct: 1076 LR-----IGEAPSRSQSIFSFFKKGLPWPSVAF--DKSLEDAHKDSVRCL---------- 1118

Query: 620  SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
                 LP S+ +   +R LD S C  L                         +IP     
Sbjct: 1119 -----LP-SLPIFPCMRELDLSFCNLL-------------------------KIPDAFVN 1147

Query: 680  LSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
               LE LYL GNNFE+LP+ +K++S+L  ++L+    L+ LPELP
Sbjct: 1148 FQCLEELYLMGNNFETLPS-LKELSKLLHLNLQHCKRLKYLPELP 1191



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 686  LYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP--LCLKYLHLIDCKMLQSL-P 742
            L LS +N + L    + + +LR ++L   + L  LP+    L L+ L+L  C+ L+ + P
Sbjct: 910  LDLSRSNIQHLWDSTQPIPKLRRLNLS-LSALVKLPDFAEDLNLRQLNLEGCEQLRQIHP 968

Query: 743  VLPFC--LESLDLTGCNMLRSLPELP--LCLQYLNLEDCNMLRSL-PELPLCLQL--LTV 795
             +     LE L+L  C  L  LP+    L L+ LNLE C  LR + P +    +L  L +
Sbjct: 969  SIGHLTKLEVLNLKDCKSLVKLPDFAEDLNLRELNLEGCEQLRQIHPSIGHLTKLVKLNL 1028

Query: 796  RNCNRLQSLPEILLCLQEL 814
            ++C  L+SLP  +L L  L
Sbjct: 1029 KDCKSLESLPNNILRLSSL 1047


>gi|297805928|ref|XP_002870848.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316684|gb|EFH47107.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 983

 Score =  279 bits (714), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 220/677 (32%), Positives = 348/677 (51%), Gaps = 86/677 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG--------NSETAGGLE 55
           SD V+++GIWG  GIGKTT+A+ ++ QFS  FE S F+ +++         + E +  ++
Sbjct: 255 SDEVRMIGIWGPSGIGKTTIARVLYSQFSESFELSIFMENIKELMYTRPVCSDEYSAKIQ 314

Query: 56  HLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF 113
            LQ+Q LS  ++ K       +PH    ++R+   ++LIVLD +++  QL  +  E   F
Sbjct: 315 -LQQQFLSQIINHK----DMELPHLGVAQDRLNDKRVLIVLDSIDQSIQLDAIAKETRWF 369

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP---EDLNW 170
           G GSRI++TT+D+R+L K  G    IY+V      EA++ FC +AF +N      E+L W
Sbjct: 370 GHGSRIIITTQDQRLL-KAHGI-NHIYKVEFPSAYEAYQIFCMYAFGQNFPKDGFEELAW 427

Query: 171 HSRSVVSYTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNK 229
                V+   GN PL L V+GS      +  W   L  L    ++ I  I   LK S++ 
Sbjct: 428 Q----VTKLLGNLPLGLRVMGSHFRGMPRHEWVNALPRLKIRLDASIQSI---LKFSYDA 480

Query: 230 LTPRVKSIFLDIACFFEGED----KDFVA-SILDDSESDVLDILIDKSLVSI---SGNF- 280
           L    K +FL IAC F  E+    +D++A S LD  +   L +L +KSL++I   S N  
Sbjct: 481 LCDEDKDLFLHIACLFNNEEMVKVEDYLALSFLDVRQG--LHLLAEKSLIAIEILSTNHT 538

Query: 281 -LNMHDILQEMGRQIVRQESE----KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL 335
            + +H++L ++GR IVR +      +EPGKR  L D ++I  VL  N G+  + GI L++
Sbjct: 539 SIKVHNLLVQLGRDIVRHKPGHQCIREPGKRQFLVDARDICEVLTDNTGSRNVIGILLEV 598

Query: 336 SKIKG-INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLP 394
             + G +N+  R F  MSN +  +F+ P  YE E              K+ LP GL+ LP
Sbjct: 599 ENLSGQLNISERGFEGMSNHKFLRFHGP--YEGEN------------DKLYLPQGLNNLP 644

Query: 395 KKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALS 454
           +KLR + W  +P++ LPSNF  K LV+L++  SK++  W+G +    S +     L  + 
Sbjct: 645 RKLRIIEWFRFPMKCLPSNFCTKYLVQLHMWNSKLQNMWQGNQESRRSDLPPLGNLKRMD 704

Query: 455 FKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECL 514
            +  + L+  P           + S   NL E          +  G S++ E+PSSI  L
Sbjct: 705 LRESKHLKELP-----------DLSTATNLEEL---------ILYGCSSLPELPSSIGSL 744

Query: 515 TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTP 574
             L+VL LRGC +L+ + T+   L SL  L L  CL ++ FPEI     ++KR+   +T 
Sbjct: 745 QKLQVLLLRGCSKLEALPTNI-NLESLDYLDLADCLLIKSFPEI---STNIKRLNLMKTA 800

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           + E+PS+ ++   L  L +     L   P  +  +  LY+     + I ++P  V   + 
Sbjct: 801 VKEVPSTIKSWSPLRKLEMSYNDNLKEFPHALDIITKLYF---NDTKIQEIPLWVQKISR 857

Query: 635 LRSLDSSHCKGLESFPR 651
           L++L    CK L + P+
Sbjct: 858 LQTLVLEGCKRLVTIPQ 874



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 136/338 (40%), Gaps = 98/338 (28%)

Query: 432 PWEGE--KACVPSSIQNF----KYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVN-L 484
           P+EGE  K  +P  + N     + +    F     ++  PSN            +C   L
Sbjct: 626 PYEGENDKLYLPQGLNNLPRKLRIIEWFRF----PMKCLPSN------------FCTKYL 669

Query: 485 IEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
           ++    + K+  ++ G    E   S +  L +L+ +DLR  K LK +        +L  L
Sbjct: 670 VQLHMWNSKLQNMWQGNQ--ESRRSDLPPLGNLKRMDLRESKHLKELP-DLSTATNLEEL 726

Query: 545 ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
           IL GC                       + + ELPSS  +L  L+VL +  CSKL+ LP 
Sbjct: 727 ILYGC-----------------------SSLPELPSSIGSLQKLQVLLLRGCSKLEALPT 763

Query: 605 NIGSLEYLYYILAA---------------------ASAISQLPSSVALSNMLRSLDSSHC 643
           NI +LE L Y+  A                      +A+ ++PS++   + LR L+ S+ 
Sbjct: 764 NI-NLESLDYLDLADCLLIKSFPEISTNIKRLNLMKTAVKEVPSTIKSWSPLRKLEMSYN 822

Query: 644 KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
             L+ FP             H  D   +              LY +    + +P  ++++
Sbjct: 823 DNLKEFP-------------HALDIITK--------------LYFNDTKIQEIPLWVQKI 855

Query: 704 SQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           S+L+ + LE    L ++P+L   L  +  I+C+ L+ L
Sbjct: 856 SRLQTLVLEGCKRLVTIPQLSDSLSKVAAINCQSLERL 893



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 106/258 (41%), Gaps = 49/258 (18%)

Query: 672 EIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
           E+P  I  L  L++L L G +  E+LP  I  +  L ++ L D  +++S PE+   +K L
Sbjct: 736 ELPSSIGSLQKLQVLLLRGCSKLEALPTNI-NLESLDYLDLADCLLIKSFPEISTNIKRL 794

Query: 731 HLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPL 788
           +L+   + +    +     L  L+++  + L+  P     +  L   D      + E+PL
Sbjct: 795 NLMKTAVKEVPSTIKSWSPLRKLEMSYNDNLKEFPHALDIITKLYFNDT----KIQEIPL 850

Query: 789 C------LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC 842
                  LQ L +  C RL ++P++   L ++ A   + L +        PE      I 
Sbjct: 851 WVQKISRLQTLVLEGCKRLVTIPQLSDSLSKVAAINCQSLERLDFSFHNHPE------IF 904

Query: 843 FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEI 902
             F NC KLN +A   I   S                             +L  LPG E+
Sbjct: 905 LWFINCFKLNNEAREFIQTSS----------------------------STLAFLPGREV 936

Query: 903 PDWFS-NQSSGSSICIQL 919
           P   +  +++GSSI + L
Sbjct: 937 PANITYRRANGSSIMVNL 954



 Score = 40.0 bits (92), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 15/140 (10%)

Query: 666 SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
           S++  + + Q   + S L+ ++  GN  ES  + +  +  L+ + L +   L+ LP+L  
Sbjct: 662 SNFCTKYLVQLHMWNSKLQNMW-QGNQ-ESRRSDLPPLGNLKRMDLRESKHLKELPDLST 719

Query: 726 C--LKYLHLIDCKMLQSLPVLPFCLESLD------LTGCNMLRSLP-ELPL-CLQYLNLE 775
              L+ L L  C    SLP LP  + SL       L GC+ L +LP  + L  L YL+L 
Sbjct: 720 ATNLEELILYGC---SSLPELPSSIGSLQKLQVLLLRGCSKLEALPTNINLESLDYLDLA 776

Query: 776 DCNMLRSLPELPLCLQLLTV 795
           DC +++S PE+   ++ L +
Sbjct: 777 DCLLIKSFPEISTNIKRLNL 796


>gi|399920221|gb|AFP55568.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1143

 Score =  279 bits (714), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 227/697 (32%), Positives = 337/697 (48%), Gaps = 103/697 (14%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTTLA+ ++ + SH+FE   F+++VR  S T G L  LQ Q+LS  L E  +        
Sbjct: 239 KTTLARLVYQKISHQFEVCIFLANVREVSATHG-LVCLQNQILSQILKEGNDQVWDVYSG 297

Query: 80  FT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
            T  K   R   +L+VLDDV++  QL+ L GE D FG  SRI++TTRD+ VL     E  
Sbjct: 298 ITMIKRCFRNKAVLLVLDDVDQSEQLEHLAGEKDCFGLRSRIIITTRDRHVLVTHDIE-- 355

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           K Y +  L  +EA + F   AF+++   ED    S+S V Y  G PL L++LGS L  + 
Sbjct: 356 KPYELKRLGEDEALQLFSWKAFRKHEPEEDYAEQSKSFVRYAGGLPLALKILGSFLYKRS 415

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W      L +        +++ILKISF+ L    K  FLDIACF    D + +   +
Sbjct: 416 LDSWSSAFQKLKQTPNP---TVFEILKISFDGLDEMEKKTFLDIACFRRLYDNESMIEQV 472

Query: 258 DDS---ESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
             S       +++L++KSL++IS GN + MHD+++EMG +IVRQES  EPG RSRLW   
Sbjct: 473 YSSGFCSRIAIEVLVEKSLLAISFGNHVYMHDLIREMGCEIVRQESCDEPGGRSRLWLRN 532

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           +I  V   N GT+  EGIFL L K++  + +  AF+ M  L+L   +             
Sbjct: 533 DIFHVFTKNTGTEVTEGIFLHLDKLEEADWNLEAFSKMCKLKLLYIH------------- 579

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
                     ++L  G  YLP  LR+L W  YP  +LP  F+P  L EL+L  S ++  W
Sbjct: 580 ---------NLRLSLGPKYLPNALRFLKWSWYPSISLPPGFQPAELAELSLPYSNIDHLW 630

Query: 434 EGEK----------------------------------ACVP-----SSIQNFKYLSALS 454
            G K                                   C+       SI + K L   +
Sbjct: 631 IGIKYLSNLKSIDLSYSTNLTRTPDFTGIPYLEKLILEGCISLVKIHPSIASLKRLKIWN 690

Query: 455 FKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG---KVTRLYLGQSAIEEVPSSI 511
           F+ C+S++S P  +      T + S C  L   P+  G   +++RL LG +A+E++P SI
Sbjct: 691 FRNCKSIKSLPGEVDMEFLETFDVSGCSKLKMIPEFVGQTKRLSRLCLGGTAVEKLP-SI 749

Query: 512 ECLTD-LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYS 570
           E L++ L  LDL G    ++  + F K   + +       +L  FP    K  H      
Sbjct: 750 EHLSESLVELDLSGIVIREQPYSRFLKQNLIAS-------SLGLFP---RKSPH------ 793

Query: 571 DRTPITELPSSFENLPGLEVLFVEDCSKLDN-LPDNIGSLEYLYYILAAASAISQLPSSV 629
              P+T L +S ++   L  L + DC+  +  LP++IGSL  L  +    +    LP+S+
Sbjct: 794 ---PLTPLLASLKHFSSLTELKLNDCNLCEGELPNDIGSLSSLRRLELRGNNFVSLPASI 850

Query: 630 ALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHIS 666
            L + LR ++  +CK L+  P       SA G L ++
Sbjct: 851 HLLSKLRYINVENCKRLQQLPEP-----SARGYLSVN 882



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 153/574 (26%), Positives = 236/574 (41%), Gaps = 110/574 (19%)

Query: 487  FPQIS-------GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
            +P IS        ++  L L  S I+ +   I+ L++L+ +DL     L R +  F  + 
Sbjct: 602  YPSISLPPGFQPAELAELSLPYSNIDHLWIGIKYLSNLKSIDLSYSTNLTR-TPDFTGIP 660

Query: 540  SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT--PITELPSSFENLPGLEVLFVEDCS 597
             L  LIL GC++L      +  ++ LK I++ R    I  LP    ++  LE   V  CS
Sbjct: 661  YLEKLILEGCISLVKIHPSIASLKRLK-IWNFRNCKSIKSLPGEV-DMEFLETFDVSGCS 718

Query: 598  KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL--- 654
            KL  +P+ +G  + L  +    +A+ +LPS   LS  L  LD S     E     FL   
Sbjct: 719  KLKMIPEFVGQTKRLSRLCLGGTAVEKLPSIEHLSESLVELDLSGIVIREQPYSRFLKQN 778

Query: 655  LGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDF 714
            L  S++GL        R+ P  +                  L A +K  S L  + L D 
Sbjct: 779  LIASSLGLFP------RKSPHPLT----------------PLLASLKHFSSLTELKLNDC 816

Query: 715  NMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLP---ELPLCLQY 771
            N+ +   ELP         D   L SL         L+L G N + SLP    L   L+Y
Sbjct: 817  NLCEG--ELP--------NDIGSLSSL-------RRLELRGNNFV-SLPASIHLLSKLRY 858

Query: 772  LNLEDCNMLRSLPELPLCLQLLTVR--NCNRLQSLPEILLCLQELDASVLEKLSKHSPDL 829
            +N+E+C  L+ LPE P     L+V   NC  LQ  P++                      
Sbjct: 859  INVENCKRLQQLPE-PSARGYLSVNTNNCTSLQVFPDL---------------------- 895

Query: 830  QWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSE 889
               P   +  A     +NCL   G  +      S+L+ R + +  +    E      L E
Sbjct: 896  ---PGLCRLLAFRLCCSNCLSTVGNQDASYFIYSVLK-RLVEVGMMVHMPETPRCFPLPE 951

Query: 890  LRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHS-SCRNLIGFAFCAVLDSKKVDSDCFR 948
            L     ++PGSEIP+WF+NQS G S+  +LP  + +    IGFA CA++      S   R
Sbjct: 952  L-----LIPGSEIPEWFNNQSVGDSVTEKLPSDACNYSKWIGFAVCALIGPPDNPSAASR 1006

Query: 949  YFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIA 1008
              +++++++  + T        + Y   +    I SD ++L F P      P+       
Sbjct: 1007 ILFINYRWNSYVCT-------PIAY---FEVKQIVSDHLVLLFLPSEGFRKPENCLEDTC 1056

Query: 1009 T---FKFFAERKFYK----IKRCGLCPVYANPSE 1035
                F F ++  FY     IK+CG   +Y +  E
Sbjct: 1057 NEVEFVFGSKGGFYSDLHIIKKCGARALYEHDVE 1090


>gi|9759605|dbj|BAB11393.1| disease resistance protein RPS4 [Arabidopsis thaliana]
          Length = 1232

 Score =  279 bits (714), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 217/701 (30%), Positives = 330/701 (47%), Gaps = 100/701 (14%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S +  + +G+ GM GIGKTTLAK +F +    F    F+ DV    E     E L   
Sbjct: 231 LKSENVTRFIGVVGMPGIGKTTLAKRLFSECGKHFLHKMFLDDVSQKPEPFLD-ETLHTD 289

Query: 61  MLSTTLSEKLEVAGPNIPH----FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           +L      K      N       + K +++  K+ +VLD+V +  Q+ +++G  D    G
Sbjct: 290 LLLGLWKSKNNGRDGNRAKLSIDYIKTQLQGKKVFVVLDNVGDKSQIDKILGGCDWIKAG 349

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKEN---HCPE--DLNWH 171
           SRIV+TT  K V++         Y V GL   +A  HF   AF  +   + P   DL   
Sbjct: 350 SRIVITTSSKSVIQGLNS----TYLVPGLSSCDALNHFNYHAFSASDGFYQPSFTDL--- 402

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT 231
           ++  V Y+ G+P VL++L   L  K +S+W +    L+ +  S  + I D+L+I +++L 
Sbjct: 403 AKQFVDYSMGHPSVLKLLARELRSKDESYWKE---KLSALANSPSNTIQDVLRIPYDELK 459

Query: 232 PRVKSIFLDIACFFEGEDKDFVASILDDS-ESDVLDI--LIDKSLVSISGNFLNMHDILQ 288
            + K +FLDIA FF  E++ +V  +L  S  +D  +I  L DK L+ ISG+ + M+D+L 
Sbjct: 460 EQHKIVFLDIAYFFRFENESYVRRLLGSSAHADASEITDLADKFLIDISGDRVEMNDLLY 519

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
                +  Q S +      RL    EI  VL +      + G++LD+ ++K + LD   F
Sbjct: 520 TFAIGLNSQASSENTTSERRLSKHSEIVDVLMNKAEATKVRGVYLDMFEVKEMGLDSDTF 579

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M +LR  KFY    +          E +   SK+  P GL++LP++LRYL+W  YP +
Sbjct: 580 NKMDDLRYLKFYNSHCHR---------ECEAEDSKLNFPEGLEFLPQELRYLNWLKYPEK 630

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEK------------------------------- 437
            LP NF PKNL++L L  S++EQ WE EK                               
Sbjct: 631 NLPINFDPKNLIDLKLPYSQIEQIWEEEKDTSNLQWLDLNHSSKLHSLSGLSRAQKLQSI 690

Query: 438 --------ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
                     +P  +QN + L  L+ +GC SL S P ++  V   T+  S C    EF  
Sbjct: 691 NLEGCTGLKTLPQVLQNMESLMFLNLRGCTSLESLP-DITLVGLRTLILSNCSRFKEFKL 749

Query: 490 ISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
           I+  +  LYL  +AI+E+PS+I  L  L  L L+ CK L  +  S   L+++  +IL GC
Sbjct: 750 IAKNLEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIILSGC 809

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
            +LE FPE+ + ++HLK +  D T I ++P                 ++   LP +IG  
Sbjct: 810 SSLESFPEVNQNLKHLKTLLLDGTAIKKIPELS-----SVRRLSLSSNEFRILPRSIG-- 862

Query: 610 EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
            YLY+                    L  LD  HCK L S P
Sbjct: 863 -YLYH--------------------LNWLDLKHCKNLVSVP 882



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 199/463 (42%), Gaps = 53/463 (11%)

Query: 588  LEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
            L+ + +E C+ L  LP  + ++E L ++ L   +++  LP    +   LR+L  S+C   
Sbjct: 687  LQSINLEGCTGLKTLPQVLQNMESLMFLNLRGCTSLESLPDITLVG--LRTLILSNCSRF 744

Query: 647  ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQ 705
            + F     L    +  L++   A++E+P  I  L  L  L L    N  SLP  I  +  
Sbjct: 745  KEFK----LIAKNLEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLKA 800

Query: 706  LRFIHLEDFNMLQSLPELPLCLKYLH--LIDCKMLQSLPVLPFCLESLDLTGCNMLRSLP 763
            ++ I L   + L+S PE+   LK+L   L+D   ++ +P              N  R LP
Sbjct: 801  IQEIILSGCSSLESFPEVNQNLKHLKTLLLDGTAIKKIP--ELSSVRRLSLSSNEFRILP 858

Query: 764  E---LPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLE 820
                    L +L+L+ C  L S+P LP  LQ L    C  L+++            S+L 
Sbjct: 859  RSIGYLYHLNWLDLKHCKNLVSVPMLPPNLQWLDAHGCISLETI------------SIL- 905

Query: 821  KLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYE 880
                 S  L    E L S    F FTNC KL     N I +    +I+ M+ A  R  YE
Sbjct: 906  -----SDPLLAETEHLHST---FIFTNCTKLYKVEENSIESYPRKKIQLMSNALAR--YE 955

Query: 881  MAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSK 940
              +   L  L G  I  PG ++P WF++++ G  +   LP H +   L G A CAV+  K
Sbjct: 956  KGL--ALDVLIG--ICFPGWQVPGWFNHRTVGLELKQNLPRHWNAGGLAGIALCAVVSFK 1011

Query: 941  KVDSDCFRYFYV-SFQFDLEIKTLSETKHVDLGY--NSRYIEDLIDSDRVILGFKPCLNV 997
               S   R     S +F  E KTL +   +  G+  +  Y    I SD V +G+   LN 
Sbjct: 1012 DYISKNNRLLVTCSGEFKKEDKTLFQFSCILGGWTEHGSYEAREIKSDHVFIGYTSWLNF 1071

Query: 998  GFPD---GYHHTIATFKFFAERKFYKIK-----RCGLCPVYAN 1032
               D   G   T A+ +F       ++      +CG   +Y++
Sbjct: 1072 MKSDDSIGCVATEASLRFQVTDGTREVTNCTVVKCGFSLIYSH 1114


>gi|357437847|ref|XP_003589199.1| Disease resistance protein [Medicago truncatula]
 gi|355478247|gb|AES59450.1| Disease resistance protein [Medicago truncatula]
          Length = 1613

 Score =  279 bits (713), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 290/915 (31%), Positives = 435/915 (47%), Gaps = 149/915 (16%)

Query: 10   VGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK 69
            V   G+ GIGKTTLA  +++   H+FE SCF+ +++ NSE  G L +LQK +L   + EK
Sbjct: 205  VAKVGIHGIGKTTLALEVYNLIVHQFESSCFLENIQENSEKHG-LIYLQKIILLEIIGEK 263

Query: 70   LEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
             E+   ++       ++R+R+ K+L++LDDV+E  QL  + G  D +G GSR+++TTRDK
Sbjct: 264  -EIELTSVKQGISVIQQRLRKKKVLLLLDDVDEQKQLDAIAGGNDWYGLGSRVIITTRDK 322

Query: 127  RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENH-CPEDLNWHSRSVVSYTKGNPLV 185
             +L     E    Y V+ L  ++AFE     AFK N  CP   +  +R++ ++  G PL 
Sbjct: 323  GLLLSHGVEST--YEVHELNKKDAFELLRQKAFKTNKVCPNYADVLNRAL-THASGLPLA 379

Query: 186  LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF 245
            LEV+GS L  K        L    RI + ++  +   LK+SF+ L    KS+FLDIAC F
Sbjct: 380  LEVIGSHLFHKTVEQCKSTLDRYERIPDKKMQTL---LKVSFDALEEEEKSVFLDIACCF 436

Query: 246  EGEDKDFVASIL----DDSESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESE 300
            +G D   V  +L     D+  D + +L++KSL+ I+    + +HD++++MG++IVRQES 
Sbjct: 437  KGYDLTIVNKMLHAHHGDNMEDHMQVLVEKSLIKITESRSVTLHDVIEDMGKEIVRQESP 496

Query: 301  KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
            KEPGKRSRLW P++I +VL+ N GT  IE I+LD S I+ +  D  AF  M NLR     
Sbjct: 497  KEPGKRSRLWCPEDIVQVLEENTGTSKIEIIYLD-SSIE-VKWDEEAFKKMENLRTLIIR 554

Query: 361  VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
               F E  K                      YLP  LR L W  YP   +PS+F PK L 
Sbjct: 555  HGAFSESPK----------------------YLPNSLRILEWRKYPSGGVPSDFYPKKLA 592

Query: 421  ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
               +        W           + F+ +  L+   C  L   P     +    ++F Y
Sbjct: 593  ICKIAFDFTSFVWGDFLK------KKFQNMKVLNIDNCGFLARMPDISGLLNLEELSFQY 646

Query: 481  CVNLIEFPQISGKVTRLYLGQ--------------------------SAIEEVPSSIEC- 513
            C NLI      G + +L + +                           ++E  P  ++  
Sbjct: 647  CENLITMDDSVGLLAKLKILRVGSCKKLKSLPPLKLVSLEELDLSYIDSLESFPHVVDGF 706

Query: 514  LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI----LEKMEHLKRIY 569
            L  L+ L ++ C  ++ I     K+ SL  L LL C +LE FP +    LEK++ L+ I 
Sbjct: 707  LNKLQTLSVKNCNTIRSIPP--LKMASLEELNLLYCDSLECFPLVVDGLLEKLKILRVIG 764

Query: 570  SDR---------TPITELPSSFEN------------LPGLEVLFVEDCSKLDNLPD-NIG 607
                        T + EL  S+ N            L  L++L V  C KL N+P   +G
Sbjct: 765  CSNIKSIPPFKLTSLEELDLSYCNSLTSFPVIVDGFLDKLKLLSVRYCCKLKNIPPLKLG 824

Query: 608  SLEYL------------------------YYILAAASAISQLPSSVALSNMLRSLDSSHC 643
            +LE L                          +    S IS  P  +   + L+ L  S+C
Sbjct: 825  ALEQLDLSYCNSLESFPPVVDGLLGKLKILKVFCCNSIISIPPLKL---DSLKELHLSYC 881

Query: 644  KGLESFPRTFLLGLSAMGLLHI-SDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIK 701
              LE+F       L  +  L I S   ++ IP     L+SLE L LS   + ES P ++ 
Sbjct: 882  DSLENFQPVMNGLLKKLQFLSIKSCINIKSIPP--LQLTSLEELDLSNCQSLESFPPVVD 939

Query: 702  Q-MSQLRFIHLEDFNMLQSLPELPLCLKYLHLID---CKMLQSLP-VLPFCLESLDLT-- 754
            Q +  L+F+ +   + L+ +P  PL L  L L+D   C  L S P V+   LE L +   
Sbjct: 940  QLLENLKFLSIRYCHKLRIIP--PLKLDSLELLDISYCDSLDSFPHVVDGMLEKLKIMRV 997

Query: 755  -GCNMLRSLPELPLC-LQYLNLEDCNMLRSLPELPLC----LQLLTVRNCNRLQSLPEI- 807
              C+ L+S+P L L  L+ L+L  C+ L S P +       L++L+V+ CN+L+S P + 
Sbjct: 998  KSCSNLKSIPPLKLASLEELDLSYCDSLESFPTVVDGFLGKLRVLSVKGCNKLKSFPPLK 1057

Query: 808  LLCLQELDASVLEKL 822
            L  L+ LD S  + L
Sbjct: 1058 LASLEVLDLSYCDNL 1072



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 143/534 (26%), Positives = 229/534 (42%), Gaps = 113/534 (21%)

Query: 450  LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPS 509
            L  +  K C +L+S P  L       ++ SYC +L  FP     V   +LG+        
Sbjct: 992  LKIMRVKSCSNLKSIPP-LKLASLEELDLSYCDSLESFPT----VVDGFLGK-------- 1038

Query: 510  SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI----LEKMEHL 565
                   L VL ++GC +LK       KL SL  L L  C NLE FP +    ++K++ L
Sbjct: 1039 -------LRVLSVKGCNKLKSFPP--LKLASLEVLDLSYCDNLESFPLLVDGFMDKLQFL 1089

Query: 566  KRIYSDRTPITELPSSFENLPGLEVLFVED-----CSKLDNLPDNI-GSLEYL-YYILAA 618
              IY          S   ++P L++  +E      C  L + P  + G LE L  + + +
Sbjct: 1090 SIIYC---------SKLRSIPPLKLALLEHFDLSYCDSLVSFPPVVDGMLEKLRIFRVIS 1140

Query: 619  ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD-YAVREIPQEI 677
             + I  +P     S  L  L+ ++C GLESFP      L  + +L++   + ++ IP   
Sbjct: 1141 CNRIQSIPPLKLTS--LEELNLTYCDGLESFPHVVDGLLGKLKVLNVRYCHKLKSIPP-- 1196

Query: 678  AYLSSLEILYLS-GNNFESLPAIIK-QMSQLRFIHLEDFNMLQSLPELPLC-LKYLHLID 734
              L SLE L LS  ++ +S P I+  Q+ +L+ + + + + ++S+P L L  L+ L+L  
Sbjct: 1197 LKLDSLEQLDLSYCDSLKSFPPIVDGQLKKLKILRVTNCSNIRSIPPLNLASLEELNLSY 1256

Query: 735  CKMLQSLPVL----PFCLESLDLTGCNMLRSLPELPLC-LQYLNLEDCNMLRSLP----- 784
            C  L+  P++    P  L+ L +  C  L+S+P L    L+ L+L  C+ L S P     
Sbjct: 1257 CHNLECFPLVVDRFPNNLKVLSVRYCRKLKSIPPLKFASLEVLDLSYCDNLESFPKILGE 1316

Query: 785  ---------------ELPLCLQLLT------VRNCNRLQSLPEILLCLQELDASVLEK-- 821
                           ELP   Q LT      + NC  +Q LP  ++ +QELD  ++E   
Sbjct: 1317 MENIRQVHLYTTPIKELPFSFQNLTRLRTLYLCNCGIVQ-LPSSIVMMQELDELIIEDGG 1375

Query: 822  -------------LSKHSPDLQW--------APESLKSAAICFE----FTNCLKLNGKAN 856
                         +S  S  +++        + ESL    + F       NC  L     
Sbjct: 1376 WLFQKEDQGDKEVISMQSSQVEFLRVWNCNLSDESLAIGLMWFANKLFLDNCENLQ---E 1432

Query: 857  NKILADSLLRIRHMAIASLRLG-YEMAINEKLSELRGSLIVLPGSEIPDWFSNQ 909
             K +  +L     +   SL L      +N++L E   +  V P +EIP W  +Q
Sbjct: 1433 IKGIPPNLKTFSAINCISLTLSCTSKFMNQELHESGNTSFVFPQAEIPKWIDHQ 1486



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 135/280 (48%), Gaps = 41/280 (14%)

Query: 341  INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM---STEE-QLSYSK--VQLPNGLDYLP 394
            ++  P     +  LR+F+  V     I+ +P +   S EE  L+Y       P+ +D L 
Sbjct: 1120 VSFPPVVDGMLEKLRIFR--VISCNRIQSIPPLKLTSLEELNLTYCDGLESFPHVVDGLL 1177

Query: 395  KKLRYLHWD-TYPLRTLPSNFKPKNLVELNLR-CSKVEQPWEGEKACVPSSIQNFKYLSA 452
             KL+ L+    + L+++P   K  +L +L+L  C  +       K+  P      K L  
Sbjct: 1178 GKLKVLNVRYCHKLKSIPP-LKLDSLEQLDLSYCDSL-------KSFPPIVDGQLKKLKI 1229

Query: 453  LSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIE 512
            L    C ++RS P  L+      +N SYC NL  FP +             ++  P+   
Sbjct: 1230 LRVTNCSNIRSIPP-LNLASLEELNLSYCHNLECFPLV-------------VDRFPN--- 1272

Query: 513  CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR 572
               +L+VL +R C++LK I     K  SL  L L  C NLE FP+IL +ME++++++   
Sbjct: 1273 ---NLKVLSVRYCRKLKSIPP--LKFASLEVLDLSYCDNLESFPKILGEMENIRQVHLYT 1327

Query: 573  TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
            TPI ELP SF+NL  L  L++ +C  +  LP +I  ++ L
Sbjct: 1328 TPIKELPFSFQNLTRLRTLYLCNCG-IVQLPSSIVMMQEL 1366


>gi|227438269|gb|ACP30624.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 590

 Score =  278 bits (712), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 207/610 (33%), Positives = 309/610 (50%), Gaps = 92/610 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGG-----LE 55
           +DS+D V++VGI G  GIGKTT+A+A++++ S+ F  + F+  +RG+ E         + 
Sbjct: 27  LDSND-VRMVGILGPAGIGKTTIARALYNKLSNSFTHTAFMESIRGSGERTHSDDYAFML 85

Query: 56  HLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF 113
           HLQ+Q LS T + K       I H    +ER++  K+L+VLDDV ++ QLK + G    F
Sbjct: 86  HLQEQFLSKTFNHK----DLKIHHLGVAEERLKDKKVLLVLDDVVDLKQLKAMAGNSQWF 141

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSR 173
           G GSRI++TT+  R+LE    +   IY V      +A+E FC +AF +    +     + 
Sbjct: 142 GCGSRIIMTTKAARLLEAHGIDH--IYHVGLPSLAQAYEIFCLYAFGQKFPYDGYEDLAM 199

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            V       PL L V GS L    K  W   +  L R+  S   DI  +L+ S+  L  +
Sbjct: 200 EVTGLAGDLPLGLRVFGSHLRGMSKEEW---IEALPRLRTSLDGDIEKVLRFSYEALCDK 256

Query: 234 VKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGN-FLNMHDILQE 289
            K +FL IAC FEGE   ++   L  S+ DV   L +L + SL+SI+    L MH+++++
Sbjct: 257 DKDLFLHIACLFEGESISYLEKCLAHSDLDVRHGLKVLANNSLISITEEERLVMHNLVEQ 316

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAF 348
           +G++IVRQE + EP +R  L D +EI  VL  N G+ ++ GI LD+  IK  + +D RAF
Sbjct: 317 LGKEIVRQEHKDEPERRKFLVDAREICDVLTDNTGSKSVLGIDLDIMAIKDELCIDKRAF 376

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M+ L+  +F  P  Y   K            +K+ LP GL+ LP+KLR L WD +PLR
Sbjct: 377 EGMTRLQFLRFKSP--YGSGK-----------NNKLILPQGLNNLPRKLRLLCWDEFPLR 423

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGE----------------------------KAC- 439
            LP +F  + LV L +R S +E+ WEG                               C 
Sbjct: 424 CLPPDFAAEFLVILEMRNSSIEKLWEGSPLMDMSYSLKLKDIPNVSNATNLETLILNGCE 483

Query: 440 ----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT 495
               +P+  +N   L+ L   GC+ L+  P+N++      ++ S+C  L  FP+IS ++ 
Sbjct: 484 SLVEIPTWFKNLSRLTHLKMVGCKKLKDLPTNINMESLYHLDLSHCTQLKTFPEISTRIG 543

Query: 496 RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
            L L  + IEEVPSSI    D   L +RGCK L+                         F
Sbjct: 544 YLDLENTGIEEVPSSIRSWPDFAKLSMRGCKSLRM------------------------F 579

Query: 556 PEILEKMEHL 565
           P++L+ ME L
Sbjct: 580 PDVLDSMEEL 589



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 20/117 (17%)

Query: 714 FNMLQSLPELPLCLK------YLHLIDCKMLQSLPVLPFCLESL---DLTGCNMLRSLPE 764
            N  +SL E+P   K      +L ++ CK L+ LP     +ESL   DL+ C  L++ PE
Sbjct: 479 LNGCESLVEIPTWFKNLSRLTHLKMVGCKKLKDLPT-NINMESLYHLDLSHCTQLKTFPE 537

Query: 765 LPLCLQYLNLEDCNM------LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELD 815
           +   + YL+LE+  +      +RS P+       L++R C  L+  P++L  ++EL+
Sbjct: 538 ISTRIGYLDLENTGIEEVPSSIRSWPDFA----KLSMRGCKSLRMFPDVLDSMEELN 590



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 29/133 (21%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           + E+P+ F+NL  L  L +  C KL +LP NI ++E LY+                    
Sbjct: 485 LVEIPTWFKNLSRLTHLKMVGCKKLKDLPTNI-NMESLYH-------------------- 523

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNF 693
              LD SHC  L++FP       + +G L + +  + E+P  I        L + G  + 
Sbjct: 524 ---LDLSHCTQLKTFPEIS----TRIGYLDLENTGIEEVPSSIRSWPDFAKLSMRGCKSL 576

Query: 694 ESLPAIIKQMSQL 706
              P ++  M +L
Sbjct: 577 RMFPDVLDSMEEL 589


>gi|356558197|ref|XP_003547394.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1122

 Score =  278 bits (712), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 207/618 (33%), Positives = 313/618 (50%), Gaps = 44/618 (7%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE 68
           ++GIWGM G GKTTLA+ +F +   E++G  F+++ R  S +  G++ L+K++ S  L  
Sbjct: 288 LIGIWGMAGNGKTTLAEEVFKKLQSEYDGCYFLANEREQS-SRHGIDSLKKEIFSGLLEN 346

Query: 69  KLEVAGPNIPHF-TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKR 127
            + +  PN+       R+ RMK+LIVLDDVN+   L++L+G  D FG GSRI++TTR  +
Sbjct: 347 VVTIDDPNVSLIDIDRRIGRMKVLIVLDDVNDPDHLEKLLGTPDNFGSGSRIIITTRYVQ 406

Query: 128 VLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLE 187
           VL   +  E  IY++     ++A E F   AFK++    + N  S+ VV Y KGNPLVL+
Sbjct: 407 VLNANKANE--IYQLGEFSLDKALELFNLIAFKQSDHQWEYNELSKKVVDYAKGNPLVLK 464

Query: 188 VLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEG 247
           VL   LC K K  W  +L  L R+  +   D+Y ++K+S++ L  + + IFLD+ACFF  
Sbjct: 465 VLAQLLCGKDKEEWEGMLDSLKRMPPA---DVYKVMKLSYDVLDRKEQQIFLDLACFFLR 521

Query: 248 EDK----DFVASILDDSESD-----VLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQ 297
            +       + S+L  +ES       L  L D++L++ S  N + MHD LQEM  +IVR+
Sbjct: 522 TNTMVNVSNLKSLLKGNESQETVTFRLGRLKDQALITYSDDNVIAMHDSLQEMAMEIVRR 581

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
           ES ++PG RSRLWDP +I    K++K T AI  I + L       L P  F  M+ L   
Sbjct: 582 ESSEDPGSRSRLWDPNDIFEASKNDKSTKAIRSILIHLPTFMKQELGPHIFGKMNRL--- 638

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
                +F EI    S   EE     +  L   L +   +LR+L W  YPL++LP NF  +
Sbjct: 639 -----QFLEI----SGKCEEDSFDEQNILAKWLQFSANELRFLCWYHYPLKSLPENFSAE 689

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
            LV L L   +++  W G        ++N   L  L     + L   P   +      + 
Sbjct: 690 KLVILKLPKGEIKYLWHG--------VKNLVNLKELHLTDSKMLEELPDLSNATNLEVLV 741

Query: 478 FSYCVNLIEF-PQIS--GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
              C  L    P I   GK+ +L L         +S   L  L  L+L  C++L+++S  
Sbjct: 742 LEGCSMLTTVHPSIFSLGKLEKLNLQDCTSLTTLASNSHLCSLSYLNLDKCEKLRKLSLI 801

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
              ++ L     L    ++ F         L+ +  + + I +LPSS ++L  L  L V 
Sbjct: 802 TENIKEL----RLRWTKVKAFSFTFGDESKLQLLLLEGSVIKKLPSSIKDLMQLSHLNVS 857

Query: 595 DCSKLDNLPDNIGSLEYL 612
            CSKL  +P    SL+ L
Sbjct: 858 YCSKLQEIPKLPPSLKIL 875



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 127/311 (40%), Gaps = 59/311 (18%)

Query: 663  LHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLP 721
            LH++D  + E   +++  ++LE+L L G +   ++   I  + +L  ++L+D   L +L 
Sbjct: 717  LHLTDSKMLEELPDLSNATNLEVLVLEGCSMLTTVHPSIFSLGKLEKLNLQDCTSLTTLA 776

Query: 722  ELP-LC-LKYLHLIDCKMLQSLPVLPFCLESLDLTGC----------------------N 757
                LC L YL+L  C+ L+ L ++   ++ L L                         +
Sbjct: 777  SNSHLCSLSYLNLDKCEKLRKLSLITENIKELRLRWTKVKAFSFTFGDESKLQLLLLEGS 836

Query: 758  MLRSLPELP---LCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL 814
            +++ LP      + L +LN+  C+ L+ +P+LP  L++L  R      SL  ++      
Sbjct: 837  VIKKLPSSIKDLMQLSHLNVSYCSKLQEIPKLPPSLKILDARYSQDCTSLKTVVF----- 891

Query: 815  DASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIAS 874
                        P    A E LK       F NCLKLN ++   I  ++ + +   A   
Sbjct: 892  ------------PST--ATEQLKENRKEVLFWNCLKLNQQSLEAIALNAQINVIKFANRC 937

Query: 875  LRLGYEMAIN-----EKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL---PPHSSCR 926
            L       +      +K       + V PGS + +W   ++  + I I +   PP     
Sbjct: 938  LSAPNHDDVENYNDYDKKYHFYQVVYVYPGSSVLEWLEYKTRNNYIIIDMSSAPPSLP-- 995

Query: 927  NLIGFAFCAVL 937
              +GF FC  L
Sbjct: 996  --VGFIFCFAL 1004



 Score = 46.6 bits (109), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)

Query: 559 LEKMEHLKRIY-SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-L 616
           ++ + +LK ++ +D   + ELP    N   LEVL +E CS L  +  +I SL  L  + L
Sbjct: 708 VKNLVNLKELHLTDSKMLEELPD-LSNATNLEVLVLEGCSMLTTVHPSIFSLGKLEKLNL 766

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE 676
              ++++ L S+  L + L  L+   C+ L    R   L    +  L +    V+     
Sbjct: 767 QDCTSLTTLASNSHLCS-LSYLNLDKCEKL----RKLSLITENIKELRLRWTKVKAFSFT 821

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL---HLI 733
               S L++L L G+  + LP+ IK + QL  +++   + LQ +P+LP  LK L   +  
Sbjct: 822 FGDESKLQLLLLEGSVIKKLPSSIKDLMQLSHLNVSYCSKLQEIPKLPPSLKILDARYSQ 881

Query: 734 DCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLL 793
           DC  L+++ V P        T    L+   +  L    L L      +SL  + L  Q+ 
Sbjct: 882 DCTSLKTV-VFPS-------TATEQLKENRKEVLFWNCLKLNQ----QSLEAIALNAQIN 929

Query: 794 TVRNCNRLQSLP 805
            ++  NR  S P
Sbjct: 930 VIKFANRCLSAP 941


>gi|297794833|ref|XP_002865301.1| hypothetical protein ARALYDRAFT_917053 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311136|gb|EFH41560.1| hypothetical protein ARALYDRAFT_917053 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1164

 Score =  278 bits (712), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 214/676 (31%), Positives = 332/676 (49%), Gaps = 78/676 (11%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            +++G+ GM GIGKTTL K ++  +  +F     +  +RG S        L+        
Sbjct: 240 TRVIGVVGMPGIGKTTLLKELYKTWKGKFSRYALIDQIRGKSNNF----RLECLPTLLLE 295

Query: 67  SEKLEVAGPNI-----PHFT-KERVRRMKLLIVLDDVNEVGQLKRLIGELD------QFG 114
               E+  P I     P+ T K  +R  K+L+VLDDV+E  Q+  L+G+ D         
Sbjct: 296 KLLPELNNPQIDSVEEPYKTHKGLLRERKVLVVLDDVSEREQIYALLGKYDLQNKHEWIK 355

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHC--PE-DLNWH 171
            GSRIV+ T DK +L   +G     Y V  L   +  + F   AF ++    P+ D    
Sbjct: 356 DGSRIVIATNDKSLL---KGLVHDTYVVRQLNHRDGLQLFRYHAFHDDQAITPKVDFMKL 412

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT 231
           S   V Y +G+PL L++LG  L  K   HW   L  L    +S    I +++++SF++L+
Sbjct: 413 SDEFVHYARGHPLALKILGRELYEKNMKHWETKLKIL---AQSPTTYIGEVVQVSFDELS 469

Query: 232 PRVKSIFLDIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNFLNMHDILQ 288
              K  FLDIACF   +D D+V S+L   D   ++ +  L +K L+      + MHD+L 
Sbjct: 470 MAQKDAFLDIACF-RSQDVDYVESLLVSSDPGSAEAIKALKNKFLIDTCDGRVEMHDLLY 528

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRA 347
              R++  + S +   K+ RLW  ++I  V +   G   + GIFLDLS++KG  +LD   
Sbjct: 529 TFSRELDLRASTQGGSKQRRLWLQQDIINVQQKTMGAADVRGIFLDLSEVKGETSLDREH 588

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F N+ NLR  KFY           S   +E  + +K+ +P+GL+   K++R LHW  +PL
Sbjct: 589 FKNICNLRYLKFY----------NSHCPQECKTNNKINMPDGLELPLKEVRCLHWLKFPL 638

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEG---------------EKACVPSSIQNFKYLSA 452
             LP++F P NLV+L L  S++E+ WEG                K C  S +   + L  
Sbjct: 639 EELPNDFDPINLVDLKLPYSEIERLWEGVKDTPVLKWVDLNHSSKLCSLSGLSKAQNLQR 698

Query: 453 LSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIE 512
           L+ +GC SL S   +++ +   T+  S C N  EFP I   +  LYL  + I ++P ++ 
Sbjct: 699 LNLEGCTSLESL-RDVNLMSLKTLTLSNCSNFKEFPLIPENLEALYLDGTVISQLPDNVV 757

Query: 513 CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR 572
            L  L +L+++ CK L+ I T   +L++L  LIL GCL L+ FPEI      LK +  D 
Sbjct: 758 NLKRLVLLNMKDCKMLENIPTCVGELKALQKLILSGCLKLKEFPEI--NKSSLKILLLDG 815

Query: 573 TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALS 632
           T I  +P     LP ++ L +    ++  LP  I  L Y          + +LP +    
Sbjct: 816 TSIKTMP----QLPSVQYLCLSRNDQISYLPVGINQLTY----------VPELPPT---- 857

Query: 633 NMLRSLDSSHCKGLES 648
             L+ LD+  C  L++
Sbjct: 858 --LQYLDAHGCSSLKN 871



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 213/485 (43%), Gaps = 62/485 (12%)

Query: 574  PITELPSSFE--NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVA 630
            P+ ELP+ F+  NL  L++ +    S+++ L + +     L ++ L  +S +  L S ++
Sbjct: 637  PLEELPNDFDPINLVDLKLPY----SEIERLWEGVKDTPVLKWVDLNHSSKLCSL-SGLS 691

Query: 631  LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
             +  L+ L+   C  LES     L+ L  + L + S++  +E P       +LE LYL G
Sbjct: 692  KAQNLQRLNLEGCTSLESLRDVNLMSLKTLTLSNCSNF--KEFP---LIPENLEALYLDG 746

Query: 691  NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLES 750
                 LP  +  + +L  ++++D  ML+++P    C+  L                 L+ 
Sbjct: 747  TVISQLPDNVVNLKRLVLLNMKDCKMLENIP---TCVGELK---------------ALQK 788

Query: 751  LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRN---------CNRL 801
            L L+GC  L+  PE+      + L D   ++++P+LP    L   RN          N+L
Sbjct: 789  LILSGCLKLKEFPEINKSSLKILLLDGTSIKTMPQLPSVQYLCLSRNDQISYLPVGINQL 848

Query: 802  QSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILA 861
              +PE+   LQ LDA     L   +  L     ++++    F FTNC  L   A  +I +
Sbjct: 849  TYVPELPPTLQYLDAHGCSSLKNVATPLARIVSTVQNHCT-FNFTNCGNLEQAAKEEITS 907

Query: 862  DSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
             +  + + +  A  R  Y   +N   SE   S    PG E+P WF ++  GS +  +L P
Sbjct: 908  YAQRKCQLLPDA--RKHYNEGLN---SEALFS-TCFPGCEVPSWFGHEVVGSLLQRKLLP 961

Query: 922  HSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSE---TKHVDLGYNSRYI 978
            H   + L G A CAV+ S   + D    F V+  F ++ +  S    T  V +       
Sbjct: 962  HWHDKRLSGIALCAVV-SFLDNQDQISCFSVTCTFKIKAEDKSWVPFTCPVGIWTREGDQ 1020

Query: 979  EDLIDSDRVILGFKP------CLNVGFPDGYHHTIATFKFFAER-----KFYKIKRCGLC 1027
            +D I+SD V + +        CL     D  + T A+ +F           +K+ +CGL 
Sbjct: 1021 KDKIESDHVFIAYISCPHSIRCLEDENSDKCNFTEASLEFTVTSGTSGVGVFKVLKCGLS 1080

Query: 1028 PVYAN 1032
             VY N
Sbjct: 1081 LVYEN 1085


>gi|357499343|ref|XP_003619960.1| Resistance protein [Medicago truncatula]
 gi|355494975|gb|AES76178.1| Resistance protein [Medicago truncatula]
          Length = 1180

 Score =  278 bits (712), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 241/753 (32%), Positives = 366/753 (48%), Gaps = 119/753 (15%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           +S D V +VG++G+GG+GK+TLAKA F+  + +FE  CF+ +VR NS    GLE+LQ+Q+
Sbjct: 213 ESDDVVHMVGLYGIGGLGKSTLAKATFNSIADKFEVFCFLENVRENS-AKHGLENLQEQL 271

Query: 62  LSTTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           L  T+ E++++ G +      K+R+RR K+L++LDD++++ QL  L G  D FG GSR++
Sbjct: 272 LLKTIGEEIKLGGVSQGIQIIKDRLRRKKVLLILDDIDKLEQLDALAGGFDWFGNGSRVI 331

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK++L     E + +Y V GL   EA E     AFK N  P          VSY  
Sbjct: 332 ITTRDKQLLTNH--EIELMYEVEGLYGTEALELLRWMAFKNNKVPSSYEHILNRAVSYAS 389

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PLVLE++GS+L  K    W   L    RI + +I +I   L++S++ L    +S+FLD
Sbjct: 390 GLPLVLEIVGSNLFGKSIQIWKGALDGYERIPDKKIQEI---LRVSYDALEEEQQSVFLD 446

Query: 241 IACFFEGEDKDFVASILDDSESDVL----DILIDKSLVSISGN-----FLNMHDILQEMG 291
           IAC F+    +    IL       +     +L +KSL+ IS +     ++ +HD++++MG
Sbjct: 447 IACCFKEHSWEEFEDILRTHYGHCIKHHVQVLAEKSLIVISRSKWGYIYVTLHDLIKDMG 506

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL-SKIKGINLDPRAFTN 350
           +++VRQ+S KEPG+RSRLW   +I  VL+ N GT  +E ++++  SK   I+ + +AF  
Sbjct: 507 KEVVRQQSSKEPGERSRLWCHNDIIHVLQGNTGTSKVEMLYMNFPSKKTVIDWNGKAFMK 566

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M+NL+                       L   K     G +YLP  LR L WD YP  +L
Sbjct: 567 MTNLK----------------------TLIIKKGHFSKGPEYLPSSLRVLKWDRYPSDSL 604

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
            S+   K                             F+ +   S   CQ L   P     
Sbjct: 605 SSSILNK----------------------------KFENMKVFSLDKCQHLTHIPD---V 633

Query: 471 VC-PVTINFSY--CVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKR 527
            C P+   FS+  C NLI                     +  SI  L  LE+L+   C +
Sbjct: 634 SCLPILEKFSFKKCRNLI--------------------TIDISIGYLDKLEILNAENCSK 673

Query: 528 LKRISTSFCKLR--SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL 585
           L+    SF  LR  SL  L L GC +L+ FP++L +M  +K I    T I ELPSSF NL
Sbjct: 674 LE----SFPPLRLPSLKDLKLSGCKSLKSFPKLLCEMTKIKGICLYDTSIGELPSSFRNL 729

Query: 586 PGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKG 645
             L  L +          D  G L+    I A  + I+ + +S    N+L   D+     
Sbjct: 730 NELHYLQI--------FGD--GKLKISSNIFAMPNKINSISASGC--NLLLPKDNDKMNS 777

Query: 646 LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQ 705
            E F     L LS     ++SD     +P  + +  ++  L LSGN F+ +P  + ++  
Sbjct: 778 -EMFSNVKCLRLSN----NLSDGC---LPIFLKWCVNVTSLDLSGNKFKIIPECLSELHL 829

Query: 706 LRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
           +  + L+    L+ +  +P  L     I C+ L
Sbjct: 830 IVDLSLDFCEYLEEIRGIPPNLYNFSAIGCESL 862


>gi|357499513|ref|XP_003620045.1| Resistance protein [Medicago truncatula]
 gi|355495060|gb|AES76263.1| Resistance protein [Medicago truncatula]
          Length = 894

 Score =  278 bits (712), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 238/764 (31%), Positives = 359/764 (46%), Gaps = 132/764 (17%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S D V +VG++G GG+GK+TLAKAI++  + +FE SCF+ +VR NS T+  L+HLQ+++L
Sbjct: 215 SDDGVHMVGLYGTGGLGKSTLAKAIYNFIADQFECSCFLENVRENS-TSNKLKHLQEELL 273

Query: 63  STTLSEKLEVAG--PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             TL  +++  G    IP + KER+ R K+L++LDDV+ + QL  L G  D FG+GS+++
Sbjct: 274 LKTLQLEIKFGGVSEGIP-YIKERLHRKKVLLILDDVDNMKQLHALAGGPDWFGRGSKVI 332

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           + TRDK +L       K +++V GL   EA E     AFK ++ P          V+Y  
Sbjct: 333 IATRDKHLLTCHG--IKSMHKVEGLYGTEALELLRWMAFKSDNVPSGYEEILNRAVAYAS 390

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PLV+E++GS+L  K    W   L   +RI   EI  I   LK+S++ L    +S+FLD
Sbjct: 391 GLPLVIEIVGSNLFGKNIEEWKYTLDGYDRIPNKEIQKI---LKVSYDSLEEEEQSVFLD 447

Query: 241 IACFFEG---EDKDF-VASILDDSESDVLDILIDKSLVSISG---NFLNMHDILQEMGRQ 293
           IAC F+G   ED  + + S    S +  L +L +KSL+       +++ +HD++++MG++
Sbjct: 448 IACCFKGYNWEDAKYTLHSHYGHSITHHLGVLAEKSLIDQYWEYRDYVMLHDLIEDMGKE 507

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMS 352
           +VRQES KEPG+RSRL    +I RVL+ N GT  IE I+++L  ++  I+   +AF  M+
Sbjct: 508 VVRQESIKEPGERSRLCCQDDIVRVLRENTGTSKIEMIYMNLHSMESVIDKKGKAFKKMT 567

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            L+                       L         GL YLP  LR L W     + L S
Sbjct: 568 KLK----------------------TLIIENGHFSGGLKYLPSSLRVLKWKGCLSKCLSS 605

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           N   K                             F+ +  L+   C+ L   P       
Sbjct: 606 NILNK----------------------------KFQNMKVLTLNYCEYLTHIPDVSGLSN 637

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
              ++F+ C NLI                     + +SI  L  LE L   GC++L+R  
Sbjct: 638 LEKLSFTCCDNLI--------------------TIHNSIGHLNKLEWLSAYGCRKLERFP 677

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
                L SL  L L GC +L+ FPE+L KM  +  I    T I ELP SF+NL  L+ L 
Sbjct: 678 P--LGLASLKKLNLSGCESLDSFPELLCKMTKIDNILLISTSIRELPFSFQNLSELQELS 735

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
           V +           G+L +           +    S+  SNM                  
Sbjct: 736 VAN-----------GTLRF--------PKQNDKMYSIVFSNMTE---------------- 760

Query: 653 FLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE 712
               L+ M   ++SD     +P  + +  ++  L LS +NF+ LP  + +   L  I + 
Sbjct: 761 ----LTLMD-CNLSDEC---LPILLKWFVNVTCLDLSYSNFKILPECLSECHHLVLITVR 812

Query: 713 DFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGC 756
           D   L+ +  +P  LK+L   +CK L S        + L   GC
Sbjct: 813 DCESLEEIRGIPPNLKWLSASECKSLSSSSKRKLMSQKLHEAGC 856



 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 139/340 (40%), Gaps = 71/340 (20%)

Query: 515 TDLEVLDLRGCKRLKRISTSFC--KLRSLVTLILLGCLNLEHFPEI--LEKMEHLKRIYS 570
           + L VL  +GC   K +S++    K +++  L L  C  L H P++  L  +E L     
Sbjct: 588 SSLRVLKWKGCLS-KCLSSNILNKKFQNMKVLTLNYCEYLTHIPDVSGLSNLEKLSFTCC 646

Query: 571 DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA 630
           D   +  + +S  +L  LE L    C KL+  P            L  AS          
Sbjct: 647 DN--LITIHNSIGHLNKLEWLSAYGCRKLERFPP-----------LGLAS---------- 683

Query: 631 LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
               L+ L+ S C+ L+SFP   L  ++ +  + +   ++RE+P     LS L+ L ++ 
Sbjct: 684 ----LKKLNLSGCESLDSFPE-LLCKMTKIDNILLISTSIRELPFSFQNLSELQELSVA- 737

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQ---SLPELPLCLKYLHLIDCKMLQSLPVLPFC 747
           N     P    +M  + F ++ +  ++    S   LP+ LK+   + C            
Sbjct: 738 NGTLRFPKQNDKMYSIVFSNMTELTLMDCNLSDECLPILLKWFVNVTC------------ 785

Query: 748 LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEI 807
              LDL+  N  + LPE         L +C+ L           L+TVR+C  L+ +  I
Sbjct: 786 ---LDLSYSN-FKILPEC--------LSECHHL----------VLITVRDCESLEEIRGI 823

Query: 808 LLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTN 847
              L+ L AS  + LS  S     + +  ++    FEF N
Sbjct: 824 PPNLKWLSASECKSLSSSSKRKLMSQKLHEAGCTYFEFPN 863


>gi|357499337|ref|XP_003619957.1| Resistance-gene protein [Medicago truncatula]
 gi|355494972|gb|AES76175.1| Resistance-gene protein [Medicago truncatula]
          Length = 1118

 Score =  278 bits (712), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 226/682 (33%), Positives = 332/682 (48%), Gaps = 119/682 (17%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML-- 62
           D V +VGI+G+GG+GK+ LA+AI++  + +FEG CF+ DVR NS     L+HLQ+++L  
Sbjct: 217 DGVHMVGIYGIGGLGKSALARAIYNFVADQFEGLCFLHDVRENS-AQNNLKHLQEKLLLK 275

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
           +T L  KL+     IP   KER+ R K+L++LDDV+++ QL  L G  D FG GSR+++T
Sbjct: 276 TTGLKIKLDHVCEGIP-IIKERLCRNKILLILDDVDDMEQLHALAGGPDWFGHGSRVIIT 334

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TRDK +L     E  + Y V GL   EA E     AFK N  P          VSY  G 
Sbjct: 335 TRDKHLLTSHDIE--RTYAVEGLYGTEALELLRWMAFKNNKVPSSYEDILNRAVSYASGL 392

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PLVLE++GS+L  K    W   L    +I   +IH+I   LK+S++ L    +S+FLDIA
Sbjct: 393 PLVLEIVGSNLFGKSIKEWKGTLDGYEKIPNKKIHEI---LKVSYDALEEEQQSVFLDIA 449

Query: 243 CFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISG-------NFLNMHDILQEMG 291
           C F+G    E +D +        +  L +L +KSL+ IS        + + +HD++++MG
Sbjct: 450 CCFKGCGWEEFEDILHVHYGHCITHHLGVLAEKSLIKISTCYHSGSIDVVRVHDLIKDMG 509

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTN 350
           +++VRQES K+P KRSRLW  ++I  V+K N GT  IE I ++   ++  I+   +AF  
Sbjct: 510 KEVVRQESPKDPEKRSRLWRHEDIVHVIKENIGTSKIEMINMNFHSMESVIDQKGKAFKK 569

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M+ LR        F E                      GL YLP  L  L W      +L
Sbjct: 570 MTKLRTLIIENGHFSE----------------------GLKYLPSSLIVLKWKGCLSESL 607

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSAL-SFKGCQSLRSFPSNLH 469
            S+   KN   + +                  ++ + +YL+ +    G Q+L  F     
Sbjct: 608 SSSILSKNFQNMKVL-----------------TLDDNEYLTHIPDLSGLQNLEKF----- 645

Query: 470 FVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
                  +F YC NLI                     + +SI  L  LE L   GC +L+
Sbjct: 646 -------SFKYCENLI--------------------TIDNSIGHLNKLERLSAFGCSKLE 678

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
           R       L SL  L L  C +L+ FP++L +M ++  I+ + TPI EL SSF+NL  L+
Sbjct: 679 RFPP--LGLASLKELNLCCCDSLKSFPKLLCEMTNIDCIWLNYTPIGELLSSFQNLSELD 736

Query: 590 VLFVEDCSKLDN--------------LPDNIGSLEYLYYILAAASAISQ----------L 625
            L V +C  L++              L D   S EYL  +L     + +          L
Sbjct: 737 ELSVRECGMLNDKMYSIMFSNVTELSLKDCNLSDEYLQIVLKWCVNVEELELSNNNFKIL 796

Query: 626 PSSVALSNMLRSLDSSHCKGLE 647
           P  ++  + L+ LD S+C  LE
Sbjct: 797 PECLSECHHLKHLDLSYCTSLE 818



 Score = 40.0 bits (92), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 31/224 (13%)

Query: 583 ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSH 642
           +N   ++VL ++D   L ++PD  G      +       +  + +S+   N L  L +  
Sbjct: 614 KNFQNMKVLTLDDNEYLTHIPDLSGLQNLEKFSFKYCENLITIDNSIGHLNKLERLSAFG 673

Query: 643 CKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
           C  LE FP   L  L  + L      +++  P+ +  +++++ ++L+      L +  + 
Sbjct: 674 CSKLERFPPLGLASLKELNLCCCD--SLKSFPKLLCEMTNIDCIWLNYTPIGELLSSFQN 731

Query: 703 MSQLRFIHLEDFNMLQ--------------SLPELPLCLKYLHLI--DCKMLQSL----- 741
           +S+L  + + +  ML               SL +  L  +YL ++   C  ++ L     
Sbjct: 732 LSELDELSVRECGMLNDKMYSIMFSNVTELSLKDCNLSDEYLQIVLKWCVNVEELELSNN 791

Query: 742 --PVLPFCL------ESLDLTGCNMLRSLPELPLCLQYLNLEDC 777
              +LP CL      + LDL+ C  L  +  +P  L+ L+ E C
Sbjct: 792 NFKILPECLSECHHLKHLDLSYCTSLEEIRGIPPNLKELSAEGC 835


>gi|297838205|ref|XP_002886984.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332825|gb|EFH63243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 987

 Score =  278 bits (712), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 224/671 (33%), Positives = 347/671 (51%), Gaps = 62/671 (9%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG-------NSETAGGLEH 56
           SD V+++GIWG  GIGKTT+A+ +F QFS  FE S F+ +V+         S+      H
Sbjct: 215 SDEVRMIGIWGPSGIGKTTIARVLFSQFSGTFELSVFMENVKDLMYTRPVCSDDYSAKIH 274

Query: 57  LQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           LQKQ +S  ++ K       IPH    ++R++  K+ IVLD++++  QL  +  E   FG
Sbjct: 275 LQKQFMSQIINHK----DIEIPHLGVVEDRLKDKKVFIVLDNIDQSIQLDAIAKETRWFG 330

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSRI++TT+D+++L+   G    IY+V+     EA + FC +AF +N   +     +  
Sbjct: 331 CGSRIIITTQDRKLLKAHDGI-NDIYKVDFPSAYEACQIFCMYAFGQNFPKDGFEELAWE 389

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           V     G PL L V+GS      K  W   L  L    ++   +I  ILK S+N L    
Sbjct: 390 VARLLGGLPLGLRVMGSHFKGMSKHEWINALPRLRTRLDA---NIQSILKFSYNALCEED 446

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMG 291
           K +FL IAC F  +  + V   L +   DV   + +L +KSL+SI    + MH++L+++ 
Sbjct: 447 KDLFLQIACLFNNKRIEKVEEHLAEKSLDVRQGIHVLAEKSLISIEEGRIKMHNLLEKLA 506

Query: 292 RQIVRQ----ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPR 346
           ++IVR     +S +EPGKR  L    +I  +L ++ G+ ++ GI    S++   +N+  R
Sbjct: 507 KEIVRHKPGHQSIREPGKRQFLVHATDICEILTNDTGSKSVIGIHFYSSELSSELNISER 566

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           AF  MSNL+  +FY       +KL               LP GL+YL +KL+ L WD +P
Sbjct: 567 AFEGMSNLKFLRFYYRYGDRSDKL--------------YLPQGLNYLSRKLKILEWDRFP 612

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSL--RSF 464
           L  +PSNF  + LVELN+R SK+ + W+G    +P  + N K++     K  + L   S 
Sbjct: 613 LTCMPSNFCTEYLVELNMRFSKLHKLWDGN---MP--LANLKWMYLNHSKILKELPDLST 667

Query: 465 PSNLHFVCPVTINFSYCVNLIEFPQISGKVT---RLYLGQ-SAIEEVPSSIECLTDLEVL 520
            +NL  +  V      C +L+E P   GK T   +LYL   +++ E+PSSI  L  L+ L
Sbjct: 668 ATNLQELFLVK-----CSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKL 722

Query: 521 DLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPS 580
            L GC +L+ +  +   L SL  L L  CL L+ FPEI   ++ LK I    T I E+PS
Sbjct: 723 TLNGCTKLEVLPANI-NLESLEELDLTDCLVLKRFPEISTNIKVLKLI---GTAIKEVPS 778

Query: 581 SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS 640
           S ++   L  L   + S   NL ++  + + +  +      + ++P  V   + L++   
Sbjct: 779 STKSWLRLCDL---ELSYNQNLKESQHAFDIITTMYINDKEMQEIPLWVKKISRLQTFIL 835

Query: 641 SHCKGLESFPR 651
           S CK L S P+
Sbjct: 836 SGCKKLVSLPQ 846



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 27/191 (14%)

Query: 573 TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVAL 631
           + + ELPSS      L+ L++  C+ L  LP +IG+L  L  + L   + +  LP+++ L
Sbjct: 680 SSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCTKLEVLPANINL 739

Query: 632 SNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ-----------EIAYL 680
            + L  LD + C  L+ FP       + + +L +   A++E+P            E++Y 
Sbjct: 740 ES-LEELDLTDCLVLKRFPEIS----TNIKVLKLIGTAIKEVPSSTKSWLRLCDLELSYN 794

Query: 681 SSLE----------ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
            +L+           +Y++    + +P  +K++S+L+   L     L SLP+L   L YL
Sbjct: 795 QNLKESQHAFDIITTMYINDKEMQEIPLWVKKISRLQTFILSGCKKLVSLPQLSDSLSYL 854

Query: 731 HLIDCKMLQSL 741
            +++C+ L+ L
Sbjct: 855 KVVNCESLERL 865



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 17/230 (7%)

Query: 562 MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG---SLEYLYYILAA 618
           + +LK +Y + + I +          L+ LF+  CS L  LP +IG   +L+ LY  L  
Sbjct: 645 LANLKWMYLNHSKILKELPDLSTATNLQELFLVKCSSLVELPSSIGKATNLQKLY--LNM 702

Query: 619 ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIA 678
            +++ +LPSS+   + L+ L  + C  LE  P    + L ++  L ++D  V +   EI+
Sbjct: 703 CTSLVELPSSIGNLHKLQKLTLNGCTKLEVLPAN--INLESLEELDLTDCLVLKRFPEIS 760

Query: 679 YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL--HLIDCK 736
             +++++L L G   + +P+  K  S LR   LE  +  Q+L E       +    I+ K
Sbjct: 761 --TNIKVLKLIGTAIKEVPSSTK--SWLRLCDLE-LSYNQNLKESQHAFDIITTMYINDK 815

Query: 737 MLQSLPVLP---FCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSL 783
            +Q +P+       L++  L+GC  L SLP+L   L YL + +C  L  L
Sbjct: 816 EMQEIPLWVKKISRLQTFILSGCKKLVSLPQLSDSLSYLKVVNCESLERL 865



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 35/286 (12%)

Query: 565 LKRIYSDRTPITELPSSF--ENLPGLEVLFVEDCSKLDNLPDN---IGSLEYLYYILAAA 619
           LK +  DR P+T +PS+F  E L  L + F    SKL  L D    + +L+++Y  L  +
Sbjct: 603 LKILEWDRFPLTCMPSNFCTEYLVELNMRF----SKLHKLWDGNMPLANLKWMY--LNHS 656

Query: 620 SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
             + +LP     +N L+ L    C  L   P +     +   L      ++ E+P  I  
Sbjct: 657 KILKELPDLSTATN-LQELFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGN 715

Query: 680 LSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
           L  L+ L L+G    E LPA I  +  L  + L D  +L+  PE+   +K L LI   + 
Sbjct: 716 LHKLQKLTLNGCTKLEVLPANI-NLESLEELDLTDCLVLKRFPEISTNIKVLKLIGTAIK 774

Query: 739 Q----SLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLC----- 789
           +    +   L  C   L+L+    L+        +  + + D    + + E+PL      
Sbjct: 775 EVPSSTKSWLRLC--DLELSYNQNLKESQHAFDIITTMYIND----KEMQEIPLWVKKIS 828

Query: 790 -LQLLTVRNCNRLQSLPEI---LLCLQELDASVLEKL--SKHSPDL 829
            LQ   +  C +L SLP++   L  L+ ++   LE+L  S H+P +
Sbjct: 829 RLQTFILSGCKKLVSLPQLSDSLSYLKVVNCESLERLDCSFHNPKI 874


>gi|227438143|gb|ACP30561.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1005

 Score =  278 bits (712), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 220/669 (32%), Positives = 328/669 (49%), Gaps = 103/669 (15%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAGGL 54
           + V++VGIWG  GIGKTT+A+A+F + S  F+ S F+             RGN +     
Sbjct: 78  EEVRMVGIWGSSGIGKTTIARALFSRLSRHFQSSIFIDRAFISKSMEIYSRGNPDDYNMK 137

Query: 55  EHLQKQMLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELDQ 112
            +LQ+  LS  L +K       I H     ER++  K+LI++DD+++   L  L G+   
Sbjct: 138 LNLQRNFLSEILDKK----DIKIDHLGALAERLKYHKVLIIIDDLDDQVVLDTLAGQAQW 193

Query: 113 FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
           FG+GSRI+  T+DK +L         IY V     + A +  C  AF++N  P      +
Sbjct: 194 FGRGSRIIAITKDKHILTAHGINH--IYEVKLPSEKLALQILCQSAFRKNSPPHGYLELA 251

Query: 173 RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
             VV      PL L VLGS L  + K +W   L  L +  + +IH     L++S++ L  
Sbjct: 252 CEVVERVDSLPLGLNVLGSHLRGEDKEYWLDQLSRLRKGIDGKIHKT---LRVSYDGLNN 308

Query: 233 RV-KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQ 288
           +  K++F  IAC F       +  +L DS+ DV   L  L D SL+ I    + MH +LQ
Sbjct: 309 KEDKALFRHIACLFNYSGIIEIKKLLADSDLDVNMGLRNLNDNSLIQIRRQTVVMHSLLQ 368

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG---INLDP 345
           EMG+++VR +S  EPGKR  L D K+I  VL+ + G+  + GI L+  +I     +++  
Sbjct: 369 EMGKEVVRSQS-NEPGKREFLTDSKDICNVLEEDIGSKNVLGISLNKDEIDEKDELHVHN 427

Query: 346 RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
            AF  M NLR    Y              T + ++  ++ L  GLDYLP KLR L WD Y
Sbjct: 428 SAFKGMRNLRFLNIY--------------TNQSMTKDRLHLLEGLDYLPPKLRLLSWDRY 473

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWE--GEKAC------------------------ 439
           P+R +PS F PK LV+L ++ SK+E+ WE  G   C                        
Sbjct: 474 PMRCMPSKFCPKYLVKLKMQGSKLEKLWEGIGNLTCLDYMDLSESENLKEIPDLSLATNL 533

Query: 440 -------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIE 486
                        +P SI+N   L  L   GC +LR+ PS ++    ++++   C  L  
Sbjct: 534 KTLNLSGCSSLVDLPLSIRNLSKLMTLEMSGCINLRTLPSGINLQSLLSVDLRKCSELNS 593

Query: 487 FPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLIL 546
           FP IS  ++ L L ++AIEE+PS++  L +L  L +   K  +R+  S   L +L+T + 
Sbjct: 594 FPDISTNISDLDLNETAIEEIPSNLR-LQNLVSLRMERIKS-ERLWASVQSLAALMTAL- 650

Query: 547 LGCLNLEHFPEILEKMEHLKRIY-SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD- 604
                             L ++Y S+ T + ELPSSF+NL  LE L + +C  L+ LP  
Sbjct: 651 ---------------TPLLTKLYLSNITSLVELPSSFQNLNKLEQLRITECIYLETLPTG 695

Query: 605 -NIGSLEYL 612
            NI SL+YL
Sbjct: 696 MNIESLDYL 704



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 182/408 (44%), Gaps = 51/408 (12%)

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAIS 623
           L+ +  DR P+  +PS F   P   V      SKL+ L + IG+L  L Y+ L+ +  + 
Sbjct: 465 LRLLSWDRYPMRCMPSKF--CPKYLVKLKMQGSKLEKLWEGIGNLTCLDYMDLSESENLK 522

Query: 624 QLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD-YAVREIPQEIAYLSS 682
           ++P  ++L+  L++L+ S C  L   P + +  LS +  L +S    +R +P  I   S 
Sbjct: 523 EIPD-LSLATNLKTLNLSGCSSLVDLPLS-IRNLSKLMTLEMSGCINLRTLPSGINLQSL 580

Query: 683 LEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM----- 737
           L +     +   S P I   +S L      D N   ++ E+P  L+  +L+  +M     
Sbjct: 581 LSVDLRKCSELNSFPDISTNISDL------DLNE-TAIEEIPSNLRLQNLVSLRMERIKS 633

Query: 738 ------LQSLPVLPFCLESLDLTGCNM--LRSLPELPLCLQYLN------LEDCNMLRSL 783
                 +QSL  L   L  L LT   +  + SL ELP   Q LN      + +C  L +L
Sbjct: 634 ERLWASVQSLAALMTALTPL-LTKLYLSNITSLVELPSSFQNLNKLEQLRITECIYLETL 692

Query: 784 PELP--LCLQLLTVRNCNRLQSLPEILLCLQ--ELDASVLEKLSK--------HSPDLQW 831
           P       L  L +  C RL+S PEI   +    L+ + +E+L K        HS    W
Sbjct: 693 PTGMNIESLDYLDLSGCTRLRSFPEISTNISTINLNNTGIEELEKADFTVSRIHSNKASW 752

Query: 832 APESLKSAAICFEFTNC-LKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSEL 890
                  +A+  E  N  +     A  +  + + +   ++   +  +  + A+ ++LS L
Sbjct: 753 CD---SPSAVVMETDNVHVHRTLSAPKEASSSTYVPKLYLKFVNCFILSQEALLQELSVL 809

Query: 891 RGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLD 938
           +G  ++ PG  +P +F+++S G S+ I L  +S       F  CA+++
Sbjct: 810 KG--LIFPGEVVPSYFTHRSIGCSLTIPLLHNSLSVPFFRFRACAMVE 855



 Score = 47.8 bits (112), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 24/125 (19%)

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKAC------------------------VPS 442
           +  +PSN + +NLV L +   K E+ W   ++                         +PS
Sbjct: 611 IEEIPSNLRLQNLVSLRMERIKSERLWASVQSLAALMTALTPLLTKLYLSNITSLVELPS 670

Query: 443 SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQS 502
           S QN   L  L    C  L + P+ ++      ++ S C  L  FP+IS  ++ + L  +
Sbjct: 671 SFQNLNKLEQLRITECIYLETLPTGMNIESLDYLDLSGCTRLRSFPEISTNISTINLNNT 730

Query: 503 AIEEV 507
            IEE+
Sbjct: 731 GIEEL 735


>gi|358348487|ref|XP_003638277.1| Cellulose synthase, partial [Medicago truncatula]
 gi|355504212|gb|AES85415.1| Cellulose synthase, partial [Medicago truncatula]
          Length = 1681

 Score =  278 bits (712), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 200/590 (33%), Positives = 300/590 (50%), Gaps = 74/590 (12%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG-GLEHLQKQ 60
           + S+ V  +GIWGMGG GKTT AKAI++Q  H F    F++++R   E    G+ HLQ+Q
Sbjct: 318 NQSNNVCSMGIWGMGGSGKTTTAKAIYNQIYHTFLYHHFIANIRQVCERGDEGIIHLQEQ 377

Query: 61  MLSTTL--SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +L+  L  +EK+      I    ++R+  +K LIVLDDV+ + Q + L G    FG GS 
Sbjct: 378 LLANVLGFNEKIYNTASGITTI-EDRLSGIKALIVLDDVSTLEQAEALCGNSKWFGSGSV 436

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEE--AFEHFCNFAFKENHCPEDLNWHSRSVV 176
           ++VT+RD R+L   R  E K YR+   E  E  + E FC  AF++    ED +  SRSVV
Sbjct: 437 LIVTSRDTRIL---RLLEVK-YRLTMKEMVEGKSLELFCWHAFRQPSPIEDFSELSRSVV 492

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP-RVK 235
           +Y  G PL LE++GS L  + K  W  VL    +I     + +  ILKIS++ L    VK
Sbjct: 493 AYCGGLPLALEIIGSMLHYRTKQEWRSVLSKFEKIPH---YLMQQILKISYDGLMDDMVK 549

Query: 236 SIFLDIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSI-SGNFLNMHDILQEMG 291
           ++FLDI CFF GEDK +V  IL+     +D+ + +LI++SL+ +   N L MH ++++MG
Sbjct: 550 AVFLDICCFFIGEDKAYVTEILNGCGLCADIGIAVLIERSLLKVEDNNTLGMHKLIRDMG 609

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IVR+ S KEPG+RSRLW   +I  VL  N G   +EG+ L   +   +     +F  M
Sbjct: 610 REIVRESSAKEPGERSRLWFHDDIHDVLTENTGRKNVEGLVLKSQRTGRVCFSTESFKRM 669

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            +LRL K                        +V L     YL K+LR++HW  +    +P
Sbjct: 670 KDLRLLKL----------------------DRVDLTGDYGYLSKELRWVHWKGFTFNYIP 707

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
            +F   NLV   L  S ++  W   K  V     N K L                     
Sbjct: 708 DDFHQGNLVVFELTHSNIKHVWNETKVLV-----NLKIL--------------------- 741

Query: 472 CPVTINFSYCVNLIEFPQISG--KVTRLYLGQS-AIEEVPSSIECLTDLEVLDLRGCKRL 528
                N S+ + L   P  S    + +L +     + E+  SI  L ++ +++L+ C  L
Sbjct: 742 -----NLSHSIYLESSPDFSKLPNLEKLIMNDCPCLSEIHPSIGDLNNIHLINLKNCISL 796

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITEL 578
            +   +  KL+SL TLILLGC  +    + + +ME L  + ++ T + E+
Sbjct: 797 SKFPKNIFKLKSLKTLILLGCTKIGSLEKDIVQMESLTELITNNTLVKEV 846



 Score = 44.3 bits (103), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 123/317 (38%), Gaps = 34/317 (10%)

Query: 643 CKGLESFPRTFLLGLSAMGLLHIS-DYAVREIPQEIAYLSS-LEILYLSGNNFESLPAII 700
           C   ESF R   L L  +  + ++ DY          YLS  L  ++  G  F  +P   
Sbjct: 660 CFSTESFKRMKDLRLLKLDRVDLTGDYG---------YLSKELRWVHWKGFTFNYIPDDF 710

Query: 701 KQMSQLRFIHLEDFNMLQSLPELPLC--LKYLHLIDCKMLQSLP---VLPFCLESLDLTG 755
            Q + + F  L   N+     E  +   LK L+L     L+S P    LP  LE L +  
Sbjct: 711 HQGNLVVF-ELTHSNIKHVWNETKVLVNLKILNLSHSIYLESSPDFSKLP-NLEKLIMND 768

Query: 756 CNMLRSL-PELPLC--LQYLNLEDCNMLRSLPELPL---CLQLLTVRNCNRLQSLPEILL 809
           C  L  + P +     +  +NL++C  L   P+       L+ L +  C ++ SL + ++
Sbjct: 769 CPCLSEIHPSIGDLNNIHLINLKNCISLSKFPKNIFKLKSLKTLILLGCTKIGSLEKDIV 828

Query: 810 CLQELDASVLEK-------LSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILAD 862
            ++ L   +           SKH          +    +   F     L G    KI   
Sbjct: 829 QMESLTELITNNTLVKEVVFSKHRSVSVHCQSEIHLKEVLRRFLE--GLYGAGLTKIGTS 886

Query: 863 SLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPH 922
              +I  +++ SL +G   +I++ L+        LPG   P W +    GSS+  Q+P  
Sbjct: 887 HASQISDLSLRSLLIGIGKSISQGLTTNDSGDFSLPGDNYPSWLAYTGEGSSVNFQVPED 946

Query: 923 SSCRNLIGFAFCAVLDS 939
           S C  L G   C V  S
Sbjct: 947 SDC-CLKGITLCVVYSS 962



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 22/231 (9%)

Query: 20   KTTLAKAIFD--QFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLE--VAGP 75
            KTTLA+ +++  +    FE   +V  V  N +    ++ + K+ML + +  K++  ++  
Sbjct: 1322 KTTLARFVYNDVEVQKHFEKKMWVC-VSSNFD----VKTIVKKMLESLIDRKIDDKLSFE 1376

Query: 76   NIPHFTKERVRRMKLLIVLDDVNEVGQLK--RLIGELDQFGQGSRIVVTTRDKRVLEKFR 133
             I     E +   + L+VLDD+      K  +L   L    + S++++T R   V E+  
Sbjct: 1377 YIQQKLHENLTGERYLLVLDDICNASHEKWTQLRTYLMCGAEDSKVLMTRRSAVVSERLE 1436

Query: 134  GEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK--GNPLVLEVLGS 191
              E  +Y ++GL  + ++       F +     +L   S  +    K  G PL +  LG 
Sbjct: 1437 ASE--LYVLSGLTLDVSWSMLKKIIFGKELSVVNLQLESIGIKIAEKCMGVPLAIRTLGG 1494

Query: 192  SLCLKRKS---HWGKVLH-DLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
               L+RKS    W  VL  D   +CE +   I  ILK S+  L+ +++  F
Sbjct: 1495 --LLQRKSEEREWIDVLQGDFWELCEDK-ESISSILKFSYQSLSLQLRQCF 1542


>gi|449447743|ref|XP_004141627.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1127

 Score =  278 bits (711), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 286/968 (29%), Positives = 438/968 (45%), Gaps = 211/968 (21%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNS-ETAGGLEHLQKQMLSTT 65
            V  VGI GMGGIGKTT+A+  +++   EFE  CF+S+VR N   T G L  LQ ++LS+ 
Sbjct: 247  VIFVGIHGMGGIGKTTIARVCYERIRDEFEAHCFLSNVRENYIRTLGNLSCLQTKLLSSM 306

Query: 66   LSEK----LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             S K    ++V          + + R K L+VLDDV+   Q+K LI + + FG GSR+++
Sbjct: 307  FSLKNNHIMDVEEGTA--MINKAIFRKKTLLVLDDVDSSDQIKGLIPDNNSFGNGSRVII 364

Query: 122  TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVSYTK 180
            TTR+   L    G  K+I+ ++ L++EEA +     AF +  CP E    HS+ +V    
Sbjct: 365  TTRNADFLSNEFGV-KRIFEMDELKYEEALQLLSLSAFMKT-CPKEGYLEHSKKIVKVVG 422

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHD-IYDILKISFNKLTPRVKSIFL 239
            G+PL L++LGSSL  K  S W +V+ ++       IH+ I+  LK+S++ L  R + IFL
Sbjct: 423  GHPLALKLLGSSLRNKNLSVWNEVIEEVG--GGGNIHEKIFKCLKVSYDGLDEREREIFL 480

Query: 240  DIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIV 295
            D+ACFF G+ ++ V  IL+         +++LI KSL+++S  N L+MH++LQEMGR+IV
Sbjct: 481  DVACFFNGKRREVVEEILNGCGFYAKTRIELLIQKSLLTLSYDNKLHMHNLLQEMGRKIV 540

Query: 296  RQESEKEPGKRSRLWDPKEISRVLKHNKGTDA-IEGIFLDLSKIKGINLDPRAFTNMSNL 354
            R +       R RL   K+I  V+     T+A I+ IF   S    +   P  F+ M  L
Sbjct: 541  RDKHV-----RDRLMCHKDIKSVV-----TEALIQSIFFKSSSKNMVEF-PILFSRMHQL 589

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDY-LPKKLRYLHWDTYPLRTLPSN 413
            RL                      L++  V+L N L+Y +P +LRYL W  YPL  LP +
Sbjct: 590  RL----------------------LNFRNVRLKNKLEYSIPSELRYLKWKGYPLEFLPID 627

Query: 414  FKPK-NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
               +  L+EL++  S ++Q W+ EK        N   L  +     Q L   P       
Sbjct: 628  SSEECKLIELHMCHSNLKQFWQQEK--------NLVELKYIKLNSSQKLSKTP------- 672

Query: 473  PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
                NF+                           +P       +L+ L+L  C  L  I 
Sbjct: 673  ----NFA--------------------------NIP-------NLKRLELEDCTSLVNIH 695

Query: 533  TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
             S      L+ L L  C+NL                       T LPS   N+  LEVL 
Sbjct: 696  PSIFTAEKLIFLSLKDCINL-----------------------TNLPSHI-NIKVLEVLI 731

Query: 593  VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL----ES 648
            +  CSK+  +P+  G+   L  +    ++IS LPSS+A  + L  L  ++CK L     +
Sbjct: 732  LSGCSKVKKVPEFSGNTNRLLQLHLDGTSISNLPSSIASLSHLTILSLANCKMLIDISNA 791

Query: 649  FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
               T L  L   G   +     +    E+  ++  E      N  +    I K++    F
Sbjct: 792  IEMTSLQSLDVSGCSKLGSRKGKGDNVELGEVNVRETTRRRRN--DDCNNIFKEI----F 845

Query: 709  IHLED--FNMLQSLPELP--LCLKYLHLIDCKMLQSLPVLPFCLESL---DLTGCNMLRS 761
            + L +     +  +P L     L  L+L DC  L+ +P    C+ SL   DL+G N    
Sbjct: 846  LWLCNTPATGIFGIPSLAGLYSLTKLNLKDCN-LEVIPQGIECMVSLVELDLSGNN---- 900

Query: 762  LPELPLC------LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEI-----LLC 810
               LP        L+ L +  C  L   P+LP  +  LT ++C  L+   +I     L  
Sbjct: 901  FSHLPTSISRLHNLKRLRINQCKKLVHFPKLPPRILFLTSKDCISLKDFIDISKVDNLYI 960

Query: 811  LQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHM 870
            ++E++                               NC ++   ANNK           +
Sbjct: 961  MKEVN-----------------------------LLNCYQM---ANNK-------DFHRL 981

Query: 871  AIASLRLGYEMAINEKLSELRGSL-IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLI 929
             I+S+         +K+   +G+  I++PGSEIPDWF+ +  GSS+C++  P +   N+I
Sbjct: 982  IISSM---------QKMFFRKGTFNIMIPGSEIPDWFTTRKMGSSVCMEWDPDAPNTNMI 1032

Query: 930  GFAFCAVL 937
             FA C V+
Sbjct: 1033 RFALCVVI 1040


>gi|15222558|ref|NP_176572.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12325006|gb|AAG52448.1|AC010852_5 putative disease resistance protein; 24665-28198 [Arabidopsis
           thaliana]
 gi|332196042|gb|AEE34163.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1017

 Score =  278 bits (711), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 226/756 (29%), Positives = 350/756 (46%), Gaps = 155/756 (20%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETA----GGLEHLQKQML 62
           V+IV I G  GIGKTT+A+A++   S  F+ SCFV ++RG+  +     G   HLQ+Q L
Sbjct: 208 VKIVAIAGPAGIGKTTIARALYGLLSKRFQLSCFVDNLRGSYHSGFDEYGFKLHLQEQFL 267

Query: 63  STTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           S  L++    +G  I H    KE +   ++LI+LDDVN++ QL+ L  E   FG GSRIV
Sbjct: 268 SKVLNQ----SGMRICHLGAIKENLSDQRVLIILDDVNKLKQLEALANETTWFGPGSRIV 323

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           VTT +K +L++        Y V     E+A +  C++AFK+          S SV     
Sbjct: 324 VTTENKELLQQH--GINNTYHVGFPSDEDALKILCSYAFKQTSPRHGFEELSESVTKLCG 381

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
             PL L V+GSSL  K++  W  V+  L  I +    DI D+L++ +  L    +++FL 
Sbjct: 382 KLPLGLCVVGSSLRGKKEDEWEDVVTRLETILD---QDIEDVLRVGYESLDENAQTLFLH 438

Query: 241 IACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI-----SGNFLNMHDILQEMGR 292
           IA FF  ED D V ++  +S+ DV   L IL ++SL+ +         + MH +LQ+MG+
Sbjct: 439 IAIFFNKEDGDLVKTMFAESDLDVKYGLKILENRSLIKMKIFSNGDTKIVMHRLLQQMGK 498

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTD-AIEGIFLDLSKIKGINLDPRAFTNM 351
           + ++++   EP +R  L D +EI  VL+H KGT   + G+  D+S+I  +++  +AF  M
Sbjct: 499 RAIQKQ---EPWERQILIDAREICHVLEHAKGTGWNVHGMSFDISRISEVSIRKKAFKRM 555

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NL+  K Y  K                  +++ +P  +D+ P  LR L W  YP ++LP
Sbjct: 556 PNLQFLKVYKSK--------------DDGNNRMHVPEEMDF-PCLLRLLDWKAYPSKSLP 600

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
             F P++LVELN+  S++E  W+G +      ++N K                       
Sbjct: 601 PTFNPEHLVELNMHSSQLEYLWQGTQP-----LKNLK----------------------- 632

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
               ++ S   NL + P +S                       T+LE L L GC+ L  I
Sbjct: 633 ---KMDLSQSKNLKQLPDLSNA---------------------TNLEYLYLMGCESLIEI 668

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
            +S   L  L  L  +GC+NLE  P       H+                  NL  L+ +
Sbjct: 669 PSSISHLHKLEMLATVGCINLEVIPA------HM------------------NLESLQTV 704

Query: 592 FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
           ++  CS+L N+P    ++ YL+    A   +   P        L++LD S  +  +    
Sbjct: 705 YLGGCSRLRNIPVMSTNIRYLFITNTAVEGVPLCPG-------LKTLDVSGSRNFKGL-- 755

Query: 652 TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
                     L H+               +SL  L L   + E +P   K + QL+ ++L
Sbjct: 756 ----------LTHLP--------------TSLTTLNLCYTDIERIPDCFKSLHQLKGVNL 791

Query: 712 EDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC 747
                L SLPELP  L  L   DC+ L+++    FC
Sbjct: 792 RGCRRLASLPELPRSLLTLVADDCESLETV----FC 823



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 141/342 (41%), Gaps = 100/342 (29%)

Query: 635 LRSLDSSHCKGLESFP----RTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
           L+ +D S  K L+  P     T L  L  MG       ++ EIP  I++L  LE+L   G
Sbjct: 631 LKKMDLSQSKNLKQLPDLSNATNLEYLYLMGC-----ESLIEIPSSISHLHKLEMLATVG 685

Query: 691 N-NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLE 749
             N E +PA +  +  L+ ++L   + L+++P +   ++YL + +   ++ +P+ P  L+
Sbjct: 686 CINLEVIPAHM-NLESLQTVYLGGCSRLRNIPVMSTNIRYLFITNT-AVEGVPLCP-GLK 742

Query: 750 SLDLTGCNMLR--------SLPELPLC----------------LQYLNLEDCNMLRSLPE 785
           +LD++G    +        SL  L LC                L+ +NL  C  L SLPE
Sbjct: 743 TLDVSGSRNFKGLLTHLPTSLTTLNLCYTDIERIPDCFKSLHQLKGVNLRGCRRLASLPE 802

Query: 786 LPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEF 845
           LP  L  L   +C   +SL  +   L  L AS                         F F
Sbjct: 803 LPRSLLTLVADDC---ESLETVFCPLNTLKAS-------------------------FSF 834

Query: 846 TNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDW 905
            NC KL+ +A   I+  S      M  A                      VLPG E+P  
Sbjct: 835 ANCFKLDREARRAIIQQSFF----MGKA----------------------VLPGREVPAV 868

Query: 906 FSNQSSGSSICIQLP--PHSSCRNLIGFAFCAVLDSKKVDSD 945
           F +++ G S+ I+    P++S      F FC V+ S+   SD
Sbjct: 869 FDHRAKGYSLTIRPDGNPYTS------FVFCVVV-SRNQKSD 903


>gi|15222556|ref|NP_176571.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12325008|gb|AAG52450.1|AC010852_7 putative disease resistance protein; 28811-33581 [Arabidopsis
           thaliana]
 gi|332196041|gb|AEE34162.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1031

 Score =  278 bits (711), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 221/749 (29%), Positives = 351/749 (46%), Gaps = 142/749 (18%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V++VGI G  GIGKTT+A+A+  + S++F+ +CFV +++ +   +     LQ+Q L+ 
Sbjct: 209 DGVKMVGISGPAGIGKTTIARALQSRLSNKFQLTCFVDNLKESFLNSLDELRLQEQFLAK 268

Query: 65  TLSEKLEVAGPNIPH--FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
            L+      G  I H    +ER+ + ++LI+LDDVN + QL+ L  E   FG GSRIVVT
Sbjct: 269 VLNHD----GIRICHSGVIEERLCKQRVLIILDDVNHIMQLEALANETTWFGSGSRIVVT 324

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           T +K +L++    +  +Y V     E+AFE  C +AF++          +R V       
Sbjct: 325 TENKEILQQHGIND--LYHVGFPSDEQAFEILCRYAFRKTTLSHGFEKLARRVTKLCGNL 382

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L VLGSSL  K +  W +V+  L  I + +  DI ++L++ +  L    +S+FL IA
Sbjct: 383 PLGLRVLGSSLRGKNEEEWEEVIRRLETILDHQ--DIEEVLRVGYGSLHENEQSLFLHIA 440

Query: 243 CFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQE 298
            FF   D D V ++  D+  D+   L IL DKSL++IS N  + +H +LQ+ GRQ V +E
Sbjct: 441 VFFNYTDGDLVKAMFTDNNLDIKHGLKILADKSLINISNNREIVIHKLLQQFGRQAVHKE 500

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
              EP K   L    EI  VL++  GT A+ GI  D+S +  + +  ++F  + NLR  K
Sbjct: 501 ---EPWKHKILIHAPEICDVLEYATGTKAMSGISFDISGVDEVVISGKSFKRIPNLRFLK 557

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
            +  +                   +V +P   ++ P++LR LHW+ YP ++LP  F+P+ 
Sbjct: 558 VFKSR--------------DDGNDRVHIPEETEF-PRRLRLLHWEAYPCKSLPPTFQPQY 602

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
           LVEL +  S++E+ WEG         Q   +L  ++    + L+                
Sbjct: 603 LVELYMPSSQLEKLWEG--------TQRLTHLKKMNLFASRHLK---------------- 638

Query: 479 SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
                  E P +S                       T+LE +DL  C+ L  I +SF  L
Sbjct: 639 -------ELPDLSNA---------------------TNLERMDLSYCESLVEIPSSFSHL 670

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
             L  L +  C+NL+  P  +                        NL  LE + +  CS+
Sbjct: 671 HKLEWLEMNNCINLQVIPAHM------------------------NLASLETVNMRGCSR 706

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
           L N+P    ++  LY    + +A+  +P S+   + L  L  S    L+           
Sbjct: 707 LRNIPVMSTNITQLY---VSRTAVEGMPPSIRFCSRLERLSISSSGKLK----------- 752

Query: 659 AMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
             G+ H+                SL+ L L  ++ E++P  IK +  L  ++L     L 
Sbjct: 753 --GITHLP--------------ISLKQLDLIDSDIETIPECIKSLHLLYILNLSGCRRLA 796

Query: 719 SLPELPLCLKYLHLIDCKMLQSLPVLPFC 747
           SLPELP  L++L   DC+ L+++    FC
Sbjct: 797 SLPELPSSLRFLMADDCESLETV----FC 821



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 163/391 (41%), Gaps = 77/391 (19%)

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
           H PE  E    L+ ++ +  P   LP +F+  P   V      S+L+ L +    L +L 
Sbjct: 570 HIPEETEFPRRLRLLHWEAYPCKSLPPTFQ--PQYLVELYMPSSQLEKLWEGTQRLTHLK 627

Query: 614 YI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
            + L A+  + +LP     +N+ R +D S+C+ L                         E
Sbjct: 628 KMNLFASRHLKELPDLSNATNLER-MDLSYCESL------------------------VE 662

Query: 673 IPQEIAYLSSLEILYLSGN-NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
           IP   ++L  LE L ++   N + +PA +  ++ L  +++   + L+++P +   +  L+
Sbjct: 663 IPSSFSHLHKLEWLEMNNCINLQVIPAHM-NLASLETVNMRGCSRLRNIPVMSTNITQLY 721

Query: 732 LIDCKMLQSLPVLPFC--LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLC 789
           +    +    P + FC  LE L ++    L+ +  LP+ L+ L+L D + + ++PE    
Sbjct: 722 VSRTAVEGMPPSIRFCSRLERLSISSSGKLKGITHLPISLKQLDLIDSD-IETIPECIKS 780

Query: 790 LQLLTVRN---CNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFT 846
           L LL + N   C RL SLPE+   L+ L A   E L     +  + P +   A +   FT
Sbjct: 781 LHLLYILNLSGCRRLASLPELPSSLRFLMADDCESL-----ETVFCPLNTPKAEL--NFT 833

Query: 847 NCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWF 906
           NC KL  +A   I+  SLL    +                              E+P  F
Sbjct: 834 NCFKLGQQAQRAIVQRSLLLGTTLLPGR--------------------------ELPAEF 867

Query: 907 SNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
            +Q  G+++ I        R   GF  C V+
Sbjct: 868 DHQGKGNTLTI--------RPGTGFVVCIVI 890


>gi|227438165|gb|ACP30572.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1184

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 272/880 (30%), Positives = 403/880 (45%), Gaps = 122/880 (13%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-----L 57
             SD V+++GIWG  GIGKTT+A+  F+Q S+ F+ S F+ D++ NS      ++     L
Sbjct: 251  GSDEVRMIGIWGPPGIGKTTIARVAFNQLSNSFQLSVFMDDLKANSSRLCSDDYSVKLQL 310

Query: 58   QKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
            Q+Q +S     K  V    + HF     R+R  K+L+VLD VN   QL  +  E   FG 
Sbjct: 311  QQQFMSQITDHKDMV----VSHFGVVSNRLRDKKVLVVLDGVNRSVQLDAMAKETWWFGP 366

Query: 116  GSRIVVTTRDKRVLEKFRGEE-KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSRI++TT+D+++   FR      IY VN    +EA + FC + F +N         +R 
Sbjct: 367  GSRIIITTQDQKL---FRAHGINHIYEVNLPTNDEALQIFCTYCFGQNFPKYGFEELARE 423

Query: 175  VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
            V S +   PL L V+GS L    K  W    + L R+ +S   DI  ILK S++ L    
Sbjct: 424  VTSLSGELPLGLRVMGSYLRGMSKEDW---TNSLPRLRDSLDTDIQSILKFSYDALDDED 480

Query: 235  KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMG 291
            K +FL IACFF  E    +   L      V   L +L +KSL+SI    + MH +L+++G
Sbjct: 481  KDLFLHIACFFSSEQIHKMEEHLAKRFLYVRQRLKVLAEKSLISIDSGRIRMHSLLEKLG 540

Query: 292  RQIVRQESEKEPGKRSRLWDPKEISRVLKHNK-GTDAIEGIFLDLSKIK-GINLDPRAFT 349
            R+IV ++S  EPG+R  L+D ++I  VL     G+ ++ GI  +  +I+  I++  +AF 
Sbjct: 541  REIVCKQSIHEPGQRQFLYDKRDICEVLTGGATGSKSVIGIKFEYYRIREEIDISEKAFE 600

Query: 350  NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
             MSNL+  K  V  F +                 +Q+  GL+YL  KLR L W  +P+  
Sbjct: 601  GMSNLQFLK--VCGFTD----------------ALQITGGLNYLSHKLRLLEWRHFPMTC 642

Query: 410  LPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY---------------LSALS 454
            LP     + LVEL +  SK+E+ WEG K        +  Y               L  L 
Sbjct: 643  LPCTVNLEFLVELVMPYSKLEKLWEGCKPLRCLKWMDLGYSVNLKELPDLSTATNLEKLY 702

Query: 455  FKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLY-LGQSAIE---EVPSS 510
               C SL   PS +       +N   C +L+EFP   G    L  L  S+     E+PS 
Sbjct: 703  LYDCSSLVKLPS-MSGNSLEKLNIGGCSSLVEFPSFIGNAVNLQELDLSSFPNLLELPSY 761

Query: 511  IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP-----EILEKME-- 563
            +   T+LE LDLR C  +  +  S   L+ L  L L GC  LE  P     E L +++  
Sbjct: 762  VGNATNLEYLDLRNCLNMVELPLSLRNLKKLKRLRLKGCSKLEVLPTNINLEYLNELDIA 821

Query: 564  -----------------HLKRIYSDRTP-ITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
                             +L+ +     P + E+PS   N   LE L +  CSKL  LP  
Sbjct: 822  GCSSLDLGDFSTIGNAVNLRELNISSLPQLLEVPSFIGNATNLENLVLSSCSKLVELPLF 881

Query: 606  IGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLH 664
            IG+L+ L ++ L     +  LP+++ L ++L     S C  L+SFP+             
Sbjct: 882  IGNLQKLRWLRLEGCIRLEVLPTNINLESLLELN-LSDCSMLKSFPQ------------- 927

Query: 665  ISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
            IS              ++LE L L G   E +P  I+    L+ +H+  F  L+  P   
Sbjct: 928  IS--------------TNLEKLNLRGTAIEQVPPSIRSWPHLKELHMSYFENLKEFPHAL 973

Query: 725  LCLKYLHLIDCKMLQSLPVLPFCLESLD---LTGCNMLRSLPELPLCLQYLNLEDCNMLR 781
              +  L L D + +Q +P L   +  L+   L+GC  L  LP +      +   DC+ L 
Sbjct: 974  ERITSLSLTDTE-IQEVPPLVKQISRLNRFFLSGCRKLVRLPPISESTHSIYANDCDSLE 1032

Query: 782  SLPELPLCLQL--LTVRNCNRLQSLPEILLCLQELDASVL 819
             L E     Q+  LT  NC +L      L+     + +VL
Sbjct: 1033 IL-ECSFSDQIRRLTFANCFKLNQEARDLIIQASSEHAVL 1071


>gi|356561214|ref|XP_003548878.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1320

 Score =  276 bits (707), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 244/761 (32%), Positives = 355/761 (46%), Gaps = 108/761 (14%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V +VGI G+ G+GKTTLA A+++  +  FE SCF+ +VR  +    GLE LQ   LS 
Sbjct: 208 DVVHMVGIHGLAGVGKTTLAVAVYNSIADHFESSCFLENVR-ETTNKKGLEDLQSAFLSK 266

Query: 65  TLSE-KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
           T  E KL      I    K ++++ K+L++LDDV+E  QL+ +IG  D FG+GSR+++TT
Sbjct: 267 TAGEIKLTNWREGIT-IIKCKLKQKKVLLILDDVDEHKQLQAIIGSPDWFGRGSRVIITT 325

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS--RSVVSYTKG 181
           RD+ +L       K  Y+V  L  + A +   + AF E     D ++H      ++Y  G
Sbjct: 326 RDEHLLALHNV--KITYKVRELNEKHALQLLTHKAF-ELEKEVDPSYHDILNRAITYASG 382

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL LEV+GS+L  K    W   L    RI + +I   YDILK+S++ L    K+IFLDI
Sbjct: 383 LPLALEVIGSNLLEKSIEEWESALDGYERIPDKKI---YDILKVSYDALNEDEKNIFLDI 439

Query: 242 ACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISGNF----LNMHDILQEMGRQ 293
           AC F+     E +D + +         + +L+ KSL++I G++    + +HD++++MG++
Sbjct: 440 ACCFKAYKLEELQDILYAHYGHCMKYHIGVLVKKSLINIHGSWDYKVMRLHDLIEDMGKE 499

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMS 352
           IVR+ES   PGKRSRLW  ++I++VL+ NKGT  IE I ++ S   + +  D  AF  M 
Sbjct: 500 IVRRESPTNPGKRSRLWSHEDINQVLQENKGTSKIEIICMNFSSFGEEVEWDGDAFKKMK 559

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NL+        F E                      G  +LP  LR L W   P +  P 
Sbjct: 560 NLKTLIIKSDCFSE----------------------GPKHLPNTLRVLEWWRCPSQDWPH 597

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP-----SN 467
           NF PK L    L  S             P   +    L++L    C SL   P     SN
Sbjct: 598 NFNPKQLAICKLPDSSFTSV-----GLAPLFEKRLVNLTSLILDECDSLTEIPDVSCLSN 652

Query: 468 LHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKR 527
           L       ++F  C NL                      +  S+  L  L++LD   C  
Sbjct: 653 LE-----NLSFRKCRNLF--------------------TIHHSVGLLEKLKILDAECCPE 687

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
           LK  S    KL SL    L  C++LE FPEIL KME++ ++     PIT+LP SF NL  
Sbjct: 688 LK--SFPPLKLTSLERFELWYCVSLESFPEILGKMENITQLCLYECPITKLPPSFRNLTR 745

Query: 588 LEVLFVEDCSKLDNLPD--------NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
           L  L +    + + L D        NI  +  L  I A       LP  V        L 
Sbjct: 746 LRSLSLGHHHQTEQLMDFDAATLISNICMMPELDGISADNLQWRLLPEDVL------KLT 799

Query: 640 SSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAI 699
           S  C  ++S              L +SD     +P  ++   ++  L LSG+ F  +P  
Sbjct: 800 SVVCSSVQSLT------------LKLSDEL---LPLFLSCFVNVIDLELSGSEFTVIPEC 844

Query: 700 IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           IK+   L  + L+  + LQ +  +P  LK    +D   L S
Sbjct: 845 IKECRFLSTLTLDRCDRLQEIRGIPPNLKTFSAMDSPALTS 885


>gi|357513265|ref|XP_003626921.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355520943|gb|AET01397.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 2300

 Score =  276 bits (707), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 204/584 (34%), Positives = 300/584 (51%), Gaps = 69/584 (11%)

Query: 9    IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL-S 67
            +VGIWGMGGIGK+T+AK I++   +EFE   F++++R   E   G   LQ+Q LS  L +
Sbjct: 1382 LVGIWGMGGIGKSTIAKVIYNDLCYEFENQSFLANIREVWEKDRGRIDLQEQFLSDILKT 1441

Query: 68   EKLEV-AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
             K++V +        K+++R  ++L VLDDV+E+ Q   L  + +  G GS I++TTRD 
Sbjct: 1442 RKIKVLSVEQGKTMIKQQLRAKRILAVLDDVSELEQFDALC-QRNSVGPGSIIIITTRDL 1500

Query: 127  RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVL 186
            RVL     E   IY    L   E+ E FC  AF++    +D    SR VV+Y  G PL L
Sbjct: 1501 RVLNIL--EVDFIYEAEELNASESLELFCKHAFRKAIPTQDFLILSRDVVAYCGGIPLAL 1558

Query: 187  EVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFLDIACFF 245
            EVLGS L  ++K  W  VL  L +I   +IH+I   LKISF+ L  R+ K+IFLD+ CFF
Sbjct: 1559 EVLGSYLFKRKKQEWRSVLSKLEKIPNDQIHEI---LKISFDGLKDRMEKNIFLDVCCFF 1615

Query: 246  EGEDKDFVASILDDS--ESDV-LDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQESEK 301
             G+D+ +V  IL+     +D+ + +LI++SL+ +  N  L MH +L++MGR+IVR+ S +
Sbjct: 1616 IGKDRAYVTKILNGCGLNADIGITVLIERSLIKVEKNKKLGMHALLRDMGREIVRESSPE 1675

Query: 302  EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
            EP K +RLW  +++  VL    GT AIEG+ + L K   +  D  AF  M  LRL +   
Sbjct: 1676 EPEKHTRLWCHEDVVNVLADYTGTKAIEGLVMKLPKTNRVCFDTIAFEKMIRLRLLQL-- 1733

Query: 362  PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVE 421
                                  VQ+       PK LR+L W  +PL+  P NF  KNLV 
Sbjct: 1734 --------------------DNVQVIGDYKCFPKHLRWLSWQGFPLKYTPENFYQKNLVA 1773

Query: 422  LNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC 481
            + L+ S + Q W+      P  I+  K L                          N S+ 
Sbjct: 1774 MELKHSNLAQVWKK-----PQLIEGLKIL--------------------------NLSHS 1802

Query: 482  VNLIEFPQISG--KVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
             NL   P  S    + +L +    ++ EV  SI  L +L +L+L+ C  L  +     +L
Sbjct: 1803 KNLKRTPDFSKLPNLEKLIMKDCQSLLEVHPSIGDLKNLLMLNLKDCTSLGNLPREIYQL 1862

Query: 539  RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
            R + TLIL GC  ++   E + +ME L  + +  T + + P S 
Sbjct: 1863 RRVETLILSGCSKIDKLEEDIVQMESLTTLMAANTGVKQPPFSI 1906



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 435  GEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
            G+  C P      K+L  LS++G   L+  P N            Y  NL+         
Sbjct: 1740 GDYKCFP------KHLRWLSWQGF-PLKYTPENF-----------YQKNLVA-------- 1773

Query: 495  TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL-E 553
              + L  S + +V    + +  L++L+L   K LKR +  F KL +L  LI+  C +L E
Sbjct: 1774 --MELKHSNLAQVWKKPQLIEGLKILNLSHSKNLKR-TPDFSKLPNLEKLIMKDCQSLLE 1830

Query: 554  HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
              P I +    L     D T +  LP     L  +E L +  CSK+D L ++I  +E L 
Sbjct: 1831 VHPSIGDLKNLLMLNLKDCTSLGNLPREIYQLRRVETLILSGCSKIDKLEEDIVQMESLT 1890

Query: 614  YILAAASAISQLPSSVALSNML 635
             ++AA + + Q P S+  S  +
Sbjct: 1891 TLMAANTGVKQPPFSIVRSKSI 1912


>gi|297791249|ref|XP_002863509.1| hypothetical protein ARALYDRAFT_916982 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309344|gb|EFH39768.1| hypothetical protein ARALYDRAFT_916982 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1133

 Score =  276 bits (707), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 213/686 (31%), Positives = 343/686 (50%), Gaps = 72/686 (10%)

Query: 1   MDSSDT-VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQK 59
           +D  DT   I GI GM GIGKTT+ K + +++  +F    FV  +R  S  +        
Sbjct: 224 LDIKDTRTLITGIVGMPGIGKTTMLKELIEKWKGKFSRHAFVDRIREKSYNS------DL 277

Query: 60  QMLSTTLSEKL--EVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ-- 115
           + L+ +L EKL  E+  P +   TK ++R+ K+L+VLDDV+E  Q+  L+G  D   Q  
Sbjct: 278 ECLTISLFEKLLPELNNPQVDSITKGQLRKRKVLVVLDDVSEREQIYALLGIYDLQNQHE 337

Query: 116 ----GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHC-PEDLNW 170
               GSRI + T D  +LE   G     Y V  L  ++  + F + AF  N   PED   
Sbjct: 338 WISDGSRIFIATNDMSLLE---GLVHDTYVVRQLNHKDGMDLFHHHAFGTNQAIPEDRIK 394

Query: 171 HSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
            S   V Y +G+PL L++LG+ LC K   HW   L  L +  ++ I  +   +++S+N+L
Sbjct: 395 LSDEFVHYARGHPLALKILGTELCEKDMKHWETKLKILAQKPKTYIRQV---VQVSYNEL 451

Query: 231 TPRVKSIFLDIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNFLNMHDIL 287
           +   K  FLDIACF   +D D+V S+L   D   ++ + +L +K L+      + MHD++
Sbjct: 452 SSEQKDAFLDIACF-RSQDVDYVESLLVSSDPGSAEAIQVLKNKFLIDTCDGRVEMHDLV 510

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISR-----VLKHNKGTDAIEGIFLDLSKIKG-I 341
               R++      K   K+ RLW  ++I +     +L++  G   + G+FLDLS+++  I
Sbjct: 511 HTFSRKL----DLKGGSKQRRLWRHEDIVKERTVNLLQNRIGAANVRGVFLDLSEVQDEI 566

Query: 342 NLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLH 401
           +LD      M NLR  KFY           S   +E  + +K+ +P+ L+   K++R  H
Sbjct: 567 SLDREHLKKMRNLRYLKFY----------NSHCHQECKTNAKINIPDELELPLKEVRCFH 616

Query: 402 WDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY------------ 449
           W  +PL+ +P++F P NLV+L L  SK+E+ W+G K        +  +            
Sbjct: 617 WLKFPLKEVPNDFNPINLVDLKLPFSKIERLWDGVKDTPVLKWVDLNHSSLLSSLSGLSK 676

Query: 450 ---LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEE 506
              L  L+ +GC SL S   ++      T+  S C +  EFP I   +  L+L ++AI +
Sbjct: 677 APNLQGLNLEGCTSLESL-GDVDSKSLKTLTLSGCTSFKEFPLIPENLEALHLDRTAISQ 735

Query: 507 VPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLK 566
           +P +I  L  L +L ++ CK L+ I T   +L +L  L+L GCL L+ FP I      LK
Sbjct: 736 LPDNIVNLKKLVLLTMKDCKMLENIPTEVDELTALQKLVLSGCLKLKEFPAI--NKSPLK 793

Query: 567 RIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQL 625
            ++ D T I  +P     LP ++ L++    ++  LP  I  L  L ++ L    +++ +
Sbjct: 794 ILFLDGTSIKTVP----QLPSVQYLYLSRNDEISYLPAGINQLFQLTWLDLKYCKSLTSI 849

Query: 626 PSSVALSNMLRSLDSSHCKGLESFPR 651
           P    L   L  LD+  C  L++  +
Sbjct: 850 PE---LPPNLHYLDAHGCSSLKTVAK 872



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 205/481 (42%), Gaps = 84/481 (17%)

Query: 586  PGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC-- 643
            P L+ L +E C+ L++L D + S       L+  ++  + P       +  +L++ H   
Sbjct: 678  PNLQGLNLEGCTSLESLGD-VDSKSLKTLTLSGCTSFKEFPL------IPENLEALHLDR 730

Query: 644  KGLESFPRTFLLGLSAMGLLHISDYAVRE-IPQEIAYLSSLEILYLSGN-NFESLPAIIK 701
              +   P   ++ L  + LL + D  + E IP E+  L++L+ L LSG    +  PAI K
Sbjct: 731  TAISQLPDN-IVNLKKLVLLTMKDCKMLENIPTEVDELTALQKLVLSGCLKLKEFPAINK 789

Query: 702  QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPV---LPFCLESLDLTGCNM 758
               ++ F+   D   ++++P+LP  ++YL+L     +  LP      F L  LDL  C  
Sbjct: 790  SPLKILFL---DGTSIKTVPQLP-SVQYLYLSRNDEISYLPAGINQLFQLTWLDLKYCKS 845

Query: 759  LRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASV 818
            L S+PELP  L YL+   C+ L+++ + PL   L TV+N                     
Sbjct: 846  LTSIPELPPNLHYLDAHGCSSLKTVAK-PLARILPTVQN--------------------- 883

Query: 819  LEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLG 878
                                    F FTNC KL   A ++I   S  + + ++ A  R  
Sbjct: 884  ---------------------HCSFNFTNCCKLEQAAKDEITLYSQRKCQLLSYA--RKH 920

Query: 879  YEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLD 938
            Y    N  LS         PG E+P WF +++ GS +  +LPPH   + L G + CAV+ 
Sbjct: 921  Y----NGGLSSEALFSTCFPGCEVPSWFCHEAVGSLLGRKLPPHWHEKKLSGISLCAVV- 975

Query: 939  SKKVDSDCFRYFYVSFQFDLEIKTLSE---TKHVDLGYNSRYIEDLIDSDRVILGFKP-- 993
            S     +    F V+  F+++ +  S    T  V         +D I+SD V + +    
Sbjct: 976  SFPAGQNQISSFSVTCTFNIKAEDKSWIPFTCPVGSWTRDGDKKDKIESDHVFIAYITCP 1035

Query: 994  ----CLNVGFPDGYHHTIATFKFFAERKF-----YKIKRCGLCPVYANPSETKDNTFTIN 1044
                CL     +  + T A+ +F           +K+ RCGL  VY    + K+++  + 
Sbjct: 1036 HTIRCLEDENSNKCNFTEASLEFTVTGDTGVIGKFKVLRCGLSLVYEK-DKNKNSSHEVK 1094

Query: 1045 F 1045
            F
Sbjct: 1095 F 1095


>gi|297850934|ref|XP_002893348.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339190|gb|EFH69607.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1488

 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 254/823 (30%), Positives = 383/823 (46%), Gaps = 75/823 (9%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S+  VQI+G++GMGGIGKTTLAK+ +++    F+   F+  VR  S    GL +LQK ++
Sbjct: 307  STSGVQILGLYGMGGIGKTTLAKSFYNKIIVNFKHRVFIESVREKSSDQDGLVNLQKTLI 366

Query: 63   ST--TLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
                 L  ++E     +    KE V   K ++VLDDV+ + Q+  L+GE   +G+GS IV
Sbjct: 367  KELFGLVPEIEDVSRGLEKI-KENVHEKKTIVVLDDVDHIDQVNALVGETKWYGEGSLIV 425

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVSYT 179
            +TTRD  +L K    ++  Y V  L   +A + F  ++ ++   P + L   S+ +   T
Sbjct: 426  ITTRDSEILSKLSVNQQ--YEVKCLTEPQALKLFSFYSLRKEKPPTQSLLELSKKIAEVT 483

Query: 180  KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
               PL ++V GS L  K ++ W     +L ++  ++   ++ +L +SF  L    K IFL
Sbjct: 484  GLLPLAVKVFGSHLYDKDENEWPV---ELEKLTNTQPDKLHCVLALSFESLDDEEKKIFL 540

Query: 240  DIACFFEGED--KDFVASILDD---SESDVLDILIDKSLVSI-SGNFLNMHDILQEMGRQ 293
            DIAC F   +  KD +  IL     +    L +LI KSLV+I + + L MHD +++MGRQ
Sbjct: 541  DIACLFLKMEITKDELVDILKGCGFNAEAALRVLIQKSLVTIMTDDTLWMHDQIRDMGRQ 600

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK--IKGINLDPRAFTNM 351
            +V +E   +P  RSRLWD  EI  VL + KGT +I GI  D  K  ++    D     N+
Sbjct: 601  MVLRECSDDPEMRSRLWDRGEIMNVLDYMKGTSSIRGIVFDFKKKFVRDPTADEIVSRNL 660

Query: 352  SN---------------LRLFKFYVPKFYEI----EKLPSMSTEEQLSYSKVQLPNGLDY 392
             N               +R      PK  EI    E    M     L  + V+L   L  
Sbjct: 661  RNNPGINSVCNYLRNIFIRFPAEEKPKRSEITIPVEPFVPMKKLRLLQINNVELEGNLKL 720

Query: 393  LPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSA 452
            LP +L+++ W   PL  LP +   + L  L+L  S V       +     S +  + L  
Sbjct: 721  LPSELKWIQWKGCPLENLPPDILARQLGVLDLSESGVR------RVQTLRSKKGDENLKV 774

Query: 453  LSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIE 512
            ++ +GC SL + P   + +    +    C  L+       KV R             S+ 
Sbjct: 775  VNLRGCHSLEAIPDLSNHIALEKLVLERCNLLV-------KVHR-------------SVG 814

Query: 513  CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR 572
             L  L  LDLR C  L         L+ L  L L GC NL   PE +  M  LK +  D 
Sbjct: 815  NLGKLLQLDLRRCSSLSEFLVDVSGLKCLEKLFLTGCSNLSVLPENIGSMPLLKELLLDG 874

Query: 573  TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALS 632
            T I+ LP S   L  LE L +  C  +  LP  IG L  L  +    +A+  LP S+   
Sbjct: 875  TAISNLPDSIFRLQKLEKLSLMGCRSIQELPSCIGKLTSLEDLYLDDTALRNLPISIGDL 934

Query: 633  NMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNN 692
              L+ L    C  L   P + +  L ++  L I+  AV E+P +   L  L+ L      
Sbjct: 935  KNLQKLHLMRCTSLSKIPDS-INKLISLKELFINGSAVEELPLDTGSLLCLKDLSAGDCK 993

Query: 693  F-ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY---LHLIDCKMLQSLPVLPF-- 746
            F + +P+ I  ++ L  + L     +++LP+    L +   L LI+CK L+ LP      
Sbjct: 994  FLKQVPSSIGGLNSLLQLQLNG-TPIEALPKEIGALHFIRKLELINCKFLKRLPNSIGDM 1052

Query: 747  -CLESLDLTGCNMLRSLPELPLCLQY---LNLEDCNMLRSLPE 785
              L SL+L G N +  LPE    L+    L + +C ML+ LP+
Sbjct: 1053 DTLYSLNLVGSN-IEELPEDFGKLENLVELRMSNCKMLKRLPK 1094



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 221/506 (43%), Gaps = 79/506 (15%)

Query: 338  IKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKL 397
            +K + LD  A +N+ +       + +  ++EKL  M        S  +LP+ +  L   L
Sbjct: 867  LKELLLDGTAISNLPD------SIFRLQKLEKLSLMGCR-----SIQELPSCIGKL-TSL 914

Query: 398  RYLHWDTYPLRTLPSNFKP-KNLVELNL-RCSKVEQPWEGEKACVPSSIQNFKYLSALSF 455
              L+ D   LR LP +    KNL +L+L RC+ + +        +P SI     L  L  
Sbjct: 915  EDLYLDDTALRNLPISIGDLKNLQKLHLMRCTSLSK--------IPDSINKLISLKELFI 966

Query: 456  KGCQSLRSFPSNL-HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ---SAIEEVPSSI 511
             G  ++   P +    +C   ++   C  L + P   G +  L   Q   + IE +P  I
Sbjct: 967  NG-SAVEELPLDTGSLLCLKDLSAGDCKFLKQVPSSIGGLNSLLQLQLNGTPIEALPKEI 1025

Query: 512  ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YS 570
              L  +  L+L  CK LKR+  S   + +L +L L+G  N+E  PE   K+E+L  +  S
Sbjct: 1026 GALHFIRKLELINCKFLKRLPNSIGDMDTLYSLNLVGS-NIEELPEDFGKLENLVELRMS 1084

Query: 571  DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA 630
            +   +  LP SF +L  L  L++++ S +  LPDN G+L  L  +               
Sbjct: 1085 NCKMLKRLPKSFGDLKSLHRLYMQETS-VAELPDNFGNLSNLMVL-------------KM 1130

Query: 631  LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR------EIPQEIAYLSSLE 684
            L   LR    S   G    PR   L  S   LL + +   R      ++  ++  LSSL 
Sbjct: 1131 LKKPLRRSSESEAPGTSEEPRFVELPHSFSNLLSLEELDARSWRISGKMRDDLEKLSSLM 1190

Query: 685  ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
            IL L  N F SLP+ +  +S L+              EL LC       DC+ L+ LP L
Sbjct: 1191 ILNLGNNYFHSLPSSLVGLSNLK--------------ELLLC-------DCRELKGLPPL 1229

Query: 745  PFCLESLDLTGCNMLRSLPELP--LCLQYLNLEDCNMLRSLPELP--LCLQLLTVRNCNR 800
            P+ LE L+L  C  L S+ +L     L  LNL +C  +  +P L     L+ L +  CN 
Sbjct: 1230 PWKLEQLNLENCFSLDSIFDLSKLKILHELNLTNCVKVVDIPGLEHLTALKKLYMSGCNS 1289

Query: 801  LQSLPEILLCLQELDASVLEKLSKHS 826
              S P      ++   +V ++LSK S
Sbjct: 1290 SCSFPR-----EDFIHNVKKRLSKAS 1310



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 173/657 (26%), Positives = 263/657 (40%), Gaps = 111/657 (16%)

Query: 440  VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL-- 497
            +P SI   + L  LS  GC+S++  PS              C+         GK+T L  
Sbjct: 880  LPDSIFRLQKLEKLSLMGCRSIQELPS--------------CI---------GKLTSLED 916

Query: 498  -YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG-------- 548
             YL  +A+  +P SI  L +L+ L L  C  L +I  S  KL SL  L + G        
Sbjct: 917  LYLDDTALRNLPISIGDLKNLQKLHLMRCTSLSKIPDSINKLISLKELFINGSAVEELPL 976

Query: 549  ---------------CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
                           C  L+  P  +  +  L ++  + TPI  LP     L  +  L +
Sbjct: 977  DTGSLLCLKDLSAGDCKFLKQVPSSIGGLNSLLQLQLNGTPIEALPKEIGALHFIRKLEL 1036

Query: 594  EDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF 653
             +C  L  LP++IG ++ LY +    S I +LP        L  L  S+CK L+  P++F
Sbjct: 1037 INCKFLKRLPNSIGDMDTLYSLNLVGSNIEELPEDFGKLENLVELRMSNCKMLKRLPKSF 1096

Query: 654  LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFE--SLPAIIKQMSQLRFIHL 711
               L ++  L++ + +V E+P     LS+L +L +        S         + RF+ L
Sbjct: 1097 G-DLKSLHRLYMQETSVAELPDNFGNLSNLMVLKMLKKPLRRSSESEAPGTSEEPRFVEL 1155

Query: 712  -EDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQ 770
               F+ L SL EL         I  KM   L  L   L  L+L G N   SLP   + L 
Sbjct: 1156 PHSFSNLLSLEELD---ARSWRISGKMRDDLEKLS-SLMILNL-GNNYFHSLPSSLVGLS 1210

Query: 771  YLN---LEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSP 827
             L    L DC  L+ LP LP  L+ L + NC  L S+          D S L+ L +   
Sbjct: 1211 NLKELLLCDCRELKGLPPLPWKLEQLNLENCFSLDSI---------FDLSKLKILHE--- 1258

Query: 828  DLQWAPESLKSAAICFEFTNCLK---LNGKANNKILADSLLRIRHMAIASLRLGYEMAIN 884
                              TNC+K   + G  +   L    +   + + +  R  +   + 
Sbjct: 1259 ---------------LNLTNCVKVVDIPGLEHLTALKKLYMSGCNSSCSFPREDFIHNVK 1303

Query: 885  EKLSELRGSLI---VLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKK 941
            ++LS+    ++    LPG+ +PDWFS       +     P+   R +I  A    L  KK
Sbjct: 1304 KRLSKASLKMLRNLSLPGNRVPDWFSQ----GPVTFSAQPNRELRGVI-LAVVVALKHKK 1358

Query: 942  VDSDCFRYFYVSFQFDLEIKTLSE---TKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVG 998
             D D ++   V  +   +I  L     T  + L    R  +D +   R   GF P + + 
Sbjct: 1359 ED-DEYQLPDV-LEVQAQIHKLDHHICTHTLQLSGVPRKSDDQLHICRYS-GFHPLVTM- 1414

Query: 999  FPDGYHHTIATFKFFAE-RKFYKIKRCGLCPVYANPSE--TKDNTFTINFATEVWKL 1052
              DGY  TI   K     +K  ++K  G+  VY    +   K++T T  + T   KL
Sbjct: 1415 LKDGY--TIQVIKRNPPIKKGVELKMHGIHLVYEGDDDFPDKEDTITETYLTVSQKL 1469


>gi|227438255|gb|ACP30617.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1297

 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 230/739 (31%), Positives = 356/739 (48%), Gaps = 91/739 (12%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSD--VRGNSETAGGLE----HL 57
            S  V++VGIWG  GIGKTT+A+A+F   S++F+ S F+    +  + E  G       ++
Sbjct: 291  SKEVKMVGIWGTSGIGKTTIARALFCNISNQFQRSVFIDRAFISKSVEVYGRANPVDYNM 350

Query: 58   QKQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            + ++    LSE LE     I    +ER++  K+LIV+DD+++   L  L G+   FG GS
Sbjct: 351  KLRLRMNFLSEILERKNMKIGAM-EERLKHQKVLIVIDDLDDQYVLDALAGQTKWFGSGS 409

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI+V T DK++L K  G +  IY V     E+A E FC  AF+++  P+ L   +  VV 
Sbjct: 410  RIIVVTTDKQLL-KAHGIDS-IYEVGLPSDEQALEMFCRSAFRQDSPPDGLMEFASEVVE 467

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                 PL L+VLGSSL   R  +    L+ L R+  S    I + L++ ++ L    K+I
Sbjct: 468  CAGSLPLGLDVLGSSL---RGLNKEDCLNMLPRLRRSLDGKIEETLRVGYDGLLGEDKAI 524

Query: 238  FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQI 294
            F  IAC F   D   +   L DSE DV   L+ L++KSL+ +    + MH +LQEMGR +
Sbjct: 525  FRHIACLFNHVDVKDIKLFLADSELDVDIGLNNLVNKSLIQVRWGKVEMHHLLQEMGRNV 584

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            V  +S K+P KR  L D K+I  VL  + GT  + GI L++ +I  + +   AF  M NL
Sbjct: 585  VWLQSIKKPQKREFLVDSKDICDVLSESIGTSKLLGISLNVDEIDELQVHETAFKGMRNL 644

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
               + Y  K   +            +  K++LP   D+LP KL+ L W  YP+R +PS  
Sbjct: 645  HFLEIYSNKVRVV------------NGDKLKLPKSFDWLPPKLKLLCWSGYPMRCMPSTL 692

Query: 415  KPKNLVELNLRCSKVEQPWEGE----------------------------------KAC- 439
                LV+L +R SK+E+ W+G                                   ++C 
Sbjct: 693  CTDRLVKLKMRNSKLERLWKGVMSLTCLIEMDLCGSHDLKEIPDLTTATNLETLNLQSCR 752

Query: 440  ----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT 495
                +PSSI+N   L  L  + C+ L++ P+ ++      IN S+C  L  FP+IS  ++
Sbjct: 753  SLVELPSSIRNLNKLIKLDMQFCKKLKTLPTGINLKSLDHINLSFCSQLRTFPKISTNIS 812

Query: 496  RLYLGQSAIEEVPSSIEC--LTDLEVLDLRGCKRLKRIS--TSFCKLRS--LVTLILLGC 549
             L+L ++++ E P+++    L  L +  +   K+ K     T F  + S  L  L L   
Sbjct: 813  YLFLEETSVVEFPTNLHLKNLVKLHMSKVTTNKQWKMFQPLTPFMPMLSPTLTELYLFNI 872

Query: 550  LNLEHFPEILEKMEHLKRIYSDR-TPITELPSSFENLPGLEVLFVEDCSKLDNLPD---N 605
             +L   P     +  L+ +   R T +  LP+   NL  LE L    CS+L   P+   N
Sbjct: 873  PSLVELPSSFRNLNKLRDLKISRCTNLETLPTGI-NLKSLESLDFTKCSRLMTFPNISTN 931

Query: 606  IGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE-------SFPRTFLLGLS 658
            I  L   Y      +AI ++P  V + + L++L+   C  LE         PR   +  S
Sbjct: 932  ISVLNLSY------TAIEEVPWWVEIFSKLKNLNMECCSKLEYVHPNISKLPR-LAVDFS 984

Query: 659  AMGLLHISDYAVREIPQEI 677
                L+I+D + R    E+
Sbjct: 985  HCEALNIADLSSRTSSSEL 1003



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 115/475 (24%), Positives = 192/475 (40%), Gaps = 114/475 (24%)

Query: 507  VPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILE--KMEH 564
            +PS++ C   L  L +R  K L+R+      L  L+ + L G  +L+  P++     +E 
Sbjct: 688  MPSTL-CTDRLVKLKMRNSK-LERLWKGVMSLTCLIEMDLCGSHDLKEIPDLTTATNLET 745

Query: 565  LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQ 624
            L  + S R+ + ELPSS  NL  L  L ++ C KL  LP  I                  
Sbjct: 746  LN-LQSCRS-LVELPSSIRNLNKLIKLDMQFCKKLKTLPTGIN----------------- 786

Query: 625  LPSSVALSNMLRSLDS---SHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLS 681
                      L+SLD    S C  L +FP+      + +  L + + +V E P  + +L 
Sbjct: 787  ----------LKSLDHINLSFCSQLRTFPKIS----TNISYLFLEETSVVEFPTNL-HLK 831

Query: 682  SLEILYLSG-------NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC------LK 728
            +L  L++S          F+ L   +  +S      L  FN + SL ELP        L+
Sbjct: 832  NLVKLHMSKVTTNKQWKMFQPLTPFMPMLSP-TLTELYLFN-IPSLVELPSSFRNLNKLR 889

Query: 729  YLHLIDCKMLQSLP--VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPEL 786
             L +  C  L++LP  +    LESLD T C+ L + P +   +  LNL       ++ E+
Sbjct: 890  DLKISRCTNLETLPTGINLKSLESLDFTKCSRLMTFPNISTNISVLNLS----YTAIEEV 945

Query: 787  PLCLQL------LTVRNCNRLQ-------SLPEILLCLQELDASVLEKLSKHSPDLQWAP 833
            P  +++      L +  C++L+        LP + +     +A  +  LS  +   +   
Sbjct: 946  PWWVEIFSKLKNLNMECCSKLEYVHPNISKLPRLAVDFSHCEALNIADLSSRTSSSELIT 1005

Query: 834  ESLKSAAICFE-----------FTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMA 882
            ++  S  +  E           F N  K N         D LL+        L +G++  
Sbjct: 1006 DASNSDTVSEESSSDKFIPKVGFINYFKFN--------QDVLLQ-------QLSVGFK-- 1048

Query: 883  INEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
                      S+  L G  +P +F++ ++ SS+ I L   S  +    F  CAV+
Sbjct: 1049 ----------SMTFL-GEAVPSYFTHHTTESSLTIPLLDTSLTQTFFRFKVCAVV 1092


>gi|105923326|gb|ABF81471.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1368

 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 230/747 (30%), Positives = 360/747 (48%), Gaps = 122/747 (16%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           + ++ V IVGI GM GIGKTT+AK +FD+   EFEGS F+ +V+  SE+   +  LQKQ+
Sbjct: 313 NGTEKVCIVGIHGMPGIGKTTIAKEVFDKLCDEFEGSSFLLNVKEKSESKD-MVLLQKQL 371

Query: 62  LSTTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           L   L +  E    N+       KER+   ++L+V+DDV    QL  L+GE    G GSR
Sbjct: 372 LHDILRQNTEKIN-NVDRGKVLIKERLPHKRVLVVVDDVARPDQLLDLMGEPSWLGPGSR 430

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRD+ +L     E  + Y+V  L  + + + FC  AF++    +D    S  VV Y
Sbjct: 431 VIITTRDESLLL----EADQRYQVQELNRDNSLQLFCRHAFRDTKPAKDYVELSNDVVEY 486

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSI 237
             G PL L+VLGS L  K ++ W  V+  L +   SEI      L+ISF+ L    +K+ 
Sbjct: 487 CGGLPLALKVLGSCLYGKNQARWESVIDRLRKFPNSEIQKK---LRISFDTLDESTLKNT 543

Query: 238 FLDIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSIS-GNFLNMHDILQEMGR 292
           FLDIACFF G  K++VA +L+     +  D    LI++SL+ +     + MHD+L+ MGR
Sbjct: 544 FLDIACFFIGRKKEYVAKVLEGRYGYNPEDDFGTLIERSLIKVDDSGTIGMHDLLRGMGR 603

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           +IV++ES + P +RSR+W  ++   VLK   GT+ ++G+ LD+ + +  +L   +FT M 
Sbjct: 604 EIVKEESPENPAQRSRIWSQEDAWIVLKMQMGTEVVKGLTLDVRRSEDKSLSTGSFTKMK 663

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            L+L                      L  + V+L    + L K L ++ W   PL  LPS
Sbjct: 664 LLKL----------------------LQINGVELTGSFERLSKVLTWICWLECPLEFLPS 701

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           +F    LV +++R S + + W+ +K            L+ L                   
Sbjct: 702 DFTLDYLVVIDMRYSNIRELWKEKKI-----------LNKLKI----------------- 733

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
              ++ SY  NL++ P +                         +LE L L GC  L  I 
Sbjct: 734 ---LDLSYSKNLVKTPNMHS----------------------LNLEKLLLEGCSSLVEIH 768

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
                 +SLV+L + GC  L+  PE +  +E    + +D     +  SS E+L  +  L 
Sbjct: 769 QCIGHSKSLVSLNISGCSQLQKLPECMGDIECFTELLADGINNEQFLSSVEHLRCVRKLS 828

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
           +             G  ++ + +    S     P+S  +   L +  S+  +        
Sbjct: 829 LR------------GHWDWNWNLPYWPS-----PNSSWIPAFLLTPTSTIWR-------- 863

Query: 653 FLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE 712
            LLG   +G   +S+ A   +  +   LSSLE L LSGNNF SLP+ I  +S+LR + ++
Sbjct: 864 -LLGKLKLGY-GLSERATNSV--DFGGLSSLEELDLSGNNFFSLPSGIGILSKLRLLTVQ 919

Query: 713 DFNMLQSLPELPLCLKYLHLIDCKMLQ 739
           +   L S+PELP  L++L    C+ +Q
Sbjct: 920 ECRNLVSIPELPSNLEHLDAFGCQSMQ 946


>gi|15234300|ref|NP_195337.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
 gi|2961373|emb|CAA18120.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7270566|emb|CAB81523.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332661224|gb|AEE86624.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
          Length = 1607

 Score =  276 bits (706), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 213/700 (30%), Positives = 330/700 (47%), Gaps = 106/700 (15%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            V+ +GIWGM GIGKTTLAKA FDQ S  +E SCF+      + +  GL  L ++     L
Sbjct: 602  VRRIGIWGMPGIGKTTLAKAFFDQISGGYEASCFIKHF-DKAFSGKGLHRLLEEHFGKIL 660

Query: 67   SEKLEV-AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
             E   V +    P   ++++ + + L+VLDDV+     +  +     FG GS I++T+RD
Sbjct: 661  KELPRVCSSITRPSLPRDKLSKKRTLVVLDDVHNPLVAESFLEGFHWFGPGSLIIITSRD 720

Query: 126  KRVLEKFR-GEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
            K+V   FR  +   +Y V      EA + F   AF+ +   ++L   S  V+ Y  GNPL
Sbjct: 721  KQV---FRLCQINHVYEVQSFNENEALQLFSQCAFRRDINEQNLLELSLKVIDYASGNPL 777

Query: 185  VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
             L      L  K  S        L    +   + I+D+ K S+  L    K+IFLDIACF
Sbjct: 778  ALSFYCRVLKGKELSEMETTFFKLK---QRTPYKIFDLFKSSYETLDDNEKNIFLDIACF 834

Query: 245  FEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
            F GE+ D+V  +L+         +D+L++  LV+IS N + MH I+Q+ GR+I+  E+  
Sbjct: 835  FSGENVDYVMRLLEGCGFFPHVGIDVLVENCLVTISENRVKMHRIIQDFGREIIDGET-V 893

Query: 302  EPGKRSRLWDPKEISRVLKHNK---------------GTDAIEGIFLDLSKIKGINLDPR 346
            +  +R RL DP  I  +L+ ++               GT+ IEGI LD S +   ++ P 
Sbjct: 894  QIERRRRLSDPWSIKFLLEDDELEANEDPKATYTRTLGTEDIEGILLDTSNLT-FDVKPG 952

Query: 347  AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
            AF NM +LR  K Y   +               ++  ++LP GL +LP +LR LHW+ YP
Sbjct: 953  AFENMLSLRFLKIYCSSYE--------------NHYSLRLPKGLKFLPDELRLLHWENYP 998

Query: 407  LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA---------------CVPSSIQNFKYLS 451
            L++LP +F P +LVELNL  S++++ W G K+                    I   + + 
Sbjct: 999  LQSLPQDFDPCHLVELNLSYSQLQKLWAGTKSLEMLKVVKLCHSQQLTAIDDILKAQNIE 1058

Query: 452  ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSI 511
             +  +GC+ L+ FP+         +N S C  +  FP++S  +  L+L  + I E+P SI
Sbjct: 1059 LIDLQGCRKLQRFPATGQLQHLRVVNLSGCREIKSFPEVSPNIEELHLQGTGIRELPISI 1118

Query: 512  ECL-----TDLEVLDL-------------RGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
              L      + E+ +L                  L ++ TS   L  LV L +  C++L 
Sbjct: 1119 VSLFEQAKLNRELFNLLPEFSGVSNAWNNEQSTSLAKLVTSTQNLGKLVCLNMKDCVHLR 1178

Query: 554  HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
              P +++                     FE+   L+VL +  CS LD++     +L+ LY
Sbjct: 1179 KLPYMVD---------------------FES---LKVLNLSGCSDLDDIEGFPPNLKELY 1214

Query: 614  YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF 653
             +  A   + QLP S      L  L++  C  L S P  F
Sbjct: 1215 LVSTALKELPQLPQS------LEVLNAHGCVSLLSIPSNF 1248



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 10/135 (7%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG-------NSETAGGLEH 56
           S+ V+++GI G+ G GKTT+AK ++ Q   +FE S  + D++G       N +       
Sbjct: 286 SNKVRLIGICGLPGSGKTTIAKRLYQQLLPQFELSTIIIDIKGCYPRTCYNEDDRKLQLQ 345

Query: 57  LQKQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
                         E+      H   E ++  K+++VLDDV+ +GQL  L  E   FG G
Sbjct: 346 SHLLSQLLNHKFTGEILQLEAAH---EMLKDKKVVLVLDDVDSIGQLDALANEARWFGPG 402

Query: 117 SRIVVTTRDKRVLEK 131
           SRI++TT+D+R+LE+
Sbjct: 403 SRIIITTQDQRLLEE 417



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 161/393 (40%), Gaps = 70/393 (17%)

Query: 563  EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAI 622
            + L+ ++ +  P+  LP  F+  P   V      S+L  L     SLE L  +    S  
Sbjct: 987  DELRLLHWENYPLQSLPQDFD--PCHLVELNLSYSQLQKLWAGTKSLEMLKVVKLCHSQQ 1044

Query: 623  SQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSS 682
                  +  +  +  +D   C+ L+ FP T    L  + ++++S    REI        +
Sbjct: 1045 LTAIDDILKAQNIELIDLQGCRKLQRFPATG--QLQHLRVVNLS--GCREIKSFPEVSPN 1100

Query: 683  LEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNML---------------QSLPELPLC- 726
            +E L+L G     LP  I  + +   ++ E FN+L                SL +L    
Sbjct: 1101 IEELHLQGTGIRELPISIVSLFEQAKLNRELFNLLPEFSGVSNAWNNEQSTSLAKLVTST 1160

Query: 727  -----LKYLHLIDCKMLQSLP-VLPF-CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM 779
                 L  L++ DC  L+ LP ++ F  L+ L+L+GC+ L  +   P  L+ L L     
Sbjct: 1161 QNLGKLVCLNMKDCVHLRKLPYMVDFESLKVLNLSGCSDLDDIEGFPPNLKELYLVS-TA 1219

Query: 780  LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSA 839
            L+ LP+LP  L++L    C  L S+P           S  E+L ++              
Sbjct: 1220 LKELPQLPQSLEVLNAHGCVSLLSIP-----------SNFERLPRY-------------- 1254

Query: 840  AICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPG 899
               + F+NC  L+    N+ + ++L  + H+A     L   +A+N            +P 
Sbjct: 1255 ---YTFSNCFALSASVVNEFVKNALTNVAHIAREKQELNKSLALN----------FTVPS 1301

Query: 900  SEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFA 932
             E  +   +   GSS+ IQL   SS R + GFA
Sbjct: 1302 PESKNITFDLQPGSSVIIQL--GSSWRLIRGFA 1332



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 427  SKVEQPWEGEK----ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
            S V   W  E+    A + +S QN   L  L+ K C  LR  P  + F     +N S C 
Sbjct: 1139 SGVSNAWNNEQSTSLAKLVTSTQNLGKLVCLNMKDCVHLRKLPYMVDFESLKVLNLSGCS 1198

Query: 483  NLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
            +L +       +  LYL  +A++E+P   +    LEVL+  GC  L  I ++F +L
Sbjct: 1199 DLDDIEGFPPNLKELYLVSTALKELP---QLPQSLEVLNAHGCVSLLSIPSNFERL 1251


>gi|297833730|ref|XP_002884747.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330587|gb|EFH61006.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 975

 Score =  276 bits (706), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 192/570 (33%), Positives = 298/570 (52%), Gaps = 49/570 (8%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV---------RG-NSETAGG 53
           S+ V++VG+WG  GIGKTT+A+A+F + S  F+ S F+            RG N +    
Sbjct: 202 SEQVRMVGLWGPSGIGKTTIARALFIRISRHFQSSVFIDRAFVSKTMEIFRGANPDDYNM 261

Query: 54  LEHLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
             HLQ+  LS  L++K       + H     ER++  K+LIVLDD+++   L  L+G   
Sbjct: 262 KLHLQENFLSEILNKK----DIKVHHLGAVGERLKHKKVLIVLDDLDDQIVLDALVGGTQ 317

Query: 112 QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH 171
            FG GSRI+V T+DK +L     +  +IY+V     + A E FC +AF++N   E     
Sbjct: 318 WFGCGSRILVITKDKHLLRAHGID--RIYKVGPPSHKLALEMFCQYAFRQNSPREGFAEL 375

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT 231
           +  V       PL L V G  L  +    W   L  L R+ +     I   L++S++ L 
Sbjct: 376 ASEVTKGAGNLPLALNVFGLYLRGRDIEDW---LDMLPRLRKGPYGKIEKALRVSYDGLG 432

Query: 232 PRV-KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDIL 287
            +  K+IF  IAC F G + + +  +L DS+ +V   L  LID SL+   G+ +++H ++
Sbjct: 433 SKEDKAIFCHIACLFNGMEANDIKLLLADSDLEVNIGLKNLIDNSLIHERGSTVHIHCLV 492

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA 347
           QEMG++I+R +S K P +R  L D K+I  V     G   + G+ L L++   +++D RA
Sbjct: 493 QEMGKEIIRTQSNK-PREREFLVDSKDIGDVFNDTSGAKKVLGLSLSLAEFDKLHIDKRA 551

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F  M NLR  + Y           S+    Q+   ++ LP GL Y P KL+ L WD YP+
Sbjct: 552 FKRMRNLRFLRIYED---------SLDLHNQV---RLHLPGGLSYFPPKLKLLCWDGYPM 599

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEG--------EKACVPSSIQNFKYLSALSFKGCQ 459
           R+LP++F+ ++L  L +R SK+E+ WEG        ++  +PSS++N   L+ L  + C 
Sbjct: 600 RSLPASFRAEHLNVLRMRNSKLEKLWEGVESSAYPEDRVELPSSLRN---LNELYMQTCS 656

Query: 460 SLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEV 519
            L +  + ++      ++   C     FP IS  V+ L L Q+AI+EVP  IE  + L  
Sbjct: 657 ELVALSAGINLESLYRLDLGGCSRFWGFPYISKNVSFLILNQTAIKEVPWWIENFSRLIC 716

Query: 520 LDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
           L++R CKRL+ IS    KL+ L  +    C
Sbjct: 717 LEMRECKRLRYISPKISKLKLLEKVDFSNC 746



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 108/252 (42%), Gaps = 63/252 (25%)

Query: 722 ELPLCLKYL---HLIDCKMLQSLPVLPFCLESL---DLTGCNMLRSLPELPLCLQYLNLE 775
           ELP  L+ L   ++  C  L +L      LESL   DL GC+     P +   + +L L 
Sbjct: 639 ELPSSLRNLNELYMQTCSELVALSA-GINLESLYRLDLGGCSRFWGFPYISKNVSFLILN 697

Query: 776 DCNMLRSLPELPLCLQ------LLTVRNCNRLQSL-PEI--LLCLQELDASVLEKLSKHS 826
                 ++ E+P  ++       L +R C RL+ + P+I  L  L+++D S  E L+  S
Sbjct: 698 QT----AIKEVPWWIENFSRLICLEMRECKRLRYISPKISKLKLLEKVDFSNCEALTSAS 753

Query: 827 PDLQW--APESLKSAAI-------CFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRL 877
               W   P ++ +             F NC KL+ +A   ++  S+ +           
Sbjct: 754 ----WLDGPSAVATGGNNIYTKLPVLNFINCFKLDQEA---LVQQSVFK----------- 795

Query: 878 GYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
                            ++LPG E+P +F+N+++GS++ I L   S  +   GF  C  +
Sbjct: 796 ----------------YLILPGREVPLYFTNRATGSTLAICLLQRSLSQQFFGFRVCIAV 839

Query: 938 DSKKVDSDCFRY 949
           D+ + +S   R+
Sbjct: 840 DTHEANSFTPRW 851


>gi|297836995|ref|XP_002886379.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332220|gb|EFH62638.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1092

 Score =  276 bits (705), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 226/766 (29%), Positives = 360/766 (46%), Gaps = 151/766 (19%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           +D V++V I G  GIGKTT+A+A+    S++F+ +CFV ++RG+      +  LQ+Q LS
Sbjct: 208 NDEVKMVAITGPAGIGKTTIARALQTLLSNKFQLTCFVDNLRGSYYNGLDVVRLQEQFLS 267

Query: 64  TTLSEKLEVAGPNIPH--FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             L++     G  I H    +ER+ + ++LI+LDDVN + QL  L  E   FG GSRIVV
Sbjct: 268 NLLNQD----GLRIRHSGVIEERLCKQRVLIILDDVNNIKQLMALANETTWFGPGSRIVV 323

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TT +K +L++   +   +Y V     E+A +  C +AF++N         ++ V+     
Sbjct: 324 TTENKELLQQHGID--NMYHVGFPSDEDAIKILCKYAFRKNSLYHGFKKLAKRVIELCCN 381

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIH-DIYDILKISFNKLTPRVKSIFLD 240
            PL L V+GSSL  K +  W +V+H L    E+ ++ DI ++L+I +  L    +S+FL 
Sbjct: 382 LPLGLCVVGSSLRGKNEEEWEQVIHKL----ETNLNQDIEEVLRIGYESLDENEQSLFLH 437

Query: 241 IACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS--GNFLNMHDILQEMGRQIV 295
           IA FF  +D D + ++  +S+ DV   L IL+++SLV IS     + MH +LQ++G++ +
Sbjct: 438 IAVFFNHKDGDHMKTMFAESDLDVKHGLKILVNRSLVEISTYDGRIMMHRLLQQVGKKAI 497

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
            ++   EP KR  L D  +I  VL+   GT A+ GI  D+S I  +++  +AF  M NLR
Sbjct: 498 HKQ---EPWKRKILLDAPDICDVLERATGTRAMSGISFDISGINEVSISKKAFQRMPNLR 554

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
             + Y  +                   +V +P G+++ P +LR L W+ YP ++L   F 
Sbjct: 555 FLRVYKSRVD--------------GNDRVHIPEGMEF-PHRLRLLDWEEYPRKSLHPTFH 599

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
           P+ LVELN   SK+E+ WEG +      + N K                           
Sbjct: 600 PEYLVELNFENSKLEKLWEGREV-----LTNLK--------------------------K 628

Query: 476 INFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF 535
           IN +   NL + P ++                       T+LE L L  C+ L+ I +SF
Sbjct: 629 INLALSRNLKKLPDLT---------------------YATNLEELSLLRCESLEAIPSSF 667

Query: 536 CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
             L  L  L++  C+++E  P  +                        NL  LE + +  
Sbjct: 668 SHLHKLHRLLMNSCISIEVIPAHM------------------------NLASLEQVSMAG 703

Query: 596 CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
           CS L N+P    ++  LY    + + +  LP+S+ L + L  L  +  +  +        
Sbjct: 704 CSSLRNIPLMSTNITNLYI---SDTEVEYLPASIGLCSRLEFLHITRNRNFK-------- 752

Query: 656 GLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN 715
                GL H+               +SL  L L G + E +P  IK + +L  + L +  
Sbjct: 753 -----GLSHLP--------------TSLRTLNLRGTDIERIPDCIKDLHRLETLDLSECR 793

Query: 716 MLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCL-----ESLDLTGC 756
            L SLPELP  L  L   DC+ L+++    FC        +D T C
Sbjct: 794 KLASLPELPGSLSSLMARDCESLETV----FCPMNTPNTRIDFTNC 835



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 169/399 (42%), Gaps = 80/399 (20%)

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
           H PE +E    L+ +  +  P   L  +F     +E+ F  + SKL+ L +    L  L 
Sbjct: 570 HIPEGMEFPHRLRLLDWEEYPRKSLHPTFHPEYLVELNF--ENSKLEKLWEGREVLTNLK 627

Query: 614 YI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
            I LA +  + +LP     +N L  L    C+ LE+ P +F        LL  S  ++  
Sbjct: 628 KINLALSRNLKKLPDLTYATN-LEELSLLRCESLEAIPSSFSHLHKLHRLLMNSCISIEV 686

Query: 673 IPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLP-ELPLC--LK 728
           IP  +  L+SLE + ++G ++  ++P +   ++ L     E    ++ LP  + LC  L+
Sbjct: 687 IPAHMN-LASLEQVSMAGCSSLRNIPLMSTNITNLYISDTE----VEYLPASIGLCSRLE 741

Query: 729 YLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC------LQYLNLEDCNMLRS 782
           +LH+   +  + L  LP  L +L+L G ++ R    +P C      L+ L+L +C  L S
Sbjct: 742 FLHITRNRNFKGLSHLPTSLRTLNLRGTDIER----IPDCIKDLHRLETLDLSECRKLAS 797

Query: 783 LPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAIC 842
           LPELP  L  L  R+C  L    E + C              ++P+ +            
Sbjct: 798 LPELPGSLSSLMARDCESL----ETVFC------------PMNTPNTR------------ 829

Query: 843 FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEI 902
            +FTNC KL  +A    +  S   +  +                          LPG E+
Sbjct: 830 IDFTNCFKLCQEALRASIQQSFFLVDAL--------------------------LPGREM 863

Query: 903 PDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKK 941
           P  F +++ G+S+ I  PP+   R+   F  C +   K+
Sbjct: 864 PAVFDHRAKGNSLTI--PPNVH-RSYSRFVVCVLFSPKQ 899


>gi|15238104|ref|NP_198969.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10178008|dbj|BAB11460.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007307|gb|AED94690.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1038

 Score =  275 bits (704), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 211/654 (32%), Positives = 340/654 (51%), Gaps = 87/654 (13%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-----L 57
           +SD V+++GIWG  GIGKTT+A+A+++Q S  F+  CF+ +++G+ ++ G   +     L
Sbjct: 201 NSDEVKMIGIWGPAGIGKTTIARALYNQLSTNFQFKCFMGNLKGSYKSIGVDNYDWKLNL 260

Query: 58  QKQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           Q Q+LS  L++  +V   ++    K+ +   K+LIV+DDV+++ QL  L  E   FG GS
Sbjct: 261 QNQLLSKILNQN-DVKTDHLGGI-KDWLEDKKVLIVIDDVDDLEQLLALAKEPSWFGSGS 318

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+VTT+DK +++     +   Y V     + A E  C  AF+++  P D        V+
Sbjct: 319 RIIVTTKDKTIMKTLLVNDNNFYHVGYPTNKVALEILCLSAFQKSF-PRDGFEELARKVA 377

Query: 178 YTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           Y  GN PL L V+GSSL  + K  W K+  D  R+  S    I D+LK ++ KL+ + + 
Sbjct: 378 YLCGNLPLCLSVVGSSLRGQSKHRW-KLQSD--RLETSLDRKIEDVLKSAYEKLSKKEQV 434

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGR 292
           +FL IACFF       V ++L DS  DV   L  L DK LV IS  + + MH +LQ++GR
Sbjct: 435 LFLHIACFFNNTYISVVKTLLADSNLDVRNGLKTLADKCLVHISRVDRIFMHPLLQQLGR 494

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
            IV ++S+ EP KR  L + +EI  VL +  GT ++ GI  D+SK+   ++  RAF  M 
Sbjct: 495 YIVLEQSD-EPEKRQFLVEAEEIRDVLANETGTGSVLGISFDMSKVSEFSISGRAFEAMR 553

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NLR  + Y             S+ ++++   +++   + YLP +LR LHW+ YP ++LP 
Sbjct: 554 NLRFLRIY-----------RRSSSKKVT---LRIVEDMKYLP-RLRLLHWEHYPRKSLPR 598

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKAC--------------------------------- 439
            F+P+ LV L++  S +E+ W G ++                                  
Sbjct: 599 RFQPERLVVLHMPHSNLEKLWGGIQSLTNLKNIDLSFSRKLKEIPNLSNATNLETLTLIK 658

Query: 440 ------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
                 +PSSI N + L AL   GC+ L+  P+N++ V    ++ + C  L  FP IS  
Sbjct: 659 CSSLVELPSSISNLQKLKALMMFGCKMLKVVPTNINLVSLEKVSMTLCSQLSSFPDISRN 718

Query: 494 VTRLYLGQSAIEEVPSS-IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
           +  L +G++ IEEVP S ++  + L+ L L  C+ LKR++     +   +T++ L   ++
Sbjct: 719 IKSLDVGKTKIEEVPPSVVKYWSRLDQLSLE-CRSLKRLTY----VPPSITMLSLSFSDI 773

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG----LEVLFVEDCSKLDNL 602
           E  P+ + ++  L      RT   +      +LPG    LE L    C  L+ +
Sbjct: 774 ETIPDCVIRLTRL------RTLTIKCCRKLVSLPGLPPSLEFLCANHCRSLERV 821



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 123/311 (39%), Gaps = 77/311 (24%)

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
           ++  L++  S +E++   I+ LT+L+ +DL   ++LK I  +     +L TL L+ C   
Sbjct: 604 RLVVLHMPHSNLEKLWGGIQSLTNLKNIDLSFSRKLKEIP-NLSNATNLETLTLIKC--- 659

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG--SLE 610
                               + + ELPSS  NL  L+ L +  C  L  +P NI   SLE
Sbjct: 660 --------------------SSLVELPSSISNLQKLKALMMFGCKMLKVVPTNINLVSLE 699

Query: 611 YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV 670
            +   L      SQL S   +S  ++SLD    K +E  P                    
Sbjct: 700 KVSMTLC-----SQLSSFPDISRNIKSLDVGKTK-IEEVP-------------------- 733

Query: 671 REIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
              P  + Y S L+ L L   + + L  +   ++ L       F+ ++++P+  + L  L
Sbjct: 734 ---PSVVKYWSRLDQLSLECRSLKRLTYVPPSITMLSL----SFSDIETIPDCVIRLTRL 786

Query: 731 HLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCL 790
                              +L +  C  L SLP LP  L++L    C  L  +      +
Sbjct: 787 R------------------TLTIKCCRKLVSLPGLPPSLEFLCANHCRSLERVHSFHNPV 828

Query: 791 QLLTVRNCNRL 801
           +LL   NC +L
Sbjct: 829 KLLIFHNCLKL 839



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 104/454 (22%), Positives = 172/454 (37%), Gaps = 120/454 (26%)

Query: 491 SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR---SLVTLILL 547
           +G V  +    S + E   S      +   +LR  +  +R S+    LR    +  L  L
Sbjct: 526 TGSVLGISFDMSKVSEFSISGRAFEAMR--NLRFLRIYRRSSSKKVTLRIVEDMKYLPRL 583

Query: 548 GCLNLEHFPEILEKMEHLKRIYSDRTPITELP-----------SSFENLPGLEVLFVEDC 596
             L+ EH+P    +    +R   +R  +  +P            S  NL  +++ F    
Sbjct: 584 RLLHWEHYP----RKSLPRRFQPERLVVLHMPHSNLEKLWGGIQSLTNLKNIDLSFSRKL 639

Query: 597 SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF-LL 655
            ++ NL  N  +LE L   L   S++ +LPSS++    L++L    CK L+  P    L+
Sbjct: 640 KEIPNL-SNATNLETL--TLIKCSSLVELPSSISNLQKLKALMMFGCKMLKVVPTNINLV 696

Query: 656 GLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLP-AIIKQMSQLRFIHLEDF 714
            L  + +   S  +    P     + SL++        E +P +++K  S+L  + LE  
Sbjct: 697 SLEKVSMTLCSQLS--SFPDISRNIKSLDV---GKTKIEEVPPSVVKYWSRLDQLSLE-- 749

Query: 715 NMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC------ 768
                               C+ L+ L  +P  +  L L+       +  +P C      
Sbjct: 750 --------------------CRSLKRLTYVPPSITMLSLS----FSDIETIPDCVIRLTR 785

Query: 769 LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPD 828
           L+ L ++ C  L SLP LP  L+ L   +C  L+ +                  S H+P 
Sbjct: 786 LRTLTIKCCRKLVSLPGLPPSLEFLCANHCRSLERVH-----------------SFHNP- 827

Query: 829 LQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRL-GYEMAINEKL 887
                           F NCLKL+ KA               AI   R+ GY        
Sbjct: 828 -----------VKLLIFHNCLKLDEKARR-------------AIKQQRVEGY-------- 855

Query: 888 SELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
                  I LPG ++P  F+++++G+SI I L P
Sbjct: 856 -------IWLPGKKVPAEFTHKATGNSITIPLAP 882


>gi|240255955|ref|NP_193427.4| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658425|gb|AEE83825.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1147

 Score =  275 bits (704), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 248/824 (30%), Positives = 401/824 (48%), Gaps = 79/824 (9%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQK 59
           ++S +   +VGIWG  GIGK+T+ +A+F Q S +F    F++      S+ +G     +K
Sbjct: 159 LESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWEK 218

Query: 60  QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           ++LS  L +K       I HF   ++R++  K+LI+LDDV+ +  L+ L+G+ + FG GS
Sbjct: 219 ELLSEILGQK----DIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLRTLVGKAEWFGSGS 274

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+V T+D+++L+    E   IY V       A +  C +AF +   P+D    +  V  
Sbjct: 275 RIIVITQDRQLLKAH--EIDLIYEVKLPSQGLALKMICQYAFGKYSPPDDFKELAFEVAK 332

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                PL L VLGSSL  + K  W ++L +L         DI   L++S+ +L P+ + I
Sbjct: 333 LAGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLN---RDIMKTLRVSYVRLDPKDQDI 389

Query: 238 FLDIACFFEGEDKDFVASILDD--SESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQI 294
           F  IA  F G     +   L D  + +  L  L DKSL+ ++ N  + MH++LQ++  +I
Sbjct: 390 FHYIAWLFNGWKVKSIKDFLGDGVNVNIRLKTLDDKSLIRLTPNDTIEMHNLLQKLATEI 449

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGIN-----LDPRAFT 349
            R+ES   PGKR  L + +EI  V   N GT+ + GI    S    I+     +D  +F 
Sbjct: 450 DREESNGNPGKRRFLENAEEILDVFTDNTGTEKLLGIDFSTSSDSQIDKPFISIDENSFQ 509

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
            M NL+    +   ++            Q   ++++LPNGL YLP+KL++L W+  PL+ 
Sbjct: 510 GMLNLQFLNIHDHYWW------------QPRETRLRLPNGLVYLPRKLKWLRWENCPLKR 557

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGE------KACVPSSIQNFKYLSALSFK------- 456
           LPSNFK + LVEL +  S +E+ W G       K     +  N K +  LS         
Sbjct: 558 LPSNFKAEYLVELRMENSALEKLWNGTQPLGSLKKMNLRNSNNLKEIPDLSLATNLEELD 617

Query: 457 --GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIE-EVPSSIEC 513
              C+ L SFPS L+      +N   C  L  FP+I   + + ++    IE EV    +C
Sbjct: 618 LCNCEVLESFPSPLNSESLKFLNLLLCPRLRNFPEI---IMQSFIFTDEIEIEVA---DC 671

Query: 514 L--TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YS 570
           L   +L  LD   C  L+R + S  +   L  L + G   LE   E ++ +  LKR+  S
Sbjct: 672 LWNKNLPGLDYLDC--LRRCNPSKFRPEHLKNLTVRGNNMLEKLWEGVQSLGKLKRVDLS 729

Query: 571 DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSV 629
           +   + E+P        LE+L + +C  L  LP  IG+L+ LY + +   + +  LP  +
Sbjct: 730 ECENMIEIP-DLSKATNLEILDLSNCKSLVMLPSTIGNLQKLYTLNMEECTGLKVLPMDI 788

Query: 630 ALSNMLRSLDSSHCKGLESFPRTFLLGLS-AMGLLHISDYAVREIPQEIAYLSSLEILYL 688
            LS    SL + H KG  S    F+  +S ++ +L++ D A+ E+P    +   +E+   
Sbjct: 789 NLS----SLHTVHLKGCSSL--RFIPQISKSIAVLNLDDTAIEEVPCFENFSRLMELSMR 842

Query: 689 SGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP---ELPLCLKYLHLIDCKMLQSLPVLP 745
              +    P I   + +L   +L D   ++ +P   E    LK L++  CKML+++    
Sbjct: 843 GCKSLRRFPQISTSIQEL---NLAD-TAIEQVPCFIEKFSRLKVLNMSGCKMLKNISPNI 898

Query: 746 FCLESL---DLTGC-NMLRSLPELPLCLQYLNLEDCNMLRSLPE 785
           F L  L   D T C  ++ +L +    ++  N E  N +   P+
Sbjct: 899 FRLTRLMKVDFTDCGGVITALSDPVTTMEDQNNEKINKVEKRPK 942


>gi|39104607|dbj|BAC43641.2| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1017

 Score =  275 bits (704), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 225/756 (29%), Positives = 349/756 (46%), Gaps = 155/756 (20%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETA----GGLEHLQKQML 62
           V+IV I G  GIGKTT+A+A++   S  F+ SCFV ++RG+  +     G   HLQ+Q L
Sbjct: 208 VKIVAIAGPAGIGKTTIARALYGLLSKRFQLSCFVDNLRGSYHSGFDEYGFKLHLQEQFL 267

Query: 63  STTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           S  L++    +G  I H    KE +   ++LI+LDDVN++ QL+ L      FG GSRIV
Sbjct: 268 SKVLNQ----SGMRICHLGAIKENLSDQRVLIILDDVNKLKQLEALANGTTWFGPGSRIV 323

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           VTT +K +L++        Y V     E+A +  C++AFK+          S SV     
Sbjct: 324 VTTENKELLQQH--GINNTYHVGFPSDEDALKILCSYAFKQTSPRHGFEELSESVTKLCG 381

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
             PL L V+GSSL  K++  W  V+  L  I +    DI D+L++ +  L    +++FL 
Sbjct: 382 KLPLGLCVVGSSLRGKKEDEWEDVVTRLETILD---QDIEDVLRVGYESLDENAQTLFLH 438

Query: 241 IACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI-----SGNFLNMHDILQEMGR 292
           IA FF  ED D V ++  +S+ DV   L IL ++SL+ +         + MH +LQ+MG+
Sbjct: 439 IAIFFNKEDGDLVKTMFAESDLDVKYGLKILENRSLIKMKIFSNGDTKIVMHRLLQQMGK 498

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTD-AIEGIFLDLSKIKGINLDPRAFTNM 351
           + ++++   EP +R  L D +EI  VL+H KGT   + G+  D+S+I  +++  +AF  M
Sbjct: 499 RAIQKQ---EPWERQILIDAREICHVLEHAKGTGWNVHGMSFDISRISEVSIRKKAFKRM 555

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NL+  K Y  K                  +++ +P  +D+ P  LR L W  YP ++LP
Sbjct: 556 PNLQFLKVYKSK--------------DDGNNRMHVPEEMDF-PCLLRLLDWKAYPSKSLP 600

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
             F P++LVELN+  S++E  W+G +      ++N K                       
Sbjct: 601 PTFNPEHLVELNMHSSQLEYLWQGTQP-----LKNLK----------------------- 632

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
               ++ S   NL + P +S                       T+LE L L GC+ L  I
Sbjct: 633 ---KMDLSQSKNLKQLPDLSNA---------------------TNLEYLYLMGCESLIEI 668

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
            +S   L  L  L  +GC+NLE  P       H+                  NL  L+ +
Sbjct: 669 PSSISHLHKLEMLATVGCINLEVIPA------HM------------------NLESLQTV 704

Query: 592 FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
           ++  CS+L N+P    ++ YL+    A   +   P        L++LD S  +  +    
Sbjct: 705 YLGGCSRLRNIPVMSTNIRYLFITNTAVEGVPLCPG-------LKTLDVSGSRNFKGL-- 755

Query: 652 TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
                     L H+               +SL  L L   + E +P   K + QL+ ++L
Sbjct: 756 ----------LTHLP--------------TSLTTLNLCYTDIERIPDCFKSLHQLKGVNL 791

Query: 712 EDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC 747
                L SLPELP  L  L   DC+ L+++    FC
Sbjct: 792 RGCRRLASLPELPRSLLTLVADDCESLETV----FC 823



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 141/342 (41%), Gaps = 100/342 (29%)

Query: 635 LRSLDSSHCKGLESFP----RTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
           L+ +D S  K L+  P     T L  L  MG       ++ EIP  I++L  LE+L   G
Sbjct: 631 LKKMDLSQSKNLKQLPDLSNATNLEYLYLMGC-----ESLIEIPSSISHLHKLEMLATVG 685

Query: 691 N-NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLE 749
             N E +PA +  +  L+ ++L   + L+++P +   ++YL + +   ++ +P+ P  L+
Sbjct: 686 CINLEVIPAHM-NLESLQTVYLGGCSRLRNIPVMSTNIRYLFITNT-AVEGVPLCP-GLK 742

Query: 750 SLDLTGCNMLR--------SLPELPLC----------------LQYLNLEDCNMLRSLPE 785
           +LD++G    +        SL  L LC                L+ +NL  C  L SLPE
Sbjct: 743 TLDVSGSRNFKGLLTHLPTSLTTLNLCYTDIERIPDCFKSLHQLKGVNLRGCRRLASLPE 802

Query: 786 LPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEF 845
           LP  L  L   +C   +SL  +   L  L AS                         F F
Sbjct: 803 LPRSLLTLVADDC---ESLETVFCPLNTLKAS-------------------------FSF 834

Query: 846 TNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDW 905
            NC KL+ +A   I+  S      M  A                      VLPG E+P  
Sbjct: 835 ANCFKLDREARRAIIQQSFF----MGKA----------------------VLPGREVPAV 868

Query: 906 FSNQSSGSSICIQLP--PHSSCRNLIGFAFCAVLDSKKVDSD 945
           F +++ G S+ I+    P++S      F FC V+ S+   SD
Sbjct: 869 FDHRAKGYSLTIRPDGNPYTS------FVFCVVV-SRNQKSD 903


>gi|227438141|gb|ACP30560.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 823

 Score =  275 bits (704), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 217/673 (32%), Positives = 331/673 (49%), Gaps = 104/673 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLE----HLQK 59
           S  V++VGIWG  GIGKTT+A+A+++QF   F+ S F+ +V   SE+ GG       L+ 
Sbjct: 9   SQEVRLVGIWGPAGIGKTTIARALYNQFHENFKLSIFMENV---SESYGGTNLDSYGLKL 65

Query: 60  QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            +    LS+ L+  G  I H    KER++  K+L VLDDV+ + QL+ L  E   FG  S
Sbjct: 66  GLQQRFLSKLLDQHGLRIHHLGAIKERLKNQKVLAVLDDVDNIEQLQALAKETQWFGNKS 125

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+VTTR+K++L         +Y+V     EEA   FC  AF+E +  +D    +    +
Sbjct: 126 RIIVTTRNKQLL--ISHNISHVYKVPFPSREEALAIFCQHAFRECYPSDDFKDIAIEFAT 183

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                PL L VLGS +  K K  W   L  L      EI  +   LK+ +  L    K++
Sbjct: 184 LAGHLPLGLRVLGSFMRGKSKEEWEVSLPTLKTRLTGEIEKL---LKVGYEGLHKDDKAL 240

Query: 238 FLDIACFFEGEDKDFVAS-ILDDSESDV---LDILIDKSLVSI--SGNFLNMHDILQEMG 291
           FL IAC F G  + +V   ++ +S+ DV   L +L D+SL+ I   G  + MH +L+++G
Sbjct: 241 FLHIACLFNGHHETYVKQMVVANSDLDVSFGLKVLADRSLIQIYVDGKVV-MHSLLRQLG 299

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTN 350
           R++VR++S  EPGKR  L   +EI  VL +N GTD++ G+ +D+  + +   ++ +AF N
Sbjct: 300 REVVREQSVDEPGKRQFLMSAREICGVLSNNTGTDSVLGMSVDMCDLNEDFYINEKAFEN 359

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLP-NGLDYLPKKLRYLHWDTYPLRT 409
           M NL   + Y                   + +K++LP +GL YLP +LR L WD YP   
Sbjct: 360 MRNLLYIRIY--------------RSNDANPNKMKLPDDGLSYLP-QLRLLQWDAYPHMF 404

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEKA------------------------------- 438
           LPS F+ + LVEL++  SK++  W G+ A                               
Sbjct: 405 LPSRFRTECLVELSMSHSKLKTLW-GDNAQPLRNLKNMNLSNSPNLESFPNLLEATKLER 463

Query: 439 -----C-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP 488
                C     +PSSIQN   LS L    C SL   P+N++      ++F  C+ L  FP
Sbjct: 464 LDLSWCESLVELPSSIQNLHKLSLLEMSCCTSLEILPTNINLASLSRLHFRNCLRLKTFP 523

Query: 489 QISGKVTRLYLGQSAIEEVPSSIE--------CLTDLEV------------LDLRGCKRL 528
           +IS  +  L +  +AI EVP S++        C+   EV            L LRG  +L
Sbjct: 524 EISTNLNYLKIKGTAITEVPPSVKSWRRIEEICMESTEVRILMNLPYILDTLCLRGNTKL 583

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
             I+    +LR L  + +  C++L + P++   + +L     +   +  L   F N P +
Sbjct: 584 VAIANYLIRLRRLRMIDISFCVSLVYLPKLPYSVRYLTAFNCE--SLQRLHGPFRN-PSI 640

Query: 589 EVLFVEDCSKLDN 601
            + F  +C KLD+
Sbjct: 641 RLKFT-NCLKLDH 652



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 141/350 (40%), Gaps = 87/350 (24%)

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSG-NN 692
           L++++ S+   LESFP   LL  + +  L +S   ++ E+P  I  L  L +L +S   +
Sbjct: 438 LKNMNLSNSPNLESFPN--LLEATKLERLDLSWCESLVELPSSIQNLHKLSLLEMSCCTS 495

Query: 693 FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPV--------- 743
            E LP  I  ++ L  +H  +   L++ PE+   L YL +    + +  P          
Sbjct: 496 LEILPTNI-NLASLSRLHFRNCLRLKTFPEISTNLNYLKIKGTAITEVPPSVKSWRRIEE 554

Query: 744 -------------LPFCLESLDLTGCNMLRSLPELPLCLQYLNLED---CNMLRSLPELP 787
                        LP+ L++L L G   L ++    + L+ L + D   C  L  LP+LP
Sbjct: 555 ICMESTEVRILMNLPYILDTLCLRGNTKLVAIANYLIRLRRLRMIDISFCVSLVYLPKLP 614

Query: 788 LCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTN 847
             ++ LT  NC  LQ L                    H P         ++ +I  +FTN
Sbjct: 615 YSVRYLTAFNCESLQRL--------------------HGP--------FRNPSIRLKFTN 646

Query: 848 CLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFS 907
           CLKL+  A   I         H ++  +                   ++LPG ++P +F+
Sbjct: 647 CLKLDHNAQEMI---------HQSVFDV-------------------VILPGGQVPAYFT 678

Query: 908 NQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFD 957
           ++ +G+S         S  +   F  C VL +      C   FY SF+ D
Sbjct: 679 HRYNGNSGFYHFTFDGSV-SFYSFKVCLVLAAGTRFESCHTSFYTSFRGD 727


>gi|297794871|ref|XP_002865320.1| hypothetical protein ARALYDRAFT_330904 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311155|gb|EFH41579.1| hypothetical protein ARALYDRAFT_330904 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1156

 Score =  275 bits (703), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 208/671 (30%), Positives = 325/671 (48%), Gaps = 91/671 (13%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            +IVGI GM GIGKTTLA+ ++ ++ H F+ S F+ +V   S+       LQK++L   L
Sbjct: 291 TKIVGIVGMPGIGKTTLAETLYRKWKHRFKRSKFIPNVSKESQRG-----LQKRLLVELL 345

Query: 67  SEKLEVAG--PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            +     G   N   F K+ + + K+ +V+DDV+   Q+K L G+ D   +GS+IV+T+ 
Sbjct: 346 MDIHYKTGYSENEHEFCKDALLQKKVFVVIDDVSSKEQIKTLFGQWDWIKKGSKIVITSS 405

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           D+ +L++   +   + R+N      +   F N AF  +H   +    SR  ++Y KGNPL
Sbjct: 406 DESLLKELVDDTYVVPRLNS---TGSLLWFTNHAFGLDHAEGNFVKLSRHFLNYAKGNPL 462

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
           VL   G  L  K K++W + +  L  I    I D+   L+  +++LT R K IFLDIACF
Sbjct: 463 VLRAFGVELRGKDKAYWEQRIKTLKLISNKMIQDV---LRRRYDELTERQKDIFLDIACF 519

Query: 245 FEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPG 304
           FE E+  +V  +++ S  D +  L DK LV+IS     MHDIL    +++  Q   +   
Sbjct: 520 FESENASYVRCLVNSSIPDEIRDLQDKFLVNISCGRFEMHDILCTFAKELASQALTEVTR 579

Query: 305 KRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSNLRLFKFY--- 360
              RLW  ++I  +L +    + + GIFLD+S++ + +  D + F  M N+R  K Y   
Sbjct: 580 VHLRLWKYQDIIWLLNNKLEMENVRGIFLDMSEVPEEMIFDAKIF-RMCNIRYLKIYNSV 638

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
            PK  E E +          + + QLP        K+ YLHW  YPL  LPS+F P+NLV
Sbjct: 639 YPK--EGEGIFKFD-----RFREFQLP------LNKVSYLHWIKYPLDKLPSDFNPENLV 685

Query: 421 ELNLRCSKVEQPWEGEK----------------------------------AC-----VP 441
            L L  S ++Q WEG K                                   C     +P
Sbjct: 686 NLELPYSSIKQVWEGVKETPKLKWANLSYSSKLTNLLGLSNAKNLERLNLEGCTSLLKLP 745

Query: 442 SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ 501
             ++N + L  L+ +GC+SL +F   ++      +  S C  L EF  IS  +  LYL  
Sbjct: 746 KEMENMESLVFLNMRGCKSL-TFLHRMNLSSLTILILSDCSKLEEFEVISENLEALYLDG 804

Query: 502 SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
           +AI+ +P ++  L  L +L+++GC  L+ +     K ++L  LIL  C  LE  P+ ++ 
Sbjct: 805 TAIKGLPPTVRDLKRLAILNMKGCTELESLPECLGKQKALEELILSNCSKLESVPKAVKN 864

Query: 562 MEHLKRIYSDRTPITELPS--------------------SFENLPGLEVLFVEDCSKLDN 601
           M+ L+ +  D T I ++P                     S      L+ + +++C  L  
Sbjct: 865 MKKLRILLLDGTRIKDIPKINSLERLSLSRNIAMIHLQDSLSGFSNLKCVVMKNCENLRY 924

Query: 602 LPDNIGSLEYL 612
           LP    SLEYL
Sbjct: 925 LPSLPRSLEYL 935



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 132/547 (24%), Positives = 215/547 (39%), Gaps = 95/547 (17%)

Query: 548  GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF--ENLPGLEVLF------------- 592
            G    + F E    +  +  ++  + P+ +LPS F  ENL  LE+ +             
Sbjct: 645  GIFKFDRFREFQLPLNKVSYLHWIKYPLDKLPSDFNPENLVNLELPYSSIKQVWEGVKET 704

Query: 593  -------VEDCSKLDNLP--DNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
                   +   SKL NL    N  +LE L   L   +++ +LP  +     L  L+   C
Sbjct: 705  PKLKWANLSYSSKLTNLLGLSNAKNLERLN--LEGCTSLLKLPKEMENMESLVFLNMRGC 762

Query: 644  KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
            K L    R   + LS++ +L +SD +  E  + I+   +LE LYL G   + LP  ++ +
Sbjct: 763  KSLTFLHR---MNLSSLTILILSDCSKLEEFEVIS--ENLEALYLDGTAIKGLPPTVRDL 817

Query: 704  SQLRFIHLEDFNMLQSLPEL---PLCLKYLHLIDCKMLQSLP--------VLPFCLESLD 752
             +L  ++++    L+SLPE       L+ L L +C  L+S+P        +    L+   
Sbjct: 818  KRLAILNMKGCTELESLPECLGKQKALEELILSNCSKLESVPKAVKNMKKLRILLLDGTR 877

Query: 753  LTGCNMLRSLPELPLC-----------------LQYLNLEDCNMLRSLPELPLCLQLLTV 795
            +     + SL  L L                  L+ + +++C  LR LP LP  L+ L V
Sbjct: 878  IKDIPKINSLERLSLSRNIAMIHLQDSLSGFSNLKCVVMKNCENLRYLPSLPRSLEYLNV 937

Query: 796  RNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKA 855
              C RL+++   L+     +   LEK+                    F FTNC  L   A
Sbjct: 938  YGCERLETVENPLVFRGFFNVIQLEKIRS-----------------TFLFTNCNNLFQDA 980

Query: 856  NNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLI--VLPGSEIPDWFSNQSSGS 913
               I + +  +   +A+   +LG           + G+      PG  +P WF  Q+ GS
Sbjct: 981  KESISSYAKWKCHRLALDCYQLGI----------VSGAFFNTCYPGFIVPSWFHYQAVGS 1030

Query: 914  SICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGY 973
                +L  H     L G A CAV+   +        F V      E +  S  +  D   
Sbjct: 1031 VFEPRLKSHWCNNMLYGIALCAVVSFHENQDPIIDSFSVKCTLQFENEDGSRIR-FDCDI 1089

Query: 974  NSRYIEDLIDSDRVILGFKPCLNV----GFPDGYHHTIATFKFF-AERKFYKIKRCGLCP 1028
             S      I +D V +G+ PC  +      P  YH T    +F+  +    ++  CG   
Sbjct: 1090 GSLTKPGRIGADHVFIGYVPCSRLKDYYSIPI-YHPTYVKVEFYLPDGCKSEVVDCGFRL 1148

Query: 1029 VYANPSE 1035
            +YA P +
Sbjct: 1149 MYAKPGK 1155


>gi|357468515|ref|XP_003604542.1| Resistance protein [Medicago truncatula]
 gi|355505597|gb|AES86739.1| Resistance protein [Medicago truncatula]
          Length = 1088

 Score =  275 bits (703), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 201/580 (34%), Positives = 292/580 (50%), Gaps = 96/580 (16%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG--GLEHLQKQMLSTTLSEKLEVAGPN- 76
           KTT+A+ +F++   E+EG CF+  V   SE +G  G+  L++++ ST L+E +++  PN 
Sbjct: 297 KTTIAEEVFNRSCSEYEGFCFLEKV---SEESGRHGITFLKEKLFSTLLAEDVKINSPNG 353

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           + ++ +  + RMK+LIVLDDV E GQ++ L G LD F   SRI++               
Sbjct: 354 LSNYIQRMIGRMKVLIVLDDVKEEGQIEMLFGTLDWFRSDSRIILI-------------- 399

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
             IY V  L+  EA E F   AFK++H   +    S+ VV+Y KG PL ++VL   L  K
Sbjct: 400 -DIYEVGVLKPSEALELFHLNAFKQSHLEMEYYELSKRVVAYAKGIPLGVKVLAHLLRGK 458

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
            K  W   L  L ++   ++   YD++++S++ L    +  FLDI    E ++   V   
Sbjct: 459 VKEVWESQLDKLKKLPSKKV---YDVMRLSYDDLDRLEQKYFLDIT---ESDNSVVVG-- 510

Query: 257 LDDSESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                   L+ L DK+L++IS  N ++MHDILQEMGR++VRQES ++P KRSRLWDP +I
Sbjct: 511 --------LERLKDKALITISKYNVVSMHDILQEMGREVVRQESSEDPSKRSRLWDPDDI 562

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
             VLK++KGTDAI  I +DLS  + + L P  F  M+NLR   F + K Y++E       
Sbjct: 563 CYVLKNDKGTDAIRSIRVDLSSFRKLKLSPHVFAKMTNLRYLDF-IGK-YDLE------- 613

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
                     LP GL   P  LRY+ W  YPL++ P  F  KNLV L+   S+VE  W G
Sbjct: 614 ---------LLPQGLQSFPTDLRYICWIHYPLKSFPKKFSGKNLVILDFSHSRVENLWCG 664

Query: 436 ------------------------EKAC---------------VPSSIQNFKYLSALSFK 456
                                    KA                V  SI + + L  L   
Sbjct: 665 VQDLVNLKEVRLTSSRFLKELPDFSKATNLKVLNITDCLSLESVHPSIFSLEKLVQLDLS 724

Query: 457 GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTD 516
            C SL +F SN H    + +N   C++L  F   +  + +L L    I E+PS   C + 
Sbjct: 725 HCFSLTTFTSNSHLSSLLYLNLGSCISLRTFSVTTNNLIKLDLTDIGINELPSLFRCQSK 784

Query: 517 LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
           LE+L LR  + ++ I +S   L  L  L +  CL L   P
Sbjct: 785 LEILVLRKSE-IEIIPSSIQNLTRLRKLDIRYCLKLLALP 823



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 61/285 (21%)

Query: 459 QSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ-ISGKVTRLYLGQSAIEEVPSSIECLTDL 517
           Q L+SFP++L ++C +         L  FP+  SGK                      +L
Sbjct: 617 QGLQSFPTDLRYICWIH------YPLKSFPKKFSGK----------------------NL 648

Query: 518 EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
            +LD        R+   +C ++ LV L            E+        R+ S R  + E
Sbjct: 649 VILDFSHS----RVENLWCGVQDLVNL-----------KEV--------RLTSSRF-LKE 684

Query: 578 LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLR 636
           LP  F     L+VL + DC  L+++  +I SLE L  + L+   +++   S+  LS++L 
Sbjct: 685 LPD-FSKATNLKVLNITDCLSLESVHPSIFSLEKLVQLDLSHCFSLTTFTSNSHLSSLL- 742

Query: 637 SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL 696
            L+   C  L    RTF +  + +  L ++D  + E+P      S LEIL L  +  E +
Sbjct: 743 YLNLGSCISL----RTFSVTTNNLIKLDLTDIGINELPSLFRCQSKLEILVLRKSEIEII 798

Query: 697 PAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           P+ I+ +++LR + +     L +LP LPL ++ L L++C  L+++
Sbjct: 799 PSSIQNLTRLRKLDIRYCLKLLALPVLPLSVETL-LVECISLKTV 842



 Score = 43.1 bits (100), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 127/333 (38%), Gaps = 77/333 (23%)

Query: 644 KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
           +GL+SFP      L  +  +H   Y ++  P++ +   +L IL  S +  E+L   ++ +
Sbjct: 617 QGLQSFPT----DLRYICWIH---YPLKSFPKKFSG-KNLVILDFSHSRVENLWCGVQDL 668

Query: 704 SQLRFIHLEDFNMLQSLPELPLC--LKYLHLIDCKMLQSLPVLPFCLE---SLDLTGCNM 758
             L+ + L     L+ LP+      LK L++ DC  L+S+    F LE    LDL+ C  
Sbjct: 669 VNLKEVRLTSSRFLKELPDFSKATNLKVLNITDCLSLESVHPSIFSLEKLVQLDLSHCFS 728

Query: 759 LRSLPELPL--CLQYLNLEDCNMLRS--------------------LPELPLC---LQLL 793
           L +         L YLNL  C  LR+                    LP L  C   L++L
Sbjct: 729 LTTFTSNSHLSSLLYLNLGSCISLRTFSVTTNNLIKLDLTDIGINELPSLFRCQSKLEIL 788

Query: 794 TVR------------NCNRLQSLPEILLCLQELDASVL----EKLSKHSPDLQWA----- 832
            +R            N  RL+ L +I  CL+ L   VL    E L      L+       
Sbjct: 789 VLRKSEIEIIPSSIQNLTRLRKL-DIRYCLKLLALPVLPLSVETLLVECISLKTVLFPST 847

Query: 833 -PESLKSAAICFEFTNCLKL----------NGKAN-NKILADSLLRIRHMAIASLRLGYE 880
             E  K      EF NC  L          N K N  K     LL + H         YE
Sbjct: 848 ISEQFKENKKRIEFWNCFNLDEHSLVNIGFNMKINLIKFAYQHLLTLEHDDYVDSYADYE 907

Query: 881 MAINEKLSELRGSLIVLPGSEIPDWFSNQSSGS 913
              +        +L V PGS +P+W   ++  +
Sbjct: 908 YNHSS-----YQALYVYPGSSVPEWLEYKTESN 935


>gi|41387774|gb|AAS01763.1| TIR-NBS-LRR [Arabidopsis thaliana]
          Length = 1160

 Score =  275 bits (703), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 235/763 (30%), Positives = 362/763 (47%), Gaps = 129/763 (16%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGS-----CFVSDVR-----GNSETAGG 53
           S+ V++VGI G  GIGKTT+A+A+F + S  F+GS      FVS+ R      N +    
Sbjct: 201 SEEVRMVGISGSSGIGKTTIARALFKRLSRHFQGSTFIDRAFVSNSRNIYSGANPDDPNM 260

Query: 54  LEHLQKQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQ 112
              LQ   LS  L +K +++  P      +ER++  K+LI++DD++++  L  L+G+   
Sbjct: 261 KLQLQGHFLSEILGKKDIKIDDPAA---LEERLKHQKVLIIIDDLDDIMVLDTLVGQTQW 317

Query: 113 FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
           FG GSRI+V T DK  L     +   IY V+      A++  C  AFK+N+ P+      
Sbjct: 318 FGYGSRIIVVTNDKHFLTAHGIDH--IYEVSFPTDVHAYQMLCQSAFKQNYAPKGFEDLV 375

Query: 173 RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
             VV +    PL L +LG  L  +   +W  +L  L      +   I  IL+IS++ L  
Sbjct: 376 VDVVRHAGSFPLGLNLLGKYLRRRDMEYWMDMLPRLENGLRID-GKIEKILRISYDGLES 434

Query: 233 RVKSIFLDIACFFEGEDKDFVASILDDSE-SDVLDILIDKSLVSISGNFLNMHDILQEMG 291
             + IF  IAC F   +   + S+L DS+ S  L+ L DKSL+ +   ++ MH  LQEMG
Sbjct: 435 EDQEIFRHIACLFNHMEVTTIKSLLADSDVSFALENLADKSLIHVRQGYVVMHRSLQEMG 494

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IVR +S  +PG+R  L DP +I  +L    GT  + GI LD   I+ +++  RAF  M
Sbjct: 495 RKIVRIQSIDKPGEREFLVDPNDIHDILNACTGTQKVLGISLDTRNIRELDVHQRAFKGM 554

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
           SNLR        F EI+         +L    + LP   DYLP+ L+ L W  +P+R +P
Sbjct: 555 SNLR--------FLEIKNF-------RLKEDSLHLPPSFDYLPRTLKLLSWSKFPMRCMP 599

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGE------------------------KAC-------- 439
            +F+P+NLV+L ++ SK+ + WEG+                        KA         
Sbjct: 600 FDFRPENLVKLEMKYSKLHKLWEGDVPLTCLKEMDLYASSNLKVIPDLSKATNLEILNLQ 659

Query: 440 -------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
                  +PSSI+N   L  L    C+SL+  P+  +      +NFS+C  L  FP+ S 
Sbjct: 660 FCLSLVELPSSIRNLNKLLNLDMLDCKSLKILPTGFNLKSLDRLNFSHCSKLKTFPKFST 719

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLIL---LGC 549
            ++ L L Q+ IEE PS++  L +L    +   +   +       L   + ++L   L  
Sbjct: 720 NISVLNLSQTNIEEFPSNLH-LKNLVKFSISKEESDVKQWEGEKPLTPFLAMMLSPTLTS 778

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
           L+LE+ P ++                 ELPSSF+NL  L+ LF+  C  L+ LP  I   
Sbjct: 779 LHLENLPSLV-----------------ELPSSFQNLNQLKRLFIVRCINLETLPTGIN-- 819

Query: 610 EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKG---LESFPRTFLLGLSAMGLLHIS 666
                                    L+SLDS   KG   L SFP       + + +L++ 
Sbjct: 820 -------------------------LQSLDSLSFKGCSRLRSFPEIS----TNISVLYLD 850

Query: 667 DYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
           + A+ ++P  I   S+L    LS ++   L  +   MS+L+ +
Sbjct: 851 ETAIEDVPWWIEKFSNLT--ELSMHSCSRLKWVFLHMSKLKHL 891



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 33/189 (17%)

Query: 407 LRTLPSNFKPKNLVELNLRC--SKVEQPWEGEKAC------------------------- 439
           +   PSN   KNLV+ ++    S V+Q WEGEK                           
Sbjct: 731 IEEFPSNLHLKNLVKFSISKEESDVKQ-WEGEKPLTPFLAMMLSPTLTSLHLENLPSLVE 789

Query: 440 VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
           +PSS QN   L  L    C +L + P+ ++     +++F  C  L  FP+IS  ++ LYL
Sbjct: 790 LPSSFQNLNQLKRLFIVRCINLETLPTGINLQSLDSLSFKGCSRLRSFPEISTNISVLYL 849

Query: 500 GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC-----LNLEH 554
            ++AIE+VP  IE  ++L  L +  C RLK +     KL+ L   +   C     + L  
Sbjct: 850 DETAIEDVPWWIEKFSNLTELSMHSCSRLKWVFLHMSKLKHLKEALFPNCGKLTRVELSG 909

Query: 555 FPEILEKME 563
           +P  +E M+
Sbjct: 910 YPSGMEVMK 918



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 186/412 (45%), Gaps = 71/412 (17%)

Query: 547 LGCLNLEHFPEILEKME----HLKRIYSDRTPITEL-------PSSFENLP------GLE 589
           + C+  +  PE L K+E     L +++    P+T L        S+ + +P       LE
Sbjct: 595 MRCMPFDFRPENLVKLEMKYSKLHKLWEGDVPLTCLKEMDLYASSNLKVIPDLSKATNLE 654

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
           +L ++ C  L  LP +I +L  L  + +    ++  LP+   L ++ R L+ SHC  L++
Sbjct: 655 ILNLQFCLSLVELPSSIRNLNKLLNLDMLDCKSLKILPTGFNLKSLDR-LNFSHCSKLKT 713

Query: 649 FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFES---------LPAI 699
           FP+ F   +S   +L++S   + E P  + +L +L    +S    +           P +
Sbjct: 714 FPK-FSTNIS---VLNLSQTNIEEFPSNL-HLKNLVKFSISKEESDVKQWEGEKPLTPFL 768

Query: 700 IKQMS-QLRFIHLEDFNMLQSLPELPLC------LKYLHLIDCKMLQSLP--VLPFCLES 750
              +S  L  +HLE+   L SL ELP        LK L ++ C  L++LP  +    L+S
Sbjct: 769 AMMLSPTLTSLHLEN---LPSLVELPSSFQNLNQLKRLFIVRCINLETLPTGINLQSLDS 825

Query: 751 LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQL------LTVRNCNRLQSL 804
           L   GC+ LRS PE+   +  L L++     ++ ++P  ++       L++ +C+RL+ +
Sbjct: 826 LSFKGCSRLRSFPEISTNISVLYLDET----AIEDVPWWIEKFSNLTELSMHSCSRLKWV 881

Query: 805 PEILLCLQELDASVLEKLSKHSP-DLQWAPESLKSAAICFEFTNCLKLNGKANN-KILAD 862
              +  L+ L  ++     K +  +L   P  ++                KA+N    + 
Sbjct: 882 FLHMSKLKHLKEALFPNCGKLTRVELSGYPSGMEVM--------------KADNIDTASS 927

Query: 863 SLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSS 914
           SL ++    +    L  E  ++ + S +   ++     E+P +F+ +++GSS
Sbjct: 928 SLPKVVLSFLDCFNLDPETVLHHQESIIFNYMLFTGKEEVPSYFTYRTTGSS 979


>gi|356514859|ref|XP_003526120.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1146

 Score =  275 bits (703), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 228/684 (33%), Positives = 354/684 (51%), Gaps = 64/684 (9%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           ++ V++VGI GMGGIGK+TL +A++++ SH+F   C++ DV    +  G L  +QKQ+LS
Sbjct: 220 ANDVRVVGITGMGGIGKSTLGRALYERISHQFNSLCYIDDVSKLYQGYGTL-GVQKQLLS 278

Query: 64  TTLSEK-LEVAGPNIPHFT---KERVRRMKLLIVLDDVNEVGQLKRLIG-ELDQF----G 114
            +L+E+ LE+   N+   T    +R+   K LIVLD+V++  QL    G  +D      G
Sbjct: 279 QSLNERNLEIC--NVSDGTLLAWKRLSNAKALIVLDNVDQDKQLDMFTGGRVDLLRKCLG 336

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
           +GS +++ +RDK++L K  G +  IY+V  L  E+A   FC  AFK N+   D    +  
Sbjct: 337 RGSIVIIISRDKQIL-KAHGVDV-IYQVKPLNDEDAARLFCRKAFKSNYIVSDFEKMTGD 394

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
            + + +G+PL +EVLGSSL  K  SHW   L  L R+ +S+  +I ++L+ISF++L    
Sbjct: 395 ALLHCQGHPLAIEVLGSSLFDKDVSHWRSALASL-RVNKSK--NIMNVLRISFDQLEDTH 451

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMG 291
           K IFLDIACFF G   + V  +LD    ++   L +LIDKS ++ +   ++MHD+L ++G
Sbjct: 452 KEIFLDIACFFNGRYVEGVKEVLDFRGFNLEYGLQVLIDKSFITATFK-IHMHDLLCDLG 510

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           + IVR++S  +P K SRLWD K+  +V+  N   + +E I + ++   G  +     + M
Sbjct: 511 KCIVREKSPTKPRKWSRLWDFKDFYKVMSDNMPAENVEAIVVQMNHHHGTTMGVDGLSTM 570

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
           S+L+L +                 E  +  SK +    L  L  +L YL W  YP + LP
Sbjct: 571 SHLKLLQL----------------ESSIPDSKRKFSGMLVNLSNELGYLKWIFYPFKCLP 614

Query: 412 SNFKPKNLVELNLRCSKVEQPWEG---EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            +F+P  LVEL LR S +++ W+G   +K    S I +  YL  L+ +GC  L+    ++
Sbjct: 615 PSFEPDKLVELILRHSNIKKLWKGRKKQKKAQMSYIGDSLYLETLNLQGCIQLKEIGLSI 674

Query: 469 HFVCPVT-INFSYCVNLIEFPQISGKVTRLYL---GQSAIEEVPSSIECLTDLEVLDLRG 524
                ++ ++   C  LI  P+    +    L   G   +  + SSI  L  L  LDL+ 
Sbjct: 675 VLSRRLSYLDLKDCKCLINLPRFGEDLILQILVLEGCQKLRHIDSSIGLLKKLRRLDLKN 734

Query: 525 CKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILE--KMEHLKRIYSDRTPIT-ELPSS 581
           CK L  +  S   L SL  L L GC  L +   + E    EHLK+I  D  PI  +  SS
Sbjct: 735 CKNLVSLPNSILGLNSLECLNLSGCSKLYNIQLLYELRDAEHLKKIDIDGAPIHFQSTSS 794

Query: 582 FEN---------------LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLP 626
           +                  P +  L +  C+ L  +PD IG +  L  +  + +    LP
Sbjct: 795 YSRQHKKSVGCLMPSSPIFPCMCELDLSFCN-LVQIPDAIGIICCLEKLDLSGNNFVTLP 853

Query: 627 SSVALSNMLRSLDSSHCKGLESFP 650
           +   LS +  SL   HCK L+S P
Sbjct: 854 NLKKLSKLF-SLKLQHCKKLKSLP 876



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 170/410 (41%), Gaps = 68/410 (16%)

Query: 588  LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
            L  L ++DC  L NLP     L     +L     +  + SS+ L   LR LD  +CK L 
Sbjct: 680  LSYLDLKDCKCLINLPRFGEDLILQILVLEGCQKLRHIDSSIGLLKKLRRLDLKNCKNLV 739

Query: 648  SFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
            S P + +LGL+++  L++S  +     Q +  L   E  +L   + +  P   +  S   
Sbjct: 740  SLPNS-ILGLNSLECLNLSGCSKLYNIQLLYELRDAE--HLKKIDIDGAPIHFQSTSSYS 796

Query: 708  FIHLEDFNMLQSLPELPL--CLKYLHLIDCKMLQSLPVLPF--CLESLDLTGCNMLRSLP 763
              H +    L  +P  P+  C+  L L  C ++Q    +    CLE LDL+G N + +LP
Sbjct: 797  RQHKKSVGCL--MPSSPIFPCMCELDLSFCNLVQIPDAIGIICCLEKLDLSGNNFV-TLP 853

Query: 764  ELPLC--LQYLNLEDCNMLRSLPELPLCLQLLT-VRNCNRLQSLPEILLCLQELDASVLE 820
             L     L  L L+ C  L+SLPELP  + L T   +C RL                   
Sbjct: 854  NLKKLSKLFSLKLQHCKKLKSLPELPSRIDLPTDAFDCFRLM------------------ 895

Query: 821  KLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYE 880
                        P   K+  I     NC +L  +     +A S +      I   ++ ++
Sbjct: 896  -----------IPSYFKNEKIGLYIFNCPELVDRDRCTDMALSWM------ILISQVQFK 938

Query: 881  MAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSK 940
            +  N ++        V  GSEIP WF+NQ  G+ + +   P     N IG AFC +    
Sbjct: 939  LPFNRRIQS------VTTGSEIPRWFNNQHEGNCVSLDASPVMHDHNWIGVAFCLMFVVP 992

Query: 941  K--------VDSDCFRYFY-----VSFQFDLEIK-TLSETKHVDLGYNSR 976
                      DSDC  + +     V F  DL+++  L ++ H+ L + SR
Sbjct: 993  HETLSAMGFSDSDCPPWHFFGDIPVDFYGDLDLELVLDKSDHMWLFFVSR 1042


>gi|5302806|emb|CAB46047.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268445|emb|CAB80965.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1103

 Score =  275 bits (703), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 233/772 (30%), Positives = 380/772 (49%), Gaps = 88/772 (11%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQK 59
           ++S +   +VGIWG  GIGK+T+ +A+F Q S +F    F++      S+ +G     +K
Sbjct: 196 LESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWEK 255

Query: 60  QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           ++LS  L +K       I HF   ++R++  K+LI+LDDV+ +  L+ L+G+ + FG GS
Sbjct: 256 ELLSEILGQK----DIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLRTLVGKAEWFGSGS 311

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+V T+D+++L+    E   IY V       A +  C +AF +   P+D    +  V  
Sbjct: 312 RIIVITQDRQLLKAH--EIDLIYEVKLPSQGLALKMICQYAFGKYSPPDDFKELAFEVAK 369

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                PL L VLGSSL  + K  W ++L +L         DI   L++S+ +L P+ + I
Sbjct: 370 LAGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLN---RDIMKTLRVSYVRLDPKDQDI 426

Query: 238 FLDIACFFEGEDKDFVASILDD--SESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQI 294
           F  IA  F G     +   L D  + +  L  L DKSL+ ++ N  + MH++LQ++  +I
Sbjct: 427 FHYIAWLFNGWKVKSIKDFLGDGVNVNIRLKTLDDKSLIRLTPNDTIEMHNLLQKLATEI 486

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGIN-----LDPRAFT 349
            R+ES   PGKR  L + +EI  V   N GT+ + GI    S    I+     +D  +F 
Sbjct: 487 DREESNGNPGKRRFLENAEEILDVFTDNTGTEKLLGIDFSTSSDSQIDKPFISIDENSFQ 546

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
            M NL+    +   ++            Q   ++++LPNGL YLP+KL++L W+  PL+ 
Sbjct: 547 GMLNLQFLNIHDHYWW------------QPRETRLRLPNGLVYLPRKLKWLRWENCPLKR 594

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGE------KACVPSSIQNFKYLSALSFK------- 456
           LPSNFK + LVEL +  S +E+ W G       K     +  N K +  LS         
Sbjct: 595 LPSNFKAEYLVELRMENSALEKLWNGTQPLGSLKKMNLRNSNNLKEIPDLSLATNLEELD 654

Query: 457 --GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIE-EVPSSIEC 513
              C+ L SFPS L+      +N   C  L  FP+I   + + ++    IE EV    +C
Sbjct: 655 LCNCEVLESFPSPLNSESLKFLNLLLCPRLRNFPEI---IMQSFIFTDEIEIEVA---DC 708

Query: 514 L--TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YS 570
           L   +L  LD   C  L+R + S  +   L  L + G   LE   E ++ +  LKR+  S
Sbjct: 709 LWNKNLPGLDYLDC--LRRCNPSKFRPEHLKNLTVRGNNMLEKLWEGVQSLGKLKRVDLS 766

Query: 571 DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSV 629
           +   + E+P        LE+L + +C  L  LP  IG+L+ LY + +   + +  LP  +
Sbjct: 767 ECENMIEIP-DLSKATNLEILDLSNCKSLVMLPSTIGNLQKLYTLNMEECTGLKVLPMDI 825

Query: 630 ALSNMLRSLDSSHCKGLESFPRTFLLGLS-AMGLLHISDYAVREIP--QEIAYL------ 680
            LS    SL + H KG  S    F+  +S ++ +L++ D A+ E+P  +  + L      
Sbjct: 826 NLS----SLHTVHLKGCSSL--RFIPQISKSIAVLNLDDTAIEEVPCFENFSRLMELSMR 879

Query: 681 ------------SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSL 720
                       +S++ L L+    E +P  I++ S+L+ +++    ML+++
Sbjct: 880 GCKSLRRFPQISTSIQELNLADTAIEQVPCFIEKFSRLKVLNMSGCKMLKNI 931



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 36/165 (21%)

Query: 389 GLDYLPKKLRYLHWDTYPLRTLPS-NFKP---KNLVELNLRCSKVEQPWEGEKACVPSSI 444
           GL  LP  +      T  L+   S  F P   K++  LNL  + +E+        VP   
Sbjct: 817 GLKVLPMDINLSSLHTVHLKGCSSLRFIPQISKSIAVLNLDDTAIEE--------VPC-F 867

Query: 445 QNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAI 504
           +NF  L  LS +GC+SLR                        FPQIS  +  L L  +AI
Sbjct: 868 ENFSRLMELSMRGCKSLR-----------------------RFPQISTSIQELNLADTAI 904

Query: 505 EEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
           E+VP  IE  + L+VL++ GCK LK IS +  +L  L+ +    C
Sbjct: 905 EQVPCFIEKFSRLKVLNMSGCKMLKNISPNIFRLTRLMKVDFTDC 949


>gi|356561383|ref|XP_003548961.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1003

 Score =  275 bits (703), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 196/532 (36%), Positives = 276/532 (51%), Gaps = 43/532 (8%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNIP 78
           KTT+A+A+++    +FEG CF+ D+R  +    GL  LQ+ +LS TL EK ++V   N  
Sbjct: 229 KTTIARAVYNMSFSKFEGICFLPDIREKAINKHGLVELQEMLLSETLKEKDIKVGHVNKG 288

Query: 79  -HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
               K+R+++ K+L++LDDV+++ QLK L G+ D FG GS I++TTRDK +L     E  
Sbjct: 289 IQIIKQRLQQKKVLLILDDVDKLEQLKVLAGQYDWFGSGSIIIITTRDKHLLATH--EVV 346

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           K+Y V  L  E++ E F   AFK N         S   VSY  G PL LEV+GS L  K 
Sbjct: 347 KLYEVKPLNDEKSLELFDWHAFKNNKTDPSYVTISNRAVSYACGLPLALEVIGSDLFGKS 406

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
            +     L    RI   +IH+I+   K+S++ L    K IFLDIACF       +V  +L
Sbjct: 407 LNECNSALDKYERIPHEKIHEIF---KVSYDGLEENEKGIFLDIACFLNTFKVSYVTQML 463

Query: 258 DDS---ESDVLDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
                   D L +L+DKSLV I +  F+ MHD++++ G +IVRQES  EPG+RSRLW  +
Sbjct: 464 HAHGFHPEDGLRVLVDKSLVKIDASGFVRMHDLIRDTGIEIVRQESTVEPGRRSRLWFKE 523

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           +I  VL+ N GTD IE I L+      +  + +AF  M NLR+                 
Sbjct: 524 DIVHVLEENTGTDKIEFIKLEGYNNIQVQWNGKAFQKMKNLRI----------------- 566

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNL--RCSKVEQ 431
                L         G ++LP  LR+L W  YP  +LPS+F PK +  L +   C K+ Q
Sbjct: 567 -----LIIENTTFSTGPEHLPNSLRFLDWSCYPSPSLPSDFNPKRVEILKMPESCLKIFQ 621

Query: 432 PWEGEKACVPSSIQNFK--YLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
           P    K     SI NFK   L  LS KGC  L+     +       ++   C+ L  FP+
Sbjct: 622 P---HKMLESLSIINFKGCKLLTLSAKGCSKLKILAHCIMLTSLEILDLGDCLCLEGFPE 678

Query: 490 I---SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
           +     K+  + L  +AI  +P SI  L  LE+L L  CKRL ++  S   L
Sbjct: 679 VLVKMEKIREICLDNTAIGTLPFSIGNLVGLELLSLEQCKRLIQLPGSIFTL 730



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 9/105 (8%)

Query: 514 LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL---------GCLNLEHFPEILEKMEH 564
           L  L +++ +GCK L   +    KL+ L   I+L          CL LE FPE+L KME 
Sbjct: 626 LESLSIINFKGCKLLTLSAKGCSKLKILAHCIMLTSLEILDLGDCLCLEGFPEVLVKMEK 685

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
           ++ I  D T I  LP S  NL GLE+L +E C +L  LP +I +L
Sbjct: 686 IREICLDNTAIGTLPFSIGNLVGLELLSLEQCKRLIQLPGSIFTL 730


>gi|227438285|gb|ACP30632.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1238

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 220/689 (31%), Positives = 329/689 (47%), Gaps = 86/689 (12%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ +GIWGM GIGKTTLAKA+FDQ S  +E   F+      +    GL  L ++     L
Sbjct: 221 IRRLGIWGMPGIGKTTLAKAVFDQISGGYEAFFFIKHF-DKAFNEKGLHCLLEEHFGNIL 279

Query: 67  SEKLEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
            +   V      P F  + + + + L+VLDDV      +  +G    FG GS I++T+RD
Sbjct: 280 MDLPRVCSSITRPSFPGDILSKKRTLVVLDDVQNPLVAESFLGGFHWFGPGSLIIITSRD 339

Query: 126 KRVLEKFRG-EEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           K+V   FR  +   +Y V  L   EA + F + A  EN   +     S  V+ Y  GNPL
Sbjct: 340 KQV---FRHCQINHVYEVQSLNENEALQLFSHHAIGENIREKKFMKLSMEVIDYASGNPL 396

Query: 185 VLEVLGSSLCLKRKSHWGKVL--HDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
            L   G  L  K+ S        H L        + I D+ K S+  L    K+IFLDIA
Sbjct: 397 ALSYYGKELKGKKLSEMRTTFLKHKLRTP-----YKIQDLFKRSYEALNDSEKNIFLDIA 451

Query: 243 CFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
           CFF+GE+ D+V  +L+         +D+L++K LV+IS N + MH I+Q+ GR+I+  E 
Sbjct: 452 CFFKGENVDYVMQLLEGCGFLPHIGIDVLVEKCLVTISENRVKMHRIIQDFGREIINGEV 511

Query: 300 EKEPGKRSRLWDPKEISRVLKHNK-------------GTDAIEGIFLDLSKIKGINLDPR 346
             +  +R RLW+P  I  +L+ +K             GT  IEGIFLD S +   ++   
Sbjct: 512 -VQIERRRRLWEPWTIKFLLEDDKLKANVKSTYTRPLGTVDIEGIFLDASNL-SFDVKSG 569

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           AF +M +LR  K Y    YE +             S+V LP GLD LP +LR LHW+ YP
Sbjct: 570 AFKHMLSLRFLKIYCSS-YEKD-------------SRVLLPKGLDSLPYELRLLHWENYP 615

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA---------CVPSSIQNF------KYLS 451
           L++LP  F P +LVELNL  S++++ W G K          C    + +       + L 
Sbjct: 616 LKSLPQKFDPCHLVELNLSYSQLQKLWGGTKNLKMLKVVRLCHSQQLTDINDLCKAQDLE 675

Query: 452 ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSI 511
            L  +GC  L+SFP+         +N S C  +  FP++S  +  L+L  + I E+P S 
Sbjct: 676 LLDLQGCTQLQSFPAMGQLRLLRVVNLSGCTEIRSFPEVSPNIKELHLQGTGIRELPVST 735

Query: 512 ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM---EHLKRI 568
             L+    L+    + L  + T F  +  ++        N E    +++ +   +HL ++
Sbjct: 736 VTLSSQVKLN----RELSNLLTEFPGVSDVI--------NHERLTSLIKPVSANQHLGKL 783

Query: 569 ----YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQ 624
                 D   +T LP    +L  L+VL +  CS L+++     +LE LY    A     Q
Sbjct: 784 VRLNMKDCVHLTSLP-DMADLELLQVLDLSGCSNLNDIQGFPRNLEELYLAGTAIKEFPQ 842

Query: 625 LPSSVALSNMLRSLDSSHCKGLESFPRTF 653
           LP S+ +      L++  C  L S P  F
Sbjct: 843 LPLSLEI------LNAHGCVSLISIPIGF 865



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 153/373 (41%), Gaps = 51/373 (13%)

Query: 564 HLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAIS 623
           HL  +    + + +L    +NL  L+V+ +    +L ++ D   + +     L   + + 
Sbjct: 627 HLVELNLSYSQLQKLWGGTKNLKMLKVVRLCHSQQLTDINDLCKAQDLELLDLQGCTQLQ 686

Query: 624 QLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSL 683
             P+   L  +LR ++ S C  + SFP         +  LH+    +RE+P     LSS 
Sbjct: 687 SFPAMGQL-RLLRVVNLSGCTEIRSFPEVS----PNIKELHLQGTGIRELPVSTVTLSSQ 741

Query: 684 EILYLSGNNF-ESLPAIIKQMSQLRFIHL-EDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
             L    +N     P +   ++  R   L +  +  Q L +L      L++ DC  L SL
Sbjct: 742 VKLNRELSNLLTEFPGVSDVINHERLTSLIKPVSANQHLGKLV----RLNMKDCVHLTSL 797

Query: 742 PVLP--FCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCN 799
           P +     L+ LDL+GC+ L  +   P  L+ L L     ++  P+LPL L++L    C 
Sbjct: 798 PDMADLELLQVLDLSGCSNLNDIQGFPRNLEELYLAG-TAIKEFPQLPLSLEILNAHGCV 856

Query: 800 RLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKI 859
            L S+P              E+L ++                 + F+NC  L+ K  N  
Sbjct: 857 SLISIP-----------IGFEQLPRY-----------------YTFSNCFGLSEKVVNIF 888

Query: 860 LADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
           + ++L  +        RL  E    +KL++      + P     +   +   GSS+ IQL
Sbjct: 889 VKNALTNVE-------RLAREYHQQQKLNKSLAFSFIGPSPAGENLTFDMQPGSSVIIQL 941

Query: 920 PPHSSCRNLIGFA 932
              SS R+ +G A
Sbjct: 942 G--SSWRDTLGVA 952


>gi|356506795|ref|XP_003522161.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1088

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 200/587 (34%), Positives = 297/587 (50%), Gaps = 65/587 (11%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           +S+ V ++GIWGMGGIGKTT+AKAI+++    FEG  F+  + G       +   Q+Q+L
Sbjct: 228 NSNDVLLLGIWGMGGIGKTTIAKAIYNKIGRNFEGRSFLEQI-GELWRQDAI-RFQEQLL 285

Query: 63  STTLSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
                 K ++    +     KER+   ++ +VLDDVN+V QL  L G  + FG GSRI++
Sbjct: 286 FDIYKTKRKIHNVELGKQALKERLCSKRVFLVLDDVNDVEQLSALCGSREWFGSGSRIII 345

Query: 122 TTRDKRVLEKFRGEE-KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           TTRDK +L   RG+   K+Y +  ++  E+ E F   AFK+    E     S  V+ Y+ 
Sbjct: 346 TTRDKHIL---RGDRVDKMYTMKEMDESESIELFSWHAFKQASPREGFTELSNDVIEYSG 402

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFL 239
           G PL L VLG  L   +   W  VL  L RI   ++      LKIS++ L+    + IFL
Sbjct: 403 GLPLALTVLGCHLFDMKIIEWKTVLDKLKRIPHDQVQKK---LKISYDGLSDDTERDIFL 459

Query: 240 DIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIV 295
           DIACFF G D++    IL+       + + +L+++SLV++   N L MHD+L++MGR+I+
Sbjct: 460 DIACFFIGMDRNDAMCILNGCGLFAENGIRVLVERSLVTVDDKNKLGMHDLLRDMGREII 519

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           R +S K+  +RSRLW  +++  VL    GT  IEG+ L L           AF  M  LR
Sbjct: 520 RAKSPKDLEERSRLWFNEDVLDVLAKKTGTKTIEGLALKLPLTNSNCFSTEAFKEMKKLR 579

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
           L                      L  + VQL    +YL K LR+L W+ +PL+ +P NF 
Sbjct: 580 L----------------------LQLAGVQLDGDFEYLSKDLRWLCWNGFPLKCIPKNFH 617

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
             +LV + L  S V+  W+          Q  + L  L+     +L   P          
Sbjct: 618 QGSLVSIELENSNVKLVWK--------EAQLMEKLKILNLSHSHNLTQTP---------- 659

Query: 476 INFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF 535
            +FS   NL +   I     RL+       EV  ++  L  + +++L+ C  L  +  S 
Sbjct: 660 -DFSNLPNLEKLVLID--CPRLF-------EVSHTVGHLNKILMINLKDCISLHSLPRSI 709

Query: 536 CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
            KL+SL TLIL GCL ++   E LE+ME L  + +D T IT++P S 
Sbjct: 710 YKLKSLKTLILSGCLKIDKLEEDLEQMESLMTLIADNTAITKVPFSI 756



 Score = 45.8 bits (107), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 159/384 (41%), Gaps = 74/384 (19%)

Query: 556 PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
            +++EK++ L   +S    +T+ P  F NLP LE L + DC +L  +   +G L  +  I
Sbjct: 638 AQLMEKLKILNLSHSHN--LTQTPD-FSNLPNLEKLVLIDCPRLFEVSHTVGHLNKILMI 694

Query: 616 -LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP 674
            L    ++  LP S+     L++L  S C  ++          S M L+   + A+ ++P
Sbjct: 695 NLKDCISLHSLPRSIYKLKSLKTLILSGCLKIDKLEEDLEQMESLMTLI-ADNTAITKVP 753

Query: 675 QEIAYLSSLEILYLSGNNFESL-----PAII-KQMSQLRFI--HLEDFNMLQSLPELPLC 726
             I  ++S  I Y+S   +E       P+II   MS +  +  H++ F  + S       
Sbjct: 754 FSI--VTSKSIGYISMCGYEGFSCDVFPSIILSWMSPMSSLSSHIQTFAGMPS------- 804

Query: 727 LKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPEL 786
                             P  L   + +  N+L    +LP  L+ L +E C   R L   
Sbjct: 805 ------------------PISLHVANNSSHNLLSIFEDLPK-LRSLWVE-CGTKRQLS-- 842

Query: 787 PLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHS--PDLQWAPESLKSAAICFE 844
                          Q    IL  L  +++  LE ++  S  P++        +A+   E
Sbjct: 843 ---------------QETTIILDALYAINSKALESVATTSQLPNV--------NASTLIE 879

Query: 845 FTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPD 904
             N + ++G  ++  L   L+++      +  L +++  N   SE  G L  LPG   PD
Sbjct: 880 CGNQVHISGSKDS--LTSLLIQMGMSCQIAHILKHKILQNMNTSENGGCL--LPGDRYPD 935

Query: 905 WFSNQSSGSSICIQLPPHSSCRNL 928
           W++  S  SS+  ++ P  + RNL
Sbjct: 936 WWTFHSEDSSVIFEI-PQVNKRNL 958


>gi|237769815|dbj|BAH59426.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1217

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 214/713 (30%), Positives = 344/713 (48%), Gaps = 98/713 (13%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           D     +I+G+ GM GIGKTTL K ++  +  +F     +  +R  S+      HL+   
Sbjct: 224 DKYKGTRIIGVVGMPGIGKTTLLKELYKTWQGKFSRHALIDQIRVKSK------HLELDR 277

Query: 62  LSTTLSEKLEVAGPNIPHFTK-----ERVRRMKLLIVLDDVN---EVGQLKRLIGELDQF 113
           L   L    E++  N PH         ++   K+L+VLDDV+   ++  L+ ++  + + 
Sbjct: 278 LPQMLLG--ELSKLNNPHVDNLKDPYSQLHERKVLVVLDDVSKREQIDALREILDWIKEG 335

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAF---KENHCPEDLNW 170
            +GSR+V+ T D  +     G     Y V  L   ++ + F   AF   + N   +D   
Sbjct: 336 KEGSRVVIATSDMSLT---NGLVDDTYMVQNLNHRDSLQLFHYHAFIDDQANPQKKDFMK 392

Query: 171 HSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
            S   V Y +G+PL L+VLG  L  K   HW      + ++ +S   +I  + ++S+++L
Sbjct: 393 LSEGFVHYARGHPLALKVLGGELNKKSMDHWNS---KMKKLAQSPSPNIVSVFQVSYDEL 449

Query: 231 TPRVKSIFLDIACFFEGEDKDFVASILDDSE------SDVLDILIDKSLVSISGNFLNMH 284
           T   K  FLDIACF   +DKD+V S+L  S+         +  L DK L++     + MH
Sbjct: 450 TTAQKDAFLDIACF-RSQDKDYVESLLASSDLGSAEAMSAVKSLTDKFLINTCDGRVEMH 508

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISR-----VLKHNKGTDAIEGIFLDLSKIK 339
           D+L +  R+I  + S ++  ++ RLW  + I +     VL++      + GIFLDLS+++
Sbjct: 509 DLLYKFSREIDLKASNQDGSRQRRLWLHQHIIKGGIINVLQNKMKAANVRGIFLDLSEVE 568

Query: 340 G-INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLR 398
              +LD   F NM NLR  KFY           S   +E  + +K+ +P+ L    K++R
Sbjct: 569 DETSLDRDHFINMGNLRYLKFY----------NSHCPQECKTNNKINIPDKLKLPLKEVR 618

Query: 399 YLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK--------------------- 437
            LHW  +PL TLP++F P NLV+L L  S++EQ WEG+K                     
Sbjct: 619 CLHWLKFPLETLPNDFNPINLVDLKLPYSEMEQLWEGDKDTPCLRWVDLNHSSKLCSLSG 678

Query: 438 -------------ACV-----PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
                         C      P  ++  K L+ L+ KGC SL S P  ++ +   T+  S
Sbjct: 679 LSKAEKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPE-MNLISLKTLTLS 737

Query: 480 YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
            C    EFP IS  +  LYL  +AI ++P ++E L  L VL+++ CK L+ I     +L+
Sbjct: 738 GCSTFKEFPLISDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELK 797

Query: 540 SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
           +L  LIL  CLNL+ FPEI   +  L  +  D T I  +P     LP ++ L +   +K+
Sbjct: 798 ALQELILSDCLNLKIFPEI--DISFLNILLLDGTAIEVMP----QLPSVQYLCLSRNAKI 851

Query: 600 DNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
             LP  I  L  L ++ L   ++++ +P        L+ LD+  C  L++  +
Sbjct: 852 SCLPVGISQLSQLKWLDLKYCTSLTSVPE---FPPNLQCLDAHGCSSLKTVSK 901



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 190/456 (41%), Gaps = 74/456 (16%)

Query: 616  LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
            L   + +   P  +    ML  L+   C  LES P   L+ L  + L   S +  +E P 
Sbjct: 690  LEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEMNLISLKTLTLSGCSTF--KEFP- 746

Query: 676  EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH---L 732
                  ++E LYL G     LP  ++++ +L  ++++D  ML+ +P     LK L    L
Sbjct: 747  --LISDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELIL 804

Query: 733  IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP----LCL------------------- 769
             DC  L+  P +     ++ L     +  +P+LP    LCL                   
Sbjct: 805  SDCLNLKIFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQLSQL 864

Query: 770  QYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDL 829
            ++L+L+ C  L S+PE P  LQ L    C+ L+++ + L       A ++     HS   
Sbjct: 865  KWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPL-------ARIMPTEQNHS--- 914

Query: 830  QWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSE 889
                         F FTNC  L   A  +I + +  + + ++ A  R    +      S 
Sbjct: 915  ------------TFIFTNCENLEQAAKEEITSYAQRKCQLLSYARKRYNGGLVSESLFS- 961

Query: 890  LRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRY 949
                    PG E+P WF +++ GS + ++L PH   + L G A CAV+          R 
Sbjct: 962  -----TCFPGCEVPSWFCHETVGSELEVKLLPHWHDKKLAGIALCAVVSCLDPQDQVSR- 1015

Query: 950  FYVSFQFDLEIKTLSETKHV-DLGYNSRY--IEDLIDSDRVILGFKPCLNV------GFP 1000
              V+  F ++ +  S   +   +G  +R+   +D I+ D V +G+  C +       G  
Sbjct: 1016 LSVTCTFKVKDEDKSWVPYTCPVGSWTRHGGGKDKIELDHVFIGYTSCPHTIKCHEEGNS 1075

Query: 1001 DGYHHTIATFKF-----FAERKFYKIKRCGLCPVYA 1031
            D  + T A+ KF      +E   YK+ +CGL  VYA
Sbjct: 1076 DECNPTEASLKFTVTGGTSENGKYKVLKCGLSLVYA 1111


>gi|357468599|ref|XP_003604584.1| Disease resistance-like protein [Medicago truncatula]
 gi|355505639|gb|AES86781.1| Disease resistance-like protein [Medicago truncatula]
          Length = 684

 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 172/426 (40%), Positives = 249/426 (58%), Gaps = 29/426 (6%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPN-IP 78
           KTT+AK +FDQ   E++G CF+S+V    ++ G +  L++ + S  L+E +++   N + 
Sbjct: 213 KTTIAKELFDQICSEYDGCCFMSNVSLGLQSRG-ITFLKEMLFSNLLNEDVKIDSSNGLS 271

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
           +    R+ RMK+LIVLDD+ E G L+ L G LD F   SRI+VT+RDK+VL     ++  
Sbjct: 272 NNIHRRIDRMKVLIVLDDIKEEGLLEMLFGTLDWFRSDSRIIVTSRDKQVLIANEVDDDD 331

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR- 197
           +Y V  L   +A   F   AFKE+H        S+ VV Y KG PLVL+VLG     K  
Sbjct: 332 VYEVGVLNSSDALALFNLNAFKESHLEIKYYDLSKKVVDYAKGIPLVLKVLGHMFRGKHN 391

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGED--KDFVAS 255
           K  W   ++ L ++ +  I +I  ++++S++ L    +  FLDIACFF G +   D++  
Sbjct: 392 KKTW---VYQLEKLEKVPIQEIDKVMRLSYDDLDLLEQKYFLDIACFFNGLNLKVDYMKL 448

Query: 256 ILDDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSRL 309
           +L D ESD      L+ L DK+L++IS  N ++MHD  Q+MGR++VR ES K+P K+SRL
Sbjct: 449 LLKDYESDNSVAVGLERLKDKALITISEDNVISMHDFQQKMGREVVRLESIKDPSKQSRL 508

Query: 310 WDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEK 369
           WDP +I  VL+++KGTDAI  I ++LS +  + L P  F  M+NL+   F+    Y+ + 
Sbjct: 509 WDPDDICYVLENDKGTDAIRSIRVNLSSVWMLKLSPHVFAKMTNLKFLNFFGG--YDNDC 566

Query: 370 LPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKV 429
           L               LP GL   P  LRYL W  YPL++ P NF  +NLV LNLR SKV
Sbjct: 567 LD-------------LLPRGLQSFPNDLRYLRWVCYPLKSFPENFSAENLVILNLRYSKV 613

Query: 430 EQPWEG 435
           E+ W G
Sbjct: 614 EKLWCG 619


>gi|357436335|ref|XP_003588443.1| Disease resistance-like protein [Medicago truncatula]
 gi|355477491|gb|AES58694.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1057

 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 217/653 (33%), Positives = 323/653 (49%), Gaps = 88/653 (13%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S D V +VGI+G+GG+GK+TLA+AI++  + +FEG CF+ DVR NS  +  L+HLQ+++L
Sbjct: 214 SDDGVHMVGIYGIGGLGKSTLARAIYNFIADQFEGLCFLHDVRENSAISN-LKHLQEKLL 272

Query: 63  --STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             +T L  KL+     IP   KER+ R K+L++LDDVN++ QL  L G LD FG GSR+V
Sbjct: 273 LKTTGLEIKLDHVSEGIP-IIKERLCRKKILLILDDVNDIKQLHALAGGLDWFGYGSRVV 331

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           VTTRDK++L     E    + V GL   EA E     AFK +  P   N      V+Y  
Sbjct: 332 VTTRDKQLLTCHGIES--THEVEGLYGTEALELLSWMAFKNDPVPSIYNEILIRAVAYAS 389

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PLVLE++GS+L  K    W   L   ++I   EI  I   LK+S++ L    +S+FLD
Sbjct: 390 GLPLVLEIVGSNLFGKSIEEWKGTLDGYDKIPNKEIQKI---LKVSYDGLEEEEQSVFLD 446

Query: 241 IACFFEGEDKDFVASILDDSESDV----LDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
           IAC F+G + +    IL           L +L +KSL+    + + +HD++++MG+++VR
Sbjct: 447 IACCFKGYEWEDAKHILHSHYGHCITHHLGVLAEKSLIDQYYSHVTLHDMIEDMGKEVVR 506

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLR 355
           QES KEPG+RSRLW   +I  VL  N GT  +E I+++   ++  I+   +AF  M+NL+
Sbjct: 507 QESPKEPGERSRLWCQDDIVHVLNKNTGTSKVEMIYMNFHSMEPVIDQKGKAFKKMTNLK 566

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
                                E   +SK     GL YL   L+ L W  +   +L S F 
Sbjct: 567 TLVI-----------------ENGHFSK-----GLKYLRSSLKVLKWKGFTSESLSSCFS 604

Query: 416 PKNLVELNL----RCSKVEQPWEGE----------KAC-----VPSSIQNFKYLSALSFK 456
            K   ++N+     C  +    +            K C     + +S+     L  L   
Sbjct: 605 NKKFQDMNVLILDHCEYLTHISDVSGLPNLKKLSFKDCKNLITIHNSVGYLIKLEILDAM 664

Query: 457 GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIEC 513
           GC+ L+SFP  L       +  S C +L  FP++  K+T    + L +++I E+PSS + 
Sbjct: 665 GCRKLKSFPP-LQLPSLKEMELSGCWSLNSFPKLLCKMTNIENILLYETSIRELPSSFQN 723

Query: 514 LTDLEVLDLRG--------CKRLKRISTSFCKLRSLVT---------LILLGCLNL---- 552
           L+ L  L L G          ++  I  S  K  SLV          ++L  C+N+    
Sbjct: 724 LSGLSRLSLEGRGMRFPKHNGKMYSIVFSNVKALSLVNNNLSDECLPILLKWCVNVIYLN 783

Query: 553 ------EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
                 +  PE L +  HL +I        E        P L+ LF  +C+ L
Sbjct: 784 LMKSKFKTLPECLSECHHLVKINVSYCKYLEEIRGIP--PNLKELFAYECNSL 834



 Score = 47.8 bits (112), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 119/300 (39%), Gaps = 71/300 (23%)

Query: 681 SSLEILYLSGNNFESLPAII-----KQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
           SSL++L   G   ESL +       + M+ L   H E    +  +  LP  LK L   DC
Sbjct: 584 SSLKVLKWKGFTSESLSSCFSNKKFQDMNVLILDHCEYLTHISDVSGLP-NLKKLSFKDC 642

Query: 736 KML----QSLPVLPFCLESLDLTGCNMLRSLPELPL-CLQYLNLEDCNMLRSLPELPLCL 790
           K L     S+  L   LE LD  GC  L+S P L L  L+ + L  C  L S P+L LC 
Sbjct: 643 KNLITIHNSVGYL-IKLEILDAMGCRKLKSFPPLQLPSLKEMELSGCWSLNSFPKL-LC- 699

Query: 791 QLLTVRNCNRLQ-SLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCL 849
           ++  + N    + S+ E+    Q L  S L +LS     +++   + K  +I F     L
Sbjct: 700 KMTNIENILLYETSIRELPSSFQNL--SGLSRLSLEGRGMRFPKHNGKMYSIVFSNVKAL 757

Query: 850 KLNG------------------------KANNKILADSLLRIRHMAIASLR--------- 876
            L                          K+  K L + L    H+   ++          
Sbjct: 758 SLVNNNLSDECLPILLKWCVNVIYLNLMKSKFKTLPECLSECHHLVKINVSYCKYLEEIR 817

Query: 877 ---------LGYE----------MAINEKLSELRGSLIVLP-GSE-IPDWFSNQSSGSSI 915
                      YE          M +++KL E R + +  P G+E IPDWF +QS G++I
Sbjct: 818 GIPPNLKELFAYECNSLSSSSKRMLLSQKLHEARCTYLYFPNGTEGIPDWFEHQSKGNTI 877



 Score = 46.6 bits (109), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 136/346 (39%), Gaps = 81/346 (23%)

Query: 491 SGKVTRLYLG----QSAIEEVPSSIECLTDLEVLDL------RGCKRLKRISTSFCKLRS 540
           + KV  +Y+     +  I++   + + +T+L+ L +      +G K L R S    K + 
Sbjct: 535 TSKVEMIYMNFHSMEPVIDQKGKAFKKMTNLKTLVIENGHFSKGLKYL-RSSLKVLKWKG 593

Query: 541 LVTLILLGCLNLEHFPE----ILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
             +  L  C + + F +    IL+  E+L  I           S    LP L+ L  +DC
Sbjct: 594 FTSESLSSCFSNKKFQDMNVLILDHCEYLTHI-----------SDVSGLPNLKKLSFKDC 642

Query: 597 SKLDNLPDNIGSLEYLYYILAAASAIS-------QLPSSVALSNMLRSLDSSHCKGLESF 649
             L  + +++G L  L  IL A            QLPS       L+ ++ S C  L SF
Sbjct: 643 KNLITIHNSVGYLIKLE-ILDAMGCRKLKSFPPLQLPS-------LKEMELSGCWSLNSF 694

Query: 650 PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG------------------- 690
           P+  L  ++ +  + + + ++RE+P     LS L  L L G                   
Sbjct: 695 PK-LLCKMTNIENILLYETSIRELPSSFQNLSGLSRLSLEGRGMRFPKHNGKMYSIVFSN 753

Query: 691 --------NNF--ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI------D 734
                   NN   E LP ++K    + +++L    M      LP CL   H +       
Sbjct: 754 VKALSLVNNNLSDECLPILLKWCVNVIYLNL----MKSKFKTLPECLSECHHLVKINVSY 809

Query: 735 CKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNML 780
           CK L+ +  +P  L+ L    CN L S  +  L  Q L+   C  L
Sbjct: 810 CKYLEEIRGIPPNLKELFAYECNSLSSSSKRMLLSQKLHEARCTYL 855


>gi|15242354|ref|NP_199338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5459305|emb|CAB50708.1| disease resistance protein RPS4 [Arabidopsis thaliana]
 gi|10176996|dbj|BAB10246.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007838|gb|AED95221.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1217

 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 213/713 (29%), Positives = 344/713 (48%), Gaps = 98/713 (13%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           D     +I+G+ GM GIGKTTL K ++  +  +F     +  +R  S+      HL+   
Sbjct: 224 DKYKGTRIIGVVGMPGIGKTTLLKELYKTWQGKFSRHALIDQIRVKSK------HLELDR 277

Query: 62  LSTTLSEKLEVAGPNIPHFTK-----ERVRRMKLLIVLDDVN---EVGQLKRLIGELDQF 113
           L   L    E++  N PH         ++   K+L+VLDDV+   ++  L+ ++  + + 
Sbjct: 278 LPQMLLG--ELSKLNHPHVDNLKDPYSQLHERKVLVVLDDVSKREQIDALREILDWIKEG 335

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAF---KENHCPEDLNW 170
            +GSR+V+ T D  +     G     Y V  L   ++ + F   AF   + N   +D   
Sbjct: 336 KEGSRVVIATSDMSLT---NGLVDDTYMVQNLNHRDSLQLFHYHAFIDDQANPQKKDFMK 392

Query: 171 HSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
            S   V Y +G+PL L+VLG  L  K   HW      + ++ +S   +I  + ++S+++L
Sbjct: 393 LSEGFVHYARGHPLALKVLGGELNKKSMDHWNS---KMKKLAQSPSPNIVSVFQVSYDEL 449

Query: 231 TPRVKSIFLDIACFFEGEDKDFVASILDDSE------SDVLDILIDKSLVSISGNFLNMH 284
           T   K  FLDIACF   +DKD+V S+L  S+         +  L DK L++     + MH
Sbjct: 450 TTAQKDAFLDIACF-RSQDKDYVESLLASSDLGSAEAMSAVKSLTDKFLINTCDGRVEMH 508

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISR-----VLKHNKGTDAIEGIFLDLSKIK 339
           D+L +  R++  + S ++  ++ RLW  + I +     VL++      + GIFLDLS+++
Sbjct: 509 DLLYKFSREVDLKASNQDGSRQRRLWLHQHIIKGGIINVLQNKMKAANVRGIFLDLSEVE 568

Query: 340 G-INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLR 398
              +LD   F NM NLR  KFY           S   +E  + +K+ +P+ L    K++R
Sbjct: 569 DETSLDRDHFINMGNLRYLKFY----------NSHCPQECKTNNKINIPDKLKLPLKEVR 618

Query: 399 YLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK--------------------- 437
            LHW  +PL TLP++F P NLV+L L  S++EQ WEG+K                     
Sbjct: 619 CLHWLKFPLETLPNDFNPINLVDLKLPYSEMEQLWEGDKDTPCLRWVDLNHSSKLCSLSG 678

Query: 438 -------------ACV-----PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
                         C      P  ++  K L+ L+ KGC SL S P  ++ +   T+  S
Sbjct: 679 LSKAEKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPE-MNLISLKTLTLS 737

Query: 480 YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
            C    EFP IS  +  LYL  +AI ++P ++E L  L VL+++ CK L+ I     +L+
Sbjct: 738 GCSTFKEFPLISDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELK 797

Query: 540 SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
           +L  LIL  CLNL+ FPEI   +  L  +  D T I  +P     LP ++ L +   +K+
Sbjct: 798 ALQELILSDCLNLKIFPEI--DISFLNILLLDGTAIEVMP----QLPSVQYLCLSRNAKI 851

Query: 600 DNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
             LP  I  L  L ++ L   ++++ +P        L+ LD+  C  L++  +
Sbjct: 852 SCLPVGISQLSQLKWLDLKYCTSLTSVPE---FPPNLQCLDAHGCSSLKTVSK 901



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 190/456 (41%), Gaps = 74/456 (16%)

Query: 616  LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
            L   + +   P  +    ML  L+   C  LES P   L+ L  + L   S +  +E P 
Sbjct: 690  LEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEMNLISLKTLTLSGCSTF--KEFP- 746

Query: 676  EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH---L 732
                  ++E LYL G     LP  ++++ +L  ++++D  ML+ +P     LK L    L
Sbjct: 747  --LISDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELIL 804

Query: 733  IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP----LCL------------------- 769
             DC  L+  P +     ++ L     +  +P+LP    LCL                   
Sbjct: 805  SDCLNLKIFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQLSQL 864

Query: 770  QYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDL 829
            ++L+L+ C  L S+PE P  LQ L    C+ L+++ + L       A ++     HS   
Sbjct: 865  KWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPL-------ARIMPTEQNHS--- 914

Query: 830  QWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSE 889
                         F FTNC  L   A  +I + +  + + ++ A  R    +      S 
Sbjct: 915  ------------TFIFTNCENLEQAAKEEITSYAQRKCQLLSYARKRYNGGLVSESLFS- 961

Query: 890  LRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRY 949
                    PG E+P WF +++ GS + ++L PH   + L G A CAV+          R 
Sbjct: 962  -----TCFPGCEVPSWFCHETVGSELEVKLLPHWHDKKLAGIALCAVVSCLDPQDQVSR- 1015

Query: 950  FYVSFQFDLEIKTLSETKHV-DLGYNSRY--IEDLIDSDRVILGFKPCLNV------GFP 1000
              V+  F ++ +  S   +   +G  +R+   +D I+ D V +G+  C +       G  
Sbjct: 1016 LSVTCTFKVKDEDKSWVAYTCPVGSWTRHGGGKDKIELDHVFIGYTSCPHTIKCHEEGNS 1075

Query: 1001 DGYHHTIATFKF-----FAERKFYKIKRCGLCPVYA 1031
            D  + T A+ KF      +E   YK+ +CGL  VYA
Sbjct: 1076 DECNPTEASLKFTVTGGTSENGKYKVLKCGLSLVYA 1111


>gi|356532658|ref|XP_003534888.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1072

 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 223/666 (33%), Positives = 336/666 (50%), Gaps = 92/666 (13%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLS---EKLEVAGPN 76
           KTTLA+ IF++  +E+EG  F+++ R  S+  G +  L+K++ S  L    + +E+   N
Sbjct: 216 KTTLAEEIFNKLQYEYEGCYFLANEREESKNHGIIS-LKKRIFSGLLRLRYDDVEIYTEN 274

Query: 77  -IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGE 135
            +P     R+  MK+LIVLDDV++   L +L+G LD FG GSRI+VTTRD++VL+    +
Sbjct: 275 SLPDNILRRIGHMKVLIVLDDVSDSDHLGKLLGTLDNFGSGSRILVTTRDEQVLKA--KK 332

Query: 136 EKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
            KK Y +  L F++  E F   AF ++   ++    S  VV+Y KG PLV++VL   L  
Sbjct: 333 VKKTYHLTELSFDKTLELFNLNAFNQSDRQKEYYELSLRVVNYAKGIPLVVKVLAGLLHG 392

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDF--- 252
           K K  W  +L  L +I  ++   +Y+++K+S++ L  + + IFLD+ACFF   +      
Sbjct: 393 KNKEEWESLLDKLKKIPPTK---VYEVMKLSYDGLDRKEQQIFLDLACFFLRSNIMVNTC 449

Query: 253 -VASILDDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGK 305
            + S+L D+ESD      L+ L DK+L++IS  N+++MHD LQEM  +I+R+ES    G 
Sbjct: 450 ELKSLLKDTESDNSVFYALERLKDKALITISEDNYVSMHDSLQEMAWEIIRRESSI-AGS 508

Query: 306 RSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFY 365
            SRLWD  +I+  LK+ K T+ I  + +D+  +K   L    FTNMS L+          
Sbjct: 509 HSRLWDSDDIAEALKNGKNTEDIRSLQIDMRNLKKQKLSHDIFTNMSKLQFL-------- 560

Query: 366 EIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLR 425
              K+     ++ L+     L  GL +L  +LR+L+WD YPL++LP NF  + LV L   
Sbjct: 561 ---KISGKYNDDLLNI----LAEGLQFLETELRFLYWDYYPLKSLPENFIARRLVILEFP 613

Query: 426 CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLI 485
             ++++ W+G        +QN   L  +       L   P           + S   NL 
Sbjct: 614 FGRMKKLWDG--------VQNLVNLKKVDLTSSNKLEELP-----------DLSGATNLE 654

Query: 486 EFPQISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
           E          L LG  S +  V  SI  L  LE L L  CK L  I TS  KL SL  L
Sbjct: 655 E----------LKLGGCSMLTSVHPSIFSLPKLEKLFLINCKSLT-IVTSDSKLCSLSHL 703

Query: 545 ILLGCLNLEHFPEILEKMEHLKRIYSD--------------------RTPITELPSSFEN 584
            LL C NL  F  I + M+ L+  +++                    R+ I +LPSS  N
Sbjct: 704 YLLFCENLREFSLISDNMKELRLGWTNVRALPSSFGYQSKLKSLDLRRSKIEKLPSSINN 763

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
           L  L  L +  C +L  +P+    LE L      A   + L +   L   L++L+   CK
Sbjct: 764 LTQLLHLDIRYCRELQTIPELPMFLEIL-----DAECCTSLQTLPELPRFLKTLNIRECK 818

Query: 645 GLESFP 650
            L + P
Sbjct: 819 SLLTLP 824



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 197/505 (39%), Gaps = 100/505 (19%)

Query: 490 ISGKVTRLYLGQSAIEEVPS--SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL 547
           I+G  +RL+      E + +  + E +  L++ D+R  K+ K     F  +  L  L + 
Sbjct: 505 IAGSHSRLWDSDDIAEALKNGKNTEDIRSLQI-DMRNLKKQKLSHDIFTNMSKLQFLKIS 563

Query: 548 GCLN---LEHFPEILEKME-HLKRIYSDRTPITELPSSF--------------------- 582
           G  N   L    E L+ +E  L+ +Y D  P+  LP +F                     
Sbjct: 564 GKYNDDLLNILAEGLQFLETELRFLYWDYYPLKSLPENFIARRLVILEFPFGRMKKLWDG 623

Query: 583 -ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
            +NL  L+ + +   +KL+ LPD  G+       L   S ++ +  S+     L  L   
Sbjct: 624 VQNLVNLKKVDLTSSNKLEELPDLSGATNLEELKLGGCSMLTSVHPSIFSLPKLEKLFLI 683

Query: 642 HCKGLESFP-------------------RTFLLGLSAMGLLHISDYAVREIPQEIAYLSS 682
           +CK L                       R F L    M  L +    VR +P    Y S 
Sbjct: 684 NCKSLTIVTSDSKLCSLSHLYLLFCENLREFSLISDNMKELRLGWTNVRALPSSFGYQSK 743

Query: 683 LEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
           L+ L L  +  E LP+ I  ++QL  +HL+              ++Y     C+ LQ++P
Sbjct: 744 LKSLDLRRSKIEKLPSSINNLTQL--LHLD--------------IRY-----CRELQTIP 782

Query: 743 VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQ 802
            LP  LE LD   C  L++LPELP  L+ LN+ +C  L +LP LPL L+ L    C    
Sbjct: 783 ELPMFLEILDAECCTSLQTLPELPRFLKTLNIRECKSLLTLPVLPLFLKTLDASEC---I 839

Query: 803 SLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILAD 862
           SL  +LL                SP    A E LK  +    F NCL LN  +   I  +
Sbjct: 840 SLKTVLL----------------SPST--AVEQLKENSKRILFWNCLNLNIYSLAAIGQN 881

Query: 863 SLLRIRHMAIASLRLGYEMAINEKLSELRG------SLIVLPGSEIPDWFSNQSSGSSIC 916
           +   +   A   L       + E  S+ +       ++   P S +P W   ++    I 
Sbjct: 882 AQTNVMKFAGQHLSTPNHHHV-ENYSDYKDNYGSYQAVYAYPASNVPPWLEYKTRNDYII 940

Query: 917 IQL---PPHSSCRNLIGFAFCAVLD 938
           I L   PP      + GF F    D
Sbjct: 941 IDLSSAPPSPLLGFIFGFVFGESTD 965


>gi|297818518|ref|XP_002877142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322980|gb|EFH53401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1115

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 232/743 (31%), Positives = 346/743 (46%), Gaps = 132/743 (17%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAG 52
           +S  V++VGIWG  GIGKT +A+A+F++ S  F GS F+             + NS+   
Sbjct: 202 ASKEVRMVGIWGSSGIGKTIIARALFNRLSRHFHGSIFIDRAFISKSMNIYSQANSDDYN 261

Query: 53  GLEHLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGEL 110
              H+Q + LS  L +K       + H    +ER++  K+LI +DD+++   L  L+G+ 
Sbjct: 262 LKLHMQGKFLSQILDKK----DIKVYHLGAMRERLKNRKVLICIDDLDDQLVLDALVGQT 317

Query: 111 DQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNW 170
             FG GSRI+V T+DK  L   + +   IY V     E A E  C   FK+ + P+    
Sbjct: 318 HWFGCGSRIIVITKDKHFLRAHKIDH--IYEVRLPSEEAALEMLCRSTFKQKYPPDGF-L 374

Query: 171 HSRSVVSYTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNK 229
              S V+   GN PL L +L S L  + K  W  +L  L    + +I      L++S++ 
Sbjct: 375 ELASEVALRAGNLPLGLNILSSYLRGRDKKEWMDMLPRLRNGLDGKIEKT---LRVSYDG 431

Query: 230 LT-PRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHD 285
           L   + K+IF  IAC F  E  + +  +L +S+ DV   L  L+DKSL+  S + + MH 
Sbjct: 432 LNNKKDKAIFRHIACLFNREKINDIKLLLANSDLDVTIGLKNLVDKSLIHESYDIVEMHS 491

Query: 286 ILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDP 345
           +LQEMG++IVR +S  EPG+   L D K+   VL+ NKGT  + GI LD+ +I  +++  
Sbjct: 492 LLQEMGKEIVRMQS-NEPGEHEFLVDWKDTCDVLEDNKGTKNVLGISLDIDEIDEVHIHE 550

Query: 346 RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
            AF  M NL   KF+              T+ Q    +  L  G D+ P KLR L W+ Y
Sbjct: 551 NAFKGMRNLFFLKFF--------------TKRQKKEIRWHLSKGFDHFPPKLRLLSWEKY 596

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWEG------------------------------ 435
           PLR +PSNF P+NLV+L +R SK+E+ W+G                              
Sbjct: 597 PLRCMPSNFHPENLVKLVMRWSKLEKLWDGVHPLTGLKEINLWGSKNLIEIPDLSMATNL 656

Query: 436 EKAC---------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIE 486
           EK           +PSSIQ    L     + C++L   P+ ++      +N   C  L  
Sbjct: 657 EKLVLNDCSSLMEIPSSIQYLNELYDFHMERCENLEILPTGINLQSLYDLNLMGCSRLKS 716

Query: 487 FPQISGKVTRLYLGQSAIEEVPSS--IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
           FP IS  ++ L L  + IEE+PS+  +E L +L + ++R  K  +R       L  +V+ 
Sbjct: 717 FPDISSNISTLDLYGTTIEELPSNLHLENLVNLRMCEMRSGKLWER-EQPLTPLLKMVS- 774

Query: 545 ILLGCLNLEHFPEILEKMEHLKRIYSDRTP-ITELPSSFENLPGLEVLFVEDCSKLDNLP 603
                               L RIY    P + ELPSS  NL  LE L + +C  L+ LP
Sbjct: 775 ------------------PSLTRIYLSNIPTLVELPSSIHNLHKLEELSIWNCKNLETLP 816

Query: 604 DNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLL 663
             I +L+ LY                       SLD S C  L  FP       + +  L
Sbjct: 817 TGI-NLKSLY-----------------------SLDLSGCSQLRCFPDIS----TNISEL 848

Query: 664 HISDYAVREIPQEIAYLSSLEIL 686
            +++ A+ E+P  I    +L  +
Sbjct: 849 FLNETAIEEVPWWIENFINLSFI 871


>gi|13517468|gb|AAK28805.1|AF310960_1 resistance-like protein P2-A [Linum usitatissimum]
          Length = 1196

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 291/992 (29%), Positives = 439/992 (44%), Gaps = 185/992 (18%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEG--SCFVSDVRGNSETAGGLEHLQ 58
            MD  D   I+G+W MGG+GKTTLA+A +D+ +   +G    FV +V    E   G+E + 
Sbjct: 198  MDKLDDTCIIGLWEMGGVGKTTLAEACYDRVTSSNKGIKHLFVRNVNEICEKHHGVEKIV 257

Query: 59   KQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLK-RLIGELDQ-FGQ 115
             ++ S  L E  ++    NI  + +ER+ R ++ +VLD+V  + QL    +  L + F  
Sbjct: 258  HKLYSKLLDENNIDREDLNIG-YRRERLSRSRVFVVLDNVETLEQLALGYVFNLSKVFAA 316

Query: 116  GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNW--HSR 173
            GSRI++TTR+K+VL+       KIY V  L  EE+   F   AFK++  P+D NW   SR
Sbjct: 317  GSRIIITTRNKKVLQNAMA---KIYNVECLNDEESTRLFSLHAFKQDR-PQD-NWMGKSR 371

Query: 174  SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
               SY KGNPL L++LG +L  +   +W   L  L +     I +I   L+ S++KL   
Sbjct: 372  LATSYCKGNPLALKILGGALYGEDIHYWRSFLTGLRQPGNLGIENI---LRRSYDKLGKE 428

Query: 234  VKSIFLDIACFFEGEDK----DFVASILDDSESDVLDILIDKSLV----SISGNFLNMHD 285
             K IF+D+AC   G  +    D++A++   S   V D LIDKSL+    S + + + +HD
Sbjct: 429  EKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVRVKD-LIDKSLLTCVSSKNEDKIEVHD 487

Query: 286  ILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLK------------------------- 320
            +L+EM   IV++E +   GKRSRL DP ++ ++L                          
Sbjct: 488  LLKEMAWNIVKEEPKL--GKRSRLVDPDDVHKLLSTSEVKNWSTSIVNLFKGIVMVIPRR 545

Query: 321  --------HNKGTDAIE------GIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKF-Y 365
                    H KG D +E      GI LDLS  K + L   AF  M++L   KF  P+  Y
Sbjct: 546  KRRKVTDMHEKGYDPLEEHRTTEGICLDLSGTKEMCLKANAFEGMNSLTFLKFESPEIKY 605

Query: 366  EIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLR 425
                L ++ T+  L Y       GL+ LP+ LR+L WD YP ++LP+ F P++LV L +R
Sbjct: 606  PHYPLKNVKTKIHLPYY------GLNSLPEGLRWLQWDGYPSKSLPAKFYPQHLVHLIIR 659

Query: 426  CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLI 485
             S + + WEG                                   V  + ++  YC NLI
Sbjct: 660  GSPIRRCWEGY-----------------------------DQPQLVNLIVLDLRYCANLI 690

Query: 486  EFPQISGKVTRLYLGQS---AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS-L 541
              P IS  +    L      ++ EVP  ++ LT L  LD+  CK LKR+     KL S L
Sbjct: 691  AIPDISSSLNLEELLLCRCVSLVEVPFHVQYLTKLVTLDINYCKNLKRLPP---KLDSKL 747

Query: 542  VTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDN 601
            +  + +  L +   PEI  +   L+      T + ELPS+  N+    VL +     +  
Sbjct: 748  LKHVRMKNLEVTCCPEIDSR--ELEEFDLSGTSLGELPSAIYNVKQNGVLRLHG-KNITK 804

Query: 602  LPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMG 661
             P     L+     L+  S        + L++  +   +S    L  F    L G   + 
Sbjct: 805  FPGITTILKRFKLSLSGTSI-----REIDLADYHQQHQTSDGLLLPKFHNLSLTGNRQLE 859

Query: 662  LLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP 721
            +L          P  I  + S E+   S    ESLP I + MS L  +H+     L S+P
Sbjct: 860  VL----------PNSIWNMISEELFICSSPLIESLPEISEPMSTLTSLHVFCCRSLTSIP 909

Query: 722  ELPLCLKYLHLIDCKMLQSLPVLPFCLE------SLDLTGCNMLRSLPELPLCLQ---YL 772
                 L+ L  + C +   +  LP  ++      S+DL  C  L S+P     L     L
Sbjct: 910  TSISNLRSLISL-CLVETGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTL 968

Query: 773  NLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWA 832
            ++  C ++ SLPELP  L+ L V  C  LQ+LP     L  L+                 
Sbjct: 969  SMSGCEIIISLPELPPNLKTLNVSGCKSLQALPSNTCKLLYLNT---------------- 1012

Query: 833  PESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRG 892
                        F  C +L+     + +A+ L+       ASL   YE  +         
Sbjct: 1013 ----------IHFDGCPQLDQAIPGEFVANFLVH------ASLSPSYERQVR-------- 1048

Query: 893  SLIVLPGSEIPDWFSNQS----SGSSICIQLP 920
                  GSE+P WFS +S      S++ ++LP
Sbjct: 1049 ----CSGSELPKWFSYRSMEDEDCSTVKVELP 1076


>gi|5823585|emb|CAB53784.1| disease resistance protein rps4-RLD [Arabidopsis thaliana]
          Length = 1217

 Score =  274 bits (700), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 213/713 (29%), Positives = 344/713 (48%), Gaps = 98/713 (13%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           D     +I+G+ GM GIGKTTL K ++  +  +F     +  +R  S+      HL+   
Sbjct: 224 DKYKGTRIIGVVGMPGIGKTTLLKELYKTWQGKFSRHALIDQIRVKSK------HLELDR 277

Query: 62  LSTTLSEKLEVAGPNIPHFTK-----ERVRRMKLLIVLDDVN---EVGQLKRLIGELDQF 113
           L   L    E++  N PH         ++   K+L+VLDDV+   ++  L+ ++  + + 
Sbjct: 278 LPQMLLG--ELSKLNNPHVDNLKDPYSQLHERKVLVVLDDVSKREQIDALREILDWIKEG 335

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAF---KENHCPEDLNW 170
            +GSR+V+ T D  +     G     Y V  L   ++ + F   AF   + N   +D   
Sbjct: 336 KEGSRVVIATSDMSLT---NGLVDDTYMVQNLNHRDSLQLFHYHAFIDDQANPQKKDFMK 392

Query: 171 HSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
            S   V Y +G+PL L+VLG  L  K   HW      + ++ +S   +I  + ++S+++L
Sbjct: 393 LSEGFVHYARGHPLALKVLGGELNKKSMDHWNS---KMKKLAQSPSPNIVSVFQVSYDEL 449

Query: 231 TPRVKSIFLDIACFFEGEDKDFVASILDDSE------SDVLDILIDKSLVSISGNFLNMH 284
           T   K  FLDIACF   +DKD+V S+L  S+         +  L DK L++     + MH
Sbjct: 450 TTAQKDAFLDIACF-RSQDKDYVESLLASSDLGSAEAMSAVKSLTDKFLINTCDGRVEMH 508

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISR-----VLKHNKGTDAIEGIFLDLSKIK 339
           D+L +  R++  + S ++  ++ RLW  + I +     VL++      + GIFLDLS+++
Sbjct: 509 DLLYKFSREVDLKASNQDGSRQRRLWLHQHIIKGGIINVLQNKMKAANVRGIFLDLSEVE 568

Query: 340 G-INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLR 398
              +LD   F NM NLR  KFY           S   +E  + +K+ +P+ L    K++R
Sbjct: 569 DETSLDRDHFINMGNLRYLKFY----------NSHCPQECKTNNKINIPDKLKLPLKEVR 618

Query: 399 YLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK--------------------- 437
            LHW  +PL TLP++F P NLV+L L  S++EQ WEG+K                     
Sbjct: 619 CLHWLKFPLETLPNDFNPINLVDLKLPYSEMEQLWEGDKDTPCLRWVDLNHSSKLCSLSG 678

Query: 438 -------------ACV-----PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
                         C      P  ++  K L+ L+ KGC SL S P  ++ +   T+  S
Sbjct: 679 LSKAEKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPE-MNLISLKTLTLS 737

Query: 480 YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
            C    EFP IS  +  LYL  +AI ++P ++E L  L VL+++ CK L+ I     +L+
Sbjct: 738 GCSTFKEFPLISDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELK 797

Query: 540 SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
           +L  LIL  CLNL+ FPEI   +  L  +  D T I  +P     LP ++ L +   +K+
Sbjct: 798 ALQELILSDCLNLKIFPEI--DISFLNILLLDGTAIEVMP----QLPSVQYLCLSRNAKI 851

Query: 600 DNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
             LP  I  L  L ++ L   ++++ +P        L+ LD+  C  L++  +
Sbjct: 852 SCLPVGISQLSQLKWLDLKYCTSLTSVPE---FPPNLQCLDAHGCSSLKTVSK 901



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 190/456 (41%), Gaps = 74/456 (16%)

Query: 616  LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
            L   + +   P  +    ML  L+   C  LES P   L+ L  + L   S +  +E P 
Sbjct: 690  LEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEMNLISLKTLTLSGCSTF--KEFP- 746

Query: 676  EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH---L 732
                  ++E LYL G     LP  ++++ +L  ++++D  ML+ +P     LK L    L
Sbjct: 747  --LISDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELIL 804

Query: 733  IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP----LCL------------------- 769
             DC  L+  P +     ++ L     +  +P+LP    LCL                   
Sbjct: 805  SDCLNLKIFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQLSQL 864

Query: 770  QYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDL 829
            ++L+L+ C  L S+PE P  LQ L    C+ L+++ + L       A ++     HS   
Sbjct: 865  KWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPL-------ARIMPTEQNHS--- 914

Query: 830  QWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSE 889
                         F FTNC  L   A  +I + +  + + ++ A  R    +      S 
Sbjct: 915  ------------TFIFTNCENLEQAAKEEITSYAQRKCQLLSYARKRHNGGLVSESLFS- 961

Query: 890  LRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRY 949
                    PG E+P WF +++ GS + ++L PH   + L G A CAV+          R 
Sbjct: 962  -----TCFPGCEVPSWFCHETVGSELEVKLLPHWHDKKLAGIALCAVVSCLDPQDQVSR- 1015

Query: 950  FYVSFQFDLEIKTLSETKHV-DLGYNSRY--IEDLIDSDRVILGFKPCLNV------GFP 1000
              V+  F ++ +  S   +   +G  +R+   +D I+ D V +G+  C +       G  
Sbjct: 1016 LSVTCTFKVKDEDKSWVPYTCPVGSWTRHGGGKDKIELDHVFIGYTSCPHTIKCHEEGNS 1075

Query: 1001 DGYHHTIATFKF-----FAERKFYKIKRCGLCPVYA 1031
            D  + T A+ KF      +E   YK+ +CGL  VYA
Sbjct: 1076 DECNPTEASLKFTVTGGTSENGKYKVLKCGLSLVYA 1111


>gi|297740948|emb|CBI31260.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  274 bits (700), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 204/613 (33%), Positives = 306/613 (49%), Gaps = 112/613 (18%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG-GLEHLQKQMLSTTLSEKLEVAGPNIP 78
           KTT+AKAI+++ S+ F+ + F+++V  NS      L   Q+ +   ++            
Sbjct: 223 KTTIAKAIYNKISYHFQSTIFLTNVGENSRGHHLNLPQFQQLLDDASIG----------- 271

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
             T  R +  ++L+V+DDV+ + Q++ L+   D F   SRI+ TTRD+ +L   + +   
Sbjct: 272 --TYGRTKNKRVLLVVDDVDRLSQVEYLVKLRDSFSLRSRIIFTTRDRHLLNVAKLDAS- 328

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            Y   GL  EEA   F   AFK+    ED       VV Y KG+PL L+VLGSSL  K  
Sbjct: 329 -YESKGLTHEEAIHLFSWHAFKQTFPKEDYVGLVNHVVGYVKGHPLALKVLGSSLFGKTI 387

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
           + W  +LH L +    EI   Y+ LK+SF+ LTP  + IFL + C  +G+D++ V++ILD
Sbjct: 388 TEWKCILHKLRKNTHGEI---YNELKVSFDGLTPTEQEIFLKVVCLLKGKDEESVSTILD 444

Query: 259 D----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
                SES +  +L D  L +IS N L MHD+LQ+MG++++ + +  EP KRSRL D K+
Sbjct: 445 SLGLGSESGI-QVLHDMCLATISNNKLYMHDLLQQMGQKLIDENNPHEPSKRSRLQDSKD 503

Query: 315 ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP--- 371
           +   L  N GT+ I+ I                F++   L++ K Y      ++ LP   
Sbjct: 504 VYPRLTRNTGTEEIQKI---------------QFSSAGFLKMPKLYSLMHLPLKSLPPNF 548

Query: 372 ----------SMSTEEQL---SYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
                     S S   QL    Y ++    G + + K L  +H    PL++LP NF   +
Sbjct: 549 PGDSLIFLDWSRSNIRQLWKDEYPRLTRNTGTEAIQKLLSPMH---LPLKSLPPNFPGDS 605

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
           L+ L+L  S + Q W+G K     S+ N K                           +N 
Sbjct: 606 LILLDLSRSNIRQLWKGNK-----SLGNLK--------------------------VMNL 634

Query: 479 SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
           SYC NL++                 I + PS    +  L++L L+GCK+L+ + +S C+L
Sbjct: 635 SYCQNLVK-----------------ISKFPS----MPALKILRLKGCKKLRSLPSSICEL 673

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
           + L  L   GC NLE FPEI EKME+LK ++ D T I ELPSS  +L  LE L +E C  
Sbjct: 674 KCLECLWCSGCSNLEAFPEITEKMENLKELHLDETAIKELPSSIYHLTALEFLNLEHCKN 733

Query: 599 LDNLPDNIGSLEY 611
           L +LP    S++Y
Sbjct: 734 LVSLPS--ASIKY 744



 Score = 43.9 bits (102), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 16/137 (11%)

Query: 682 SLEILYLSGNNFESLPAIIKQMSQLRFIHL---EDFNMLQSLPELPLCLKYLHLIDCKML 738
           SL +L LS +N   L    K +  L+ ++L   ++   +   P +P  LK L L  CK L
Sbjct: 605 SLILLDLSRSNIRQLWKGNKSLGNLKVMNLSYCQNLVKISKFPSMP-ALKILRLKGCKKL 663

Query: 739 QSLPVLPF---CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRS-LPELP------L 788
           +SLP       CLE L  +GC+ L + PE+   ++  NL++ ++  + + ELP       
Sbjct: 664 RSLPSSICELKCLECLWCSGCSNLEAFPEITEKME--NLKELHLDETAIKELPSSIYHLT 721

Query: 789 CLQLLTVRNCNRLQSLP 805
            L+ L + +C  L SLP
Sbjct: 722 ALEFLNLEHCKNLVSLP 738


>gi|5823587|emb|CAB53785.1| disease resistance protein RPS4-Ler [Arabidopsis thaliana]
          Length = 1217

 Score =  274 bits (700), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 213/713 (29%), Positives = 343/713 (48%), Gaps = 98/713 (13%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           D     +I+G+ GM GIGKTTL K ++  +  +F     +  +R  S+      HL+   
Sbjct: 224 DKYKGTRIIGVVGMPGIGKTTLLKELYKTWQGKFSRHALIDQIRVKSK------HLELDR 277

Query: 62  LSTTLSEKLEVAGPNIPHFTK-----ERVRRMKLLIVLDDVN---EVGQLKRLIGELDQF 113
           L   L    E++  N PH         ++   K+L+VLDDV+   ++  L+ ++  + + 
Sbjct: 278 LPQMLLG--ELSKLNNPHVDNLKDPYSQLHERKVLVVLDDVSKREQIDALREILDWIKEG 335

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAF---KENHCPEDLNW 170
            +GSR+V+ T D  +     G     Y V  L   ++ + F   AF   + N   +D   
Sbjct: 336 KEGSRVVIATSDMSLT---NGLVDDTYMVQNLNHRDSLQLFHYHAFIDDQANPQKKDFMK 392

Query: 171 HSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
            S   V Y +G+PL L+VLG  L  K   HW      + ++ +S   +I  + ++S+++L
Sbjct: 393 LSEGFVHYARGHPLALKVLGGELNKKSMDHWNS---KMKKLAQSPSPNIVSVFQVSYDEL 449

Query: 231 TPRVKSIFLDIACFFEGEDKDFVASILDDSE------SDVLDILIDKSLVSISGNFLNMH 284
           T   K  FLDIACF   +DKD+V S+L  S+         +  L DK L++     + MH
Sbjct: 450 TTAQKDAFLDIACF-RSQDKDYVESLLASSDLGSAEAMSAVKSLTDKFLINTCDGRVEMH 508

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISR-----VLKHNKGTDAIEGIFLDLSKIK 339
           D+L +  R++  + S ++  ++ RLW  + I +     VL++      + GIFLDLS+++
Sbjct: 509 DLLYKFSREVDLKASNQDGSRQRRLWLHQHIIKGGIINVLQNKMKAANVRGIFLDLSEVE 568

Query: 340 G-INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLR 398
              +LD   F NM NLR  KFY           S   +E  + +K+ +P+ L    K++R
Sbjct: 569 DETSLDRDHFINMGNLRYLKFY----------NSHCPQECKTNNKINIPDKLKLPLKEVR 618

Query: 399 YLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK--------------------- 437
            LHW  +PL TLP++F P NLV+L L  S+ EQ WEG+K                     
Sbjct: 619 CLHWLKFPLETLPNDFNPINLVDLKLPYSETEQLWEGDKDTPCLRWVDLNHSSKLCSLSG 678

Query: 438 -------------ACV-----PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
                         C      P  ++  K L+ L+ KGC SL S P  ++ +   T+  S
Sbjct: 679 LSKAEKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPE-MNLISLKTLTLS 737

Query: 480 YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
            C    EFP IS  +  LYL  +AI ++P ++E L  L VL+++ CK L+ I     +L+
Sbjct: 738 GCSTFKEFPLISDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELK 797

Query: 540 SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
           +L  LIL  CLNL+ FPEI   +  L  +  D T I  +P     LP ++ L +   +K+
Sbjct: 798 ALQELILSDCLNLKIFPEI--DISFLNILLLDGTAIEVMP----QLPSVQYLCLSRNAKI 851

Query: 600 DNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
             LP  I  L  L ++ L   ++++ +P        L+ LD+  C  L++  +
Sbjct: 852 SCLPVGISQLSQLKWLDLKYCTSLTSVPE---FPPNLQCLDAHGCSSLKTVSK 901



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 190/456 (41%), Gaps = 74/456 (16%)

Query: 616  LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
            L   + +   P  +    ML  L+   C  LES P   L+ L  + L   S +  +E P 
Sbjct: 690  LEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEMNLISLKTLTLSGCSTF--KEFP- 746

Query: 676  EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH---L 732
                  ++E LYL G     LP  ++++ +L  ++++D  ML+ +P     LK L    L
Sbjct: 747  --LISDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELIL 804

Query: 733  IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP----LCL------------------- 769
             DC  L+  P +     ++ L     +  +P+LP    LCL                   
Sbjct: 805  SDCLNLKIFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQLSQL 864

Query: 770  QYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDL 829
            ++L+L+ C  L S+PE P  LQ L    C+ L+++ + L       A ++     HS   
Sbjct: 865  KWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPL-------ARIMPTEQNHS--- 914

Query: 830  QWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSE 889
                         F FTNC  L   A  +I + +  + + ++ A  R    +      S 
Sbjct: 915  ------------TFIFTNCENLEQAAKEEITSYAQRKCQLLSYARKRYNGGLVSESLFS- 961

Query: 890  LRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRY 949
                    PG E+P WF +++ GS + ++L PH   + L G A CAV+          R 
Sbjct: 962  -----TCFPGCEVPSWFCHETVGSELEVKLLPHWHDKKLAGIALCAVISCLDPQDQVSR- 1015

Query: 950  FYVSFQFDLEIKTLSETKHV-DLGYNSRY--IEDLIDSDRVILGFKPCLNV------GFP 1000
              V+  F ++ +  S   +   +G  +R+   +D I+ D V +G+  C +       G  
Sbjct: 1016 LSVTCTFKVKDEDKSWVPYTCPVGSWTRHGGGKDKIELDHVFIGYTSCPHTIKCHEEGNS 1075

Query: 1001 DGYHHTIATFKF-----FAERKFYKIKRCGLCPVYA 1031
            D  + T A+ KF      +E   YK+ +CGL  VYA
Sbjct: 1076 DECNPTEASLKFTVTGGTSENGKYKVFKCGLSLVYA 1111


>gi|297826151|ref|XP_002880958.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297326797|gb|EFH57217.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 986

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 219/660 (33%), Positives = 328/660 (49%), Gaps = 73/660 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           SD V+++GIWG  GIGK+T+A+A+ +Q S  F+   +     G S        LQ  +LS
Sbjct: 203 SDEVKMIGIWGPAGIGKSTIARALNNQLSSSFQLKLW-----GTSREHDSKLWLQNHLLS 257

Query: 64  TTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             L+++       I H    KER+   ++LI+LDDV+++ +L+ L  E   FG GSRI+V
Sbjct: 258 KILNQE----NMKIHHLGAIKERLHDQRVLIILDDVDDLKKLEVLAEERSWFGFGSRIIV 313

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TT DK++LE      K IY V+    EEA E  C  AFK++  P+     +  V      
Sbjct: 314 TTEDKKILEAHG--IKDIYHVDFPSEEEALEILCLSAFKQSSVPDGFEEVANKVAELCGN 371

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L V+G SLC + K  W      L+ I  S    I DILK+ +++LT + +S+FL I
Sbjct: 372 LPLGLCVVGKSLCGESKQEWEL---QLSSIEASLDRGIEDILKVGYDRLTKKNQSLFLHI 428

Query: 242 ACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQ 297
           ACFF  E  D+V ++L DS  DV   L  L DKSLV  S    + MH +LQ++GRQIV +
Sbjct: 429 ACFFNYEKVDYVTTMLADSNLDVRNGLKTLADKSLVHKSTYGHIVMHHLLQQLGRQIVHE 488

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
           +S+ EPGK   L +  EI  VL    GT ++ GI  D S I  +++   AF  M NLR  
Sbjct: 489 QSD-EPGKHQFLTEADEICDVLTTETGTGSVLGISFDTSNIGEVSVGKGAFEGMRNLRFL 547

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
                                  Y  +Q+P  L      LR LHW  YP ++LP  F+P+
Sbjct: 548 TI---------------------YRSLQIPEDL-DYLPLLRLLHWKYYPRKSLPLRFQPE 585

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
            LV+L +R S +E+ W G        IQ+   L  +  K    L+  P+         + 
Sbjct: 586 RLVKLRMRHSNLEKLWGG--------IQSLPNLKIIDLKLSSELKEIPNLSKSTNLEELT 637

Query: 478 FSYCVNLIEFPQISGKVTRLYLGQ----SAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
             YC +L+E P     + +L +      S ++ +P++I  L  LE LD+ GC RL    T
Sbjct: 638 LEYCTSLVELPSSIKNLQKLKILNVDYCSMLQVIPTNIN-LASLERLDMGGCSRL----T 692

Query: 534 SFCKLRSLVTLILLGCLNLEHFPE----ILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
           +F  + S +  + LG  ++E  P      L +++HL    +    +T +P    NL    
Sbjct: 693 TFPDISSNIEFLNLGDTDIEDVPPSAAGCLSRLDHLNICSTSLKRLTHVPLFITNL---- 748

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
              V D S ++ +PD +  L  L ++  +  + ++L S   L   LR L++ +C  L+SF
Sbjct: 749 ---VLDGSDIETIPDCVICLTRLEWL--SVESCTKLESIPGLPPSLRLLEADNCVSLKSF 803



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 149/365 (40%), Gaps = 92/365 (25%)

Query: 563 EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAI 622
           E L ++    + + +L    ++LP L+++ ++  S+L  +P+   S       L   +++
Sbjct: 585 ERLVKLRMRHSNLEKLWGGIQSLPNLKIIDLKLSSELKEIPNLSKSTNLEELTLEYCTSL 644

Query: 623 SQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSS 682
            +LPSS+     L+ L+  +C  L+  P                             L+S
Sbjct: 645 VELPSSIKNLQKLKILNVDYCSMLQVIPTNI-------------------------NLAS 679

Query: 683 LEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL-HLIDCKM-LQ 739
           LE L + G +   + P I    S + F++L D ++    P    CL  L HL  C   L+
Sbjct: 680 LERLDMGGCSRLTTFPDI---SSNIEFLNLGDTDIEDVPPSAAGCLSRLDHLNICSTSLK 736

Query: 740 SLPVLPFCLESLDLTGCNMLRSLPELPLCL---QYLNLEDCNMLRSLPELPLCLQLLTVR 796
            L  +P  + +L L G + + ++P+  +CL   ++L++E C  L S+P LP  L+LL   
Sbjct: 737 RLTHVPLFITNLVLDGSD-IETIPDCVICLTRLEWLSVESCTKLESIPGLPPSLRLLEAD 795

Query: 797 NCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKAN 856
           NC  L+S                   S H+P  +              F NC KL+ +A 
Sbjct: 796 NCVSLKS------------------FSFHNPTKR------------LSFRNCFKLDEEAR 825

Query: 857 NKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSIC 916
             I+  S+                              + LPG +IP  F+++++G SI 
Sbjct: 826 RGIIQKSIY---------------------------DYVCLPGKKIPAEFTHKATGRSIT 858

Query: 917 IQLPP 921
           I L P
Sbjct: 859 IPLAP 863


>gi|10177584|dbj|BAB10815.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1160

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 255/847 (30%), Positives = 395/847 (46%), Gaps = 122/847 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV--RGNSETAGGLE------ 55
           S+ V++VGIWG  GIGKTT+A+A+F + S +F+ S F+  V    + E   G        
Sbjct: 205 SEEVRMVGIWGPSGIGKTTIARALFSRLSCQFQSSVFIDKVFISKSMEVYSGANLVDYNM 264

Query: 56  --HLQKQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQ 112
             HLQ+  L+    +K +++    +    K R    K LIV+DD+++   L  L  +   
Sbjct: 265 KLHLQRAFLAEIFDKKDIKIHVGAMEKMVKHR----KALIVIDDLDDQDVLDALADQTQW 320

Query: 113 FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
           FG GSRI+V T +K  L   R +   IY+V       A E FC  AFK+N  P+D    S
Sbjct: 321 FGSGSRIIVVTENKHFLRANRIDH--IYKVCLPSNALALEMFCRSAFKKNSPPDDFLELS 378

Query: 173 RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
             V       PL L VLGS+L    K +W  +L  L  +       I   L++S++ L  
Sbjct: 379 SEVALRAGNLPLGLNVLGSNLRGINKGYWIDMLPRLQGLDGK----IGKTLRVSYDGLNN 434

Query: 233 RV-KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQ 288
           R  ++IF  IAC F GE    +  +L +S  DV   L  L+D+SL+    N L MH +LQ
Sbjct: 435 RKDEAIFRHIACIFNGEKVSDIKLLLANSNLDVNIGLKNLVDRSLICERFNTLEMHSLLQ 494

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
           E+G++IVR +S  +PG+R  L D K+I  VL+HN GT  + GI LD+ +   +++   +F
Sbjct: 495 ELGKEIVRTQS-NQPGEREFLVDLKDICDVLEHNTGTKKVLGITLDIDETDELHIHESSF 553

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M NL   K Y  K  + +K+            +  LP   DYLP +LR L +D YP +
Sbjct: 554 KGMHNLLFLKIYTKKLDQKKKV------------RWHLPERFDYLPSRLRLLRFDRYPSK 601

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            LPSNF P+NLV+L ++ SK+E+ W+G        + +   L  +  +G ++L+  P   
Sbjct: 602 CLPSNFHPENLVKLQMQQSKLEKLWDG--------VHSLAGLRNMDLRGSRNLKEIPDLS 653

Query: 469 HFVCPVTINFSYCVNLIEFP---QISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRG 524
                 T+  S C +L+E P   Q   K+  L +     +E +PS +  L  L+ L+L G
Sbjct: 654 MATNLETLKLSSCSSLVELPSSIQYLNKLNDLDMSYCDHLETIPSGVN-LKSLDRLNLSG 712

Query: 525 CKRLKR---ISTSFCKLRSLVTLILLGCLNLEHFPEIL--EKME-----------HLKRI 568
           C RLK    I T+   L    T  +   L L++  E++  E+++            L R+
Sbjct: 713 CSRLKSFLDIPTNISWLDIGQTADIPSNLRLQNLDELILCERVQLRTPLMTMLSPTLTRL 772

Query: 569 -YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPS 627
            +S+     E+PSS +NL  LE L + +C  L                         LP+
Sbjct: 773 TFSNNPSFVEVPSSIQNLYQLEHLEIMNCRNL-----------------------VTLPT 809

Query: 628 SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
            + L +++ SLD SHC  L++FP       + +  L++S  A+ E+P  I  LS L   Y
Sbjct: 810 GINLDSLI-SLDLSHCSQLKTFPDIS----TNISDLNLSYTAIEEVPLSIEKLSLL--CY 862

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC 747
           L  N   +L  +   +S+L+ +   DF+    L E        +    +M++ LP   F 
Sbjct: 863 LDMNGCSNLLCVSPNISKLKHLERADFSDCVELTEAS-----WNGSSSEMVKLLPADNFS 917

Query: 748 LESLDLTGC----------------NMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQ 791
              L+   C                 ++ +  E+P    Y          SLP + +C  
Sbjct: 918 TVKLNFINCFKLDLTALIQNQTFFMQLILTGEEVP---SYFTHRTSGDSISLPHISVCQS 974

Query: 792 LLTVRNC 798
             + R C
Sbjct: 975 FFSFRGC 981



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 130/539 (24%), Positives = 232/539 (43%), Gaps = 106/539 (19%)

Query: 554  HFPEILEKM-EHLKRIYSDRTPITELPSSF--ENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
            H PE  + +   L+ +  DR P   LPS+F  ENL  L++      SKL+ L D + SL 
Sbjct: 578  HLPERFDYLPSRLRLLRFDRYPSKCLPSNFHPENLVKLQM----QQSKLEKLWDGVHSLA 633

Query: 611  YLYYI------------------------LAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
             L  +                        L++ S++ +LPSS+   N L  LD S+C  L
Sbjct: 634  GLRNMDLRGSRNLKEIPDLSMATNLETLKLSSCSSLVELPSSIQYLNKLNDLDMSYCDHL 693

Query: 647  ESFPRTFLLGLSAMGLLHISD----YAVREIPQEIAYLSSLEILYLSGN-NFESLPAII- 700
            E+ P    + L ++  L++S      +  +IP  I++L   +   +  N   ++L  +I 
Sbjct: 694  ETIPSG--VNLKSLDRLNLSGCSRLKSFLDIPTNISWLDIGQTADIPSNLRLQNLDELIL 751

Query: 701  ---------------KQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP--V 743
                             +++L F +   F  + S  +    L++L +++C+ L +LP  +
Sbjct: 752  CERVQLRTPLMTMLSPTLTRLTFSNNPSFVEVPSSIQNLYQLEHLEIMNCRNLVTLPTGI 811

Query: 744  LPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQS 803
                L SLDL+ C+ L++ P++   +  LNL       ++ E+PL ++ L+         
Sbjct: 812  NLDSLISLDLSHCSQLKTFPDISTNISDLNLS----YTAIEEVPLSIEKLS--------- 858

Query: 804  LPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKL-----NGKANNK 858
                LLC   LD +    L   SP++    + L+ A    +F++C++L     NG ++  
Sbjct: 859  ----LLCY--LDMNGCSNLLCVSPNIS-KLKHLERA----DFSDCVELTEASWNGSSSEM 907

Query: 859  IL---ADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSI 915
            +    AD+   ++   I   +L     I  +   ++   ++L G E+P +F++++SG S 
Sbjct: 908  VKLLPADNFSTVKLNFINCFKLDLTALIQNQTFFMQ---LILTGEEVPSYFTHRTSGDS- 963

Query: 916  CIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSE-TKHVD-LGY 973
             I LP  S C++   F  C V     +D D F    VSF  ++  + +     H D   +
Sbjct: 964  -ISLPHISVCQSFFSFRGCTV-----IDVDSFSTISVSFDIEVCCRFIDRFGNHFDSTDF 1017

Query: 974  NSRYIEDLIDSDRVILGFKPCLN---VGFPDG---YHHTIATFKFFAERKFYKIKRCGL 1026
               +I   +    V+       N     F DG   Y H    F+   +    K+K CG+
Sbjct: 1018 PGYFITTKLGGHLVVFDCYFPFNEEFTTFLDGQFNYDHVDIQFRLTNDNSQLKLKGCGI 1076


>gi|42568353|ref|NP_199459.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008006|gb|AED95389.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1127

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 255/847 (30%), Positives = 395/847 (46%), Gaps = 122/847 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV--RGNSETAGGLE------ 55
           S+ V++VGIWG  GIGKTT+A+A+F + S +F+ S F+  V    + E   G        
Sbjct: 205 SEEVRMVGIWGPSGIGKTTIARALFSRLSCQFQSSVFIDKVFISKSMEVYSGANLVDYNM 264

Query: 56  --HLQKQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQ 112
             HLQ+  L+    +K +++    +    K R    K LIV+DD+++   L  L  +   
Sbjct: 265 KLHLQRAFLAEIFDKKDIKIHVGAMEKMVKHR----KALIVIDDLDDQDVLDALADQTQW 320

Query: 113 FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
           FG GSRI+V T +K  L   R +   IY+V       A E FC  AFK+N  P+D    S
Sbjct: 321 FGSGSRIIVVTENKHFLRANRIDH--IYKVCLPSNALALEMFCRSAFKKNSPPDDFLELS 378

Query: 173 RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
             V       PL L VLGS+L    K +W  +L  L  +       I   L++S++ L  
Sbjct: 379 SEVALRAGNLPLGLNVLGSNLRGINKGYWIDMLPRLQGLDGK----IGKTLRVSYDGLNN 434

Query: 233 RV-KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQ 288
           R  ++IF  IAC F GE    +  +L +S  DV   L  L+D+SL+    N L MH +LQ
Sbjct: 435 RKDEAIFRHIACIFNGEKVSDIKLLLANSNLDVNIGLKNLVDRSLICERFNTLEMHSLLQ 494

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
           E+G++IVR +S  +PG+R  L D K+I  VL+HN GT  + GI LD+ +   +++   +F
Sbjct: 495 ELGKEIVRTQS-NQPGEREFLVDLKDICDVLEHNTGTKKVLGITLDIDETDELHIHESSF 553

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M NL   K Y  K  + +K+            +  LP   DYLP +LR L +D YP +
Sbjct: 554 KGMHNLLFLKIYTKKLDQKKKV------------RWHLPERFDYLPSRLRLLRFDRYPSK 601

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            LPSNF P+NLV+L ++ SK+E+ W+G        + +   L  +  +G ++L+  P   
Sbjct: 602 CLPSNFHPENLVKLQMQQSKLEKLWDG--------VHSLAGLRNMDLRGSRNLKEIPDLS 653

Query: 469 HFVCPVTINFSYCVNLIEFP---QISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRG 524
                 T+  S C +L+E P   Q   K+  L +     +E +PS +  L  L+ L+L G
Sbjct: 654 MATNLETLKLSSCSSLVELPSSIQYLNKLNDLDMSYCDHLETIPSGVN-LKSLDRLNLSG 712

Query: 525 CKRLKR---ISTSFCKLRSLVTLILLGCLNLEHFPEIL--EKME-----------HLKRI 568
           C RLK    I T+   L    T  +   L L++  E++  E+++            L R+
Sbjct: 713 CSRLKSFLDIPTNISWLDIGQTADIPSNLRLQNLDELILCERVQLRTPLMTMLSPTLTRL 772

Query: 569 -YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPS 627
            +S+     E+PSS +NL  LE L + +C  L                         LP+
Sbjct: 773 TFSNNPSFVEVPSSIQNLYQLEHLEIMNCRNL-----------------------VTLPT 809

Query: 628 SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
            + L +++ SLD SHC  L++FP       + +  L++S  A+ E+P  I  LS L   Y
Sbjct: 810 GINLDSLI-SLDLSHCSQLKTFPDIS----TNISDLNLSYTAIEEVPLSIEKLSLL--CY 862

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC 747
           L  N   +L  +   +S+L+ +   DF+    L E        +    +M++ LP   F 
Sbjct: 863 LDMNGCSNLLCVSPNISKLKHLERADFSDCVELTEAS-----WNGSSSEMVKLLPADNFS 917

Query: 748 LESLDLTGC----------------NMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQ 791
              L+   C                 ++ +  E+P    Y          SLP + +C  
Sbjct: 918 TVKLNFINCFKLDLTALIQNQTFFMQLILTGEEVP---SYFTHRTSGDSISLPHISVCQS 974

Query: 792 LLTVRNC 798
             + R C
Sbjct: 975 FFSFRGC 981



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 130/539 (24%), Positives = 232/539 (43%), Gaps = 106/539 (19%)

Query: 554  HFPEILEKM-EHLKRIYSDRTPITELPSSF--ENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
            H PE  + +   L+ +  DR P   LPS+F  ENL  L++      SKL+ L D + SL 
Sbjct: 578  HLPERFDYLPSRLRLLRFDRYPSKCLPSNFHPENLVKLQM----QQSKLEKLWDGVHSLA 633

Query: 611  YLYYI------------------------LAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
             L  +                        L++ S++ +LPSS+   N L  LD S+C  L
Sbjct: 634  GLRNMDLRGSRNLKEIPDLSMATNLETLKLSSCSSLVELPSSIQYLNKLNDLDMSYCDHL 693

Query: 647  ESFPRTFLLGLSAMGLLHISD----YAVREIPQEIAYLSSLEILYLSGN-NFESLPAII- 700
            E+ P    + L ++  L++S      +  +IP  I++L   +   +  N   ++L  +I 
Sbjct: 694  ETIPSG--VNLKSLDRLNLSGCSRLKSFLDIPTNISWLDIGQTADIPSNLRLQNLDELIL 751

Query: 701  ---------------KQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP--V 743
                             +++L F +   F  + S  +    L++L +++C+ L +LP  +
Sbjct: 752  CERVQLRTPLMTMLSPTLTRLTFSNNPSFVEVPSSIQNLYQLEHLEIMNCRNLVTLPTGI 811

Query: 744  LPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQS 803
                L SLDL+ C+ L++ P++   +  LNL       ++ E+PL ++ L+         
Sbjct: 812  NLDSLISLDLSHCSQLKTFPDISTNISDLNLS----YTAIEEVPLSIEKLS--------- 858

Query: 804  LPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKL-----NGKANNK 858
                LLC   LD +    L   SP++    + L+ A    +F++C++L     NG ++  
Sbjct: 859  ----LLCY--LDMNGCSNLLCVSPNIS-KLKHLERA----DFSDCVELTEASWNGSSSEM 907

Query: 859  IL---ADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSI 915
            +    AD+   ++   I   +L     I  +   ++   ++L G E+P +F++++SG S 
Sbjct: 908  VKLLPADNFSTVKLNFINCFKLDLTALIQNQTFFMQ---LILTGEEVPSYFTHRTSGDS- 963

Query: 916  CIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSE-TKHVD-LGY 973
             I LP  S C++   F  C V     +D D F    VSF  ++  + +     H D   +
Sbjct: 964  -ISLPHISVCQSFFSFRGCTV-----IDVDSFSTISVSFDIEVCCRFIDRFGNHFDSTDF 1017

Query: 974  NSRYIEDLIDSDRVILGFKPCLN---VGFPDG---YHHTIATFKFFAERKFYKIKRCGL 1026
               +I   +    V+       N     F DG   Y H    F+   +    K+K CG+
Sbjct: 1018 PGYFITTKLGGHLVVFDCYFPFNEEFTTFLDGQFNYDHVDIQFRLTNDNSQLKLKGCGI 1076


>gi|13517472|gb|AAK28808.1|AF310961_1 resistance-like protein P3-A [Linum usitatissimum]
          Length = 1110

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 291/992 (29%), Positives = 437/992 (44%), Gaps = 187/992 (18%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEG--SCFVSDVRGNSETAGGLEHLQ 58
            MD  D   I+G+W MGG+GKTTLA+A +D+ +   +G    FV +V    E   G+E + 
Sbjct: 198  MDKLDDTCIIGLWEMGGVGKTTLAEACYDRVTSSNKGIKHLFVRNVNEICEKHHGVEKIV 257

Query: 59   KQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLK-RLIGELDQ-FGQ 115
             ++ S  L E  ++    NI  + +ER+ R ++ +VLD+V  + QL    +  L + F  
Sbjct: 258  HKLYSKLLDENNIDREDLNI-GYRRERLSRSRVFVVLDNVETLEQLALGYVFNLSKVFAA 316

Query: 116  GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNW--HSR 173
            GSRI++TTR+K+VL+       KIY V  L  EE+   F   AFK++  P+D NW   SR
Sbjct: 317  GSRIIITTRNKKVLQNAMA---KIYNVECLNDEESTRLFSLHAFKQDR-PQD-NWMGKSR 371

Query: 174  SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
               SY KGNPL L++LG +L  +   +W   L  L +     I +I   L+ S++KL   
Sbjct: 372  LATSYCKGNPLALKILGGALYGEDIHYWRSFLTGLRQPGNLGIENI---LRRSYDKLGKE 428

Query: 234  VKSIFLDIACFFEGEDK----DFVASILDDSESDVLDILIDKSLV----SISGNFLNMHD 285
             K IF+D+AC   G  +    D++A++   S   V D LIDKSL+    S + + + +HD
Sbjct: 429  EKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVRVKD-LIDKSLLTCVSSKNEDKIEVHD 487

Query: 286  ILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLK------------------------- 320
            +L+EM   IV++E +   GKRSRL DP ++ ++L                          
Sbjct: 488  LLKEMAWNIVKEEPKL--GKRSRLVDPDDVHKLLSTSEVKNWSTSIVNLFKGIVMVIPRR 545

Query: 321  --------HNKGTDAIE------GIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKF-Y 365
                    H KG D +E      GI LDLS  K + L   AF  M++L   KF  P+  Y
Sbjct: 546  KRRKVTDMHEKGYDPLEEHRTTEGICLDLSGTKEMCLKANAFEGMNSLTFLKFESPEIKY 605

Query: 366  EIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLR 425
                L ++ T+  L Y       GL+ LP+ LR+L WD YP ++LP+ F P++LV L +R
Sbjct: 606  PHYPLKNVKTKIHLPYY------GLNSLPEGLRWLQWDGYPSKSLPAKFYPQHLVHLIIR 659

Query: 426  CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLI 485
             S + + WEG                                   V  + ++  YC NLI
Sbjct: 660  GSPIRRCWEGY-----------------------------DQPQLVNLIVLDLRYCANLI 690

Query: 486  EFPQISGKVTRLYLGQS---AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS-L 541
              P IS  +    L      ++ EVP  ++ LT L  LD+  CK LKR+     KL S L
Sbjct: 691  AIPDISSSLNLEELLLCRCVSLVEVPFHVQYLTKLVTLDINYCKNLKRLPP---KLDSKL 747

Query: 542  VTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDN 601
            +  + +  L +   PEI  +   L+      T + ELPS+  N+    VL +        
Sbjct: 748  LKHVRMKNLEVTCCPEIDSR--ELEEFDLSGTSLGELPSAIYNVKQNGVLRLHG------ 799

Query: 602  LPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMG 661
               NI     +  IL            + L++  +   +S    L  F    L G   + 
Sbjct: 800  --KNITKFPGITTILKRFKLSGTSIREIDLADYHQQHQTSDGLLLPKFHNLSLTGNRQLE 857

Query: 662  LLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP 721
            +L          P  I  + S E+   S    ESLP I + MS L  +H+     L S+P
Sbjct: 858  VL----------PNSIWNMISEELFICSSPLIESLPEISEPMSTLTSLHVFCCRSLTSIP 907

Query: 722  ELPLCLKYLHLIDCKMLQSLPVLPFCLE------SLDLTGCNMLRSLPELPLCLQ---YL 772
                 L+ L  + C +   +  LP  ++      S+DL  C  L S+P     L     L
Sbjct: 908  TSISNLRSLISL-CLVETGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTL 966

Query: 773  NLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWA 832
            ++  C ++ SLPELP  L+ L V  C  LQ+LP     L  L+                 
Sbjct: 967  SMSGCEIIISLPELPPNLKTLNVSGCKSLQALPSNTCKLLYLNT---------------- 1010

Query: 833  PESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRG 892
                        F  C +L+     + +A+ L+       ASL   YE  +         
Sbjct: 1011 ----------IHFDGCPQLDQAIPGEFVANFLVH------ASLSPSYERQVR-------- 1046

Query: 893  SLIVLPGSEIPDWFSNQS----SGSSICIQLP 920
                  GSE+P WFS +S      S++ ++LP
Sbjct: 1047 ----CSGSELPKWFSYRSMEDEDCSTVKVELP 1074


>gi|332330346|gb|AEE43932.1| TIR-NBS-LRR resistance protein muRdr1H [Rosa multiflora]
          Length = 1122

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 223/683 (32%), Positives = 339/683 (49%), Gaps = 104/683 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK----LEVAGP 75
           KTTLA+ ++ + SH+FE   F+ +VR  S+T  GL  LQK++LS    E+    L+V   
Sbjct: 230 KTTLARLVYQKISHQFEVCIFLDNVREVSKTTHGLVDLQKKILSQIFKEENVQVLDVYSG 289

Query: 76  NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGE 135
                 K  V    +L+VLDD+++  QL+ L+GE D FG  SRI++TTRD+ VL    G 
Sbjct: 290 MT--MIKRCVCNKAVLLVLDDMDQSEQLENLVGEKDCFGLRSRIIITTRDRHVLVT-HGV 346

Query: 136 EKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
           EK  Y +NGL   EA + F   AF++    ED     +S V+Y  G PL L++LGS L  
Sbjct: 347 EKP-YELNGLNKNEALQLFSWKAFRKCEPEEDFAELCKSFVTYAGGLPLALKILGSFLKG 405

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           +    W   L  L +  +     ++ ILK+SF+ L    K IFLDIACF     K+F+  
Sbjct: 406 RTPDEWNSALAKLQQTPDI---TVFKILKMSFDGLDEMEKKIFLDIACFRWLYRKEFMIE 462

Query: 256 ILDDSE---SDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
           ++D S+        +L +KSL++IS  N +++HD++ EMG +IVRQE+ KEPG RSRL  
Sbjct: 463 LVDSSDPCNRITRSVLAEKSLLTISSDNQVHVHDLIHEMGCEIVRQEN-KEPGGRSRLCL 521

Query: 312 PKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
             +I  V   N GT+AIEGI LDL++++  + +  AF+ M  L+L   +           
Sbjct: 522 RDDIFHVFTKNTGTEAIEGILLDLAELEEADWNLEAFSKMCKLKLLYIH----------- 570

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
                       ++L  G   LP  LR+L W  YP ++LP  F+P  L E++L  S ++ 
Sbjct: 571 -----------NLRLSVGPRLLPNSLRFLSWSWYPSKSLPPCFQPDELAEISLVHSNIDH 619

Query: 432 PWEGEKACV----------------------PS-----------------SIQNFKYLSA 452
            W G K  V                      P+                 SI   K L  
Sbjct: 620 LWNGIKYLVNLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCTNLVKIHPSIALLKRLRI 679

Query: 453 LSFKGCQSLRSFPSNLHFVCPVTINFSYCVNL---IEFPQISGKVTRLYLGQSAIEEVPS 509
            + + C+S+RS PS ++     T + S C  L    EF     ++++LYLG +A+E++PS
Sbjct: 680 WNLRNCKSIRSLPSEVNMEFLETFDVSGCSKLKMISEFVMQMKRLSKLYLGGTAVEKLPS 739

Query: 510 SIECLTD-LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI 568
           SIE L++ L VLDL G    ++  +   K   + +   L       FP    K  H    
Sbjct: 740 SIEHLSESLVVLDLSGIVIREQPYSRLLKQNLIASSFGL-------FP---RKSPH---- 785

Query: 569 YSDRTPITELPSSFENLPGLEVLFVEDCSKLDN-LPDNIGSLEYLYYILAAASAISQLPS 627
                P+  L +S ++   L  L + DC+  +  +P++IGSL  L  +    +    LP+
Sbjct: 786 -----PLIPLLASLKHFSCLRTLKLNDCNLCEGEIPNDIGSLSSLQRLELRGNNFVSLPA 840

Query: 628 SVALSNMLRSLDSSHCKGLESFP 650
           S+   ++L  +D  +CK L+  P
Sbjct: 841 SI---HLLEDVDVENCKRLQQLP 860



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 206/510 (40%), Gaps = 81/510 (15%)

Query: 551  NLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
            N++H    ++ + +LK I  S    +T  P  F  +P LE L +E C+ L  +  +I  L
Sbjct: 616  NIDHLWNGIKYLVNLKSIDLSYSINLTRTPD-FTGIPNLEKLVLEGCTNLVKIHPSIALL 674

Query: 610  EYL-YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY 668
            + L  + L    +I  LPS V +   L + D S C  L+     F++ +  +  L++   
Sbjct: 675  KRLRIWNLRNCKSIRSLPSEVNME-FLETFDVSGCSKLKMISE-FVMQMKRLSKLYLGGT 732

Query: 669  AVREIPQEIAYLS-SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCL 727
            AV ++P  I +LS SL +L LSG      P        L       F      P +PL  
Sbjct: 733  AVEKLPSSIEHLSESLVVLDLSGIVIREQPYSRLLKQNLIASSFGLFPRKSPHPLIPLLA 792

Query: 728  KYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP------LCLQYLNLEDCNMLR 781
               H               CL +L L  CN+     E+P        LQ L L   N + 
Sbjct: 793  SLKHFS-------------CLRTLKLNDCNLCEG--EIPNDIGSLSSLQRLELRGNNFV- 836

Query: 782  SLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLK-SAA 840
            SLP     L+ + V NC RLQ LPE+                   PDL   P   +  A 
Sbjct: 837  SLPASIHLLEDVDVENCKRLQQLPEL-------------------PDL---PNLCRLRAN 874

Query: 841  ICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGS 900
                  NCL + G  +      S+L+ R + I +L     M   E          V+PGS
Sbjct: 875  FWLNCINCLSMVGNQDASYFLYSVLK-RWIEIEALSRCDMMIRQETHCSFEYFRFVIPGS 933

Query: 901  EIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL----------DSKKVDSD--CFR 948
            EIP+WF+NQS G ++  +LP  +     IGFA CA++          +   +D D  C  
Sbjct: 934  EIPEWFNNQSVGDTVTEKLPWDACNSKWIGFAVCALIVPHDNPSAVPEKSHLDPDTCCIW 993

Query: 949  YFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIA 1008
             F+  +  D+            +G  +  ++ ++ SD + L   P      P+ Y     
Sbjct: 994  CFWNDYGIDV------------IGVGTNNVKQIV-SDHLYLLVLPS-PFRKPENYLEVNF 1039

Query: 1009 TFKF---FAERKFYKIKRCGLCPVYANPSE 1035
             FK        +  K+K+CG+  +Y + +E
Sbjct: 1040 VFKIARAVGSNRGMKVKKCGVRALYEHDTE 1069


>gi|297805922|ref|XP_002870845.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316681|gb|EFH47104.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 836

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 215/684 (31%), Positives = 339/684 (49%), Gaps = 117/684 (17%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG--------NSETAGGLE 55
           SD V+++GIWG  GIGKTT+A+ ++ QFS  FE S F+ +++         + E +  ++
Sbjct: 43  SDEVRMIGIWGPSGIGKTTIARVLYSQFSENFELSIFMENIKELMYTRPVCSDEYSAKIQ 102

Query: 56  HLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF 113
            LQKQ LS  ++ K       +PH    ++R+   ++LIVLD +++  QL  +  E   F
Sbjct: 103 -LQKQFLSQIINHK----DMELPHLGVAQDRLNDKRVLIVLDSIDQSIQLDAIAKETRWF 157

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP---EDLNW 170
           G GSRI++TT+D+R+L K  G    IY+V      EA++ FC +AF +N      E+L W
Sbjct: 158 GHGSRIIITTQDQRLL-KAHGI-NHIYKVEFPSAYEAYQIFCMYAFGQNFPKDGFEELAW 215

Query: 171 HSRSVVSYTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNK 229
                V+   GN PL L V+GS      +  W   L  L    ++ I  I   LK S++ 
Sbjct: 216 Q----VTKLLGNLPLGLRVMGSHFRGMSRHEWVNALPRLKIRLDASIQSI---LKFSYDA 268

Query: 230 LTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI---SGNF--L 281
           L    K +FL IAC F  E+   V   L  S  DV   L +L +KSL++I   S N   +
Sbjct: 269 LCEEDKDLFLHIACLFNDEEMVRVEDYLASSFLDVRQGLHLLAEKSLIAIEIFSTNHTRI 328

Query: 282 NMHDILQEMGRQIVRQ----ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK 337
            MH++L ++GR IVR     +S +EPGKR  L D ++I  VL  N G+  + GI  +L  
Sbjct: 329 KMHNLLVQLGRDIVRHKPGHQSIREPGKRQFLVDARDICEVLTDNTGSRNVIGILFELYN 388

Query: 338 IKG-INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKK 396
           + G +N+  RAF  +SNL+  +F+ P  Y+ E              ++ LP GL+ LP+K
Sbjct: 389 LSGELNISERAFEGLSNLKFLRFHGP--YDGEG------------KQLYLPQGLNNLPRK 434

Query: 397 LRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK------------------- 437
           LR + W  +P++ LPSNF  K LV +++  SK++  W+G +                   
Sbjct: 435 LRLIEWSCFPMKCLPSNFCTKYLVHIDMWNSKLQNMWQGNQVLGNLKRMDLWESKHLKEL 494

Query: 438 --------------------ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
                               A +PSS+ N + L  L+ +GC  L + P+N++      ++
Sbjct: 495 PDLSTATNLEKLTLFGCSSLAELPSSLGNLQKLRMLNLRGCSKLEALPTNINLESLDDLD 554

Query: 478 FSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK-------- 529
            + C+ +  FP+IS  +  L L  +AI+EVPS+I+  + L  L++     LK        
Sbjct: 555 LADCLLIKSFPEISTNIKDLMLTYTAIKEVPSTIKSWSHLRNLEMSYNDNLKEFPHALDI 614

Query: 530 ------------RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
                        I     K+  L TL+L GC  L   P++ + + ++  I  +   +  
Sbjct: 615 ITKLYFNDTEIQEIPLWVKKISRLQTLVLEGCKRLVTIPQLSDSLSNVTAI--NCQSLER 672

Query: 578 LPSSFENLPGLEVLFVEDCSKLDN 601
           L  SF N P + + F+ +C KL+N
Sbjct: 673 LDFSFHNHPKILLWFI-NCFKLNN 695



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 126/321 (39%), Gaps = 78/321 (24%)

Query: 423 NLRCSKVEQPWEGE--KACVPSSIQNFKYLSALSFKGCQSLRSFPSNL--HFVCPVTINF 478
           NL+  +   P++GE  +  +P  + N      L    C  ++  PSN    ++  + +  
Sbjct: 405 NLKFLRFHGPYDGEGKQLYLPQGLNNLPRKLRLIEWSCFPMKCLPSNFCTKYLVHIDMWN 464

Query: 479 SYCVNLIEFPQISGKVTRLYLGQSA-IEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
           S   N+ +  Q+ G + R+ L +S  ++E+P  +   T+LE L L GC  L         
Sbjct: 465 SKLQNMWQGNQVLGNLKRMDLWESKHLKELPD-LSTATNLEKLTLFGCSSL--------- 514

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS 597
                                                  ELPSS  NL  L +L +  CS
Sbjct: 515 --------------------------------------AELPSSLGNLQKLRMLNLRGCS 536

Query: 598 KLDNLPDNIGSLEYLYY--------------------ILAAASAISQLPSSVALSNMLRS 637
           KL+ LP NI                            ++   +AI ++PS++   + LR+
Sbjct: 537 KLEALPTNINLESLDDLDLADCLLIKSFPEISTNIKDLMLTYTAIKEVPSTIKSWSHLRN 596

Query: 638 LDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESL 696
           L+ S+   L+ FP      L  +  L+ +D  ++EIP  +  +S L+ L L G     ++
Sbjct: 597 LEMSYNDNLKEFPH----ALDIITKLYFNDTEIQEIPLWVKKISRLQTLVLEGCKRLVTI 652

Query: 697 PAIIKQMSQLRFIHLEDFNML 717
           P +   +S +  I+ +    L
Sbjct: 653 PQLSDSLSNVTAINCQSLERL 673



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 140/361 (38%), Gaps = 80/361 (22%)

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
           L  L+ + + +   L  LPD   +       L   S++++LPSS+     LR L+   C 
Sbjct: 477 LGNLKRMDLWESKHLKELPDLSTATNLEKLTLFGCSSLAELPSSLGNLQKLRMLNLRGCS 536

Query: 645 GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
            LE+ P T +   S   L       ++  P EI+  ++++ L L+    + +P+ IK  S
Sbjct: 537 KLEALP-TNINLESLDDLDLADCLLIKSFP-EIS--TNIKDLMLTYTAIKEVPSTIKSWS 592

Query: 705 QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE 764
            LR + +   + L+  P     +  L+  D ++ +    +P  ++ +             
Sbjct: 593 HLRNLEMSYNDNLKEFPHALDIITKLYFNDTEIQE----IPLWVKKISR----------- 637

Query: 765 LPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSK 824
               LQ L LE C  L ++P+L   L  +T  NC            L+ LD S       
Sbjct: 638 ----LQTLVLEGCKRLVTIPQLSDSLSNVTAINCQ----------SLERLDFS----FHN 679

Query: 825 HSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAIN 884
           H   L W             F NC KLN +A   I                         
Sbjct: 680 HPKILLW-------------FINCFKLNNEAREFI------------------------- 701

Query: 885 EKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDS 944
               +   +   LPG E+P  F+ +++GSSI + L         + F  C +LD KKVD+
Sbjct: 702 ----QTSCTFAFLPGREVPANFTYRANGSSIMVNLNQRRPLSTTLRFKACVLLD-KKVDN 756

Query: 945 D 945
           D
Sbjct: 757 D 757


>gi|297791725|ref|XP_002863747.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309582|gb|EFH40006.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 989

 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 206/649 (31%), Positives = 325/649 (50%), Gaps = 78/649 (12%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS------DVRGNSETAGGLEHLQKQ 60
           V++VGI G  GIGKT++A+ +F++ S  F  + F+        +   S    G  +++  
Sbjct: 213 VRMVGICGPSGIGKTSIARVLFNRLSRRFRCNVFIDRAFLSKSMEHYSGANLGDYNMKLH 272

Query: 61  MLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +    LSE L      I H     ER++  K+LI +DD+     L  L G  D FG GSR
Sbjct: 273 LQGIFLSEILGKRDIKICHLGAVGERLKNHKVLIFIDDLEYQVVLDTLAGHTDWFGCGSR 332

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +VV T+ K +L K  G   +IY V       + +  C +AF++NH P+       S  S 
Sbjct: 333 VVVITKYKHLL-KAHGI-GRIYEVPLPSNPLSLQILCQYAFRQNHPPDGF-MELASETSL 389

Query: 179 TKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
             GN PLVL VLGS L  + K +W  +L    R  + +  +I + LK+S+N L    ++I
Sbjct: 390 RAGNLPLVLNVLGSHLRSRDKKYWMDMLL---RFGKGQHGNIEETLKLSYNGLNKNDEAI 446

Query: 238 FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           F  IACFF GE+ D + S+L DS+ DV   +  L+DKSL+  + N + MH ++QE+G++I
Sbjct: 447 FRHIACFFNGEEVDDIKSLLADSDLDVNMGIKNLVDKSLIKETCNTVEMHSLIQEIGKEI 506

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            R +S  EPG+R  + D K++  +L+ N GT+ + GI LD+ +   +++   AF  M NL
Sbjct: 507 NRTQSS-EPGEREFIVDSKDVFTILEDNTGTENVLGISLDIDETDELHIHESAFKEMRNL 565

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           +  +              +ST+E     ++ LP   DYLP KLR L W  YPLR++PS F
Sbjct: 566 QFLR--------------ISTKENKEV-RLNLPEDFDYLPPKLRLLSWRGYPLRSMPSTF 610

Query: 415 KPKNLVELNLRCSKVEQPWEGEK----------------------------------AC- 439
            P++LV+L +R S  E  W+G +                                  AC 
Sbjct: 611 CPQSLVKLEMRYSYFEMLWDGVQPLTTLKKMDLWGSKNLKEIPDLSMATNLETLNLGACS 670

Query: 440 ----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT 495
               + SS+Q    L  L+   C++L + P+N +      +N   C ++  FP IS  ++
Sbjct: 671 SLVELHSSVQYLNKLKRLNLSYCENLETLPTNFNLQALDCLNLFGCSSIKSFPDISTNIS 730

Query: 496 RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC--LNLE 553
            L L Q+ IEEVP  IE  T+L  + +  C +L+ ++ +  KL+ L  +    C  L + 
Sbjct: 731 YLNLSQTRIEEVPWWIENFTELRTIYMWNCDKLEYVTLNISKLKHLAIVDFSDCGALKVA 790

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSS--FENLPGLEVLFVEDCSKLD 600
              +    +E    I+S      E+ SS  +++ P +E+ F+ +C KLD
Sbjct: 791 SLNDSPITVEMADNIHSKLPFYVEVSSSLPYDHFPRVELDFL-NCFKLD 838



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 139/322 (43%), Gaps = 42/322 (13%)

Query: 727  LKYLHLIDCKMLQSLPVLPFCLESLD---LTGCNMLRSLPELPLCLQYLNLEDCNMLRSL 783
            LK L+L  C+ L++LP   F L++LD   L GC+ ++S P++   + YLNL        +
Sbjct: 685  LKRLNLSYCENLETLPT-NFNLQALDCLNLFGCSSIKSFPDISTNISYLNLSQTR----I 739

Query: 784  PELPLCLQLLT------VRNCNRLQSLPEILLCLQELDASVLEKLS--KHSPDLQWAPES 835
             E+P  ++  T      + NC++L+ +         L+ S L+ L+    S        S
Sbjct: 740  EEVPWWIENFTELRTIYMWNCDKLEYVT--------LNISKLKHLAIVDFSDCGALKVAS 791

Query: 836  LKSAAICFEFTNC----LKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELR 891
            L  + I  E  +     L    + ++ +  D   R+    +   +L  E  + ++   + 
Sbjct: 792  LNDSPITVEMADNIHSKLPFYVEVSSSLPYDHFPRVELDFLNCFKLDQEALLQQQ--SVF 849

Query: 892  GSLIVLPGSEIPDWFSNQSSGSSIC-IQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYF 950
              LI+    E+P +F+++++G+S+  I L   S  +    F  CAV+DS+ +  D     
Sbjct: 850  KRLILPADQEVPSYFTHRTTGTSMTNIPLLQTSLSQPFFRFLACAVVDSEIISID----- 904

Query: 951  YVSFQFDLEIKTLSETK-HVDLGYNSRYIEDL-IDSDRVILGFKPCLNVGFP----DGYH 1004
            ++SF  ++  + +   + H    Y   Y     + S  VI      LN  +       Y 
Sbjct: 905  HISFLIEVNCQFIDGLRNHFGSAYWPMYFAAAPLGSHLVIFNCSLPLNGDYAYLAKRHYD 964

Query: 1005 HTIATFKFFAERKFYKIKRCGL 1026
            H    F+   +    K+K CG+
Sbjct: 965  HVDIQFRLTDDYSQIKLKGCGI 986



 Score = 46.6 bits (109), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 13/144 (9%)

Query: 616 LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF-LLGLSAMGLLHISDY-AVREI 673
           L A S++ +L SSV   N L+ L+ S+C+ LE+ P  F L  L  + L   S   +  +I
Sbjct: 666 LGACSSLVELHSSVQYLNKLKRLNLSYCENLETLPTNFNLQALDCLNLFGCSSIKSFPDI 725

Query: 674 PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI 733
              I+YL+      LS    E +P  I+  ++LR I++ + + L+ +      LK+L ++
Sbjct: 726 STNISYLN------LSQTRIEEVPWWIENFTELRTIYMWNCDKLEYVTLNISKLKHLAIV 779

Query: 734 ---DCKMLQ--SLPVLPFCLESLD 752
              DC  L+  SL   P  +E  D
Sbjct: 780 DFSDCGALKVASLNDSPITVEMAD 803


>gi|357499331|ref|XP_003619954.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494969|gb|AES76172.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1098

 Score =  273 bits (697), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 226/769 (29%), Positives = 363/769 (47%), Gaps = 137/769 (17%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S D V +VG++G GG+GK+TLAKAI++  + +FEG CF+ +VR NS     L+HLQ+++L
Sbjct: 214 SKDEVLMVGLYGTGGMGKSTLAKAIYNFVADQFEGVCFLHNVRENS-AHNNLKHLQEELL 272

Query: 63  STTL--SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           S T+  + KL      IP   KER+ R K+L++LDDV+++ QL+ L G LD FG GSR++
Sbjct: 273 SKTVRVNIKLGDVSEGIP-IIKERLSRKKILLILDDVDKLEQLEALAGGLDWFGCGSRVI 331

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK +L     E    Y V GL   EA E     AF++N  P          VSY  
Sbjct: 332 ITTRDKHLLNCHGIE--ITYAVKGLYGTEALELLRWMAFRDN-VPSGYEEILSRAVSYAS 388

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PLV+EV+ S+L  K    W   L    +I   +I +I   LK+S++ L    +S+FLD
Sbjct: 389 GLPLVIEVVASNLFGKSIEKWKSTLDGYEKIPNKKIQEI---LKVSYDDLEEEEQSVFLD 445

Query: 241 IACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSIS-------GNFLNMHDILQE 289
           IACFF+G    E ++ + +         + +L++KSL+ I+        + + +HD++++
Sbjct: 446 IACFFKGCRLSEVEETLLAHYGHCIKHHVGVLVEKSLIEINTQSHRSYNDDVALHDLIED 505

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAF 348
           MG++IVRQES KEPG+RSRLW   +I  VL+ + GT  IE I+L+   ++  I+ + + F
Sbjct: 506 MGKEIVRQESSKEPGERSRLWCHNDIVHVLQKDTGTSNIEMIYLNCPSMETIIDWNGKPF 565

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M+NL+       +F                        G  +LP  LR+L W   P +
Sbjct: 566 RKMTNLKTLIIENGRF----------------------SKGPKHLPSSLRFLKWKGCPSK 603

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
           +L S                          C+  S + F  +  ++   C+ L   P+  
Sbjct: 604 SLSS--------------------------CI--SNKEFNNMKFMTLDDCEYLTHIPNVS 635

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
                   +F  C NLI                     + +S+  L  LE+LD  GC+++
Sbjct: 636 GLSNLEKFSFRNCANLI--------------------TIHNSVGYLNKLEILDAYGCRKI 675

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPG 587
             +S    +L SL    L  C +L+ FPE+L KM +++ I   +   + E P  F+NL  
Sbjct: 676 --VSFPPLRLPSLKEFQLSWCKSLKKFPELLCKMSNIREIQLIECLDVEEFPFPFQNLSE 733

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
           L  L +  C  L   P +   L+++ +            S+V + ++  S  S  C    
Sbjct: 734 LSDLVINRCEML-RFPRHDDKLDFIVF------------SNVQMLDLNNSNLSDDC---- 776

Query: 648 SFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
                                    +P  + +  +++ L LS NNF+ LP  + +   L+
Sbjct: 777 -------------------------LPILLKWCVNVKYLNLSKNNFKILPECLSECHLLK 811

Query: 708 FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGC 756
            ++L+    L+ +  +P  L++L  ++C  L S        + L   GC
Sbjct: 812 HLYLDKCQYLEEIRGIPQNLEHLDAVNCYSLTSSCRRMLLSQKLHEAGC 860



 Score = 40.0 bits (92), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 179/435 (41%), Gaps = 98/435 (22%)

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNI-GSLEYLYYILAAASAISQLPSSVALSNM-LRSLD 639
           F  +  L+ L +E+  +    P ++  SL +L +    + ++S   S+   +NM   +LD
Sbjct: 565 FRKMTNLKTLIIEN-GRFSKGPKHLPSSLRFLKWKGCPSKSLSSCISNKEFNNMKFMTLD 623

Query: 640 SSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE------IPQEIAYLSSLEILYLSG-NN 692
              C+ L   P       +  GL ++  ++ R       I   + YL+ LEIL   G   
Sbjct: 624 D--CEYLTHIP-------NVSGLSNLEKFSFRNCANLITIHNSVGYLNKLEILDAYGCRK 674

Query: 693 FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC----LKYLHLIDCKMLQSLPVLPFC- 747
             S P +  ++  L+   L     L+  PEL LC    ++ + LI+C  ++  P  PF  
Sbjct: 675 IVSFPPL--RLPSLKEFQLSWCKSLKKFPEL-LCKMSNIREIQLIECLDVEEFP-FPFQN 730

Query: 748 ---LESLDLTGCNMLRSLPELPLCLQYLNLEDCNML----RSLPE--LPLCLQL-LTVR- 796
              L  L +  C MLR  P     L ++   +  ML     +L +  LP+ L+  + V+ 
Sbjct: 731 LSELSDLVINRCEMLR-FPRHDDKLDFIVFSNVQMLDLNNSNLSDDCLPILLKWCVNVKY 789

Query: 797 ---NCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNG 853
              + N  + LPE L     L    L+K  ++  +++  P++L+      +  NC  L  
Sbjct: 790 LNLSKNNFKILPECLSECHLLKHLYLDK-CQYLEEIRGIPQNLEH----LDAVNCYSLT- 843

Query: 854 KANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLP-GSE-IPDWFSNQSS 911
                              +S R    M +++KL E   +    P G+E IPDWF +Q  
Sbjct: 844 -------------------SSCR---RMLLSQKLHEAGCTRYYFPTGAERIPDWFEHQIR 881

Query: 912 GSS------------ICIQLPPHSSCRNLIGFAFCAVLDSKKVD------SDCFRYFYVS 953
           G +            ICI L P S    LI   F   ++ ++ D      S C  Y  +S
Sbjct: 882 GQTVSFWFRKKIPSIICILLLPGSK---LIP-RFNLFINGRRGDYSTDYLSSCPSYMNLS 937

Query: 954 ---FQFDLEIKTLSE 965
              F FDL ++  SE
Sbjct: 938 EHTFLFDLTLEETSE 952


>gi|357499227|ref|XP_003619902.1| Disease resistance protein [Medicago truncatula]
 gi|355494917|gb|AES76120.1| Disease resistance protein [Medicago truncatula]
          Length = 1660

 Score =  273 bits (697), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 231/769 (30%), Positives = 358/769 (46%), Gaps = 129/769 (16%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            M S + V++VGI+G GG+GK+TLAKA+F+  + +FEG CF+ +VR NS T   L+HLQK+
Sbjct: 568  MGSENEVRMVGIFGTGGMGKSTLAKAVFNSIADQFEGVCFLHNVRENS-TLKNLKHLQKK 626

Query: 61   MLS--TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            +LS       ++E     IP   KER+ R K+L++LDDV+++ QL  L G LD FG GSR
Sbjct: 627  LLSKIVKFDGQIEDVSEGIP-IIKERLSRKKILLILDDVDKLEQLDALAGGLDWFGLGSR 685

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            +++TTRDKR+L          + V GL   EA E     AFK +  P         VV+Y
Sbjct: 686  VIITTRDKRLLAYHVN--TSTHAVEGLNETEALELLSRNAFKNDKVPSSYEDILNRVVTY 743

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL +  +G++L  ++   W ++L +   I +    DI  IL++S++ L  + +S+F
Sbjct: 744  ASGLPLAIVTIGANLIGRKVEDWERILDEYENIPDK---DIQRILQVSYDALKEKDQSVF 800

Query: 239  LDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSI--SGNFLNMHDILQEMGR 292
            LDIAC F+G     V  IL       ++    +L +KSL+        + +HD++++MG+
Sbjct: 801  LDIACCFKGCKWTKVKKILHAHYGHPIEHHVGVLAEKSLIGHWEYDTHVTLHDLIEDMGK 860

Query: 293  QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS-KIKGINLDPRAFTNM 351
            ++VRQES K+PG+RSRLW   +I  VL+ N GT  IE I+L  +   +    D  A   M
Sbjct: 861  EVVRQESPKKPGERSRLWFRDDIVNVLRDNTGTGNIEMIYLKYAFTARETEWDGMACEKM 920

Query: 352  SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            +NL+                       L         G  YLP  LRY  W + PL++L 
Sbjct: 921  TNLK----------------------TLIIKDGNFSRGPGYLPSSLRYWKWISSPLKSL- 957

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
                                      +C+ S  + F Y+  ++  G Q L   P      
Sbjct: 958  --------------------------SCISS--KEFNYMKVMTLDGSQYLTHIPDVSGLP 989

Query: 472  CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
                 +F  C +LI                    ++ SSI  L  LE+LD  GC  L+  
Sbjct: 990  NLEKCSFRGCDSLI--------------------KIHSSIGHLNKLEILDTFGCSELEHF 1029

Query: 532  STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
                 +L SL    +  C++L++FPE+L +M ++K I    T I ELP SF+N   L+ L
Sbjct: 1030 PP--LQLPSLKKFEITDCVSLKNFPELLCEMTNIKDIEIYDTSIEELPYSFQNFSKLQRL 1087

Query: 592  FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
             +       NL    G L +  Y        +   +S+ +SN+                 
Sbjct: 1088 TISG----GNLQ---GKLRFPKY--------NDKMNSIVISNVEH--------------- 1117

Query: 652  TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN-NFESLPAIIKQMSQLRFIH 710
               L L+   L   SD     +P  + +  ++  L LS N NF  LP  + +  +L+ ++
Sbjct: 1118 ---LNLAGNSL---SDEC---LPILLKWFVNVTFLDLSCNYNFTILPECLGECHRLKHLN 1168

Query: 711  LEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNML 759
            L+    L  +  +P  L+ L  + C  L S  +     + L  +GC  +
Sbjct: 1169 LKFCKALVEIRGIPPNLEMLFAVMCYSLSSSSIRMLMSQKLHESGCTHI 1217


>gi|255542420|ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223548234|gb|EEF49725.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score =  273 bits (697), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 241/788 (30%), Positives = 365/788 (46%), Gaps = 142/788 (18%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+AK +++     F+GSCF+++VR  S+   GL  LQKQ++     EK      N   
Sbjct: 219 KTTIAKTVYNLNLDRFKGSCFLANVRKASKEPNGLIFLQKQLV-----EKFRNGKENKID 273

Query: 80  FTKERVRRM-------KLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKF 132
              E   ++       ++LIVLDDV+E+ QL   IG  +   QGS+I+VTTR +R+L   
Sbjct: 274 SVDEGSIKVIDVISCKRVLIVLDDVDELDQLNAFIGTWNSLFQGSKIIVTTRHERLLNPH 333

Query: 133 RGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSS 192
             ++K  +RV  L+  ++ + F   AF++NH  E    HS SVV +  G PL LEVLGS 
Sbjct: 334 DTQKK--FRVKELDDNDSLQLFSWHAFRQNHPIEGYKEHSESVVKHCCGVPLALEVLGSY 391

Query: 193 LCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP-RVKSIFLDIACFFEGEDKD 251
           L  K    W   L  L  I   +I      L+IS++ L   + K++FL IACFF G DKD
Sbjct: 392 LSDKMADEWESELEKLKAIPHPKIQKS---LQISYDSLQDDKYKNLFLHIACFFTGRDKD 448

Query: 252 FVASILDDSESDV---LDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRS 307
           +V  +LD  E      +  LID+ LV+I+  N L MH +L++MGR+IVRQES + PG RS
Sbjct: 449 YVVKVLDGCELYAKVGIQNLIDRHLVTINKDNKLMMHPLLRDMGREIVRQESPEHPGSRS 508

Query: 308 RLWDPKEISRVLKHNKGTDAIEGIFLDLS--------KIKGINLDPRAF---------TN 350
           RLW  ++   VL+ N GT+AI G+ LDL          I  IN   R             
Sbjct: 509 RLWHHEDTLTVLRENIGTEAIRGLTLDLQIIMQEQQHSISCINCAKRQHYEDLISKYREK 568

Query: 351 MSNLRLFKFY------VPKF-------YEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKL 397
            S L  F +       +P F       +E +    M   + L  + V+L    ++ P+ L
Sbjct: 569 RSRLGFFSWQPAEVGLIPPFPMSNEVVFETKAFAKMRQLKLLQLNYVKLDGRYEHFPRNL 628

Query: 398 RYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKG 457
            +L W  +P++++P     +NLV L++R S ++  W G +                   G
Sbjct: 629 IWLCWHGFPVKSIPLKLCLENLVVLDMRYSNLKHAWIGAR-------------------G 669

Query: 458 CQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDL 517
            + L+             ++FS+   L+  P +SG                     L +L
Sbjct: 670 LKQLK------------ILDFSHSYGLVSTPDLSG---------------------LPNL 696

Query: 518 EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
           E L L+ C  L  +  S   L  LV L L  C  L                        +
Sbjct: 697 ERLKLKSCINLVEVHKSIENLEKLVLLNLKDCKRLR-----------------------K 733

Query: 578 LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI----LAAASAISQLPSSVALSN 633
           LP     L  LE L +  CS+LD L   +  +E L  +        +A S+  +  +  +
Sbjct: 734 LPRKIVLLRSLEKLILSGCSELDKLSSELRKMESLKVLHMDGFKHYTAKSRQLTFWSWLS 793

Query: 634 MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF 693
             + +DSS          TFL    ++  L ++D  + +   +++ LSSL+ L LSGN+ 
Sbjct: 794 RRQGMDSS-------LALTFLP--CSLDHLSLADCDLSDDTVDLSCLSSLKCLNLSGNSI 844

Query: 694 ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLES--L 751
             LP  I  +++L  + L++   LQSL ELP  L+ L+  +C  L+ +  LP  + S  L
Sbjct: 845 SCLPKTISGLTKLESLVLDNCRSLQSLSELPASLRELNAENCTSLERITNLPNLMTSLRL 904

Query: 752 DLTGCNML 759
           +L GC  L
Sbjct: 905 NLAGCEQL 912



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 153/353 (43%), Gaps = 60/353 (16%)

Query: 657  LSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDF 714
            L  + LL++ D   +R++P++I  L SLE L LSG +  + L + +++M  L+ +H++ F
Sbjct: 717  LEKLVLLNLKDCKRLRKLPRKIVLLRSLEKLILSGCSELDKLSSELRKMESLKVLHMDGF 776

Query: 715  NMLQS----------------------LPELPLCLKYLHLIDCKMLQSLPVLPFCLESL- 751
                +                      L  LP  L +L L DC +      L  CL SL 
Sbjct: 777  KHYTAKSRQLTFWSWLSRRQGMDSSLALTFLPCSLDHLSLADCDLSDDTVDLS-CLSSLK 835

Query: 752  --DLTGCNMLRSLPELP---LCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCN---RLQS 803
              +L+G N +  LP+       L+ L L++C  L+SL ELP  L+ L   NC    R+ +
Sbjct: 836  CLNLSG-NSISCLPKTISGLTKLESLVLDNCRSLQSLSELPASLRELNAENCTSLERITN 894

Query: 804  LPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADS 863
            LP ++  L+ L+ +  E+L +     +  P +        E  N L L      + +   
Sbjct: 895  LPNLMTSLR-LNLAGCEQLVEVQGFFKLEPINNHDK----EMANMLGLFNLGPVETIKVE 949

Query: 864  LLRIRHMA--IASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
            +  +  M   I   ++ +E  I           I LPGSE+P W+S Q+ G  I   +PP
Sbjct: 950  MFSVMTMTSRITPPKVLHECGICS---------IFLPGSEVPGWYSPQNEGPLISFTMPP 1000

Query: 922  HSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYN 974
             S  R + G   C V     V +    + Y        IK  ++TK +   Y+
Sbjct: 1001 -SHVRKVCGLNICIVYTCNDVRNGLTDHHY--------IKIWNKTKDLKWTYS 1044


>gi|297846862|ref|XP_002891312.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337154|gb|EFH67571.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1159

 Score =  272 bits (696), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 227/759 (29%), Positives = 360/759 (47%), Gaps = 89/759 (11%)

Query: 90  LLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEE 149
            L++LDDV+ +GQL  L  E   FG GSR+++T  D+++L+        IY+V+    EE
Sbjct: 229 FLVILDDVDRLGQLDALAKETRWFGPGSRVIITMEDRKLLQGHGINH--IYKVDFPSTEE 286

Query: 150 AFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLN 209
           A + FC  AF +N   +     +  V +     PL L+V+GS      K  W   L  L 
Sbjct: 287 AVQIFCMNAFGQNSPKDGFEGLAWEVANLAGELPLGLKVMGSYFRGMSKEEWKSALPRLR 346

Query: 210 RICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LD 266
              + EI  I   +  S++ L+ + K +FL IACFF  ++ + V   L    S +   L 
Sbjct: 347 TSLDGEIESI---INFSYDALSDKDKELFLHIACFFNHKEMEKVEEHLAKKFSYLKQGLH 403

Query: 267 ILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNK-GT 325
           +L DKSL+SI+  ++ MH++L ++GR+IV ++S  EPG+R  L D +EI  VL  +  G+
Sbjct: 404 VLADKSLISINSTYMEMHNLLAQLGREIVCRQSINEPGQRQFLIDSREICEVLTDDATGS 463

Query: 326 DAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKV 384
             + GI L+  + +  +N+  R F  MSNL+  + Y                + ++  K+
Sbjct: 464 RNVIGIELNFGESEDELNISERGFEGMSNLQFLRIY---------------SDHINPGKM 508

Query: 385 QLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKAC----- 439
            LP GL+YL +KLR LHW  +P+   PS   P+ LVEL +  SK+E+ WEG K       
Sbjct: 509 FLPQGLNYLSRKLRLLHWIHFPMTCFPSIVNPEFLVELVMCHSKLEKLWEGIKPLRNLKW 568

Query: 440 ----------------------------------VPSSIQNFKYLSALSFKGCQSLRSFP 465
                                             +P SI N   L  L+   C +L   P
Sbjct: 569 MDLSSSVNLKVLPDLSTATNLKELDCSFCSSLVKLPFSIGNAINLEILNLYDCSNLVELP 628

Query: 466 SNL-HFVCPVTINFSYCVNLIEFPQISGKVTR---LYLGQ------------SAIEEVPS 509
           S++ + +     NF  C +L+E P   GK T+   L LG             S++ ++P 
Sbjct: 629 SSIGNLINIKKFNFRRCSSLVELPSSVGKATKLEELELGNATNLKELYLYNCSSLVKLPF 688

Query: 510 SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI- 568
           SI   + L+   + GC  L ++S+S      L  L    C +L   P  +    +L+ + 
Sbjct: 689 SIGTFSHLKKFKISGCSNLVKLSSSIGNATDLKELDFSFCSSLVELPSYIGNATNLELLD 748

Query: 569 YSDRTPITELPSSFEN-LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLP 626
               + + +LPSS  N +  L+ L    CS L  +P +IG    L Y+  +  S++ +LP
Sbjct: 749 LRGCSNLVQLPSSIGNAIVTLDRLDFSGCSSLVAIPSSIGKAINLKYLEFSGYSSLVELP 808

Query: 627 SSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL 686
           +S+   + L SL  + C  LE  P    + L ++  L ++D ++ +   EI+  +++  L
Sbjct: 809 ASIGNLHKLSSLTLNRCSKLEVLPIN--INLQSLEALILTDCSLLKSFPEIS--TNISYL 864

Query: 687 YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF 746
            LSG   E +P  I   S+L  +H+     L++ P     +  LHL D K+ +  P +  
Sbjct: 865 DLSGTAIEEVPLSISLWSRLETLHMSYSENLKNFPHALDIITDLHLSDTKIQEVAPWVKR 924

Query: 747 C--LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSL 783
              L  L L GCN L SLP+LP  L  L+ E+C  L  L
Sbjct: 925 ISRLRRLVLKGCNKLLSLPQLPDSLSELDAENCESLERL 963


>gi|3860165|gb|AAC72978.1| disease resistance protein RPP1-WsB [Arabidopsis thaliana]
          Length = 1221

 Score =  272 bits (695), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 236/790 (29%), Positives = 382/790 (48%), Gaps = 86/790 (10%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQ 58
            D V+++GIWG  GIGKTT+A+ +F+Q S  F+ S  + +++G        E +  L+ LQ
Sbjct: 278  DEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQ-LQ 336

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
             QMLS  ++ K       I H    +ER+R  K+ +VLD+V+++GQL  L  E   FG G
Sbjct: 337  NQMLSQMINHK----DIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPG 392

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SRI++TT D  VL K  G    +Y+V     +EAF+ FC  AF +    E  +  +R V+
Sbjct: 393  SRIIITTEDLGVL-KAHG-INHVYKVGYPSNDEAFQIFCMNAFGQKQPHEGFDEIAREVM 450

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            +     PL L+VLGS+L  K K  W + L  L    + +I     I++ S++ L    K 
Sbjct: 451  ALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGKIG---SIIQFSYDALCDEDKY 507

Query: 237  IFLDIACFFEGEDKDFVASILDD--SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
            +FL IAC F  E    V  +L         L IL  KSL+SI    + MH +L++ GR+ 
Sbjct: 508  LFLYIACLFNKESTTKVEGLLGKFLDVRQGLHILAQKSLISIEDGNIYMHTLLEQFGRET 567

Query: 295  VRQE-SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
             R++       K   L   ++I  VL  +          +D  +  GINLD   + N+  
Sbjct: 568  SRKQFIHHGYTKHQLLVGERDICEVLNDDT---------IDSRRFIGINLD--LYKNVEE 616

Query: 354  LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
            L + +  + + ++ +    ++ +    + ++Q   GL Y   ++R LHW  Y    LPS 
Sbjct: 617  LNISEKALERIHDFQ-FVRINGKNHALHERLQ---GLIYQSPQIRSLHWKCYQNICLPST 672

Query: 414  FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY---------------LSALSFKGC 458
            F  + LVEL++  SK+++ WEG K        +  Y               L  L  + C
Sbjct: 673  FNSEFLVELDMSFSKLQKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNC 732

Query: 459  QSLRSFPSNLHFVCPVTI-NFSYCVNLIEFPQISGKVTRLYL----GQSAIEEVPSSIEC 513
             SL   PS++  +  + I +   C +L+E P   G  T+L +      S++ ++P SI  
Sbjct: 733  SSLVELPSSIEKLTSLQILDLHRCSSLVELPSF-GNATKLEILNLENCSSLVKLPPSINA 791

Query: 514  LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDR 572
              +L+ L L  C R+  +  +     +L  L LL C +L   P  +    +LK + +   
Sbjct: 792  -NNLQELSLTNCSRVVELP-AIENATNLWKLNLLNCSSLIELPLSIGTATNLKHLDFRGC 849

Query: 573  TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILA-AASAISQLPSSVAL 631
            + + +LPSS  ++  LEV ++ +CS L  LP +IG+L  L  +L    S +  LP+++ L
Sbjct: 850  SSLVKLPSSIGDMTNLEVFYLSNCSNLVELPSSIGNLRKLTLLLMRGCSKLETLPTNINL 909

Query: 632  SNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS-- 689
             + L +L+   C  L+SFP       + +  L +   A++E+P  I   S L    +S  
Sbjct: 910  KS-LHTLNLIDCSRLKSFPEIS----THIKYLRLIGTAIKEVPLSIMSWSPLAHFQISYF 964

Query: 690  ------------------GNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
                                + + +P  +K+MS+LR + L + N L SLP+LP  L YL+
Sbjct: 965  ESLKEFPHALDIITELQLSKDIQEVPPWVKRMSRLRALRLNNCNNLVSLPQLPDSLAYLY 1024

Query: 732  LIDCKMLQSL 741
              +CK L+ L
Sbjct: 1025 ADNCKSLERL 1034


>gi|356559373|ref|XP_003547974.1| PREDICTED: TMV resistance protein N isoform 2 [Glycine max]
          Length = 1097

 Score =  272 bits (695), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 241/748 (32%), Positives = 351/748 (46%), Gaps = 106/748 (14%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           + D V +VGI G+GG+GKTTLA A+++  +  FE  CF+ +VR  S    GLE LQ  +L
Sbjct: 206 ADDVVHMVGIHGLGGVGKTTLAVAVYNSIACHFEACCFLENVRETS-NKKGLESLQNILL 264

Query: 63  STTLSE-KLEVA----GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           S T+ + K+EV     G +I    K +++  K+L+VLDDVNE  QL+ +I   D FG+GS
Sbjct: 265 SKTVGDMKIEVTNSREGTDI---IKRKLKEKKVLLVLDDVNEHEQLQAIIDSPDWFGRGS 321

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS--RSV 175
           R+++TTRD+++L       K+ Y+V  L  + A +     AF       D ++H      
Sbjct: 322 RVIITTRDEQLL--VLHNVKRTYKVRELNEKHALQLLTQKAFGLEK-KVDPSYHDILNRA 378

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           V+Y  G PL L+V+GS+L  K    W  VL    R   S    IY  LK+S++ L    K
Sbjct: 379 VTYASGLPLALKVIGSNLFGKSIEEWESVLDGYER---SPDKSIYMTLKVSYDALNEDEK 435

Query: 236 SIFLDIACFFEGED----KDFVASILDDSESDVLDILIDKSLVSISGNF-----LNMHDI 286
           SIFLDIAC F+  +    +D + +    S    + +L++KSL++I  ++     + +HD+
Sbjct: 436 SIFLDIACCFKDYELAKVQDILYAHYGRSMKYDIGVLVEKSLINIHRSWYDKEVMRLHDL 495

Query: 287 LQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDP 345
           ++++G++IVR+ES KEPGKRSRLW  ++I  VL+  KGT  IE I ++ S   K +  D 
Sbjct: 496 IEDVGKEIVRRESPKEPGKRSRLWSHEDIKEVLQEKKGTGKIEIICMNFSSFGKEVEWDG 555

Query: 346 RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
            A   M NL+                       L         G  +LP  LR L W   
Sbjct: 556 DALKKMENLK----------------------TLIIKSACFSKGPKHLPNSLRVLEWWRC 593

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
           P + LP NF PK L    L  S       G       S+ N   L++L    C SL   P
Sbjct: 594 PSQDLPHNFNPKQLAICKLPHSNFTSL--GLAPLFDKSVVN---LTSLILDECDSLTEIP 648

Query: 466 SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
                     ++F  C NL                      +  S+  L  L++LD +GC
Sbjct: 649 DVSCLSKLEKLSFKDCRNLF--------------------TIHPSVGLLEKLKILDAKGC 688

Query: 526 KRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL 585
             LK  S    KL SL +L L  C +LE FPEIL KME++  +     PIT+LP SF NL
Sbjct: 689 PELK--SFPPLKLTSLESLDLSYCSSLESFPEILGKMENITELDLSECPITKLPPSFRNL 746

Query: 586 PGLEVLFVEDCSK-LDNLPD--------NIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
             L+ L ++   +  D L D        NI  +  LY I A       LP          
Sbjct: 747 TRLQELELDHGPESADQLMDFDAATLISNICMMPELYDISARRLQWRLLPDDAL------ 800

Query: 637 SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL 696
            L S  C  + S              L +SD     +P  +++  ++E L L G+    +
Sbjct: 801 KLTSVVCSSVHSLT------------LELSDEL---LPLFLSWFVNVENLRLEGSKCTVI 845

Query: 697 PAIIKQMSQLRFIHLEDFNMLQSLPELP 724
           P  IK+   L  + L   + LQ +  +P
Sbjct: 846 PECIKECRFLSILILSGCDRLQEIRGIP 873


>gi|84313510|gb|ABC55465.1| TIR-NBS disease resistance-like protein [(Populus tomentosa x P.
           bolleana) x P. tomentosa var. truncata]
 gi|84313512|gb|ABC55466.1| TIR-NBS disease resistance-like protein [(Populus tomentosa x P.
           bolleana) x P. tomentosa var. truncata]
          Length = 642

 Score =  272 bits (695), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 177/459 (38%), Positives = 259/459 (56%), Gaps = 45/459 (9%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           ++D V+IVGI GM GIGKTTLAK +F+Q  + FEGSCF+SD+   S+   GL  LQKQ+L
Sbjct: 209 ATDDVRIVGIHGMSGIGKTTLAKVVFNQLCNGFEGSCFLSDINETSKQFNGLAGLQKQLL 268

Query: 63  STTLSEKLEVAGPNIPH----FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
              L  K +VA  +         KER+RR ++L+V DDV    QL  L+GE   FG GSR
Sbjct: 269 RDIL--KQDVANFDCVDRGKVLIKERIRRKRVLVVADDVAHPEQLNALMGERSWFGPGSR 326

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRD  VL K      + Y++  L+  E+ + F   A ++    ED    S+  V Y
Sbjct: 327 VIITTRDSSVLLK----ADQTYQIEELKPYESLQLFRWHALRDTKPTEDYIELSKDAVDY 382

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSI 237
             G PL LEV+G+ L  K +  W  V+  L RI      DI   L+ISF+ L    +++ 
Sbjct: 383 CGGIPLALEVMGACLSGKNRDGWKSVIDKLRRIPN---RDIQGKLRISFDALDGEELQNA 439

Query: 238 FLDIACFFEGEDKDFVASILD-----DSESDVLDILIDKSLVSISG-NFLNMHDILQEMG 291
           FLDIACFF    K++VA +L      + E D L+ L ++SL+ ++G   + MHD+L++MG
Sbjct: 440 FLDIACFFIDRKKEYVAKVLGARCGYNPEVD-LETLRERSLIKVNGFGKITMHDLLRDMG 498

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IVR+ S KEPGKR+R+W+ ++   VL+  KGTD +EG+ LD+   +  +L  R+F  M
Sbjct: 499 REIVRESSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLTLDVRASEAKSLSTRSFAKM 558

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
             L L                      L  + V L      L K+L ++ W   PL+ LP
Sbjct: 559 KCLNL----------------------LQINGVHLTGSFKLLSKELMWICWLQCPLKYLP 596

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYL 450
           S+F   NLV L+ + S +++ W+GEK  V + +Q+ K+L
Sbjct: 597 SDFILDNLVVLDTQYSNLKELWKGEK--VRNILQSPKFL 633


>gi|357506067|ref|XP_003623322.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355498337|gb|AES79540.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1204

 Score =  271 bits (694), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 220/734 (29%), Positives = 342/734 (46%), Gaps = 123/734 (16%)

Query: 8   QIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLS 67
           Q++GIWGMGGIGKTTLA  ++D+ S++F+  C++ +V    E  GG   +QK++L  T+ 
Sbjct: 212 QVLGIWGMGGIGKTTLATVLYDRISYQFDTRCYIENVHKIYE-EGGANAVQKEILRRTIE 270

Query: 68  EKL--EVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
           EK+    + P I    ++R++  KLL+VLD+V+++ QL  L  +       SR+++ TRD
Sbjct: 271 EKILDTYSPPEIARIVRDRLQNKKLLVVLDNVDQIEQLDELDIKRVFLRPESRLIIITRD 330

Query: 126 KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
           + +L     +   +Y V                       E +N     V+ YT+G PL 
Sbjct: 331 QHILRACGAD--IVYEV-----------------------ELMNELIPEVLKYTQGLPLA 365

Query: 186 LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF 245
           + V+GS L  +    W   L   +R+  S    I  +L++S+  L    K IFL +ACFF
Sbjct: 366 IRVIGSFLHSRNAKQWRAAL---DRLQNSPPDKILKVLQVSYEGLEEEDKEIFLHVACFF 422

Query: 246 EGEDKDFVASILDDS--ESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKE 302
           +GE KD+V+ ILD      D+ + +L +KS+++I    ++MH++LQE+G++IVR E   E
Sbjct: 423 KGERKDYVSRILDACGLHPDIGIPLLAEKSVITIKNEEIHMHEMLQELGKKIVRGEHPDE 482

Query: 303 PGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVP 362
           PG  SRLW  ++   V+   K     + I L+  K      +     ++S L   K  + 
Sbjct: 483 PGFWSRLWLYRDFHHVMMTQKKAIEAKAIVLN-QKEDDFKFNELRAEDLSKLEHLKLLIL 541

Query: 363 KFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
                   PS                   +L   LRYL W+ YP  +LPSNF+P +LVEL
Sbjct: 542 NHKNFSGRPS-------------------FLSNSLRYLLWNDYPFISLPSNFQPYHLVEL 582

Query: 423 NLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
           NL  S VEQ W        + IQ   YL  +     ++L+  P          ++F+ C+
Sbjct: 583 NLPGSSVEQLW--------TDIQQMPYLKRMDLSNSKNLKMTPCFKGMQNLERLDFAGCI 634

Query: 483 NLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL-----KRISTSFCK 537
           +L                      V  SI  L +L+ L L+ C  L      R+S S   
Sbjct: 635 SLWH--------------------VHPSIGLLRELQFLSLQNCTSLVCFEFGRVSES--- 671

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR-TPITELPSSFENLPGLEVLFVEDC 596
             SL  L L GC  LE+ P+  EK+ +L+ +  D+ T + ++  S  +L  L  L +  C
Sbjct: 672 -SSLRVLCLSGCTKLENTPD-FEKLLNLEYLDMDQCTSLYKIDKSIGDLTKLRFLSLRGC 729

Query: 597 SKLDNLPDNIGSLEYLYYI-LAAASAISQLP----SSVALSNMLRSLDSSHCKGLESFPR 651
           + L  +PD+  ++  L  + L   S  + LP    SS      L SLD S C        
Sbjct: 730 TNLVIIPDSFNNMTNLMTLDLCGCSRFTNLPLGSVSSFHTQQSLISLDLSFCN------- 782

Query: 652 TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
                             +  +P  I  L  LE L L GNNF  LP  I+++S L +++L
Sbjct: 783 ------------------ISIVPDAIGELRGLERLNLQGNNFTELPCTIQRLSSLAYLNL 824

Query: 712 EDFNMLQSLPELPL 725
              + LQ  P +P+
Sbjct: 825 SHCHRLQIWPLIPI 838



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 124/305 (40%), Gaps = 55/305 (18%)

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           +  L L  S++E++ + I+ +  L+ +DL   K LK ++  F  +++L  L   GC++L 
Sbjct: 579 LVELNLPGSSVEQLWTDIQQMPYLKRMDLSNSKNLK-MTPCFKGMQNLERLDFAGCISLW 637

Query: 554 HF-PEI--LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
           H  P I  L +++ L           E     E+   L VL +  C+KL+N PD    L 
Sbjct: 638 HVHPSIGLLRELQFLSLQNCTSLVCFEFGRVSES-SSLRVLCLSGCTKLENTPDFEKLLN 696

Query: 611 YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV 670
             Y  +   +++ ++  S+     LR L    C  L   P +F                 
Sbjct: 697 LEYLDMDQCTSLYKIDKSIGDLTKLRFLSLRGCTNLVIIPDSF----------------- 739

Query: 671 REIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY 729
                    +++L  L L G + F +LP             +  F+  QSL  L L    
Sbjct: 740 -------NNMTNLMTLDLCGCSRFTNLP----------LGSVSSFHTQQSLISLDLSFCN 782

Query: 730 LHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQ------YLNLEDCNMLRSL 783
           + ++   + +        LE L+L G N      ELP  +Q      YLNL  C+ L+  
Sbjct: 783 ISIVPDAIGELRG-----LERLNLQGNN----FTELPCTIQRLSSLAYLNLSHCHRLQIW 833

Query: 784 PELPL 788
           P +P+
Sbjct: 834 PLIPI 838


>gi|15240889|ref|NP_198651.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758812|dbj|BAB09346.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006918|gb|AED94301.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 833

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 211/684 (30%), Positives = 343/684 (50%), Gaps = 117/684 (17%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG--------NSETAGGLE 55
           SD V+++GIWG  GIGKTT+A+ ++ QFS  FE S F+ +++         + E +  ++
Sbjct: 43  SDEVRMIGIWGPSGIGKTTIARVLYSQFSENFELSIFMGNIKELMYTRPVCSDEYSAKIQ 102

Query: 56  HLQKQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
            LQKQ LS  ++ K +E+    +    ++R+   K+LIVLD +++  QL  +  E   FG
Sbjct: 103 -LQKQFLSQIINHKDMELHHLGV---AQDRLNDKKVLIVLDSIDQSIQLDAIAKETRWFG 158

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP---EDLNWH 171
            GSRI++TT+D+++L K  G    IY+V      EA++ FC +AF +N      E+L W 
Sbjct: 159 HGSRIIITTQDQKLL-KAHGI-NHIYKVEFPSAYEAYQMFCMYAFGQNFPNDGFEELAWE 216

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT 231
              ++ +    PL L V+GS      +  W   L  L    ++ I  I   LK S++ L 
Sbjct: 217 VTKLLGHL---PLGLRVMGSHFRGMSRHEWVNALPRLKIRLDASIQSI---LKFSYDALC 270

Query: 232 PRVKSIFLDIACFFEGED----KDFVA-SILDDSESDVLDILIDKSLV-----SISGNFL 281
              K +FL IAC F  ++    +D++A S LD  +     +L +KSL+     S +   +
Sbjct: 271 EEDKDLFLHIACLFNNQEMVEVEDYLALSFLDVRQG--FHLLAEKSLINLKFLSTNCTRI 328

Query: 282 NMHDILQEMGRQIVRQ----ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK 337
            MH++L ++G+ IVR     +S  EPGKR  L D ++I  VL  N G   + GIFL++  
Sbjct: 329 EMHNLLVQLGKDIVRHKPGHQSICEPGKRQFLIDARDICEVLTDNTGNRNVVGIFLEVRN 388

Query: 338 IK-GINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKK 396
           +   +N+  RAF  MSNL+  +F+ P  Y+ E              K+ LP GL+ LP+K
Sbjct: 389 LSCQLNISERAFDGMSNLKFLRFHDP--YDDES------------DKLYLPQGLNNLPQK 434

Query: 397 LRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK------------------- 437
           LR + W  +P+  LPSNF  K LVE+ ++ SK++  W+G +                   
Sbjct: 435 LRLIEWSRFPMTCLPSNFCTKYLVEIRMKNSKLQNLWQGNQPLGNLKRMDLSESKHLKEL 494

Query: 438 ---------------ACV-----PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
                           C+     PSSI   + L  LS +GC  L + P+N++      ++
Sbjct: 495 PDLSTATNLEYLIMSGCISLVELPSSIGKLRKLLMLSLRGCSKLEALPTNINLESLDYLD 554

Query: 478 FSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR------- 530
            + C+ + +FP+IS  +  L L ++AI+EVPS+I+  + L  L++   + LK        
Sbjct: 555 LTDCLLIKKFPEISTNIKDLKLTKTAIKEVPSTIKSWSHLRKLEMSYSENLKELPHALDI 614

Query: 531 ISTSFC-------------KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
           I+T +              K+  L TL L GC  L   P++ + +  L  + ++   +  
Sbjct: 615 ITTLYINDTEMQEIPQWVKKISHLQTLGLEGCKRLVTIPQLSDSLSQL--VVTNCESLER 672

Query: 578 LPSSFENLPGLEVLFVEDCSKLDN 601
           L  SF+N P   + F+ +C KL+N
Sbjct: 673 LNFSFQNHPERFLWFL-NCFKLNN 695



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 161/416 (38%), Gaps = 106/416 (25%)

Query: 554 HFPEILEKM-EHLKRIYSDRTPITELPSSF----------------------ENLPGLEV 590
           + P+ L  + + L+ I   R P+T LPS+F                      + L  L+ 
Sbjct: 423 YLPQGLNNLPQKLRLIEWSRFPMTCLPSNFCTKYLVEIRMKNSKLQNLWQGNQPLGNLKR 482

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           + + +   L  LPD   +    Y I++   ++ +LPSS+     L  L    C  LE+ P
Sbjct: 483 MDLSESKHLKELPDLSTATNLEYLIMSGCISLVELPSSIGKLRKLLMLSLRGCSKLEALP 542

Query: 651 RTFLLGLSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
               + L ++  L ++D   +++ P EI+  ++++ L L+    + +P+ IK  S LR +
Sbjct: 543 TN--INLESLDYLDLTDCLLIKKFP-EIS--TNIKDLKLTKTAIKEVPSTIKSWSHLRKL 597

Query: 710 HLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCL 769
            +     L+ LP     +  L++ D +M Q +P                ++ +  L    
Sbjct: 598 EMSYSENLKELPHALDIITTLYINDTEM-QEIP--------------QWVKKISHL---- 638

Query: 770 QYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDL 829
           Q L LE C  L ++P+L   L  L V NC  L+ L                    H    
Sbjct: 639 QTLGLEGCKRLVTIPQLSDSLSQLVVTNCESLERLN--------------FSFQNHPERF 684

Query: 830 QWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSE 889
            W             F NC KLN +A   I   S                          
Sbjct: 685 LW-------------FLNCFKLNNEAREFIQTSS-------------------------- 705

Query: 890 LRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSD 945
              +  +LP  E+P  F+ +++GSSI + L  H      + F  C +L  KK+D+D
Sbjct: 706 ---THAILPSREVPANFTYRANGSSIMVNL-NHRPLSTTLRFKACVLL-VKKIDND 756


>gi|357478623|ref|XP_003609597.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
 gi|355510652|gb|AES91794.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
          Length = 1350

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 199/597 (33%), Positives = 304/597 (50%), Gaps = 98/597 (16%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + +S+ V ++GIWGMGG+GKTT+AKAI++Q   +F+G  F+ ++R   ET      LQ+Q
Sbjct: 406 IQNSEDVLLLGIWGMGGVGKTTIAKAIYNQIGRKFDGRSFLLNIREFCETDANHVSLQQQ 465

Query: 61  ML-----STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           +L     +T    +   +G NI    KER+ + ++L+VLDDVNE+ QLK L G  + FG 
Sbjct: 466 ILCDVYKTTAFKIRDIESGKNI---LKERLAQNRVLLVLDDVNELDQLKALCGSREWFGP 522

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           GSRI++TTRD  +L   R +   +Y +  ++  E+ E F   AFK+    E    HS  V
Sbjct: 523 GSRIIITTRDMHLLRSSRVD--LVYTIEEMDESESLELFSWHAFKQPSPAEGFATHSTDV 580

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           ++Y+   PL LEVLG  L     + W KVL  L  I   E+                  K
Sbjct: 581 IAYSGRLPLALEVLGCYLSDCEITEWQKVLEKLKCIPHDEVQ-----------------K 623

Query: 236 SIFLDIACFFEGEDK-----DFVASILDDSESDVLDILIDKSLVSISG-NFLNMHDILQE 289
           ++FLD       + K      F A I        + +L+++SLV++   N L MHD+L++
Sbjct: 624 NLFLDWNGIKMMQIKILNGCGFFADI-------GIKVLVERSLVTVDNRNKLRMHDLLRD 676

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFT 349
           MGRQI+ +ES  +P  RSRLW  +E+  VL   KGT+A++G+ L   +   + L+ +AF 
Sbjct: 677 MGRQIIYEESPFDPENRSRLWRREEVYDVLLKQKGTEAVKGLALVFPRKNKVCLNTKAFK 736

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
            M+ LRL                      L  S VQL     YL  +LR+L+W  +PL  
Sbjct: 737 KMNKLRL----------------------LQLSGVQLNGDFKYLSGELRWLYWHGFPLTY 774

Query: 410 LPSNFKPKNLVELNLRCSKVEQPW-EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            P+ F+  +L+ + L+ S ++Q W EG+       ++N K L                  
Sbjct: 775 TPAEFQQGSLIVIQLKYSNLKQIWKEGQM------LKNLKIL------------------ 810

Query: 469 HFVCPVTINFSYCVNLIEFPQIS--GKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGC 525
                   N S+ ++L E P  S    + +L L    ++  V  SI  L  L +++L  C
Sbjct: 811 --------NLSHSLDLTETPDFSYMPNLEKLVLKDCPSLSTVSHSIGSLHKLLLINLTDC 862

Query: 526 KRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
            RL+++  S  KL+SL TLIL GC  ++   E LE+ME L  + +D+T IT++P S 
Sbjct: 863 IRLRKLPRSIYKLKSLETLILSGCSMIDKLEEDLEQMESLTTLIADKTAITKVPFSI 919



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 11/163 (6%)

Query: 141 RVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSH 200
           +VN L F      F   AF +   P+  +  SR +V+Y+KG PL L+ LG  L  K    
Sbjct: 49  KVNRLSF------FNWGAFSQATTPQGFSELSRQLVAYSKGLPLALKALGEFLHGKDALE 102

Query: 201 WGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDS 260
           W +VL  L R    +  ++   L+ SF+ L    K IFLDIACFF G D+++V   ++ S
Sbjct: 103 WKRVLKSLERFSFPD-QEVLQALETSFDDLKDEEKHIFLDIACFFNGMDQNYVLRTINRS 161

Query: 261 ---ESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQES 299
               S  + +L DKSL++I   N L MH +LQ M R I+++ES
Sbjct: 162 TQCTSLQISLLEDKSLLTIGENNKLEMHGLLQAMARDIIKRES 204


>gi|297790452|ref|XP_002863116.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308940|gb|EFH39375.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1090

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 229/763 (30%), Positives = 367/763 (48%), Gaps = 157/763 (20%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN-----SETAGGLEHLQ 58
           SD V+++GIWG  GIGKTT+A+ I+++ S  F+ S F+  +        S+       LQ
Sbjct: 255 SDEVRMIGIWGPSGIGKTTIARVIYNKLSGSFQLSVFMESIEAKYTRPCSDDYSAKLQLQ 314

Query: 59  KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           +Q +S   ++    +   I H    ++R++  K+L+VLD V++  QL  ++ E   FG G
Sbjct: 315 QQFMSQITNQ----SDMKISHLGVVQDRLKDKKVLVVLDGVDKSMQLDAMVKETWWFGPG 370

Query: 117 SRIVVTTRDKRVLEKFRGEE-KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           SRI++TT+D+++   FR      IY+++    EEA +  C +AF +N         S +V
Sbjct: 371 SRIIITTQDRKL---FRSHGINHIYKIDFPSTEEALQILCTYAFGQN---------SPNV 418

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSH-----WGKVLHDLNRICESEIHDIYDILKISFNKL 230
           V                  L RK H     W K L  L    ++   +I  ILK S++ L
Sbjct: 419 VLKN---------------LLRKLHNLLMEWMKALPRLRNSLDA---NILSILKFSYDAL 460

Query: 231 TPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDIL 287
               K +FL IACFF  E+ + V   L ++  DV   L++L +KSL+S++  ++NMHD+L
Sbjct: 461 DDEDKYLFLHIACFFNHEEIEKVEDYLAETFLDVSHRLNVLAEKSLISLNRGYINMHDLL 520

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHN-KGTDAIEGIFLDLS--KIK-GINL 343
            ++GR IVR++S +EPG+R  L D +EI  VL  +  G+ ++ GI  +    +IK  +++
Sbjct: 521 VKLGRDIVRKQSIREPGQRLFLVDAREICEVLNLDANGSRSLMGINFNFGEDRIKEKLHI 580

Query: 344 DPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWD 403
             RAF  MSNL+  +                   + + + + LP+GL+Y+ +KLR LHW 
Sbjct: 581 SERAFQGMSNLQFLRV------------------KGNNNTIHLPHGLEYISRKLRLLHWT 622

Query: 404 TYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRS 463
            +P+  LP  F  + LVEL++  SK+E+ WEG K  +PSSI N   L  L       L  
Sbjct: 623 YFPMTCLPPIFNTEFLVELDMSYSKLEKLWEGIK--LPSSIGNLINLKELDLSSLSCLVE 680

Query: 464 FPSNL-HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ----SAIEEVPSSIECLTDLE 518
            PS++ + +    ++ S    L+E P   G  T L +      S++ ++P SI  L  L+
Sbjct: 681 LPSSIGNLINLKELDLSSLSCLVELPFSIGNATNLEVLNLRQCSSLVKLPFSIGNLQKLQ 740

Query: 519 VLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITEL 578
            L LRGC +L+ +  +  KL SL  L L  CL L+ FPEI   +E L+    D T I E+
Sbjct: 741 TLTLRGCSKLEDLPANI-KLGSLGELDLTDCLLLKRFPEISTNVEFLRL---DGTAIEEV 796

Query: 579 PSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSL 638
           PSS           ++  S+L+                                     +
Sbjct: 797 PSS-----------IKSWSRLN------------------------------------EV 809

Query: 639 DSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPA 698
           D S+ + L++FP  F      +  LH+++  ++E P  +   S L +L L G        
Sbjct: 810 DMSYSENLKNFPHAF----DIITELHMTNTEIQEFPPWVKKFSRLTVLILKG-------- 857

Query: 699 IIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
                             L SLP++P  + Y++  DC+ L+ L
Sbjct: 858 ---------------CKKLVSLPQIPDSITYIYAEDCESLERL 885


>gi|356558276|ref|XP_003547433.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1106

 Score =  271 bits (693), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 233/755 (30%), Positives = 371/755 (49%), Gaps = 95/755 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAG-PNIP 78
           K+TLA+ + ++    FEG  F+++ R  S    GL  L++++ S  L   +++    ++P
Sbjct: 217 KSTLAEKVLNKLRSGFEGCYFLANEREQS-NRHGLISLKEKIFSELLGYDVKIDTLYSLP 275

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
                R+  MK+L++LDDVN++  L++L+G LD FG GSRI+VTTRD++VL+  + +E  
Sbjct: 276 EDIVRRISCMKVLLILDDVNDLDHLEKLLGTLDNFGSGSRIIVTTRDEQVLKANKVDE-- 333

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IYR+     ++A E F    F ++    + +  S  VV Y +G PLVL+VL   L  ++K
Sbjct: 334 IYRLREFNHDKALEFFNLNTFNQSDDQREYSTLSEKVVDYARGIPLVLKVLAHLLRGRKK 393

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGE----DKDFVA 254
             W   L  L R+  +    +YD +K+S++ L  + + +FLD+ACFF       +   V 
Sbjct: 394 EIWESELDKLRRMPPTT---VYDAMKLSYDDLDRKEQQLFLDLACFFLRSHIIVNVSNVK 450

Query: 255 SILDDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSR 308
           S+L D ESD      L+ L DK+L++IS  N ++MHD LQEM  +IVR+E   +P  RS 
Sbjct: 451 SLLKDGESDNSVVVGLERLKDKALITISEDNCISMHDCLQEMAWEIVRRE---DPESRSW 507

Query: 309 LWDPK-EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEI 367
           LWDP  +I   L+++K T+AI  I + L   K   L    F  M  L+  +      Y  
Sbjct: 508 LWDPNDDIYEALENDKCTEAIRSIRIHLPTFKKHKLCRHIFAKMRRLQFLETSGEYRYNF 567

Query: 368 EKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCS 427
           +                 L  GL +L  +L++L W  YPL+ LP NF P+ LV LN+   
Sbjct: 568 DCFDQHDI----------LAEGLQFLATELKFLCWYYYPLKLLPENFSPEKLVILNMPGG 617

Query: 428 KVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEF 487
           ++E+ W G        ++N   L  L     Q L+  P           + S   NL   
Sbjct: 618 RIEKLWHG--------VKNLVNLKQLDLGWSQMLKELP-----------DLSKARNL--- 655

Query: 488 PQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILL 547
                    L  G S +  V  SI  L  LE LDL  C+ L R+++  C L SL  L L 
Sbjct: 656 ------EVLLLGGCSMLSSVHPSIFSLPKLEKLDLWNCRSLTRLASD-CHLCSLCYLNLD 708

Query: 548 GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
            C NL  F  I E M+ L   +   T +  LPS+F     L+ L ++  S ++ LP +I 
Sbjct: 709 YCKNLTEFSLISENMKELGLRF---TKVKALPSTFGCQSKLKSLHLKG-SAIERLPASIN 764

Query: 608 SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD 667
           +L  L ++    S   +L +   L   L +LD   C  L +                   
Sbjct: 765 NLTQLLHL--EVSRCRKLQTIAELPMFLETLDVYFCTSLRT------------------- 803

Query: 668 YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCL 727
             ++E+P    +L +L +      + +SL  + +    L+ +++++   LQ+LP+LP  L
Sbjct: 804 --LQELP---PFLKTLNV-----KDCKSLQTLAELPLSLKTLNVKECKSLQTLPKLPPLL 853

Query: 728 KYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSL 762
           + L++  C  LQ+LP LP  +++L    C  L+++
Sbjct: 854 ETLYVRKCTSLQTLPELPCFVKTLYAIYCTSLKTV 888



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 200/419 (47%), Gaps = 28/419 (6%)

Query: 575  ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSN 633
            + ELP        LEVL +  CS L ++  +I SL  L  + L    ++++L S   L +
Sbjct: 643  LKELPD-LSKARNLEVLLLGGCSMLSSVHPSIFSLPKLEKLDLWNCRSLTRLASDCHLCS 701

Query: 634  MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF 693
            +   L+  +CK L  F     L    M  L +    V+ +P      S L+ L+L G+  
Sbjct: 702  LC-YLNLDYCKNLTEFS----LISENMKELGLRFTKVKALPSTFGCQSKLKSLHLKGSAI 756

Query: 694  ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDL 753
            E LPA I  ++QL  + +     LQ++ ELP+ L+ L +  C  L++L  LP  L++L++
Sbjct: 757  ERLPASINNLTQLLHLEVSRCRKLQTIAELPMFLETLDVYFCTSLRTLQELPPFLKTLNV 816

Query: 754  TGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQE 813
              C  L++L ELPL L+ LN+++C  L++LP+LP  L+ L VR C  LQ+LPE+   ++ 
Sbjct: 817  KDCKSLQTLAELPLSLKTLNVKECKSLQTLPKLPPLLETLYVRKCTSLQTLPELPCFVKT 876

Query: 814  LDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIA 873
            L A     L K       A E LK       F NCLKL+  +   I   + + +   A  
Sbjct: 877  LYAIYCTSL-KTVLFPSTAVEQLKENRTRVLFLNCLKLDEHSLEAIGLTAQINVMKFANQ 935

Query: 874  SLRL----------GYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL--PP 921
             L             Y+   N    +   ++ + PGS +P+W   +++   I I L   P
Sbjct: 936  HLSTPNHDHVENYNDYDYGDNHHSYQ---AVYLYPGSSVPEWMEYKTTKDYINIDLSSAP 992

Query: 922  HSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQF-DLEIKTLSETKHVDLGYNSRYIE 979
            +S    L+ F FC VLD K  D+     FYV+    D E +   ++  + +GY    IE
Sbjct: 993  YSP---LLSFIFCFVLD-KYRDTALIERFYVNITVNDGEGERKKDSVRMHIGYLDSTIE 1047


>gi|356545161|ref|XP_003541013.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1114

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 231/767 (30%), Positives = 357/767 (46%), Gaps = 124/767 (16%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S + V++VGI GM GIGKT LA+A++++ S +F+  C V DV    + +G L  +QKQ
Sbjct: 215 LGSVNDVRVVGISGMSGIGKTELARALYERISDQFDVHCLVDDVSKIYQDSGRL-GVQKQ 273

Query: 61  MLSTTLSEK-LEVAGPNIPH-FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF----- 113
           +LS  L+EK LE+   +       +R++  K L+V D+V    QL+   G  D       
Sbjct: 274 LLSQCLNEKNLEIYDVSQGTCLAWKRLQNAKALVVFDEVVNERQLQMFTGNRDSLLRECL 333

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSR 173
           G GSRI++ +RD+ +L     ++  +Y+V  L+ EEA + FC  AFK+N         + 
Sbjct: 334 GGGSRIIIISRDEHILRTHGVDD--VYQVPLLDREEAVQLFCKNAFKDNFIMSGYAEFAD 391

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            ++S  +GNPL ++ +GSSL       W   +  L    E +  DI D+L+ISF++L   
Sbjct: 392 VILSQAQGNPLAIKAVGSSLFGLNAPQWRSAVAKLR---EQKSRDIMDVLRISFDELDDT 448

Query: 234 VKSIFLDIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEM 290
            K IFLDIACFF       V  ILD         L +L D+SL+      + MH +L ++
Sbjct: 449 NKEIFLDIACFFNNFYVKSVMEILDFRGFYPEHGLQVLQDRSLIINEYGIIGMHGLLIDL 508

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL-SKIKGIN-LDPRAF 348
           GR IVR++S KEP   SRLW  +++ +++ +N   + +E I +D  S  +G + +   A 
Sbjct: 509 GRCIVREKSPKEPSNWSRLWKYQDLYKIMSNNMAAEKLEAIAVDYESDDEGFHEIRVDAL 568

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
           + MS+L+L K +                       V     L++L  +L Y+ WD YP  
Sbjct: 569 SKMSHLKLLKLW----------------------GVTSSGSLNHLSDELGYITWDKYPFV 606

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            LP +F+P  LVEL L  S ++  W+  K      + N + L                  
Sbjct: 607 CLPKSFQPNKLVELCLEYSNIKHLWKDRKP-----LHNLRRLV----------------- 644

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
                     S+  NLIE P          LG++             +LE LDL+GC +L
Sbjct: 645 ---------LSHSKNLIELPD---------LGEA------------LNLEWLDLKGCIKL 674

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
           K+I+ S   LR L  L L  C +L   P   E +          T +  +  S   L  L
Sbjct: 675 KKINPSIGLLRKLAYLNLKDCTSLVELPHFKEDLNLQHLTLEGCTHLKHINPSVGLLRKL 734

Query: 589 EVLFVEDCSKLDNLPDNI---GSLEYLYYILAAASAISQLPSSVALSNMLRSL----DSS 641
           E L +EDC  L +LP++I    SL+YL     +    S L      + +L+ L     S+
Sbjct: 735 EYLILEDCKSLVSLPNSILCLNSLKYLSLYGCSGLYNSGLLKEPRDAELLKQLCIGEAST 794

Query: 642 HCKGLESFPRTFLLGL------------------------SAMGLLHISDYAVREIPQEI 677
             K + S  + + +                           +M  L +S   + +IP  I
Sbjct: 795 DSKSISSIVKRWFMWSPRLWYSRAHNDSVGCLLPSAPTIPPSMIQLDLSYCNLVQIPDAI 854

Query: 678 AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
             L  LEIL L GN+F +LP  +K +S+LR++ L+    L+  P+LP
Sbjct: 855 GNLHCLEILNLEGNSFAALPD-LKGLSKLRYLKLDHCKHLKDFPKLP 900



 Score = 43.1 bits (100), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 727 LKYLHLIDCKMLQSLPVLP--FCLESLDLTGCNMLRSL-PELPLC--LQYLNLEDCNMLR 781
           L YL+L DC  L  LP       L+ L L GC  L+ + P + L   L+YL LEDC  L 
Sbjct: 687 LAYLNLKDCTSLVELPHFKEDLNLQHLTLEGCTHLKHINPSVGLLRKLEYLILEDCKSLV 746

Query: 782 SLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKL 822
           SLP   LCL  L   +      L    L  +  DA +L++L
Sbjct: 747 SLPNSILCLNSLKYLSLYGCSGLYNSGLLKEPRDAELLKQL 787


>gi|255567754|ref|XP_002524855.1| ATP binding protein, putative [Ricinus communis]
 gi|223535818|gb|EEF37479.1| ATP binding protein, putative [Ricinus communis]
          Length = 673

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 166/422 (39%), Positives = 244/422 (57%), Gaps = 34/422 (8%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNIP 78
           KTT+AKA+F+Q    FE  CF+S+V+  SE   GL  LQ+Q+L   L  K L++   +  
Sbjct: 233 KTTIAKAVFNQLCDGFEVRCFLSNVKEISEQPNGLIQLQEQLLRAVLKPKSLQIGSVDRG 292

Query: 79  -HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
            +  +ER R  +LL+V+DD++ + Q   L+G+   FG GSR+++T+RD+ +L +   +EK
Sbjct: 293 INMIRERFRHKRLLVVIDDLDHMKQFNALMGDRTWFGLGSRLIITSRDEHLLAQLEVDEK 352

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
             Y+V  L+  E+ E F   AF++ H   D    S  VV Y  G PL LEVLGS LC + 
Sbjct: 353 --YQVKELDHNESLELFSWHAFRKTHPVGDYVELSNGVVDYGGGLPLALEVLGSYLCKRS 410

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP-RVKSIFLDIACFFEGEDKDFVASI 256
              W   L  L RI     H I   L++SF+ L   +VK IFLDIACFF G D+D+   I
Sbjct: 411 IPEWTSALRKLKRIPH---HQIQRKLRLSFDTLDDDKVKDIFLDIACFFIGTDRDYAVKI 467

Query: 257 LDDSE---SDVLDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           LD         + +LI +SLV++ S N L+MHD+L++MGR+IVR+ S  +PGKRSRLW  
Sbjct: 468 LDGCGFFPEIGISVLIQRSLVTVDSKNKLSMHDLLRDMGREIVRELSPNQPGKRSRLWFQ 527

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
           +++  VL + KGT+A+EG+ LD+   +   L   +F NM  LRL K              
Sbjct: 528 EDVLDVLSNQKGTEAVEGLVLDVESSRDAVLSTESFANMRYLRLLKI------------- 574

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
                    +KV L    ++L K+LR+L W + PL+ LP NF+  NLV L+++ S +++ 
Sbjct: 575 ---------NKVHLTGCYEHLSKELRWLCWHSCPLKFLPHNFQLDNLVILDMQYSNIKEV 625

Query: 433 WE 434
           W+
Sbjct: 626 WK 627


>gi|356542387|ref|XP_003539648.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1069

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 201/650 (30%), Positives = 322/650 (49%), Gaps = 75/650 (11%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG-GLEHLQKQ 60
           + S  V ++GIWGMGG GKTT+AK I++Q    F G  F+ ++R   ET G G  HLQ+Q
Sbjct: 211 NQSTKVCMIGIWGMGGSGKTTIAKFIYNQIHSRFPGKSFIENIRKVCETDGRGHAHLQEQ 270

Query: 61  MLSTTLSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           +L+  L  K+++    +     ++R+   ++LIVLDDVNE  QLK L G     G GS I
Sbjct: 271 LLTDVLKTKVKIHSVGMGTSMIEKRLSGKEVLIVLDDVNEFDQLKDLCGNRKWIGLGSVI 330

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TTRD+ +L     +   +Y++  +   EA E F   AF++    E+ N  +R+VV+Y 
Sbjct: 331 IITTRDRGLLNILNVD--YVYKMEEMNENEALELFSWHAFRKAEPREEFNELARNVVAYC 388

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIF 238
            G PL LEVLGS L  + +  W  +L  L  I  +++      L+ISF+ L  ++ K IF
Sbjct: 389 GGLPLALEVLGSYLIERTEKEWKNLLSKLEIIPNNQVQKK---LRISFDGLHDQMEKDIF 445

Query: 239 LDIACFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSI-SGNFLNMHDILQEMGRQI 294
           LD+ CFF G+DK +V  IL+     +D+ + +LI++SL+ +   N L MH ++++MGR+I
Sbjct: 446 LDVCCFFIGKDKAYVTEILNGCGLHADIGITVLIERSLIIVEKNNKLGMHQLVRDMGREI 505

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           +R+   KEPGKRSRLW  K++  VL  N GT+A+EG+ L L           AF  M  L
Sbjct: 506 IRESLTKEPGKRSRLWFHKDVIDVLTKNTGTEAVEGLALKLHLTSRDCFKADAFEEMKRL 565

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL K                          Q+        K+LR+++W  +PL+ +P  F
Sbjct: 566 RLLKL----------------------DHAQVTGDYGNFSKQLRWINWQGFPLKYIPKTF 603

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             + ++ ++L+ S +   W                      K  Q L             
Sbjct: 604 YLEGVIAIDLKHSNLRLFW----------------------KESQVLGQLK--------- 632

Query: 475 TINFSYCVNLIEFPQISG--KVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
            +N S+   L E P  S   K+  L L     + +V  SI  L +L +++   C  L  +
Sbjct: 633 MLNLSHSKYLTETPDFSKLPKLENLILKDCPRLCKVHKSIGDLHNLLLINWTDCTSLGNL 692

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
                +L+S+ TLIL GCL ++   E + +ME L  + ++ T + ++P S      +  +
Sbjct: 693 PRRAYELKSVKTLILSGCLKIDKLEENIMQMESLTTLIAENTAVKKVPFSVVRSKSIGYI 752

Query: 592 FVEDCSKL--DNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
            V     L  D  P  I     L ++    + +S++P  + +S+ +  +D
Sbjct: 753 SVGGFKGLAHDVFPSII-----LSWMSPTMNPLSRIPPFLGISSSIVRMD 797



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 10/226 (4%)

Query: 512 ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YS 570
           + L  L++L+L   K L   +  F KL  L  LIL  C  L    + +  + +L  I ++
Sbjct: 626 QVLGQLKMLNLSHSKYLTE-TPDFSKLPKLENLILKDCPRLCKVHKSIGDLHNLLLINWT 684

Query: 571 DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA 630
           D T +  LP     L  ++ L +  C K+D L +NI  +E L  ++A  +A+ ++P SV 
Sbjct: 685 DCTSLGNLPRRAYELKSVKTLILSGCLKIDKLEENIMQMESLTTLIAENTAVKKVPFSVV 744

Query: 631 LSNMLRSLDSSHCKGL--ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYL 688
            S  +  +     KGL  + FP   L  +S       +   +  IP  +   SS+  + +
Sbjct: 745 RSKSIGYISVGGFKGLAHDVFPSIILSWMSP------TMNPLSRIPPFLGISSSIVRMDM 798

Query: 689 SGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID 734
             +N   L  +   +S LR + ++     Q   +L   L  LH ++
Sbjct: 799 QNSNLGDLAPMFSSLSNLRSVLVQCDTESQLSKQLRTILDDLHCVN 844


>gi|357499381|ref|XP_003619979.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355494994|gb|AES76197.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1033

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 218/667 (32%), Positives = 336/667 (50%), Gaps = 89/667 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S+D V ++GI G GG+GKTTLA+A+++  +++FE  CF+ +VR NS    GLE+LQ+Q
Sbjct: 215 LGSNDGVCMIGILGTGGMGKTTLAQAVYNLIANQFECKCFLHNVRENS-VKHGLEYLQEQ 273

Query: 61  MLSTTLSEKLEVAGPN--IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS ++  + +    N  IP   K R+ + K+L++LDDV+++ QL+ LIGE    G+GSR
Sbjct: 274 LLSKSIGFETKFGHVNEGIP-IIKRRLYQKKVLLILDDVDKIKQLQVLIGEPGWLGRGSR 332

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRDK +L       KKIY  +GL  E+A E     AFK N      +      V Y
Sbjct: 333 VIITTRDKHLLSCHGI--KKIYEADGLNKEQALELLRMMAFKSNKNDSRYDSILNRAVKY 390

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+GS+L  K  +    +L    RI      DI  ILK+SF+ L    +++F
Sbjct: 391 AAGLPLALEVVGSNLFGKTIAECESLLDKYERIPHE---DIQKILKVSFDALDEEQQNVF 447

Query: 239 LDIACFFEGEDKDFVASILDDSES----DVLDILIDKSLVSISGNF---LNMHDILQEMG 291
           LDI C F+G  ++++ ++L D         L +L+DKSL+ I  N+   + +HD++++MG
Sbjct: 448 LDIVCVFKGHPEEYIQNLLHDHYGYCIKSHLRVLVDKSLIKIKANYYCGVTLHDLIEDMG 507

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGI-NLDPRAFTN 350
            +I+RQES +EPG+RSRLW   +I  VL+ N GT  IE I+LD S  K +  ++   F  
Sbjct: 508 IEIIRQESIREPGERSRLWSRDDIVHVLQENTGTSKIEMIYLDRSIAKHLRGMNEMVFKK 567

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M+NL+              + S +  E  ++SK     G  YLP  LR L  +     +L
Sbjct: 568 MTNLKTL-----------HIQSYAFTEGPNFSK-----GPKYLPSSLRILECNGCTSESL 611

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSAL-SFKGCQSLRSFPSNLH 469
            S F  K     N++                 ++ N  YL+ +    G  +L++F     
Sbjct: 612 SSCFSNKKKFN-NMKI---------------LTLDNSDYLTHIPDVSGLPNLKNF----- 650

Query: 470 FVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
                  +F  CV LI                     + +S+  L  L++L+   C++L+
Sbjct: 651 -------SFQGCVRLI--------------------TIHNSVGYLNKLKILNAEYCEQLE 683

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
              +   +L SL  L L  C +L+ FPE+L KM ++K I    T I ELP SF NL  L 
Sbjct: 684 SFPS--LQLPSLEELKLSECESLKSFPELLCKMTNIKEITIYETSIGELPFSFGNLSELR 741

Query: 590 VLFV-EDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
            L +  D  K+  LP+ +    +L  ++        L     +   L  L +  C+ L S
Sbjct: 742 RLIIFSDNFKI--LPECLSECHHLVEVI--VDGCYSLEEIRGIPPNLERLSAVDCESLSS 797

Query: 649 FPRTFLL 655
             R  LL
Sbjct: 798 ASRRMLL 804



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 136/319 (42%), Gaps = 32/319 (10%)

Query: 638 LDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP---QEIAYL-SSLEILYLSGNNF 693
           LD S  K L          ++ +  LHI  YA  E P   +   YL SSL IL  +G   
Sbjct: 549 LDRSIAKHLRGMNEMVFKKMTNLKTLHIQSYAFTEGPNFSKGPKYLPSSLRILECNGCTS 608

Query: 694 ESLPAII---KQMSQLRFIHLEDFNMLQSLPE---LPLCLKYLHLIDCKMLQSLPVLPFC 747
           ESL +     K+ + ++ + L++ + L  +P+   LP  LK      C  L ++      
Sbjct: 609 ESLSSCFSNKKKFNNMKILTLDNSDYLTHIPDVSGLP-NLKNFSFQGCVRLITIHNSVGY 667

Query: 748 LESLDLTG---CNMLRSLPELPL-CLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQ- 802
           L  L +     C  L S P L L  L+ L L +C  L+S PEL LC ++  ++     + 
Sbjct: 668 LNKLKILNAEYCEQLESFPSLQLPSLEELKLSECESLKSFPEL-LC-KMTNIKEITIYET 725

Query: 803 SLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFT--NCLKLNGKANNKIL 860
           S+ E+      L  S L +L   S + +  PE L       E     C  L      + +
Sbjct: 726 SIGELPFSFGNL--SELRRLIIFSDNFKILPECLSECHHLVEVIVDGCYSLE---EIRGI 780

Query: 861 ADSLLRIRHMAIASLR-LGYEMAINEKLSELRGSLIVLPGSE--IPDWFSNQSSGSSICI 917
             +L R+  +   SL      M +++KL++   + I  P     IPDWF +Q+ G +I  
Sbjct: 781 PPNLERLSAVDCESLSSASRRMLLSQKLNKAGCTYIHFPNKTEGIPDWFEHQTRGDTISF 840

Query: 918 QLP---PHSSCRNLI-GFA 932
                 P  +C  LI GFA
Sbjct: 841 WFRRKIPSITCIFLISGFA 859



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 5/187 (2%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALS-N 633
           +T +P     LP L+    + C +L  + +++G L  L   +  A    QL S  +L   
Sbjct: 635 LTHIPD-VSGLPNLKNFSFQGCVRLITIHNSVGYLNKLK--ILNAEYCEQLESFPSLQLP 691

Query: 634 MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF 693
            L  L  S C+ L+SFP   L  ++ +  + I + ++ E+P     LS L  L +  +NF
Sbjct: 692 SLEELKLSECESLKSFPE-LLCKMTNIKEITIYETSIGELPFSFGNLSELRRLIIFSDNF 750

Query: 694 ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDL 753
           + LP  + +   L  + ++    L+ +  +P  L+ L  +DC+ L S        + L+ 
Sbjct: 751 KILPECLSECHHLVEVIVDGCYSLEEIRGIPPNLERLSAVDCESLSSASRRMLLSQKLNK 810

Query: 754 TGCNMLR 760
            GC  + 
Sbjct: 811 AGCTYIH 817


>gi|227438127|gb|ACP30553.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1290

 Score =  270 bits (691), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 235/763 (30%), Positives = 366/763 (47%), Gaps = 93/763 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+  ++VGI G  GIGKTT+A+A+F Q S  F    F++  R   +  G     +++ LS
Sbjct: 200 SEEARMVGIVGPSGIGKTTIARALFSQLSSRFHYRAFLAYRRTIQDDYGMKLCWEERFLS 259

Query: 64  TTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
             L +K L++    +    K+R++  K+LI LDDV++V  LK L+G    FG GSRI+V 
Sbjct: 260 EILCQKELKICYLGV---VKQRLKLKKVLIFLDDVDDVELLKTLVGRTKWFGSGSRIIVI 316

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           ++D+++L+    +   +Y+V     + A +  C  AF +N  P      +  V       
Sbjct: 317 SQDRQLLKAH--DIDLVYKVEFPSEDVALKMLCRSAFGQNSPPNGFMELAVEVAKLAGNL 374

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L VLGSSL  + K  W K++  L    + ++      L++S+++L  + + +FL IA
Sbjct: 375 PLGLNVLGSSLRGRGKDEWMKMMPRLRNYLDGKVEKT---LRVSYDRLDGKDQELFLFIA 431

Query: 243 C--FFEGEDKDFVASILDDSESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIVRQES 299
               F G    ++  +L DS +  L  L DKSL+ I+ N  + MH++L ++ R+I R ES
Sbjct: 432 FARLFNGVQVSYIKDLLGDSVNTGLKTLADKSLIRITSNETIEMHNLLHKLAREIFRAES 491

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLFK 358
              PGKR  L D ++I  V     GT+ + G++ +  K++   ++D ++F  M NL   +
Sbjct: 492 INNPGKRRFLVDVEDIRDVFTDKTGTETVLGLYFNALKLEEPFSMDEKSFEGMCNL---Q 548

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
           F + + Y    +P           K+ LP GL YLP+KLR L WD YP + LPSNFK + 
Sbjct: 549 FLIVRDYVGYWVPQ---------GKLHLPQGLFYLPRKLRLLRWDGYPSKCLPSNFKAEY 599

Query: 419 LVELNLRCSKVEQPWEG---------------------------------------EKAC 439
           LVEL ++ S +E+ WEG                                           
Sbjct: 600 LVELRMKNSSLEKLWEGTLPLGRLKKLIMSWSTYLKELPDLSNAKSLEEVYLDRCTSLVT 659

Query: 440 VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
            PSSIQN   L  L  +GC  L SFP+ ++      +N   C  L  FPQI       Y+
Sbjct: 660 FPSSIQNLHKLRELDLEGCTELESFPTLINLKSLEYLNLRECSRLRNFPQI-------YI 712

Query: 500 GQSAIEEVPSSIE-CL--TDLEVLDLRGCKRLKRISTSFCKLR--SLVTLILLGCLNLEH 554
             S  +     +E C    +L  LD  GC     +    CK R   L+ L +   + LE 
Sbjct: 713 NSS--QGFSLEVEGCFWNNNLCGLDYLGCI----MRCIPCKFRPEQLIGLTVKSNM-LER 765

Query: 555 FPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
             E ++ +  L+ +  S    +TE+P      P L  L + +C  L  +P  IGSL  L 
Sbjct: 766 LWEGVQCLGSLEMMDVSSCENLTEIP-DLSMAPNLMYLRLNNCKSLVTVPSTIGSLCKLV 824

Query: 614 YI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
            + +   + +  LP+ V LS+ LR+L  S C  L SFP+       ++  L+++D A+ E
Sbjct: 825 GLEMKECTMLEVLPTDVNLSS-LRTLYLSGCSRLRSFPQIS----RSIASLYLNDTAIEE 879

Query: 673 IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN 715
           +P  I     L  L +SG   + L  I     +LR +HL DF+
Sbjct: 880 VPCCIENFWRLSELSMSG--CKRLKNISPNFFRLRSLHLVDFS 920



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 190/466 (40%), Gaps = 108/466 (23%)

Query: 538  LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR-TPITELPSSFENLPGLEVLFVEDC 596
            L  L  LI+     L+  P+ L   + L+ +Y DR T +   PSS +NL  L  L +E C
Sbjct: 620  LGRLKKLIMSWSTYLKELPD-LSNAKSLEEVYLDRCTSLVTFPSSIQNLHKLRELDLEGC 678

Query: 597  SKLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
            ++L++ P   N+ SLEYL   L   S +   P     S+   SL+   C     F    L
Sbjct: 679  TELESFPTLINLKSLEYLN--LRECSRLRNFPQIYINSSQGFSLEVEGC-----FWNNNL 731

Query: 655  LGLSAMGL----------------LHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLP 697
             GL  +G                 L +    +  + + +  L SLE++ +S   N   +P
Sbjct: 732  CGLDYLGCIMRCIPCKFRPEQLIGLTVKSNMLERLWEGVQCLGSLEMMDVSSCENLTEIP 791

Query: 698  AIIKQMSQLRFIHLEDFNMLQSLPEL--PLC-LKYLHLIDCKMLQSLP--VLPFCLESLD 752
             +      L ++ L +   L ++P     LC L  L + +C ML+ LP  V    L +L 
Sbjct: 792  DL-SMAPNLMYLRLNNCKSLVTVPSTIGSLCKLVGLEMKECTMLEVLPTDVNLSSLRTLY 850

Query: 753  LTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLC------LQLLTVRNCNRLQSLPE 806
            L+GC+ LRS P++   +  L L D     ++ E+P C      L  L++  C RL+++  
Sbjct: 851  LSGCSRLRSFPQISRSIASLYLNDT----AIEEVPCCIENFWRLSELSMSGCKRLKNISP 906

Query: 807  ILLCLQEL----------------DASVLEKLS------------------KHSPDLQWA 832
                L+ L                DAS+  K+S                  K   D+ WA
Sbjct: 907  NFFRLRSLHLVDFSDCGEVITVLSDASIKAKMSIEDHFSLIPLFENTEERYKDGADIDWA 966

Query: 833  PESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRG 892
              S     +   F NC KL+  A   I+   +                            
Sbjct: 967  GVSRNFEFL--NFNNCFKLDRDARELIIRSYM---------------------------- 996

Query: 893  SLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLD 938
               VLPG E+P +F++++SG+S+ + LP  S  ++ +GF  C  ++
Sbjct: 997  KPTVLPGGEVPTYFTHRASGNSLAVTLPQSSLSQDFLGFKACIAVE 1042


>gi|297794807|ref|XP_002865288.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311123|gb|EFH41547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1337

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 207/680 (30%), Positives = 320/680 (47%), Gaps = 117/680 (17%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ VGIWGM GIGKTTLAKA+FDQ S EF+ SCF+ D     +  G    L++Q     L
Sbjct: 167 IRCVGIWGMPGIGKTTLAKAVFDQMSGEFDASCFIEDYSKAIQEKGVYCLLEEQF----L 222

Query: 67  SEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            E    AG  +   +  ++++   ++L+VLDDV     ++  +G  D FG  S I++T+R
Sbjct: 223 KENAGGAGGTVTKLSLLRDKLNNKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITSR 282

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           DK V    R    +IY V+GL  +EA + F   A  ++   ++L+  S  V+ Y  G+PL
Sbjct: 283 DKSVFRLCR--VNQIYEVHGLNEKEALQLFSMCASIDDMAEQNLHEVSMKVIKYANGHPL 340

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L + G    LK K    ++     ++ E   +   D +K  ++ L  R K IFLDIACF
Sbjct: 341 ALSLYGRE--LKGKKRPPEMETAFLQLKERPPNIFVDAIKSCYDTLNDREKDIFLDIACF 398

Query: 245 FEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F+GE+ D+V  +L+         +D+L++K +                 GR I+ +E+ +
Sbjct: 399 FQGENVDYVMQVLEGCGFFPHVGIDVLVEKYV-----------------GRHIINRET-R 440

Query: 302 EPGKRSRLWDPKEISRVLKHN---------------KGTDAIEGIFLDLSKIKGINLDPR 346
           +  +R RLW+P  I  +L+ N               +G + IEG+FLD S     ++ P 
Sbjct: 441 QTKRRDRLWEPWSIKYLLEDNGEKENGEHKTTLERAQGPEEIEGMFLDTSNF-SFDIKPA 499

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           AF NM NLRL K Y             S+  ++ + K  L   L+ LP +LR LHW+ YP
Sbjct: 500 AFDNMLNLRLLKIY-------------SSNPEVHHVKNFLKGFLNSLPNELRLLHWENYP 546

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA---------CVPSSIQNF------KYLS 451
           L+ LP NF P +LVE+N+  S++++ W G K          C    + +       + L 
Sbjct: 547 LQFLPQNFDPIHLVEINMPYSQLKKLWGGTKNLEMLKTIRLCHSQQLVDIDDVLKAQNLE 606

Query: 452 ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSI 511
            +  +GC  L+SFP+    +    +N S C  +  FP+I   +  L L  + I E+P SI
Sbjct: 607 VIDLQGCTRLQSFPATGQLLHLRIVNLSGCTEIKSFPEIPPNIETLNLQGTGIIELPLSI 666

Query: 512 ------------------ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
                               +++LE  DL+    L ++STS   L  L+ L L  C  L 
Sbjct: 667 IKPNYTELLNLLAEIPGLSGVSNLEQSDLKPLTSLMKMSTSNQNLGKLICLELKDCARLR 726

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
             P                        +  NL  L+VL +  CS+L+ +     +L+ LY
Sbjct: 727 SLP------------------------NMNNLELLKVLDLSGCSELETIQGFPQNLKELY 762

Query: 614 YILAAASAISQLPSSVALSN 633
               A   + QLP S+ L N
Sbjct: 763 LAGTAVRQVPQLPQSLELFN 782



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 9/112 (8%)

Query: 221  DILKISFNKLTPRVKSIFLDIACFFEGEDKDFVA----SILDDSESDVLDILIDKSLVSI 276
            ++L++S++ L    K++FL +A  F  ED D VA    +I+D   S  L +L D+SL+ +
Sbjct: 1018 EVLRVSYDGLQEIDKALFLYLAGLFNDEDIDLVAPLIANIIDMDVSYGLKVLADRSLIRV 1077

Query: 277  SGNF-LNMHDILQEMGRQIVRQESEKE----PGKRSRLWDPKEISRVLKHNK 323
            S N  + M+++ +EMG++I+  ES+K        +S + D KEI      N+
Sbjct: 1078 SSNGEIVMYNLQREMGKEILHTESKKTDRLVDNIQSSMIDSKEIEITHSKNR 1129



 Score = 45.4 bits (106), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 30/225 (13%)

Query: 646 LESFPRTFLLGL-SAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
           +++F + FL  L + + LLH  +Y ++ +PQ    +  +EI  +  +  + L    K + 
Sbjct: 522 VKNFLKGFLNSLPNELRLLHWENYPLQFLPQNFDPIHLVEI-NMPYSQLKKLWGGTKNLE 580

Query: 705 QLRFIHLEDFNMLQSLPELPLCLKYLHLID---CKMLQSLPVLP--FCLESLDLTGCNML 759
            L+ I L     L  + ++ L  + L +ID   C  LQS P       L  ++L+GC  +
Sbjct: 581 MLKTIRLCHSQQLVDIDDV-LKAQNLEVIDLQGCTRLQSFPATGQLLHLRIVNLSGCTEI 639

Query: 760 RSLPELPLCLQYLNLEDCNMLRSLPELPLCL------QLLTVRNCNRLQSLPEI--LLCL 811
           +S PE+P  ++ LNL+   ++    ELPL +      +LL     N L  +P +  +  L
Sbjct: 640 KSFPEIPPNIETLNLQGTGII----ELPLSIIKPNYTELL-----NLLAEIPGLSGVSNL 690

Query: 812 QELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKAN 856
           ++ D   L  L K S   Q          IC E  +C +L    N
Sbjct: 691 EQSDLKPLTSLMKMSTSNQNL-----GKLICLELKDCARLRSLPN 730


>gi|356506545|ref|XP_003522040.1| PREDICTED: probable WRKY transcription factor 19-like [Glycine max]
          Length = 1024

 Score =  270 bits (690), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 228/653 (34%), Positives = 321/653 (49%), Gaps = 84/653 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEV-AGPNIP 78
           KTT+A+ +F +   E+E  CF ++V+      G +  L++++ ++ L + + +     + 
Sbjct: 203 KTTIAQEVFSKLYLEYESCCFFANVKEEIRRLGVIS-LKEKLFASILQKYVNIKTQKGLS 261

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K+ + + K+LIVLDDVN+  QL+ L G  D +G GSRI++TTRD +VL     +  +
Sbjct: 262 SSIKKMIGQKKVLIVLDDVNDSEQLEELFGTPDWYGSGSRIIITTRDIKVL--IANKVPE 319

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY V GL   EAF+ F   AF +     +    S+ VV Y KG PLVL++L   LC K K
Sbjct: 320 IYHVGGLSSCEAFQLFKLNAFNQGDLEMEFYELSKRVVDYAKGIPLVLKILAHLLCGKDK 379

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDK-------- 250
             W   L  L  I  + +HD    +K+SF+ L    + I LD+ACF    +         
Sbjct: 380 EVWKSQLEKLKGIKSNNVHDF---VKLSFDDLHHEEQEILLDLACFCRRANMTENFNMKV 436

Query: 251 DFVASILDDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPG 304
           D +  +L D  S       L+ L +KSL++IS  N ++MHD +QEM  +IV QES  + G
Sbjct: 437 DSINILLGDCGSHNAVVVGLERLKEKSLITISEDNVVSMHDTVQEMAWEIVCQES-NDLG 495

Query: 305 KRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKF 364
            RSRLWDP EI  VLK++KGT AI  I   LS +K + L P AF  MSNL+   F     
Sbjct: 496 NRSRLWDPIEIYDVLKNDKGTKAIRSITTPLSTLKNLKLRPDAFVRMSNLQFLDF----- 550

Query: 365 YEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNL 424
                            +   LP GL  LP +LRYLHW  YPL  LP  F  + LV L+L
Sbjct: 551 ---------------GNNSPSLPQGLQSLPNELRYLHWMHYPLTCLPEQFSAEKLVILDL 595

Query: 425 RCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNL 484
            CS+VE+ W          ++N   L  +  + C  L   P           +FS   NL
Sbjct: 596 SCSRVEKLWH--------EVKNLVNLKNVKLRWCVLLNELP-----------DFSKSTNL 636

Query: 485 IEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
                   KV  +    S +  V  SI  L  LE LDL GC  L + S+    L SL+ L
Sbjct: 637 --------KVLDVSCS-SGLTSVHPSIFSLHKLEKLDLSGCSSLIKFSSDDGHLSSLLYL 687

Query: 545 ILLGCLNLEHFPEILEKMEHLKRIYSDRTP--ITELPSSFENLPGLEVLFVEDCSKLDNL 602
            L  C  L  F    E +  L     D T   I+ LP SF +L  LE+L +   S +++L
Sbjct: 688 NLSDCEELREFSVTAENVVEL-----DLTGILISSLPLSFGSLRKLEMLHLIR-SDIESL 741

Query: 603 PDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLES--FPRT 652
           P  I +L  L Y+ L+  S +  LP    L   L +L +  C+ LE+  FP T
Sbjct: 742 PTCINNLTRLRYLDLSCCSNLCILPK---LPPSLETLHADECESLETVLFPST 791



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 20/187 (10%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           + +L    +NL  L+ + +  C  L+ LPD   S       ++ +S ++ +  S+   + 
Sbjct: 600 VEKLWHEVKNLVNLKNVKLRWCVLLNELPDFSKSTNLKVLDVSCSSGLTSVHPSIFSLHK 659

Query: 635 LRSLDSSHCKGLESFP--------------------RTFLLGLSAMGLLHISDYAVREIP 674
           L  LD S C  L  F                     R F +    +  L ++   +  +P
Sbjct: 660 LEKLDLSGCSSLIKFSSDDGHLSSLLYLNLSDCEELREFSVTAENVVELDLTGILISSLP 719

Query: 675 QEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID 734
                L  LE+L+L  ++ ESLP  I  +++LR++ L   + L  LP+LP  L+ LH  +
Sbjct: 720 LSFGSLRKLEMLHLIRSDIESLPTCINNLTRLRYLDLSCCSNLCILPKLPPSLETLHADE 779

Query: 735 CKMLQSL 741
           C+ L+++
Sbjct: 780 CESLETV 786



 Score = 44.3 bits (103), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 39/247 (15%)

Query: 734 DCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYL-NLEDCNMLRS-LPELPLCLQ 791
           DC+ L+   V    +  LDLTG      +  LPL    L  LE  +++RS +  LP C+ 
Sbjct: 691 DCEELREFSVTAENVVELDLTGI----LISSLPLSFGSLRKLEMLHLIRSDIESLPTCIN 746

Query: 792 LLT------VRNCNRLQSLPEILLCLQELDASVLEKLSK---HSPDLQWAPESLKSAAIC 842
            LT      +  C+ L  LP++   L+ L A   E L      S  ++   E+ K     
Sbjct: 747 NLTRLRYLDLSCCSNLCILPKLPPSLETLHADECESLETVLFPSTAVEQFEENRKRV--- 803

Query: 843 FEFTNCLKLNGKANNKILADSLLRIRHMAIASLR---LGYEMAINE--KLSELRGSLIVL 897
            EF N LKL+  +   I  ++ + +   A   L    L +    N+   L +   ++ + 
Sbjct: 804 -EFWNYLKLDEFSLMAIELNAQINVMKFAYQHLSAPILDHVENYNDYKDLHDSYQAVYMY 862

Query: 898 PGSEIPDWFSNQSSGSSICIQL----PPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVS 953
           PGS +P+W + ++    + I L    P H      +GF FC +L     D D   +   +
Sbjct: 863 PGSNVPEWLAYKTRKDYVIIDLSSAPPAH------LGFIFCFIL-----DKDTEEFLDPA 911

Query: 954 FQFDLEI 960
            QF + I
Sbjct: 912 LQFSISI 918


>gi|357500091|ref|XP_003620334.1| Sucrose synthase [Medicago truncatula]
 gi|355495349|gb|AES76552.1| Sucrose synthase [Medicago truncatula]
          Length = 1319

 Score =  270 bits (689), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 218/651 (33%), Positives = 320/651 (49%), Gaps = 71/651 (10%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S D V +VG++G GG+GK+TL KAI++  S +FE SCF+ +VR NS  +  L+HLQ+++L
Sbjct: 214 SDDGVHMVGLYGTGGLGKSTLGKAIYNFISDQFECSCFLENVRENS-ASNKLKHLQEELL 272

Query: 63  STTLSEKLEVAG--PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             TL +K ++      IP + KER+   K L++LDDV+++ QL  L G  D FG+GSR++
Sbjct: 273 LKTLQQKTKLGSVSEGIP-YIKERLHTKKTLLILDDVDDMKQLHALAGGPDWFGRGSRVI 331

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK +L       K  + V GL   EA E     AFK N  P          VSY  
Sbjct: 332 ITTRDKHLLRSHG--IKSTHEVKGLYGTEALELLRWMAFKNNKVPSSYEDVLNRAVSYAS 389

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PLVLE++GS+L  K    W   L    +I   +IH+I   LK+S++ L    +S+FLD
Sbjct: 390 GLPLVLEIVGSNLFGKTIEEWKGTLDGYEKIPNKKIHEI---LKVSYDALEEEQQSVFLD 446

Query: 241 IACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISG-------NFLNMHDILQE 289
           IAC F+G    E +D + +         L +L +KSLV IS        N + +HD +++
Sbjct: 447 IACCFKGCGWKEFEDILRAHYGHCIKHHLGVLAEKSLVKISSTSYSGSINHVTLHDFIED 506

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL-SKIKGINLDPRAF 348
           MG+++VRQES KEPG+RSRLW   +I  VLK N GT  IE I+++  S+   I+   +AF
Sbjct: 507 MGKEVVRQESPKEPGERSRLWCQDDIVNVLKENTGTRKIEMIYMNFPSEEFVIDKKGKAF 566

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M+ L+                       L    V    GL YLP  LR L        
Sbjct: 567 KKMTRLK----------------------TLIIENVHFSKGLKYLPSSLRVLKLRGCLSE 604

Query: 409 TLPSNFKPKNLVELNL----RC---------------SKVEQPWEGEKACVPSSIQNFKY 449
           +L S    K    + +    RC                K    +      + +SI +   
Sbjct: 605 SLLSCSLSKKFQNMKILTLDRCEYLTHIPDVSGLQNLEKFSFEYCENLITIHNSIGHLNK 664

Query: 450 LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL---YLGQSAIEE 506
           L  LS  GC  L  FP  L       +N SYC +L  FP++  K+T +   +L +++I E
Sbjct: 665 LERLSANGCSKLERFPP-LGLASLNELNISYCESLKSFPKLLCKMTNMKTIWLQKTSIRE 723

Query: 507 VPSSIECLTDLEVLDLRGCKRL---KRISTSFCKLRSLVT-LILLGC-LNLEHFPEILEK 561
           +PSS + L +L  L L  C  L   K+    +  + S VT L+L  C L+ E  P  L+ 
Sbjct: 724 LPSSFQNLNELFQLTLWECGMLRFPKQNDQMYSIVFSKVTNLVLNNCKLSDECLPIFLKW 783

Query: 562 MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
             ++K +   R     +P        L  L +++C  L+ +     +LE L
Sbjct: 784 CVNVKLLDLSRNNFKLIPECLSECHLLNNLILDNCKSLEEIRGIAPNLERL 834



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 100/252 (39%), Gaps = 32/252 (12%)

Query: 511 IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYS 570
           +  L +LE      C+ L  I  S   L  L  L   GC  LE FP +            
Sbjct: 635 VSGLQNLEKFSFEYCENLITIHNSIGHLNKLERLSANGCSKLERFPPL------------ 682

Query: 571 DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA 630
                         L  L  L +  C  L + P  +  +  +  I    ++I +LPSS  
Sbjct: 683 -------------GLASLNELNISYCESLKSFPKLLCKMTNMKTIWLQKTSIRELPSSFQ 729

Query: 631 LSNMLRSLDSSHCKGLESFPRT----FLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLE 684
             N L  L    C G+  FP+     + +  S +  L +++  + +  +P  + +  +++
Sbjct: 730 NLNELFQLTLWEC-GMLRFPKQNDQMYSIVFSKVTNLVLNNCKLSDECLPIFLKWCVNVK 788

Query: 685 ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
           +L LS NNF+ +P  + +   L  + L++   L+ +  +   L+ L  + CK L S    
Sbjct: 789 LLDLSRNNFKLIPECLSECHLLNNLILDNCKSLEEIRGIAPNLERLSAMGCKSLSSSSRR 848

Query: 745 PFCLESLDLTGC 756
               + L+  GC
Sbjct: 849 MLLSQKLNEAGC 860


>gi|357499249|ref|XP_003619913.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494928|gb|AES76131.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1018

 Score =  270 bits (689), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 199/608 (32%), Positives = 293/608 (48%), Gaps = 95/608 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           M S D V +VG++G GG+GK+TLAKA+++  + +FEG CF+ +VR  S T   L+HLQK+
Sbjct: 202 MGSEDVVHMVGLYGTGGMGKSTLAKAVYNFVADQFEGVCFLHNVR-ESSTLKNLKHLQKK 260

Query: 61  MLS--TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS       KLE     IP   KER+ R K+L++LDDV+++ QL+ L G LD FG GSR
Sbjct: 261 LLSKIVKFDGKLEDVSEGIP-IIKERLSRKKILLILDDVDKLEQLEALAGGLDWFGHGSR 319

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRDK +L          + V  L   EA E     AFK +  P         VV+Y
Sbjct: 320 VIITTRDKHLLACHG--ITSTHAVEELNETEALELLRRMAFKNDKVPSTYEEILNRVVTY 377

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL +  +G +L  ++   W ++L +   I      DI  IL++S++ L P+ KS+F
Sbjct: 378 ASGLPLAIVTIGDNLFGRKVEDWKRILDEYENIPNK---DIQRILQVSYDALEPKEKSVF 434

Query: 239 LDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNF-----LNMHDILQE 289
           LDIAC F+G     V  IL       ++    +L +KSL+   G++     + +HD++++
Sbjct: 435 LDIACCFKGCKWTKVKKILHAHYGHCIEHHVGVLAEKSLI---GHWEYDTQMTLHDLIED 491

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS-KIKGINLDPRAF 348
           MG++IVRQES K PG+RSRLW   +I  VL+ N GT+ IE I+L      +    D  AF
Sbjct: 492 MGKEIVRQESPKNPGERSRLWFHDDIFDVLRDNTGTENIEMIYLKYGLTARETEWDGMAF 551

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M+NL+                       L     +   G  YLP  LRYL W  Y  +
Sbjct: 552 NKMTNLK----------------------TLIIDDYKFSGGPGYLPSSLRYLEWIDYDFK 589

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
           +L                           +C+ S  + F Y+  L       L   P   
Sbjct: 590 SL---------------------------SCILS--KEFNYMKVLKLDYSSDLTHIPDVS 620

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
                   +F +C +LI                     + SSI  L  LE+L+  GC +L
Sbjct: 621 GLPNLEKCSFQFCFSLI--------------------TIHSSIGHLNKLEILNAYGCSKL 660

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
           +       +L SL    +  C +L++FPE+L KM ++K I      I ELP SF+N   L
Sbjct: 661 EHFPP--LQLPSLKKFEISKCESLKNFPELLCKMRNIKDIKIYAISIEELPYSFQNFSEL 718

Query: 589 EVLFVEDC 596
           + L +  C
Sbjct: 719 QRLKISRC 726



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 84/366 (22%), Positives = 141/366 (38%), Gaps = 60/366 (16%)

Query: 399 YLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGC 458
           + H D + +    +  +   ++ L    +  E  W+G      + + N K L    +K  
Sbjct: 512 WFHDDIFDVLRDNTGTENIEMIYLKYGLTARETEWDG---MAFNKMTNLKTLIIDDYKFS 568

Query: 459 QSLRSFPSNLHFVCPVTINFSY--CVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTD 516
                 PS+L ++  +  +F    C+   EF  +  KV +L    S +  +P  +  L +
Sbjct: 569 GGPGYLPSSLRYLEWIDYDFKSLSCILSKEFNYM--KVLKLDY-SSDLTHIPD-VSGLPN 624

Query: 517 LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPIT 576
           LE    + C  L  I +S   L  L  L   GC  LEHFP +                  
Sbjct: 625 LEKCSFQFCFSLITIHSSIGHLNKLEILNAYGCSKLEHFPPL------------------ 666

Query: 577 ELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
                   LP L+   +  C  L N P+ +  +  +  I   A +I +LP S    + L+
Sbjct: 667 -------QLPSLKKFEISKCESLKNFPELLCKMRNIKDIKIYAISIEELPYSFQNFSELQ 719

Query: 637 SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN--NFE 694
            L  S C                   L    Y   +    I + S++E + L+GN  + E
Sbjct: 720 RLKISRC------------------YLRFRKYY--DTMNSIVF-SNVEHVDLAGNLLSDE 758

Query: 695 SLPAIIKQMSQLRFIHLE---DFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESL 751
            LP ++K    + F+ L    +F +L        CL++L+L  C  L+ +  +P  LESL
Sbjct: 759 CLPILLKWFVNVTFLDLSCNYNFTILPECLGECHCLRHLNLRFCGALEEIRGIPPNLESL 818

Query: 752 DLTGCN 757
               C+
Sbjct: 819 FADNCD 824



 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 120/296 (40%), Gaps = 36/296 (12%)

Query: 562 MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILA-AAS 620
           M+ LK  YS  + +T +P     LP LE    + C  L  +  +IG L  L  + A   S
Sbjct: 602 MKVLKLDYS--SDLTHIPD-VSGLPNLEKCSFQFCFSLITIHSSIGHLNKLEILNAYGCS 658

Query: 621 AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
            +   P     S  L+  + S C+ L++FP   L  +  +  + I   ++ E+P      
Sbjct: 659 KLEHFPPLQLPS--LKKFEISKCESLKNFPE-LLCKMRNIKDIKIYAISIEELPYSFQNF 715

Query: 681 SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE---LPLCLKY---LHLID 734
           S L+ L +S   +         M+ + F ++E  ++  +L     LP+ LK+   +  +D
Sbjct: 716 SELQRLKIS-RCYLRFRKYYDTMNSIVFSNVEHVDLAGNLLSDECLPILLKWFVNVTFLD 774

Query: 735 CKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLT 794
                +  +LP CL       C+          CL++LNL  C  L  +  +P  L+ L 
Sbjct: 775 LSCNYNFTILPECLGE-----CH----------CLRHLNLRFCGALEEIRGIPPNLESLF 819

Query: 795 VRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDL-----QWAPESLKSAAICFEF 845
             NC+ L S    +L  Q+L  S       H P+       W     +   I F F
Sbjct: 820 ADNCDSLSSSSRRMLMSQKLHESGCTHF--HFPNTTGRIPDWFEHQSRGETISFWF 873


>gi|10177430|dbj|BAB10522.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1055

 Score =  270 bits (689), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 221/656 (33%), Positives = 322/656 (49%), Gaps = 98/656 (14%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V+++GIWG  GIGKTT+A+A+F+Q    F  SCF+ ++  N+  +     L   +LS 
Sbjct: 187 DDVKMIGIWGPAGIGKTTIARALFNQLFTGFRHSCFMGNIDVNNYDSK--LRLHNMLLSK 244

Query: 65  TLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
            L++K       I H    +E +R  ++LIVLDDV+++ QL+ L  E   FG GSR++VT
Sbjct: 245 ILNQK----DMKIHHLGAIEEWLRNQRVLIVLDDVDDLEQLEVLAKESFWFGPGSRVIVT 300

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            +DK++L      +  IY V+    ++A E FC  AFK++   +     +R VV      
Sbjct: 301 LKDKKILMAHGIND--IYHVDYPSQKKALEIFCLSAFKQSSPQDGFEELARKVVELCGNL 358

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L V+GSS   + +  W   L+ +    + +I  +   L++ ++KL  + +S+FL IA
Sbjct: 359 PLALRVVGSSFYGESEDEWRLQLYGIETNLDRKIEHV---LRVGYDKLLEKHQSLFLHIA 415

Query: 243 CFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFL-NMHDILQEMGRQIVRQE 298
           CFF  E  D+V+++L DS  DV   L  L  KSLV IS + L  MH +LQ++GRQ+V Q+
Sbjct: 416 CFFNHESVDYVSTMLADSTLDVENGLKTLAAKSLVHISTHGLVRMHCLLQQLGRQVVVQQ 475

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
           S  EPGKR  L + KEI  VL +             +SKI   ++  R F  M NL+  K
Sbjct: 476 S-GEPGKRQFLVEAKEIRDVLANET-----------MSKIGEFSIRKRVFEGMHNLKFLK 523

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
           FY                       V L   + YLP+ LR LHWD+YP + LP  F+P+ 
Sbjct: 524 FY--------------------NGNVSLLEDMKYLPR-LRLLHWDSYPRKRLPLTFQPEC 562

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
           LVEL L  SK+E+ W G        IQ    L                         IN 
Sbjct: 563 LVELYLVSSKLEKLWGG--------IQPLTNLKK-----------------------INL 591

Query: 479 SYCVNLIEFPQISGKVTRL----YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            Y  NL E P +S K T L      G  ++ E+PSSI  L  LEVLD  GC +L  I T 
Sbjct: 592 EYSSNLKEIPNLS-KATNLETLRLTGCESLMEIPSSISNLHKLEVLDASGCSKLHVIPTK 650

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR-TPITELPSSFENLPGLEVLFV 593
              L SL  + +  C  L  FP+I   +    +I S R T I E P+S     G+ ++  
Sbjct: 651 I-NLSSLKMVGMDDCSRLRSFPDISTNI----KILSIRGTKIKEFPASIVGGLGILLIGS 705

Query: 594 EDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
               +L ++P+++       Y+  + S I  +P  V     L+ L   +C+ L S 
Sbjct: 706 RSLKRLTHVPESVS------YLDLSHSDIKMIPDYVIGLPHLQHLTIGNCRKLVSI 755



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 173/415 (41%), Gaps = 100/415 (24%)

Query: 558 ILEKMEHLKRI---YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
           +LE M++L R+   + D  P   LP +F+    +E+  V   SKL+ L   I  L  L  
Sbjct: 531 LLEDMKYLPRLRLLHWDSYPRKRLPLTFQPECLVELYLVS--SKLEKLWGGIQPLTNLKK 588

Query: 615 I-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
           I L  +S + ++P+    +N L +L  + C+ L                         EI
Sbjct: 589 INLEYSSNLKEIPNLSKATN-LETLRLTGCESL------------------------MEI 623

Query: 674 PQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
           P  I+ L  LE+L  SG +    +P  I  +S L+ + ++D + L+S P++   +K L +
Sbjct: 624 PSSISNLHKLEVLDASGCSKLHVIPTKI-NLSSLKMVGMDDCSRLRSFPDISTNIKILSI 682

Query: 733 IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCL-- 790
              K ++  P        + L G   L+ L  +P  + YL+L   + ++ +P+  + L  
Sbjct: 683 RGTK-IKEFPASIVGGLGILLIGSRSLKRLTHVPESVSYLDLSHSD-IKMIPDYVIGLPH 740

Query: 791 -QLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQ----WAPESLKSAAICF-- 843
            Q LT+ NC +L S+                    HSP L+    +   SL+S    F  
Sbjct: 741 LQHLTIGNCRKLVSI------------------EGHSPSLESIVAYRCISLESMCCSFHR 782

Query: 844 -----EFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLP 898
                EF NCLKL+ ++  +I+  S  RI                           I L 
Sbjct: 783 PILKLEFYNCLKLDNESKRRIILHSGHRI---------------------------IFLT 815

Query: 899 GSEIPDWFSNQSSGSSICIQLPPHSSCRNLIG--FAFCAVLDSKK----VDSDCF 947
           G+E+P  F++Q+ G+SI I L P       +   F  C VL   K     D +CF
Sbjct: 816 GNEVPAQFTHQTRGNSITISLSPGGEESFSVSSRFRACLVLSPSKNSPYSDINCF 870


>gi|15239700|ref|NP_199688.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758876|dbj|BAB09430.1| disease resistance protein [Arabidopsis thaliana]
 gi|332008339|gb|AED95722.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1190

 Score =  269 bits (688), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 290/1008 (28%), Positives = 448/1008 (44%), Gaps = 215/1008 (21%)

Query: 2    DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
            D    V +VGIWGMGGIGKTT+AK +++Q + +F    F+ DV G       L+ +Q+Q+
Sbjct: 203  DFDAEVCMVGIWGMGGIGKTTIAKYLYEQLASQFPAHSFIEDV-GQICKKVDLKCIQQQL 261

Query: 62   LSTTLSEK--LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
            L   LS K    ++  N  +  + R+  +K+L VLD V++V QL  L  E   FG GSRI
Sbjct: 262  LCDILSTKRVALMSIQNGANLIRSRLGTLKVLFVLDGVDKVEQLHALAKEASWFGPGSRI 321

Query: 120  VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
            ++TTRD+R+L+  R   K  Y V  L+ E++ +   N AF     P  L+ + R  +  +
Sbjct: 322  IITTRDRRLLDSCRVTNK--YEVKCLQNEDSLKIVKNIAFA-GGVPT-LDGYERFAIRAS 377

Query: 180  K---GNPLVLEVLGSSL-CLKRKSHWGKVLHDLNRICESEIH-DIYDILKISFNKLTPRV 234
            +   G PL L   GS L        W   +  L    E+  H +I DIL+ S+  L  R 
Sbjct: 378  QLAQGLPLALVAFGSFLRGATSIDEWEDAIDTL----ETAPHQNIMDILRSSYTNLDLRD 433

Query: 235  KSIFLDIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQ 293
            K+IF+ +AC F GE    V+++L +++  +   L +KSL+ IS + ++++H ++++M R+
Sbjct: 434  KTIFIRVACLFNGEPVSRVSTLLSETKRRIKG-LAEKSLIHISKDGYIDIHSLIKQMARE 492

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMS 352
            IV +ES   P ++  LWDP     VL+   GT+ I+G+ L + ++ +  ++D  AF  M 
Sbjct: 493  IVVEESLYIPRQQRILWDPHNSYGVLESKTGTERIQGMTLHMCELPRAASIDGSAFEQME 552

Query: 353  NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            NL   KF+     + E   +++++ ++             LP+ LR LHWD YPL TL  
Sbjct: 553  NLIFLKFF-KHLNDRESKLNINSKNRM------------VLPRSLRLLHWDAYPLTTLLP 599

Query: 413  NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
             F    LVEL+LR S +E  W+G+ + +         L  L   G ++L   P       
Sbjct: 600  TFPLSRLVELHLRYSNLENLWDGKMSLLE--------LRMLDVTGSKNLTKLP------- 644

Query: 473  PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL---- 528
                + S    L E   I+   TRL       E++P +I  L  L+ LD+  C RL    
Sbjct: 645  ----DLSRATKLEEL--IAKGCTRL-------EQIPETIGSLPSLKKLDVSHCDRLINLQ 691

Query: 529  -----------------KRISTSF----CKLRSLVTLILLGCLNLEHFPEILEKMEHLKR 567
                             ++ S SF      L SL +L + G LN      +  K +HL  
Sbjct: 692  MIIGELPALQKRSPGLFRQASLSFPDAVVTLNSLTSLAIHGKLNF-WLSHLRGKADHLCF 750

Query: 568  IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPS 627
                 TP  +     +  P L   F               SL+ + +I    SA      
Sbjct: 751  SSEQWTP-NKFLKQVQKTPKLMSEFY-----------GFKSLDIMQFIYRKDSA------ 792

Query: 628  SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
                        S  C     F     L L+ + L++++   +  IP +I  L  L+ L 
Sbjct: 793  ------------SFQCYSFSDF-----LWLTELNLINLN---IESIPDDIGLLQVLQKLD 832

Query: 688  LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPV---- 743
            LSGN+F  LP  ++ +S ++ + L +   LQ+LP+LP  L+ L L +C +LQS P+    
Sbjct: 833  LSGNDFTCLPTDMENLSSMKSLRLCNCLKLQTLPKLPQ-LETLKLSNCILLQS-PLGHSA 890

Query: 744  --------------LPFC---------------LESLDLTGCNMLRSLPELPLCLQYLN- 773
                          L  C               L  LDL+G +M+ ++P     L+ LN 
Sbjct: 891  ARKDERGYRLAELWLDNCNDVFELSYTFSHCTNLTYLDLSGNDMV-TMPVTIRFLRLLNT 949

Query: 774  --LEDCNMLRSLPELPLCLQLLTVRNCNRLQ--SLPEILLCLQELDASVLEKLSKHSPDL 829
              L DC  L+S+ +LP  L  L  R C  L+   LP        LD S+     KH  DL
Sbjct: 950  LCLNDCKKLKSMVQLPPNLTSLYARGCTSLEIIHLP--------LDHSI-----KHV-DL 995

Query: 830  QWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSE 889
             + P                KLN  AN   L D  LR           G +  + ++ + 
Sbjct: 996  SYCP----------------KLNEVAN---LMDRFLRC----------GRKEEVPQRFA- 1025

Query: 890  LRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
                   L GS +P +F  Q+   S  I +PP       +GF  C ++
Sbjct: 1026 ------CLSGSRVPIYFDYQAREYSREISIPPIWHASEFVGFDACIII 1067


>gi|297811961|ref|XP_002873864.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319701|gb|EFH50123.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 788

 Score =  269 bits (688), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 202/610 (33%), Positives = 308/610 (50%), Gaps = 69/610 (11%)

Query: 20  KTTLAKAIFDQFS---HEFEGSCFVSDVRGNSE--TAGGLE---HLQKQMLSTTLSEKLE 71
           KTT+A+A+++Q S    EF+ + F+ +V+ +S+     G     HLQ++ LS   +++  
Sbjct: 227 KTTIARALYNQLSSDGDEFQQNLFMENVKRSSKRNKLDGYRLKLHLQERFLSEMFNQR-- 284

Query: 72  VAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVL 129
               NI H    +ER++  K LIVLDDV++V QL  L  +   FG G+R++V T DK++L
Sbjct: 285 --NINISHLGVAQERLKNQKALIVLDDVDDVEQLHALADQTQWFGNGTRVIVITEDKQLL 342

Query: 130 EKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVL 189
            K  G +  +Y V     +EAF  FC FAF +   PE     +  V       PL L +L
Sbjct: 343 -KAHGIDH-VYDVCLPSKDEAFHIFCRFAFGKTSAPEGYYDVAVEVAKLAGDLPLGLSIL 400

Query: 190 GSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGED 249
           G+SL   RK  W   ++ L R+  S    I  +L   ++ L  + K++FL IAC F GE 
Sbjct: 401 GASLRGMRKDEW---INALPRLRTSLNGKIEKLLGACYDGLDEKDKALFLHIACLFNGEK 457

Query: 250 KDFVASILDDSESDV---LDILIDKSLVSISGN-FLNMHDILQEMGRQIVRQESEKEPGK 305
            D V  +L  S  D    L +L D+SL+ I  + ++ MH +LQ+MG++I R +   +PGK
Sbjct: 458 VDRVKELLAISALDAEFGLKVLNDRSLIHICADGYIVMHCLLQQMGKEITRGQCLHDPGK 517

Query: 306 RSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLFKFYVPKF 364
              + D  EIS VL    GT  + GI LD+S+I G + +  +AF  M NL+  + Y    
Sbjct: 518 GKFIVDALEISDVLADETGTKTVLGISLDMSEIDGQVYISEKAFEKMPNLQFLRLY---- 573

Query: 365 YEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNL 424
                +P  + E         LP+GLDYLP+KLR LHWD+YP++ +PS F+P+ LVEL +
Sbjct: 574 ---NSIPDKAAE-------FDLPHGLDYLPRKLRLLHWDSYPIKCMPSKFRPEFLVELTM 623

Query: 425 RCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNL 484
           R SK+E+ WEG        IQ    L  +      ++   P+         +   +C NL
Sbjct: 624 RDSKLEKLWEG--------IQPLTSLKYMDLSASTNIGDIPNLSRAKNLEKLYLRFCENL 675

Query: 485 IEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
           +  P                    S+++ L  L+VLD+  C +LK + T+   L SL  L
Sbjct: 676 VTVPS-------------------SALQNLNKLKVLDMSCCIKLKTLPTNI-NLESLSVL 715

Query: 545 ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
            L GC  L+ FP I  +++ +       T I ++PS  +    L  L +  C  L  +P 
Sbjct: 716 NLRGCSKLKRFPFISTQIQFMSL---GETAIEKVPSQIKLCSRLVSLEMAGCKNLRTIPP 772

Query: 605 NIGSLEYLYY 614
              S+E + Y
Sbjct: 773 FPASIEIVDY 782



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           +  L +  S +E++   I+ LT L+ +DL     +  I  +  + ++L  L L  C NL 
Sbjct: 618 LVELTMRDSKLEKLWEGIQPLTSLKYMDLSASTNIGDIP-NLSRAKNLEKLYLRFCENLV 676

Query: 554 HFPE-ILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
             P   L+ +  LK +  S    +  LP++  NL  L VL +  CSKL   P     +++
Sbjct: 677 TVPSSALQNLNKLKVLDMSCCIKLKTLPTNI-NLESLSVLNLRGCSKLKRFPFISTQIQF 735

Query: 612 LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           +       +AI ++PS + L + L SL+ + CK L + P
Sbjct: 736 MSL---GETAIEKVPSQIKLCSRLVSLEMAGCKNLRTIP 771


>gi|359495256|ref|XP_002272078.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1130

 Score =  269 bits (687), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 200/601 (33%), Positives = 299/601 (49%), Gaps = 110/601 (18%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG-GLEHLQKQMLSTTLSEKLEVAGPNIP 78
           KTT+AKAI+++ S+ F+ + F+++V  NS      L   Q+ +   ++            
Sbjct: 225 KTTIAKAIYNKISYHFQSTIFLTNVGENSRGHHLNLPQFQQLLDDASIG----------- 273

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
             T  R +  ++L+V+DDV+ + Q++ L+   D F   SRI+ TTRD+ +L   + +   
Sbjct: 274 --TYGRTKNKRVLLVVDDVDRLSQVEYLVKLRDSFSLRSRIIFTTRDRHLLNVAKLDAS- 330

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            Y   GL  EEA   F   AFK+    ED       VV Y KG+PL L+VLGSSL  K  
Sbjct: 331 -YESKGLTHEEAIHLFSWHAFKQTFPKEDYVGLVNHVVGYVKGHPLALKVLGSSLFGKTI 389

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
           + W  +LH L +    EI   Y+ LK+SF+ LTP  + IFL + C  +G+D++ V++ILD
Sbjct: 390 TEWKCILHKLRKNTHGEI---YNELKVSFDGLTPTEQEIFLKVVCLLKGKDEESVSTILD 446

Query: 259 D----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
                SES +  +L D  L +IS N L MHD+LQ+MG++++ + +  EP KRSRL D K+
Sbjct: 447 SLGLGSESGI-QVLHDMCLATISNNKLYMHDLLQQMGQKLIDENNPHEPSKRSRLQDSKD 505

Query: 315 ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP--- 371
           +   L  N GT+ I+ I                F++   L++ K Y      ++ LP   
Sbjct: 506 VYPRLTRNTGTEEIQKI---------------QFSSAGFLKMPKLYSLMHLPLKSLPPNF 550

Query: 372 ----------SMSTEEQL---SYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
                     S S   QL    Y ++    G + + K L  +H    PL++LP NF   +
Sbjct: 551 PGDSLIFLDWSRSNIRQLWKDEYPRLTRNTGTEAIQKLLSPMH---LPLKSLPPNFPGDS 607

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
           L+ L+L  S + Q W+G K     S+ N K                           +N 
Sbjct: 608 LILLDLSRSNIRQLWKGNK-----SLGNLK--------------------------VMNL 636

Query: 479 SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
           SYC NL++                 I + PS    +  L++L L+GCK+L+ + +S C+L
Sbjct: 637 SYCQNLVK-----------------ISKFPS----MPALKILRLKGCKKLRSLPSSICEL 675

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
           + L  L   GC NLE FPEI EKME+LK ++ D T I ELPSS  +L  LE L +E C  
Sbjct: 676 KCLECLWCSGCSNLEAFPEITEKMENLKELHLDETAIKELPSSIYHLTALEFLNLEHCKN 735

Query: 599 L 599
           L
Sbjct: 736 L 736



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 18/143 (12%)

Query: 682 SLEILYLSGNNFESLPAIIKQMSQLRFIHL---EDFNMLQSLPELPLCLKYLHLIDCKML 738
           SL +L LS +N   L    K +  L+ ++L   ++   +   P +P  LK L L  CK L
Sbjct: 607 SLILLDLSRSNIRQLWKGNKSLGNLKVMNLSYCQNLVKISKFPSMP-ALKILRLKGCKKL 665

Query: 739 QSLPVLPF---CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRS-LPELP------L 788
           +SLP       CLE L  +GC+ L + PE+   ++  NL++ ++  + + ELP       
Sbjct: 666 RSLPSSICELKCLECLWCSGCSNLEAFPEITEKME--NLKELHLDETAIKELPSSIYHLT 723

Query: 789 CLQLLTVRNCNRLQSLPEILLCL 811
            L+ L + +C  L S  E+  CL
Sbjct: 724 ALEFLNLEHCKNLGS--ELRSCL 744


>gi|357499349|ref|XP_003619963.1| Resistance gene analog protein [Medicago truncatula]
 gi|355494978|gb|AES76181.1| Resistance gene analog protein [Medicago truncatula]
          Length = 1247

 Score =  269 bits (687), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 210/610 (34%), Positives = 305/610 (50%), Gaps = 99/610 (16%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S+D V  +GI G GG+GKTTLA+A+++  + +FE  CF+ DVR NS    GLE LQ+Q
Sbjct: 218 LESNDGVWKIGILGTGGMGKTTLAQAVYNSIADQFECKCFLHDVRENS-LKHGLEFLQEQ 276

Query: 61  MLSTTLSEKLEVAGPN--IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS ++  + +    N  IP   K R+ + K+L++L+DV+++ QL+ L+GE    G GSR
Sbjct: 277 LLSKSIRFETKFGHVNEGIP-VIKRRLSQKKVLLILNDVDKLNQLENLVGEPGWLGHGSR 335

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRDK +L       KKIY   GL  E+A E      FK N      ++     V Y
Sbjct: 336 VIITTRDKCLLSSHGI--KKIYEAYGLNKEQALELVRTKTFKCNKTDASYDYILNRAVKY 393

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+GS+L  K        L    RI  +   DI  IL+IS++ L    +S+F
Sbjct: 394 ASGLPLALEVVGSNLFGKSIEECESTLDKYERIPHA---DIQKILRISYDSLDEEQQSVF 450

Query: 239 LDIACFFEGEDKDFVASILDDSES----DVLDILIDKSLVSISGN-------FLNMHDIL 287
           LDIACFF+  +K++   +L           + +L+DKSL+  + +        + +HD++
Sbjct: 451 LDIACFFKWHEKEYTQELLHGHYGYCIKSHIGVLVDKSLIKFNSDPNVSEFLAVTLHDLI 510

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL--SKIKGINLDP 345
           ++MG++IVRQES KEPG+RSRLW   +I  VL+ N G+  IE I L    S    I+++ 
Sbjct: 511 EDMGKEIVRQESIKEPGRRSRLWCCDDIVHVLQENTGSSKIEMIILKYRPSTEPVIDMNE 570

Query: 346 RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
           +AF  M+NL+                     E  ++SK     G  YLP  LR L W  +
Sbjct: 571 KAFKKMTNLKTL-----------------IVEDDNFSK-----GPKYLPSSLRVLEWSGF 608

Query: 406 PLRTLP--SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRS 463
              +L   SN K  N+  L L  SK             S +     L  LSF  C SL  
Sbjct: 609 TSESLSCFSNKKFNNIKNLTLDGSKY--------LTHISDVSGLPNLEKLSFHCCHSL-- 658

Query: 464 FPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLR 523
                     +TI+                               +SI  L  LE+LD  
Sbjct: 659 ----------ITIH-------------------------------NSIGYLIKLEILDAW 677

Query: 524 GCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE 583
           GC +L+       +L SL  LIL  C +L++FPE+L KM +++ I   RT I ELPSSF+
Sbjct: 678 GCNKLESFPP--LQLPSLKELILSRCSSLKNFPELLCKMTNIEEIELHRTSIGELPSSFK 735

Query: 584 NLPGLEVLFV 593
           NL  L  L +
Sbjct: 736 NLSELRHLSI 745



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 87/204 (42%), Gaps = 16/204 (7%)

Query: 560 EKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAA 619
           +K  ++K +  D +      S    LP LE L    C  L  + ++IG L  L  IL A 
Sbjct: 619 KKFNNIKNLTLDGSKYLTHISDVSGLPNLEKLSFHCCHSLITIHNSIGYLIKLE-ILDAW 677

Query: 620 SAIS-------QLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
                      QLPS       L+ L  S C  L++FP   L  ++ +  + +   ++ E
Sbjct: 678 GCNKLESFPPLQLPS-------LKELILSRCSSLKNFPE-LLCKMTNIEEIELHRTSIGE 729

Query: 673 IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
           +P     LS L  L +S  N + LP  + +  +LR + L   N L+ +  +P  L YL  
Sbjct: 730 LPSSFKNLSELRHLSISFVNLKILPECLSECHRLRELVLYGCNFLEEIRGIPPNLNYLSA 789

Query: 733 IDCKMLQSLPVLPFCLESLDLTGC 756
           IDCK L S        + L   GC
Sbjct: 790 IDCKSLSSSSRRMLLSQQLHDAGC 813



 Score = 40.4 bits (93), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 117/272 (43%), Gaps = 68/272 (25%)

Query: 681 SSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL-HLIDCKMLQ 739
           SSL +L  SG   ESL       S  +F ++++  +  S        KYL H+ D   L 
Sbjct: 598 SSLRVLEWSGFTSESLSC----FSNKKFNNIKNLTLDGS--------KYLTHISDVSGLP 645

Query: 740 SLPVLPF-CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPL-CLQLLTVRN 797
           +L  L F C  SL +T  N +  L    + L+ L+   CN L S P L L  L+ L +  
Sbjct: 646 NLEKLSFHCCHSL-ITIHNSIGYL----IKLEILDAWGCNKLESFPPLQLPSLKELILSR 700

Query: 798 CNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAA----ICFEFTNCLKLNG 853
           C+ L++ PE LLC      + +E++  H   +   P S K+ +    +   F N      
Sbjct: 701 CSSLKNFPE-LLC----KMTNIEEIELHRTSIGELPSSFKNLSELRHLSISFVNL----- 750

Query: 854 KANNKILADSL---LRIRHMAIASLR-----------LGYEMAIN--------------E 885
               KIL + L    R+R + +               L Y  AI+              +
Sbjct: 751 ----KILPECLSECHRLRELVLYGCNFLEEIRGIPPNLNYLSAIDCKSLSSSSRRMLLSQ 806

Query: 886 KLSELRGSLIVLP-GSE-IPDWFSNQSSGSSI 915
           +L +   + I+LP G+E IPDWF +QS  ++I
Sbjct: 807 QLHDAGCTNIILPSGTEGIPDWFEHQSRENTI 838


>gi|255579431|ref|XP_002530559.1| conserved hypothetical protein [Ricinus communis]
 gi|223529897|gb|EEF31827.1| conserved hypothetical protein [Ricinus communis]
          Length = 833

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 174/439 (39%), Positives = 266/439 (60%), Gaps = 30/439 (6%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S+D VQ++GIWGMGGIGKTT+   +F Q   +F   CFV+DVR   E +     LQ +
Sbjct: 152 LESTD-VQVIGIWGMGGIGKTTIVYKLFSQIHKQFPRQCFVADVREKFENSTKCS-LQSE 209

Query: 61  MLSTTLS-EKLEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +L   L  + L    P  +    + R+ + K+LIVLDDV+++ Q++ ++G    +G GSR
Sbjct: 210 ILYGLLGKDNLNTGMPMKLNSSVRRRLSQEKVLIVLDDVSDLDQIEYVVGSHVIYGSGSR 269

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I++T+RD+++L+       K+Y V  L   EA   F   AFK+N   ++     R  ++Y
Sbjct: 270 IIITSRDRQLLKNVGA---KVYEVKKLNHFEALHLFNLHAFKQNPPKKEYMELLRMAINY 326

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
            +G PL L+VLGS+L  K    W   L  L    ++++  I   L+IS++ L  + K IF
Sbjct: 327 AQGIPLALKVLGSNLYGKSVEEWEDELEKLKVSSDTKVKKI---LRISYDGLDEKQKEIF 383

Query: 239 LDIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQI 294
           LDIACFF+G DKD V ++L+         +  LIDKSLV+IS  N L MHD+LQ MG+ I
Sbjct: 384 LDIACFFKGYDKDIVTNVLNGCGFFAKSGISHLIDKSLVTISRDNKLGMHDLLQTMGKDI 443

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V +E  KE G+R+RLW+ +++ +VL  + GT ++EG+ L++S+I+ I+L   AF  + NL
Sbjct: 444 VSEE--KELGRRTRLWNSEDVYKVLAKDMGTKSVEGMLLNMSQIRYIHLSSTAFEKLCNL 501

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           R+ KFY   +++               +KV LP GL+Y P++LR+LHWD YPL+ LP  F
Sbjct: 502 RVLKFYEKNYFK--------------KNKVLLPEGLEYFPEELRFLHWDQYPLKCLPLQF 547

Query: 415 KPKNLVELNLRCSKVEQPW 433
           + +NLVEL++  S++ Q W
Sbjct: 548 RLENLVELHMPKSQIRQFW 566


>gi|215261577|gb|ACJ64857.1| disease resistance protein RPP1-like protein R3 [Arabidopsis
            thaliana]
          Length = 1193

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 278/967 (28%), Positives = 439/967 (45%), Gaps = 157/967 (16%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQ 58
            D V+++GIWG  GIGKTT+A+ +F+Q S  F+ S  + +++G        E +  L+ LQ
Sbjct: 234  DEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQ-LQ 292

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
             +MLS  ++ K       I H    +ER+R  K+ +VLD+V+++GQL  L  E+  FG G
Sbjct: 293  NEMLSQMINHK----DIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKEIQWFGLG 348

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SRI++TT D  VL K  G    +Y+V     +EAF+ FC  AF + H  +  +  +R V 
Sbjct: 349  SRIIITTEDLGVL-KAHG-INHVYKVEYPSNDEAFQIFCMNAFGQKHPNDGFDEIAREVT 406

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
                  PL L+VLGS+L    K  W + L  L    + +I    +I++ S++ L    K 
Sbjct: 407  YLAGELPLGLKVLGSALRGMSKPEWERTLPRLRTSLDGKIG---NIIQFSYDALCDEDKY 463

Query: 237  IFLDIACFFEGEDKDFVASILDD--SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
            +FL IAC F  E    V  +L         L IL  KSL+S  G  + MH +L++ GR+ 
Sbjct: 464  LFLYIACLFNKESTTKVEGLLGKFLDVRQGLHILAQKSLISFYGETIRMHTLLEQFGRET 523

Query: 295  -VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR----AFT 349
              +Q       K   L   ++I  VL  +           D  +  GINLD R       
Sbjct: 524  SCKQFVHHGYRKHQLLVGERDICEVLDDDTT---------DNRRFIGINLDLREEELKIN 574

Query: 350  NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
              +  R+  F   K    +KL       Q    ++ L + L Y   ++R L W  Y    
Sbjct: 575  EKTLERINDFQFVKINLRQKLLHFKIIRQPERVQLALED-LIYHSPRIRSLKWFGYQNIC 633

Query: 410  LPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLH 469
            LPS F P+ LVEL++R SK+++ WEG K      ++N K++                   
Sbjct: 634  LPSTFNPEFLVELDMRYSKLQKLWEGTK-----QLRNLKWM------------------- 669

Query: 470  FVCPVTINFSYCVNLIEFPQISGKVT--RLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCK 526
                   + SY ++L E P +S       L L   S++ E+PSSIE LT L+ LDL+GC 
Sbjct: 670  -------DLSYSIDLQELPNLSTATNLEELKLRNCSSLVELPSSIEKLTSLQRLDLQGCS 722

Query: 527  RLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL--EKMEHLKRIYSDRTPITELPSSFEN 584
             L  +  SF     L  L L  C +L   P  +    ++ L  I   R  + +LP + EN
Sbjct: 723  SLVELP-SFGNATKLKKLDLGNCSSLVKLPPSINANNLQELSLINCSR--VVKLP-AIEN 778

Query: 585  LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHC 643
               L  L +++CS L  LP +IG+   L+ + ++  S++ +LPSS+     L   D S+C
Sbjct: 779  ATKLRELKLQNCSSLIELPLSIGTANNLWKLDISGCSSLVKLPSSIGDMTSLEGFDLSNC 838

Query: 644  KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQ 702
              L                         E+P  I  L  L +L + G +  E+LP  I  
Sbjct: 839  SNLV------------------------ELPSSIGNLRKLTLLLMRGCSKLETLPTNINL 874

Query: 703  MSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSL 762
            +S LR + L D + L+S PE+   +  L+LI    ++ +P+       L +   +   SL
Sbjct: 875  IS-LRILDLTDCSRLKSFPEISTHIDSLYLIGTA-IKEVPLSIMSWSRLAVYKMSYFESL 932

Query: 763  PELPLCLQYLNLEDCNMLRSLPELPLC------LQLLTVRNCNRLQSLPEILLCLQELDA 816
             E P  L  +   +  + + + E+P        L++L + NCN L SLP++   L  + A
Sbjct: 933  NEFPHALDIIT--ELQLSKDIQEVPPWVKRMSRLRVLRLNNCNNLVSLPQLSDSLDYIYA 990

Query: 817  SVLEKLSK-----HSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMA 871
               + L +     ++P+++              F  C KLN +A + I+  S +R     
Sbjct: 991  DNCKSLERLDCCFNNPEIR------------LYFPKCFKLNQEARDLIMHTSTVRC---- 1034

Query: 872  IASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQ-SSGSSICIQLPPHSSCRNLIG 930
                                    +LPG+++P  F+++ +SG S+ I+L   SS    + 
Sbjct: 1035 -----------------------AMLPGTQVPACFNHRATSGDSLKIKL-KESSLPTTLR 1070

Query: 931  FAFCAVL 937
            F  C +L
Sbjct: 1071 FKACIML 1077


>gi|297794611|ref|XP_002865190.1| hypothetical protein ARALYDRAFT_494325 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297311025|gb|EFH41449.1| hypothetical protein ARALYDRAFT_494325 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1127

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 277/927 (29%), Positives = 419/927 (45%), Gaps = 130/927 (14%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV--RGNSETAGGLE------ 55
            S+ V++VGIWG  GIGKTT+A+A+F Q S +F+ S F+  V    + E   G        
Sbjct: 205  SEEVRMVGIWGPSGIGKTTIARALFSQLSCQFQSSVFIDRVFISKSMEVYSGANLVDYNM 264

Query: 56   --HLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
              HLQ+  L+    +K       I H    +  V+  K LIV+DD+++   L  L G   
Sbjct: 265  KLHLQRAFLAEFFDKK----DIKIDHIGAMENMVKHRKALIVIDDLDDQDVLDALAGRTQ 320

Query: 112  QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH 171
             FG GSRI+V TR+K  L +  G +  IY+V       A E FC  AF+++  P+     
Sbjct: 321  WFGSGSRIIVVTRNKHFL-RANGIDH-IYKVCLPSNALALEMFCRSAFRKSSPPDGFMEL 378

Query: 172  SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT 231
            S  V       PL L VLGS+L  + K +W  +L  L  +       I   L++S++ L 
Sbjct: 379  SSEVALRAGNLPLGLNVLGSNLRGRDKGYWIDMLPRLQGLDGK----IGKTLRVSYDGLN 434

Query: 232  PRV-KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDIL 287
             R  ++IF  IAC F GE    +  +L +S  DV   L  L+D+SL+    N + MH +L
Sbjct: 435  NRKDEAIFRHIACIFNGEKVSDIKLLLANSNLDVNIGLKNLVDRSLICERFNTVEMHSLL 494

Query: 288  QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA 347
            QEMG++IVR +S+ EPG+R  L D K+I  VL+ N GT  + GI LD+ +   +++   +
Sbjct: 495  QEMGKEIVRTQSD-EPGEREFLVDLKDICDVLEDNAGTKKVLGITLDIDETDELHIHESS 553

Query: 348  FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
            F  M NL   K Y  K             +Q    +  LP   +YLP KLR L +D YPL
Sbjct: 554  FKGMHNLLFLKIYTKKL------------DQKKEVRWHLPERFNYLPSKLRLLRFDRYPL 601

Query: 408  RTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSN 467
            + LPSNF P+NLV+L ++ SK+E+ WEG        + +   L  +  +G ++L+  P  
Sbjct: 602  KRLPSNFHPENLVKLQMQQSKLEKLWEG--------VHSLAGLRNMDLRGSKNLKEIPDL 653

Query: 468  LHFVCPVTINFSYCVNLIEFP---QISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLR 523
                   T+  S C +L+E P   Q   K+  L +     +E +P+ +  L  L  L+L 
Sbjct: 654  SMATNLETLKLSSCSSLVELPSSIQYLNKLNDLDISYCDHLETIPTGVN-LKSLYRLNLS 712

Query: 524  GCKRLKR---ISTSFCKLRSLVTLILLGCLNLEHFPEIL--EKME-----------HLKR 567
            GC RLK    IST+   L    T  +   L L++  E++  E+++            L R
Sbjct: 713  GCSRLKSFLDISTNISWLDIDQTAEIPSNLRLQNLDELILCERVQLRTPLMTMLSPTLTR 772

Query: 568  I-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLP 626
            + +S+   + E+PSS +NL  LE L + +C  L  LP  I +LE L              
Sbjct: 773  LTFSNNQSLVEVPSSIQNLNQLEHLEIMNCRNLVTLPTGI-NLESLI------------- 818

Query: 627  SSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL 686
                      +LD SHC  L +FP       + +  L +S  A+ E+P  I  LS L  L
Sbjct: 819  ----------ALDLSHCSQLRTFPDIS----TNISDLKLSYTAIEEVPLWIEKLSLLCNL 864

Query: 687  YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF 746
             ++G    +L  +   +S+L+ +   DF+   +L E        +    +M + LP   F
Sbjct: 865  DMNG--CSNLLRVSPNISKLKHLEGADFSDCVALTEAS-----WNGSSSEMAKFLPPDYF 917

Query: 747  CLESLDLTGC----------------NMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCL 790
                L+   C                 ++ S  E+P    Y          SLP + +C 
Sbjct: 918  STVKLNFINCFNLDLKALIQNQTFSMQLILSGEEVP---SYFAHRTTGSSISLPHISVCQ 974

Query: 791  QLLTVRNCN--RLQSLPEILLCLQ-ELDASVLEKLSKH--SPDLQWAPESLKSAAICFEF 845
               + R C    ++S   I +    E+    ++KL  H  S D      +    A    F
Sbjct: 975  SFFSFRGCTVIDVESFSTISVSFDIEVCCRFIDKLGNHVDSTDFPGYFRTTNLGAHLVIF 1034

Query: 846  TNCLKLNGKANNKILADSLLRIRHMAI 872
              C  LN   +     D      HM I
Sbjct: 1035 DCCFPLN--EDTTTFLDGQFNYDHMDI 1059



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 128/536 (23%), Positives = 226/536 (42%), Gaps = 100/536 (18%)

Query: 554  HFPEILEKM-EHLKRIYSDRTPITELPSSFE----------------------NLPGLEV 590
            H PE    +   L+ +  DR P+  LPS+F                       +L GL  
Sbjct: 579  HLPERFNYLPSKLRLLRFDRYPLKRLPSNFHPENLVKLQMQQSKLEKLWEGVHSLAGLRN 638

Query: 591  LFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
            + +     L  +PD   +       L++ S++ +LPSS+   N L  LD S+C  LE+ P
Sbjct: 639  MDLRGSKNLKEIPDLSMATNLETLKLSSCSSLVELPSSIQYLNKLNDLDISYCDHLETIP 698

Query: 651  RTFLLGLSAMGLLHISD----YAVREIPQEIAYLSSLEILYLSGN----NFESLPAIIKQ 702
                + L ++  L++S      +  +I   I++L   +   +  N    N + L  I+ +
Sbjct: 699  TG--VNLKSLYRLNLSGCSRLKSFLDISTNISWLDIDQTAEIPSNLRLQNLDEL--ILCE 754

Query: 703  MSQLRFIHLE---------DFNMLQSLPELPLC------LKYLHLIDCKMLQSLPVLPFC 747
              QLR   +           F+  QSL E+P        L++L +++C+ L +LP     
Sbjct: 755  RVQLRTPLMTMLSPTLTRLTFSNNQSLVEVPSSIQNLNQLEHLEIMNCRNLVTLPT-GIN 813

Query: 748  LESL---DLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSL 804
            LESL   DL+ C+ LR+ P++   +  L L       ++ E+PL ++ L+          
Sbjct: 814  LESLIALDLSHCSQLRTFPDISTNISDLKLS----YTAIEEVPLWIEKLS---------- 859

Query: 805  PEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSL 864
               LLC   LD +    L + SP++    + L+ A    +F++C+ L   + N   ++  
Sbjct: 860  ---LLC--NLDMNGCSNLLRVSPNIS-KLKHLEGA----DFSDCVALTEASWNGSSSEMA 909

Query: 865  LRIRHMAIASLRLGYEMAINEKLSELRGSL-----IVLPGSEIPDWFSNQSSGSSICIQL 919
              +     ++++L +    N  L  L  +      ++L G E+P +F+++++GSS  I L
Sbjct: 910  KFLPPDYFSTVKLNFINCFNLDLKALIQNQTFSMQLILSGEEVPSYFAHRTTGSS--ISL 967

Query: 920  PPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSE-TKHVDLGYNSRYI 978
            P  S C++   F  C V     +D + F    VSF  ++  + + +   HVD      Y 
Sbjct: 968  PHISVCQSFFSFRGCTV-----IDVESFSTISVSFDIEVCCRFIDKLGNHVDSTDFPGYF 1022

Query: 979  EDLIDSDRVILGFKPCL-----NVGFPDG---YHHTIATFKFFAERKFYKIKRCGL 1026
                    +++ F  C         F DG   Y H    F+        K+K CG+
Sbjct: 1023 RTTNLGAHLVI-FDCCFPLNEDTTTFLDGQFNYDHMDIQFRLTNGNSQLKLKGCGI 1077


>gi|357469487|ref|XP_003605028.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506083|gb|AES87225.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1340

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 217/659 (32%), Positives = 345/659 (52%), Gaps = 45/659 (6%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNS-ETAGGLEHLQK 59
           ++SS+ + ++GI+G GGIGKT  A  I+++  H+FE + F+++VR  S E+ GGLE+LQ+
Sbjct: 184 INSSERICMLGIYGAGGIGKTQFALHIYNKIRHQFEAASFLANVREKSNESIGGLENLQR 243

Query: 60  QMLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            +L+  + E  +V G +    +  K R+   ++L++LDDV+ V QL+ L G  D F  GS
Sbjct: 244 TLLNE-IGEATQVFGSSFRGSSEIKHRLSHKRVLLILDDVDSVKQLESLAGGHDWFNSGS 302

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            I++TTRD  +L K    + K Y++  L   E+ E FC +AF  +   E+    S   +S
Sbjct: 303 IIIITTRDIDILHK-HDVKIKPYKLEELNHHESTELFCWYAFNMSRPVENFEKISSHAIS 361

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y KG PL L V+GS+L  K    W   L    ++ ++EI  +   ++IS+  L+   + I
Sbjct: 362 YAKGIPLALRVIGSNLKGKSIEEWDIELQKYRKVPDAEIQGV---MEISYKGLSDLDQKI 418

Query: 238 FLDIACFFEGEDKDFVASILDDSE-SDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIV 295
           FLDIACFF+GE  D+   ILD  +   V+     K L+++  N  L MHD++Q+MGR+IV
Sbjct: 419 FLDIACFFKGERWDYAKRILDACDFYPVIRAFNSKCLITVDENGLLQMHDLIQDMGREIV 478

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           R+ES   PG+RSRLW  K++  VLK N G+  +EG+ + + +    +  P    N  NLR
Sbjct: 479 RKESTSNPGERSRLWSHKDVLDVLKGNLGSTKVEGMIILIVRNTLFSSGPSYLPN--NLR 536

Query: 356 L--FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           L  +K Y  K + +   P    + +L +S + L                 +  +  +P  
Sbjct: 537 LLDWKCYPSKDFPLNFYPYRIVDFKLPHSSMILKKPFQIFEDLTLINLSHSQSITQVPDL 596

Query: 414 FKPKNLVELNL-RCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
              KNL    L +C K+ + ++     +P    N  YLSA     C  L+SF   ++   
Sbjct: 597 SGAKNLRVFTLDKCHKLVR-FDISIGFMP----NMVYLSA---SECTELKSFVPKIYLPS 648

Query: 473 PVTINFSYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
              ++F+YC     FPQ+  K+    ++++  +AI+E P SI  LT LE +D+  CK LK
Sbjct: 649 LQVLSFNYCKKFEYFPQVMQKMDKPLKIHMISTAIKEFPKSILNLTGLEYIDMSICKGLK 708

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
            +S+SF  L  LVTL + GC  L          +  +R +++R  +    S+ E L   E
Sbjct: 709 DLSSSFLLLPRLVTLKIDGCSQLG---------QSFQR-FNERHSVANKYSNLEALHFSE 758

Query: 590 V-LFVEDCSK-LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
             L  ED +  ++N P        L Y+  + +    LP+ +  S  L+SLD S C+ L
Sbjct: 759 ANLSDEDVNAIIENFPK-------LAYLKVSHNGFVSLPNCIRGSMHLKSLDVSFCRNL 810


>gi|105922849|gb|ABF81440.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1228

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 207/641 (32%), Positives = 307/641 (47%), Gaps = 116/641 (18%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
           KTT+A+ ++D+   +FEGSCF+++VR       G  HLQ+Q+LS  L E+  +   +   
Sbjct: 308 KTTVARVVYDRIRWQFEGSCFLANVREAFAEKDGRRHLQEQLLSEILMERANICDSSRGI 367

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K R++R K+L+VLDDV++  QL+ L  E   FG GSRI++T+RDK+VL   R    +
Sbjct: 368 EMIKRRLQRKKILVVLDDVDDHKQLESLAAESKWFGPGSRIIITSRDKQVLT--RNGVAR 425

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY    L  ++A   F   A K +   ED    S+ VV Y  G PL LEV+GS +  +  
Sbjct: 426 IYEAEKLNDDDALTLFSQKALKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFMHGRSI 485

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             WG  ++ LN I + EI    D+L+I F+ L    K IFLDIACF +G  KD +  ILD
Sbjct: 486 LEWGSAINRLNDIPDREI---IDMLRIGFDGLHELEKKIFLDIACFLKGFKKDRIIRILD 542

Query: 259 DSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                      +LI+KSL+S+S                                      
Sbjct: 543 SCGFHAHIGTQVLIEKSLISVS-------------------------------------- 564

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
                 ++G + IE IFLD+  IK    + +AF+ M+ LRL K                 
Sbjct: 565 -----RDQGKETIEAIFLDMPGIKEALWNMKAFSKMTKLRLLKI---------------- 603

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
                   VQL  G + L  KLR+L W++YP ++LP+  +   LVEL++  S +EQ W G
Sbjct: 604 ------DNVQLSEGPEDLSNKLRFLEWNSYPSKSLPAGLQVDELVELHMANSSIEQLWYG 657

Query: 436 EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG--K 493
                        Y SA++ K                   IN S  +NL + P ++G   
Sbjct: 658 -------------YKSAVNLK------------------IINLSNSLNLSKTPDLTGIPN 686

Query: 494 VTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
           +  L + G +++ EV  S+     L+ ++L  CK + RI  +  ++ SL    L GC  L
Sbjct: 687 LESLIIEGCTSLSEVHPSLAHHKKLQYMNLVNCKSI-RILPNNLEMESLKICTLDGCSKL 745

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           E FP+I+  M  L  +  D T ITEL SS  +L GL +L +  C  L+++P +IG L+ L
Sbjct: 746 EKFPDIVGNMNELMVLRLDETGITELSSSIRHLIGLGLLSMNSCKNLESIPSSIGFLKSL 805

Query: 613 YYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
             + L+  S +  +P ++     L   D     GL S PRT
Sbjct: 806 KKLDLSGCSELKYIPENLGKVESLEEFD-----GL-SNPRT 840



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 171/365 (46%), Gaps = 75/365 (20%)

Query: 657 LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF--ESLPAIIKQMSQLRFIHLEDF 714
           ++ + LL I +  + E P+++    S ++ +L  N++  +SLPA + Q+ +L  +H+ + 
Sbjct: 595 MTKLRLLKIDNVQLSEGPEDL----SNKLRFLEWNSYPSKSLPAGL-QVDELVELHMANS 649

Query: 715 NMLQSLP--ELPLCLKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSL-PELP--L 767
           ++ Q     +  + LK ++L +   L   P L     LESL + GC  L  + P L    
Sbjct: 650 SIEQLWYGYKSAVNLKIINLSNSLNLSKTPDLTGIPNLESLIIEGCTSLSEVHPSLAHHK 709

Query: 768 CLQYLNLEDCNMLRSLPE-LPL-CLQLLTVRNCNRLQSLPEILLCLQEL-----DASVLE 820
            LQY+NL +C  +R LP  L +  L++ T+  C++L+  P+I+  + EL     D + + 
Sbjct: 710 KLQYMNLVNCKSIRILPNNLEMESLKICTLDGCSKLEKFPDIVGNMNELMVLRLDETGIT 769

Query: 821 KLS---KHSPDLQWAP-------ESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHM 870
           +LS   +H   L           ES+ S+    +    L L+G +  K + ++L ++  +
Sbjct: 770 ELSSSIRHLIGLGLLSMNSCKNLESIPSSIGFLKSLKKLDLSGCSELKYIPENLGKVESL 829

Query: 871 ----AIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHS--- 923
                +++ R G+ +A+              PG+EIP WF++QS GSSI +Q+P  S   
Sbjct: 830 EEFDGLSNPRTGFGIAV--------------PGNEIPGWFNHQSKGSSISVQVPSWSMGF 875

Query: 924 -SCRNLIGFA-------------------FCAVLDSKKVDSDCFRYFYVSFQFDLEIKTL 963
            +C     +                     C   +S +V SD    FY+SF +   +K L
Sbjct: 876 VACVAFSAYGERPLRCDFKANGRENYPSLMCISCNSIQVLSDHIWLFYLSFDY---LKEL 932

Query: 964 SETKH 968
            E +H
Sbjct: 933 KEWQH 937


>gi|356533779|ref|XP_003535437.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 983

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 217/705 (30%), Positives = 337/705 (47%), Gaps = 104/705 (14%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+AKA+F Q   +++  CF+ +VR  S   G L  L+ ++LS  L E           
Sbjct: 232 KTTIAKALFSQLFPQYDAVCFLPNVREESRRIG-LTSLRHKLLSDLLKEG---------- 280

Query: 80  FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKI 139
             + R+   K+LIVLDDV+   QL  L    +  G  S++++TTR++ +L + R +++ +
Sbjct: 281 HHERRLSNKKVLIVLDDVDSFDQLDELCEPCNYVGPDSKVIITTRNRHLL-RGRVDDRHV 339

Query: 140 YRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKS 199
           Y V    F E+ E F   AF E    +     S   V+  +G PL L+VLGS+L  +   
Sbjct: 340 YEVKTWSFAESLELFSLHAFNERRPKKGYEDLSNRAVNCARGVPLALKVLGSNLYSRSIK 399

Query: 200 HWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDD 259
            W     +L+++       I D+L++S++ L    K IFLDIA FF+GE KD V  ILD 
Sbjct: 400 FWDG---ELSKLENYRNDSIQDVLQVSYDGLHDLEKKIFLDIAFFFKGEHKDDVIRILDA 456

Query: 260 SE---SDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
            +   +  +++L DK+LV++S +  + MHD++QEMG  IVR  SE +P  RSRL D +E+
Sbjct: 457 CDFYATSGIEVLEDKALVTLSNSGMIQMHDLIQEMGLNIVRGGSE-DPRNRSRLRDIEEV 515

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
           S VL++  G+D IEGI LDLS I+ ++L+   F  M+NLR+ + YV         PS   
Sbjct: 516 SDVLENKNGSDLIEGIKLDLSSIEDLHLNADTFDRMTNLRILRLYV---------PSGKR 566

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
              + +S V     L  L  KLRYL W+   L++LP +F  K LVE+ +  S V + W+G
Sbjct: 567 SGNVHHSGV-----LSKLSSKLRYLEWNGCRLKSLPKSFCGKMLVEICMPHSHVTELWQG 621

Query: 436 --------------------------------------EKAC-VPSSIQNFKYLSALSFK 456
                                                 E  C +  S+ +   L   +  
Sbjct: 622 VQDLANLVRIDLSECKHLKNVPDLSKASKLKWVNLSGCESLCDIHPSVFSLDTLETSTLD 681

Query: 457 GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTD 516
           GC++++S  S  H      I+   C +L EF   S  +  L L  + IE + SSI  LT 
Sbjct: 682 GCKNVKSLKSEKHLRSLKEISVIGCTSLKEFWVSSDSIKGLDLSSTGIEMLDSSIGRLTK 741

Query: 517 LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPIT 576
           L  L++ G  R   +      L+ L  L +  C                 R+  D+  + 
Sbjct: 742 LRSLNVEGL-RHGNLPNELFSLKCLRELRICNC-----------------RLAIDKEKLH 783

Query: 577 ELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
            L   F+    L VL ++DC  L  LP+NI  L  L+ +    S +  LP+++     L 
Sbjct: 784 VL---FDGSRSLRVLHLKDCCNLSELPENIWGLSKLHELRLDGSRVKTLPTTIKHLKRLN 840

Query: 637 SLDSSHCKGLESFPR----------TFLLGLSAMGLLHISDYAVR 671
           +L   +C+ LES P+          T    L  + +  ++D+A+R
Sbjct: 841 TLSLKNCRMLESLPKLPPNVLEFIATNCRSLRTVSISTLADFALR 885



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 135/329 (41%), Gaps = 74/329 (22%)

Query: 515 TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTP 574
           + L  L+  GC RLK +  SFC  + LV +    C+   H                    
Sbjct: 581 SKLRYLEWNGC-RLKSLPKSFCG-KMLVEI----CMPHSH-------------------- 614

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +TEL    ++L  L  + + +C  L N+PD   + +  +  L+   ++  +  SV   + 
Sbjct: 615 VTELWQGVQDLANLVRIDLSECKHLKNVPDLSKASKLKWVNLSGCESLCDIHPSVFSLDT 674

Query: 635 LRSLDSSHCKGLESFPR----TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
           L +     CK ++S         L  +S +G   + ++ V           S++ L LS 
Sbjct: 675 LETSTLDGCKNVKSLKSEKHLRSLKEISVIGCTSLKEFWVSS--------DSIKGLDLSS 726

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNM---------LQSLPELPLC--------------- 726
              E L + I ++++LR +++E             L+ L EL +C               
Sbjct: 727 TGIEMLDSSIGRLTKLRSLNVEGLRHGNLPNELFSLKCLRELRICNCRLAIDKEKLHVLF 786

Query: 727 -----LKYLHLIDCKMLQSLPVLPFCLESLD---LTGCNMLRSLPELPLCLQYLN---LE 775
                L+ LHL DC  L  LP   + L  L    L G + +++LP     L+ LN   L+
Sbjct: 787 DGSRSLRVLHLKDCCNLSELPENIWGLSKLHELRLDG-SRVKTLPTTIKHLKRLNTLSLK 845

Query: 776 DCNMLRSLPELPLCLQLLTVRNCNRLQSL 804
           +C ML SLP+LP  +      NC  L+++
Sbjct: 846 NCRMLESLPKLPPNVLEFIATNCRSLRTV 874


>gi|227438193|gb|ACP30586.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1001

 Score =  268 bits (684), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 216/679 (31%), Positives = 322/679 (47%), Gaps = 98/679 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLE-------H 56
           S+ V+++GIWG  GIGKTT+A+A+F + S  F+ S F+ D +  S+   G         +
Sbjct: 199 SEEVRMIGIWGPSGIGKTTIARALFGRLSRRFQCSVFI-DRKFISKIMEGYRGANPDDYN 257

Query: 57  LQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           ++  +    LSE L      I H    + R++  K+LI +DD+++   L  L G+   FG
Sbjct: 258 MKLSLQRHFLSEILGTRHIQIDHLGAVENRLKNQKVLISIDDLDDQVVLDVLAGQAHWFG 317

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSRI+V T+D+  L     E   IY V     E A E  C   FK+N   E     +  
Sbjct: 318 SGSRIIVVTKDRHFLRAH--EIDHIYEVCLPSEERALEILCRSDFKQNSPREGFEKLAVE 375

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDL-NRICESEIHDIYDILKISFNKL-TP 232
           V  +    PL L VLGS+L  +  ++W  +L  L N + E     I  IL+IS++ L   
Sbjct: 376 VTRHAGSLPLGLTVLGSTLRGRDNAYWMDILPTLQNGVGEK----IEKILRISYDGLDRE 431

Query: 233 RVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQE 289
             K I+  IAC F GE   ++  +L+D    V   ++ L+DKSL+ +  + + MH +LQE
Sbjct: 432 EDKVIYRHIACLFNGEKVPYIKLLLEDRNLGVNVGIENLVDKSLIHVRSDTVEMHSLLQE 491

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAF 348
           +GR+IVR +S  EPG R  L D  +I  VL  N GT  + G+ LD+ KI   +++   AF
Sbjct: 492 IGRKIVRAQSIDEPGNREFLVDLDDICDVLSENSGTKKVLGVALDMDKIHDELHVHENAF 551

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             MSNLR  KFY           +   E     ++++L    DYLP KLR L WD YP+R
Sbjct: 552 KGMSNLRFLKFY-----------TFGKE-----ARLRLNESFDYLPSKLRLLCWDKYPMR 595

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGE-------------------------------- 436
            LPS F P+NLV L ++ S +E  WEG                                 
Sbjct: 596 CLPSKFCPQNLVILEMKNSNLENLWEGVSPLGHLKKMDLWGSKNLKEIPDLSKATSLEKL 655

Query: 437 --KAC-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
             K C     +PSSI     L+ L+   C +L + P+ ++      +N   C  L  FP 
Sbjct: 656 DLKGCSSLVELPSSISKLNKLTELNMPACTNLETLPTGMNLESLNRLNLKGCTRLRIFPN 715

Query: 490 ISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI--LL 547
           IS  ++ L L +++I E PS++  L +L +  + G K  +++      L  L+T++   L
Sbjct: 716 ISRNISELILDETSITEFPSNL-YLENLNLFSMEGIKS-EKLWERAQPLTPLMTMLSPSL 773

Query: 548 GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
             L+L   P ++                 ELPSSF NL  L  L +  C  L+ LP  I 
Sbjct: 774 RILSLSDIPSLV-----------------ELPSSFHNLHNLTNLSITRCKNLEILPTRIN 816

Query: 608 SLEYLYYILAAASAISQLP 626
               +  IL+  S +   P
Sbjct: 817 LPSLIRLILSGCSRLRSFP 835



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 111/273 (40%), Gaps = 32/273 (11%)

Query: 305 KRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKF 364
           K+  LW  K +  +   +K T   +   LDL     +   P + + ++  +L +  +P  
Sbjct: 630 KKMDLWGSKNLKEIPDLSKATSLEK---LDLKGCSSLVELPSSISKLN--KLTELNMPAC 684

Query: 365 YEIEKLPSMSTEEQLSYSKVQLPNGLDYLP---KKLRYLHWDTYPLRTLPSNFKPKNLVE 421
             +E LP+    E L+   ++    L   P   + +  L  D   +   PSN   +NL  
Sbjct: 685 TNLETLPTGMNLESLNRLNLKGCTRLRIFPNISRNISELILDETSITEFPSNLYLENLNL 744

Query: 422 LNLRCSKVEQPWEGEKAC------------------------VPSSIQNFKYLSALSFKG 457
            ++   K E+ WE  +                          +PSS  N   L+ LS   
Sbjct: 745 FSMEGIKSEKLWERAQPLTPLMTMLSPSLRILSLSDIPSLVELPSSFHNLHNLTNLSITR 804

Query: 458 CQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDL 517
           C++L   P+ ++    + +  S C  L  FP IS  V  L L Q+ IEE+P  +E  + L
Sbjct: 805 CKNLEILPTRINLPSLIRLILSGCSRLRSFPDISRNVLDLNLIQTGIEEIPLWVEDFSRL 864

Query: 518 EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
           + L +  C +LK +S S  +   +V     G L
Sbjct: 865 KYLFMESCPKLKYVSISTLRHLEMVDFSNCGAL 897



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 180/398 (45%), Gaps = 52/398 (13%)

Query: 551 NLEHFPEILEKMEHLKR--IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGS 608
           NLE+  E +  + HLK+  ++  +  + E+P        LE L ++ CS L  LP +I  
Sbjct: 615 NLENLWEGVSPLGHLKKMDLWGSKN-LKEIPD-LSKATSLEKLDLKGCSSLVELPSSISK 672

Query: 609 LEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD 667
           L  L  + + A + +  LP+ + L ++ R L+   C  L  FP         +  L + +
Sbjct: 673 LNKLTELNMPACTNLETLPTGMNLESLNR-LNLKGCTRLRIFPNIS----RNISELILDE 727

Query: 668 YAVREIPQEIAYLSSLEILYLSGNNFESL--------PAIIKQMSQLRFIHLEDFNMLQS 719
            ++ E P  + YL +L +  + G   E L        P +      LR + L D   + S
Sbjct: 728 TSITEFPSNL-YLENLNLFSMEGIKSEKLWERAQPLTPLMTMLSPSLRILSLSD---IPS 783

Query: 720 LPELPLCLKYLH------LIDCKMLQSLPV---LPFCLESLDLTGCNMLRSLPELPLCLQ 770
           L ELP     LH      +  CK L+ LP    LP  L  L L+GC+ LRS P++     
Sbjct: 784 LVELPSSFHNLHNLTNLSITRCKNLEILPTRINLP-SLIRLILSGCSRLRSFPDISR--- 839

Query: 771 YLNLEDCNMLRS-LPELPLC------LQLLTVRNCNRLQSLP-EILLCLQELDASVLEKL 822
             N+ D N++++ + E+PL       L+ L + +C +L+ +    L  L+ +D S    L
Sbjct: 840 --NVLDLNLIQTGIEEIPLWVEDFSRLKYLFMESCPKLKYVSISTLRHLEMVDFSNCGAL 897

Query: 823 SKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMA 882
           +        + E+++   I  E      +  +A++ +  + + R++   I    L  E  
Sbjct: 898 TGAGIIGYQSGEAMRPDDIETEVL----VPEEASSSLQDNFVPRVKFRLINCFDLNLEAL 953

Query: 883 INEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLP 920
           + ++        ++L   E+P +F+++++G+S  + +P
Sbjct: 954 LQQQSV---FEQLILSCEEVPSYFTHKATGASTSLTVP 988


>gi|147799796|emb|CAN70507.1| hypothetical protein VITISV_024109 [Vitis vinifera]
          Length = 1350

 Score =  268 bits (684), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 185/516 (35%), Positives = 276/516 (53%), Gaps = 37/516 (7%)

Query: 97  VNEVG----QLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFE 152
           VN+ G     L+ L  E D F   S I++T+RDK+VL ++  +    Y V+ L  EEA +
Sbjct: 165 VNDQGVLHNALEYLAEEKDWFWAKSIIIITSRDKQVLAQYGADIP--YEVSKLNKEEAIK 222

Query: 153 HFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRIC 212
            F  +AFK+N   E     S +++ Y  G PL L+VLG+SL  K+ S+W   L  L  I 
Sbjct: 223 LFSLWAFKQNRPKEVYKNLSYNIIDYANGLPLALKVLGASLFGKKISNWESALCKLKIIP 282

Query: 213 ESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDVLDILIDKS 272
             EIH++   L+ISF+ L    K IFLD+ACFF+G+++DFV+ IL       +  L D+ 
Sbjct: 283 HMEIHNV---LRISFDGLDDIDKGIFLDVACFFKGDNRDFVSRILGPHAEHAITTLDDRC 339

Query: 273 LVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIF 332
           L+++S N L++HD++Q+MG +I+RQE  ++PG+RSRL D      VL  NKGT AIEG+F
Sbjct: 340 LITVSENMLDVHDLIQQMGWEIIRQECPEDPGRRSRLCDSNAY-HVLTGNKGTRAIEGLF 398

Query: 333 LDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDY 392
           LD  K     L   +F  M+ LRL K + P      KL          + K  LP   ++
Sbjct: 399 LDRCKFNPSELTTESFKEMNRLRLLKIHNPH----RKL----------FLKDHLPRDFEF 444

Query: 393 LPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSA 452
              +L YLHWD YPL +LP NF  KNLVEL+LR S ++Q W+G K  +   ++      +
Sbjct: 445 YSYELAYLHWDGYPLESLPINFHAKNLVELSLRDSNIKQVWKGNK--LHDKLRVIDLSHS 502

Query: 453 LSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR---LYLGQSAIEEVPS 509
           +  K      S P NL       +    C    +F +  G +     L L  +AI ++PS
Sbjct: 503 VHLKRIPDFSSVP-NLEI-----LTLKGCTTR-DFQKSKGDMREQRVLDLSGTAIMDLPS 555

Query: 510 SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE-HFPEILEKMEHLKRI 568
           SI  L  L+ L L+ C +L ++    C L SL  L L  C  +E   P  +  +  L+++
Sbjct: 556 SITHLNGLQTLLLQECLKLHQVPNHICHLSSLKVLDLGHCNIMEGGIPSDICHLSSLQKL 615

Query: 569 YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
             +R   + +P++   L  LEVL +  C+ L+ +P+
Sbjct: 616 NLERGHFSSIPTTINQLSRLEVLNLSHCNNLEQIPE 651



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 124/243 (51%), Gaps = 17/243 (6%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S + EVP  IE  ++L+ L L+ C+ L  + +S    +SL TL   GC  LE FPEIL+ 
Sbjct: 934  SDMNEVPI-IENPSELDSLCLQDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQD 992

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL-EYLYYILAAAS 620
            ME L+++Y + T I E+PSS + L GL+ L + +C  L NLP++I +L  +   +++   
Sbjct: 993  MESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCP 1052

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP--QEIA 678
              ++LP ++     L  L   H   + +F    L GL ++  L + D  +RE P  + I 
Sbjct: 1053 NFNKLPDNLGRLQSLEYLFVGHLDSM-NFQLPSLSGLCSLRTLKLQDCNLREFPPVKSIT 1111

Query: 679  YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
            Y                +P  I Q+  L+ + L    MLQ +PELP  L+ L    C  L
Sbjct: 1112 YHQC------------RIPDGISQLYNLKDLDLGHCKMLQHIPELPSRLRCLDAHHCTSL 1159

Query: 739  QSL 741
            ++L
Sbjct: 1160 ENL 1162



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 23/225 (10%)

Query: 444  IQNFKYLSALSFKGCQSLRSFPSNLH-FVCPVTINFSYCVNLIEFPQI---SGKVTRLYL 499
            I+N   L +L  + C++L S PS++  F    T++ S C  L  FP+I      + +LYL
Sbjct: 942  IENPSELDSLCLQDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYL 1001

Query: 500  GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
              +AI+E+PSSI+ L  L+ L LR CK L  +  S C L S  TL++  C N    P+ L
Sbjct: 1002 NGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNL 1061

Query: 560  EKMEHLKRIYSDRTPIT--ELPSSFENLPGLEVLFVEDCSKLD------------NLPDN 605
             +++ L+ ++         +LP S   L  L  L ++DC+  +             +PD 
Sbjct: 1062 GRLQSLEYLFVGHLDSMNFQLP-SLSGLCSLRTLKLQDCNLREFPPVKSITYHQCRIPDG 1120

Query: 606  IGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            I  L  L  + L     +  +P    L + LR LD+ HC  LE+ 
Sbjct: 1121 ISQLYNLKDLDLGHCKMLQHIPE---LPSRLRCLDAHHCTSLENL 1162



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 189/478 (39%), Gaps = 99/478 (20%)

Query: 589  EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
            EV  +E+ S+LD+L             L     ++ LPSS+     L +L  S C  LES
Sbjct: 938  EVPIIENPSELDSL------------CLQDCRNLTSLPSSIFGFKSLATLSCSGCSQLES 985

Query: 649  FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
            FP                     EI Q+   + SL  LYL+G   + +P+ I+++  L++
Sbjct: 986  FP---------------------EILQD---MESLRKLYLNGTAIKEIPSSIQRLRGLQY 1021

Query: 709  IHLEDFNMLQSLPELPLC----LKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRS--- 761
            + L +   L +LPE  +C     K L +  C     LP     L+SL+      L S   
Sbjct: 1022 LLLRNCKNLVNLPE-SICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMNF 1080

Query: 762  -LPELP-LC-LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASV 818
             LP L  LC L+ L L+DCN LR  P +    + +T   C R+      L  L++LD   
Sbjct: 1081 QLPSLSGLCSLRTLKLQDCN-LREFPPV----KSITYHQC-RIPDGISQLYNLKDLDLG- 1133

Query: 819  LEKLSKHSPDLQWAPESLKSAAICFEFTNCLKL-NGKANNKILADSLLRIRHMAIASLRL 877
                  H   LQ  PE L S   C +  +C  L N  + + +L  SL +     I     
Sbjct: 1134 ------HCKMLQHIPE-LPSRLRCLDAHHCTSLENLSSRSNLLWSSLFKCFKSRIQG--- 1183

Query: 878  GYEMAINEKLSELRGSLIVLPGSE--IPDWFSNQSSGSSICIQLP-PHSSCRNLIGFAFC 934
                       E R +LI        IP+W S+Q SG  I ++LP       + +GF  C
Sbjct: 1184 ----------REFRKTLITFIAESYGIPEWISHQKSGFKITMKLPWSWYENDDFLGFVLC 1233

Query: 935  AVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPC 994
            ++      ++   R F     FD +    S   H       ++ E   D D    G   C
Sbjct: 1234 SLHVPLDTETAKHRSFNCKLNFDHDSAYFSYQSH-------QFCEFCYDEDASSQG---C 1283

Query: 995  L----NVGFPDGYHHT-----IATFKFFAERKFYKIKRCGLCPVYANPSETKDNTFTI 1043
            L        P  YH        A+F  +   K  K+ RCG   +YA+  E   N  TI
Sbjct: 1284 LIYYPKSSIPKRYHSNEWRTLNASFNVYFGVKPVKVARCGFHFLYAHDYE--QNNLTI 1339



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 13/213 (6%)

Query: 575  ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
            +T LPSS      L  L    CS+L++ P+ +  +E L  +    +AI ++PSS+     
Sbjct: 959  LTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRG 1018

Query: 635  LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILY---LSG 690
            L+ L   +CK L + P + +  L++   L +S      ++P  +  L SLE L+   L  
Sbjct: 1019 LQYLLLRNCKNLVNLPES-ICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDS 1077

Query: 691  NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLES 750
             NF+ LP++   +  LR + L+D N+ +  P     +K +    C++   +  L + L+ 
Sbjct: 1078 MNFQ-LPSL-SGLCSLRTLKLQDCNLREFPP-----VKSITYHQCRIPDGISQL-YNLKD 1129

Query: 751  LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSL 783
            LDL  C ML+ +PELP  L+ L+   C  L +L
Sbjct: 1130 LDLGHCKMLQHIPELPSRLRCLDAHHCTSLENL 1162



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 15/169 (8%)

Query: 564 HLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAIS 623
           HLKRI             F ++P LE+L ++ C+  D    + G +     +  + +AI 
Sbjct: 504 HLKRI-----------PDFSSVPNLEILTLKGCTTRD-FQKSKGDMREQRVLDLSGTAIM 551

Query: 624 QLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE--IPQEIAYLS 681
            LPSS+   N L++L    C  L   P   +  LS++ +L +    + E  IP +I +LS
Sbjct: 552 DLPSSITHLNGLQTLLLQECLKLHQVP-NHICHLSSLKVLDLGHCNIMEGGIPSDICHLS 610

Query: 682 SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
           SL+ L L   +F S+P  I Q+S+L  ++L   N L+ +PELP  L+ L
Sbjct: 611 SLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCNNLEQIPELPSRLRLL 659



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 96/418 (22%), Positives = 152/418 (36%), Gaps = 89/418 (21%)

Query: 577 ELPSSFENLPGLEVLFVE-DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
            LP  FE     E+ ++  D   L++LP N  + + L  +    S I Q+     L + L
Sbjct: 437 HLPRDFE-FYSYELAYLHWDGYPLESLPINFHA-KNLVELSLRDSNIKQVWKGNKLHDKL 494

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFES 695
           R +D SH   L+  P      +  + +L +     R+  +    +    +L LSG     
Sbjct: 495 RVIDLSHSVHLKRIPD--FSSVPNLEILTLKGCTTRDFQKSKGDMREQRVLDLSGTAIMD 552

Query: 696 LPAIIKQMSQLRFIHLEDFNMLQSLPELPLC----LKYLHLIDCKMLQSLPVLPFCLESL 751
           LP+ I  ++ L+ + L++   L  +P   +C    LK L L  C +++       C  S 
Sbjct: 553 LPSSITHLNGLQTLLLQECLKLHQVPN-HICHLSSLKVLDLGHCNIMEGGIPSDICHLS- 610

Query: 752 DLTGCNMLRS-LPELPLC------LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSL 804
            L   N+ R     +P        L+ LNL  CN L  +PELP  L+LL     NR  S 
Sbjct: 611 SLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCNNLEQIPELPSRLRLLDAHGSNRTSSR 670

Query: 805 PEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSL 864
              L                           L S   CF +    K    +++   A   
Sbjct: 671 APFL--------------------------PLHSLVNCFSWAQDSKRTSFSDSSYHA--- 701

Query: 865 LRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLPPHS 923
                                     +G+ IVLP ++ IP+W   +S+      +LP + 
Sbjct: 702 --------------------------KGTCIVLPRTDGIPEWIMYRSTIYFTKTKLPQNW 735

Query: 924 SCRN-LIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIED 980
              N  +GFA C V              YV F ++ E     E+ H     ++   ED
Sbjct: 736 HQNNEFLGFAICCV--------------YVPFAYESEDIPEKESAHGSKNESANKSED 779


>gi|357499355|ref|XP_003619966.1| Resistance protein [Medicago truncatula]
 gi|355494981|gb|AES76184.1| Resistance protein [Medicago truncatula]
          Length = 725

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 205/599 (34%), Positives = 296/599 (49%), Gaps = 94/599 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           M+S + V +VG++G GG+GK+TLAKAI++  + +FEG CF+  VR NS T   L+HLQK+
Sbjct: 210 MESDEGVHMVGLYGTGGMGKSTLAKAIYNFVADQFEGVCFLHKVRENS-THNSLKHLQKE 268

Query: 61  MLSTT--LSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +L  T  L+ KL  A   IP   KER+ RMK+L++LDDV+++ QL+ L G LD FG GSR
Sbjct: 269 LLLKTVKLNIKLGDASEGIP-LIKERLNRMKILLILDDVDKLEQLEALAGGLDWFGHGSR 327

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRDK +L     E  + Y VNGL   EAFE     AFK    P   N      V+Y
Sbjct: 328 VIITTRDKHLLTCHGIE--RTYAVNGLHETEAFELLRWMAFKNGEVPSSYNDVLNRAVAY 385

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PLVLE++GS+L  K    W   L    +I   EI  I   LK+S++ L    +S+F
Sbjct: 386 ASGLPLVLEIVGSNLFGKSMEEWQCTLDGYEKIPNKEIQRI---LKVSYDALEEEQQSVF 442

Query: 239 LDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           LDIAC F+G    E +D +           + +L +KSL+   G  + +HD++++MG++I
Sbjct: 443 LDIACCFKGGSWIEFEDILKYHYGRCIKHHVGVLAEKSLIYQYGLSVRLHDLIEDMGKEI 502

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VRQES KEPG+RSRLW   +I  VL+ N GT  IE ++L     + + +D          
Sbjct: 503 VRQESPKEPGERSRLWCHDDIIHVLEENTGTSKIEMVYLHCPSTEPV-IDWNGKAFKKMK 561

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           +L    +               E   +SK     G  YL   LR L W  YP ++L S F
Sbjct: 562 KLKTLVI---------------ENGHFSK-----GPKYLSSCLRVLKWKGYPSKSLSSCF 601

Query: 415 KPKNLVELNL----RCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
             K    + +     C  +         C+P ++ +   L  L F  C +L +  +++ +
Sbjct: 602 LNKKFENMKVLILDYCEYL--------TCIP-NVSDLPNLEKLLFINCHNLITIHNSIGY 652

Query: 471 VCPV-TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
           +  + T+   YC  L  FP +                       L  L++L+L  C RLK
Sbjct: 653 LNKLETLIAKYCSKLESFPPLQ----------------------LASLKILELYECFRLK 690

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
                                    FPE+L KM ++K I    T I EL  SF+NL  L
Sbjct: 691 S------------------------FPELLCKMINIKEIRLSETSIRELSFSFQNLSEL 725


>gi|359493412|ref|XP_002280045.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1077

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 242/733 (33%), Positives = 350/733 (47%), Gaps = 137/733 (18%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNIP 78
           KTTLA+A++++ S +FE   F+ DV G      GL  LQ+  LS+ L EK L + G    
Sbjct: 225 KTTLARALYNEISRQFEAHSFLEDV-GKVLANEGLIKLQQIFLSSLLEEKDLNMKGLTS- 282

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K R+   K+L+VLD+VN+    + LIG  D FG+GSRI++T RDK ++         
Sbjct: 283 --IKARLHSKKVLVVLDNVNDPTIFECLIGNQDWFGRGSRIIITARDKCLI----SHGVD 336

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            Y V     +EA+E     + K      D    S S++ Y +G PL L+VL   L    K
Sbjct: 337 YYEVPKFNSDEAYEFIKCHSLKHELLRGDFMELSTSMIGYAQGLPLALKVLRPILFSMSK 396

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
                 L  L      +I ++   L+IS++ L  + K+IFLDIACFF+GEDKD+V  ILD
Sbjct: 397 EESRNQLDKLKSTLNKKIEEV---LRISYDGLDDKEKNIFLDIACFFKGEDKDYVIEILD 453

Query: 259 DSESDVL---DILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                 L     LIDKSL+SI GN   MHD++QEMG +IVRQ+S +E GKRSRL   ++I
Sbjct: 454 GCGFFPLCGIRSLIDKSLISIYGNKFQMHDLIQEMGLEIVRQQSLQELGKRSRLLFHEDI 513

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIK-GINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
             VLK N G++ IEGIFL+L  ++  I+   +AF  M+       Y              
Sbjct: 514 YDVLKKNTGSEKIEGIFLNLFHLQETIDFTTQAFAGMN------LY-------------- 553

Query: 375 TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
                                         Y L++LP++F  KNLV L++ CS++EQ W+
Sbjct: 554 -----------------------------GYSLKSLPNDFNAKNLVHLSMPCSRIEQLWK 584

Query: 435 GEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
           G            K L  L                      ++ S+   LIE P +S +V
Sbjct: 585 G-----------IKVLEKLK--------------------RMDLSHSKYLIETPNLS-RV 612

Query: 495 T---RLYLGQS-AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
           T   RL L    ++ +V  S+  L +L+ L L+ CK LK + +    L+SL  LIL GC 
Sbjct: 613 TNLERLVLEDCVSLCKVHPSLRDLKNLKFLSLKNCKMLKSLPSGPYDLKSLEILILSGCS 672

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
             E F E    +E LK +Y+D T + ELPSS      L +L +E C              
Sbjct: 673 KFEQFLENFGNLEMLKELYADGTALRELPSSLSLSRNLVILSLEGCKG------------ 720

Query: 611 YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHIS--DY 668
                          P S +     RS +S+       F    L GL ++  L++S  + 
Sbjct: 721 ---------------PPSASWWFPRRSSNST------GFRLHNLSGLCSLSTLNLSYCNL 759

Query: 669 AVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLK 728
           +       +  LSSLE L+L GNNF +LP  + ++S+L  + LE+   LQ LP+LP  + 
Sbjct: 760 SDETNLSSLVLLSSLEYLHLCGNNFVTLPN-LSRLSRLEDVQLENCTRLQELPDLPSSIG 818

Query: 729 YLHLIDCKMLQSL 741
            L   +C  L+++
Sbjct: 819 LLDARNCTSLKNV 831



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 151/393 (38%), Gaps = 79/393 (20%)

Query: 549 CLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
           C  +E   + ++ +E LKR+  S    + E P+    +  LE L +EDC  L  +  ++ 
Sbjct: 576 CSRIEQLWKGIKVLEKLKRMDLSHSKYLIETPN-LSRVTNLERLVLEDCVSLCKVHPSLR 634

Query: 608 SLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHIS 666
            L+ L ++ L     +  LPS       L  L  S C   E F   F   L  +  L+  
Sbjct: 635 DLKNLKFLSLKNCKMLKSLPSGPYDLKSLEILILSGCSKFEQFLENFG-NLEMLKELYAD 693

Query: 667 DYAVREIPQEIAYLSSLEILYLSGNNFESLPA--IIKQMSQLRFIHLEDFNMLQSLPELP 724
             A+RE+P  ++   +L IL L G       +    ++ S      L + + L SL  L 
Sbjct: 694 GTALRELPSSLSLSRNLVILSLEGCKGPPSASWWFPRRSSNSTGFRLHNLSGLCSLSTLN 753

Query: 725 LCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLP 784
           L   Y +L D +   S  VL   LE L L G N + +LP L    +   LED  +     
Sbjct: 754 L--SYCNLSD-ETNLSSLVLLSSLEYLHLCGNNFV-TLPNLS---RLSRLEDVQL----- 801

Query: 785 ELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFE 844
                       NC RLQ LP++   +  LDA                            
Sbjct: 802 -----------ENCTRLQELPDLPSSIGLLDAR--------------------------- 823

Query: 845 FTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPD 904
             NC  L           S L+ R + + +L LG                 + PGS +PD
Sbjct: 824 --NCTSLKN-------VQSHLKNRVIRVLNLVLGL--------------YTLTPGSRLPD 860

Query: 905 WFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
           W   +SSG  +  +LPP+    N +GF F  V+
Sbjct: 861 WIRYKSSGMEVIAELPPNWFNSNFLGFWFAIVV 893


>gi|357513713|ref|XP_003627145.1| NBS resistance protein [Medicago truncatula]
 gi|355521167|gb|AET01621.1| NBS resistance protein [Medicago truncatula]
          Length = 1108

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 221/690 (32%), Positives = 340/690 (49%), Gaps = 91/690 (13%)

Query: 10  VGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV-RGNSETAGGLEHLQKQMLSTTLSE 68
           +GIWGM G+GKTT+A+ +F +    F+ SCF+  + +G  E   GL +L+ ++L+  L +
Sbjct: 212 IGIWGMDGLGKTTIARQMFSKHFMHFDSSCFLESISQGLKEF--GLPYLRDKLLNDLLKQ 269

Query: 69  KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRV 128
           K  +   +    + +RV      IVLDDV+   QL  L GEL+     SRI++TT+++  
Sbjct: 270 K--IITSDFHGISGKRV-----FIVLDDVDNGMQLDYLCGELNDLAPNSRIIITTKNRDT 322

Query: 129 LEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEV 188
           L    G   +IY V   +F+E+ E FC  AFK+ H        S   V+  +G PL L+V
Sbjct: 323 L---NGRVDEIYEVEKWKFKESLELFCLAAFKQKHPKVGYERLSERAVACARGVPLALKV 379

Query: 189 LGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGE 248
           LGS L  +    W   L+ L+   ES + +I D+L++S+N L    K +FLDIA FF+ E
Sbjct: 380 LGSHLHSRNLEFWEFELNYLDSKGES-LCEIQDMLRVSYNGLKAPEKEMFLDIAFFFKDE 438

Query: 249 DKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGRQIV---RQESEK 301
           +KDFV SILD    D    + IL DK+L++IS  N + MHD+ Q++   IV   + +  +
Sbjct: 439 NKDFVTSILDACGFDATSGIHILKDKALITISNDNKIQMHDLHQKLAFDIVQYKKDQRRR 498

Query: 302 EPGKRSRLWDPKEISRVLKHNKGT-DAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
           +P K SRL D +E+  +LK+NKGT + IEGI  DL++   +++    F  ++ LR  + +
Sbjct: 499 DPRKCSRLRDIEEVCGLLKNNKGTHNKIEGITFDLTQKVDLHIQDDTFNLITKLRFLRLH 558

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
           VP     ++L ++   +Q          G+     KLRYL W  YP ++LP  F  + LV
Sbjct: 559 VP--LGKKRLTNLYHPDQ----------GIMPFCDKLRYLEWYGYPSKSLPQPFCAELLV 606

Query: 421 ELNLRCSKVEQPWEGEKACVP---------------SSIQNFKYLSALSFKGCQSLRSF- 464
           E+ L  S VE  W G +  V                  +     L  L   GC+SL    
Sbjct: 607 EIRLPHSHVEHLWYGIQELVNLEGIDLTECKQLVELPDLSKATRLKWLFLSGCESLSEVH 666

Query: 465 PSNLHFVCPVT-----------------------INFSYCVNLIEFPQISGKVTRLYLGQ 501
           PS  H    VT                       I+ + C +LIEF   S  +  L L  
Sbjct: 667 PSTFHNDTLVTLLLDRCKKLENLVCEKHLTSLKNIDVNGCSSLIEFSLSSDSIEGLDLSN 726

Query: 502 SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
           + ++ +  SI  +++   L+L+G  RL+ +      LRSL  L +  C        ++ K
Sbjct: 727 TMVKTLHPSIGRMSNFSWLNLQGL-RLQNVPKELSHLRSLTQLWISNC-------SVVTK 778

Query: 562 MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASA 621
                   S    I E  +  E+L  L+ L ++DC  L  LP NI SL +LY +    S 
Sbjct: 779 --------SKLEEIFECHNGLESL--LKTLVLKDCCNLFELPTNIDSLSFLYELRLDGSN 828

Query: 622 ISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
           +  LP+++   + L  L  ++CK L S P+
Sbjct: 829 VKMLPTNIKYLSNLTILSLNNCKMLVSLPQ 858



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 140/571 (24%), Positives = 230/571 (40%), Gaps = 124/571 (21%)

Query: 494  VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
            +  + L  S +E +   I+ L +LE +DL  CK+L  +     K   L  L L GC    
Sbjct: 605  LVEIRLPHSHVEHLWYGIQELVNLEGIDLTECKQLVELP-DLSKATRLKWLFLSGC---- 659

Query: 554  HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNL--PDNIGSLEY 611
                     E L  ++         PS+F N   L  L ++ C KL+NL    ++ SL+ 
Sbjct: 660  ---------ESLSEVH---------PSTFHN-DTLVTLLLDRCKKLENLVCEKHLTSLKN 700

Query: 612  LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR 671
            +       +  S L      S+ +  LD S+       P   +  +S    L++    ++
Sbjct: 701  I-----DVNGCSSLIEFSLSSDSIEGLDLSNTMVKTLHPS--IGRMSNFSWLNLQGLRLQ 753

Query: 672  EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
             +P+E+++L SL  L++S          +   S+L  I  E  N L+SL      LK L 
Sbjct: 754  NVPKELSHLRSLTQLWISN-------CSVVTKSKLEEI-FECHNGLESL------LKTLV 799

Query: 732  LIDCKMLQSLPV----LPFCLE-SLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPEL 786
            L DC  L  LP     L F  E  LD +   ML +  +    L  L+L +C ML SLP+L
Sbjct: 800  LKDCCNLFELPTNIDSLSFLYELRLDGSNVKMLPTNIKYLSNLTILSLNNCKMLVSLPQL 859

Query: 787  PLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFT 846
            P  ++ L   NC  L            ++ S L+ +SKH         +     I F+  
Sbjct: 860  PEHIKELRAENCTSL------------VEVSTLKTMSKH--------RNGDEKYISFKNG 899

Query: 847  NCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELR-----GSLIVLPGSE 901
              L+ N  + N+I  D++L I+ +A+      Y + ++++ SE+        ++ LPGS 
Sbjct: 900  KMLESNELSLNRITEDTILVIKSVAL------YNVLVDKRCSEIHSYNYDSVVVCLPGSR 953

Query: 902  IPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL-----------DSKKVDSDCFRYF 950
            IP     ++S S + I     S     +GF F  V+              K+   C+R  
Sbjct: 954  IPSQLKYKTSDSKLTIGF---SDIYYSLGFIFAVVVSPSSGMKNERGSGAKIQCKCYR-- 1008

Query: 951  YVSFQFDLEIKTLSETKHVDLGYNSRYIEDLI---DSDRVILGFKPCLNVGFPDGYHHTI 1007
                                +G +S +  ++I   D D V + + P   +G         
Sbjct: 1009 ---------------EDGSQVGVSSEWHNEVITNLDMDHVFVWYDP-YRIGIIQYISEGN 1052

Query: 1008 ATFKFFAERK------FYKIKRCGLCPVYAN 1032
             +F+F           F  +K CG+CP+Y +
Sbjct: 1053 VSFEFNVTNDSEEQDCFLSVKGCGICPIYTS 1083


>gi|227438191|gb|ACP30585.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1301

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 224/704 (31%), Positives = 330/704 (46%), Gaps = 123/704 (17%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV---------RGNSETAGGL 54
           S+ V++VGIWG  GIGKTT+A+A+F + S  F+ S FV  V         RG +     +
Sbjct: 206 SEEVRMVGIWGPSGIGKTTIARALFSRLSRRFQSSAFVDKVFISKNMDVYRGANLGDYNM 265

Query: 55  E-HLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
           + HLQ+  L+    E L+     I H    ++ +R  K LI +DD+++   L  L G   
Sbjct: 266 KLHLQRAFLA----ELLDNRDIKIDHIGAVEKMLRHRKALIFIDDLDDQDVLDALAGRTQ 321

Query: 112 QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH 171
            FG GSRI+V T+DK  L     +   IY V     + A E FC  AF+ N  P+     
Sbjct: 322 WFGSGSRIIVVTKDKHFLRAHGIDH--IYEVCLPSKDLALEIFCRSAFRRNSPPDGFMEL 379

Query: 172 SRSVVSYTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL 230
           +  VV +  GN PL L+VLGS+L  + K  W   L  L R+  S    I   L+ S++ L
Sbjct: 380 ASEVV-FCAGNLPLGLDVLGSNLRGRDKEDW---LDMLPRLRTSLDRKIERTLRASYDGL 435

Query: 231 T-PRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDI 286
              + K+IF  +AC F G   D +  +L+D   DV   L  L+DKSL+    N + MH +
Sbjct: 436 NNKKDKAIFRHVACLFSGRKVDHIKLLLEDRNLDVNIGLKNLVDKSLIHERFNTVEMHSL 495

Query: 287 LQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR 346
           LQEMG++IVR +S+ EPG+R  L D K+I  VL+ N GT  + GI L + +   +++   
Sbjct: 496 LQEMGKEIVRAQSD-EPGEREFLMDSKDIWDVLEDNTGTKRVLGIELIMDETDELHVHEN 554

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           AF  M NLR  + +                   +  ++ LP   DYLP  LR L W  YP
Sbjct: 555 AFKGMCNLRFLEIF-----------------GCNVVRLHLPKNFDYLPPSLRLLSWHGYP 597

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEG------------------------------E 436
           +R +PS F+P+NL++L +R   +E+ WEG                              E
Sbjct: 598 MRCMPSKFQPENLIKLVMRAGNLEKLWEGVASLTCLKEIDLTLSVNLKEIPDLSKAMNLE 657

Query: 437 KAC---------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEF 487
           + C         +PSSI+N K L  L    C +L + P+ ++         S C  L  F
Sbjct: 658 RLCLDFCSSLLELPSSIRNLKKLRDLEMNFCTNLETIPTGIYLNSFEGFVLSGCSRLRRF 717

Query: 488 PQISGKV----------------------------------TRLYLGQ-SAIEEVPSSIE 512
           P+I   +                                  TRL L +  ++ E+PSS +
Sbjct: 718 PEILTNISESPSYLTLDVLNMTNLRSENLWEGVQQPFTTLMTRLQLSEIPSLVELPSSFQ 777

Query: 513 CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR 572
            L  L+ LD+R C  L+ + T    L+SL  L+L GC  L  FP I   +++LK  +S  
Sbjct: 778 NLNKLKWLDIRNCINLETLPTGI-NLQSLEYLVLSGCSRLRSFPNISRNIQYLKLSFS-- 834

Query: 573 TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
             I E+P   E    L+ L + +C+ L  +  NI  L++L   L
Sbjct: 835 -AIEEVPWWVEKFSALKDLNMANCTNLRRISLNILKLKHLKVAL 877



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 105/458 (22%), Positives = 188/458 (41%), Gaps = 59/458 (12%)

Query: 599  LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
            L  +PD   ++      L   S++ +LPSS+     LR L+ + C  LE+ P    L  S
Sbjct: 644  LKEIPDLSKAMNLERLCLDFCSSLLELPSSIRNLKKLRDLEMNFCTNLETIPTGIYLN-S 702

Query: 659  AMGLLHISDYAVREIPQEIAYLS------SLEILYLSGNNFESLPAIIKQMSQLRFIHLE 712
              G +      +R  P+ +  +S      +L++L ++    E+L   ++Q        L+
Sbjct: 703  FEGFVLSGCSRLRRFPEILTNISESPSYLTLDVLNMTNLRSENLWEGVQQPFTTLMTRLQ 762

Query: 713  DFNMLQSLPELPLC------LKYLHLIDCKMLQSLP--VLPFCLESLDLTGCNMLRSLPE 764
              + + SL ELP        LK+L + +C  L++LP  +    LE L L+GC+ LRS P 
Sbjct: 763  -LSEIPSLVELPSSFQNLNKLKWLDIRNCINLETLPTGINLQSLEYLVLSGCSRLRSFPN 821

Query: 765  LPLCLQYLNLEDCNMLRSLPELPL------CLQLLTVRNCNRLQSLPEILLCLQELDASV 818
            +   +QYL L       ++ E+P        L+ L + NC  L+ +   +L L+ L  ++
Sbjct: 822  ISRNIQYLKLS----FSAIEEVPWWVEKFSALKDLNMANCTNLRRISLNILKLKHLKVAL 877

Query: 819  LEKLSKHSPDLQW--APESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIAS-L 875
                   + +  W  +P  L  A      +             L D  + I H+      
Sbjct: 878  FSNCGALT-EANWDDSPSILAIATDTIHSS-------------LPDRYVSIAHLDFTGCF 923

Query: 876  RLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSIC-IQLPPHSSCRNLIGFAFC 934
             L ++    ++   +R   ++L G  +P +F+++++G+S+  I LP  S  +  +    C
Sbjct: 924  NLDHKDLFQQQTVFMR---VILSGEVVPSYFTHRNNGTSLTNIPLPHISPSQPFLRLKAC 980

Query: 935  AVLDSKKVD------SDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVI 988
            A+ D             CFR+  +S      +    E     LG +    +    S++ I
Sbjct: 981  ALFDIATFSFHSFNIQVCFRFIDISGNHFDYVDVQPEFSTSRLGGHLVIFDSCFPSNKDI 1040

Query: 989  LGFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGL 1026
                  LN      Y H    F+   E    ++K CG+
Sbjct: 1041 TLLSDQLN------YDHIDIQFRLIEEDYELQLKGCGI 1072



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 5/125 (4%)

Query: 440 VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
           +PSS QN   L  L  + C +L + P+ ++      +  S C  L  FP IS  +  L L
Sbjct: 772 LPSSFQNLNKLKWLDIRNCINLETLPTGINLQSLEYLVLSGCSRLRSFPNISRNIQYLKL 831

Query: 500 GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC-----LNLEH 554
             SAIEEVP  +E  + L+ L++  C  L+RIS +  KL+ L   +   C      N + 
Sbjct: 832 SFSAIEEVPWWVEKFSALKDLNMANCTNLRRISLNILKLKHLKVALFSNCGALTEANWDD 891

Query: 555 FPEIL 559
            P IL
Sbjct: 892 SPSIL 896


>gi|227438225|gb|ACP30602.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 938

 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 184/571 (32%), Positives = 285/571 (49%), Gaps = 55/571 (9%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-----LQ 58
           S+ V+++GI+G  GIGKTT A+ +++Q SH F  S F+ D+RG+ E   G ++     LQ
Sbjct: 208 SELVKVIGIFGPAGIGKTTTARVLYNQLSHAFPFSTFLEDIRGSYEKPCGNDYRLKLRLQ 267

Query: 59  KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           K +L    ++    +   + H    +E +   K+L+VLD+V+   QL+ +  +    G G
Sbjct: 268 KNLLCQIFNQ----SDIEVRHLRGAQEMLSDKKVLVVLDEVDNWWQLEEMAKQPGWVGPG 323

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           S I++TT D+++L+        IY++N    +E+ + FC +AF +    +     +R V 
Sbjct: 324 SMIIITTEDRKLLKALGLGSDHIYKMNFPTEDESLQIFCQYAFGQKSPDDGFESLAREVT 383

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
                 PL L V+GS L    K  W + L  L    + EI      L+ S++ L    K+
Sbjct: 384 WLVGDLPLGLRVMGSYLRGMSKDEWIEALPWLRSTLDREIEST---LRFSYDALRDNEKT 440

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF--LNMHDILQEMG 291
           +FL +AC F G     + S   +S  +V   L++L  KSL++I      ++MH +LQ+MG
Sbjct: 441 LFLHVACLFGGFYASSIKSYFANSSLEVNHGLEVLAQKSLITIDHKHERVHMHILLQQMG 500

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IV+++  + PGKR  LWD K+IS VL  +  T  + GI    +  + I ++  AF  M
Sbjct: 501 REIVKKQCTENPGKRQFLWDTKDISHVLDEDTATGNVLGINTTWTG-EEIQINKSAFQGM 559

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
           +NL+    +                   SYS +  P GLD LP KL  LHWD  PLR  P
Sbjct: 560 NNLQFLLLF-------------------SYSTIHTPEGLDCLPDKLILLHWDRSPLRIWP 600

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEK--ACVPS-------------SIQNFKYLSALSFK 456
           S F  K LVEL ++ SK E  WEG K  +C+ +              +     L  L   
Sbjct: 601 STFSGKCLVELRMQNSKFEMLWEGIKPLSCLRTLDLSSSWDLKKIPDLSKATSLEVLQLG 660

Query: 457 GCQSLRSFPSNLHFVCPVT-INFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT 515
            C+SL    S++     +  +N S C  + +FP +   +  L L  + I++VP  IE L 
Sbjct: 661 DCRSLLELTSSISSATKLCYLNISRCTKIKDFPNVPDSIDVLVLSHTGIKDVPPWIENLF 720

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLIL 546
            L  L + GCK+LK IS +  KL +L  L L
Sbjct: 721 RLRKLIMNGCKKLKTISPNISKLENLEFLAL 751



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 160/410 (39%), Gaps = 101/410 (24%)

Query: 554 HFPEILEKM-EHLKRIYSDRTPITELPSSF-------------------ENLPGLEVLFV 593
           H PE L+ + + L  ++ DR+P+   PS+F                   E +  L  L  
Sbjct: 574 HTPEGLDCLPDKLILLHWDRSPLRIWPSTFSGKCLVELRMQNSKFEMLWEGIKPLSCLRT 633

Query: 594 EDCSK---LDNLPD--NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
            D S    L  +PD     SLE L   L    ++ +L SS++ +  L  L+ S C  ++ 
Sbjct: 634 LDLSSSWDLKKIPDLSKATSLEVLQ--LGDCRSLLELTSSISSATKLCYLNISRCTKIKD 691

Query: 649 FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLR 707
           FP        ++ +L +S   ++++P  I  L  L  L ++G    +++   I ++  L 
Sbjct: 692 FPNV----PDSIDVLVLSHTGIKDVPPWIENLFRLRKLIMNGCKKLKTISPNISKLENLE 747

Query: 708 FIHLEDF------NMLQSLPELPLCLKYLHLI----DCKMLQSLP-------VLPFCLES 750
           F+ L ++         +   E+  C+ +  +I    DCK    L        +LP CL  
Sbjct: 748 FLALNNYLFCAYAYAYEDDQEVDDCV-FEAIIEWGDDCKHSWILRSDFKVDYILPICLPE 806

Query: 751 LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLT---VRNCNRLQSLPEI 807
              T          + LCL+         ++++P+    L  LT   V+ C RL +LP +
Sbjct: 807 KAFTS--------PISLCLRSYG------IKTIPDCIGRLSGLTKLDVKECRRLVALPPL 852

Query: 808 LLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRI 867
              L  LDA   E L +          S ++  IC  F  C+ L  KA   I   +    
Sbjct: 853 PDSLLYLDAQGCESLKRID------SSSFQNPEICMNFAYCINLKQKARKLIQTSAC--- 903

Query: 868 RHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICI 917
                                       VLPG E+P  F++++S SS+ I
Sbjct: 904 -------------------------KYAVLPGEEVPAHFTHRASSSSLTI 928


>gi|37654137|emb|CAD56833.1| putative resistance gene analogue protein [Lens culinaris]
          Length = 810

 Score =  266 bits (681), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 204/552 (36%), Positives = 287/552 (51%), Gaps = 44/552 (7%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST-TLSEKLEVAGPNIP 78
           KTT+A++++D    EF+ SCF++D+R       GL  +Q ++LS  T+         +  
Sbjct: 280 KTTIARSVYDAIKDEFQVSCFLADIRETISRTNGLVRIQTELLSHLTIRSNDFYNIHDGK 339

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
                  R  K+L+VLDDV+E+ QL+ L G+ + FG G R+++T+RDK +L      E  
Sbjct: 340 KILANSFRNKKVLLVLDDVSELSQLESLAGKQEWFGSGIRVIITSRDKHLLMTHGVNE-- 397

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            Y+  GL   EA + FC  AFK+N   E+     + VV Y +G PL LEVLGS    +  
Sbjct: 398 TYKAKGLVKNEALKLFCLKAFKQNQPKEEYLSLCKEVVEYARGLPLALEVLGSHFHGRTV 457

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             W   L  +  +  S+IHD    LKIS++ L P  +++FLDIACFF+G D D V  IL+
Sbjct: 458 EVWHSALEQMRNVPHSKIHDT---LKISYDSLQPMERNMFLDIACFFKGMDIDGVMEILE 514

Query: 259 DS---ESDVLDILIDKSLVSI--SGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           D        +DILI++SLVS       L MHD+L+EMGR IV QES  +PGKRSRLW  K
Sbjct: 515 DCGYYPKIGIDILIERSLVSFDRGDRKLWMHDLLEEMGRNIVCQESPNDPGKRSRLWSQK 574

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           +I +VL  NKGTD I+GI L+L +      +  AF+ +S LRL      K  EI KLP  
Sbjct: 575 DIDQVLTKNKGTDKIQGIALNLVQPYEAGWNIEAFSRLSQLRLL-----KLCEI-KLPRG 628

Query: 374 STEEQLSYSKV------QLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCS 427
           S  E LS S +      +   GL   P  L+ L W   PL+T P       +V L L  S
Sbjct: 629 SRHE-LSASPLGTQYVNKTSRGLGCFPSSLKVLDWRGCPLKTPPQTNHFDEIVNLKLFHS 687

Query: 428 KVEQ--PWEGEKACVPSSIQNFKYLSALSFKGCQS--LRSFPSNLHFVCPVTINFSYCV- 482
           K+E+   W   K  + S  Q F  L    +    S  L  F  NL     + ++FS C+ 
Sbjct: 688 KIEKTLAWNTGKDSINSLFQ-FMLLKLFKYHPNNSSILIMFLENLK---SINLSFSKCLT 743

Query: 483 ---NLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
              + +  P +   V     G +++ E+  S+     L +L+L+ CKRLK +    CK+ 
Sbjct: 744 RSPDFVGVPNLESLVLE---GCTSLTEIHPSLLSHKTLILLNLKDCKRLKALP---CKIE 797

Query: 540 --SLVTLILLGC 549
             SL  L L GC
Sbjct: 798 TSSLKCLSLSGC 809


>gi|40846341|gb|AAR92462.1| SNC1-like protein [Arabidopsis thaliana]
          Length = 1052

 Score =  266 bits (681), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 219/739 (29%), Positives = 358/739 (48%), Gaps = 60/739 (8%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQKQML 62
           S   ++VGIWG  GIGK+T+ +A++ Q S +F    FV+      S+ +G     +K++L
Sbjct: 201 SKEARMVGIWGQSGIGKSTIGRALYSQLSIQFHHRAFVTYKSTSGSDVSGMKLSWEKELL 260

Query: 63  STTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           S  LS+K       I HF   ++R++  K+LI+LDDV+ +  LK L+G+ + FG GSRI+
Sbjct: 261 SEILSQK----DIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRII 316

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           V T+D++ L+    +   +Y V       A    C  AF ++  P+D    +  V     
Sbjct: 317 VITQDRQFLKAH--DIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDDFRDLAAKVAKLAG 374

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
             PL L VLGSSL  + K  W ++L +L         DI   L++S+ +L P+ + +F  
Sbjct: 375 NLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLN---RDIMKTLRVSYVRLDPKDQDMFHY 431

Query: 241 IACFFEGEDKDFVASILDDSESD--VLDILIDKSLVSISGN-FLNMHDILQEMGRQIVRQ 297
           IAC F G +   +   L D+ +    L  L DKSL+ I+ +  + MH +++++  +I R+
Sbjct: 432 IACLFNGFEVKSIKDFLGDAVNVNIRLKTLHDKSLIRITPDEIVEMHTLVEKLATEIDRE 491

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-----INLDPRAFTNMS 352
           ES+  PG R  L + +EI  V     GT+ + GI+   S          ++D  +F  M 
Sbjct: 492 ESKGNPGNRRFLKNAEEILDVFSDKTGTEKLLGIYFSASTDPWNDKPFFSIDENSFQGML 551

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NL+    +    +   +            ++++LPNGL YLP+KL++L W+  PL+ LPS
Sbjct: 552 NLQYLGIHDHSMWYPRE------------TRLRLPNGLVYLPRKLKWLWWNDCPLKRLPS 599

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY---------------LSALSFKG 457
           NFK + LVEL +  S +E+ W+G ++       N +Y               L  L    
Sbjct: 600 NFKAEYLVELIMVNSDLEKLWDGTQSLGSLKEMNLRYSTNLKEIPDLSLAINLERLDISD 659

Query: 458 CQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDL 517
           C+ L SFP+ L+      +N + C NL  FP I    + +   Q   E      +C  + 
Sbjct: 660 CEVLESFPTPLNSESLAYLNLTGCPNLRNFPAIKMGCSNVDFLQ---ERKIVVKDCFWNK 716

Query: 518 EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPIT 576
            +L L     L+R +    +   L  L L G   LE   E ++ +E L  +  S+   +T
Sbjct: 717 NLLGLDYLDCLRRCNPRKFRPEHLKDLTLRGNNKLEKLWEGVQSLESLVTMDLSECENLT 776

Query: 577 ELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY-YILAAASAISQLPSSVALSNML 635
           E+P        LE L + +C  L  LP  IG+L+ L  + +   + +  LP++V LS+ L
Sbjct: 777 EIP-DLSKATNLENLKLNNCKSLVTLPTTIGNLQKLVRFEMKECTGLEVLPTAVNLSS-L 834

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFES 695
           + LD   C  L +FP    L  + +  L++ + A+ E+P  I   S L +L +     + 
Sbjct: 835 KILDLGGCSSLRTFP----LISTNIVWLYLENTAIEEVPCCIENFSGLNVLLMYC--CQR 888

Query: 696 LPAIIKQMSQLRFIHLEDF 714
           L  I   + +LR +   DF
Sbjct: 889 LKNISPNIFRLRSLFFADF 907



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 85/201 (42%), Gaps = 50/201 (24%)

Query: 389 GLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCS-KVEQPWEGEKA--------- 438
           GLDYL   LR         R  P  F+P++L +L LR + K+E+ WEG ++         
Sbjct: 720 GLDYL-DCLR---------RCNPRKFRPEHLKDLTLRGNNKLEKLWEGVQSLESLVTMDL 769

Query: 439 ------------------------------CVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
                                          +P++I N + L     K C  L   P+ +
Sbjct: 770 SECENLTEIPDLSKATNLENLKLNNCKSLVTLPTTIGNLQKLVRFEMKECTGLEVLPTAV 829

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
           +      ++   C +L  FP IS  +  LYL  +AIEEVP  IE  + L VL +  C+RL
Sbjct: 830 NLSSLKILDLGGCSSLRTFPLISTNIVWLYLENTAIEEVPCCIENFSGLNVLLMYCCQRL 889

Query: 529 KRISTSFCKLRSLVTLILLGC 549
           K IS +  +LRSL       C
Sbjct: 890 KNISPNIFRLRSLFFADFTNC 910



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 111/476 (23%), Positives = 191/476 (40%), Gaps = 112/476 (23%)

Query: 565  LKRIYSDRTPITELPSSFENLPGLEVLFVE-DCSKLDNLPDNIGSLEYLYYILAAASAIS 623
            LK ++ +  P+  LPS+F+    +E++ V  D  KL +   ++GSL+ +   L  ++ + 
Sbjct: 584  LKWLWWNDCPLKRLPSNFKAEYLVELIMVNSDLEKLWDGTQSLGSLKEMN--LRYSTNLK 641

Query: 624  QLPSSVALSNMLRSLDSSHCKGLESFP-------------------RTF---LLGLSAMG 661
            ++P  ++L+  L  LD S C+ LESFP                   R F    +G S + 
Sbjct: 642  EIPD-LSLAINLERLDISDCEVLESFPTPLNSESLAYLNLTGCPNLRNFPAIKMGCSNVD 700

Query: 662  LLHISDYAVREIPQE-----IAYLS-------------SLEILYLSGNN-FESLPAIIKQ 702
             L      V++         + YL               L+ L L GNN  E L   ++ 
Sbjct: 701  FLQERKIVVKDCFWNKNLLGLDYLDCLRRCNPRKFRPEHLKDLTLRGNNKLEKLWEGVQS 760

Query: 703  MSQLRFIHLEDFNMLQSLPELPLC--LKYLHLIDCKMLQSLP------------------ 742
            +  L  + L +   L  +P+L     L+ L L +CK L +LP                  
Sbjct: 761  LESLVTMDLSECENLTEIPDLSKATNLENLKLNNCKSLVTLPTTIGNLQKLVRFEMKECT 820

Query: 743  ---VLPFC-----LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLC----- 789
               VLP       L+ LDL GC+ LR+ P +   + +L LE+     ++ E+P C     
Sbjct: 821  GLEVLPTAVNLSSLKILDLGGCSSLRTFPLISTNIVWLYLENT----AIEEVPCCIENFS 876

Query: 790  -LQLLTVRNCNRLQSLPEILLCLQEL----------------DASVLEKLSKHSPDLQWA 832
             L +L +  C RL+++   +  L+ L                DA+V+  +  H   +   
Sbjct: 877  GLNVLLMYCCQRLKNISPNIFRLRSLFFADFTNCRGVIKALSDATVVATMEDH---VSCV 933

Query: 833  PESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIA--------SLRLGYEMAIN 884
            P S      C  F +     G   ++   +         +         S R  +++  +
Sbjct: 934  PLSENIEYTCERFWDAFYDEGYLIDENDDNDENDDLEYLVDWEFEGENFSFRNCFKLERD 993

Query: 885  EKLSELRGSL--IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLD 938
             +   LR     + LPG EIP +F+ ++SG S+ + LP  S  +    F  C V++
Sbjct: 994  ARELILRSCFKPVALPGGEIPKYFTYRASGDSLTVTLPQSSLSQEFKRFKACVVVE 1049


>gi|357500105|ref|XP_003620341.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495356|gb|AES76559.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1047

 Score =  266 bits (681), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 217/651 (33%), Positives = 325/651 (49%), Gaps = 72/651 (11%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S     +VG++G GG+GK+TL KAI++  + EFE SCF+ +VR NS  +  L+HLQ+++L
Sbjct: 214 SDHGAHMVGLYGTGGLGKSTLGKAIYNFIADEFECSCFLENVRENS-ASNKLKHLQEELL 272

Query: 63  STTLSEKLEVAG--PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             TL  ++++ G    I H  KER+   K+L++LDDV+++ QL+ L GE D FG GSR++
Sbjct: 273 LKTLQLEIKLGGVSEGISHI-KERLHSKKILLILDDVDDMEQLQALAGEPDWFGLGSRVI 331

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK +L     E    + V GL   EA E     AFK N  P          VSY  
Sbjct: 332 ITTRDKHLLRSHGIE--STHEVEGLYGTEALELLRWMAFKNNKVPSSYEDVLNRAVSYAS 389

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PLVLE++GS+L  K    W   L    +I   +IH+I   LK+S++ L    +S+FLD
Sbjct: 390 GLPLVLEIVGSNLFGKTIEEWKGTLDGYEKIPNKKIHEI---LKVSYDALEEEQQSVFLD 446

Query: 241 IACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSI------SGNFLNMHDILQEM 290
           IAC F+G    E +  + +      +  L +L +KSLV I      S N L +HD+++EM
Sbjct: 447 IACCFKGCGWKEFEYILRAHYGHRITHHLVVLAEKSLVKITHPHYGSINELTLHDLIKEM 506

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL-SKIKGINLDPRAFT 349
           G+++VRQES KEPG+RSRLW   +I  VLK N GT  IE I+++  S+   I+   +AF 
Sbjct: 507 GKEVVRQESPKEPGERSRLWCEDDIVNVLKENTGTSKIEMIYMNFPSEEFVIDKKGKAFK 566

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHW-----DT 404
            M+ L+                       L    V    GL YLP  LR L       ++
Sbjct: 567 KMTRLK----------------------TLIIENVHFSKGLKYLPSSLRVLKLRGCLSES 604

Query: 405 YPLRTLPSNFKPKNLVELNLRC---------------SKVEQPWEGEKACVPSSIQNFKY 449
               +L   F+   ++ L+ RC                K    +      + +SI +   
Sbjct: 605 LISCSLSKKFQNMKILTLD-RCEYLTHIPDVSGLQNLEKFSFEYCENLITIHNSIGHLNK 663

Query: 450 LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL---YLGQSAIEE 506
           L  LS  GC  L  FP  L       +N SYC +L  FP++  K+T +   +L +++I E
Sbjct: 664 LERLSANGCSKLERFPP-LGLASLNELNISYCESLKSFPKLLCKMTNMKMIWLQKTSIRE 722

Query: 507 VPSSIECLTDLEVLDLRGCKRL---KRISTSFCKLRSLVT-LILLGC-LNLEHFPEILEK 561
           +PSS + L +L +L L  C  L   K+    +  + S VT LIL  C L+ E  P  L+ 
Sbjct: 723 LPSSFQNLNELFLLTLWECGMLRFPKQNDQMYSIVFSKVTNLILHDCKLSDECLPIFLKW 782

Query: 562 MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
             ++  +         +P        L +L +++C  L+ +     +LE L
Sbjct: 783 CVNVTSLDLSYNNFKLIPECLSECHLLNILILDNCKSLEEIRGIPPNLEML 833



 Score = 51.2 bits (121), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 113/277 (40%), Gaps = 34/277 (12%)

Query: 515 TDLEVLDLRGCKRLKRISTSFCK-LRSLVTLILLGCLNLEHFPEI--LEKMEHLKRIYSD 571
           + L VL LRGC     IS S  K  +++  L L  C  L H P++  L+ +E     Y +
Sbjct: 590 SSLRVLKLRGCLSESLISCSLSKKFQNMKILTLDRCEYLTHIPDVSGLQNLEKFSFEYCE 649

Query: 572 RTPITELPSSFENLPGLEVLFVEDCSKLDNLPD---------NIGSLEYLY--------- 613
              +  + +S  +L  LE L    CSKL+  P          NI   E L          
Sbjct: 650 N--LITIHNSIGHLNKLERLSANGCSKLERFPPLGLASLNELNISYCESLKSFPKLLCKM 707

Query: 614 ----YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR------TFLLGLSAMGLL 663
                I    ++I +LPSS    N L  L    C G+  FP+      + +       +L
Sbjct: 708 TNMKMIWLQKTSIRELPSSFQNLNELFLLTLWEC-GMLRFPKQNDQMYSIVFSKVTNLIL 766

Query: 664 HISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL 723
           H    +   +P  + +  ++  L LS NNF+ +P  + +   L  + L++   L+ +  +
Sbjct: 767 HDCKLSDECLPIFLKWCVNVTSLDLSYNNFKLIPECLSECHLLNILILDNCKSLEEIRGI 826

Query: 724 PLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLR 760
           P  L+ L  + CK L S        + L   GC + R
Sbjct: 827 PPNLEMLSAMGCKSLSSSSRRMLLSQKLHEAGCILFR 863


>gi|334186702|ref|NP_001190772.1| P-loop NTPase and Toll/interleukin-1 receptor (TIR) homology domain
           protein [Arabidopsis thaliana]
 gi|332658791|gb|AEE84191.1| P-loop NTPase and Toll/interleukin-1 receptor (TIR) homology domain
           protein [Arabidopsis thaliana]
          Length = 834

 Score =  266 bits (681), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 192/571 (33%), Positives = 286/571 (50%), Gaps = 72/571 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V+I+GIWG+ GIGKT++A+ IF+  +  ++   F+ D     +       L++  +S
Sbjct: 234 STDVEIMGIWGIAGIGKTSIAREIFELHAPHYDFCYFLQDFHLMCQMKRP-RQLREDFIS 292

Query: 64  TTLSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
               E+  +   ++ P F ++   +  +L+VLDDV+     + +IG    F  G RI++T
Sbjct: 293 KLFGEEKGLGASDVKPSFMRDWFHKKTILLVLDDVSNARDAEAVIGGFGWFSHGHRIILT 352

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           +R K+VL   + + KK Y +  L   E+F     +   EN    +L       +S + G 
Sbjct: 353 SRSKQVL--VQCKVKKPYEIQKLSDFESFRLCKQYLDGENPVISEL-------ISCSSGI 403

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L++L SS+  +  ++    L  L +   ++I + +   + SF+ L    K+IFLD+A
Sbjct: 404 PLALKLLVSSVSKQYITNMKDHLQSLRKDPPTQIQEAF---RRSFDGLDENEKNIFLDLA 460

Query: 243 CFFEGEDKDFVASILDDSES-DVLDI--LIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
           CFF G+ KD+   +LD       + I  LID+SL+S+  N + M    Q+MGR IV +E 
Sbjct: 461 CFFRGQSKDYAVLLLDACGFFTYMGICELIDESLISLVDNKIEMPIPFQDMGRIIVHEED 520

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
           E +P +RSRLWD K+I  VL +N GT+AIEGIFLD S +    L P  F  M NLRL KF
Sbjct: 521 E-DPCERSRLWDSKDIVDVLTNNSGTEAIEGIFLDASDLT-CELSPTVFGKMYNLRLLKF 578

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
           Y           S S  +     K+ LP+GLD LP +L  LHW+ YPL  LP  F P NL
Sbjct: 579 YC----------STSGNQ----CKLTLPHGLDTLPDELSLLHWENYPLVYLPQKFNPVNL 624

Query: 420 VELNLRCSKVEQPWEGEK----------------------------------AC-----V 440
           VELN+  S +E+ WEG+K                                   C     V
Sbjct: 625 VELNMPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCTSLIDV 684

Query: 441 PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLG 500
             SI     L +L+ K C  LRS PS +       +N S C    +    +  +  +YL 
Sbjct: 685 SMSIPCCGKLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFEDIQDFAPNLEEIYLA 744

Query: 501 QSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
            ++I E+P SI  LT+L  LDL  C+RL+ +
Sbjct: 745 GTSIRELPLSIRNLTELVTLDLENCERLQEM 775



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 40/184 (21%)

Query: 482 VNLIEFPQISGKVTRLYLGQSAIEEVP----SSIECLTD---------LEVLDLRGCKRL 528
           VNL+E       + +L+ G+  +E++     S    LTD         LE +DL GC  L
Sbjct: 622 VNLVELNMPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCTSL 681

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
             +S S      LV+L +  C  L   P +++                        L  L
Sbjct: 682 IDVSMSIPCCGKLVSLNMKDCSRLRSLPSMVD------------------------LTTL 717

Query: 589 EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
           ++L +  CS+ +++ D   +LE +Y    A ++I +LP S+     L +LD  +C+ L+ 
Sbjct: 718 KLLNLSGCSEFEDIQDFAPNLEEIYL---AGTSIRELPLSIRNLTELVTLDLENCERLQE 774

Query: 649 FPRT 652
            PRT
Sbjct: 775 MPRT 778



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 43/204 (21%)

Query: 637 SLDSSHCK-----GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN 691
           S   + CK     GL++ P         + LLH  +Y +  +PQ+   ++ +E L +  +
Sbjct: 581 STSGNQCKLTLPHGLDTLP-------DELSLLHWENYPLVYLPQKFNPVNLVE-LNMPYS 632

Query: 692 NFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL--PLCLKYLHLIDCKMLQSLPV-LPFC- 747
           N E L    K + +L+ I L     L  +  L   L L+++ L  C  L  + + +P C 
Sbjct: 633 NMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCTSLIDVSMSIPCCG 692

Query: 748 -LESLDLTGCNMLRSLPELP--LCLQYLNLEDCNMLR-----------------SLPELP 787
            L SL++  C+ LRSLP +     L+ LNL  C+                    S+ ELP
Sbjct: 693 KLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFEDIQDFAPNLEEIYLAGTSIRELP 752

Query: 788 LCLQLLT------VRNCNRLQSLP 805
           L ++ LT      + NC RLQ +P
Sbjct: 753 LSIRNLTELVTLDLENCERLQEMP 776



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 4/106 (3%)

Query: 616 LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
           L   +++  +  S+     L SL+   C  L S P   ++ L+ + LL++S  +  E  Q
Sbjct: 675 LEGCTSLIDVSMSIPCCGKLVSLNMKDCSRLRSLPS--MVDLTTLKLLNLSGCSEFEDIQ 732

Query: 676 EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP 721
           + A   +LE +YL+G +   LP  I+ +++L  + LE+   LQ +P
Sbjct: 733 DFA--PNLEEIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMP 776


>gi|357499211|ref|XP_003619894.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494909|gb|AES76112.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1064

 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 203/617 (32%), Positives = 310/617 (50%), Gaps = 59/617 (9%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           M S D V++VG++G GG+GK+TLAKA+++  + +FEG CF+ +VR NS +   L+HLQ+ 
Sbjct: 202 MGSEDEVRMVGLFGTGGMGKSTLAKAVYNFVADQFEGVCFLHNVRENS-SHNNLKHLQED 260

Query: 61  ML--STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +L  +  L+ KL      I    KER+ R K+L++LDDV+++ QL+ L G LD FG GSR
Sbjct: 261 LLLRTVKLNHKLGDVSEGIS-IIKERLSRKKILLILDDVDKLEQLEALAGGLDWFGHGSR 319

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRDK +L          + V  L   EA E     AFK +  P         VV+Y
Sbjct: 320 VIITTRDKHLLACHGI--TSTHAVEELNETEALELLRRMAFKNDKVPSSYEEILNRVVTY 377

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL +  +G +L  ++   W + L +   I +    DI  IL++S++ L  + +S+F
Sbjct: 378 ASGLPLAIVTIGGNLFGRKVEDWERTLDEYENIPDK---DIQRILQVSYDALKEKDQSVF 434

Query: 239 LDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSI--SGNFLNMHDILQEMGR 292
           LDIAC F+G +   V  IL       ++    +L +KSL+       ++ +HD++++MG+
Sbjct: 435 LDIACCFKGCEWTKVKKILHAHYGHCIEHHVGVLAEKSLIGHWEYDTYVTLHDLIEDMGK 494

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL-SKIKGINLDPRAFTNM 351
           +IVRQES  +PG+RSRLW P +I  VL+ N GT  IE I+L+  S  +    D  A   M
Sbjct: 495 EIVRQESPNKPGERSRLWFPDDIVNVLRDNTGTGNIEMIYLEFDSTARETEWDGMACKKM 554

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL- 410
           +NL+        F                        G  YLP  LRY  W   PL++L 
Sbjct: 555 TNLKTLIIEYANF----------------------SRGPGYLPSSLRYWKWIFCPLKSLS 592

Query: 411 ---PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSN 467
                 F    ++ LN        P           +     L   SF+ C+SL    S+
Sbjct: 593 CISSKEFNYMKVLTLNYSRYLTHIP----------DVSGLPNLEKCSFQNCESLIRIHSS 642

Query: 468 LHFVCPVTI-NFSYCVNLIEFPQ---ISGKVTRLYLGQSAIE-EVPSSIECLTDLEVLDL 522
           +  +  + I N S C  L  FP    +S K  ++   +S  +  + +SI  L  LE+L+ 
Sbjct: 643 IGHLNKLEILNASGCSKLEHFPPLQLLSLKKFKISHCESLKKITIHNSIGHLNKLEILNT 702

Query: 523 RGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
             C +L+       +L SL    + GC +L++FPE+L KM ++K I    T I EL  SF
Sbjct: 703 SNCLKLEHFPP--LQLPSLKKFEISGCESLKNFPELLCKMTNIKDIEIYDTSIEELRYSF 760

Query: 583 ENLPGLEVLFVEDCSKL 599
           +N   L+ L +    KL
Sbjct: 761 QNFSELQRLTISGGGKL 777


>gi|105922831|gb|ABF81439.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1178

 Score =  266 bits (680), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 200/572 (34%), Positives = 297/572 (51%), Gaps = 67/572 (11%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGP-NIP 78
           KTT+A+ ++D+   +FEGSCF+++VR       G   LQ+Q+LS  L E+  V       
Sbjct: 364 KTTVARVLYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEILMERASVWDSFRGI 423

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+R   VL     ++ K
Sbjct: 424 LMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPGSRIIITSRHSNVLTGI--DDTK 481

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY    L  ++A   F   AFK +   ED    S+ VV Y  G PL LEV+GS L  +  
Sbjct: 482 IYEAEKLNDDDALMLFSQKAFKNDQPAEDFVGLSKQVVDYANGLPLALEVIGSFLYGRSI 541

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             W   ++ +N I + +I    D+L+ISF+ L    + IFLDIACF +G  KD +  ILD
Sbjct: 542 PEWRGAINRMNEIPDGKI---IDVLRISFDGLHESDQKIFLDIACFLKGFKKDRITRILD 598

Query: 259 D---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
               + S  + +LI++SL+S+  + + MH++LQ MG++IVR ES +EPG+RSRLW  +++
Sbjct: 599 RCGFNASIGIPVLIERSLISVYRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDV 658

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
              L  N G + IE IFLD+  IK    + +AF+ MS LRL K                 
Sbjct: 659 CLALMDNTGKEKIEAIFLDMPGIKEAQWNMKAFSKMSKLRLLKI---------------- 702

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
                   +Q+  G + L  KLR+L W + P ++LP++ +   LVEL++  S +EQ W G
Sbjct: 703 ------DNMQVSEGPEDLSNKLRFLEWHSCPSKSLPADLQVDELVELHMANSSLEQLWYG 756

Query: 436 EKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG--K 493
            K+ V   I                               IN S  +NLI+ P  +G   
Sbjct: 757 CKSAVNLKI-------------------------------INLSNSLNLIKTPDFTGILN 785

Query: 494 VTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
           +  L L G +++ EV  S+     L+ ++L  CKR+ RI  +  ++ SL   IL GC  L
Sbjct: 786 LENLILEGCTSLFEVHPSLAHHKKLQYVNLVNCKRI-RILPNNLEMESLKVCILDGCSKL 844

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
           E FP+I   M  L  +Y D T   E+P  F +
Sbjct: 845 EKFPDIGGNMNCLMELYLDGTG-NEIPGWFNH 875



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 27/94 (28%)

Query: 899 GSEIPDWFSNQSSGSSICIQLPPHS----SCRNLIGFA--------------------FC 934
           G+EIP WF++QS GSSI +Q+P  S    +C     +                      C
Sbjct: 866 GNEIPGWFNHQSKGSSISVQVPNWSMGFVACVAFSAYGERPLLRCDFKANGRENYPSLMC 925

Query: 935 AVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKH 968
             L+S ++ SD    FY+SF +   +K + E KH
Sbjct: 926 ISLNSIQLLSDHLWLFYLSFDY---LKEVKEWKH 956


>gi|297791255|ref|XP_002863512.1| hypothetical protein ARALYDRAFT_356517 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309347|gb|EFH39771.1| hypothetical protein ARALYDRAFT_356517 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 991

 Score =  266 bits (679), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 212/670 (31%), Positives = 327/670 (48%), Gaps = 82/670 (12%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLE-HLQKQM 61
           + +  +IV + GMGGIGKT LAK + ++   +     F+  VR  S+  G  +  LQK +
Sbjct: 72  NDNETRIVAVVGMGGIGKTFLAKKLLEKLKRKIGSHVFIESVRETSKAHGFDKLKLQKTL 131

Query: 62  LSTTL-SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           +   L +E +     N     K+ + + K+ +VLDDV+   Q+  L+G  D   +GSRI+
Sbjct: 132 VDGLLPNEDIICDNENPLEVWKDHLLKKKVAVVLDDVHGKEQVNALLGNCDWIKKGSRII 191

Query: 121 VTTRDKRVLEKFRGEE--KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +TTRDK +L   +G E    IY V G    ++ E F  +AF +  C       SR  V Y
Sbjct: 192 ITTRDKSLL---KGVEMVSDIYEVPGFNDSDSLELFSTYAFDDKSCK--FMELSRKFVDY 246

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
           T GNPL L+ LG  L  K K HW   L  L +    +I      L +S+++L    K +F
Sbjct: 247 TGGNPLALKALGEELLGKDKGHWEARLVTLTQRSNEKIRKE---LILSYDELNEHQKDVF 303

Query: 239 LDIACFFEGEDKDFVASILD---DSES----DVLDILIDKSLVSISGNFLNMHDILQEMG 291
           LDIACFF  +D++++ ++L    D+ES      +  L DK L+ IS + + M+D++  +G
Sbjct: 304 LDIACFFRSQDENYIKTLLHCSFDAESGEAGKEVRELSDKFLIRISEDRVEMNDLIYTLG 363

Query: 292 RQIVRQESEKEPGKRSRL-WDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
           R++     E   GK   L  + +E    LK+ +  D I GIFLD+SK++ I LD +AF  
Sbjct: 364 RELAISCVETIAGKYRLLPSNREEFINALKNKEERDKIRGIFLDMSKMEEIPLDYKAFVG 423

Query: 351 MSNLRLFKFY---VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           MSNLR  K Y    P+  E +             SK+ LP+GL++    +RY HW  +P+
Sbjct: 424 MSNLRYLKVYNSHCPRQCEAD-------------SKLNLPDGLEFPICNVRYFHWLKFPV 470

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEGEKA----------------------------- 438
             LP +  PKNL++L L  S++ Q W  +KA                             
Sbjct: 471 EELPCDLDPKNLIDLKLHYSQIRQVWTSDKATPRLKWVDLSHSSKLSSLLGLSKAPNLLR 530

Query: 439 -----CVP------SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEF 487
                C          +QN K L  L+ +GC  L S P  +       +  S C    +F
Sbjct: 531 LNLEGCTSLEELSGEILQNMKNLILLNLRGCTGLVSLPK-ISLCSLKILILSGCSKFQKF 589

Query: 488 PQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS--TSFCKLRSLVTLI 545
             IS  +  LYL  +AI+ +P S+  L  L +LDL+ CK L+ +S  T+   +RSL  L 
Sbjct: 590 QVISENLETLYLNGTAIDRLPPSVGNLQRLILLDLKDCKNLETLSDCTNLGNMRSLQELK 649

Query: 546 LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDN 605
           L GC  L+ FP   + +E+L+ +  + T IT++P +   +  L  L +    ++  L  N
Sbjct: 650 LSGCSKLKSFP---KNIENLRNLLLEGTAITKMPQNINGMSLLRRLCLSRSDEIYTLQFN 706

Query: 606 IGSLEYLYYI 615
              L +L ++
Sbjct: 707 TNELYHLKWL 716



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 114/493 (23%), Positives = 184/493 (37%), Gaps = 120/493 (24%)

Query: 616  LAAASAISQLPSSVALSNM--LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
            L   +++ +L   + L NM  L  L+   C GL S P+  L  L  + L   S +   ++
Sbjct: 533  LEGCTSLEELSGEI-LQNMKNLILLNLRGCTGLVSLPKISLCSLKILILSGCSKFQKFQV 591

Query: 674  PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP-----LCLK 728
              E     +LE LYL+G   + LP  +  + +L  + L+D   L++L +         L+
Sbjct: 592  ISE-----NLETLYLNGTAIDRLPPSVGNLQRLILLDLKDCKNLETLSDCTNLGNMRSLQ 646

Query: 729  YLHLIDCKMLQSLP-----VLPFCLESLDLT-------GCNMLRSL-------------- 762
             L L  C  L+S P     +    LE   +T       G ++LR L              
Sbjct: 647  ELKLSGCSKLKSFPKNIENLRNLLLEGTAITKMPQNINGMSLLRRLCLSRSDEIYTLQFN 706

Query: 763  -PELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEK 821
              EL   L++L L  C  L SL  LP  LQ L    C  L+++   L  L          
Sbjct: 707  TNEL-YHLKWLELMYCKNLTSLLGLPPNLQFLYAHGCTSLKTVSSPLALL---------- 755

Query: 822  LSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEM 881
                      + E + S    F FTNC +L   + N I++ S+   RH         Y+ 
Sbjct: 756  ---------ISTEQIHST---FIFTNCHELEQVSKNDIMS-SIQNTRHPT------SYDQ 796

Query: 882  AINEKLSELRGSLIVLPGSEIP-DWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSK 940
                               E+P  W+  + +G ++C+                 AV  + 
Sbjct: 797  Y----------------NRELPRHWYEGRVNGLALCV-----------------AVSFNN 823

Query: 941  KVDSDCFRYFYVSFQF-DLEIKTLSETKHVDLGYNSRYIEDL--IDSDRVILGFKPCLNV 997
              D +       +F+F D    +LS+      G+     ++L  IDSD V +G+     +
Sbjct: 824  YKDQNNGLQVKCTFEFTDHANVSLSQISFFVGGWTKIPEDELSKIDSDHVFIGYNNWFYI 883

Query: 998  GFPDGYHH-----TIATFKF-----FAERKFYKIKRCGLCPVYANPSETK---DNTFTIN 1044
               +  H      T  + +F      ++ K  K+ +CG   +Y +    K   D TF  N
Sbjct: 884  KCEEDRHKNGCVPTNVSLRFEVTDGASKVKECKVMKCGFSLIYESEGSEKVSRDATFDAN 943

Query: 1045 FATEVWKLDDLPS 1057
               E  KL +  S
Sbjct: 944  SKIEESKLSETKS 956


>gi|357513247|ref|XP_003626912.1| Resistance protein [Medicago truncatula]
 gi|355520934|gb|AET01388.1| Resistance protein [Medicago truncatula]
          Length = 1925

 Score =  266 bits (679), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 194/598 (32%), Positives = 298/598 (49%), Gaps = 81/598 (13%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG-GLEHLQKQML 62
           S  V ++GIWGMGG GKTT A+ I+++   +F    F+ ++R   E    G+ HLQ+Q+L
Sbjct: 211 SSKVCMIGIWGMGGSGKTTTARDIYNKIHRKFVDHSFIENIREVYEKENRGITHLQEQLL 270

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
           S            N+    ++R  R K LIVLDDV+ + Q++ L      FG GS ++VT
Sbjct: 271 S------------NVLKTIEKRFMRKKTLIVLDDVSTLEQVEALCINCKCFGAGSVLIVT 318

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           +RD R+L+  + +  +IY +  ++  ++ E FC  AF+E     D +  SR +V Y +G 
Sbjct: 319 SRDVRILKLLKVD--RIYNIKEMDENKSLELFCWHAFREPSPKGDFSELSRRIVVYCRGL 376

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFLDI 241
           PL LEV+GS L  +    W  VL  L RI + ++H+    L+IS++ L     K IFLDI
Sbjct: 377 PLALEVIGSYLRDRTIQEWISVLSKLERIPDDKVHEK---LRISYDGLKNDTEKDIFLDI 433

Query: 242 ACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQ 297
            CFF G+D+ +V+ I+D  D  + + + +LI++SL+ I   N L MH +L++MGR+IVR+
Sbjct: 434 CCFFIGKDRAYVSEIIDGCDFYAGIGITVLIERSLLKIEKSNKLGMHSLLRDMGREIVRK 493

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDA------IEGIFLDLSKIKGINLDPRAFTNM 351
            S KEPGKRSRLW  K+  +VL       A      +EG+ L       + ++   F  M
Sbjct: 494 RSIKEPGKRSRLWFHKDAHKVLTEKTPRSAMVDIKTVEGLVLMSQNTNDVCIETNTFKEM 553

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NLRL K +                       V L     +L K+LR+LHW  +    +P
Sbjct: 554 KNLRLLKLH----------------------HVDLTGAFGFLSKELRWLHWQGFTHEYIP 591

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
            +F   NLV   L+ S ++Q W   K          K L  L+    + L S P      
Sbjct: 592 DDFFLGNLVVFELKHSNIKQVWNETKL--------MKNLKILNLSHSKYLTSTP------ 637

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQS-AIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                +FS   NL           +L +    ++ EV  SI  L +L +++L+ C  L  
Sbjct: 638 -----DFSKLPNL----------EKLIMKDCPSLSEVHQSIGGLRNLLLINLKDCTSLSN 682

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
           +     +L+SL TLI+ GC  ++   E + +ME L  +    T + E+P S   L  +
Sbjct: 683 LPKKINQLKSLTTLIISGCSKIDKLEEGIVQMESLTTLVIKDTGVKEVPYSVVRLKSI 740



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 196/684 (28%), Positives = 314/684 (45%), Gaps = 127/684 (18%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSET-AGGLEHLQKQMLSTT 65
            V ++GIWGMGG+GKTT AKA+++Q   +FE   F+ ++R   E  + G+ HLQ+Q+LS  
Sbjct: 1306 VCMMGIWGMGGLGKTTTAKAVYNQIHRKFEDKSFIENIREVYEKYSTGIIHLQQQLLSDI 1365

Query: 66   LSEKLEVAGPNIPHFTKER-VRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            L+ K  +        T ER ++  + L+VLDDV  +  +               ++VTTR
Sbjct: 1366 LNSKEIIHSIASGTSTIERRLQGKRALVVLDDVTTIKHV---------------LIVTTR 1410

Query: 125  DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
            D R+L+    E  +++ +  +   E+ E F   AF+     +D +  SR+VV Y +    
Sbjct: 1411 DVRILKLL--EVDRVFTMKEMNERESLELFSWHAFRRPIPIKDFSELSRNVVLYER---- 1464

Query: 185  VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFLDIAC 243
                         K  W  +L  L RI   ++ +    L+IS++ L   + K IFLDI C
Sbjct: 1465 ------------TKEEWESILSKLERIPNDQVQEK---LRISYDGLKDGMEKDIFLDICC 1509

Query: 244  FFEGEDKDFVASILDDSESDV---LDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQES 299
            FF G+D+ +V  IL+         + ILI++SLV +   N + MHD++++MGR+IV + S
Sbjct: 1510 FFIGKDRAYVTEILNGCGLHAVIGIAILIERSLVKMEKNNKIGMHDLIRDMGREIVCESS 1569

Query: 300  EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
             KEPGK SRLW  ++   +L  N GT+ +EG+ L   +   +     +F  M NLRL   
Sbjct: 1570 TKEPGKLSRLWFHQDAHDILTKNSGTETVEGLILRFERTSRVCFSADSFKEMKNLRL--- 1626

Query: 360  YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
                               L    V L     YL K+LR++HW     R +P +    NL
Sbjct: 1627 -------------------LQLDNVDLTGDYGYLSKELRWVHWQKSAFRYIPDDLYLGNL 1667

Query: 420  VELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
            V ++L+ S ++Q W              KYL                        T +FS
Sbjct: 1668 VVIDLKHSNIKQVW-----------NETKYLKT----------------------TPDFS 1694

Query: 480  YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
               NL +          +      + +V  SI  L  L +++L+ C+ L+ +  +  +L+
Sbjct: 1695 KSPNLEKL---------IMKNCPCLSKVHQSIGDLNRLHMINLKDCRSLQNLPKNIYQLK 1745

Query: 540  SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS--------FENLPGLE-- 589
            SL TLIL GC  ++   E + +ME L  + +  T + E+P S        + +L G E  
Sbjct: 1746 SLKTLILSGCSKIDKLEEDIVQMESLTTLIAKDTGVKEVPYSIVRSKSIGYISLCGYEDF 1805

Query: 590  -VLFVEDC----SKLDNLPDNIGSLEYLYYILAAASAIS-QLPSSVALSNMLRSLDSSHC 643
             V+F        S ++   +N+G L  +   L+   A+  Q  S + L+  LR +    C
Sbjct: 1806 HVMFFPLSFGLGSSINVQNNNLGFLSTMVRSLSQLRAVWLQCRSKIQLTRELRRILDDQC 1865

Query: 644  ----KGLESFPRTFLLGLSAMGLL 663
                  LES   + +  LS+  LL
Sbjct: 1866 DVNFTELESSHASQVSNLSSRSLL 1889



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 114/253 (45%), Gaps = 24/253 (9%)

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
           G +    L  S I++V +  + + +L++L+L   K L   +  F KL +L  LI+  C +
Sbjct: 597 GNLVVFELKHSNIKQVWNETKLMKNLKILNLSHSKYLTS-TPDFSKLPNLEKLIMKDCPS 655

Query: 552 LEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
           L    + +  + +L  I   D T ++ LP     L  L  L +  CSK+D L + I  +E
Sbjct: 656 LSEVHQSIGGLRNLLLINLKDCTSLSNLPKKINQLKSLTTLIISGCSKIDKLEEGIVQME 715

Query: 611 YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV 670
            L  ++   + + ++P SV     L+S+                  +S  G   +S+   
Sbjct: 716 SLTTLVIKDTGVKEVPYSVV---RLKSIGY----------------ISLCGYEGLSEDVF 756

Query: 671 REIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
             I Q  +++S   +  L  NN + L  I+K ++QLR + ++  +  Q   EL +     
Sbjct: 757 HSIIQ--SWMSP-TMNNLPHNNLDFLKPIVKSLAQLRTVWIQCHSKNQLTQELKIIFDDQ 813

Query: 731 HLIDCKMLQSLPV 743
           + I+C   ++L +
Sbjct: 814 YYINCTESEALQI 826



 Score = 46.6 bits (109), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 26/187 (13%)

Query: 561  KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAA 619
            K  ++K+++++   +   P  F   P LE L +++C  L  +  +IG L  L+ I L   
Sbjct: 1673 KHSNIKQVWNETKYLKTTPD-FSKSPNLEKLIMKNCPCLSKVHQSIGDLNRLHMINLKDC 1731

Query: 620  SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
             ++  LP ++     L++L  S C  ++      ++ + ++  L   D  V+E+P  I  
Sbjct: 1732 RSLQNLPKNIYQLKSLKTLILSGCSKIDKLEED-IVQMESLTTLIAKDTGVKEVPYSIVR 1790

Query: 680  LSSLEILYLSG-----------------------NNFESLPAIIKQMSQLRFIHLEDFNM 716
              S+  + L G                       NN   L  +++ +SQLR + L+  + 
Sbjct: 1791 SKSIGYISLCGYEDFHVMFFPLSFGLGSSINVQNNNLGFLSTMVRSLSQLRAVWLQCRSK 1850

Query: 717  LQSLPEL 723
            +Q   EL
Sbjct: 1851 IQLTREL 1857


>gi|297848110|ref|XP_002891936.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337778|gb|EFH68195.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1064

 Score =  265 bits (678), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 209/651 (32%), Positives = 325/651 (49%), Gaps = 81/651 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++  D   IVGI G  GIGKTT+A+A+    S  F+ SCF+ ++RG+  +      L+  
Sbjct: 203 LNHDDGAMIVGICGPAGIGKTTIARALHSLLSSSFQLSCFMENLRGSYNSGLDEYGLKLC 262

Query: 61  MLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +    LS+ L   G  + H     ER+   K+LI+LDDVN++ QL+ L  E   FG GSR
Sbjct: 263 LQQQLLSKILNQNGMRVYHLGAIHERLCDRKVLIILDDVNDLKQLEALADETRWFGPGSR 322

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I+VTT D+ +L++        Y+V     E + +  C +AF+++         +  +   
Sbjct: 323 IIVTTEDQELLQQH--GINNTYQVGFPSKEISLKILCRYAFRQSFPHHGFKELALRLTKL 380

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
               PL L V+GSSL  K++  W +V+  L  I +    DI ++L++ +  L    KS+F
Sbjct: 381 CGNLPLGLRVVGSSLRGKKEEEWEEVMCRLETILDHR--DIEEVLRVGYESLHENEKSLF 438

Query: 239 LDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF-LNMHDILQEMGRQI 294
           L IA FF  +D D V ++L ++  D+   L IL++KSL+ IS    + MH +LQ++GRQ+
Sbjct: 439 LHIAVFFNHKDGDIVNAMLAETNLDIKHGLRILVNKSLIYISTKREIVMHKLLQQVGRQV 498

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           + ++   EP KR  L D  EI  VL+++ G  A+ GI  D S I  + +  RA   MSNL
Sbjct: 499 IHRQ---EPWKRQILIDAHEICDVLENDTGNRAVSGISFDTSGIAEVIISDRALRRMSNL 555

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           R    Y  ++                  +V +P  +++ P +LR LHW+ YP ++LP  F
Sbjct: 556 RFLSVYKTRYN--------------GNDRVHIPEEIEF-PPRLRLLHWEAYPKKSLPLRF 600

Query: 415 KPKNLVELNLRCSKVEQPWEG-------EKACVPSS--------IQNFKYLSALSFKGCQ 459
             +NLVEL +R S++E+ WEG       +K    SS        + N   L  L   GC 
Sbjct: 601 CLENLVELYMRDSQLEKLWEGAQPLTNLKKMDFSSSRKLKELPDLSNATNLKRLQLNGCT 660

Query: 460 SLRSFPS---NLHF-------------VCPVTINFSY--------CVNLIEFPQISGKVT 495
           SL   PS   NLH              V P  IN +         C  L  FP +S  ++
Sbjct: 661 SLVEIPSTIANLHKLEDLVMNSCVNLEVVPTHINLASLERIYMIGCSRLRTFPDMSTNIS 720

Query: 496 RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
           +L + ++A+E+VP+SI   + L  +D+RG   LK ++     L SL     L   ++E  
Sbjct: 721 QLLMSETAVEKVPASIRLWSRLSYVDIRGSGNLKTLTHFPESLWSLD----LSYTDIEKI 776

Query: 556 PEILEKMEHLKRIY----SDRTPITELPSSFENLPGLEVLFVEDCSKLDNL 602
           P  ++++ HL+ +          + ELPSS      L +L  EDC  L+N+
Sbjct: 777 PYCIKRIHHLQSLEVTGCRKLASLPELPSS------LRLLMAEDCKSLENV 821



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 141/362 (38%), Gaps = 89/362 (24%)

Query: 562 MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASA 621
           +E+L  +Y   + + +L    + L  L+ +      KL  LPD   +       L   ++
Sbjct: 602 LENLVELYMRDSQLEKLWEGAQPLTNLKKMDFSSSRKLKELPDLSNATNLKRLQLNGCTS 661

Query: 622 ISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLS 681
           + ++PS++A  + L  L  + C  LE  P    L  S   +  I    +R  P     +S
Sbjct: 662 LVEIPSTIANLHKLEDLVMNSCVNLEVVPTHINLA-SLERIYMIGCSRLRTFPDMSTNIS 720

Query: 682 SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
            L    +S    E +PA I+  S+L ++ +     L++L   P  L  L L        +
Sbjct: 721 QL---LMSETAVEKVPASIRLWSRLSYVDIRGSGNLKTLTHFPESLWSLDL----SYTDI 773

Query: 742 PVLPFC------LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTV 795
             +P+C      L+SL++TGC  L SLPELP  L+ L  EDC  L ++            
Sbjct: 774 EKIPYCIKRIHHLQSLEVTGCRKLASLPELPSSLRLLMAEDCKSLENVT----------- 822

Query: 796 RNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKA 855
                                         SP        L++      FTNC KL G++
Sbjct: 823 ------------------------------SP--------LRTPNAKLNFTNCFKLGGES 844

Query: 856 NNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSI 915
                       R + I SL L YE              + LPG E+P  F++Q+ G+S+
Sbjct: 845 ------------RRVIIQSLFL-YE-------------FVCLPGREMPPEFNHQARGNSL 878

Query: 916 CI 917
            I
Sbjct: 879 TI 880


>gi|82542045|gb|ABB82030.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 698

 Score =  265 bits (678), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 186/512 (36%), Positives = 273/512 (53%), Gaps = 54/512 (10%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           ++D V+IVGI GM GIGKTT+AK +F+Q  + FEGSCF+S++   S+   GL  LQKQ+L
Sbjct: 190 ATDDVRIVGIHGMPGIGKTTIAKVVFNQLCYGFEGSCFLSNINETSKQFNGLAPLQKQLL 249

Query: 63  STTLSEKLEVAGPNIPH----FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
              L  K + A  N         KER+RR ++L+V DDV  + QL  L+GE   FG GSR
Sbjct: 250 HDIL--KQDAANINCDDRGKVLIKERLRRKRVLVVADDVAHLDQLNALMGERSWFGPGSR 307

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRD  +L     E  + YR+  L  +E+   F   AFK+    ED    S+  V Y
Sbjct: 308 VIITTRDSNLLR----EADQTYRIKELTRDESLRLFSWHAFKDTKPAEDYIELSKDAVDY 363

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSI 237
             G PL LEV+G+ L  K +  W  V+  L RI     HDI   L+ISF+ L    +++ 
Sbjct: 364 CGGLPLALEVMGACLSGKNRDGWKCVIDKLRRIPN---HDIQGKLRISFDALDGEELQNA 420

Query: 238 FLDIACFFEGEDKDFVASILD-----DSESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
           FLDIACFF    K++VA +L      + E D L+ L ++SL+ + G  + MHD+L++MGR
Sbjct: 421 FLDIACFFIDRKKEYVAKVLGARCGYNPEVD-LETLRERSLIKVLGGTVTMHDLLRDMGR 479

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           ++VR+ S KEPGKR+R+W+ ++   VL H KGTD +EG+ LD+   +  +L   +F  M 
Sbjct: 480 EVVRESSPKEPGKRTRIWNQEDAWNVLDHQKGTDVVEGLALDVRASEAKSLSAGSFAKM- 538

Query: 353 NLRLFKFYVP-KFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
                KF +  ++  ++KL          +   ++ N L   PK LR        L+   
Sbjct: 539 -----KFVLDMQYSNLKKL----------WKGKKMRNTLQ-TPKFLR--------LKIFN 574

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKAC-----VPSSIQNFKYLSALSFKGCQSLRSFPS 466
            N     +   NL  S +E+P    K C     V  SI N K L  L+ +GC  L+  P 
Sbjct: 575 LNHSQHLIKTPNLHSSSLEKP--KLKGCSSLVEVHQSIGNLKSLVILNLEGCWRLKILPK 632

Query: 467 NLHFVCPVT-INFSYCVNLIEFPQISGKVTRL 497
           ++  V  +  +N S C  L +  +  G +  L
Sbjct: 633 SIGNVKSLKHLNISGCSQLEKLSERMGDMESL 664



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 78/185 (42%), Gaps = 30/185 (16%)

Query: 422 LNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC 481
           L+++ S +++ W+G+K         F  L   +    Q L   P NLH            
Sbjct: 542 LDMQYSNLKKLWKGKKMRNTLQTPKFLRLKIFNLNHSQHLIKTP-NLH------------ 588

Query: 482 VNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSL 541
            + +E P++ G         S++ EV  SI  L  L +L+L GC RLK +  S   ++SL
Sbjct: 589 SSSLEKPKLKG--------CSSLVEVHQSIGNLKSLVILNLEGCWRLKILPKSIGNVKSL 640

Query: 542 VTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDN 601
             L + GC  LE   E +  ME L  + +D     +  SS   L          C +L+ 
Sbjct: 641 KHLNISGCSQLEKLSERMGDMESLTELLADGIETEQFLSSIGQLK---------CFELET 691

Query: 602 LPDNI 606
           L  NI
Sbjct: 692 LAANI 696



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 23/116 (19%)

Query: 515 TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTP 574
           + LE   L+GC  L  +  S   L+SLV L L GC  L+                     
Sbjct: 590 SSLEKPKLKGCSSLVEVHQSIGNLKSLVILNLEGCWRLKI-------------------- 629

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA 630
              LP S  N+  L+ L +  CS+L+ L + +G +E L  +LA      Q  SS+ 
Sbjct: 630 ---LPKSIGNVKSLKHLNISGCSQLEKLSERMGDMESLTELLADGIETEQFLSSIG 682


>gi|240256009|ref|NP_193685.6| P-loop NTPase and Toll/interleukin-1 receptor (TIR) homology domain
            protein [Arabidopsis thaliana]
 gi|332658790|gb|AEE84190.1| P-loop NTPase and Toll/interleukin-1 receptor (TIR) homology domain
            protein [Arabidopsis thaliana]
          Length = 1309

 Score =  265 bits (678), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 192/573 (33%), Positives = 287/573 (50%), Gaps = 72/573 (12%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S  V+I+GIWG+ GIGKT++A+ IF+  +  ++   F+ D     +       L++  +S
Sbjct: 757  STDVEIMGIWGIAGIGKTSIAREIFELHAPHYDFCYFLQDFHLMCQMKRP-RQLREDFIS 815

Query: 64   TTLSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
                E+  +   ++ P F ++   +  +L+VLDDV+     + +IG    F  G RI++T
Sbjct: 816  KLFGEEKGLGASDVKPSFMRDWFHKKTILLVLDDVSNARDAEAVIGGFGWFSHGHRIILT 875

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            +R K+VL   + + KK Y +  L   E+F     +   EN    +L       +S + G 
Sbjct: 876  SRSKQVL--VQCKVKKPYEIQKLSDFESFRLCKQYLDGENPVISEL-------ISCSSGI 926

Query: 183  PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
            PL L++L SS+  +  ++    L  L +   ++I + +   + SF+ L    K+IFLD+A
Sbjct: 927  PLALKLLVSSVSKQYITNMKDHLQSLRKDPPTQIQEAF---RRSFDGLDENEKNIFLDLA 983

Query: 243  CFFEGEDKDFVASILDDSES-DVLDI--LIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
            CFF G+ KD+   +LD       + I  LID+SL+S+  N + M    Q+MGR IV +E 
Sbjct: 984  CFFRGQSKDYAVLLLDACGFFTYMGICELIDESLISLVDNKIEMPIPFQDMGRIIVHEED 1043

Query: 300  EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
            E +P +RSRLWD K+I  VL +N GT+AIEGIFLD S +    L P  F  M NLRL KF
Sbjct: 1044 E-DPCERSRLWDSKDIVDVLTNNSGTEAIEGIFLDASDLT-CELSPTVFGKMYNLRLLKF 1101

Query: 360  YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
            Y           S S  +     K+ LP+GLD LP +L  LHW+ YPL  LP  F P NL
Sbjct: 1102 YC----------STSGNQ----CKLTLPHGLDTLPDELSLLHWENYPLVYLPQKFNPVNL 1147

Query: 420  VELNLRCSKVEQPWEGEK----------------------------------AC-----V 440
            VELN+  S +E+ WEG+K                                   C     V
Sbjct: 1148 VELNMPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCTSLIDV 1207

Query: 441  PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLG 500
              SI     L +L+ K C  LRS PS +       +N S C    +    +  +  +YL 
Sbjct: 1208 SMSIPCCGKLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFEDIQDFAPNLEEIYLA 1267

Query: 501  QSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
             ++I E+P SI  LT+L  LDL  C+RL+ + +
Sbjct: 1268 GTSIRELPLSIRNLTELVTLDLENCERLQEMPS 1300



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 110/204 (53%), Gaps = 8/204 (3%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+  ++VGI G  GIGKTT+AKA+F + S +F    FV+  R N +         ++ LS
Sbjct: 201 SEKARMVGISGPSGIGKTTIAKALFSKLSPQFHLRAFVTYKRTNQDDYDMKLCWIEKFLS 260

Query: 64  TTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
             L +K L+V         ++ +   K+LI+LDDV+++  LK L+G+   FG GSRIVV 
Sbjct: 261 EILGQKDLKVLDLGA---VEQSLMHKKVLIILDDVDDLELLKTLVGQTGWFGFGSRIVVI 317

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           T+D+++L+    +   IY V       A E FC  AF + + P D    S    +Y  GN
Sbjct: 318 TQDRQLLKAH--DINLIYEVAFPSAHLALEIFCQSAFGKIYPPSDFRELSVE-FAYLAGN 374

Query: 183 -PLVLEVLGSSLCLKRKSHWGKVL 205
            PL L VLG ++  K +  W ++L
Sbjct: 375 LPLDLRVLGLAMKGKHREEWIEML 398



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 43/206 (20%)

Query: 637  SLDSSHCK-----GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN 691
            S   + CK     GL++ P         + LLH  +Y +  +PQ+   ++ +E L +  +
Sbjct: 1104 STSGNQCKLTLPHGLDTLP-------DELSLLHWENYPLVYLPQKFNPVNLVE-LNMPYS 1155

Query: 692  NFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL--PLCLKYLHLIDCKMLQSLPV-LPFC- 747
            N E L    K + +L+ I L     L  +  L   L L+++ L  C  L  + + +P C 
Sbjct: 1156 NMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCTSLIDVSMSIPCCG 1215

Query: 748  -LESLDLTGCNMLRSLPELP--LCLQYLNLEDCNMLR-----------------SLPELP 787
             L SL++  C+ LRSLP +     L+ LNL  C+                    S+ ELP
Sbjct: 1216 KLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFEDIQDFAPNLEEIYLAGTSIRELP 1275

Query: 788  LCLQLLT------VRNCNRLQSLPEI 807
            L ++ LT      + NC RLQ +P +
Sbjct: 1276 LSIRNLTELVTLDLENCERLQEMPSL 1301



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 4/110 (3%)

Query: 616  LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
            L   +++  +  S+     L SL+   C  L S P   ++ L+ + LL++S  +  E  Q
Sbjct: 1198 LEGCTSLIDVSMSIPCCGKLVSLNMKDCSRLRSLPS--MVDLTTLKLLNLSGCSEFEDIQ 1255

Query: 676  EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
            + A   +LE +YL+G +   LP  I+ +++L  + LE+   LQ +P LP+
Sbjct: 1256 DFA--PNLEEIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMPSLPV 1303


>gi|110738533|dbj|BAF01192.1| resistence protein - like [Arabidopsis thaliana]
          Length = 924

 Score =  265 bits (678), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 192/573 (33%), Positives = 287/573 (50%), Gaps = 72/573 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V+I+GIWG+ GIGKT++A+ IF+  +  ++   F+ D     +       L++  +S
Sbjct: 372 STDVEIMGIWGIAGIGKTSIAREIFELHAPHYDFCYFLQDFHLMCQMKRP-RQLREDFIS 430

Query: 64  TTLSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
               E+  +   ++ P F ++   +  +L+VLDDV+     + +IG    F  G RI++T
Sbjct: 431 KLFGEEKGLGASDVKPSFMRDWFHKKTILLVLDDVSNARDAEAVIGGFGWFSHGHRIILT 490

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           +R K+VL   + + KK Y +  L   E+F     +   EN    +L       +S + G 
Sbjct: 491 SRSKQVL--VQCKVKKPYEIQKLSDFESFRLCKQYLDGENPVISEL-------ISCSSGI 541

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L++L SS+  +  ++    L  L +   ++I + +   + SF+ L    K+IFLD+A
Sbjct: 542 PLALKLLVSSVSKQYITNMKDHLQSLRKDPPTQIQEAF---RRSFDGLDENEKNIFLDLA 598

Query: 243 CFFEGEDKDFVASILDDSES-DVLDI--LIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
           CFF G+ KD+   +LD       + I  LID+SL+S+  N + M    Q+MGR IV +E 
Sbjct: 599 CFFRGQSKDYAVLLLDACGFFTYMGICELIDESLISLVDNKIEMPIPFQDMGRIIVHEED 658

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
           E +P +RSRLWD K+I  VL +N GT+AIEGIFLD S +    L P  F  M NLRL KF
Sbjct: 659 E-DPCERSRLWDSKDIVDVLTNNSGTEAIEGIFLDASDLT-CELSPTVFGKMYNLRLLKF 716

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
           Y           S S  +     K+ LP+GLD LP +L  LHW+ YPL  LP  F P NL
Sbjct: 717 YC----------STSGNQ----CKLTLPHGLDTLPDELSLLHWENYPLVYLPQKFNPVNL 762

Query: 420 VELNLRCSKVEQPWEGEK----------------------------------AC-----V 440
           VELN+  S +E+ WEG+K                                   C     V
Sbjct: 763 VELNMPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCTSLIDV 822

Query: 441 PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLG 500
             SI     L +L+ K C  LRS PS +       +N S C    +    +  +  +YL 
Sbjct: 823 SMSIPCCGKLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFEDIQDFAPNLEEIYLA 882

Query: 501 QSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
            ++I E+P SI  LT+L  LDL  C+RL+ + +
Sbjct: 883 GTSIRELPLSIRNLTELVTLDLENCERLQEMPS 915



 Score = 46.6 bits (109), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 43/206 (20%)

Query: 637 SLDSSHCK-----GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN 691
           S   + CK     GL++ P         + LLH  +Y +  +PQ+   ++ +E L +  +
Sbjct: 719 STSGNQCKLTLPHGLDTLP-------DELSLLHWENYPLVYLPQKFNPVNLVE-LNMPYS 770

Query: 692 NFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL--PLCLKYLHLIDCKMLQSLPV-LPFC- 747
           N E L    K + +L+ I L     L  +  L   L L+++ L  C  L  + + +P C 
Sbjct: 771 NMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCTSLIDVSMSIPCCG 830

Query: 748 -LESLDLTGCNMLRSLPELP--LCLQYLNLEDCNMLR-----------------SLPELP 787
            L SL++  C+ LRSLP +     L+ LNL  C+                    S+ ELP
Sbjct: 831 KLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFEDIQDFAPNLEEIYLAGTSIRELP 890

Query: 788 LCLQLLT------VRNCNRLQSLPEI 807
           L ++ LT      + NC RLQ +P +
Sbjct: 891 LSIRNLTELVTLDLENCERLQEMPSL 916



 Score = 46.6 bits (109), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 4/110 (3%)

Query: 616 LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
           L   +++  +  S+     L SL+   C  L S P   ++ L+ + LL++S  +  E  Q
Sbjct: 813 LEGCTSLIDVSMSIPCCGKLVSLNMKDCSRLRSLPS--MVDLTTLKLLNLSGCSEFEDIQ 870

Query: 676 EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
           + A   +LE +YL+G +   LP  I+ +++L  + LE+   LQ +P LP+
Sbjct: 871 DFA--PNLEEIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMPSLPV 918


>gi|297801406|ref|XP_002868587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314423|gb|EFH44846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1053

 Score =  265 bits (677), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 196/637 (30%), Positives = 323/637 (50%), Gaps = 99/637 (15%)

Query: 8   QIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLE------HLQKQM 61
           +++GIWG+ GIGKTT+A+A+F++ S  F+ +CF+ +++G+ ++   ++       LQ Q+
Sbjct: 212 KMIGIWGLAGIGKTTIARALFNRLSSSFQLNCFMDNLKGSFKSVMDVDDYYSKLSLQTQL 271

Query: 62  LSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
           LS  L+++ ++   ++    KE ++  ++LI+LDDV+++ QL+ L  EL  FG GSRI+V
Sbjct: 272 LSKILNQE-DMKTYDLGAI-KEWLQDQRVLIILDDVDDLEQLEALAKELSWFGSGSRIIV 329

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TT D ++L+    ++  IY V+    +EA E  C  AFK++  P      +  V ++   
Sbjct: 330 TTEDNKILKAHGIQD--IYHVDYPSEKEALEILCRSAFKQSSVPYGFEELANKVAAFCGK 387

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L V+GSSL  + K  W      L+RI  S    I  ILK+ +++L+ + +S+FL I
Sbjct: 388 LPLALCVVGSSLHGETKYEWEL---QLSRIKASLDGKIETILKVGYDRLSEKDQSLFLHI 444

Query: 242 ACFFEGEDKDFVASILDDSESDVLDILIDKSLVSIS--GNFLNMHDILQEMGRQIVRQES 299
           ACFF  E               V+ +L DKSLV IS  G  +  H +LQ++GRQIV +  
Sbjct: 445 ACFFNNE---------------VVLLLADKSLVHISTDGRIVMHHYLLQKLGRQIVLE-- 487

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
                 R  L +  EI  VL +  GT ++ GI  D SKI  +++   AF  M NL+  + 
Sbjct: 488 ------RQFLIEAAEIRDVLTNKTGTGSVIGISFDTSKIGKVSVSKGAFEGMCNLQFLRI 541

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT-LPSNFKPKN 418
           Y   F                   +Q+P  + YLP+ L+ LHW+ YP ++ LP  F+P+ 
Sbjct: 542 YSSLFG--------------GEGTLQIPKSMKYLPENLKLLHWEHYPRKSRLPLRFQPER 587

Query: 419 LVELNLRCSKVE---QPWEGEKAC---------------------------------VPS 442
           LVEL++  S +E   +P    K+                                  +P 
Sbjct: 588 LVELHMPHSNLEGGIKPLPNLKSIDLSFSSRLKEIPNLSNATNLETLTLVRCTSLTELPF 647

Query: 443 SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQS 502
           SI N   LS L  + C+ LR  P+N++      ++ +YC  L  FP IS  +  L +G +
Sbjct: 648 SISNLHKLSKLKMRVCEKLRVIPTNINLASLEEVDMNYCSQLSSFPDISSNIKTLGVGNT 707

Query: 503 AIEEVPSSIE-CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            IE+VP S+  C + L+ L++ G + L R++ +       +T + L   N++  P+ +  
Sbjct: 708 KIEDVPPSVAGCWSRLDCLEI-GSRSLNRLTHA----PHSITWLDLSNSNIKRIPDCVIS 762

Query: 562 MEHLKRIYSDR----TPITELPSSFENLPGLEVLFVE 594
           + HLK +  +       I  LP S ++L   E + +E
Sbjct: 763 LPHLKELIVENCQKLVTIPALPPSLKSLNANECVSLE 799



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 87/390 (22%), Positives = 143/390 (36%), Gaps = 110/390 (28%)

Query: 547 LGCLNLEHFPEI--LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
           L  L+ EH+P    L      +R+     P + L    + LP L+ + +   S+L  +P+
Sbjct: 565 LKLLHWEHYPRKSRLPLRFQPERLVELHMPHSNLEGGIKPLPNLKSIDLSFSSRLKEIPN 624

Query: 605 --NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGL 662
             N  +LE L   L   +++++LP S++  + L  L    C+ L   P            
Sbjct: 625 LSNATNLETL--TLVRCTSLTELPFSISNLHKLSKLKMRVCEKLRVIPTNI--------- 673

Query: 663 LHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE 722
                         +A L  +++ Y S                           L S P+
Sbjct: 674 -------------NLASLEEVDMNYCS--------------------------QLSSFPD 694

Query: 723 LPLCLKYLHLIDCKMLQSLPVLPFCLESLDL--TGCNMLRSLPELPLCLQYLNLEDCNML 780
           +   +K L + + K+    P +  C   LD    G   L  L   P  + +L+L + N+ 
Sbjct: 695 ISSNIKTLGVGNTKIEDVPPSVAGCWSRLDCLEIGSRSLNRLTHAPHSITWLDLSNSNIK 754

Query: 781 R------SLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSK-----HSPDL 829
           R      SLP L    + L V NC +L ++P +   L+ L+A+    L +     H+P  
Sbjct: 755 RIPDCVISLPHL----KELIVENCQKLVTIPALPPSLKSLNANECVSLERVCFYFHNP-- 808

Query: 830 QWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSE 889
                          F NCLKL+ +A   I   S+                         
Sbjct: 809 ----------TKILTFYNCLKLDEEARRGITQQSI------------------------- 833

Query: 890 LRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
                I LPG +IP  F+ +++G SI I L
Sbjct: 834 --HDYICLPGKKIPAEFTQKATGKSITIPL 861



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 44/254 (17%)

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
           ++  L++  S +E     I+ L +L+ +DL    RLK I  +     +L TL L+ C   
Sbjct: 587 RLVELHMPHSNLE---GGIKPLPNLKSIDLSFSSRLKEIP-NLSNATNLETLTLVRC--- 639

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNI--GSLE 610
                               T +TELP S  NL  L  L +  C KL  +P NI   SLE
Sbjct: 640 --------------------TSLTELPFSISNLHKLSKLKMRVCEKLRVIPTNINLASLE 679

Query: 611 YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV 670
            +       +  SQL S   +S+ +++L   + K +E  P +     S +  L I   ++
Sbjct: 680 EV-----DMNYCSQLSSFPDISSNIKTLGVGNTK-IEDVPPSVAGCWSRLDCLEIGSRSL 733

Query: 671 REI---PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCL 727
             +   P  I +L       LS +N + +P  +  +  L+ + +E+   L ++P LP  L
Sbjct: 734 NRLTHAPHSITWLD------LSNSNIKRIPDCVISLPHLKELIVENCQKLVTIPALPPSL 787

Query: 728 KYLHLIDCKMLQSL 741
           K L+  +C  L+ +
Sbjct: 788 KSLNANECVSLERV 801



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 126/273 (46%), Gaps = 29/273 (10%)

Query: 496 RLY---LGQSAIEEVPSSIECL-TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
           R+Y    G     ++P S++ L  +L++L      R  R+   F   R LV L +    N
Sbjct: 540 RIYSSLFGGEGTLQIPKSMKYLPENLKLLHWEHYPRKSRLPLRFQPER-LVELHMPHS-N 597

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
           LE   + L  ++ +   +S R  + E+P+   N   LE L +  C+ L  LP +I +L  
Sbjct: 598 LEGGIKPLPNLKSIDLSFSSR--LKEIPN-LSNATNLETLTLVRCTSLTELPFSISNLHK 654

Query: 612 LYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV 670
           L  + +     +  +P+++ L++ L  +D ++C  L SFP       S +  L + +  +
Sbjct: 655 LSKLKMRVCEKLRVIPTNINLAS-LEEVDMNYCSQLSSFPDIS----SNIKTLGVGNTKI 709

Query: 671 REIPQEIA----YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC 726
            ++P  +A     L  LEI   S N     P  I       ++ L + N ++ +P+  + 
Sbjct: 710 EDVPPSVAGCWSRLDCLEIGSRSLNRLTHAPHSIT------WLDLSNSN-IKRIPDCVIS 762

Query: 727 LKYLHLI---DCKMLQSLPVLPFCLESLDLTGC 756
           L +L  +   +C+ L ++P LP  L+SL+   C
Sbjct: 763 LPHLKELIVENCQKLVTIPALPPSLKSLNANEC 795


>gi|215261576|gb|ACJ64856.1| disease resistance protein RPP1-like protein R2 [Arabidopsis
            thaliana]
          Length = 1162

 Score =  265 bits (677), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 273/932 (29%), Positives = 442/932 (47%), Gaps = 129/932 (13%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQ 58
            D V+++GIWG  GIGKTT+A+ + +Q S  F+ S  + +++G        E +  L+ LQ
Sbjct: 287  DEVRMIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYPRLCLDERSAQLQ-LQ 345

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
             QMLS  ++ K       I H    +ER+R  K+ +VLD+V+++GQL  L  E   FG G
Sbjct: 346  NQMLSQMINHK----DIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPG 401

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SRI++TT D  VL K  G    +Y+V     +EAF+ FC  AF +    E  +  +R V+
Sbjct: 402  SRIIITTEDLGVL-KAHG-INHVYKVGYPSNDEAFQIFCMNAFGQKQPHEGFDEIAREVM 459

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            +     PL L+VLGS+L  K K  W + L    R+  S   +I  I++ S++ L    K 
Sbjct: 460  ALAGELPLGLKVLGSALRGKSKPEWERTLP---RLKTSLDGNIGSIIQFSYDALCDEDKY 516

Query: 237  IFLDIACFFEGED----KDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
            +FL IAC F  E     K+ +   LD  +   L IL  KSL+S  G  ++MH +L++ GR
Sbjct: 517  LFLYIACLFNDESTTKVKELLGKFLDARQG--LHILAQKSLISFDGERIHMHTLLEQFGR 574

Query: 293  QIVRQESEKEP-GKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLD---PRAF 348
            +  R++       K   L   ++I  VL  +           D  +  GINLD       
Sbjct: 575  ETSRKQFVYHGYTKHQLLVGERDICEVLNDDTT---------DSRRFIGINLDLYKNEEE 625

Query: 349  TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLP-NGLDYLPKKLRYLHWDTYPL 407
             N+S   L + +  +F +I  + +   E      +VQL    L Y   ++R L W  Y  
Sbjct: 626  LNISEKALERIHDFQFVKINDVFTHQPE------RVQLALEDLIYQSPRIRSLKWFPYQN 679

Query: 408  RTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY------------------ 449
              LPS F P+ LVEL++  S + + WEG K      ++N K+                  
Sbjct: 680  ICLPSTFNPEFLVELDMSDSNLRKLWEGTK-----QLRNLKWMDLSDSSYLKELPNLSTA 734

Query: 450  --LSALSFKGCQSLRSFPSNLHFVCPVTI-NFSYCVNLIEFPQI--SGKVTRLYLGQ-SA 503
              L  L  + C SL   PS++  +  + I +   C +L+E P    + K+ +L LG+ S+
Sbjct: 735  TNLEELKLRNCSSLVELPSSIEKLTSLQILDLHSCSSLVELPSFGNTTKLKKLDLGKCSS 794

Query: 504  IEEVPSSIECLTDLEVLDLRGCKRLKRIST--SFCKLRSLVTLILLGCLNLEHFPEILEK 561
            + ++P SI    +L+ L LR C R+ ++    +  KLR L    L  C +L   P  +  
Sbjct: 795  LVKLPPSINA-NNLQELSLRNCSRVVKLPAIENATKLRELK---LRNCSSLIELPLSIGT 850

Query: 562  MEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA-A 619
              +LK++  S  + + +LPSS  ++  LEV  +++CS L  LP +IG+L+ L  +L +  
Sbjct: 851  ATNLKKLNISGCSSLVKLPSSIGDMTNLEVFDLDNCSSLVTLPSSIGNLQKLSELLMSEC 910

Query: 620  SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
            S +  LP+++ L + L +LD + C  L+SFP       + +  L +   A++E+P  I  
Sbjct: 911  SKLEALPTNINLKS-LYTLDLTDCTQLKSFPEIS----THISELRLKGTAIKEVPLSITS 965

Query: 680  LSSLEI---------------------LYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
             S L +                     L L   + + +P  +K+MS+LR + L + N L 
Sbjct: 966  WSRLAVYEMSYFESLKEFPHALDIITDLLLVSEDIQEVPPWVKRMSRLRDLRLNNCNNLV 1025

Query: 719  SLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE--LPLCLQYLNLED 776
            SLP+L   L      +  ML    V P C      +G ++   L E  LP  L++   + 
Sbjct: 1026 SLPQLSDSLD-----NYAMLPGTQV-PACFNYRATSGDSLKIKLKESSLPRTLRF---KA 1076

Query: 777  CNML-RSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPES 835
            C ML ++   + + + ++     N L+ L     C       +   L++H    +   E 
Sbjct: 1077 CIMLVKAYDWISMGVGIVIRVKQNDLKVLCTPSGCY------IYPVLTEHIYTFELEVEE 1130

Query: 836  LKSAAICFEFTNCLKLNGKANNKILADSLLRI 867
            + S  + FEFT    L+ ++N KI    +L+I
Sbjct: 1131 VTSTELVFEFT----LDNESNWKIGECGILQI 1158



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 125/502 (24%), Positives = 220/502 (43%), Gaps = 85/502 (16%)

Query: 507  VPSSI--ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI--LEKM 562
            +PS+   E L +L++ D      L+++     +LR+L  + L     L+  P +     +
Sbjct: 682  LPSTFNPEFLVELDMSD----SNLRKLWEGTKQLRNLKWMDLSDSSYLKELPNLSTATNL 737

Query: 563  EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAI 622
            E LK    + + + ELPSS E L  L++L +  CS L  LP    + +     L   S++
Sbjct: 738  EELK--LRNCSSLVELPSSIEKLTSLQILDLHSCSSLVELPSFGNTTKLKKLDLGKCSSL 795

Query: 623  SQLPSSVALSNMLRSLDSSHCKGLESFPRT-FLLGLSAMGLLHISDYAVREIPQEIAYLS 681
             +LP S+  +N L+ L   +C  +   P       L  + L + S  ++ E+P  I   +
Sbjct: 796  VKLPPSINANN-LQELSLRNCSRVVKLPAIENATKLRELKLRNCS--SLIELPLSIGTAT 852

Query: 682  SLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH---LIDCKM 737
            +L+ L +SG ++   LP+ I  M+ L    L++ + L +LP     L+ L    + +C  
Sbjct: 853  NLKKLNISGCSSLVKLPSSIGDMTNLEVFDLDNCSSLVTLPSSIGNLQKLSELLMSECSK 912

Query: 738  LQSLP--VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCL---QL 792
            L++LP  +    L +LDLT C  L+S PE+   +  L L+      ++ E+PL +     
Sbjct: 913  LEALPTNINLKSLYTLDLTDCTQLKSFPEISTHISELRLKGT----AIKEVPLSITSWSR 968

Query: 793  LTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLN 852
            L V   +  +SL E    L      ++  L   S D+Q  P  +K  +   +    L+LN
Sbjct: 969  LAVYEMSYFESLKEFPHALD-----IITDLLLVSEDIQEVPPWVKRMSRLRD----LRLN 1019

Query: 853  GKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFS-NQSS 911
               N               + SL          +LS+   +  +LPG+++P  F+   +S
Sbjct: 1020 NCNN---------------LVSL---------PQLSDSLDNYAMLPGTQVPACFNYRATS 1055

Query: 912  GSSICIQLPPHSSCRNL--------------IGFAFCAVLDSKKVD-------SDCFRYF 950
            G S+ I+L   S  R L              I      V+  K+ D       S C+ Y 
Sbjct: 1056 GDSLKIKLKESSLPRTLRFKACIMLVKAYDWISMGVGIVIRVKQNDLKVLCTPSGCYIYP 1115

Query: 951  YVS---FQFDLEIKTLSETKHV 969
             ++   + F+LE++ ++ T+ V
Sbjct: 1116 VLTEHIYTFELEVEEVTSTELV 1137


>gi|2853079|emb|CAA16929.1| resistance protein RPP5-like [Arabidopsis thaliana]
 gi|7268748|emb|CAB78954.1| resistance protein RPP5-like [Arabidopsis thaliana]
          Length = 1715

 Score =  265 bits (677), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 248/914 (27%), Positives = 381/914 (41%), Gaps = 215/914 (23%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            ++ +GIWGM GIGKTTLA+A +DQ S +FE SCF+ D     +  G    L+KQ+     
Sbjct: 165  IRSLGIWGMAGIGKTTLARAAYDQLSRDFEASCFIEDFDREFQEKGFFGLLEKQLGVNPQ 224

Query: 67   SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
              +L +          + +R  ++L+VLDDV +       + E D  G GS I+VT++DK
Sbjct: 225  VTRLSI--------LLKTLRSKRILLVLDDVRKPLGATSFLCEFDWLGPGSLIIVTSQDK 276

Query: 127  RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVL 186
            +VL + +  E  IY+V GL   E+ + F   AF ++   ++L   S   V Y  GNPL L
Sbjct: 277  QVLVQCQVNE--IYKVQGLNKHESLQLFSRCAFGKDVPDQNLLELSMKFVDYANGNPLAL 334

Query: 187  EVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFE 246
             + G +L  K       V+ +L R    +   I+  LK S++ L+   K IFLDI   F 
Sbjct: 335  SICGKNLKGKTPLDMKSVVLELKRHLSDK---IFVKLKSSYDALSVSEKEIFLDIVFTFR 391

Query: 247  GEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEP 303
            G + D V   L          ++ L+DKS V++S N + +++++ ++G +I+  +S+ E 
Sbjct: 392  GANVDNVMQSLAGCGFFPRVGIEALVDKSFVTVSENRVQVNNLIYDVGLKIINDQSD-EI 450

Query: 304  GKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR--------AFTNMSNLR 355
            G   R  D      +++H +  ++ +G       +K INLD          AF +M NLR
Sbjct: 451  GMCYRFVDASNSQSLIEHKEIRESEQG----YEDVKAINLDTSNLPFKGHIAFQHMYNLR 506

Query: 356  LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
                Y             S+        + LP    +LP +LR LHW  YPL + P NF 
Sbjct: 507  YLTIY-------------SSINPTKDPDLFLPGDPQFLPPELRLLHWTCYPLHSFPQNFG 553

Query: 416  PKNLVELNLRCSKVEQPWEGEK----------ACVPS--SIQNFKY---LSALSFKGCQS 460
             + LVELN+ CSK+++ W G K          +C     ++   +Y   +  +  KGC  
Sbjct: 554  FQYLVELNMPCSKLKKLWGGTKNLEVLKRITLSCSVQLLNVDELQYSPNIEKIDLKGCLE 613

Query: 461  LRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPS----------- 509
            L+SFP          ++ S C  +  FP++   + +L+L  + I ++ S           
Sbjct: 614  LQSFPDTGQLQHLRIVDLSTCKKIKSFPKVPPSIRKLHLQGTGIRDLSSLNHSSESQRLT 673

Query: 510  ------------------------------SIECLTDLEVLDLRGC-------------K 526
                                           I     LEVLD  GC             K
Sbjct: 674  RKLENVSSSNQDHRKQVLKLKDSSHLGSLPDIVIFESLEVLDFSGCSELEDIQGFPQNLK 733

Query: 527  RL-------KRISTSFC-------------------------KLRSLVTLILLGCLNLEH 554
            RL       K + +S C                          ++ L  L L GC NLE+
Sbjct: 734  RLYLAKTAIKEVPSSLCHHISKLVKLDMENCERLRDLPMGMSNMKYLAVLKLSGCSNLEN 793

Query: 555  FPEILEKMEHLKRIYSDRTPITELPSS-FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
              E+     +LK +Y   T + E PS+  E L  + +L +E+C KL  LP  +  LE+L 
Sbjct: 794  IKEL---PRNLKELYLAGTAVKEFPSTLLETLSEVVLLDLENCKKLQGLPTGMSKLEFLV 850

Query: 614  Y---------------------ILAAASAISQLPSSVALS-------------------- 632
                                  +  A +AI +LP S+                       
Sbjct: 851  MLKLSGCSKLEIIVDLPLNLIELYLAGTAIRELPPSIGDLALLDTLDLKNCNRLRHLPME 910

Query: 633  ----NMLRSLDSSHCKGLESF-----------------------PRTFLLGLSAMGLLHI 665
                N L+ LD S+C  LE F                       P  F +       L +
Sbjct: 911  MHNLNPLKVLDLSNCSELEVFTSSLPKVRELRPAPTVMLLRSKLPFCFFIFYEHRVTLSL 970

Query: 666  SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
                ++ IP+EI ++ SL+ L LS N F  +P  IK  S+L  + L     L+SLP+LP 
Sbjct: 971  YKARLQYIPEEIRWMPSLKTLDLSRNGFTEVPVSIKDFSKLLSLRLRYCENLRSLPQLPR 1030

Query: 726  CLKYLHLIDCKMLQ 739
             L+ L+   C  LQ
Sbjct: 1031 SLQLLNAHGCSSLQ 1044


>gi|124361211|gb|ABN09183.1| TIR; AAA ATPase [Medicago truncatula]
          Length = 1474

 Score =  265 bits (677), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 193/581 (33%), Positives = 307/581 (52%), Gaps = 66/581 (11%)

Query: 9    IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS---TT 65
            ++GIWGMGGIGKTT+AKA +++  H+FE   F+ +VR   E   G+  LQ+++LS    T
Sbjct: 593  LLGIWGMGGIGKTTIAKAAYNKIRHDFEAKSFLLNVREVWEQDNGVVSLQQRLLSDIYKT 652

Query: 66   LSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
               K+E          +ER+R  ++ +VLDDVN+V QL  L G  + FG+GSRI++TTRD
Sbjct: 653  TKIKIETVESG-KMILQERLRHKRIFLVLDDVNKVDQLNALCGSHEWFGEGSRIMITTRD 711

Query: 126  KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
              +L + + +   +YR+  ++  E+ E F   AFK+    E     S  VV Y+ G P+ 
Sbjct: 712  DDLLSRLKVD--YVYRMKEMDGNESLELFSWHAFKQPIPIEGFGDLSTDVVMYSGGLPIA 769

Query: 186  LEVLGSSLCL-KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSIFLDIAC 243
            L+V+GS L   +RK  W  VL  L  I   E   + + LKISF+ L+   VK IFLDIA 
Sbjct: 770  LQVIGSFLLTRRRKKEWKSVLEKLKLIPNDE---VLEKLKISFDGLSDDDVKEIFLDIAF 826

Query: 244  FFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQES 299
            FF G D++ V +IL+     +D+ + +L+ KSLV++   N + MHD+L++MGR+IVR++S
Sbjct: 827  FFIGMDQEEVTTILEGCGHFADIGISLLVQKSLVTVDRKNKIGMHDLLRDMGREIVRKKS 886

Query: 300  EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
             +   + SRLW  +++  VL        ++G+ L +S+     +D R +    +      
Sbjct: 887  IEISKEPSRLWRYEDVDSVLSKATRALDVKGLTLKMSR-----MDSRTYMETKD------ 935

Query: 360  YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
                F +I KL      + L  + VQL     YL + +R+L W  +PL+  P  F  ++L
Sbjct: 936  ----FEKINKL------KFLQLAGVQLEGNYKYLSRDIRWLCWHGFPLKYTPEEFHQEHL 985

Query: 420  VELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
            V ++L+ S +EQ W+          Q  K L  L+     +L+  P           +FS
Sbjct: 986  VAVDLKYSHLEQVWKKS--------QLLKELKFLNLSHSHNLKQTP-----------DFS 1026

Query: 480  YCVNLIEFPQISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
            Y  NL           +L L     +  V  +I  L  + +++L+ C  L  +  S  KL
Sbjct: 1027 YLPNL----------EKLILKDCPNLSSVSPNIGNLKKILLINLKDCTGLCELPRSIYKL 1076

Query: 539  RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP 579
            +S+ TLI+ GC  ++   E +E+M  L  + +D+T +T +P
Sbjct: 1077 KSVKTLIVSGCTKIDKLEEDIEQMTSLTILVADKTSVTRVP 1117



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/311 (35%), Positives = 170/311 (54%), Gaps = 21/311 (6%)

Query: 8   QIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS---T 64
           +++GIWGMGGIGKTT+AKA +++   +FE   F+ +VR   E   G+  LQ+++LS    
Sbjct: 90  RLLGIWGMGGIGKTTIAKAAYNKIHRDFEAKSFLLNVREVWEQDNGIVSLQQRLLSDIYK 149

Query: 65  TLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
           T   K+E          +ER+   ++ +VLDDVN++ QL  L G    FG+GSRI++TTR
Sbjct: 150 TTKIKIETVESG-KMILQERLCHKRIFLVLDDVNKLDQLNALCGSHGWFGEGSRIIITTR 208

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           D  +L + +     +YR+  ++  E+ E F    FK+    E     S  VV Y+ G+PL
Sbjct: 209 DDDLLGRLKVH--YVYRMKEMDSNESLELFSWHVFKQPIPIEGFGDLSTDVVKYSGGSPL 266

Query: 185 VLEVLGSSLCLKR-KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
            LEV+GS L  +R K  W  +L  L +    ++  I D+L++SF+ L+  +K  FLDIAC
Sbjct: 267 ALEVIGSFLLTRRSKKEWKSILEKLTK---PDVKLIPDMLRLSFDNLSDNIKETFLDIAC 323

Query: 244 F-FEGEDKDFVASILDDSESDV------LDILIDKSLVSI-SGNFLNMHDILQEMGRQIV 295
               G   D +  I    + DV      ++ L+  SLV I S   +   D+LQ +GR+I 
Sbjct: 324 LNLSGMSLDDLIQIF---KKDVHFKELGMEELVTISLVQIDSEKRIERDDLLQLLGREIR 380

Query: 296 RQESEKEPGKR 306
           +++S      R
Sbjct: 381 KEKSTAMAAGR 391



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 13/247 (5%)

Query: 499  LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
            L  S +E+V    + L +L+ L+L     LK+ +  F  L +L  LIL  C NL     +
Sbjct: 990  LKYSHLEQVWKKSQLLKELKFLNLSHSHNLKQ-TPDFSYLPNLEKLILKDCPNL---SSV 1045

Query: 559  LEKMEHLKRIY----SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
               + +LK+I      D T + ELP S   L  ++ L V  C+K+D L ++I  +  L  
Sbjct: 1046 SPNIGNLKKILLINLKDCTGLCELPRSIYKLKSVKTLIVSGCTKIDKLEEDIEQMTSLTI 1105

Query: 615  ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP 674
            ++A  ++++++P +V  S  +  +  S C G E F R     +    +   +   +  + 
Sbjct: 1106 LVADKTSVTRVPFAVVRSKSIGFI--SLC-GFEGFARNVFPSIIQSWMSPTN--GILPLV 1160

Query: 675  QEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID 734
            Q  A  SSLE      N+F  LP+  K +  L+ +  +  +  Q    L   L  LH   
Sbjct: 1161 QTFAGTSSLEFFDEQDNSFYGLPSFHKDLPNLQRLWFKCKSEAQLNQTLASILDNLHTKS 1220

Query: 735  CKMLQSL 741
            C+ L+++
Sbjct: 1221 CEELEAM 1227


>gi|357509247|ref|XP_003624912.1| TMV resistance protein N [Medicago truncatula]
 gi|355499927|gb|AES81130.1| TMV resistance protein N [Medicago truncatula]
          Length = 2106

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 193/581 (33%), Positives = 307/581 (52%), Gaps = 66/581 (11%)

Query: 9    IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS---TT 65
            ++GIWGMGGIGKTT+AKA +++  H+FE   F+ +VR   E   G+  LQ+++LS    T
Sbjct: 1225 LLGIWGMGGIGKTTIAKAAYNKIRHDFEAKSFLLNVREVWEQDNGVVSLQQRLLSDIYKT 1284

Query: 66   LSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
               K+E          +ER+R  ++ +VLDDVN+V QL  L G  + FG+GSRI++TTRD
Sbjct: 1285 TKIKIETVESG-KMILQERLRHKRIFLVLDDVNKVDQLNALCGSHEWFGEGSRIMITTRD 1343

Query: 126  KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
              +L + + +   +YR+  ++  E+ E F   AFK+    E     S  VV Y+ G P+ 
Sbjct: 1344 DDLLSRLKVD--YVYRMKEMDGNESLELFSWHAFKQPIPIEGFGDLSTDVVMYSGGLPIA 1401

Query: 186  LEVLGSSLCL-KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSIFLDIAC 243
            L+V+GS L   +RK  W  VL  L  I   E   + + LKISF+ L+   VK IFLDIA 
Sbjct: 1402 LQVIGSFLLTRRRKKEWKSVLEKLKLIPNDE---VLEKLKISFDGLSDDDVKEIFLDIAF 1458

Query: 244  FFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQES 299
            FF G D++ V +IL+     +D+ + +L+ KSLV++   N + MHD+L++MGR+IVR++S
Sbjct: 1459 FFIGMDQEEVTTILEGCGHFADIGISLLVQKSLVTVDRKNKIGMHDLLRDMGREIVRKKS 1518

Query: 300  EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
             +   + SRLW  +++  VL        ++G+ L +S+     +D R +    +      
Sbjct: 1519 IEISKEPSRLWRYEDVDSVLSKATRALDVKGLTLKMSR-----MDSRTYMETKD------ 1567

Query: 360  YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
                F +I KL      + L  + VQL     YL + +R+L W  +PL+  P  F  ++L
Sbjct: 1568 ----FEKINKL------KFLQLAGVQLEGNYKYLSRDIRWLCWHGFPLKYTPEEFHQEHL 1617

Query: 420  VELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
            V ++L+ S +EQ W+          Q  K L  L+     +L+  P           +FS
Sbjct: 1618 VAVDLKYSHLEQVWKKS--------QLLKELKFLNLSHSHNLKQTP-----------DFS 1658

Query: 480  YCVNLIEFPQISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
            Y  NL           +L L     +  V  +I  L  + +++L+ C  L  +  S  KL
Sbjct: 1659 YLPNL----------EKLILKDCPNLSSVSPNIGNLKKILLINLKDCTGLCELPRSIYKL 1708

Query: 539  RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP 579
            +S+ TLI+ GC  ++   E +E+M  L  + +D+T +T +P
Sbjct: 1709 KSVKTLIVSGCTKIDKLEEDIEQMTSLTILVADKTSVTRVP 1749



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/314 (35%), Positives = 175/314 (55%), Gaps = 22/314 (7%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS---TT 65
           ++G+WGMGGIGKTT+AKA +++  H+FE   F+ +VR   E   G+  LQ+Q+LS    T
Sbjct: 213 LLGVWGMGGIGKTTIAKAAYNKIHHDFEAKSFLPNVREVWEQDNGVVSLQQQLLSDIYKT 272

Query: 66  LSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
              K++          +ER+R  ++ +VLDDVN++ QL  L G    FG+GSRI++TTRD
Sbjct: 273 TKIKIDTVESG-KMILQERLRHKRIFLVLDDVNKLDQLNALCGSHGWFGEGSRIIITTRD 331

Query: 126 KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
             +L + +     +YR+  ++  E+ E F   AFK+    E     S  VV Y++G PL 
Sbjct: 332 DDLLGRLKVH--YVYRMKEMDSNESLELFSWHAFKQPIPIEGFGELSTDVVKYSRGLPLA 389

Query: 186 LEVLGSSLCL-KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
           L+V+GS L   +RK  W +VL  L +  +     I ++LK+ F+ L+  +K  FLDIAC 
Sbjct: 390 LQVIGSFLLTRRRKKVWKRVLEKLTKPDDK----IQEVLKLIFDNLSDNIKETFLDIACL 445

Query: 245 -FEGEDKDFVASILDDSESDV------LDILIDKSLVSI-SGNFLNMHDILQEMGRQIVR 296
              G   D +  I    + DV      ++ L+   LV++ S   + MHD++Q  GR+I +
Sbjct: 446 NLSGMSLDDLLQIF---QKDVHFTELGMEELVINGLVNLDSEKRIGMHDLVQLFGREIRQ 502

Query: 297 QESEKEPGKRSRLW 310
           ++S       S++W
Sbjct: 503 EKSTGMAAVSSKIW 516



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/311 (35%), Positives = 170/311 (54%), Gaps = 21/311 (6%)

Query: 8    QIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS---T 64
            +++GIWGMGGIGKTT+AKA +++   +FE   F+ +VR   E   G+  LQ+++LS    
Sbjct: 722  RLLGIWGMGGIGKTTIAKAAYNKIHRDFEAKSFLLNVREVWEQDNGIVSLQQRLLSDIYK 781

Query: 65   TLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            T   K+E          +ER+   ++ +VLDDVN++ QL  L G    FG+GSRI++TTR
Sbjct: 782  TTKIKIETVESG-KMILQERLCHKRIFLVLDDVNKLDQLNALCGSHGWFGEGSRIIITTR 840

Query: 125  DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
            D  +L + +     +YR+  ++  E+ E F    FK+    E     S  VV Y+ G+PL
Sbjct: 841  DDDLLGRLKVH--YVYRMKEMDSNESLELFSWHVFKQPIPIEGFGDLSTDVVKYSGGSPL 898

Query: 185  VLEVLGSSLCLKR-KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
             LEV+GS L  +R K  W  +L  L +    ++  I D+L++SF+ L+  +K  FLDIAC
Sbjct: 899  ALEVIGSFLLTRRSKKEWKSILEKLTK---PDVKLIPDMLRLSFDNLSDNIKETFLDIAC 955

Query: 244  F-FEGEDKDFVASILDDSESDV------LDILIDKSLVSI-SGNFLNMHDILQEMGRQIV 295
                G   D +  I    + DV      ++ L+  SLV I S   +   D+LQ +GR+I 
Sbjct: 956  LNLSGMSLDDLIQIF---KKDVHFKELGMEELVTISLVQIDSEKRIERDDLLQLLGREIR 1012

Query: 296  RQESEKEPGKR 306
            +++S      R
Sbjct: 1013 KEKSTAMAAGR 1023



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 13/247 (5%)

Query: 499  LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
            L  S +E+V    + L +L+ L+L     LK+ +  F  L +L  LIL  C NL     +
Sbjct: 1622 LKYSHLEQVWKKSQLLKELKFLNLSHSHNLKQ-TPDFSYLPNLEKLILKDCPNL---SSV 1677

Query: 559  LEKMEHLKRIY----SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
               + +LK+I      D T + ELP S   L  ++ L V  C+K+D L ++I  +  L  
Sbjct: 1678 SPNIGNLKKILLINLKDCTGLCELPRSIYKLKSVKTLIVSGCTKIDKLEEDIEQMTSLTI 1737

Query: 615  ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP 674
            ++A  ++++++P +V  S  +  +  S C G E F R     +    +   +   +  + 
Sbjct: 1738 LVADKTSVTRVPFAVVRSKSIGFI--SLC-GFEGFARNVFPSIIQSWMSPTN--GILPLV 1792

Query: 675  QEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID 734
            Q  A  SSLE      N+F  LP+  K +  L+ +  +  +  Q    L   L  LH   
Sbjct: 1793 QTFAGTSSLEFFDEQDNSFYGLPSFHKDLPNLQRLWFKCKSEAQLNQTLASILDNLHTKS 1852

Query: 735  CKMLQSL 741
            C+ L+++
Sbjct: 1853 CEELEAM 1859


>gi|147782877|emb|CAN67859.1| hypothetical protein VITISV_009855 [Vitis vinifera]
          Length = 1383

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 196/587 (33%), Positives = 285/587 (48%), Gaps = 113/587 (19%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+AKAI+++ S +++G  F+ ++                                   
Sbjct: 216 KTTIAKAIYNEISDQYDGRSFLRNI----------------------------------- 240

Query: 80  FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKI 139
             KER +                   L  E D F   S I++T+RDK VL ++  +    
Sbjct: 241 --KERSKEY-----------------LAEEKDWFQAKSTIIITSRDKHVLARYGVDIP-- 279

Query: 140 YRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKS 199
           Y V+ L  EEA E F  +AFK+NH  +     S +++ Y  G PL L+VLG+SL  K+ S
Sbjct: 280 YEVSKLNKEEAIELFSLWAFKQNHPKKVYKNLSYNIIDYANGLPLALKVLGASLFGKKIS 339

Query: 200 HWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDD 259
            W   L  L  I   EIH++   L+ISF+ L    K +FLD+ACFF+G+DKDFV+ IL  
Sbjct: 340 EWESALCKLKIIPHMEIHNV---LRISFDGLDDIDKGMFLDVACFFKGDDKDFVSRILGP 396

Query: 260 SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVL 319
               V+  L  + L++IS N L+MHD++Q MG +++RQE  ++PG+RSRLWD      VL
Sbjct: 397 HAEHVITTLAYRCLITISKNMLDMHDLIQLMGWEVIRQECPEDPGRRSRLWDSNAY-HVL 455

Query: 320 KHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQL 379
             N GT AIEG+FLD        L  ++F  M+ LRL K + P+     KL         
Sbjct: 456 IGNTGTRAIEGLFLDRW------LTTKSFKEMNRLRLLKIHNPR----RKL--------- 496

Query: 380 SYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKAC 439
            + +  LP   ++   +  YLHWD YPL +LP NF  KNLVEL LR S ++Q W G K  
Sbjct: 497 -FLEDHLPRDFEFSSYEYTYLHWDRYPLESLPLNFHAKNLVELLLRNSNIKQLWRGSK-- 553

Query: 440 VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
                                       LH    V I+ SY V+LI  P  S       L
Sbjct: 554 ----------------------------LHDKLRV-IDLSYSVHLIRIPDFSSVPNLEIL 584

Query: 500 G-QSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE-HFPE 557
             + +I ++PSSI  L  L+ L L+ C +L +I    C L SL  L L  C  +E   P 
Sbjct: 585 TLEGSIRDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHCNIMEGGIPS 644

Query: 558 ILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
            +  +  L+++  +R   + +P++   L  LEVL +  C+ L+ +P+
Sbjct: 645 DICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCNNLEQIPE 691



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 130/237 (54%), Gaps = 3/237 (1%)

Query: 489  QISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG 548
            Q  G   +   G S + EVP  IE   +L+ L L GCK L  + +  C  +SL TL   G
Sbjct: 924  QCDGARRKRCFGCSDMNEVPI-IENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSG 982

Query: 549  CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGS 608
            C  L+ FP+IL+ ME+L+ +Y DRT I E+PSS E L GL+ L + +C  L NLPD+I +
Sbjct: 983  CSQLKSFPDILQDMENLRNLYLDRTAIKEIPSSIERLRGLQHLTLINCINLVNLPDSICN 1042

Query: 609  LEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD 667
            L  L  + +       +LP ++     L  L   H   + +F    L GL ++G L +  
Sbjct: 1043 LTSLRKLSVQRCPNFKKLPDNLGRLQSLLHLRVGHLDSM-NFQLPSLSGLCSLGTLMLHA 1101

Query: 668  YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
              +REIP EI  LSSLE L L+GN+F  +P  I Q+  L F+ L    MLQ +PELP
Sbjct: 1102 CNIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELP 1158



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 107/234 (45%), Gaps = 35/234 (14%)

Query: 429  VEQPWEGEKACV---------PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
            +E P E ++ C+         PS I NFK L+ L   GC  L+SFP  L           
Sbjct: 945  IENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLKSFPDIL----------- 993

Query: 480  YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
                     Q    +  LYL ++AI+E+PSSIE L  L+ L L  C  L  +  S C L 
Sbjct: 994  ---------QDMENLRNLYLDRTAIKEIPSSIERLRGLQHLTLINCINLVNLPDSICNLT 1044

Query: 540  SLVTLILLGCLNLEHFPEILEKME---HLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
            SL  L +  C N +  P+ L +++   HL+  + D     +LP S   L  L  L +  C
Sbjct: 1045 SLRKLSVQRCPNFKKLPDNLGRLQSLLHLRVGHLDSMNF-QLP-SLSGLCSLGTLMLHAC 1102

Query: 597  SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
            + +  +P  I SL  L  +  A +  S++P  ++    L  LD SHCK L+  P
Sbjct: 1103 N-IREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHIP 1155



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 24/201 (11%)

Query: 553 EHFPEILEKMEH-LKRIYSDRTPITELPSSFENLPGLEVLF----VEDCSKLDNLPDNIG 607
           +H P   E   +    ++ DR P+  LP +F     +E+L     ++   +   L D + 
Sbjct: 500 DHLPRDFEFSSYEYTYLHWDRYPLESLPLNFHAKNLVELLLRNSNIKQLWRGSKLHDKLR 559

Query: 608 SLEYLYY----------------ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
            ++  Y                 IL    +I  LPSS+   N L++L    C  L   P 
Sbjct: 560 VIDLSYSVHLIRIPDFSSVPNLEILTLEGSIRDLPSSITHLNGLQTLLLQECLKLHQIP- 618

Query: 652 TFLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
             +  LS++  L +    + E  IP +I +LSSL+ L L   +F S+P  I Q+S+L  +
Sbjct: 619 NHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVL 678

Query: 710 HLEDFNMLQSLPELPLCLKYL 730
           +L   N L+ +PELP  L+ L
Sbjct: 679 NLSHCNNLEQIPELPSRLRLL 699



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 117/291 (40%), Gaps = 46/291 (15%)

Query: 508  PSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKR 567
            PSS   + + +  D+R C          C+          GC ++   P I   +E  + 
Sbjct: 903  PSSKPSINNTKGADVRICNE--------CQCDGARRKRCFGCSDMNEVPIIENPLELDRL 954

Query: 568  IYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPS 627
                   +T LPS   N   L  L    CS+L + PD +  +E L  +    +AI ++PS
Sbjct: 955  CLLGCKNLTSLPSGICNFKSLATLCCSGCSQLKSFPDILQDMENLRNLYLDRTAIKEIPS 1014

Query: 628  SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
            S+     L+ L   +C  L + P       S   L  +   +V+  P             
Sbjct: 1015 SIERLRGLQHLTLINCINLVNLPD------SICNLTSLRKLSVQRCP------------- 1055

Query: 688  LSGNNFESLP---AIIKQMSQLRFIHLEDFNMLQSLPELP-LC-LKYLHLIDCKMLQSLP 742
                NF+ LP     ++ +  LR  HL+  N    LP L  LC L  L L  C  ++ +P
Sbjct: 1056 ----NFKKLPDNLGRLQSLLHLRVGHLDSMNF--QLPSLSGLCSLGTLMLHACN-IREIP 1108

Query: 743  VLPFCLESLD---LTGCNMLRSLPE---LPLCLQYLNLEDCNMLRSLPELP 787
               F L SL+   L G N    +P+       L +L+L  C ML+ +PELP
Sbjct: 1109 SEIFSLSSLERLCLAG-NHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELP 1158



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 26/231 (11%)

Query: 577 ELPSSFENLPGLEVLFVE-DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
            LP  FE     E  ++  D   L++LP N  + + L  +L   S I QL     L + L
Sbjct: 501 HLPRDFE-FSSYEYTYLHWDRYPLESLPLNFHA-KNLVELLLRNSNIKQLWRGSKLHDKL 558

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAMGLLHIS--DYAVREIPQEIAYLSSLEILYLSGN-N 692
           R +D S+   L   P       S++  L I   + ++R++P  I +L+ L+ L L     
Sbjct: 559 RVIDLSYSVHLIRIP-----DFSSVPNLEILTLEGSIRDLPSSITHLNGLQTLLLQECLK 613

Query: 693 FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLD 752
              +P  I  +S L+ + L   N+++      +C    HL     LQ L +      S+ 
Sbjct: 614 LHQIPNHICHLSSLKELDLGHCNIMEGGIPSDIC----HL---SSLQKLNLERGHFSSIP 666

Query: 753 LTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQS 803
            T   + R        L+ LNL  CN L  +PELP  L+LL     NR  S
Sbjct: 667 TTINQLSR--------LEVLNLSHCNNLEQIPELPSRLRLLDAHGSNRTSS 709


>gi|357513283|ref|XP_003626930.1| TMV resistance protein N [Medicago truncatula]
 gi|355520952|gb|AET01406.1| TMV resistance protein N [Medicago truncatula]
          Length = 1091

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 186/565 (32%), Positives = 283/565 (50%), Gaps = 70/565 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSET-AGGLEHLQKQML 62
           S  V +VGIWGMGG GKTT+AKAI+++    F+ + F+ ++R   E    G  HLQ+Q+L
Sbjct: 214 SGDVCMVGIWGMGGSGKTTVAKAIYNEIHRRFDCTSFIENIREVCEKDTKGHIHLQQQLL 273

Query: 63  STTLSEKLEVAGPNIPHFTKER-VRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
           S  L  K ++        T +R +   K L++LDDV +  Q+K L G    FG GS ++V
Sbjct: 274 SDVLKTKEKIHSIASGTATIQRELTGKKALVILDDVTDFQQIKALCGNHKFFGAGSVLIV 333

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRD  +L+    +   +Y++  ++  E+ E F   AF++       +  SR+V +Y  G
Sbjct: 334 TTRDVHILKLLNVDS--VYKMEEMQKNESLELFSWHAFRKASPRGGFSELSRNVAAYCGG 391

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP-RVKSIFLD 240
            PL LEVLGS L  + K  W  VL  L RI   ++H+    L+IS++ L    VK IFLD
Sbjct: 392 LPLALEVLGSYLFERTKQEWISVLSKLERIPNDQVHEK---LRISYDGLKDDMVKDIFLD 448

Query: 241 IACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSI-SGNFLNMHDILQEMGRQIVR 296
           I CFF G+D+ +V  IL+     +D+ + +LID+SL+ +   N L MHD++++MGR+IVR
Sbjct: 449 ICCFFIGKDRAYVTEILNGCGLYADIGIAVLIDRSLLKVEKNNKLGMHDLIRDMGREIVR 508

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
           + S +EPGKRSRLW  +++  VL  N GT+ +E +  +L +    +     F +M  LRL
Sbjct: 509 ESSAREPGKRSRLWFHEDVHDVLAKNTGTETVEALIFNLQRTGRGSFSTNTFQDMKKLRL 568

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
                                 L   +V L     YL K+LR+++W       +P++F  
Sbjct: 569 ----------------------LQLDRVDLTGDFGYLSKQLRWVNWQRSTFNFVPNDFDQ 606

Query: 417 KNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY---------------LSALSFKGCQSL 461
           +NLV   L+ S V+Q W+  K      I N  +               L  L  K CQSL
Sbjct: 607 ENLVAFELKYSNVKQVWKETKLLHKLKILNLSHSKHLKRTPDFSKLPNLEKLIMKDCQSL 666

Query: 462 RSF-PSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVL 520
               PS       + IN   C +L+  P+                     I  L  ++ L
Sbjct: 667 SDIHPSIGDLKNLLLINLKDCASLVNLPR--------------------EIYRLRSVKTL 706

Query: 521 DLRGCKRLKRISTSFCKLRSLVTLI 545
            L GC ++ ++     +++SL TLI
Sbjct: 707 ILSGCSKIVKLEEDIVQMKSLTTLI 731



 Score = 40.8 bits (94), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 155/410 (37%), Gaps = 105/410 (25%)

Query: 547 LGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNI 606
           L  LNL H        +HLKR     TP       F  LP LE L ++DC  L ++  +I
Sbjct: 632 LKILNLSH-------SKHLKR-----TP------DFSKLPNLEKLIMKDCQSLSDIHPSI 673

Query: 607 GSLEYLYYILAA-ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHI 665
           G L+ L  I     +++  LP  +     +++L  S C  +       ++ + ++  L  
Sbjct: 674 GDLKNLLLINLKDCASLVNLPREIYRLRSVKTLILSGCSKIVKLEED-IVQMKSLTTLIA 732

Query: 666 SDYAVREIPQEIAYLSSLEILYLSGNNFESL-----PAII-KQMSQLRFIHLEDFNMLQS 719
            +  V+++P  I  + S  I ++S   ++ L     P+II   MS            + S
Sbjct: 733 ENAGVKQVPFSI--VRSKNITHISLCGYQGLSRDVFPSIIWSWMSP----------TMNS 780

Query: 720 LPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM 779
           L  +P               S   +   L SL++   N       L L  Q   L  C+ 
Sbjct: 781 LARIP---------------SFGGISMSLVSLNIDSDN-------LGLVYQSPILSSCSK 818

Query: 780 LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSA 839
           LR       C+ +         Q L   L  L EL+ S   ++S    DL     SL+S 
Sbjct: 819 LR-------CVSVQCHSEIQLKQELKVFLNDLTELEISHASQIS----DL-----SLQSL 862

Query: 840 AICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPG 899
            I                     S  ++      SL  G  +A N+     R S   LPG
Sbjct: 863 LIGM------------------GSYHKVNETLGKSLSQG--LATNDS----RASF--LPG 896

Query: 900 SEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDS--KKVDSDCF 947
           + IP W +    G S+C Q+P  S+C  + G   C +  S  K + ++C 
Sbjct: 897 NNIPSWLAYTCEGPSVCFQVPKDSNC-GMKGITLCVLYSSTLKNMATECL 945


>gi|334186704|ref|NP_193687.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658794|gb|AEE84194.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1744

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 248/914 (27%), Positives = 381/914 (41%), Gaps = 215/914 (23%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            ++ +GIWGM GIGKTTLA+A +DQ S +FE SCF+ D     +  G    L+KQ+     
Sbjct: 190  IRSLGIWGMAGIGKTTLARAAYDQLSRDFEASCFIEDFDREFQEKGFFGLLEKQLGVNPQ 249

Query: 67   SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
              +L +          + +R  ++L+VLDDV +       + E D  G GS I+VT++DK
Sbjct: 250  VTRLSI--------LLKTLRSKRILLVLDDVRKPLGATSFLCEFDWLGPGSLIIVTSQDK 301

Query: 127  RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVL 186
            +VL + +  E  IY+V GL   E+ + F   AF ++   ++L   S   V Y  GNPL L
Sbjct: 302  QVLVQCQVNE--IYKVQGLNKHESLQLFSRCAFGKDVPDQNLLELSMKFVDYANGNPLAL 359

Query: 187  EVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFE 246
             + G +L  K       V+ +L R    +   I+  LK S++ L+   K IFLDI   F 
Sbjct: 360  SICGKNLKGKTPLDMKSVVLELKRHLSDK---IFVKLKSSYDALSVSEKEIFLDIVFTFR 416

Query: 247  GEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEP 303
            G + D V   L          ++ L+DKS V++S N + +++++ ++G +I+  +S+ E 
Sbjct: 417  GANVDNVMQSLAGCGFFPRVGIEALVDKSFVTVSENRVQVNNLIYDVGLKIINDQSD-EI 475

Query: 304  GKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR--------AFTNMSNLR 355
            G   R  D      +++H +  ++ +G       +K INLD          AF +M NLR
Sbjct: 476  GMCYRFVDASNSQSLIEHKEIRESEQG----YEDVKAINLDTSNLPFKGHIAFQHMYNLR 531

Query: 356  LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
                Y             S+        + LP    +LP +LR LHW  YPL + P NF 
Sbjct: 532  YLTIY-------------SSINPTKDPDLFLPGDPQFLPPELRLLHWTCYPLHSFPQNFG 578

Query: 416  PKNLVELNLRCSKVEQPWEGEK----------ACVPS--SIQNFKY---LSALSFKGCQS 460
             + LVELN+ CSK+++ W G K          +C     ++   +Y   +  +  KGC  
Sbjct: 579  FQYLVELNMPCSKLKKLWGGTKNLEVLKRITLSCSVQLLNVDELQYSPNIEKIDLKGCLE 638

Query: 461  LRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPS----------- 509
            L+SFP          ++ S C  +  FP++   + +L+L  + I ++ S           
Sbjct: 639  LQSFPDTGQLQHLRIVDLSTCKKIKSFPKVPPSIRKLHLQGTGIRDLSSLNHSSESQRLT 698

Query: 510  ------------------------------SIECLTDLEVLDLRGC-------------K 526
                                           I     LEVLD  GC             K
Sbjct: 699  RKLENVSSSNQDHRKQVLKLKDSSHLGSLPDIVIFESLEVLDFSGCSELEDIQGFPQNLK 758

Query: 527  RL-------KRISTSFC-------------------------KLRSLVTLILLGCLNLEH 554
            RL       K + +S C                          ++ L  L L GC NLE+
Sbjct: 759  RLYLAKTAIKEVPSSLCHHISKLVKLDMENCERLRDLPMGMSNMKYLAVLKLSGCSNLEN 818

Query: 555  FPEILEKMEHLKRIYSDRTPITELPSS-FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
              E+     +LK +Y   T + E PS+  E L  + +L +E+C KL  LP  +  LE+L 
Sbjct: 819  IKEL---PRNLKELYLAGTAVKEFPSTLLETLSEVVLLDLENCKKLQGLPTGMSKLEFLV 875

Query: 614  Y---------------------ILAAASAISQLPSSVALS-------------------- 632
                                  +  A +AI +LP S+                       
Sbjct: 876  MLKLSGCSKLEIIVDLPLNLIELYLAGTAIRELPPSIGDLALLDTLDLKNCNRLRHLPME 935

Query: 633  ----NMLRSLDSSHCKGLESF-----------------------PRTFLLGLSAMGLLHI 665
                N L+ LD S+C  LE F                       P  F +       L +
Sbjct: 936  MHNLNPLKVLDLSNCSELEVFTSSLPKVRELRPAPTVMLLRSKLPFCFFIFYEHRVTLSL 995

Query: 666  SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
                ++ IP+EI ++ SL+ L LS N F  +P  IK  S+L  + L     L+SLP+LP 
Sbjct: 996  YKARLQYIPEEIRWMPSLKTLDLSRNGFTEVPVSIKDFSKLLSLRLRYCENLRSLPQLPR 1055

Query: 726  CLKYLHLIDCKMLQ 739
             L+ L+   C  LQ
Sbjct: 1056 SLQLLNAHGCSSLQ 1069


>gi|356577841|ref|XP_003557030.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like,
           partial [Glycine max]
          Length = 1034

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 185/591 (31%), Positives = 306/591 (51%), Gaps = 73/591 (12%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFV-SDVRGNSETAGGLEHLQKQ 60
           D S    ++GIWGMGG+GKTT+AK+I+++F  +     F+ ++ +G+++       LQ++
Sbjct: 204 DQSGRGCVIGIWGMGGLGKTTIAKSIYNEFRRQRFRRSFIETNNKGHTD-------LQEK 256

Query: 61  MLSTTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           +LS  L  K+++    +     ++++   + LI+LDDV E  QLK L G      + S +
Sbjct: 257 LLSDVLKTKVKIHSVAMGISMIEKKLFAERALIILDDVTEFEQLKALCGNCKWIDRESVL 316

Query: 120 VVTTRDKRVLEKFRGEEK-KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           ++TTRD R+LE+ +      I+++  ++  E+ E F   AF+E    E+ N  S  VV+Y
Sbjct: 317 IITTRDLRLLEELKDHHAVHIWKIMEMDENESLELFSKHAFREASPTENWNKLSIDVVAY 376

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL-TPRVKSI 237
             G PL LE+LGS L  + K  W  VL  L +I     + + + L+ISF+ L  P  K I
Sbjct: 377 CAGLPLALEILGSYLRWRTKEEWESVLSKLKKIPN---YKVQEKLRISFDGLRDPMEKDI 433

Query: 238 FLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FLD+ CFF G+D+ +V  ILD      S  + +LI+ SL+ +  N L MH +L++MGR+I
Sbjct: 434 FLDVCCFFIGKDRTYVTEILDGCGLHASIGIKVLIEHSLIKVEKNKLGMHPLLRDMGREI 493

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V + S+ EPGKR+RLW  K++  VL +N GT+ I+G+ + L      + +  +F  M  L
Sbjct: 494 VCESSKNEPGKRNRLWFQKDVLDVLTNNTGTETIQGLAVKLHFTSRDSFEAYSFEKMKGL 553

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL                      L    VQL     YL K+L+++ W  +PL+ +P+NF
Sbjct: 554 RL----------------------LQLDHVQLSGNYGYLSKQLKWICWRGFPLKYIPNNF 591

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             + ++ ++ + SK+   W+      P  +   K+L                        
Sbjct: 592 HLEGVIAIDFKYSKLRLLWK-----TPQVLPWLKFL------------------------ 622

Query: 475 TINFSYCVNLIEFPQIS--GKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
             N S+  NL E P  S    + +L L    ++ +V  SI  L +L +++L+GC  L+ +
Sbjct: 623 --NLSHSKNLTETPDFSKLTSLEKLILRNCPSLCKVHQSIGDLHNLILINLKGCTSLRNL 680

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
                KL+S+  LIL GC  ++   E + +ME L  + +D T + ++P S 
Sbjct: 681 PREVYKLKSVKILILSGCSKIDKLEEDIVQMESLTTLIADNTAVKQVPFSI 731


>gi|15242300|ref|NP_199319.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758979|dbj|BAB09489.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007813|gb|AED95196.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1165

 Score =  265 bits (676), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 205/680 (30%), Positives = 330/680 (48%), Gaps = 66/680 (9%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            +++G+ GM GIGKTTL K ++  +  +F     +  +RG S        L+        
Sbjct: 229 TRVIGVVGMPGIGKTTLVKELYKTWQGKFSRYALIDQIRGKSNNF----RLECLPTLLLE 284

Query: 67  SEKLEVAGPNI-----PHFT-KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ----- 115
               E+  P +     P+ T K  +R  K+L+VLDDV+   Q+  L+G+ D   +     
Sbjct: 285 KLLPELNNPQLDSIEEPYKTHKGLLRERKVLVVLDDVSRREQIYALLGKYDLHSKHEWIK 344

Query: 116 -GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHC-PEDLNWH-- 171
            GSRI++ T D   +   +G     Y V  L   +  + F   AF  +   P  +++   
Sbjct: 345 DGSRIIIATND---ISSLKGLVHDTYVVRQLNHRDGLQLFRYHAFHYDQATPPKVDFMKL 401

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT 231
           S   V Y +G+PL L++LG  L  K   HW   L  L    +S    I +++++S+++L+
Sbjct: 402 SDEFVHYARGHPLALKILGRELYEKNMKHWETKLIIL---AQSPTTYIGEVVQVSYDELS 458

Query: 232 PRVKSIFLDIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNFLNMHDILQ 288
              K  FLDIACF   +D D+V S+L   D   ++ +  L +K L+      + MHD+L 
Sbjct: 459 LAQKDAFLDIACF-RSQDVDYVESLLVSSDPGSAEAIKALKNKFLIDTCDGRVEMHDLLY 517

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIK-GINLDPRA 347
              R++  + S +   K+ RLW  ++I  V +   G   + GIFLDLS++K   +LD   
Sbjct: 518 RFSRELDLKASTQGGSKQRRLWVRQDIINVQQKTMGAANVRGIFLDLSEVKVETSLDREH 577

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F NM NLR  K Y           S    E L+ +K+ +P+GL+   K++R LHW  +PL
Sbjct: 578 FKNMRNLRYLKLY----------NSHCPHECLTNNKINMPDGLELPLKEVRCLHWLKFPL 627

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEG---------------EKACVPSSIQNFKYLSA 452
             LP++F P NLV+L L  S++E+ W+G                K C  S +   + L  
Sbjct: 628 EELPNDFDPINLVDLKLPYSEIERLWDGVKDTPVLKWVDLNHSSKLCSLSGLSKAQNLQR 687

Query: 453 LSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIE 512
           L+ +GC SL S   +++     T+  S C N  EFP I   +  LYL  ++I ++P ++ 
Sbjct: 688 LNLEGCTSLESL-RDVNLTSLKTLTLSNCSNFKEFPLIPENLKALYLDGTSISQLPDNVG 746

Query: 513 CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR 572
            L  L +L+++ CK L+ I T   +L++L  L+L GC  L+ FPEI      LK +  D 
Sbjct: 747 NLKRLVLLNMKDCKVLETIPTCVSELKTLQKLVLSGCSKLKEFPEI--NKSSLKILLLDG 804

Query: 573 TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVAL 631
           T I  +P     LP ++ L +     L  LP  I  +  L  + L   + ++ +P    L
Sbjct: 805 TSIKTMP----QLPSVQYLCLSRNDHLIYLPAGINQVSQLTRLDLKYCTKLTYVPE---L 857

Query: 632 SNMLRSLDSSHCKGLESFPR 651
              L+ LD+  C  L++  +
Sbjct: 858 PPTLQYLDAHGCSSLKNVAK 877



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 218/482 (45%), Gaps = 44/482 (9%)

Query: 574  PITELPSSFE--NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVA 630
            P+ ELP+ F+  NL  L++ +    S+++ L D +     L ++ L  +S +  L S ++
Sbjct: 626  PLEELPNDFDPINLVDLKLPY----SEIERLWDGVKDTPVLKWVDLNHSSKLCSL-SGLS 680

Query: 631  LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
             +  L+ L+   C  LES     L  L  + L + S++  +E P       +L+ LYL G
Sbjct: 681  KAQNLQRLNLEGCTSLESLRDVNLTSLKTLTLSNCSNF--KEFP---LIPENLKALYLDG 735

Query: 691  NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH---LIDCKMLQSLPVLPFC 747
             +   LP  +  + +L  ++++D  +L+++P     LK L    L  C  L+  P +   
Sbjct: 736  TSISQLPDNVGNLKRLVLLNMKDCKVLETIPTCVSELKTLQKLVLSGCSKLKEFPEINKS 795

Query: 748  LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPE-LPLCLQL--LTVRNCNRLQSL 804
               + L     ++++P+LP  +QYL L   + L  LP  +    QL  L ++ C +L  +
Sbjct: 796  SLKILLLDGTSIKTMPQLP-SVQYLCLSRNDHLIYLPAGINQVSQLTRLDLKYCTKLTYV 854

Query: 805  PEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSL 864
            PE+   LQ LDA     L   +  L     ++++    F FTNC  L   A  +I + + 
Sbjct: 855  PELPPTLQYLDAHGCSSLKNVAKPLARIMSTVQNH-YTFNFTNCGNLEQAAKEEITSYAQ 913

Query: 865  LRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSS 924
             + + ++ A  R  Y    NE    L  +    PG E+P WF +++ GS +  +L PH  
Sbjct: 914  RKCQLLSDA--RKHY----NEGSEALFST--CFPGCEVPSWFGHEAVGSLLQRKLLPHWH 965

Query: 925  CRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSE---TKHVDLGYNSRYIEDL 981
             + L G A CAV+ S     D    F V+  F ++ +  S    T  V +       +D 
Sbjct: 966  DKRLSGIALCAVV-SFPDSQDQLSCFSVTCTFKIKAEDKSWVPFTCPVGIWTREGNKKDR 1024

Query: 982  IDSDRVILGFKP------CLNVGFPDGYHHTIATFKFFAERK-----FYKIKRCGLCPVY 1030
            I+SD V + +        CL     D  + + A+ +F           +K+ +CGL  VY
Sbjct: 1025 IESDHVFIAYISSPHSIRCLEEKNSDKCNFSEASLEFTVTSDTSGIGVFKVLKCGLSLVY 1084

Query: 1031 AN 1032
             N
Sbjct: 1085 EN 1086


>gi|297800420|ref|XP_002868094.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313930|gb|EFH44353.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1247

 Score =  264 bits (675), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 254/912 (27%), Positives = 414/912 (45%), Gaps = 176/912 (19%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S   ++VGIWG  GIGK+T+ +A+F Q S +F    FV+    + + +G     +K++LS
Sbjct: 203  SKVARMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFVTYKSTSGDVSGMKLSWEKELLS 262

Query: 64   TTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
              L +K      N+ HF   ++R++  K+LI+LDDV+ +  LK L+G+ + FG GSR++V
Sbjct: 263  KILGQK----DINMEHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKTEWFGPGSRMIV 318

Query: 122  TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
             T+D+++L+    +   +Y V       A +  C  AF ++  P+DL   +  V   T  
Sbjct: 319  ITQDRQLLKAH--DIDLLYEVKLPSQGLALKMLCRSAFGKDSPPDDLKELAVEVAKLTGN 376

Query: 182  NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
             PL L +LGSSL  + K  W +++  L         DI   L++S+++L    + +FL I
Sbjct: 377  LPLGLSILGSSLKGRDKDEWMEMMPRLRNGLNG---DIMKTLRVSYDRLDKEDQDMFLHI 433

Query: 242  ACFFEGEDKDFVASILDDSESD--VLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQE 298
            AC F G    F  S +DD   D   L  L+DKSL+ I+   ++ MH++L+++GR+I R E
Sbjct: 434  ACLFNG----FRVSSVDDLCKDNVGLTTLVDKSLMRITPKGYIEMHNLLEKLGREIDRAE 489

Query: 299  SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGI--FLDLSKIKGINLDPRAFTNMSNLRL 356
                  KR  L + ++I  VL    GT    GI  + D  + + +++D ++F  M NL+ 
Sbjct: 490  CNGNLRKRRFLTNFEDIEEVLTEKTGTKTAVGIRLYTDYGEKRLLSIDEKSFKGMDNLQY 549

Query: 357  FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
               +                       ++LP GL +LP KLR L W+ +PL++LPS FK 
Sbjct: 550  LSVFNCSI------------------NIKLPRGLFFLPYKLRLLEWENFPLKSLPSTFKA 591

Query: 417  KNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI 476
            K LVEL +  SK+E+ WEG         Q    L  ++  G + L+  P           
Sbjct: 592  KYLVELIMVDSKLEKLWEG--------TQPLGRLKKMNMCGSKYLKEIP----------- 632

Query: 477  NFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFC 536
            + S  +NL +          LY G S++  +PSSI+    L  L+  G   L   S    
Sbjct: 633  DLSKAINLEKLD--------LY-GCSSLVTLPSSIQNAIKLRKLNCSG--ELLIDSKPLE 681

Query: 537  KLRSLVTLILLGCLNLE------HFPEILE----------------KMEHLKRIYSDRTP 574
             +R+L  L +L   N++      HFP  L                 K E+L  +    + 
Sbjct: 682  GMRNLQYLSVLNWSNMDLPQGIVHFPHKLISLRWYEFPLKCLPSNFKAEYLVELIMVNSK 741

Query: 575  ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
            + +L    + L  L+ + + +   L  +PD   ++      L+  S++  LPSS+  +  
Sbjct: 742  LEKLWERNQPLGSLKTMNLSNSKYLKEIPDLSNAINLEEVELSGCSSLVALPSSIQNAIK 801

Query: 635  LRSLDSSHCKGLESFPRTFLLG----LSAMGLLHISDYAVREIPQ----------EI--- 677
            L  LD S C+ LESFP    L     L   G L++ ++   ++            EI   
Sbjct: 802  LNYLDMSECRKLESFPTHLNLKSLEYLDLTGCLNLRNFPAIQMGNLYGFPLDSIFEIEVK 861

Query: 678  ---------------------------AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIH 710
                                        YL SL++    GN  E L   ++ +  L +++
Sbjct: 862  DCFWNKNLPGLNYLDCLMGCMPCKFSPEYLVSLDV---RGNKLEKLWEGVQSLGSLEWMN 918

Query: 711  LEDFNMLQSLPELPLC--LKYLHLIDCKMLQSLP---------------------VLPF- 746
            L +   L  +P+L     LK  +L  CK L +LP                     VLP  
Sbjct: 919  LSECENLTEIPDLSKATNLKRFYLNGCKSLVTLPSTIENLQNLLGLEMKGCTRLEVLPTD 978

Query: 747  ----CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQ 802
                 L+ LDL+GC+ LRS P +   +++L L++     ++ E+P C++     N +RL 
Sbjct: 979  VNLSSLDILDLSGCSSLRSFPLISWNIKWLYLDNT----AIVEVPCCIE-----NFSRLT 1029

Query: 803  SLPEILLCLQEL 814
             L  ++ C Q L
Sbjct: 1030 VL--MMYCCQSL 1039



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 38/209 (18%)

Query: 410  LPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLH 469
            +P  F P+ LV L++R +K+E+ WEG                       QSL S      
Sbjct: 882  MPCKFSPEYLVSLDVRGNKLEKLWEG----------------------VQSLGSLE---- 915

Query: 470  FVCPVTINFSYCVNLIEFPQIS--GKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCK 526
                  +N S C NL E P +S    + R YL G  ++  +PS+IE L +L  L+++GC 
Sbjct: 916  -----WMNLSECENLTEIPDLSKATNLKRFYLNGCKSLVTLPSTIENLQNLLGLEMKGCT 970

Query: 527  RLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLP 586
            RL+ + T    L SL  L L GC +L  FP I     ++K +Y D T I E+P   EN  
Sbjct: 971  RLEVLPTDV-NLSSLDILDLSGCSSLRSFPLI---SWNIKWLYLDNTAIVEVPCCIENFS 1026

Query: 587  GLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
             L VL +  C  L N+  NI  L  L  +
Sbjct: 1027 RLTVLMMYCCQSLKNIHPNIFRLTSLMLV 1055


>gi|7635470|emb|CAB88530.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1220

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 244/778 (31%), Positives = 384/778 (49%), Gaps = 106/778 (13%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQ 58
            D V+++GIWG  GIGKTT+A+ +F+Q S  F+ S  + +++G        E +  L+ LQ
Sbjct: 291  DEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQ-LQ 349

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
             QMLS  ++ K       I H    +ER+R  K+ +VLD+V+++GQL  L  E   FG G
Sbjct: 350  NQMLSQMINHK----DIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPG 405

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SRI++TT D  VL K  G    +Y+V     +EAF+ FC  AF +    E  +  +  V 
Sbjct: 406  SRIIITTEDLGVL-KAHGI-NHVYKVEYPSNDEAFQIFCMNAFGQKQPHEGFDEIAWEVT 463

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
                  PL L+VLGS+L  K K  W + L  L    + +I  I   ++ S++ L    K 
Sbjct: 464  CLAGELPLGLKVLGSALRGKSKREWERTLPRLKTSLDGKIGSI---IQFSYDVLCDEDKY 520

Query: 237  IFLDIACFFEGED----KDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
            +FL IAC F GE     K+ +   LD  +   L +L  KSL+S  G  ++MH +L++ GR
Sbjct: 521  LFLYIACLFNGESTTKVKELLGKFLDVKQG--LHLLAQKSLISFDGERIHMHTLLEQFGR 578

Query: 293  QIVRQESEKEP-GKRSRLWDPKEISRVLKHNKGTDAIE--GIFLDLSKIKG-INLDPRAF 348
            +  R++       KR  L   + I  VL  +  TD+    GI L+LS  +  +N+  +  
Sbjct: 579  ETSRKQFVHHGFTKRQLLVGARGICEVLDDDT-TDSRRFIGIHLELSNTEEELNISEKVL 637

Query: 349  TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
              + +    +  +   ++ E+L       QL+         L Y   K+R L+W  Y   
Sbjct: 638  ERVHDFHFVR--IDASFQPERL-------QLAL------QDLIYHSPKIRSLNWYGYESL 682

Query: 409  TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
             LPS F P+ LVEL++R S + + WEG K      ++N K++  LS+     L+  P   
Sbjct: 683  CLPSTFNPEFLVELDMRSSNLRKLWEGTK-----QLRNLKWMD-LSYSS--YLKELP--- 731

Query: 469  HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
                    N S   NL E               S++ E+PSSIE LT L++LDL  C  L
Sbjct: 732  --------NLSTATNLEELK---------LRNCSSLVELPSSIEKLTSLQILDLENCSSL 774

Query: 529  KRIST--SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENL 585
            +++    +  KLR L    L  C +L   P  +    +LK++  S  + + +LPSS  ++
Sbjct: 775  EKLPAIENATKLRELK---LQNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDI 831

Query: 586  PGLEVLFVEDCSKLDNLPDNIGSLEYL-YYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
              LEV  + +CS L  LP +IG+L+ L   I+   S +  LP ++ L + L +L+ + C 
Sbjct: 832  TDLEVFDLSNCSSLVTLPSSIGNLQNLCKLIMRGCSKLEALPININLKS-LDTLNLTDCS 890

Query: 645  GLESFPRTFLLGLSAMGLLHISDYAVREIPQ-----------EIAYLSSL---------- 683
             L+SFP       + +  L +   A++E+P            +I+Y  SL          
Sbjct: 891  QLKSFPEIS----THISELRLKGTAIKEVPLSIMSWSPLADFQISYFESLMEFPHAFDII 946

Query: 684  EILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
              L+LS  + + +P  +K+MS+LR + L + N L SLP+L   L Y++  +CK L+ L
Sbjct: 947  TKLHLS-KDIQEVPPWVKRMSRLRDLSLNNCNNLVSLPQLSDSLDYIYADNCKSLERL 1003


>gi|30692151|ref|NP_190034.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644385|gb|AEE77906.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1194

 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 244/778 (31%), Positives = 384/778 (49%), Gaps = 106/778 (13%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQ 58
            D V+++GIWG  GIGKTT+A+ +F+Q S  F+ S  + +++G        E +  L+ LQ
Sbjct: 291  DEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQ-LQ 349

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
             QMLS  ++ K       I H    +ER+R  K+ +VLD+V+++GQL  L  E   FG G
Sbjct: 350  NQMLSQMINHK----DIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPG 405

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SRI++TT D  VL K  G    +Y+V     +EAF+ FC  AF +    E  +  +  V 
Sbjct: 406  SRIIITTEDLGVL-KAHGI-NHVYKVEYPSNDEAFQIFCMNAFGQKQPHEGFDEIAWEVT 463

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
                  PL L+VLGS+L  K K  W + L  L    + +I  I   ++ S++ L    K 
Sbjct: 464  CLAGELPLGLKVLGSALRGKSKREWERTLPRLKTSLDGKIGSI---IQFSYDVLCDEDKY 520

Query: 237  IFLDIACFFEGED----KDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
            +FL IAC F GE     K+ +   LD  +   L +L  KSL+S  G  ++MH +L++ GR
Sbjct: 521  LFLYIACLFNGESTTKVKELLGKFLDVKQG--LHLLAQKSLISFDGERIHMHTLLEQFGR 578

Query: 293  QIVRQESEKEP-GKRSRLWDPKEISRVLKHNKGTDAIE--GIFLDLSKIKG-INLDPRAF 348
            +  R++       KR  L   + I  VL  +  TD+    GI L+LS  +  +N+  +  
Sbjct: 579  ETSRKQFVHHGFTKRQLLVGARGICEVLDDDT-TDSRRFIGIHLELSNTEEELNISEKVL 637

Query: 349  TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
              + +    +  +   ++ E+L       QL+         L Y   K+R L+W  Y   
Sbjct: 638  ERVHDFHFVR--IDASFQPERL-------QLAL------QDLIYHSPKIRSLNWYGYESL 682

Query: 409  TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
             LPS F P+ LVEL++R S + + WEG K      ++N K++  LS+     L+  P   
Sbjct: 683  CLPSTFNPEFLVELDMRSSNLRKLWEGTK-----QLRNLKWMD-LSYSS--YLKELP--- 731

Query: 469  HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
                    N S   NL E               S++ E+PSSIE LT L++LDL  C  L
Sbjct: 732  --------NLSTATNLEELK---------LRNCSSLVELPSSIEKLTSLQILDLENCSSL 774

Query: 529  KRIST--SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENL 585
            +++    +  KLR L    L  C +L   P  +    +LK++  S  + + +LPSS  ++
Sbjct: 775  EKLPAIENATKLRELK---LQNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDI 831

Query: 586  PGLEVLFVEDCSKLDNLPDNIGSLEYL-YYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
              LEV  + +CS L  LP +IG+L+ L   I+   S +  LP ++ L + L +L+ + C 
Sbjct: 832  TDLEVFDLSNCSSLVTLPSSIGNLQNLCKLIMRGCSKLEALPININLKS-LDTLNLTDCS 890

Query: 645  GLESFPRTFLLGLSAMGLLHISDYAVREIPQ-----------EIAYLSSL---------- 683
             L+SFP       + +  L +   A++E+P            +I+Y  SL          
Sbjct: 891  QLKSFPEIS----THISELRLKGTAIKEVPLSIMSWSPLADFQISYFESLMEFPHAFDII 946

Query: 684  EILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
              L+LS  + + +P  +K+MS+LR + L + N L SLP+L   L Y++  +CK L+ L
Sbjct: 947  TKLHLS-KDIQEVPPWVKRMSRLRDLSLNNCNNLVSLPQLSDSLDYIYADNCKSLERL 1003


>gi|298378158|gb|ADI80539.1| recognition of Peronospora parasitica 1 [Arabidopsis thaliana]
          Length = 1154

 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 244/790 (30%), Positives = 366/790 (46%), Gaps = 130/790 (16%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQ 58
           D V+++GIWG  GIGKTT+A  +FD+FS  F  +  ++D+R        +E    L+ LQ
Sbjct: 284 DEVRMIGIWGPPGIGKTTIAACMFDRFSSRFPFAAIMTDIRECYPRLCLNERNAQLK-LQ 342

Query: 59  KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           +QMLS   ++K  +    I H     ER++  K+ +VLD+V  +GQL  L  E   FG G
Sbjct: 343 EQMLSQIFNQKDTM----ISHLGVAPERLKDKKVFLVLDEVGHLGQLDALAKETRWFGPG 398

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++TT D  VL K  G    +Y+V     +EAF+ FC  AF +   P +  W+    V
Sbjct: 399 SRIIITTEDLGVL-KAHG-INHVYKVKSPSNDEAFQIFCMNAFGQKQ-PCEGFWNLAWEV 455

Query: 177 SYTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           +   G  PL L+VLGS+L    K  W + L    R+  S   +I  I++ SF+ L    K
Sbjct: 456 TCLAGKLPLGLKVLGSALRGMSKPEWERTLP---RLKTSLDGNIGSIIQFSFDALCDEDK 512

Query: 236 SIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGR 292
            +FL IAC F  E    V  +L +   DV   + +L  KSL+S  G  + MH +L + GR
Sbjct: 513 YLFLYIACLFNNESTTKVEEVLANKFLDVGQGIHVLAQKSLISFEGEEIQMHTLLVQFGR 572

Query: 293 QIVRQE-SEKEPGKRSRLWDPKEISRVLKHNK-GTDAIEGIFLDLSKI-KGINLDPRAFT 349
           +  R++       K   L   ++I  VL  +   +    GI LDLSK  +  N+  +A  
Sbjct: 573 ETSRKQFVHHRYTKHQLLVGERDICEVLNDDTIDSRCFIGINLDLSKNEERWNISEKALE 632

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
            M + +  +  +  FY+ ++L S++ ++            L Y   KLR L W  Y    
Sbjct: 633 RMHDFQFVR--IGAFYQRKRL-SLALQD------------LIYHSPKLRSLKWYGYQNIC 677

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY---------------LSALS 454
           LPS F P+ LVEL++  SK+   WEG K        +  Y               L  L 
Sbjct: 678 LPSTFNPEFLVELDMSFSKLWNLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELR 737

Query: 455 FKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI--SGKVTRLYLGQ-SAIEEVPSSI 511
              C SL   PS  +      ++   C +L++ P I  + K+ +L L   S++ E+P SI
Sbjct: 738 LSNCSSLVELPSFGNATKLEKLDLENCRSLVKLPAIENATKLRKLKLEDCSSLIELPLSI 797

Query: 512 ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSD 571
              T+L+ LD+ GC  L R+ +S   + SL    L  C NL                   
Sbjct: 798 GTATNLKKLDMNGCSSLVRLPSSIGDMTSLEGFDLSNCSNL------------------- 838

Query: 572 RTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVAL 631
                ELPSS  NL  L +L +  CSKL+ LP NI  +                      
Sbjct: 839 ----VELPSSIGNLRKLALLLMRGCSKLETLPTNINLIS--------------------- 873

Query: 632 SNMLRSLDSSHCKGLESFPRT-------FLLG-------LSAMGLLHISDYAV------R 671
              LR LD + C  L+SFP         +L+G       LS M    ++D+ +      +
Sbjct: 874 ---LRILDLTDCSRLKSFPEISTHIDSLYLIGTAIKEVPLSIMSWSPLADFQISYFESLK 930

Query: 672 EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
           E P     ++ L++      + + +P  +K+MS+LR + L + N L SLP+LP  L YL+
Sbjct: 931 EFPHAFDIITKLQL----SKDIQEVPPWVKRMSRLRDLRLNNCNNLVSLPQLPDSLAYLY 986

Query: 732 LIDCKMLQSL 741
             +CK L+ L
Sbjct: 987 ADNCKSLERL 996


>gi|240255823|ref|NP_193173.4| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658031|gb|AEE83431.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1008

 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 218/667 (32%), Positives = 321/667 (48%), Gaps = 84/667 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFV-----SDVRGNSETAGGLE 55
           +D  D   IVGI G  GIGKTT+A+A++      F+ SCFV     SD RG  E    L 
Sbjct: 160 LDYKDGAMIVGICGPAGIGKTTIARALYSLLLSSFQLSCFVENLSGSDNRGLDEYGFKL- 218

Query: 56  HLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF 113
            LQ+Q+LS  L++     G  I H    +ER+   K+LIVLDDVN++ QL+ L  E   F
Sbjct: 219 RLQEQLLSKILNQN----GMRIYHLGAIQERLCDQKVLIVLDDVNDLKQLEALANETSWF 274

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSR 173
           G GSRI+VTT DK +LE+      K Y V     EEA E FC +AF+++  P+     ++
Sbjct: 275 GPGSRIIVTTEDKGLLEQH--GINKTYHVGFPSIEEALEIFCIYAFRKSSPPDGFKKLTK 332

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            V +     PL L V+GSSL  K +  W  +   L+R+  S   +I   L++ ++ L   
Sbjct: 333 RVTNVFDNLPLGLRVMGSSLRGKGEDEWEAL---LDRLETSLDRNIEGALRVGYDSLQEE 389

Query: 234 VKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLV--SISGNFLNMHDILQ 288
            +++FL IA FF     + V ++L DS  DV   L IL +KSLV  S SG  + MH +LQ
Sbjct: 390 EQALFLHIAVFFNYNKDEHVIAMLADSNLDVKQGLKILTNKSLVYRSTSGKIV-MHKLLQ 448

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
           ++GR+ ++++   EP KR  L D  EI  VL+++  T A  GI LD S I  + +   AF
Sbjct: 449 QVGRKAIQRQ---EPWKRHILIDAHEICYVLENDTDTRAALGISLDTSGINKVIISEGAF 505

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M NLR    Y  ++              +   +V +P  L++ P  LR L W+ YP  
Sbjct: 506 KRMRNLRFLSVYNTRY--------------VKNDQVDIPEDLEF-PPHLRLLRWEAYPSN 550

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            LP+ F P+ LVEL+++ S++E+ W+G         Q    L  +       L+  P   
Sbjct: 551 ALPTTFHPEYLVELDMKESQLEKLWQG--------TQPLTNLKKMDLTRSSHLKELPDLS 602

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
           +      +  SYC +L+                    E+PSS   L  LE L +  C +L
Sbjct: 603 NATNLERLELSYCKSLV--------------------EIPSSFSELRKLETLVIHNCTKL 642

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
           + + T    L SL    + GC  L+ FP I     H+ R+  D T + ELP+S      L
Sbjct: 643 EVVPT-LINLASLDFFNMHGCFQLKKFPGI---STHISRLVIDDTLVEELPTSIILCTRL 698

Query: 589 EVLFVEDCSKLDNLPDNIGSLEY----LYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
             L +           N  +L Y    L Y+    + I ++P  +   + L  L    C+
Sbjct: 699 RTLMISGSG-------NFKTLTYLPLSLTYLDLRCTGIEKIPDWIKDLHELSFLHIGGCR 751

Query: 645 GLESFPR 651
            L+S P+
Sbjct: 752 NLKSLPQ 758



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 185/435 (42%), Gaps = 74/435 (17%)

Query: 520 LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH----FPEILEKMEHLKRIYSDRTPI 575
           LD  G  ++     +F ++R+L  L +     +++     PE LE   HL+ +  +  P 
Sbjct: 490 LDTSGINKVIISEGAFKRMRNLRFLSVYNTRYVKNDQVDIPEDLEFPPHLRLLRWEAYPS 549

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNM 634
             LP++F     +E+   E  S+L+ L      L  L  + L  +S + +LP     +N+
Sbjct: 550 NALPTTFHPEYLVELDMKE--SQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNL 607

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN-NF 693
            R L+ S+CK L   P +F   L  +  L I +    E+   +  L+SL+   + G    
Sbjct: 608 ER-LELSYCKSLVEIPSSFS-ELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGCFQL 665

Query: 694 ESLPAIIKQMSQLRFIHLEDFNMLQSLP-ELPLC--LKYLHLIDCKMLQSLPVLPFCLES 750
           +  P I   +S+L      D  +++ LP  + LC  L+ L +      ++L  LP  L  
Sbjct: 666 KKFPGISTHISRLVI----DDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPLSLTY 721

Query: 751 LDLTGCNMLRSLPELPLCLQ---YLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEI 807
           LDL  C  +  +P+    L    +L++  C  L+SLP+LPL ++ L   +C  L+S+   
Sbjct: 722 LDLR-CTGIEKIPDWIKDLHELSFLHIGGCRNLKSLPQLPLSIRWLNACDCESLESVA-- 778

Query: 808 LLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRI 867
             C+  L++ V         DL               FTNC KLN +    ++  S  R 
Sbjct: 779 --CVSSLNSFV---------DLN--------------FTNCFKLNQETRRDLIQQSFFR- 812

Query: 868 RHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRN 927
                                    SL +LPG E+P+ F++Q+ G+ + I+    S    
Sbjct: 813 -------------------------SLRILPGREVPETFNHQAKGNVLTIRPESDSQFSA 847

Query: 928 LIGFAFCAVLDSKKV 942
              F  C V+   ++
Sbjct: 848 SSRFKACFVISPTRL 862


>gi|19699367|gb|AAL91293.1| AT5g41750/MUF8_3 [Arabidopsis thaliana]
 gi|24111427|gb|AAN46864.1| At5g41750/MUF8_3 [Arabidopsis thaliana]
          Length = 828

 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 191/589 (32%), Positives = 302/589 (51%), Gaps = 85/589 (14%)

Query: 52  GGLEH-----LQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLK 104
           GG EH     LQKQ+LS  L ++       I H    K+ +   K+LI+LDDV+++ QL+
Sbjct: 10  GGAEHYSKLSLQKQLLSEILKQE----NMKIHHLGTIKQWLHDQKVLIILDDVDDLEQLE 65

Query: 105 RLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHC 164
            L  +   FG GSRI+VTT DK +L+  R ++  IY V+    EEA E  C  AFK++  
Sbjct: 66  VLAEDPSWFGSGSRIIVTTEDKNILKAHRIQD--IYHVDFPSEEEALEILCLSAFKQSSI 123

Query: 165 PEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILK 224
           P+     +  V       PL L V+G+SL  K K+ W ++L   +RI  S   +I +IL+
Sbjct: 124 PDGFEELANKVAELCGNLPLGLCVVGASLRRKSKNEWERLL---SRIESSLDKNIDNILR 180

Query: 225 ISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDVLD---ILIDKSLVSIS--GN 279
           I +++L+   +S+FL IACFF  E  D++ ++L D + DV++   IL D+SLV IS  G+
Sbjct: 181 IGYDRLSTEDQSLFLHIACFFNNEKVDYLTALLADRKLDVVNGFNILADRSLVRISTDGH 240

Query: 280 FLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIK 339
            +  H +LQ++GR+IV ++   EPGKR  L + +EI  VL    GT++++GI  D S I+
Sbjct: 241 VVMHHYLLQKLGRRIVHEQWPNEPGKRQFLIEAEEIRDVLTKGTGTESVKGISFDTSNIE 300

Query: 340 GINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRY 399
            +++   AF  M NL+  + Y   F               S   +Q+P  ++Y+P  +R 
Sbjct: 301 EVSVGKGAFEGMRNLQFLRIYRDSFN--------------SEGTLQIPEDMEYIP-PVRL 345

Query: 400 LHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG------------------------ 435
           LHW  YP ++LP  F P++LV++ +  SK+++ W G                        
Sbjct: 346 LHWQNYPRKSLPQRFNPEHLVKIRMPSSKLKKLWGGIQPLPNLKSIDMSFSYSLKEIPNL 405

Query: 436 EKAC---------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
            KA                +P SI N   L  L+ + C  L+  P+N++      ++ + 
Sbjct: 406 SKATNLEILSLEFCKSLVELPFSILNLHKLEILNVENCSMLKVIPTNINLASLERLDMTG 465

Query: 481 CVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS 540
           C  L  FP IS  + +L LG + IE+VP S+ C + L+ L + G + LKR+    C    
Sbjct: 466 CSELRTFPDISSNIKKLNLGDTMIEDVPPSVGCWSRLDHLYI-GSRSLKRLHVPPC---- 520

Query: 541 LVTLILLGCLNLEHFPEILEKMEHLKRIYSDR----TPITELPSSFENL 585
            +T ++L   N+E  PE +  +  L  +  +       I  LPSS ++L
Sbjct: 521 -ITSLVLWKSNIESIPESIIGLTRLDWLNVNSCRKLKSILGLPSSLQDL 568



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 179/457 (39%), Gaps = 119/457 (26%)

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
           RSLV +   G + + H+  +L+K+   +RI  ++ P         N PG     +E    
Sbjct: 230 RSLVRISTDGHVVMHHY--LLQKLG--RRIVHEQWP---------NEPGKRQFLIEAEEI 276

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSL-------DSSHCKGLESFPR 651
            D L    G+ E +  I    S I ++         +R+L       DS + +G    P 
Sbjct: 277 RDVLTKGTGT-ESVKGISFDTSNIEEVSVGKGAFEGMRNLQFLRIYRDSFNSEGTLQIPE 335

Query: 652 TFLLGLSAMGLLHISDYAVREIPQEI--AYL-------SSLEILYLSGNNFESLPAI--- 699
                +  + LLH  +Y  + +PQ     +L       S L+ L+       +L +I   
Sbjct: 336 DMEY-IPPVRLLHWQNYPRKSLPQRFNPEHLVKIRMPSSKLKKLWGGIQPLPNLKSIDMS 394

Query: 700 -------IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID------CKMLQSLP--VL 744
                  I  +S+   + +      +SL ELP  +  LH ++      C ML+ +P  + 
Sbjct: 395 FSYSLKEIPNLSKATNLEILSLEFCKSLVELPFSILNLHKLEILNVENCSMLKVIPTNIN 454

Query: 745 PFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLP-------------------- 784
              LE LD+TGC+ LR+ P++   ++ LNL D  M+  +P                    
Sbjct: 455 LASLERLDMTGCSELRTFPDISSNIKKLNLGDT-MIEDVPPSVGCWSRLDHLYIGSRSLK 513

Query: 785 --ELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKS---- 838
              +P C+  L +   N ++S+PE ++ L  LD   +    K    L   P SL+     
Sbjct: 514 RLHVPPCITSLVLWKSN-IESIPESIIGLTRLDWLNVNSCRKLKSILG-LPSSLQDLDAN 571

Query: 839 -----AAICF---------EFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAIN 884
                  +CF          F NCL L+ +A   I+  S+ R                  
Sbjct: 572 DCVSLKRVCFSFHNPIRALSFNNCLNLDEEARKGIIQQSVYR------------------ 613

Query: 885 EKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
                     I LPG +IP+ F+++++G SI I L P
Sbjct: 614 ---------YICLPGKKIPEEFTHKATGRSITIPLSP 641


>gi|3860167|gb|AAC72979.1| disease resistance protein RPP1-WsC [Arabidopsis thaliana]
          Length = 1217

 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 244/785 (31%), Positives = 386/785 (49%), Gaps = 87/785 (11%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQ 58
            D V+I+GIWG  GIGKTT+A+ + +Q S  F+ S  + +++G        E +  L+ LQ
Sbjct: 274  DEVRIIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQ-LQ 332

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
             QMLS  ++ K       I H    +ER+R  K+ +VLD+V+++GQL  L  E   FG G
Sbjct: 333  NQMLSQMINHK----DIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPG 388

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SRI++TT D  VL K  G    +Y+V     +EAF+ FC  AF +    E  +  +R V+
Sbjct: 389  SRIIITTEDLGVL-KAHGI-NHVYKVGYPSNDEAFQIFCMNAFGQKQPHEGFDEIAREVM 446

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            +     PL L VLGS+L  K K  W + L    R+  S   +I  I++ S++ L    K 
Sbjct: 447  ALAGELPLGLTVLGSALRGKSKPEWERTLP---RLKTSLDGNIGSIIQFSYDALCDEDKY 503

Query: 237  IFLDIACFFEGED----KDFVASILDDSESDVLDILIDKSLVSIS-----GNFLNMHDIL 287
            +FL IAC F  E     K+ +   LD  +   L +L  KSL+S+S     G  ++MH +L
Sbjct: 504  LFLYIACLFNDESTTKVKELLGKFLDVKQG--LHVLAQKSLISLSYLTFYGERIHMHTLL 561

Query: 288  QEMGRQIVRQESEKEP-GKRSRLWDPKEISRVLKHNKGTDAIE--GIFLDLSKIKG-INL 343
            ++ GR+  R++       KR  L   + I  VL  +  TD+    GI L+LS  +  +N+
Sbjct: 562  EQFGRETSRKQFVHHGFTKRQLLVGARGICEVLDDDT-TDSRRFIGINLELSNTEEELNI 620

Query: 344  DPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLP-NGLDYLPKKLRYLHW 402
              +    + +   F F         ++ +    E+L   ++QL    L Y   K+R L W
Sbjct: 621  SEKVLERVHD---FHFV--------RIDASFQPERLQPERLQLALQDLIYHSPKIRSLKW 669

Query: 403  DTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLR 462
              Y    LPS F P+ L+EL++R SK+++ WEG K      ++N K++S LS+     L+
Sbjct: 670  HRYQNICLPSTFNPEFLIELDMRYSKLQKLWEGTK-----QLRNLKWMS-LSYS--IDLK 721

Query: 463  SFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL----GQSAIEEVPSSIECLTDLE 518
              P+         +  S C +L+E P    K+T L +      S++ E+PS     T LE
Sbjct: 722  ELPNLSTATNLEELKLSNCSSLVELPSSIEKLTSLQILDLQSCSSLVELPS-FGNATKLE 780

Query: 519  VLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITE 577
            +LDL  C  L ++  S     +L  L L  C  L   P  +    +LK++     + + +
Sbjct: 781  ILDLDYCSSLVKLPPSI-NANNLQELSLRNCSRLIELPLSIGTATNLKKLNMKGCSSLVK 839

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLR 636
            LPSS  ++  LEVL + +CS L  LP +IG+L+ L  + +   S +  LP ++ L   L 
Sbjct: 840  LPSSIGDITDLEVLDLSNCSNLVELPSSIGNLQKLIVLTMHGCSKLETLPININL-KALS 898

Query: 637  SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS------- 689
            +L  + C  L+ FP       + +  L ++  A++E+P  I   S L    +S       
Sbjct: 899  TLYLTDCSRLKRFPEIS----TNIKYLWLTGTAIKEVPLSIMSWSRLAEFRISYFESLKE 954

Query: 690  -------------GNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCK 736
                           + + +P  +K+MS+LR + L + N L SLP+L   L Y+H  +CK
Sbjct: 955  FPHAFDIITKLQLSKDIQEVPPWVKRMSRLRVLSLNNCNNLVSLPQLSDSLDYIHADNCK 1014

Query: 737  MLQSL 741
             L+ L
Sbjct: 1015 SLEKL 1019


>gi|297791293|ref|XP_002863531.1| hypothetical protein ARALYDRAFT_494475 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309366|gb|EFH39790.1| hypothetical protein ARALYDRAFT_494475 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1158

 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 219/717 (30%), Positives = 336/717 (46%), Gaps = 91/717 (12%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLE--HLQKQMLST 64
            +++G+ GM GIGKTTL K ++  +  +F     +  +RG S     LE           
Sbjct: 240 TRVIGVVGMPGIGKTTLLKELYKTWKGKFSRYALIDQIRGKSNNFR-LECLPTLLLEKLL 298

Query: 65  TLSEKLEVAGPNIPHFT-KERVRRMKLLIVLDDVNEVGQLKRLIGELD------QFGQGS 117
                L++     P+ T K  +R  K+L+VLDDV+E  Q+  L+G+ D          GS
Sbjct: 299 PELNNLQIDSVEEPYKTHKGLLRERKVLVVLDDVSEREQIYALLGKYDLQNKHEWIKDGS 358

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHC--PE-DLNWHSRS 174
           RIV+ T DK +L   +G     Y V  L   +  + F   AF ++    P+ D    S  
Sbjct: 359 RIVIATNDKSLL---KGLVHDTYVVRQLNHRDGLQLFRYHAFHDDQAIAPKVDFMKLSDE 415

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
            V Y +G+PL L++LG  L  K   HW   L  L    +S    I +++++SF++L+   
Sbjct: 416 FVHYARGHPLALKILGRELYEKNMKHWETKLKIL---AQSPTTYIGEVVQVSFDELSMAQ 472

Query: 235 KSIFLDIACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNFLNMHDILQEMG 291
           K  FLDIACF   +D D+V S+L   D   ++ +  L +K L+      + MHD+L    
Sbjct: 473 KDAFLDIACF-RSQDVDYVESLLVSSDPGSAEAIKALKNKFLIDTCDGRVEMHDLLYTFS 531

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTN 350
           R++  + S +           ++I  V +   G   + GIFLDLS++KG  +LD   F N
Sbjct: 532 RELDLRASTQ----------VQDIINVQQKTMGAADVRGIFLDLSEVKGETSLDREHFKN 581

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M NL   KFY           S   +E  + +K+ +P+GL+   K++R LHW  +PL  L
Sbjct: 582 MRNLWYLKFY----------NSHCPQECKTNNKINMPDGLELPLKEVRCLHWLKFPLEEL 631

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEG---------------EKACVPSSIQNFKYLSALSF 455
           P++F P NLV+L L  S++E+ WEG                K C  S +   + L  L+ 
Sbjct: 632 PNDFDPINLVDLKLTYSEIERLWEGVKDTPVLKWVDLNHSSKLCSLSGLSKAQNLQRLNL 691

Query: 456 KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT 515
           +GC SL S   N++ +   T+  S C N  EFP I   +  LYL  +AI ++P ++  L 
Sbjct: 692 EGCTSLESL-RNVNLMSLKTLTLSNCSNFKEFPLIPENLEALYLDGTAISQLPDNVVNLK 750

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
            L +L+++ CK L+ IST   +L++L  L+L GCL L+ FPEI      LK +  D T I
Sbjct: 751 RLVLLNMKDCKMLETISTCLGELKALQKLVLSGCLKLKEFPEI--NKSSLKFLLLDGTSI 808

Query: 576 TELPS--------------------SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
             +P                         L  L  L ++ C+KL  +P+   +L+YL   
Sbjct: 809 KTMPQLHSVQYLCLSRNDHISYLRVGINQLSQLTRLDLKYCTKLTYVPELPPTLQYL--- 865

Query: 616 LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
              A   S L +       + S   +HC    +F  T    L       I+ YA R+
Sbjct: 866 --DAHGCSSLKNVATPLARIVSTVQNHC----TFNFTNCGNLEQAAKEEITSYAQRK 916



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 213/496 (42%), Gaps = 73/496 (14%)

Query: 574  PITELPSSFE--NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVA 630
            P+ ELP+ F+  NL  L++ +    S+++ L + +     L ++ L  +S +  L S ++
Sbjct: 627  PLEELPNDFDPINLVDLKLTY----SEIERLWEGVKDTPVLKWVDLNHSSKLCSL-SGLS 681

Query: 631  LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
             +  L+ L+   C  LES     L+ L  + L + S++  +E P       +LE LYL G
Sbjct: 682  KAQNLQRLNLEGCTSLESLRNVNLMSLKTLTLSNCSNF--KEFP---LIPENLEALYLDG 736

Query: 691  NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLES 750
                 LP  +  + +L  ++++D  ML+++     CL  L                 L+ 
Sbjct: 737  TAISQLPDNVVNLKRLVLLNMKDCKMLETIS---TCLGELK---------------ALQK 778

Query: 751  LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELP----LCL---------------- 790
            L L+GC  L+  PE+        L D   ++++P+L     LCL                
Sbjct: 779  LVLSGCLKLKEFPEINKSSLKFLLLDGTSIKTMPQLHSVQYLCLSRNDHISYLRVGINQL 838

Query: 791  -QL--LTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTN 847
             QL  L ++ C +L  +PE+   LQ LDA     L   +  L     ++++    F FTN
Sbjct: 839  SQLTRLDLKYCTKLTYVPELPPTLQYLDAHGCSSLKNVATPLARIVSTVQNHCT-FNFTN 897

Query: 848  CLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFS 907
            C  L   A  +I + +  + + +  A  R  Y    NE LS         PG E+P WF 
Sbjct: 898  CGNLEQAAKEEITSYAQRKCQLLPDA--RKHY----NEGLSSEALFSTCFPGCEVPSWFC 951

Query: 908  NQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSE-- 965
            +++ GS +  +L PH     L G A CAV+ S     D    F V+  F ++ +  S   
Sbjct: 952  HEAVGSLLQRKLLPHWHDERLSGIALCAVV-SFLEGQDQISCFSVTCTFKIKAEDNSWVP 1010

Query: 966  -TKHVDLGYNSRYIEDLIDSDRVILGFKPCLNV------GFPDGYHHTIATFKFFAERKF 1018
             T  V +       +D I+SD V + +  C N          D  + T A+ +F      
Sbjct: 1011 FTCPVGIWTREGDEKDKIESDHVFIAYISCPNTIRRLEDQNSDKCNFTEASLEFTVTSGI 1070

Query: 1019 --YKIKRCGLCPVYAN 1032
              +K+ +CGL  VY N
Sbjct: 1071 GVFKVLKCGLSLVYEN 1086


>gi|297805932|ref|XP_002870850.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316686|gb|EFH47109.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1053

 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 219/675 (32%), Positives = 345/675 (51%), Gaps = 84/675 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG--------NSETAGGLE 55
           SD V+++GIWG  GIGKTT+A+ ++ QFS  FE S F+ +++         + E +  ++
Sbjct: 254 SDEVRMIGIWGPSGIGKTTIARVLYSQFSENFELSIFMENIKELMYTRPVCSDEYSAKIQ 313

Query: 56  HLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF 113
            LQ+Q LS  ++ K       +PH    ++R+   ++LIVLD +++  QL  +  E   F
Sbjct: 314 -LQQQFLSQIINHK----DMELPHLGVAQDRLNDKRVLIVLDSIDQSIQLDAIAKETRWF 368

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP---EDLNW 170
           G GSRI++TT+D+R+L K  G    IY+V      EA++ FC +AF +N      E+L W
Sbjct: 369 GHGSRIIITTQDQRLL-KAHGI-NHIYKVEFPSAYEAYQIFCMYAFGQNFPKDGFEELAW 426

Query: 171 HSRSVVSYTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNK 229
                V+   GN PL L V+GS      +  W   L  L    ++ I  I   LK S++ 
Sbjct: 427 Q----VTKLLGNLPLGLRVMGSHFRGMSRHEWVNALPRLKIRLDASIQSI---LKFSYDA 479

Query: 230 LTPRVKSIFLDIACFF--EGEDKDFVA-SILDDSESDVLDILIDKSLVSI---SGNF--L 281
           L    K +FL IAC F  +G  KD++A S LD  +   L +L +KSL+++   S ++  +
Sbjct: 480 LCDEDKDLFLHIACLFNNDGMVKDYLALSFLDVRQG--LHLLAEKSLIALEIFSADYTHI 537

Query: 282 NMHDILQEMGRQIVRQESEKE----PGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK 337
            MH++L ++GR IVR +   +    PGKR  L D ++I  VL  N G+  + GI  ++  
Sbjct: 538 KMHNLLVQLGRDIVRHKPGHQSICAPGKRQFLVDARDICEVLTDNTGSRNVIGILFEVYT 597

Query: 338 IKG-INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKK 396
           + G +N+  RAF  MSNL+  +F+ P   + +KL               LP GL+ LP+K
Sbjct: 598 LSGELNISERAFEGMSNLKFLRFHGPYDGQSDKL--------------YLPQGLNNLPRK 643

Query: 397 LRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFK 456
           LR L W  +P++ LPSNF  K LV+L +  SK++  W+G +    S +     L  +   
Sbjct: 644 LRILEWSHFPMKCLPSNFCTKYLVQLCMGYSKLQNLWQGNQVSKRSDLPVLGNLKRMDLW 703

Query: 457 GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTD 516
             + L+  P           + S   NL        K+T    G S++ E+PSS+  L  
Sbjct: 704 ESKHLKELP-----------DLSTATNL-------EKLT--LFGCSSLAELPSSLGNLQK 743

Query: 517 LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPIT 576
           L +L+LRGC +L+ + T+   L SL  L L  CL ++ FPEI   ++ L   Y   T I 
Sbjct: 744 LRMLNLRGCSKLEALPTNI-NLESLDDLDLADCLLIKSFPEISTNIKDLMLTY---TAIK 799

Query: 577 ELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
           E+PS+ ++   L  L +     L   P  +  +  LY+     + I ++P  V   + L+
Sbjct: 800 EVPSTIKSWSHLRNLEMSYNDNLKEFPHALDIITKLYF---NDTEIQEIPLWVKKISRLQ 856

Query: 637 SLDSSHCKGLESFPR 651
           +L    CK L + P+
Sbjct: 857 TLVLEGCKRLVTIPQ 871



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 140/361 (38%), Gaps = 80/361 (22%)

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
           L  L+ + + +   L  LPD   +       L   S++++LPSS+     LR L+   C 
Sbjct: 694 LGNLKRMDLWESKHLKELPDLSTATNLEKLTLFGCSSLAELPSSLGNLQKLRMLNLRGCS 753

Query: 645 GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
            LE+ P T +   S   L       ++  P EI+  ++++ L L+    + +P+ IK  S
Sbjct: 754 KLEALP-TNINLESLDDLDLADCLLIKSFP-EIS--TNIKDLMLTYTAIKEVPSTIKSWS 809

Query: 705 QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE 764
            LR + +   + L+  P     +  L+  D ++ +    +P  ++ +             
Sbjct: 810 HLRNLEMSYNDNLKEFPHALDIITKLYFNDTEIQE----IPLWVKKISR----------- 854

Query: 765 LPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSK 824
               LQ L LE C  L ++P+L   L  +T  NC            L+ LD S       
Sbjct: 855 ----LQTLVLEGCKRLVTIPQLSDSLSNVTAINCQ----------SLERLDFS----FHN 896

Query: 825 HSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAIN 884
           H   L W             F NC KLN +A   I                         
Sbjct: 897 HPKILLW-------------FINCFKLNNEAREFI------------------------- 918

Query: 885 EKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDS 944
               +   +   LPG E+P  F+ +++GSSI + L         + F  C +LD KKVD+
Sbjct: 919 ----QTSCTFAFLPGREVPANFTYRANGSSIMVNLNQRRPLSTTLRFKACVLLD-KKVDN 973

Query: 945 D 945
           D
Sbjct: 974 D 974



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 137/344 (39%), Gaps = 92/344 (26%)

Query: 423 NLRCSKVEQPWEGE--KACVPSSIQNF-KYLSALSFKGCQSLRSFPSNL--HFVCPVTIN 477
           NL+  +   P++G+  K  +P  + N  + L  L +     ++  PSN    ++  + + 
Sbjct: 614 NLKFLRFHGPYDGQSDKLYLPQGLNNLPRKLRILEWSHF-PMKCLPSNFCTKYLVQLCMG 672

Query: 478 FSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
           +S   NL +  Q+S +               S +  L +L+ +DL   K LK +      
Sbjct: 673 YSKLQNLWQGNQVSKR---------------SDLPVLGNLKRMDLWESKHLKELP-DLST 716

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS 597
             +L  L L GC                       + + ELPSS  NL  L +L +  CS
Sbjct: 717 ATNLEKLTLFGC-----------------------SSLAELPSSLGNLQKLRMLNLRGCS 753

Query: 598 KLDNLPDNIGSLEYLYY--------------------ILAAASAISQLPSSVALSNMLRS 637
           KL+ LP NI                            ++   +AI ++PS++   + LR+
Sbjct: 754 KLEALPTNINLESLDDLDLADCLLIKSFPEISTNIKDLMLTYTAIKEVPSTIKSWSHLRN 813

Query: 638 LDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLP 697
           L+ S+   L+ FP      L  +  L+ +D  ++EIP                       
Sbjct: 814 LEMSYNDNLKEFPH----ALDIITKLYFNDTEIQEIP----------------------- 846

Query: 698 AIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
             +K++S+L+ + LE    L ++P+L   L  +  I+C+ L+ L
Sbjct: 847 LWVKKISRLQTLVLEGCKRLVTIPQLSDSLSNVTAINCQSLERL 890


>gi|357499359|ref|XP_003619968.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494983|gb|AES76186.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1401

 Score =  263 bits (672), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 231/751 (30%), Positives = 357/751 (47%), Gaps = 140/751 (18%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           +S++ V +VGI+G GG+GK+TLAKAI++  + +FE  CF+  VR NS T   L+HLQ+++
Sbjct: 196 ESNEGVHMVGIYGTGGLGKSTLAKAIYNYVADQFECVCFLHKVRENS-THNNLKHLQEEL 254

Query: 62  LSTT--LSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           L  T  L+ KL      IP   KER+ R K+L++LDDV+++ QL+ L G LD FG+GSR+
Sbjct: 255 LLKTIKLNIKLGDVSEGIP-LIKERLHRKKILLILDDVDKMEQLEALAGGLDWFGRGSRV 313

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TTRDK +L   R +  + Y V G+  +EAFE     AFK+   P          VSY 
Sbjct: 314 IITTRDKHLLTCHRVD--RTYEVEGIYGKEAFELLRWLAFKDK-VPLGYEEILNRAVSYA 370

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            G PLV+E++GS+L  K    W   L    +I  ++I +I   LK+S++ L    +S+FL
Sbjct: 371 SGLPLVIEIVGSNLFGKSIETWKSTLDGYEKIPNTKIQEI---LKVSYDALEEEEQSVFL 427

Query: 240 DIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISGNF--------LNMHDIL 287
           DIAC F+G    E +D + +         + +L++KSL+ I+  +        + +HD++
Sbjct: 428 DIACCFKGCKWTEVEDILHAHYGHCIKHHVGVLVEKSLLKINTQYRSARNHVDVTLHDLV 487

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPR 346
           ++MG++IVRQES KEPG+RSRLW   +I  VL+ N GT  IE I+L+   ++  I+ + +
Sbjct: 488 EDMGKEIVRQESSKEPGERSRLWCHDDIVHVLQKNTGTSNIEMIYLNCPAMEPVIDCNGK 547

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           +F  M+ L+                     E   +SK     G  YLP  LR   W    
Sbjct: 548 SFKKMTKLKTLII-----------------ENGHFSK-----GPKYLPNSLRVFKWKG-- 583

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS 466
                              C+                 + F ++  L+F  C+ L   P 
Sbjct: 584 -------------------CTSE-------SLSSSIFSKKFDFMKVLTFDNCEYLTHVP- 616

Query: 467 NLHFVCPVTINFSYCVNLIEFP-QISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
                     N S  +NL +F  + S  +  ++           SI  L  LE+L+ + C
Sbjct: 617 ----------NVSGLLNLEKFSVEKSNNLITIH----------DSIGKLNKLEILNAKKC 656

Query: 526 KRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFEN 584
            +L+  S    +L SL    L  C +L+ FPE+L KM +LK I   + T I  LP SFEN
Sbjct: 657 IKLE--SFPPLQLPSLKEFELSYCRSLKKFPELLCKMTNLKEIALHNNTSIGGLPFSFEN 714

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
           L  L  + +     L   P +I  +                   +  SN           
Sbjct: 715 LSELRHVTIYRSGML-RFPKHIDKM-----------------YPIVFSN----------- 745

Query: 645 GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
            +ES              L+ S+ +   +P  + +  +++ L LS NNF+ LP  +K+  
Sbjct: 746 -VESLS------------LYESNLSFECLPMLLKWFVNVKHLDLSKNNFKILPECLKECH 792

Query: 705 QLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
            LR + L     L+ +  +P  LK L  I C
Sbjct: 793 LLRILELNHCKSLEEIRGIPPNLKDLSAIKC 823



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 90/399 (22%), Positives = 164/399 (41%), Gaps = 78/399 (19%)

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
           ++VL  ++C  L ++P+  G L    + +  ++ +  +  S+   N L  L++  C  LE
Sbjct: 601 MKVLTFDNCEYLTHVPNVSGLLNLEKFSVEKSNNLITIHDSIGKLNKLEILNAKKCIKLE 660

Query: 648 SFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN-NFESLPAIIKQMSQL 706
           SFP   L  L    L +    ++++ P+ +  +++L+ + L  N +   LP   + +S+L
Sbjct: 661 SFPPLQLPSLKEFELSYCR--SLKKFPELLCKMTNLKEIALHNNTSIGGLPFSFENLSEL 718

Query: 707 RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPV---------LPFCL------ESL 751
           R + +    ML+     P  +  ++ I    ++SL +         LP  L      + L
Sbjct: 719 RHVTIYRSGMLR----FPKHIDKMYPIVFSNVESLSLYESNLSFECLPMLLKWFVNVKHL 774

Query: 752 DLTGCNMLRSLPE-LPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEIL 808
           DL+  N  + LPE L  C  L+ L L  C  L  +  +P  L+ L+   C+ L S    +
Sbjct: 775 DLSK-NNFKILPECLKECHLLRILELNHCKSLEEIRGIPPNLKDLSAIKCHSLSSSSRRM 833

Query: 809 LCLQELDASV------LEKLSKH---------SPDLQWAPESLKSAAIC-FEFTNCLKLN 852
           L  Q+L  +        E+  +H         + DL W   +L+S  +  F +   +   
Sbjct: 834 LLSQQLIQTKPARDKRREREKEHKIFVYPVRSNDDLVWGRAALRSTIMNEFLYKEIMSFK 893

Query: 853 GKANNKILADS--------------LLRIR-----------HMAIASLRLGYEMAINEKL 887
            +++N IL  S              L ++            H     L  G +  ++ + 
Sbjct: 894 NQSSNLILPKSQPLPVTKRLNPNSVLFKVNQNNPNPRVVRDHRGAMRLHRGTKFPVSAQE 953

Query: 888 S--ELRGSL-------IVLPGSE--IPDWFSNQSSGSSI 915
           S    RG L        + P     IPDWF +QS G ++
Sbjct: 954 SCFNHRGKLYEAGCTEFLFPNGREGIPDWFEHQSRGHTL 992


>gi|351721740|ref|NP_001235684.1| disease resistance protein [Glycine max]
 gi|223452623|gb|ACM89638.1| disease resistance protein [Glycine max]
          Length = 451

 Score =  263 bits (671), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 168/429 (39%), Positives = 253/429 (58%), Gaps = 39/429 (9%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S D   ++GI G GGIGKTTLAKA++D    +F+G+ F+ +V   S     L+HLQ+++L
Sbjct: 21  SRDITCLLGIHGTGGIGKTTLAKALYDSIYKQFDGTSFL-NVGETSNPKTDLKHLQEKLL 79

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRM---KLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           S  L +  ++   NI   T +  RR+   ++LIVLD+V+++ QL  L G+   FG GSRI
Sbjct: 80  SEILEDD-KIHWRNIEEGTAKIERRLGFKRVLIVLDNVDDIKQLNNLAGKCAWFGPGSRI 138

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH--SRSVVS 177
           ++TTRDK +L+   GE +K Y V  L+ +E+ E FC++AF+++ CPE  N+   S   +S
Sbjct: 139 IITTRDKHLLD--LGEVEKRYEVKMLDEKESLELFCHYAFRKS-CPES-NYKDLSNRAMS 194

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
             KG PL LEVLGS L  K    W   L   +R  +S   ++  +L+IS++ L    KSI
Sbjct: 195 CCKGLPLALEVLGSHLFKKNVDVWKDAL---DRYEKSPHGNVQKVLRISYDSLFRHEKSI 251

Query: 238 FLDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FLD+ACFF+G+  D+V ++LD S+    D +  L++KSL+++  + L MHD++Q+MGR+I
Sbjct: 252 FLDVACFFKGQRLDYVKTVLDASDFSSGDGITTLVNKSLLTVDYDCLWMHDLIQDMGREI 311

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V++++  + G+RSRLW  +++ +VL+ + G+  IEGI LD    K IN     F  M NL
Sbjct: 312 VKEKAYNKIGERSRLWHHEDVLQVLEDDNGSSEIEGIMLDPPHRKEINCIDTVFEKMKNL 371

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           R+          I +  S S E +             YLPK LR L W  YP ++LPS F
Sbjct: 372 RIL---------IVRNTSFSHEPR-------------YLPKNLRLLDWKNYPSKSLPSEF 409

Query: 415 KPKNLVELN 423
            P  +   N
Sbjct: 410 NPTKISAFN 418


>gi|357468447|ref|XP_003604508.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505563|gb|AES86705.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 806

 Score =  263 bits (671), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 202/557 (36%), Positives = 283/557 (50%), Gaps = 75/557 (13%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+ IF Q   +++G CF+  V    +T GG+  L++ +LS  L E ++    +I  
Sbjct: 104 KTTIAEEIFSQNRSDYDGCCFLEKVSERLKTPGGVGCLKESLLSELLKESVKELSGDI-- 161

Query: 80  FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKI 139
             K R+ RMK+LIVLDDV E  QL+ L G LD F   SRI++T+RDK+VL     E+  I
Sbjct: 162 --KRRISRMKVLIVLDDVKETDQLEMLFGTLDWFQSDSRIILTSRDKQVLRNNEVEDDDI 219

Query: 140 YRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKS 199
           Y V  L+  EA   F + AFK++H   +    S+SVV+Y KG PLVL+VL   L  K+K 
Sbjct: 220 YEVGVLDSSEALVLFNSNAFKQSHLEMEYYELSKSVVNYAKGIPLVLKVLAHMLRGKKKE 279

Query: 200 HWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGED--KDFVASIL 257
            W   L  L R+    +  +YD +++S++ L    +  FLDIACFF G D   D++  +L
Sbjct: 280 VWESQLDKLRRL---PVQKVYDAMRLSYDDLDRLEQKYFLDIACFFNGLDLKVDYMKHLL 336

Query: 258 DDSESD-----VLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
            D +SD      L+ L DK+L++IS  N ++MHDILQEMG +IVRQES  + GKRSRLW+
Sbjct: 337 KDCDSDNYVAGGLETLKDKALITISEDNVISMHDILQEMGWEIVRQESS-DLGKRSRLWN 395

Query: 312 PKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
           P EI  VLK++KGT+AI  I                                      LP
Sbjct: 396 PDEIYDVLKNDKGTNAIRSI-------------------------------------SLP 418

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
           +M           +L   L   P  ++YLHW   PL++ P  F  KNLV L+L  S VE+
Sbjct: 419 TMR----------ELKLRLQSFPLGIKYLHWTYCPLKSFPEKFSAKNLVILDLSDSLVEK 468

Query: 432 PWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEF-PQI 490
            W G        +Q+   L  +       L+  P     +    +N S C  L    P I
Sbjct: 469 LWCG--------VQDLINLKEVRLSYSMLLKELPDFSKAINLKVLNISSCYQLKSVHPSI 520

Query: 491 --SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG 548
               ++ +L L    I  +PSS  C   LE+L LR    ++ I +S   L  L  L + G
Sbjct: 521 LSLNRLEQLGLSWCPINALPSSFGCQRKLEILVLRYSD-IEIIPSSIKNLTRLRKLDIRG 579

Query: 549 CLNLEHFPEILEKMEHL 565
           CL L   PE+   +E L
Sbjct: 580 CLKLVALPELPSSVETL 596



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 139/337 (41%), Gaps = 74/337 (21%)

Query: 632 SNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN 691
           +N +RS+     + L+   ++F LG+     LH +   ++  P++ +   +L IL LS +
Sbjct: 409 TNAIRSISLPTMRELKLRLQSFPLGIK---YLHWTYCPLKSFPEKFSA-KNLVILDLSDS 464

Query: 692 NFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL--PLCLKYLHLIDCKMLQSL--PVLPFC 747
             E L   ++ +  L+ + L    +L+ LP+    + LK L++  C  L+S+   +L   
Sbjct: 465 LVEKLWCGVQDLINLKEVRLSYSMLLKELPDFSKAINLKVLNISSCYQLKSVHPSILSLN 524

Query: 748 -LESLDLTGCNMLRSLPELPLC--------------------------LQYLNLEDCNML 780
            LE L L+ C  + +LP    C                          L+ L++  C  L
Sbjct: 525 RLEQLGLSWCP-INALPSSFGCQRKLEILVLRYSDIEIIPSSIKNLTRLRKLDIRGCLKL 583

Query: 781 RSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAA 840
            +LPELP  ++ L V++   L+++           ++V E+  ++   +           
Sbjct: 584 VALPELPSSVETLLVKDSFSLKTVL--------FPSTVAEQFKENKKSV----------- 624

Query: 841 ICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGS 900
              EF NC  L+  +    L +  L ++   +     G + A           + V PGS
Sbjct: 625 ---EFWNCENLDESS----LINVGLNVQINLMKYANFGSDEA-----------MYVYPGS 666

Query: 901 EIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
            IP+W   +++   + I L        L+GF FC V 
Sbjct: 667 SIPEWLEYKTTKDDMIIDL-SQPRLSPLLGFVFCIVF 702


>gi|359493574|ref|XP_002271071.2| PREDICTED: TMV resistance protein N [Vitis vinifera]
          Length = 813

 Score =  263 bits (671), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 157/361 (43%), Positives = 225/361 (62%), Gaps = 12/361 (3%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ V++VG++G+GGIGKTT+  A+++Q SH+FE    +++VR  S    GL  LQ+++L 
Sbjct: 214 SNDVRMVGVYGLGGIGKTTIINALYNQISHQFESVSLLTNVRKESTKNSGLLKLQQKLLD 273

Query: 64  TTLSEKLEVAGPNIPHFTK---ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            TL  K ++   N+    K   +++   K+L+ LDDV+E+ QL+ LIG+ + FG GSRI+
Sbjct: 274 DTLRTKGQIVLKNVYEGIKIIRDKLSSKKVLVFLDDVDELTQLEHLIGKHNWFGPGSRII 333

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTR K +L   R E   IY V  L F EA + FC +AFK++H  E     S  VV Y  
Sbjct: 334 ITTRKKDLLT--RHEVNDIYEVKKLNFHEALQLFCRYAFKQHHLKEGYADLSHQVVRYAD 391

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL L+VLGS L  KR  +W   L  L ++   EI    ++LKISF+ L    + IFLD
Sbjct: 392 GLPLALKVLGSLLFGKRLPNWKSELRKLEKVPNMEI---VNVLKISFDGLDYTQRMIFLD 448

Query: 241 IACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGN-FLNMHDILQEMGRQIVR 296
           IACFF+G D + V+ ILD SE +    ++ L+D+  ++IS +  + MHD+L +MG+ IV 
Sbjct: 449 IACFFKGGDVEIVSRILDGSEFNAESGINALVDRCFITISKDKTIEMHDLLAQMGKGIVD 508

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
           +E   EPG+RSRLW   +I RVLK N GT+ IEGIFLD+ K + I    +AF  M+ LRL
Sbjct: 509 EECPNEPGERSRLWRHTDIYRVLKRNTGTEKIEGIFLDVDKSEQIQFTCKAFERMNRLRL 568

Query: 357 F 357
            
Sbjct: 569 L 569


>gi|357513695|ref|XP_003627136.1| Disease resistance protein [Medicago truncatula]
 gi|355521158|gb|AET01612.1| Disease resistance protein [Medicago truncatula]
          Length = 991

 Score =  262 bits (670), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 265/953 (27%), Positives = 416/953 (43%), Gaps = 225/953 (23%)

Query: 6   TVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTT 65
           +VQI+GIWGMGG+GKTT+AK +F +   +++  CF          A   E+   ++ S  
Sbjct: 61  SVQILGIWGMGGMGKTTIAKVLFAKHFAQYDQVCF----------ANAKEYSVSKLFSEL 110

Query: 66  LSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
           L E+   +   I  F   R+R  K+LIVLD+V+ + Q + L  +  +  + SR+++TTRD
Sbjct: 111 LKEEFSPSDVVISTFHMRRLRSTKVLIVLDNVDSLDQFEYLCRDYGKLHKDSRLIITTRD 170

Query: 126 KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
           +++L   R    +IY V   E  ++ E FC  AF  +H  E      +  V+Y  G PL 
Sbjct: 171 RQLL---RKRVHRIYEVKQWEDPKSLELFCLEAFVPSHPREKYEHLLQRAVTYAGGVPLA 227

Query: 186 LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF 245
           L+V    L  +    W      L +   + +H++   LK+S++ L    K IFLDIA FF
Sbjct: 228 LKVFALLLRSREIEFWESAFKKLGKHSNATVHEV---LKLSYDDLDALQKKIFLDIAFFF 284

Query: 246 EGEDKDFVASILD----DSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQESE 300
            GE KD VA ILD    ++ S+++ +L D +L++IS +  + MHD+LQ+MG  I      
Sbjct: 285 IGEKKDCVARILDACDFEASSEIV-VLKDMALITISNDHTIQMHDLLQKMGSDICNDRG- 342

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
            +P   +RL   +E   V++ NKG+  IEGI LDLS+   ++L    F+ M  LR+ KFY
Sbjct: 343 TDPATHTRL-SGREALDVIEENKGSSFIEGIMLDLSQNNDLSLSADTFSKMKGLRILKFY 401

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
            P            + +  + + + LP  L+    KLRY  W+ YP  +LP  FK K LV
Sbjct: 402 AP------------SNQSCTTTYLDLPEFLEPFSNKLRYFEWNGYPFESLPKPFKAKFLV 449

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
           E+ +R S V++ W+G        IQ F  L                         I+ S 
Sbjct: 450 EIRMRYSIVKELWQG--------IQEFDKLEG-----------------------IDMSE 478

Query: 481 CVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS 540
           C + ++ P +S K +R                    L+ ++L GC+ L  +  S     +
Sbjct: 479 CKHFVQLPDLS-KASR--------------------LKWINLSGCESLVDLHPSVLCANT 517

Query: 541 LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
           LVTLIL  C                 ++ S R          ++L  LE + V+ C+ L+
Sbjct: 518 LVTLILDRC----------------TKVRSVRGE--------KHLSFLEEISVDGCTSLE 553

Query: 601 NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAM 660
                            ++  I  L  S   S  +++LD S    +   P+   L L ++
Sbjct: 554 EFA-------------VSSDLIENLDLS---STGIQTLDLS----IGCLPKIKRLNLESL 593

Query: 661 GLLHISDYAVREIPQEIAYLSSLEILYLSGNNF----ESLPAIIKQMSQLRFIHLEDFNM 716
            L H        +P+E+  + SL  L +SG+      + L  +   +  LR +H++DF  
Sbjct: 594 RLSH--------LPKELPSVISLRELKISGSRLIVEKQQLHELFDGLRSLRILHMKDFVF 645

Query: 717 LQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLED 776
           +    +LP               ++ V+   +E L+L G NM R             LE 
Sbjct: 646 VNQF-DLP--------------NNIDVVSKLME-LNLDGSNMKR-------------LE- 675

Query: 777 CNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESL 836
              L  +PELP  + +L   NC  L S+      L+ L   ++ K +KH           
Sbjct: 676 ---LECIPELPPLITVLNAVNCTSLISVSS----LKNLATKMMGK-TKH----------- 716

Query: 837 KSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIV 896
                   F+N L L+G +   I+             SL L    A+ + +S  R  + V
Sbjct: 717 ------ISFSNSLNLDGHSLTLIM------------KSLNLTMMSAVFQNVSVRRLRVAV 758

Query: 897 L-----------PGSEIPDWFSNQ-SSGSSICIQLPPHSSCRNLIGFAFCAVL 937
                       PG+ IP     Q ++ SSI   L P  S  NL+GF +  VL
Sbjct: 759 HSYNYTSVDTCEPGTCIPSLLQCQIATDSSITFNLLPDHS--NLLGFIYSVVL 809


>gi|357446429|ref|XP_003593492.1| Disease resistance-like protein GS4-5 [Medicago truncatula]
 gi|355482540|gb|AES63743.1| Disease resistance-like protein GS4-5 [Medicago truncatula]
          Length = 895

 Score =  262 bits (670), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 232/752 (30%), Positives = 349/752 (46%), Gaps = 124/752 (16%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S+  V+++GI+G+GG+GKTTLA+A+++  +++FE  CF+ +VR NS    GLEHLQK  L
Sbjct: 220 SNYEVKMIGIYGLGGMGKTTLARAVYNFIANQFECVCFLHNVRENS-AKHGLEHLQKDFL 278

Query: 63  STT--LSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           S T  L  KL  +   IP   K+R+ R K+L+VLDDVNE+ Q++ L G LD F  GSR++
Sbjct: 279 SKTVGLDIKLGDSSEGIP-IIKQRLHRKKVLLVLDDVNELKQVQVLAGGLDWFSVGSRVI 337

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK +L     E    Y ++ L  EEA E     AFK               V+Y  
Sbjct: 338 ITTRDKHLLSSHGIE--LTYEIDELNKEEALELLTWKAFKSKQVNSSYEHVLNRAVNYAS 395

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL LEVLGS+L  K    W  +L    RI   EI     ILK+SF+ L    +S+FLD
Sbjct: 396 GLPLALEVLGSNLFGKNIKEWNSLLDRYERIPNKEIQ---KILKVSFDALEEDEQSVFLD 452

Query: 241 IACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSI-SGNF-LNMHDILQEMGRQI 294
           IAC F+G +   +  +L D     +     +L+ K+L+ I   N+ + MHD++++MG++I
Sbjct: 453 IACCFKGYNLKQMEDMLSDHYGQCMKYHIGVLVKKTLLRICRWNYSVTMHDLIEDMGKEI 512

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHN----------------------KGTDAIEGIF 332
           VRQES +EPGKRSRLW  ++I + ++ N                        T+   G F
Sbjct: 513 VRQESVREPGKRSRLWFHEDIFQAIEENSVRQYTYFFLFMFNLDLALLNISATNDHVGDF 572

Query: 333 LDLSKIKGINLDPRAFTNMSNLRLFKFYVPKF---YEIEKLPSMSTEEQLSYSKVQLPNG 389
           L    +K   +  +  T+   +    F +P+    ++ ++   M   + L          
Sbjct: 573 LPFYDMKISYM--KCGTSQIEIIHLDFPLPQAIVEWKGDEFKKMKNLKTLIVKTSSFSKP 630

Query: 390 LDYLPKKLRYLHWDTYPLRTLPSNFKPKN----------LVELNLRCSKVEQPWEGEKAC 439
           L +LP  L+ L W  + L+ +PS+F P N          L    L  S  E+ + G K  
Sbjct: 631 LVHLPNSLKVLEW--HGLKDIPSDFLPNNLSICKLPNSSLTSFKLANSLKERMFLGMKVL 688

Query: 440 VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
                     +S +S    Q+L  F            +F +C NL+              
Sbjct: 689 HLDKCYRLTEISDVS--SLQNLEEF------------SFRWCRNLL-------------- 720

Query: 500 GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
                  +  S+ CL  L++L   GC  LK       +L SL  L L  C  L+ FPEIL
Sbjct: 721 ------TIHDSVGCLKKLKILKAEGCSNLKSFPP--IQLTSLELLELSYCYRLKKFPEIL 772

Query: 560 EKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAA 619
            KME++  I  + T I ELP SF+NL G++                       Y IL   
Sbjct: 773 VKMENIVGIDLEETSIDELPDSFQNLIGIQ-----------------------YLILDGH 809

Query: 620 SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
               + P S  +  M +  D          P + L     + +L   +     +P  + +
Sbjct: 810 GIFLRFPCSTLM--MPKQSDK---------PSSMLSSNVQVIVLTNCNLTDESLPIVLRW 858

Query: 680 LSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
            +++  L+LS NNF  LP  I++   LR ++L
Sbjct: 859 FTNVTYLHLSKNNFTILPECIEEHGSLRILNL 890


>gi|357519065|ref|XP_003629821.1| Resistance protein [Medicago truncatula]
 gi|355523843|gb|AET04297.1| Resistance protein [Medicago truncatula]
          Length = 780

 Score =  262 bits (670), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 227/732 (31%), Positives = 348/732 (47%), Gaps = 125/732 (17%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S+D V ++GI G+GGIGKTTL  A+++  +  FEG CF+ +VR NS+  G L+HLQK 
Sbjct: 12  VGSNDEVSMIGIHGIGGIGKTTLDLAVYNLIADSFEGLCFLENVRENSDKHG-LQHLQKI 70

Query: 61  MLSTTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +LS TL EK ++   N+       K R+++ K+L++LDDV+++ QL+ L+G  D  G GS
Sbjct: 71  LLSETLGEK-KIKLTNVKQGISVIKHRLQQKKVLLILDDVDKIEQLEALVGGFDWLGSGS 129

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           R+++TTRDK +LE                      H  N  ++            +  V+
Sbjct: 130 RVIITTRDKHLLES---------------------HGVNITYE-----------LQRAVA 157

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y  G PL L V+GS+L  K    W   LH    I      DI  ILK+SF+ L    +S+
Sbjct: 158 YASGLPLALIVIGSNLFGKTVQEWESALHRYETIPNK---DIQKILKVSFDALEEDEQSV 214

Query: 238 FLDIACFFEGED------KDFVASILDDSESDVLDILIDKSLVSISGNF-LNMHDILQEM 290
           FLDIACF+ G +      ++ + +  D      + +L++KSL+ IS +  L +H ++++M
Sbjct: 215 FLDIACFYGGTNDKLADVENMLHAHYDACMKYHIGVLVEKSLIKISSHSKLTLHALIEDM 274

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
           G++IVR ES +EPGKRSRLW  ++I +VL+ N GT AI+ I+L       + LD   F  
Sbjct: 275 GKEIVRLESPEEPGKRSRLWSHEDIIQVLEENTGTSAIKTIYLMCE--DEVELDEMVFKK 332

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M  L+                       L+        G  +LP  LR + W  YP   L
Sbjct: 333 MKTLK----------------------TLTIKGGHFSKGPKHLPNSLRAVEWWRYPSEYL 370

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
           P +F PK    + L            K+C+ +S++    L  L+F     L   P     
Sbjct: 371 PYDFHPKKPAIIKL-----------PKSCL-TSLKLTDLLKILNFDDADCLTEIPDVSSL 418

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
           +   T +F YC  LI                     +  S+  L  L+VL  +GC +L+R
Sbjct: 419 LNLETFSFEYCEKLI--------------------TIHESVGFLDKLKVLSAKGCSKLRR 458

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
                 KL+SL  L L  C +L++FP+IL K E++  +  + TPI E P SF++L  L+ 
Sbjct: 459 FPP--IKLKSLEQLNLSFCKSLKNFPQILWKKENITELGLEETPIKEFPCSFQSLTRLQT 516

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           L +  C     LP+NI  +  L  I A  S    LP                 K  E   
Sbjct: 517 LQLHYCGTF-RLPNNIFMMPNLVNITAWKSQGWILP-----------------KQDEGEQ 558

Query: 651 RTFLLGLSAMGLLHISDYAVRE--IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
           R   +  S +  LH+    + +   P  + +  +++ L L+ NNF  LP  I++   L  
Sbjct: 559 RDISIVSSNVERLHLIFCILSDDFFPSGLTWFRNVKELSLAHNNFTILPECIQECHFLTD 618

Query: 709 IHLEDFNMLQSL 720
           ++L+    LQ +
Sbjct: 619 LNLDYCQYLQEV 630



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 188/450 (41%), Gaps = 107/450 (23%)

Query: 569 YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAA-SAISQLPS 627
           + D   +TE+P    +L  LE    E C KL  + +++G L+ L  + A   S + + P 
Sbjct: 403 FDDADCLTEIPD-VSSLLNLETFSFEYCEKLITIHESVGFLDKLKVLSAKGCSKLRRFPP 461

Query: 628 SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP---QEIAYLSSLE 684
            + L + L  L+ S CK L++FP+  L     +  L + +  ++E P   Q +  L +L+
Sbjct: 462 -IKLKS-LEQLNLSFCKSLKNFPQ-ILWKKENITELGLEETPIKEFPCSFQSLTRLQTLQ 518

Query: 685 ILYLSG----NNFESLPAIIK---QMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM 737
           + Y       NN   +P ++      SQ   +  +D    + +  +   ++ LHLI    
Sbjct: 519 LHYCGTFRLPNNIFMMPNLVNITAWKSQGWILPKQDEGEQRDISIVSSNVERLHLI---- 574

Query: 738 LQSLPVLPFCLESLDL--TGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQ---L 792
                   FC+ S D   +G    R++ EL L      +           LP C+Q    
Sbjct: 575 --------FCILSDDFFPSGLTWFRNVKELSLAHNNFTI-----------LPECIQECHF 615

Query: 793 LTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLN 852
           LT  N +  Q L       QE+   V        P+L+     + SA+ C  +T C+   
Sbjct: 616 LTDLNLDYCQYL-------QEVRGIV--------PNLE-----IFSASHCRSWT-CI--- 651

Query: 853 GKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSG 912
                                      +M +N++L   R ++  LPG+ I +WF ++SSG
Sbjct: 652 ---------------------------DMLLNQELHGNRNTMFYLPGARILNWFEHRSSG 684

Query: 913 SSICIQLPPHSSCRNLI-GFAFCAVLDSKKVD-SDCFRYFY---VSFQFDLEIKTL-SET 966
            SI +        RN     A C  + S+ +D +  + YFY   V F+ +L+ + + +E 
Sbjct: 685 QSISLWF------RNKFPAIALCFAICSQFLDGTGSYIYFYLHKVKFKANLDEELVENEW 738

Query: 967 KHVDLGYNSRYIED-LIDSDRVILGFKPCL 995
            HV++ YN +     LIDS   +   K C+
Sbjct: 739 NHVEITYNGKDKNSILIDSGIHVFKQKSCM 768


>gi|224111080|ref|XP_002332990.1| predicted protein [Populus trichocarpa]
 gi|222834667|gb|EEE73130.1| predicted protein [Populus trichocarpa]
          Length = 881

 Score =  262 bits (670), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 248/796 (31%), Positives = 371/796 (46%), Gaps = 129/796 (16%)

Query: 223 LKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLN 282
           L++ +++L    K IFLDIACFF    KDF+   LD  E   +D L D  L+ I  + + 
Sbjct: 23  LEMCYHELNQTEKKIFLDIACFFGRCKKDFLQQTLDLEERSGIDRLADMCLIKIVQDKIK 82

Query: 283 MHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGIN 342
           MHD+L ++G++IV QE+  +P +RSRLW+  +I+           +E I L     K + 
Sbjct: 83  MHDVLLKLGKKIVLQEN-VDPRERSRLWEADDIN-----------LESISLIFDATKELT 130

Query: 343 LDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHW 402
           L P AF  M NLRL K Y P F    K PS           + LP GL +L  +LR+L+W
Sbjct: 131 LSPTAFEGMYNLRLLKIYYPPFL---KDPSKEKIMNGKRVGIHLPRGLHFLSSELRFLYW 187

Query: 403 DTYPLRTLPSNFKPKNLVELNLRCSKVEQPW-EG--------------EKACVPSSIQNF 447
             Y L++ PS F P+ LV+L + CS++EQ   EG                A +  SI   
Sbjct: 188 YNYALKSFPSIFFPEKLVQLEMPCSQLEQLRNEGMLKSLKSLNLHGCSGLASLTHSIGML 247

Query: 448 KYLSALSFKGCQSLRSFPSNLHFVCPV-TINFSYCVNLIEFPQISG---KVTRLYLGQ-S 502
           K L      GC  L S P+N+  +  + +++ S C  L+  P   G    + +L L   S
Sbjct: 248 KSLDQFDLNGCSRLASLPNNIDALKSLKSLHLSGCSGLVSLPNSIGVLKSLDQLDLSDCS 307

Query: 503 AIEEVPSSIECLTD-------LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
            +  +P  +  L D       +++L L GC  L  +  +  +L+SL +L L GC +LE  
Sbjct: 308 RLASLPDRLASLLDKIGEFKSMKLLKLHGCSGLASLLDNIGELKSLTSLNLSGCSSLESL 367

Query: 556 PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV---LFVEDCSKLDNLPDNIGSLEYL 612
           P+ +  ++ L ++  D +    L S  E++ GL+    L +  CS L ++PDNI  L+ L
Sbjct: 368 PDSIGMLKSLYQL--DLSGCLRLESLLESIGGLKCLAKLHLTGCSGLASVPDNIDRLKSL 425

Query: 613 YYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF---LLGLSAMGLLHISD- 667
             + L+  S ++ LP S+     L  L  S C GL S P +    +  L ++  LH+S  
Sbjct: 426 AKLHLSGCSGLASLPDSIDRLKCLDMLHLSGCLGLASLPDSIDDNIGALKSLKWLHLSGC 485

Query: 668 YAVREIPQEIAYLSSLEILYLSG--------NN--------------FESLPAIIKQMSQ 705
             +  +P  I  L SL+ L L+G        NN               ESLP  I  +  
Sbjct: 486 SGLASLPDRIGELKSLKSLNLNGCSGLASLPNNIGALKSLKLLHLSGLESLPDNIGGLRC 545

Query: 706 LRFIHLEDFNMLQSLPELPLCLKY---LHLIDCKMLQSLPVLPFCLE---SLDLT-GCNM 758
           L  ++L     L SLP+    LK    LHLI C  L+SLP     L+   +LDL+     
Sbjct: 546 LTMLNLSGCFKLASLPDSIGALKLLCTLHLIGCSGLKSLPESIGELKRLTTLDLSERLGS 605

Query: 759 LRSLPELPLC----------------LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQ 802
           L SL +L L                 L  L L+DC  L+ LPELP  LQ+L    C  L+
Sbjct: 606 LVSLTQLRLSQIDFERIPASIKQLTKLSKLYLDDCKQLQCLPELPSTLQVLIASGCISLK 665

Query: 803 SLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILAD 862
           S+  I +                           K+ +  F F+ CL+L+  ++ +I+  
Sbjct: 666 SVASIFM---------------------QGDREYKAVSQEFNFSECLQLDQNSHFRIMGA 704

Query: 863 SLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQS-SGSSICIQLPP 921
           + LRIR MA +   L Y+      L E+R   + +PGSE+ + FS ++  GSS+ I+ P 
Sbjct: 705 AHLRIRRMATS---LFYQEYAGNPLKEVR---LCIPGSEVLERFSYKNREGSSVKIRQPA 758

Query: 922 HSSCRNLIGFAFCAVL 937
           H       GF  CAV+
Sbjct: 759 HWH----RGFTLCAVV 770


>gi|297825395|ref|XP_002880580.1| hypothetical protein ARALYDRAFT_320248 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326419|gb|EFH56839.1| hypothetical protein ARALYDRAFT_320248 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1067

 Score =  262 bits (670), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 212/706 (30%), Positives = 331/706 (46%), Gaps = 106/706 (15%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           D +DT QI+G+ GM GIGKTTLA  + +++  +F       D+  NSE    ++ L++ +
Sbjct: 197 DGNDT-QIIGVVGMPGIGKTTLAMMLHEKWKRKFISCVTYLDISKNSEDDRPVQ-LRRTL 254

Query: 62  LSTTLSEKLEVAGPNIPHFT-KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           L   L  K+   G    H + K  + + K+  +LDDV++  QL+ L+GELD   +GS+I+
Sbjct: 255 LEDLLKGKVPDIGDETTHGSVKVALLKTKIFAILDDVSDKRQLEFLLGELDWIKKGSKII 314

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFE----HFCNFAFKENHCPEDLNWHSRSVV 176
           +TT DK +LE F  +   + ++N     + F     H  NF F  +     L   SR  V
Sbjct: 315 ITTCDKSLLEGFADDTYVVPKLNDRVALQLFSYHAFHGQNFNFTSS-----LLTLSRMFV 369

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            Y +G+PL L++LG  L  K + HW  +L                        LT +   
Sbjct: 370 DYARGHPLTLKLLGRELYEKDEVHWAPILE----------------------MLTKQSNR 407

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDVLDI------LIDKSLVSISGNFLNMHDILQEM 290
           +F    CFF+ ED+ FV S+LD  + D  +       L++K L++I+G  + M+  L   
Sbjct: 408 MFQ--VCFFKSEDEYFVRSLLDSGDPDSTNAVSEVKDLVNKFLITIAGGRVEMNVPLYTF 465

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDA--IEGIFLDLSKI-KGINLDPRA 347
            + +          +  RLW+ ++I   L   K +DA  + GIFLD SK+ K + LD   
Sbjct: 466 SKDL-------GSPRWLRLWNYEDIINKLMKMKKSDANIVRGIFLDTSKLTKSMCLDILT 518

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F +M NLR  K Y           S    +  +  K+  P+GL++   ++RYLHW  +PL
Sbjct: 519 FIDMRNLRYMKIY----------DSCCPRQCNAECKLNFPDGLEFPLGEVRYLHWVKFPL 568

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEGEK------------------------------ 437
             LP +F+P+NLV+L L  SK+ + WEGEK                              
Sbjct: 569 EELPPDFRPENLVDLRLPYSKITRVWEGEKDTPRLKWVDLSHSSELLDLSALSKAENLQR 628

Query: 438 ----ACV-----PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP 488
                C      P  IQN K L  L+ +GC  L S P  ++ +   T+  S C NL EF 
Sbjct: 629 LNLEGCTSLDEFPLEIQNMKSLVFLNLRGCIRLCSLPE-VNLISLKTLILSDCSNLEEFQ 687

Query: 489 QISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG 548
            IS  V  L+L  +AI+ +P +I+ L  L VL+L+ CK L  +      L++L  LIL G
Sbjct: 688 LISESVEFLHLDGTAIKGLPQAIQKLQRLVVLNLKNCKMLACLPNCLGNLKALDKLILSG 747

Query: 549 CLNLEHFPEILEKMEHLKRIYSDRTPITELPS----SFENLPGLEVLFVEDCSKLDNLPD 604
           C  L++ P++   ++HL  +  D T   E+PS    +    P    +F++    +   P 
Sbjct: 748 CSRLKNLPDVRNSLKHLHTLLFDGTGAKEMPSISCFTGSEGPASADMFLQTLGSMTEWPC 807

Query: 605 NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
            +  +  L ++  + +    L   +     L+ LD  HC  L S P
Sbjct: 808 AVNRVSSLRHLCLSGNDFVSLQPDIGKLYNLKWLDVKHCTKLRSVP 853



 Score =  103 bits (256), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 173/381 (45%), Gaps = 43/381 (11%)

Query: 580 SSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSL 638
           S+      L+ L +E C+ LD  P  I +++ L ++ L     +  LP    +S  L++L
Sbjct: 618 SALSKAENLQRLNLEGCTSLDEFPLEIQNMKSLVFLNLRGCIRLCSLPEVNLIS--LKTL 675

Query: 639 DSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLP 697
             S C  LE F     L   ++  LH+   A++ +PQ I  L  L +L L        LP
Sbjct: 676 ILSDCSNLEEFQ----LISESVEFLHLDGTAIKGLPQAIQKLQRLVVLNLKNCKMLACLP 731

Query: 698 AIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH--LIDCKMLQSLPVLPFCLESLDLTG 755
             +  +  L  + L   + L++LP++   LK+LH  L D    + +P +     S     
Sbjct: 732 NCLGNLKALDKLILSGCSRLKNLPDVRNSLKHLHTLLFDGTGAKEMPSISCFTGSEGPAS 791

Query: 756 CNM----LRSLPELPLC------LQYLNLEDCNMLRSLPELP--LCLQLLTVRNCNRLQS 803
            +M    L S+ E P        L++L L   + +   P++     L+ L V++C +L+S
Sbjct: 792 ADMFLQTLGSMTEWPCAVNRVSSLRHLCLSGNDFVSLQPDIGKLYNLKWLDVKHCTKLRS 851

Query: 804 LPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADS 863
           +P +   LQ  DA   + L + +  + ++  S +  A  F FTNC KL+  A + I++ +
Sbjct: 852 VPMLPPKLQYFDAHGCDSLKRVADPIAFSVLSDQIHAT-FSFTNCNKLDQDAKDSIISYT 910

Query: 864 LLRIRHMAIASLRLGYEMAINEKLSELRGSLI-------VLPGSEIPDWFSNQSSGSSIC 916
           L R                + ++L++  G L+         PG E+P WFS+Q+SGS + 
Sbjct: 911 LRR-------------SQLVRDELTQYNGGLVSEALIGTCFPGWEVPAWFSHQASGSVLK 957

Query: 917 IQLPPHSSCRNLIGFAFCAVL 937
            +LP H       G   CAV+
Sbjct: 958 PKLPAHWCDNKFTGIGLCAVI 978


>gi|121544146|gb|ABM55687.1| TIR-NBS-LRR class disease resistance protein [(Populus tomentosa x
           P. bolleana) x P. tomentosa]
          Length = 678

 Score =  262 bits (669), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 171/459 (37%), Positives = 255/459 (55%), Gaps = 45/459 (9%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           ++D V I GI GM GIGKTT+AK +F+Q  + FEGSCF+S++   S+   GL  LQKQ+L
Sbjct: 245 ATDDVCIAGIHGMPGIGKTTIAKVVFNQLYYRFEGSCFLSNINETSKQFNGLALLQKQLL 304

Query: 63  STTLSEKLEVAGPNIPH----FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
              L  K +VA  N         KER+RR ++L+V DDV    QL  L+GE    G+GSR
Sbjct: 305 HDIL--KQDVANINCVDRGKVLIKERIRRKRVLVVADDVAHPEQLNALMGERSWLGRGSR 362

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRD  VL K      + Y++  L+  E+ + F   A ++    ED    S+  V Y
Sbjct: 363 VIITTRDSSVLLK----ADQTYQIEELKPYESLQLFRWHALRDTKPTEDYMELSKDAVDY 418

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSI 237
             G PL LEV+G+ L  K +  W  V+  L RI     HDI   L+ SF+ L    +++ 
Sbjct: 419 CGGLPLALEVMGACLSGKNRDGWKCVIEKLRRIPH---HDIQGKLRTSFDALDGEELRNA 475

Query: 238 FLDIACFFEGEDKDFVASILD-----DSESDVLDILIDKSLVSISG-NFLNMHDILQEMG 291
           FLDIACFF    K++VA +L      + E D L+ L ++SL+ ++    + MHD+ ++MG
Sbjct: 476 FLDIACFFIDRKKEYVAKVLGARCGYNPEVD-LETLRERSLIKVNCFGKITMHDLFRDMG 534

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R++VR+ S KEPGKR+R+W+ ++   VL+  KGTD +EG+ LD+   +  +L  R+F  M
Sbjct: 535 REVVRESSPKEPGKRTRIWNQEDAWNVLQQQKGTDVVEGLTLDVRASEAKSLSARSFAKM 594

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
             L L                      L  + V L      L K+L ++ W   PL+ LP
Sbjct: 595 KCLNL----------------------LQINGVHLTGSFKLLSKELMWICWLQCPLKYLP 632

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYL 450
           S+F   NLV L+ + S +++ W+GEK  V + +Q+ K+L
Sbjct: 633 SDFILDNLVVLDTQYSNLKELWKGEK--VRNILQSPKFL 669


>gi|298953299|gb|ADI99934.1| TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus]
          Length = 1178

 Score =  262 bits (669), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 251/824 (30%), Positives = 376/824 (45%), Gaps = 178/824 (21%)

Query: 4   SDT-VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           SDT V +VG++G+GGIGKTTLAKA++++ + +FE  CF+S+VR  S+   GL  LQ+ +L
Sbjct: 254 SDTGVYMVGLYGIGGIGKTTLAKALYNKIASQFEACCFLSNVREASKQFNGLAQLQETLL 313

Query: 63  STTLSEKLEVA----GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
              L+  L+V     G NI    + R+   K+LIVLDDV+++ QL+ L+G  D FGQGSR
Sbjct: 314 YEILTVDLKVINLDRGINI---IRNRLCLKKVLIVLDDVDKLEQLEALVGGRDWFGQGSR 370

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I+VTTR+K +L     +E  +  + GL+ +EA E F   AFK+NH   +    S+   SY
Sbjct: 371 IIVTTRNKHLLSSHGFDE--MENILGLDEDEAIELFSWHAFKKNHPSSNYLDLSKRATSY 428

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
            KG+ L L VLGS LC + +  W  +L               D  + S NK         
Sbjct: 429 CKGHSLALVVLGSFLCTRDQVEWCSIL---------------DEFENSLNK--------- 464

Query: 239 LDIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
                                   D+ DIL            L+   +  +MG +IV  E
Sbjct: 465 ------------------------DIKDILQ-----------LSFDGLEDKMGHKIVCGE 489

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
           S  E GKRSRLW  +++  VL +N GTDA++GI LD      +++DP+AF  M NLRL  
Sbjct: 490 S-LELGKRSRLWLVQDVWEVLVNNSGTDAVKGIKLDFPNSTRLDVDPQAFRKMKNLRL-- 546

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
                               L     +    ++YLP  L+++ W  +   T PS F  KN
Sbjct: 547 --------------------LIVQNARFSTKIEYLPDSLKWIKWHGFRQPTFPSFFTMKN 586

Query: 419 LVELNLRCSKVEQPWEGEKAC--------------------------------------- 439
           LV L+L+ S ++   +  + C                                       
Sbjct: 587 LVGLDLQHSFIKTFGKRLEDCERLKYVDLSYSTFLEKIPNFSAASNLEELYLTNCTNLGM 646

Query: 440 VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV-TINFSYCVNLIEFPQIS--GKVTR 496
           +  S+ +   L+ L+  GC +L+  P     +  +  +N SYC  L + P +S    +T 
Sbjct: 647 IDKSVFSLDKLTVLNLDGCSNLKKLPRGYFMLSSLKKLNLSYCKKLEKIPDLSSASNLTS 706

Query: 497 LYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
           L++ + + +  +  S+  L  LE L L+ C  L ++ +    L+SL+ L L GC  LE F
Sbjct: 707 LHIYECTNLRVIHESVGSLDKLEGLYLKQCTNLVKLPSYL-SLKSLLCLSLSGCCKLESF 765

Query: 556 PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
           P I + M+ L+ +  D T I ELPSS   L  L  L +  C+ L +LP+ I  L  L  +
Sbjct: 766 PTIAKNMKSLRTLDLDFTAIKELPSSIRYLTELWTLKLNGCTNLISLPNTIYLLRSLENL 825

Query: 616 LAAASAI-SQLPS------------SVALSNMLRSLDSSH-CKGLESFPRTFLLGLSAMG 661
           L +  +I    P             S  +   L SL   H     ESF    LL L +  
Sbjct: 826 LLSGCSIFGMFPDKWNPTIQPVCSPSKMMETALWSLKVPHFLVPNESFSHFTLLDLQS-- 883

Query: 662 LLHISDYAVREIPQEIA-YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSL 720
             +IS+    +I  ++A +LS L    LS N F SLP+ + +                  
Sbjct: 884 -CNISNANFLDILCDVAPFLSDLR---LSENKFSSLPSCLHKF----------------- 922

Query: 721 PELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE 764
               + L  L L +CK LQ +P LP  ++ +D  GC  L  +P+
Sbjct: 923 ----MSLWNLELRNCKFLQEIPSLPESIQKMDACGCESLSRIPD 962


>gi|357490889|ref|XP_003615732.1| Resistance protein [Medicago truncatula]
 gi|355517067|gb|AES98690.1| Resistance protein [Medicago truncatula]
          Length = 1177

 Score =  262 bits (669), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 193/613 (31%), Positives = 305/613 (49%), Gaps = 76/613 (12%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSE--TAGGLEHLQK 59
           ++S  V ++GIWGMGG+GKTT AKAI++Q   +F    F+ ++R   E  + GG  H+  
Sbjct: 203 NNSTKVCMIGIWGMGGLGKTTAAKAIYNQIHRKFVYRSFIENIRETCERDSKGGW-HICL 261

Query: 60  QMLSTTLSEKLEVAGPNIPHFT---KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           Q    +   K +    NI   T   K+ +   K+LIVLDDV +V Q+K L      FG G
Sbjct: 262 QQQLLSDLLKTKEKIHNIASGTIAIKKMLSAKKVLIVLDDVTKVEQVKALYESRKWFGAG 321

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           S ++VT+RD  +L+  + +   +Y VN ++ +E+ E F   AF++     D +  S SV+
Sbjct: 322 SVLIVTSRDAHILKSLQVDH--VYPVNEMDQKESLELFSWHAFRQASPRADFSELSSSVI 379

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP-RVK 235
            Y  G PL  EV+GS L  + +  W  VL  L  I +   H + + L+IS++ L+  + K
Sbjct: 380 KYCGGLPLAAEVIGSYLYGRTREEWTSVLSKLEIIPD---HHVQEKLRISYDGLSDGKQK 436

Query: 236 SIFLDIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSI-SGNFLNMHDILQEMG 291
            IFLDI CFF G+D+ +V  IL+      S  + +LI++SL+ +   N L MHD++++MG
Sbjct: 437 DIFLDICCFFIGKDRAYVTEILNGCGLFASIGISVLIERSLLKVEKNNKLGMHDLIRDMG 496

Query: 292 RQIVRQESEKE--------PGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINL 343
           R+IVRQ SEK+        PG+RSRLW  K++  VL +N GT  +EG+ L+L      + 
Sbjct: 497 REIVRQNSEKDVRQISEKDPGERSRLWFQKDVHDVLTNNTGTKTVEGLVLNLETTSRASF 556

Query: 344 DPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWD 403
           +  AF  M  LRL +                         V L     +L K+LR+++W 
Sbjct: 557 NTSAFQEMKKLRLLQLDC----------------------VDLTGDFGFLSKQLRWVNWR 594

Query: 404 TYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRS 463
                 +P+NF   NLV   L+ S V+Q W+               L  L+    + L++
Sbjct: 595 QSTFNHVPNNFYQGNLVVFELKYSMVKQVWK--------ETPFLDKLKILNLSHSKYLKN 646

Query: 464 FPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLR 523
            P           NFS        P +   + +      ++ EV  SI  L +L +++ +
Sbjct: 647 TP-----------NFSL------LPSLEKLIMK---DCPSLSEVHPSIGDLNNLLLINFK 686

Query: 524 GCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE 583
            C  L  +     +L S+ TLIL GC N+    E + +M+ LK + + RT I + P  F 
Sbjct: 687 DCTSLGNLPREISQLMSVTTLILDGCSNITELEEDVVQMKSLKTLMAARTGIEKAP--FS 744

Query: 584 NLPGLEVLFVEDC 596
            +    ++++  C
Sbjct: 745 IVSSKSIVYISLC 757


>gi|357474625|ref|XP_003607597.1| NBS resistance protein [Medicago truncatula]
 gi|355508652|gb|AES89794.1| NBS resistance protein [Medicago truncatula]
          Length = 1278

 Score =  261 bits (668), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 238/731 (32%), Positives = 348/731 (47%), Gaps = 124/731 (16%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS D V++VGI GMGGIGKTTL  A++ Q SH+F+  CF+ D+       G +   QKQ
Sbjct: 213 LDSVDDVRVVGICGMGGIGKTTLTTALYGQISHQFDARCFIDDLSKIYRHDGQVG-AQKQ 271

Query: 61  MLSTTLS-EKLEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +L  T   E  ++    +     + R+RR++ LI+LD+V++V QL +L    +  G GSR
Sbjct: 272 ILHQTFGKEHFQICNLFDTDDLIRRRLRRLRALIILDNVDKVEQLDKLALNREYLGAGSR 331

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I++ +RD+ +L ++  +E  +Y+V  L    + + FC  AFK  H     +  +   +SY
Sbjct: 332 IIIISRDEHILNEYGVDE--VYKVPLLNETNSLQLFCQKAFKLEHVMSGYDKMALDTLSY 389

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL ++VLGS L  +  S W      L R+ E  I DI D+L++SF  L    K IF
Sbjct: 390 ANGLPLAIKVLGSFLFGRDISEWRS---KLARLRECPIKDIMDVLRLSFEGLENMEKDIF 446

Query: 239 LDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQI 294
           LDIACFF+G +K+ V +IL+     +D+ L ILIDKSL+SIS G  + MH +L E+GR+I
Sbjct: 447 LDIACFFKGYNKECVTNILNCRGFHADIGLRILIDKSLISISYGTNITMHSLLVELGRKI 506

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V++ S K+  K SRLW  +  + V+  N   +    +     +IK   L     ++MS+L
Sbjct: 507 VQENSTKDLRKWSRLWSLEHFNNVMLENMEKNVEAVVICHPRQIK--TLVAETLSSMSHL 564

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL  F                        V +   L+YL  +LRY  W  YP   LP +F
Sbjct: 565 RLLIF---------------------DRGVYISGSLNYLSNELRYFKWTCYPFMCLPKSF 603

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
           +P  LVEL L  S ++Q WEG+           KYL  L                     
Sbjct: 604 QPNQLVELYLWRSSIQQLWEGK-----------KYLPNLK-------------------- 632

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
           T++  Y  +LI+ P                 EVP       +LE L+L GC  L +I  S
Sbjct: 633 TMDLMYSKHLIKMPNFG--------------EVP-------NLERLNLDGCVNLVQIDPS 671

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
              LR LV L L  C NL                         +P++   L  L+ L + 
Sbjct: 672 IGLLRKLVFLNLKNCKNL-----------------------ISIPNNIFGLTSLKYLNLS 708

Query: 595 DCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
            CSK+     ++  L+    +L + S  S L       N  + L S     L SF   + 
Sbjct: 709 WCSKVFTNTRHLNKLDSSEIVLHSQSTTSSL-----YHNADKGLVSRLLSSLLSFSFLWE 763

Query: 655 LGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDF 714
           L +S  GL  + D A+  IP        L  L L GNNF +LP+  +++S L ++ L+  
Sbjct: 764 LDISFCGLSQMPD-AIGCIPW-------LGRLILMGNNFVTLPS-FRELSNLVYLDLQHC 814

Query: 715 NMLQSLPELPL 725
             L+ LPELPL
Sbjct: 815 KQLKFLPELPL 825



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 157/379 (41%), Gaps = 62/379 (16%)

Query: 564 HLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAI 622
            L  +Y  R+ I +L    + LP L+ + +     L  +P N G +  L  + L     +
Sbjct: 607 QLVELYLWRSSIQQLWEGKKYLPNLKTMDLMYSKHLIKMP-NFGEVPNLERLNLDGCVNL 665

Query: 623 SQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLS 681
            Q+  S+ L   L  L+  +CK L S P   + GL+++  L++S  + V    + +  L 
Sbjct: 666 VQIDPSIGLLRKLVFLNLKNCKNLISIPNN-IFGLTSLKYLNLSWCSKVFTNTRHLNKLD 724

Query: 682 SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           S EI+  S    +S  + +   +    +     ++L       L + +  L   +M  ++
Sbjct: 725 SSEIVLHS----QSTTSSLYHNADKGLVSRLLSSLLSFSFLWELDISFCGL--SQMPDAI 778

Query: 742 PVLPFCLESLDLTGCNM--LRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCN 799
             +P+ L  L L G N   L S  EL   L YL+L+ C  L+ LPELPL           
Sbjct: 779 GCIPW-LGRLILMGNNFVTLPSFRELS-NLVYLDLQHCKQLKFLPELPLP---------- 826

Query: 800 RLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKI 859
              S P ++                     +W     K     F   NC +L  K  ++ 
Sbjct: 827 --HSSPSVI---------------------KWDEYWKKWGLYIF---NCPELGEK--DQY 858

Query: 860 LADSLLRIRHMAIASLRLGYEMAINEKLSELRGSL-IVLPGSEIPDWFSNQSSGSSICIQ 918
            + +LL +         + +  A  E L+  RG++ IV+PGSEIP W +NQ  G S  I 
Sbjct: 859 SSMTLLWL---------IQFVQANQESLACFRGTIGIVIPGSEIPSWLNNQCVGKSTRID 909

Query: 919 LPPHSSCRNLIGFAFCAVL 937
           L P     N IG A C V 
Sbjct: 910 LSPTLHDSNFIGLACCVVF 928


>gi|186479099|ref|NP_001117396.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332193249|gb|AEE31370.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1161

 Score =  261 bits (667), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 225/761 (29%), Positives = 350/761 (45%), Gaps = 125/761 (16%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAGG 53
           S  V++VGI G  GIGKTT+A+A+F + S  F+GS F+               N +    
Sbjct: 201 SKEVRMVGISGSSGIGKTTIARALFKRLSRHFQGSTFIDRAFVSYSRNIYSGANPDDPNM 260

Query: 54  LEHLQKQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQ 112
              LQ   LS  L +K +++  P      +ER++  K+LI++DD++++  L  L+G+   
Sbjct: 261 KLQLQGHFLSEILGKKDIKIDDPAA---LEERLKHQKVLIIIDDLDDIMVLDTLVGQTQW 317

Query: 113 FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
           FG GSRI+V T DK  L     +   IY V+      A +  C  AFK+N+ P+      
Sbjct: 318 FGYGSRIIVVTNDKHFLIAHGIDH--IYEVSFPTDVHACQMLCQSAFKQNYAPKGFEDLV 375

Query: 173 RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
             VV +    PL L +LG  L  +   +W  +L  L      +   I  IL+IS++ L  
Sbjct: 376 VDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDMLPRLENSLRID-GKIEKILRISYDGLES 434

Query: 233 RVKSIFLDIACFFEGEDKDFVASILDDSE-SDVLDILIDKSLVSISGNFLNMHDILQEMG 291
             + IF  IAC F   +   + S+L DS+ S  L+ L DKSL+ +   ++ MH  LQEMG
Sbjct: 435 EDQEIFRHIACLFNHMEVTTIKSLLADSDVSFALENLADKSLIHVRQGYVVMHRSLQEMG 494

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IVR +S  +PG+R  L DP +I  +L    GT  + GI LD+  I+ +++  RAF  M
Sbjct: 495 RKIVRIQSIDKPGEREFLVDPNDIHDILNACTGTQKVLGISLDIRNIRELDVHERAFKGM 554

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
           SNLR        F EI+          L    + LP   DYLP+ L+ L W  +P+R +P
Sbjct: 555 SNLR--------FLEIKNF-------GLKEDGLHLPPSFDYLPRTLKLLCWSKFPMRCMP 599

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGE----------------------------------K 437
             F+P+NLV+L ++ SK+ + WEG                                   K
Sbjct: 600 FGFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLEILNLK 659

Query: 438 AC-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
            C     +PSSI+N   L  L    C+SL+  P+  +      +N  +C  L  FP+ S 
Sbjct: 660 FCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNLKSLDRLNLYHCSKLKTFPKFST 719

Query: 493 KVTRLYLGQSAIEEVPSS--IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
            ++ L L  + IE+ PS+  +E L +  +      ++            +++    L  L
Sbjct: 720 NISVLNLNLTNIEDFPSNLHLENLVEFRISKEESDEKQWEEEKPLTPFLAMMLSPTLTSL 779

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGS 608
           +LE+ P ++                 EL SSF+NL  L+ L + +C  L+ LP   N+ S
Sbjct: 780 HLENLPSLV-----------------ELTSSFQNLNQLKDLIIINCINLETLPTGINLQS 822

Query: 609 LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY 668
           L+YL +                          S C  L SFP       + + +L++ + 
Sbjct: 823 LDYLCF--------------------------SGCSQLRSFPEIS----TNISVLYLDET 852

Query: 669 AVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
           A+ E+P  I   S+L    LS N+   L  +   MS+L+ +
Sbjct: 853 AIEEVPWWIEKFSNLT--ELSMNSCSRLKCVFLHMSKLKHL 891



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 82/190 (43%), Gaps = 35/190 (18%)

Query: 407 LRTLPSNFKPKNLVELNLRCSKVE---QPWEGEKACVP---------------------- 441
           +   PSN   +NLVE   R SK E   + WE EK   P                      
Sbjct: 731 IEDFPSNLHLENLVEF--RISKEESDEKQWEEEKPLTPFLAMMLSPTLTSLHLENLPSLV 788

Query: 442 ---SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLY 498
              SS QN   L  L    C +L + P+ ++      + FS C  L  FP+IS  ++ LY
Sbjct: 789 ELTSSFQNLNQLKDLIIINCINLETLPTGINLQSLDYLCFSGCSQLRSFPEISTNISVLY 848

Query: 499 LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC-----LNLE 553
           L ++AIEEVP  IE  ++L  L +  C RLK +     KL+ L   +   C     + L 
Sbjct: 849 LDETAIEEVPWWIEKFSNLTELSMNSCSRLKCVFLHMSKLKHLKEALFRNCGTLTRVELS 908

Query: 554 HFPEILEKME 563
            +P  +E M+
Sbjct: 909 GYPSGMEVMK 918



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 187/433 (43%), Gaps = 113/433 (26%)

Query: 547 LGCLNLEHFPEILEKME----HLKRIYSDRTPITEL-------PSSFENLP------GLE 589
           + C+     PE L K+E     L +++    P+T L        S+ + +P       LE
Sbjct: 595 MRCMPFGFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLE 654

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
           +L ++ C  L  LP +I +L  L  + +    ++  LP+   L ++ R L+  HC  L++
Sbjct: 655 ILNLKFCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNLKSLDR-LNLYHCSKLKT 713

Query: 649 FPRTFLLGLSAMGL-----------LHISDYAVREIPQE-------------IAYLSSLE 684
           FP+ F   +S + L           LH+ +     I +E               +L+ + 
Sbjct: 714 FPK-FSTNISVLNLNLTNIEDFPSNLHLENLVEFRISKEESDEKQWEEEKPLTPFLAMML 772

Query: 685 ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
              L+  + E+LP++++  S  +       N+ Q        LK L +I+C  L++LP  
Sbjct: 773 SPTLTSLHLENLPSLVELTSSFQ-------NLNQ--------LKDLIIINCINLETLPT- 816

Query: 745 PFCLESLD---LTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQL------LTV 795
              L+SLD    +GC+ LRS PE+   +  L L++     ++ E+P  ++       L++
Sbjct: 817 GINLQSLDYLCFSGCSQLRSFPEISTNISVLYLDET----AIEEVPWWIEKFSNLTELSM 872

Query: 796 RNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNC-----LK 850
            +C+RL+    + L + +L         KH          LK A     F NC     ++
Sbjct: 873 NSCSRLKC---VFLHMSKL---------KH----------LKEAL----FRNCGTLTRVE 906

Query: 851 LNG--------KANN-KILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSE 901
           L+G        KA+N    + SL ++    +    L  E  ++ + S +   ++     E
Sbjct: 907 LSGYPSGMEVMKADNIDTASSSLPKVVLSFLDCFNLDPETVLHHQESIIFNYMLFTGKEE 966

Query: 902 IPDWFSNQSSGSS 914
           +P +F+ +++GSS
Sbjct: 967 VPSYFTYRTTGSS 979


>gi|297791295|ref|XP_002863532.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309367|gb|EFH39791.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1184

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 197/670 (29%), Positives = 335/670 (50%), Gaps = 56/670 (8%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQK----QMLST 64
           I+G+ GM GIGKTTL K +F+++ ++F     + ++RG S  +   + L K    ++L+ 
Sbjct: 230 IIGVVGMPGIGKTTLLKELFNKWQNKFNRCALIDEIRGKSNPSEDFDILPKLLVRELLAF 289

Query: 65  TLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            +S    V  P      K  +   K+L++LDDV++  Q+  L+G+ D   +GSRIV+ T 
Sbjct: 290 NVSTLENVEDPY--EVFKGLLLNEKVLVILDDVSKSEQIDALLGKRDWITEGSRIVIATN 347

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           D  +L+ +  +    Y V  L  ++  + F   AF E + PED    S+  V + +G PL
Sbjct: 348 DMSLLKDWVTD---TYVVPLLNHQDGLKLFHYHAFDEANPPEDFMQLSKEFVHFARGLPL 404

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L++LG  L  K +  W +       + ES    I  + ++S+++L+   K  FLDIACF
Sbjct: 405 ALKILGKELYGKGRLQWEE---KRKLLAESPSPFIESVFRVSYDELSSDQKKAFLDIACF 461

Query: 245 FEGEDKDFVASILDDSES-DVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEP 303
              +D  +V S+L  SE+   +  L DK L++     + MHD+L    R++  + S ++ 
Sbjct: 462 -RSQDVAYVESLLASSEAMSAVKALTDKFLINTCDGRVEMHDLLYTFSRELDPKTSTEDD 520

Query: 304 GKRSRLWDPKEISR-----VLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLF 357
               RLW  ++I +     V++       + GIFLDLS++KG  +L    F  M+NLR  
Sbjct: 521 RTGRRLWRHQDIIKEGKINVVQKEMRAAHVRGIFLDLSQVKGETSLAKDHFNRMTNLRYL 580

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
           K Y           S   +E  + +++ +P+GL    K++R LHW  +PL  LP  F P 
Sbjct: 581 KVY----------NSHCPQECKTENRINIPDGLKLPLKEVRCLHWLKFPLDELPEAFNPI 630

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKY---------------LSALSFKGCQSLR 462
           NLV+L L  S++E+ WEG+K        +  +               L  L+ +GC  L 
Sbjct: 631 NLVDLKLPYSEIERLWEGDKDTPVLKWVDLNHSSMLSSLSGLSKAPNLQGLNLEGCTRLE 690

Query: 463 SFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDL 522
           S  +++      ++  S C +  +FP I   +  L+L ++AI ++P ++  L  L +L++
Sbjct: 691 SL-ADVDSKSLKSLTLSGCTSFKKFPLIPENLEALHLDRTAISQLPDNVVNLKKLVLLNM 749

Query: 523 RGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
           + C+ L+ I T   KL++L  L+L GC  L++FPE+      LK +  DRT I  +P   
Sbjct: 750 KDCELLENIPTCVDKLKALQKLVLSGCKKLQNFPEV--NKSSLKILLLDRTAIKTMP--- 804

Query: 583 ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSS 641
             LP ++ L +     L  +P +I  L  L  + L    +++ +P    L   L+  D+ 
Sbjct: 805 -QLPSVQYLCLSFNDHLSCIPADINQLSQLTRLDLKYCKSLTSVPE---LPPNLQYFDAD 860

Query: 642 HCKGLESFPR 651
            C  L++  +
Sbjct: 861 GCSALKTVAK 870



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 195/485 (40%), Gaps = 87/485 (17%)

Query: 586  PGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKG 645
            P L+ L +E C++L++L D                           S  L+SL  S C  
Sbjct: 676  PNLQGLNLEGCTRLESLAD-------------------------VDSKSLKSLTLSGCTS 710

Query: 646  LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF-ESLPAIIKQMS 704
             + FP    L    +  LH+   A+ ++P  +  L  L +L +      E++P  + ++ 
Sbjct: 711  FKKFP----LIPENLEALHLDRTAISQLPDNVVNLKKLVLLNMKDCELLENIPTCVDKLK 766

Query: 705  QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP----FCLESLDLTGC---- 756
             L+ + L     LQ+ PE+      + L+D   ++++P LP     CL   D   C    
Sbjct: 767  ALQKLVLSGCKKLQNFPEVNKSSLKILLLDRTAIKTMPQLPSVQYLCLSFNDHLSCIPAD 826

Query: 757  -NMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELD 815
             N L  L  L       +L+ C  L S+PELP  LQ      C+ L+++ + L       
Sbjct: 827  INQLSQLTRL-------DLKYCKSLTSVPELPPNLQYFDADGCSALKTVAKPL------- 872

Query: 816  ASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASL 875
            A ++  +  H                 F FTNC  L   A  +I + +  + + ++ A  
Sbjct: 873  ARIMPTVQNH---------------CTFNFTNCGNLEQAAKEEIASYAQRKCQLLSDA-- 915

Query: 876  RLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCA 935
            R  Y    +E LS         PG E+P WF +   GS + ++L PH   ++L G A CA
Sbjct: 916  RKHY----DEGLSSEALFTTCFPGCEVPSWFCHDGVGSRLELKLLPHWHDKSLSGIALCA 971

Query: 936  VLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHV-DLGYNSRYIEDLIDSDRVILGFKP- 993
            V+    V+ D      V+  F ++    S       +G  +R  E  I S+ V + +   
Sbjct: 972  VISFPGVE-DQTSGLSVACTFTIKAGRTSWIPFTCPVGSWTREGE-TIQSNHVFIAYISC 1029

Query: 994  -----CLNVGFPDGYHHTIATFKFF---AERKFYKIKRCGLCPVY-ANPSETKDNTFTIN 1044
                 CL     D  + T A+ +F       +  K+ RCGL  VY  N ++   +  T +
Sbjct: 1030 PHTIRCLKDENSDKCNFTEASLEFTVTGGTSEIGKVLRCGLSLVYEKNKNKNSSHEATYD 1089

Query: 1045 FATEV 1049
               EV
Sbjct: 1090 MPVEV 1094


>gi|12597847|gb|AAG60157.1|AC074360_22 downy mildew resistance protein RPP5, putative [Arabidopsis
           thaliana]
          Length = 1202

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 225/761 (29%), Positives = 350/761 (45%), Gaps = 125/761 (16%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAGG 53
           S  V++VGI G  GIGKTT+A+A+F + S  F+GS F+               N +    
Sbjct: 201 SKEVRMVGISGSSGIGKTTIARALFKRLSRHFQGSTFIDRAFVSYSRNIYSGANPDDPNM 260

Query: 54  LEHLQKQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQ 112
              LQ   LS  L +K +++  P      +ER++  K+LI++DD++++  L  L+G+   
Sbjct: 261 KLQLQGHFLSEILGKKDIKIDDPAA---LEERLKHQKVLIIIDDLDDIMVLDTLVGQTQW 317

Query: 113 FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
           FG GSRI+V T DK  L     +   IY V+      A +  C  AFK+N+ P+      
Sbjct: 318 FGYGSRIIVVTNDKHFLIAHGIDH--IYEVSFPTDVHACQMLCQSAFKQNYAPKGFEDLV 375

Query: 173 RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
             VV +    PL L +LG  L  +   +W  +L  L      +   I  IL+IS++ L  
Sbjct: 376 VDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDMLPRLENSLRID-GKIEKILRISYDGLES 434

Query: 233 RVKSIFLDIACFFEGEDKDFVASILDDSE-SDVLDILIDKSLVSISGNFLNMHDILQEMG 291
             + IF  IAC F   +   + S+L DS+ S  L+ L DKSL+ +   ++ MH  LQEMG
Sbjct: 435 EDQEIFRHIACLFNHMEVTTIKSLLADSDVSFALENLADKSLIHVRQGYVVMHRSLQEMG 494

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IVR +S  +PG+R  L DP +I  +L    GT  + GI LD+  I+ +++  RAF  M
Sbjct: 495 RKIVRIQSIDKPGEREFLVDPNDIHDILNACTGTQKVLGISLDIRNIRELDVHERAFKGM 554

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
           SNLR        F EI+          L    + LP   DYLP+ L+ L W  +P+R +P
Sbjct: 555 SNLR--------FLEIKNF-------GLKEDGLHLPPSFDYLPRTLKLLCWSKFPMRCMP 599

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGE----------------------------------K 437
             F+P+NLV+L ++ SK+ + WEG                                   K
Sbjct: 600 FGFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLEILNLK 659

Query: 438 AC-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
            C     +PSSI+N   L  L    C+SL+  P+  +      +N  +C  L  FP+ S 
Sbjct: 660 FCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNLKSLDRLNLYHCSKLKTFPKFST 719

Query: 493 KVTRLYLGQSAIEEVPSS--IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
            ++ L L  + IE+ PS+  +E L +  +      ++            +++    L  L
Sbjct: 720 NISVLNLNLTNIEDFPSNLHLENLVEFRISKEESDEKQWEEEKPLTPFLAMMLSPTLTSL 779

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGS 608
           +LE+ P ++                 EL SSF+NL  L+ L + +C  L+ LP   N+ S
Sbjct: 780 HLENLPSLV-----------------ELTSSFQNLNQLKDLIIINCINLETLPTGINLQS 822

Query: 609 LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY 668
           L+YL +                          S C  L SFP       + + +L++ + 
Sbjct: 823 LDYLCF--------------------------SGCSQLRSFPEIS----TNISVLYLDET 852

Query: 669 AVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
           A+ E+P  I   S+L    LS N+   L  +   MS+L+ +
Sbjct: 853 AIEEVPWWIEKFSNL--TELSMNSCSRLKCVFLHMSKLKHL 891



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 82/190 (43%), Gaps = 35/190 (18%)

Query: 407 LRTLPSNFKPKNLVELNLRCSKVE---QPWEGEKACVP---------------------- 441
           +   PSN   +NLVE   R SK E   + WE EK   P                      
Sbjct: 731 IEDFPSNLHLENLVEF--RISKEESDEKQWEEEKPLTPFLAMMLSPTLTSLHLENLPSLV 788

Query: 442 ---SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLY 498
              SS QN   L  L    C +L + P+ ++      + FS C  L  FP+IS  ++ LY
Sbjct: 789 ELTSSFQNLNQLKDLIIINCINLETLPTGINLQSLDYLCFSGCSQLRSFPEISTNISVLY 848

Query: 499 LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC-----LNLE 553
           L ++AIEEVP  IE  ++L  L +  C RLK +     KL+ L   +   C     + L 
Sbjct: 849 LDETAIEEVPWWIEKFSNLTELSMNSCSRLKCVFLHMSKLKHLKEALFRNCGTLTRVELS 908

Query: 554 HFPEILEKME 563
            +P  +E M+
Sbjct: 909 GYPSGMEVMK 918



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 187/433 (43%), Gaps = 113/433 (26%)

Query: 547 LGCLNLEHFPEILEKME----HLKRIYSDRTPITEL-------PSSFENLP------GLE 589
           + C+     PE L K+E     L +++    P+T L        S+ + +P       LE
Sbjct: 595 MRCMPFGFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLE 654

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
           +L ++ C  L  LP +I +L  L  + +    ++  LP+   L ++ R L+  HC  L++
Sbjct: 655 ILNLKFCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNLKSLDR-LNLYHCSKLKT 713

Query: 649 FPRTFLLGLSAMGL-----------LHISDYAVREIPQE-------------IAYLSSLE 684
           FP+ F   +S + L           LH+ +     I +E               +L+ + 
Sbjct: 714 FPK-FSTNISVLNLNLTNIEDFPSNLHLENLVEFRISKEESDEKQWEEEKPLTPFLAMML 772

Query: 685 ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
              L+  + E+LP++++  S  +       N+ Q        LK L +I+C  L++LP  
Sbjct: 773 SPTLTSLHLENLPSLVELTSSFQ-------NLNQ--------LKDLIIINCINLETLPT- 816

Query: 745 PFCLESLD---LTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQL------LTV 795
              L+SLD    +GC+ LRS PE+   +  L L++     ++ E+P  ++       L++
Sbjct: 817 GINLQSLDYLCFSGCSQLRSFPEISTNISVLYLDET----AIEEVPWWIEKFSNLTELSM 872

Query: 796 RNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNC-----LK 850
            +C+RL+    + L + +L         KH          LK A     F NC     ++
Sbjct: 873 NSCSRLKC---VFLHMSKL---------KH----------LKEAL----FRNCGTLTRVE 906

Query: 851 LNG--------KANN-KILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSE 901
           L+G        KA+N    + SL ++    +    L  E  ++ + S +   ++     E
Sbjct: 907 LSGYPSGMEVMKADNIDTASSSLPKVVLSFLDCFNLDPETVLHHQESIIFNYMLFTGKEE 966

Query: 902 IPDWFSNQSSGSS 914
           +P +F+ +++GSS
Sbjct: 967 VPSYFTYRTTGSS 979


>gi|15242954|ref|NP_200620.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9759538|dbj|BAB11004.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332009616|gb|AED96999.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1046

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 221/752 (29%), Positives = 346/752 (46%), Gaps = 144/752 (19%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETA---GGLE-H 56
           +D  D   IVGI+G  GIGKTT+A+A+  + S  F+ +CF+ ++RG+  +     GL+  
Sbjct: 204 LDYEDGAMIVGIYGPAGIGKTTIARALHSRLSSSFQLTCFMENIRGSYNSGLDEYGLKLR 263

Query: 57  LQKQMLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           LQ+Q+LS  L+      G  I H     ER+   K+LI+LDDV+++ QL+ L  E + FG
Sbjct: 264 LQEQLLSKVLNHD----GIRINHLGAIPERLCDQKVLIILDDVDDLQQLEALANETNWFG 319

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSRI+VTT D+ +LE+   +  K Y V+    EEA + FC +AF+ +  P      +  
Sbjct: 320 PGSRIIVTTEDQELLEQH--DVNKKYHVDFPTREEACKIFCTYAFRRSFAPYGFEKLAER 377

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           V       PL L V+GS+L  K++  W  +L  L    + +I     +L++ ++ L    
Sbjct: 378 VTWLCSNLPLGLRVMGSTLRGKKEDDWEGILRRLENSLDRKID---GVLRVGYDHLCEDD 434

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS--GNFLNMHDILQE 289
           + ++L IA FF   D D V ++L +   DV   L  L  KSL+ IS  GN + MH +LQ 
Sbjct: 435 QFLYLLIAFFFNYVDDDHVKAMLVEDNLDVKLGLKTLAYKSLIQISAEGNIV-MHKLLQR 493

Query: 290 MGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFT 349
           +GR+ ++++   EP KR  L D +EI  VL++ KGT  + GI  D S +  + +   AF 
Sbjct: 494 VGREAIQRQ---EPTKRRILIDAREICDVLRYGKGTSNVSGISFDTSDMSEVTISDDAFK 550

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
            + +LR  K    ++                  ++ +P G+++ P  LR LHW+ YP + 
Sbjct: 551 RLHDLRFLKVTKSRYD--------------GKYRMHIPAGIEF-PCLLRLLHWEAYPSKC 595

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLH 469
           LP  F P+ LVELN++ S++E  W                       G QSLR+  +   
Sbjct: 596 LPPTFNPEFLVELNMQGSQLEHLW----------------------SGTQSLRNLKN--- 630

Query: 470 FVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
                 ++  +  NL E P ++                        +LE L+L  C+ L 
Sbjct: 631 ------MDLGWSPNLKELPDLTNAT---------------------NLEDLNLNSCESLV 663

Query: 530 RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
            I +SF  L  L  L +  C+NL+  P  +                        NL  LE
Sbjct: 664 EIPSSFSHLHKLKNLWMSYCINLQVIPAHM------------------------NLVSLE 699

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            + +  CS+   +P  + S    Y  +A  +    + +S+AL   L  L+ S+ +     
Sbjct: 700 RVTMTGCSRFRKIP--VISTHINYLDIAHNTEFEVVHASIALWCRLHYLNMSYNENF--- 754

Query: 650 PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
                     MGL H+                SL  L L  ++ E +P  IK + QL  +
Sbjct: 755 ----------MGLTHLP--------------MSLTQLILRYSDIERIPDCIKALHQLFSL 790

Query: 710 HLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
            L     L SLPELP  L  L   DC+ L+++
Sbjct: 791 DLTGCRRLASLPELPGSLLDLEAEDCESLETV 822



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 160/394 (40%), Gaps = 73/394 (18%)

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
           H P  +E    L+ ++ +  P   LP +F   P   V      S+L++L     SL  L 
Sbjct: 572 HIPAGIEFPCLLRLLHWEAYPSKCLPPTFN--PEFLVELNMQGSQLEHLWSGTQSLRNLK 629

Query: 614 YI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAV 670
            + L  +  + +LP     +N L  L+ + C+ L   P +F  L  L  + + +  +  V
Sbjct: 630 NMDLGWSPNLKELPDLTNATN-LEDLNLNSCESLVEIPSSFSHLHKLKNLWMSYCINLQV 688

Query: 671 REIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY 729
             IP  +  L SLE + ++G + F  +P I   ++ L   H  +F ++ +   L   L Y
Sbjct: 689 --IPAHMN-LVSLERVTMTGCSRFRKIPVISTHINYLDIAHNTEFEVVHASIALWCRLHY 745

Query: 730 LHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYL------NLEDCNMLRSL 783
           L++   +    L  LP  L  L L   ++ R    +P C++ L      +L  C  L SL
Sbjct: 746 LNMSYNENFMGLTHLPMSLTQLILRYSDIER----IPDCIKALHQLFSLDLTGCRRLASL 801

Query: 784 PELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICF 843
           PELP  L  L   +C  L+++   L                H+P                
Sbjct: 802 PELPGSLLDLEAEDCESLETVFSPL----------------HTP------------RALL 833

Query: 844 EFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIP 903
            FTNC KL G+A                          AI  + SE+ G  + LPG E+P
Sbjct: 834 NFTNCFKLGGQA------------------------RRAIIRRRSEIIGKAL-LPGREVP 868

Query: 904 DWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
             F +++ G+S+ I L  +    + I +  C V+
Sbjct: 869 AEFDHRAKGNSLTIILNGYRPSYDFIQYLVCVVI 902


>gi|334185068|ref|NP_187072.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332640533|gb|AEE74054.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 867

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 202/631 (32%), Positives = 322/631 (51%), Gaps = 48/631 (7%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVR-GNSETAGGLEHLQK-QM 61
           SD ++ +GIWG  G+GKTT+A+++++Q S +F+ S F+  ++   +  A   ++ +K Q+
Sbjct: 255 SDEMKTIGIWGPPGVGKTTIARSLYNQHSDKFQLSVFMESIKTAYTIPACSDDYYEKLQL 314

Query: 62  LSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
               LS+        IPH    +ER+   K+L+V+DDVN+  Q+  L  E D  G GSRI
Sbjct: 315 QQRFLSQITNQENVQIPHLGVAQERLNDKKVLVVIDDVNQSVQVDALAKENDWLGPGSRI 374

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TT+D+ +L     E   IY V+   +EEA + FC  AF +    +     ++ V + +
Sbjct: 375 IITTQDRGILRAHGIEH--IYEVDYPNYEEALQIFCMHAFGQKSPYDGFEELAQQVTTLS 432

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
              PL L+V+GS      K  W   L  +    + +I  I   LK+S++ L    KS+FL
Sbjct: 433 GRLPLGLKVMGSYFRGMTKQEWTMALPRVRTHLDGKIESI---LKLSYDALCDVDKSLFL 489

Query: 240 DIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
            +AC F  +D + V   L    SD+   L +L +KSL+ +    + MH +L ++GR+IVR
Sbjct: 490 HLACSFHNDDTELVEQQLGKKFSDLRQGLHVLAEKSLIHMDLRLIRMHVLLAQLGREIVR 549

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSNLR 355
           ++S  EPG+R  L D  +I  VL  + G+ ++ GI  D + + K +++  +AF  MSNL+
Sbjct: 550 KQSIHEPGQRQFLVDATDIREVLTDDTGSRSVIGIDFDFNTMEKELDISEKAFRGMSNLQ 609

Query: 356 LFKFYVPKF--YEIEKLPSMSTEEQLSY-SKVQLPNGLDYLPKKLRYLH--WD-TYPLRT 409
             + Y   F  + +           L Y SK+  P GLDYLP KL  L   W+   PLR 
Sbjct: 610 FIRIYGDLFSRHGVYYFGGRGHRVSLDYDSKLHFPRGLDYLPGKLSKLEKLWEGIQPLR- 668

Query: 410 LPSNFKPKNLVELNLRCSK--VEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSN 467
                   NL  L+L CS+   E P           +     L  LS + C SL   PS+
Sbjct: 669 --------NLEWLDLTCSRNLKELP----------DLSTATNLQRLSIERCSSLVKLPSS 710

Query: 468 LHFVCPV-TINFSYCVNLIEFPQISGKVTRLYLGQ----SAIEEVPSSIECLTDLEVLDL 522
           +     +  IN   C++L+E P   G +T L        S++ E+P+S   L ++E L+ 
Sbjct: 711 IGEATNLKKINLRECLSLVELPSSFGNLTNLQELDLRECSSLVELPTSFGNLANVESLEF 770

Query: 523 RGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR-TPITELPSS 581
             C  L ++ ++F  L +L  L L  C ++   P     + +L+ +   + + + ELPSS
Sbjct: 771 YECSSLVKLPSTFGNLTNLRVLGLRECSSMVELPSSFGNLTNLQVLNLRKCSTLVELPSS 830

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           F NL  LE L + DCS L  LP + G++ YL
Sbjct: 831 FVNLTNLENLDLRDCSSL--LPSSFGNVTYL 859



 Score = 45.4 bits (106), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 27/220 (12%)

Query: 554 HFPEILE----KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK-LDNLPDNIGS 608
           HFP  L+    K+  L++++    P+        NL  L++     CS+ L  LPD   +
Sbjct: 642 HFPRGLDYLPGKLSKLEKLWEGIQPL-------RNLEWLDLT----CSRNLKELPDLSTA 690

Query: 609 LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHIS 666
                  +   S++ +LPSS+  +  L+ ++   C  L   P +F  L  L  + L   S
Sbjct: 691 TNLQRLSIERCSSLVKLPSSIGEATNLKKINLRECLSLVELPSSFGNLTNLQELDLRECS 750

Query: 667 DYAVREIPQEIAYLSSLEIL-YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
             ++ E+P     L+++E L +   ++   LP+    ++ LR + L + + +  LP    
Sbjct: 751 --SLVELPTSFGNLANVESLEFYECSSLVKLPSTFGNLTNLRVLGLRECSSMVELPSSFG 808

Query: 726 CLKYLHLIDCKMLQSLPVLPFC------LESLDLTGCNML 759
            L  L +++ +   +L  LP        LE+LDL  C+ L
Sbjct: 809 NLTNLQVLNLRKCSTLVELPSSFVNLTNLENLDLRDCSSL 848


>gi|357516579|ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355522600|gb|AET03054.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 1210

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 298/1068 (27%), Positives = 446/1068 (41%), Gaps = 283/1068 (26%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM-- 61
            S+ V+++G++GMGG+GKTTLAKA+F+     F+  CF+S+VR  +    GL  +Q  +  
Sbjct: 59   SNNVKVLGLYGMGGVGKTTLAKALFNSLVGRFKRRCFISNVRQFASKDDGLVSIQNNIIK 118

Query: 62   -LSTTLSEKLEVAGPNIPHFTKER-VRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
             LS+    +  ++       T +R VR  ++L+VLDDV+ V QL  LIG+ + F +GS I
Sbjct: 119  DLSSQEGTRSFISDVKAGISTIKRIVRENRVLLVLDDVDHVNQLDALIGKREWFHEGSCI 178

Query: 120  VVTTRDKRVL-EKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            ++TTRD  VL EK   E   +Y V  L  EEA+++                         
Sbjct: 179  IITTRDTTVLPEKHVNE---LYEVTELYPEEAWKN------------------------- 210

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
                                  W  VL  L  I    +HD+   LKIS++ L  + K IF
Sbjct: 211  ------------------ELEEWEDVLEKLRTIRPGNLHDV---LKISYDGLEEQEKCIF 249

Query: 239  LDIACFF--EGEDKDFVASILDD---SESDVLDILIDKSLVSI-SGNFLNMHDILQEMGR 292
            LDIACFF   G  +D V  +L            +L++K L+ +   N L MHD +++MGR
Sbjct: 250  LDIACFFVQMGMKRDDVIDVLRGCGFRGEIATTVLVEKCLIKVREDNTLWMHDQIRDMGR 309

Query: 293  QIVRQESEKEPGKRSRLWDPKEISRVLKHNK----------GTDAIEGIFLDLS------ 336
            QIV  E+  +PG RSRLWD  EI  VLK  K          GT  I+GI LD        
Sbjct: 310  QIVLDENHVDPGMRSRLWDRAEIMSVLKSKKVKIQKHSKMHGTRCIQGIVLDFKERSTAQ 369

Query: 337  ----KIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDY 392
                K   + LD ++F  M NLRL +           + ++S E +             +
Sbjct: 370  PQAEKYDQVTLDTKSFEPMVNLRLLQ-----------IDNLSLEGK-------------F 405

Query: 393  LPKKLRYLHWDTYPLRTLPSNFKPKNLVELNL-RCSKVEQPWEGEKACVPSSIQNFKYLS 451
            LP +L++L W   PL  +  N  P+ L  L+L    K++  W  +   VP +      L 
Sbjct: 406  LPDELKWLQWRGCPLECIHLNTLPRELAVLDLSNGEKIKSLWGLKSHKVPET------LM 459

Query: 452  ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNL------------------------IEF 487
             ++   C  L + P     +    IN   C+NL                        IE 
Sbjct: 460  VMNLSDCYQLAAIPDLSWCLGLEKINLVNCINLTRIHESIGSLTTLLNLNLTRCENLIEL 519

Query: 488  PQ-ISG--------------------------KVTRLYLGQSAIEEVPSSIECLTDLEVL 520
            P  +SG                           +  L   ++AI ++P SI  LT LE L
Sbjct: 520  PSDVSGLKHLESLILSECSKLKALPENIGMLKSLKTLAADKTAIVKLPESIFRLTKLERL 579

Query: 521  DLRGCKRLKRISTSFCKL-----------------------RSLVTLILLGCLNLEHFPE 557
             L  C  L+R+     KL                       +SL  L L+GC +L   P+
Sbjct: 580  VLDSCLYLRRLPNCIGKLCSLLELSLNHSGLQELHNTVGFLKSLEKLSLIGCKSLTLMPD 639

Query: 558  ILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILA 617
             +  +E L  + +  + I ELPS+  +L  L +L V DC  L+ LPD+  +L  +  +  
Sbjct: 640  SIGNLESLTELLASNSGIKELPSTIGSLSYLRILSVGDCKLLNKLPDSFKNLASIIELKL 699

Query: 618  AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI 677
              ++I  LP  +     LR L+  +C  LES P + +  L+++  L+I +  +RE+P  I
Sbjct: 700  DGTSIRYLPDQIGELKQLRKLEIGNCCNLESLPES-IGQLASLTTLNIVNGNIRELPASI 758

Query: 678  AYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHL---------EDFNMLQSLPEL---- 723
              L +L  L L+     + LPA +  +  L  + +         E F ML  L  L    
Sbjct: 759  GLLENLVTLTLNQCKMLKQLPASVGNLKSLCHLMMMGTAMSDLPESFGMLSRLRTLRMAK 818

Query: 724  --PLCLKYLHLIDCKMLQS-------LPVLPFC-----------------LESLDLTGCN 757
               L  KY    D  ++ S       L  L  C                 L++L+L G N
Sbjct: 819  NPDLVSKYAENTDSFVIPSSFCNLTLLSELDACAWRLSGKIPDEFEKLSLLKTLNL-GQN 877

Query: 758  MLRSLPE----LPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQE 813
               SLP     L + L+ L+L +C  L SLP LP  L +L   NC  L+++         
Sbjct: 878  NFHSLPSSLKGLSI-LKELSLPNCTELISLPSLPSSLIMLNADNCYALETIH-------- 928

Query: 814  LDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHM-AI 872
             D S LE L +                   + TNC KL             + I  +  +
Sbjct: 929  -DMSNLESLEE------------------LKLTNCKKL-------------IDIPGLECL 956

Query: 873  ASLRLGYEMAINEKLSEL--RGSLIVL--------PGSEIPDWFSNQS 910
             SLR  Y    N   S++  R S +VL        PG+++P+W S ++
Sbjct: 957  KSLRRLYLSGCNACSSKVCKRLSKVVLRNFQNLSMPGTKLPEWLSRET 1004


>gi|399920209|gb|AFP55556.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1117

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 211/683 (30%), Positives = 332/683 (48%), Gaps = 118/683 (17%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL-SEKLEVAGP-NI 77
           KTTLA+ ++++ SH+FE   F+++VR  S T  GL HLQKQ+LS  +  E ++V    N 
Sbjct: 230 KTTLAQLVYEKISHQFEVCIFLANVREVSATR-GLVHLQKQILSQIMKKENVKVWNVYNG 288

Query: 78  PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
            +  K  +   ++L+VLDDV++  QL+ L+GE D F                       +
Sbjct: 289 NNMIKRCLCNKEVLLVLDDVDQSEQLENLVGEKDWF-----------------------E 325

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           K Y++ GL   EA + F   AF+++   ED    S+S V Y  G PL L+ LGS L  + 
Sbjct: 326 KPYKLKGLNENEALQLFSWKAFRKHEPEEDYAEQSKSFVKYAGGLPLALKTLGSFLNGRS 385

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W   L  L+   ++    ++ ILKISF+ L    K IFLDIACF      +F+  ++
Sbjct: 386 PDEWNSALAKLH---QTPNITVFKILKISFDGLDEMEKKIFLDIACFRRLYRNEFMIELV 442

Query: 258 DDSE---SDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           D S+        +L +KSL++IS  N +++HD++ EM  +IVRQE+E EPG RSRL    
Sbjct: 443 DSSDPCNHITRRVLAEKSLLTISSDNQVDVHDLIHEMACEIVRQENE-EPGGRSRLCLRN 501

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
            I  V   N GT+AIEGI LDL++++  + +  AF+ M  L+L   +             
Sbjct: 502 NIFHVFTQNTGTEAIEGILLDLAELEEADWNLEAFSKMCKLKLLYIH------------- 548

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
                     ++L  G  +LP  LR+L+W  YP ++LP  F+P  LVEL+L  SK++  W
Sbjct: 549 ---------NLRLSVGPKFLPNALRFLNWSWYPSKSLPPCFQPDELVELSLPYSKIDHLW 599

Query: 434 EGEK----------------------ACVPS-----------------SIQNFKYLSALS 454
            G+K                        +P+                 SI   K L   +
Sbjct: 600 NGKKCLDNLKSIDLSYSINLTRTPDFTGIPNLEKLILEGCTNLVDIHPSIALLKRLKIWN 659

Query: 455 FKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP---QISGKVTRLYLGQSAIEEVPSSI 511
            + CQS++S PS ++     T++ + C  L   P   Q + ++++L L  +A+E++PS  
Sbjct: 660 LRNCQSIKSLPSEVYMEFLETLDVTGCSKLKMIPKFMQKTKRLSKLSLSGTAVEKLPSIE 719

Query: 512 ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSD 571
           +    L  LDL G  R +R  + F +        +LG  +   FP    K  H       
Sbjct: 720 QLSESLVELDLSGVVRRERPYSLFLQQ-------ILGVSSFGLFP---RKSPH------- 762

Query: 572 RTPITELPSSFENLPGLEVLFVEDCSKLDN-LPDNIGSLEYLYYILAAASAISQLPSSVA 630
             P+  L +S ++   L  L++ DC+  +  LP++IGSL  L  +    +    LP+S+ 
Sbjct: 763 --PLIPLLASLKHFSSLTELYLNDCNLSEGELPNDIGSLSSLVRLELRGNNFVSLPASIH 820

Query: 631 LSNMLRSLDSSHCKGLESFPRTF 653
           L + LR  +  +CK L+  P  +
Sbjct: 821 LLSKLRRFNVENCKRLQQLPELW 843



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 188/456 (41%), Gaps = 84/456 (18%)

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
           ++  L L  S I+ + +  +CL +L+ +DL     L R +  F  + +L  LIL GC NL
Sbjct: 584 ELVELSLPYSKIDHLWNGKKCLDNLKSIDLSYSINLTR-TPDFTGIPNLEKLILEGCTNL 642

Query: 553 EHFPEILEKMEHLKRIYSDRT--PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
                 +  ++ LK I++ R    I  LPS    +  LE L V  CSKL  +P  +   +
Sbjct: 643 VDIHPSIALLKRLK-IWNLRNCQSIKSLPSEV-YMEFLETLDVTGCSKLKMIPKFMQKTK 700

Query: 611 YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL---LGLSAMGLL-HIS 666
            L  +  + +A+ +LPS   LS  L  LD S     E     FL   LG+S+ GL    S
Sbjct: 701 RLSKLSLSGTAVEKLPSIEQLSESLVELDLSGVVRRERPYSLFLQQILGVSSFGLFPRKS 760

Query: 667 DYAVREIPQEIAYLSSLEILYLSGNNFES--LPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
            + +  +   + + SSL  LYL+  N     LP  I  +S L  + L   N + SLP   
Sbjct: 761 PHPLIPLLASLKHFSSLTELYLNDCNLSEGELPNDIGSLSSLVRLELRGNNFV-SLP--- 816

Query: 725 LCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLP 784
                +HL+                                   L+  N+E+C  L+ LP
Sbjct: 817 ---ASIHLLSK---------------------------------LRRFNVENCKRLQQLP 840

Query: 785 ELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFE 844
           EL     L    NC  LQ                  +++ H                   
Sbjct: 841 ELWANDVLSRTDNCTSLQLF--------------FGRITTH---------------FWLN 871

Query: 845 FTNCLKLNGKANNKILADSLLRIRHMAIASL-RLGYEMAINEKLSELRGSL-IVLPGSEI 902
             NCL + G  +   L  S+L+ R + I  L R    + + E        L  V+PGSEI
Sbjct: 872 CVNCLSMVGNQDVSYLLYSVLK-RWIEIQVLSRCDMTVHMQETHRRPLEYLDFVIPGSEI 930

Query: 903 PDWFSNQSSGSSICIQLPPHSSCRN-LIGFAFCAVL 937
           P+WF+NQS G  +  +L P  +C +  IGFA CA++
Sbjct: 931 PEWFNNQSVGDRVTEKLLPWDACNSKWIGFAVCALI 966


>gi|357458903|ref|XP_003599732.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|357474669|ref|XP_003607619.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355488780|gb|AES69983.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355508674|gb|AES89816.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1058

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 225/736 (30%), Positives = 350/736 (47%), Gaps = 112/736 (15%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           DS D V++VGI GMGG+GKTTLA  ++++ SH+F   C + D+        GL   QK +
Sbjct: 207 DSLDDVRVVGICGMGGVGKTTLATILYNKISHQFPVFCLIDDL-SKIYRDDGLIGAQKLI 265

Query: 62  LSTTL-SEKLEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           L  TL  E+L+     N  +  + R+  +K LI+LD+V++V QL++L    +  G GSRI
Sbjct: 266 LHQTLVEEQLQTCNIYNASNLIQSRLHCVKALIILDNVDQVEQLEKLAVNREWLGAGSRI 325

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++ +RD+ +L+++  +   +Y+V  L   ++ + F   AFK +H     +  +  ++ Y 
Sbjct: 326 IIISRDEHILKEYGVDV--VYKVPLLNRTDSLQLFSRKAFKLDHIMSSYDKLASEILRYA 383

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            G PL ++VLGS L  +    W   L    R+ ES   DI D+L++SF+ L    K IFL
Sbjct: 384 NGLPLAIKVLGSFLYDRNIFEWKSALA---RLRESPNKDIMDVLRLSFDGLEEMEKEIFL 440

Query: 240 DIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISG-NFLNMHDILQEMGRQIV 295
            IACFF+G ++ +V ++L+     +D+ L +LIDKS++SIS  N + +H +LQE+GR+IV
Sbjct: 441 HIACFFKGGEEKYVKNVLNCCGFHADIGLRVLIDKSVISISTENNIEIHRLLQELGRKIV 500

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           +++S KE  K SR+W  K+   V+  N        +F+   K + I +     + M +LR
Sbjct: 501 QEKSIKESRKWSRMWLHKQFYNVMSENMEKKVGAIVFVRDKKERKIFIMAETLSKMIHLR 560

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
           L                      L    V L   L+ L  +LRY+ W+ YP + LPS+F 
Sbjct: 561 L----------------------LILKGVTLTGNLNGLSDELRYVEWNRYPFKYLPSSFL 598

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
           P  LVEL LR S V+Q W+ +K  +P+       L  L     +SLR  P          
Sbjct: 599 PNQLVELILRYSSVKQLWK-DKKYLPN-------LRTLDLSHSKSLRKMP---------- 640

Query: 476 INFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF 535
            NF                           EVP       +LE +   GC +L ++  S 
Sbjct: 641 -NFG--------------------------EVP-------NLERVSFEGCVKLVQMGPSI 666

Query: 536 CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
             LR LV L L  C  L                         +P +   L  LE L +  
Sbjct: 667 GVLRKLVYLNLKDCKKL-----------------------IIIPKNIFGLSSLECLNLSG 703

Query: 596 CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
           CSK+   P  +   +         S  S +     +     SL     K + S     LL
Sbjct: 704 CSKVFKNPRQLRKHDSSESSSHFQSTTSSILKWTRIH--FHSLYPYAHKDIASRFLHSLL 761

Query: 656 GLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN 715
            LS +  L IS   + ++P  I  L  LE L L GNNF ++P+ ++++S+L +++L+   
Sbjct: 762 SLSCLNDLDISFCGISQLPNAIGRLRWLERLNLGGNNFVTVPS-LRKLSRLAYLNLQHCK 820

Query: 716 MLQSLPELPLCLKYLH 731
           +L+SLP+LP      H
Sbjct: 821 LLKSLPQLPFATAIEH 836



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 83/197 (42%), Gaps = 54/197 (27%)

Query: 748 LESLDLTGCNMLRSLPELPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLP 805
           LE L+L G N + ++P L     L YLNL+ C +L+SLP+LP    +             
Sbjct: 789 LERLNLGGNNFV-TVPSLRKLSRLAYLNLQHCKLLKSLPQLPFATAI------------- 834

Query: 806 EILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKA--NNKILADS 863
           E  L +  LD +                +S KS  +     NC KL  +   N+ I +  
Sbjct: 835 EHDLHINNLDKN----------------KSWKSKGLV--IFNCPKLGERECWNSMIFSWM 876

Query: 864 LLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP-- 921
           +  IR    +S  +                 IV PGSEIP WF+NQS+  S+ I L P  
Sbjct: 877 IQLIRANPQSSSDV---------------IQIVTPGSEIPSWFNNQSNSRSLSIALSPVM 921

Query: 922 -HSSCRNLIGFAFCAVL 937
              +  N IG A CAV 
Sbjct: 922 HDDTDNNFIGIACCAVF 938


>gi|8843806|dbj|BAA97354.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1152

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 216/734 (29%), Positives = 340/734 (46%), Gaps = 115/734 (15%)

Query: 45  RGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQ 102
           R N +      HLQ+  LST L ++       I H     ER++  K+L+ +DD+++   
Sbjct: 157 RANPDDYNMKLHLQETFLSTILGKQ----NIKIDHLGALGERLKHQKVLLFIDDLDQQVV 212

Query: 103 LKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKEN 162
           L  L G++  FG GSRI+V T DK +L     E   IY+V     E A E  C +AF++N
Sbjct: 213 LNALAGQIQWFGSGSRIIVVTNDKHLLISHGIEN--IYQVCLPSKELALEMLCRYAFRQN 270

Query: 163 HCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDI 222
             P+     +  VV +    PL L VLGS L  + K +W  +L  L +  + +I      
Sbjct: 271 TPPDGFKKLAVEVVRHAGILPLGLNVLGSYLRGRNKRYWMDMLPRLRKGLDGKIQKA--- 327

Query: 223 LKISFNKL-TPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG 278
           L++ ++ L   + ++IF  IAC F  E  + +  +L DS+ +    L+ L+DKSLV++  
Sbjct: 328 LRVGYDGLDNKKDEAIFRHIACLFNFEKVNDIRLLLADSDLNFNIGLENLVDKSLVNVRS 387

Query: 279 NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI 338
           N + MH +LQEMGR+IVR +S  E G+R  L D ++I  VL  N GT  + GI LD+ +I
Sbjct: 388 NIVEMHCLLQEMGREIVRAQSN-EAGEREFLMDTEDICDVLDDNIGTKKMLGISLDVDEI 446

Query: 339 KG-INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKL 397
              +N+  +AF  M NLR    Y       +K+            ++ LP   DYLP KL
Sbjct: 447 DHELNVHEKAFQGMRNLRFLNIYTKALMSGQKI------------RLHLPENFDYLPPKL 494

Query: 398 RYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE--------------------- 436
           + L WD YP+R LPS+F+P+NLV+L ++ S++E+ WEG                      
Sbjct: 495 KLLCWDKYPMRCLPSSFRPENLVKLKMQESELEKLWEGVGSLTCLKDMDLEKSKNLKEIP 554

Query: 437 -------------KAC-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
                        K C     + SSIQN   L+ L+ +GC +L + P+ ++      ++ 
Sbjct: 555 DLSMATNLKTLNLKYCSSLVKISSSIQNLNKLTKLNMEGCTNLETLPAGINLKSLHRLDL 614

Query: 479 SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIEC--LTDLEVLDLRGCKRLKRISTSFC 536
             C  L  FP IS  ++ L+L +++IEE PS++    L DL +  +   K  + +    C
Sbjct: 615 RGCSRLRMFPDISNNISVLFLDKTSIEEFPSNLHLKKLFDLSMQQMNSEKLWEGVQPLTC 674

Query: 537 KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
            ++ L              P + +    L    SD   + ELP   +NL  L  L +  C
Sbjct: 675 LMKMLS-------------PPLAKNFNTL--YLSDIPSLVELPCGIQNLKKLMELSIRRC 719

Query: 597 SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
             L++LP    + +YL Y                       LD S C  L SFP      
Sbjct: 720 KNLESLPTG-ANFKYLDY-----------------------LDLSGCSKLRSFPDIS--- 752

Query: 657 LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM 716
            S +  L ++   + E+P  I     + + YL+      L  +   + +L+ +   DF+ 
Sbjct: 753 -STISCLCLNRTGIEEVPSWIENF--VRLTYLTMLECNKLKYVSLNIFKLKHLDKADFSD 809

Query: 717 LQSLPELPLCLKYL 730
             +L E+  C K +
Sbjct: 810 CGTLTEVSWCNKTI 823


>gi|12322541|gb|AAG51270.1|AC027135_11 disease resistance gene, putative [Arabidopsis thaliana]
          Length = 1198

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 225/761 (29%), Positives = 350/761 (45%), Gaps = 125/761 (16%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAGG 53
           S  V++VGI G  GIGKTT+A+A+F + S  F+GS F+               N +    
Sbjct: 201 SKEVRMVGISGSSGIGKTTIARALFKRLSRHFQGSTFIDRAFVSYSRNIYSGANPDDPNM 260

Query: 54  LEHLQKQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQ 112
              LQ   LS  L +K +++  P      +ER++  K+LI++DD++++  L  L+G+   
Sbjct: 261 KLQLQGHFLSEILGKKDIKIDDPAA---LEERLKHQKVLIIIDDLDDIMVLDTLVGQTQW 317

Query: 113 FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
           FG GSRI+V T DK  L     +   IY V+      A +  C  AFK+N+ P+      
Sbjct: 318 FGYGSRIIVVTNDKHFLIAHGIDH--IYEVSFPTDVHACQMLCQSAFKQNYAPKGFEDLV 375

Query: 173 RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
             VV +    PL L +LG  L  +   +W  +L  L      +   I  IL+IS++ L  
Sbjct: 376 VDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDMLPRLENSLRID-GKIEKILRISYDGLES 434

Query: 233 RVKSIFLDIACFFEGEDKDFVASILDDSE-SDVLDILIDKSLVSISGNFLNMHDILQEMG 291
             + IF  IAC F   +   + S+L DS+ S  L+ L DKSL+ +   ++ MH  LQEMG
Sbjct: 435 EDQEIFRHIACLFNHMEVTTIKSLLADSDVSFALENLADKSLIHVRQGYVVMHRSLQEMG 494

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IVR +S  +PG+R  L DP +I  +L    GT  + GI LD+  I+ +++  RAF  M
Sbjct: 495 RKIVRIQSIDKPGEREFLVDPNDIHDILNACTGTQKVLGISLDIRNIRELDVHERAFKGM 554

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
           SNLR        F EI+          L    + LP   DYLP+ L+ L W  +P+R +P
Sbjct: 555 SNLR--------FLEIKNFG-------LKEDGLHLPPSFDYLPRTLKLLCWSKFPMRCMP 599

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGE----------------------------------K 437
             F+P+NLV+L ++ SK+ + WEG                                   K
Sbjct: 600 FGFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLEILNLK 659

Query: 438 AC-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
            C     +PSSI+N   L  L    C+SL+  P+  +      +N  +C  L  FP+ S 
Sbjct: 660 FCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNLKSLDRLNLYHCSKLKTFPKFST 719

Query: 493 KVTRLYLGQSAIEEVPSS--IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
            ++ L L  + IE+ PS+  +E L +  +      ++            +++    L  L
Sbjct: 720 NISVLNLNLTNIEDFPSNLHLENLVEFRISKEESDEKQWEEEKPLTPFLAMMLSPTLTSL 779

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGS 608
           +LE+ P ++                 EL SSF+NL  L+ L + +C  L+ LP   N+ S
Sbjct: 780 HLENLPSLV-----------------ELTSSFQNLNQLKDLIIINCINLETLPTGINLQS 822

Query: 609 LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY 668
           L+YL +                          S C  L SFP       + + +L++ + 
Sbjct: 823 LDYLCF--------------------------SGCSQLRSFPEIS----TNISVLYLDET 852

Query: 669 AVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
           A+ E+P  I   S+L    LS N+   L  +   MS+L+ +
Sbjct: 853 AIEEVPWWIEKFSNL--TELSMNSCSRLKCVFLHMSKLKHL 891



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 82/190 (43%), Gaps = 35/190 (18%)

Query: 407 LRTLPSNFKPKNLVELNLRCSKVE---QPWEGEKACVP---------------------- 441
           +   PSN   +NLVE   R SK E   + WE EK   P                      
Sbjct: 731 IEDFPSNLHLENLVEF--RISKEESDEKQWEEEKPLTPFLAMMLSPTLTSLHLENLPSLV 788

Query: 442 ---SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLY 498
              SS QN   L  L    C +L + P+ ++      + FS C  L  FP+IS  ++ LY
Sbjct: 789 ELTSSFQNLNQLKDLIIINCINLETLPTGINLQSLDYLCFSGCSQLRSFPEISTNISVLY 848

Query: 499 LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC-----LNLE 553
           L ++AIEEVP  IE  ++L  L +  C RLK +     KL+ L   +   C     + L 
Sbjct: 849 LDETAIEEVPWWIEKFSNLTELSMNSCSRLKCVFLHMSKLKHLKEALFRNCGTLTRVELS 908

Query: 554 HFPEILEKME 563
            +P  +E M+
Sbjct: 909 GYPSGMEVMK 918



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 187/433 (43%), Gaps = 113/433 (26%)

Query: 547 LGCLNLEHFPEILEKME----HLKRIYSDRTPITEL-------PSSFENLP------GLE 589
           + C+     PE L K+E     L +++    P+T L        S+ + +P       LE
Sbjct: 595 MRCMPFGFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLE 654

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
           +L ++ C  L  LP +I +L  L  + +    ++  LP+   L ++ R L+  HC  L++
Sbjct: 655 ILNLKFCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNLKSLDR-LNLYHCSKLKT 713

Query: 649 FPRTFLLGLSAMGL-----------LHISDYAVREIPQE-------------IAYLSSLE 684
           FP+ F   +S + L           LH+ +     I +E               +L+ + 
Sbjct: 714 FPK-FSTNISVLNLNLTNIEDFPSNLHLENLVEFRISKEESDEKQWEEEKPLTPFLAMML 772

Query: 685 ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
              L+  + E+LP++++  S  +       N+ Q        LK L +I+C  L++LP  
Sbjct: 773 SPTLTSLHLENLPSLVELTSSFQ-------NLNQ--------LKDLIIINCINLETLPT- 816

Query: 745 PFCLESLD---LTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQL------LTV 795
              L+SLD    +GC+ LRS PE+   +  L L++     ++ E+P  ++       L++
Sbjct: 817 GINLQSLDYLCFSGCSQLRSFPEISTNISVLYLDET----AIEEVPWWIEKFSNLTELSM 872

Query: 796 RNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNC-----LK 850
            +C+RL+    + L + +L         KH          LK A     F NC     ++
Sbjct: 873 NSCSRLKC---VFLHMSKL---------KH----------LKEAL----FRNCGTLTRVE 906

Query: 851 LNG--------KANN-KILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSE 901
           L+G        KA+N    + SL ++    +    L  E  ++ + S +   ++     E
Sbjct: 907 LSGYPSGMEVMKADNIDTASSSLPKVVLSFLDCFNLDPETVLHHQESIIFNYMLFTGKEE 966

Query: 902 IPDWFSNQSSGSS 914
           +P +F+ +++GSS
Sbjct: 967 VPSYFTYRTTGSS 979


>gi|311992493|gb|ABR67409.2| TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]
          Length = 947

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 245/807 (30%), Positives = 359/807 (44%), Gaps = 178/807 (22%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVA----GP 75
           KTTLAKA++++ + +FEG CF+S+VR  S+   GL  LQ+ +L   L+  L+V     G 
Sbjct: 242 KTTLAKALYNKIASQFEGCCFLSNVREASKQFNGLAQLQESLLYEILTIYLKVVNFDRGI 301

Query: 76  NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGE 135
           NI    + R+   K+LIVLDDV+++ QL+ L+G  D FGQGSRI+VTTR+K +L     +
Sbjct: 302 NI---IRNRLCSKKVLIVLDDVDKLEQLEALVGGRDWFGQGSRIIVTTRNKHLLSSHGFD 358

Query: 136 EKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
           E  I+ + GL  E+A E F   AFK+NH   +    S+   SY +G+PL L VLGS LC 
Sbjct: 359 E--IHNILGLNEEKAIELFSWHAFKKNHPSSNYLNLSKRATSYCRGHPLALVVLGSFLCT 416

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           + +  W  +L +      S   DI DIL++SF+ L                 EDK     
Sbjct: 417 RDQVEWCSILDEFE---NSLNKDIKDILQLSFDGL-----------------EDK----- 451

Query: 256 ILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                                             MG +IV  ES  E GKRSRLW  +++
Sbjct: 452 ----------------------------------MGHKIVCGES-LELGKRSRLWLVQDV 476

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
             VL +N GTDA++ I LD      +++D +AF  M NLRL                   
Sbjct: 477 WDVLVNNSGTDAVKAIKLDFPNPTKLDVDLQAFRKMKNLRL------------------- 517

Query: 376 EEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
              L     +    ++YLP  L+++ W  +P  TLPS F  KNLV L+L+ S ++   + 
Sbjct: 518 ---LIVQNARFCTKIEYLPDSLKWIKWHGFPQSTLPSCFITKNLVGLDLQHSFIKTFEKR 574

Query: 436 EKAC---------------------------------------VPSSIQNFKYLSALSFK 456
            K C                                       +  S+ +   L  L+  
Sbjct: 575 LKDCERLKHVDLSYSTLLEQIPDFSAASNLGELYLINCTNLGMIDKSLFSLNNLIVLNLD 634

Query: 457 GCQSLRSFPSNLHFVCPVT-INFSYCVNLIEFPQISG--KVTRLYLGQ-SAIEEVPSSIE 512
           GC +L+ FP     +  +  +  SYC  L + P +S    + RLYL + + +  +  S+ 
Sbjct: 635 GCSNLKKFPRGYFMLSSLKELRLSYCKKLEKIPDLSAASNLERLYLQECTNLRLIHESVG 694

Query: 513 CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR 572
            L  L+ LDLR C  L ++  S  +L+SL  L L  C  LE FP I E M+ L+ +  D 
Sbjct: 695 SLDKLDHLDLRQCTNLSKLP-SHLRLKSLQNLELSRCCKLESFPTIDENMKSLRHLDLDF 753

Query: 573 TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNI------------GSLEYLYYILAAAS 620
           T I ELPSS   L  L  L +  C+ L +LP+ I            G   +  +      
Sbjct: 754 TAIKELPSSIGYLTELCTLNLTSCTNLISLPNTIYLLRNLDELLLSGCSRFRIFPHKWDR 813

Query: 621 AISQLPSSVAL-SNMLRSLDSSH--CKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI 677
           +I  + S   +      SL+  H        F    LL L +    +IS+    EI  ++
Sbjct: 814 SIQPVCSPTKMIETTSWSLEFPHLLVPNESLFSHFTLLDLKSC---NISNAKFLEILCDV 870

Query: 678 A-YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCK 736
           A +LS L    LS N F SLP+ + +                      + L  L L +CK
Sbjct: 871 APFLSDLR---LSENKFSSLPSCLHKF---------------------MSLWNLELKNCK 906

Query: 737 MLQSLPVLPFCLESLDLTGCNMLRSLP 763
            LQ +P LP  ++ +D +GC  L   P
Sbjct: 907 FLQEIPNLPKNIQKMDASGCESLVRSP 933


>gi|297837527|ref|XP_002886645.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332486|gb|EFH62904.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1037

 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 191/608 (31%), Positives = 308/608 (50%), Gaps = 93/608 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-----LQ 58
           +D    +GI G GGIGKTT+A+A+++Q S  F    F+ +V+G+       EH     LQ
Sbjct: 205 TDEAMTLGISGPGGIGKTTIARALYNQISRNFPLRYFMENVKGSYRNIDCDEHGSKLRLQ 264

Query: 59  KQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +Q+LS  L+   +++   ++ +   ER+R  K+LI+LDDV+ + QL  L  ++ +FG GS
Sbjct: 265 EQLLSQILNHNGVKICNLDVIY---ERLRCQKVLIILDDVDSLEQLDALAKDIYRFGHGS 321

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+VTT+D+ +L+++       Y V     EEA E FC +AF+ +         +  V  
Sbjct: 322 RIIVTTKDQELLQRYGI--NNTYHVGFPSNEEALEIFCRYAFRRSSPLYGFEKLAIRVTE 379

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                PL L V+GSSL  K +  W KV+  +NR+  S   D+  +L++ ++ L  + +++
Sbjct: 380 LCSNLPLGLRVVGSSLRGKCEDEW-KVI--MNRLETSLDGDLERVLRVGYDSLHEKDQAL 436

Query: 238 FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF-LNMHDILQEMGRQ 293
           FL IA FF  +D+D+V +IL +   DV   L  L+++SL+ IS N  + MH +LQ+MGRQ
Sbjct: 437 FLHIAIFFNYKDEDYVKAILGEDNLDVEHGLRNLVNRSLIDISTNGDIVMHKLLQQMGRQ 496

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
            + ++   EP KR  L D  EI  VL+++ GT  + GI  D S I  + +   AF  M N
Sbjct: 497 AIHRQ---EPWKRQILIDAHEICDVLEYDTGTRTVAGISFDASNISKVFVSEGAFKRMRN 553

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           L+                S+S E      ++ +P  L + P +L+ LHW+ YP ++LP  
Sbjct: 554 LQFL--------------SVSDEN----DRICIPEDLQF-PPRLKLLHWEAYPRKSLPIR 594

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKAC---------------------------------- 439
           F  +NLVEL+++ S++E+ W+G +                                    
Sbjct: 595 FYLENLVELDMQNSQLEKLWKGPQLLTNLKKMDLSMSRHLKELPDLSNATNLKRLNLDDC 654

Query: 440 -----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
                +PSS  N   L  LS   C  L   P+ ++     ++N + C  L  FP IS  +
Sbjct: 655 ESLVEIPSSFSNLHKLKVLSMFACTKLEVIPTRMNLASLESVNMTACQRLKNFPDISRNI 714

Query: 495 TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSL------VTLILLG 548
            +L +  +A+E+VP+SI   + L VL++        I TS  KL++L      V  ++L 
Sbjct: 715 LQLSISLTAVEQVPASIRLWSRLRVLNI--------IITSNGKLKALTHVPQSVRHLILS 766

Query: 549 CLNLEHFP 556
              +E  P
Sbjct: 767 YTGVERIP 774



 Score = 43.9 bits (102), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 119/303 (39%), Gaps = 88/303 (29%)

Query: 434 EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
           E ++ C+P  +Q    L  L ++      ++P        + I F Y  NL+E    + +
Sbjct: 562 ENDRICIPEDLQFPPRLKLLHWE------AYPRK-----SLPIRF-YLENLVELDMQNSQ 609

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           + +L+ G           + LT+L+ +DL   + LK       +L  L     L  LNL+
Sbjct: 610 LEKLWKGP----------QLLTNLKKMDLSMSRHLK-------ELPDLSNATNLKRLNLD 652

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLEY 611
                            D   + E+PSSF NL  L+VL +  C+KL+ +P   N+ SLE 
Sbjct: 653 -----------------DCESLVEIPSSFSNLHKLKVLSMFACTKLEVIPTRMNLASLE- 694

Query: 612 LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP---RTFLLGLSAMGLLHISDY 668
                                    S++ + C+ L++FP   R  L        L IS  
Sbjct: 695 -------------------------SVNMTACQRLKNFPDISRNIL-------QLSISLT 722

Query: 669 AVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLK 728
           AV ++P  I   S L +L +   +   L A+      +R + L        +  +P C K
Sbjct: 723 AVEQVPASIRLWSRLRVLNIIITSNGKLKALTHVPQSVRHLILS----YTGVERIPYCKK 778

Query: 729 YLH 731
            LH
Sbjct: 779 SLH 781


>gi|357469545|ref|XP_003605057.1| TMV resistance protein N [Medicago truncatula]
 gi|355506112|gb|AES87254.1| TMV resistance protein N [Medicago truncatula]
          Length = 1626

 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 196/617 (31%), Positives = 302/617 (48%), Gaps = 105/617 (17%)

Query: 8    QIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML----- 62
            Q++GIWGMGGIGKTTLAKA++++  H+F+   F+ +VR   +       LQ+++L     
Sbjct: 718  QLLGIWGMGGIGKTTLAKAVYNKIRHDFDAKSFLFNVRDVWKVDDDKVSLQQRLLFDICK 777

Query: 63   STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
            +T +      +G  I    +ER+   K+ +V+DDVN++ QL  L G+   FG+GSRI++T
Sbjct: 778  TTKIKIDSVESGKKI---LQERLCSKKIFLVIDDVNKLDQLNALCGDRKWFGKGSRILIT 834

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            TRD  +L +   E   +YR+  ++  E+ E F   AFK++   E     SR VV Y+ G 
Sbjct: 835  TRDDDLLSRL--EVDHVYRMKEMDSSESLELFNWHAFKQSTSREGFTNISRDVVKYSGGL 892

Query: 183  PLVLEVLGSSLCLKR-KSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSIFLD 240
            PL L+V+GS L  K+ K+ W  VL  L  I  +E   + + L+ISF+ L+   VK IFLD
Sbjct: 893  PLALQVIGSFLSTKKIKAEWKDVLEKLKLIPNNE---VLEKLRISFDGLSDDDVKDIFLD 949

Query: 241  IACFFEGEDKDFVASILDD-SESDVLDI--LIDKSLVSIS-GNFLNMHDILQEMGRQIVR 296
            IA FF G D++ V  IL D     V+ I  L+ +SLV++   N + MHD+L++MGR+IVR
Sbjct: 950  IAFFFIGMDREDVTKILQDCGHFSVIGISVLVQQSLVTVDRKNKIGMHDLLRDMGREIVR 1009

Query: 297  QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGIN-LDPRAFTNMSNLR 355
            + S+    + SRLW  +++ + L  +  + A++G+ L +S++     L+ +AF  M  LR
Sbjct: 1010 KISKDADKEPSRLWHYEDVHK-LPIDTSSLAVKGLSLKMSRMDSTTYLETKAFEKMDKLR 1068

Query: 356  LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
              +                         +QL     YL + LR+L W  +PL+ +P++F 
Sbjct: 1069 FLQLV----------------------GIQLNGDYKYLSRHLRWLSWHGFPLKYIPADFH 1106

Query: 416  PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY---------------LSALSFKGCQS 460
               LV + L+ S +E+ W   +  V   I N  +               L  L  K C S
Sbjct: 1107 QDTLVAVVLKYSNLERVWRKSQFLVKLKILNLSHSHNLRHTPDFSKLPNLEKLILKDCPS 1166

Query: 461  LRSFPSNL-HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEV 519
            L S  SN+ H    + IN   C  L E P+                              
Sbjct: 1167 LSSVSSNIGHLKKILLINLKDCTGLRELPR------------------------------ 1196

Query: 520  LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP 579
                          S  KL SL TLIL GC  ++   E +E+M+ L  + +D T IT +P
Sbjct: 1197 --------------SIYKLDSLKTLILSGCTKIDKLEEDIEQMKSLTTLVADDTAITRVP 1242

Query: 580  SSFENLPGLEVLFVEDC 596
              F  +    + F+  C
Sbjct: 1243 --FAVVRSKSIAFISLC 1257



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 158/308 (51%), Gaps = 18/308 (5%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG-GLEHLQKQ 60
           + ++   IVGIWGM G+GKT +AKA ++Q S  F+    + +V    ++   GL   Q+Q
Sbjct: 211 EQAENTMIVGIWGMAGVGKTIIAKATYNQMSFTFDCKSILKNVNETCKSGDDGLVSFQRQ 270

Query: 61  ML-----STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           +L     +T +      +G  I    +  +   K+ +VLD VN++ QL  L G+ D FG 
Sbjct: 271 LLLDICKTTKIHIDTVESGKKI---LQRSLCHKKVFLVLDGVNKLEQLNALCGDRDWFGH 327

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           GSRIV+TT DK +L   + +   +YR+  ++  E+ + F   AF+     E      R V
Sbjct: 328 GSRIVITTSDKHILRNLQLDH--VYRMKYMDNTESLKLFSWHAFRTPSPKESYADLCRDV 385

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           V Y  G P+ LE+LGS L  +    W   L     I   +I      L+ + + L    +
Sbjct: 386 VEYCGGLPVALEILGSYLFDRSVQEWKIALQKFKTILPYQIE---KKLRKNLDVLDHDNQ 442

Query: 236 SIFLDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISG-NFLNMHDILQEMG 291
            +FL IA  F G  KD V   L+ S       + IL DKSL++I G N + MH +L+ MG
Sbjct: 443 DVFLKIATLFIGMHKDDVIQTLNYSGHFPEIAISILEDKSLLTIDGNNRIGMHTLLRAMG 502

Query: 292 RQIVRQES 299
           R+I+RQ+S
Sbjct: 503 REIIRQQS 510



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 34/195 (17%)

Query: 446  NFKYLSA----LSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ 501
            ++KYLS     LS+ G   L+  P++ H    V +   Y                     
Sbjct: 1080 DYKYLSRHLRWLSWHGF-PLKYIPADFHQDTLVAVVLKY--------------------- 1117

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S +E V    + L  L++L+L     L R +  F KL +L  LIL  C +L     +   
Sbjct: 1118 SNLERVWRKSQFLVKLKILNLSHSHNL-RHTPDFSKLPNLEKLILKDCPSL---SSVSSN 1173

Query: 562  MEHLKRIY----SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILA 617
            + HLK+I      D T + ELP S   L  L+ L +  C+K+D L ++I  ++ L  ++A
Sbjct: 1174 IGHLKKILLINLKDCTGLRELPRSIYKLDSLKTLILSGCTKIDKLEEDIEQMKSLTTLVA 1233

Query: 618  AASAISQLPSSVALS 632
              +AI+++P +V  S
Sbjct: 1234 DDTAITRVPFAVVRS 1248


>gi|449530355|ref|XP_004172161.1| PREDICTED: TMV resistance protein N-like, partial [Cucumis sativus]
          Length = 987

 Score =  259 bits (663), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 233/762 (30%), Positives = 369/762 (48%), Gaps = 94/762 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG-NSETAGGLEHLQK 59
           + ++ +  ++GI+GM GIGKTTL+KA+F+ F H F    F+ ++   ++ +  GL  LQ+
Sbjct: 44  ISTNHSTLVLGIYGMSGIGKTTLSKALFNHFFHFFNSRSFLPNINSLSTSSPDGLLRLQQ 103

Query: 60  QMLS-----TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRL-IGELDQF 113
            +LS     T L  +      +     +ER++  K+L+VLDD++ + Q   L I +   F
Sbjct: 104 TLLSDLLIATNLRSRSSTTTDSTVVRMQERLQNKKVLVVLDDLDRIEQANALAIRDRRWF 163

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSR 173
           G GSRI++TTR+K++L+  + +E      N L  EE+ E F   AF+E + PE+L   S+
Sbjct: 164 GDGSRIIITTRNKQILDTLKVDEVYNMESNLLNDEESLELFSYHAFREQNPPEELLECSK 223

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKR-KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
           S+VSY    PL LE+LG S    R    W   +  L RI      D+ + L+I F  L  
Sbjct: 224 SIVSYCGSLPLALEILGGSFFGGRPMEEWRSAMERLKRI---PAWDLQEKLRIGFEGLRD 280

Query: 233 RV-KSIFLDIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSI---SGNFLNMH 284
            + + IFLD+ C+F G  ++ V  I+D      ES  L  L  + LV +   SG  L MH
Sbjct: 281 EMEREIFLDVCCYFVGMKEELVVKIMDGCGMYGESG-LRGLKWRCLVGVEFWSGR-LKMH 338

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLD 344
           D++++MGR+IVRQ   KEP +RSR+W   E  ++L H  G++ IEG+ +D+   KG N +
Sbjct: 339 DLVRDMGREIVRQTCVKEPARRSRVWLYHEALKILLHQNGSENIEGLAIDMG--KGNNKE 396

Query: 345 P---RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLH 401
                AF  M NLRL K                    L+Y  +   N    + K+LR++ 
Sbjct: 397 KFRLEAFGKMRNLRLLK--------------------LNYVHLIGSNFEHIISKELRWIC 436

Query: 402 WDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSL 461
           W  +PL+++PS+F   NLV +++R S +  PW    +      Q  + L  L+    + L
Sbjct: 437 WHGFPLKSIPSSFYQGNLVAIDMRYSSLIHPWTWRDS------QILENLKVLNLSHSEKL 490

Query: 462 RSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLD 521
           +  P           NF+   NL    Q+  K        +A+  +  SI  L  L +++
Sbjct: 491 KKSP-----------NFTKLPNL---EQLKLK------NCTALSSLHPSIGQLCKLHLIN 530

Query: 522 LRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
           L+ C  L  + TS   L SL T I+ GC  +    + L  +E L  + +DRT I+ +P S
Sbjct: 531 LQNCTNLSSLPTSIYNLHSLQTFIISGCSKIHCLHDDLGHLESLTTLLADRTAISHIPFS 590

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
              L  L  L +  C    N     GS   L + L + +      +  AL     +L SS
Sbjct: 591 IVKLKKLTDLSLCGC----NCRSGSGSSASLPWRLVSWALPRPNQTCTAL-----TLPSS 641

Query: 642 HCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN-NFESLPAII 700
                       L GLS++  L + +  +  +P +I  LS L+ L L GN N   L   +
Sbjct: 642 ------------LQGLSSLTELSLQNCNLESLPIDIGSLSELKKLNLGGNKNLRVLGTEL 689

Query: 701 KQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
             + +L  +++E+   L+ + E P  ++     +CK L   P
Sbjct: 690 CGLLKLNELNVENCGRLEFIQEFPKNMRSFCATNCKSLVRTP 731



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 10/264 (3%)

Query: 512 ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YS 570
           + L +L+VL+L   ++LK+ S +F KL +L  L L  C  L      + ++  L  I   
Sbjct: 474 QILENLKVLNLSHSEKLKK-SPNFTKLPNLEQLKLKNCTALSSLHPSIGQLCKLHLINLQ 532

Query: 571 DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA 630
           + T ++ LP+S  NL  L+   +  CSK+  L D++G LE L  +LA  +AIS +P S+ 
Sbjct: 533 NCTNLSSLPTSIYNLHSLQTFIISGCSKIHCLHDDLGHLESLTTLLADRTAISHIPFSIV 592

Query: 631 LSNMLR--SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR-EIPQEIAYLSSLEILY 687
               L   SL   +C+       +    L +  L   +       +P  +  LSSL  L 
Sbjct: 593 KLKKLTDLSLCGCNCRSGSGSSASLPWRLVSWALPRPNQTCTALTLPSSLQGLSSLTELS 652

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC----LKYLHLIDCKMLQSLPV 743
           L   N ESLP  I  +S+L+ ++L     L+ L    LC    L  L++ +C  L+ +  
Sbjct: 653 LQNCNLESLPIDIGSLSELKKLNLGGNKNLRVLGT-ELCGLLKLNELNVENCGRLEFIQE 711

Query: 744 LPFCLESLDLTGCNMLRSLPELPL 767
            P  + S   T C  L   P++ +
Sbjct: 712 FPKNMRSFCATNCKSLVRTPDVSM 735


>gi|357456781|ref|XP_003598671.1| Resistance protein [Medicago truncatula]
 gi|355487719|gb|AES68922.1| Resistance protein [Medicago truncatula]
          Length = 1158

 Score =  259 bits (663), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 234/755 (30%), Positives = 348/755 (46%), Gaps = 107/755 (14%)

Query: 1   MDSSD-TVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQK 59
           M  SD  V ++GI G+ GIGKTTLA+A++D    +FEG CF+ +VR  S T  GL +LQ+
Sbjct: 303 MQMSDPNVVMIGICGVAGIGKTTLARAVYDSIGQQFEGLCFLCNVREYS-TKYGLAYLQQ 361

Query: 60  QMLSTTLSEKL----EVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
            +LS  + E +    E+ G +I      +++  ++L++LDDV+++ QLK L G    FG 
Sbjct: 362 VILSDMVGENINLRNEIDGISI---LIRKLQSKRILLILDDVDKLDQLKNLAGAPSWFGC 418

Query: 116 GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
           GSRI++TTR K +L         IY V   ++ EA  HF +    +   PE + W     
Sbjct: 419 GSRIIITTRHKDILAAH--GVGNIYDVPIFDYHEAL-HFLSAVASKIPNPEGV-WD--RA 472

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           +SY +G PLVL+V+ S L  K    W   L    ++       I++   +S+N L    K
Sbjct: 473 ISYARGLPLVLKVIASDLFEKSTDEWEISLDRYEKVRNEGTQSIFE---VSYNSLNECEK 529

Query: 236 SIFLDIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSI--SGNFLNMHDILQEM 290
            IF+DIACFF  E   +V  IL           D L D+SL+SI  SG  L +HD +  M
Sbjct: 530 RIFIDIACFFNRETFSYVKEILSACGFYTKYGFDRLKDRSLISITPSGRLL-VHDHIIGM 588

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLD-LSKIKGINLDPRAFT 349
              IV QES   P KRSRLW P+++ +VL  N G D  E + LD L + +   L  +AF 
Sbjct: 589 AMNIVHQESPMNPCKRSRLWLPEDVLQVLDENAGNDKTEVMILDNLPQGEVEKLSDKAFK 648

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
            M +LR+       + E+                      L +LP  LR L+W  YP   
Sbjct: 649 EMKSLRILIINDAIYSEV----------------------LQHLPNSLRVLYWSGYPSWC 686

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLH 469
           LP +F     V L  +C             + +  +N + L ++ F  C  LR  P    
Sbjct: 687 LPPDF-----VNLPSKC------------LIFNKFKNMRSLVSIDFTDCMFLREVPDMSA 729

Query: 470 FVCPVTINFSYCVNLIEFPQISGKVTRL----YLGQSAIEEVPSSIECLTDLEVLDLRGC 525
               +T+    C+N+ +     G +  L      G +++E +P + E L+ L VL    C
Sbjct: 730 APNLMTLYLDNCINITKIHDSVGFLDNLEELTATGCTSLETIPVAFE-LSSLRVLSFSEC 788

Query: 526 KRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL 585
            +L R     CK+                        E+L+ I   +T I ELP S  N+
Sbjct: 789 SKLTRFPEILCKI------------------------ENLQHINLCQTAIEELPFSIGNV 824

Query: 586 PGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKG 645
            GLEVL + DC++LD LP +I +L  L  I A +     + +     N    L+ + C  
Sbjct: 825 TGLEVLTLMDCTRLDKLPSSIFTLPRLQEIQADSCKGFGISTEFEEDN--GPLNFTVC-- 880

Query: 646 LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQ 705
               P    L LS+  L   +D  +       A +  L+I Y   +NF  LP  IKQ   
Sbjct: 881 ----PNKIHLHLSSCNL---TDEHLFICLSGFANVVHLDISY---SNFTVLPPCIKQCIN 930

Query: 706 LRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
           L+ + L +   LQ +  +P  L+ +   +C  L S
Sbjct: 931 LKALVLTNCMQLQEISAIPQNLREIDASNCTSLTS 965



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 106/469 (22%), Positives = 185/469 (39%), Gaps = 99/469 (21%)

Query: 486  EFPQISGKVTRLYLGQSAIEEVPSSI-ECLTDLEVLDLRGCKRLKRIS-TSFCKLRSLVT 543
            E P    K +RL+L +  ++ +  +     T++ +LD      ++++S  +F +++SL  
Sbjct: 596  ESPMNPCKRSRLWLPEDVLQVLDENAGNDKTEVMILDNLPQGEVEKLSDKAFKEMKSLRI 655

Query: 544  LILLGCLNLEHFPEILEKMEH-LKRIYSDRTPITELPSSFENLPGLEVLF---------- 592
            LI+    N   + E+L+ + + L+ +Y    P   LP  F NLP   ++F          
Sbjct: 656  LII----NDAIYSEVLQHLPNSLRVLYWSGYPSWCLPPDFVNLPSKCLIFNKFKNMRSLV 711

Query: 593  ---VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
                 DC  L  +PD   +   +   L     I+++  SV   + L  L ++ C  LE+ 
Sbjct: 712  SIDFTDCMFLREVPDMSAAPNLMTLYLDNCINITKIHDSVGFLDNLEELTATGCTSLETI 771

Query: 650  PRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
            P  F   LS++ +L  S+ + +   P+ +  + +L+ + L     E LP  I  ++ L  
Sbjct: 772  PVAF--ELSSLRVLSFSECSKLTRFPEILCKIENLQHINLCQTAIEELPFSIGNVTGLEV 829

Query: 709  IHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPV----------LPFCL----ESLDLT 754
            + L D   L  LP     L  L  I     +   +          L F +      L L+
Sbjct: 830  LTLMDCTRLDKLPSSIFTLPRLQEIQADSCKGFGISTEFEEDNGPLNFTVCPNKIHLHLS 889

Query: 755  GCNMLRSLPELPLCLQ------YLNLEDCNMLRSLPELPLCLQL--LTVRNCNRLQSLPE 806
             CN+      L +CL       +L++   N     P +  C+ L  L + NC +LQ +  
Sbjct: 890  SCNLTDE--HLFICLSGFANVVHLDISYSNFTVLPPCIKQCINLKALVLTNCMQLQEISA 947

Query: 807  ILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLR 866
            I   L+E+DAS                             NC  L  ++ + +L+     
Sbjct: 948  IPQNLREIDAS-----------------------------NCTSLTSQSQSVLLS----- 973

Query: 867  IRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSI 915
                              +   E     ++LPGS IP+WF + SS  SI
Sbjct: 974  ------------------QAYHETGEKTVMLPGSSIPEWFDHSSSERSI 1004


>gi|297837791|ref|XP_002886777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332618|gb|EFH63036.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1023

 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 212/654 (32%), Positives = 318/654 (48%), Gaps = 94/654 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAGG 53
           S+ V++VGIWG  GIGKTT+A+A+F++ +  F GS F+             + N +    
Sbjct: 208 SEEVRMVGIWGPSGIGKTTIARALFNRLARHFRGSIFIDRSFLCKSTKIYSKANPDDYNM 267

Query: 54  LEHLQKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
             HLQ   L   L +K       I H    +ER++  K+LI+LDD+++   L  L+G+  
Sbjct: 268 RLHLQSNFLPEILGQK----HIRIDHLGAVRERLKHQKVLILLDDLDDQVVLDTLVGQTQ 323

Query: 112 QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEE-AFEHFCNFAFKENHCPEDLNW 170
            FG+GSRI+V T++K +L   R      +   GL  ++ A E F  +AF++N CP     
Sbjct: 324 WFGRGSRIIVITKNKHLL---RAHGICSFYEVGLPSDQLALEMFSRYAFRQN-CPLPGFI 379

Query: 171 HSRSVVSYTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNK 229
                V+   GN PL L +LGS L  + K  W   +H L+R+ +     I + L++ +  
Sbjct: 380 EFSVEVAKLVGNLPLGLNILGSYLRGRIKEDW---IHRLHRLRKGLNKQIEEALRVEYEG 436

Query: 230 LTPRV-KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHD 285
           L  R  K+IF  IAC F   + + +  +L+DS+ DV   L  L+D SL+      + MH 
Sbjct: 437 LGSRKDKAIFRHIACLFNEVEINDIKLLLEDSDLDVITGLHNLLDNSLIHERRKTVQMHC 496

Query: 286 ILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDP 345
           ++QEMG+++VR +S K P KR  L D K+I  VL  N   + ++GI  +L+ +  +++  
Sbjct: 497 LVQEMGKEMVRIQS-KNPAKREFLVDSKDIYDVLNGNANAEKVKGISWNLADLDELHIHK 555

Query: 346 RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
           RAF  M NL   + Y           ++  +E+L +     P GLDYLP KLR+L WD Y
Sbjct: 556 RAFERMKNLDFIRIYDDSL-------ALHIQEKLHF-----PQGLDYLPPKLRFLSWDGY 603

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK---------------------------- 437
           P+R LPSNF P++LV L +R SK+E+ W G                              
Sbjct: 604 PMRCLPSNFLPEHLVVLRMRNSKLEKLWNGVHLPRLLEDMDMEGSSNLTELPDLSWAPNL 663

Query: 438 -----------ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIE 486
                      A +PSSI N   L  L+ + C SL S P N+  +    ++ S C     
Sbjct: 664 TTLNLRNCPSLAEIPSSIMNLHCLKTLTLEDCTSLVSLPVNIDLISLYRLDLSGCSRFSR 723

Query: 487 FPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLIL 546
           FP IS  ++ L L Q+AIEEVP  I     L  +++  C +LK IS +  +L+ L     
Sbjct: 724 FPDISRNISFLILNQTAIEEVPWWINKFPKLICIEMWECTKLKYISGNISELKLLEKADF 783

Query: 547 LGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
             C       E L K       +  RT +  + +   N   L VL   +C KLD
Sbjct: 784 SNC-------EALTKAS-----WIGRTTVVAMVAE-NNHTKLPVLNFINCFKLD 824



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 129/296 (43%), Gaps = 65/296 (21%)

Query: 705 QLRFIHLEDFNMLQSLPE--LPLCLKYLHLIDCKM--LQSLPVLPFCLESLDLTGCNMLR 760
           +LRF+  + + M + LP   LP  L  L + + K+  L +   LP  LE +D+ G + L 
Sbjct: 594 KLRFLSWDGYPM-RCLPSNFLPEHLVVLRMRNSKLEKLWNGVHLPRLLEDMDMEGSSNLT 652

Query: 761 SLPELPLC--LQYLNLEDCNMLRSLPELPL---CLQLLTVRNCNRLQSLPE--ILLCLQE 813
            LP+L     L  LNL +C  L  +P   +   CL+ LT+ +C  L SLP    L+ L  
Sbjct: 653 ELPDLSWAPNLTTLNLRNCPSLAEIPSSIMNLHCLKTLTLEDCTSLVSLPVNIDLISLYR 712

Query: 814 LDASVLEKLSKHSPDL----------QWAPESLK------SAAICFEFTNCLKLNGKANN 857
           LD S   + S+  PD+          Q A E +          IC E   C KL   + N
Sbjct: 713 LDLSGCSRFSRF-PDISRNISFLILNQTAIEEVPWWINKFPKLICIEMWECTKLKYISGN 771

Query: 858 ----KIL-------------ADSLLRIRHMAIAS---------------LRLGYEMAINE 885
               K+L             A  + R   +A+ +                +L  E  I +
Sbjct: 772 ISELKLLEKADFSNCEALTKASWIGRTTVVAMVAENNHTKLPVLNFINCFKLDQETLIQQ 831

Query: 886 KLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKK 941
            + +     ++LPG ++P +F+NQ++G+S+ I L   S  +  + F  C V+D+ K
Sbjct: 832 SVFKH----LILPGEKVPSYFTNQATGNSLVIHLLQSSFSQEFLRFRVCLVVDADK 883


>gi|15230461|ref|NP_190049.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|30692207|ref|NP_850654.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6967111|emb|CAB72465.1| disease resistance protein homolog [Arabidopsis thaliana]
 gi|28973753|gb|AAO64192.1| putative disease resistance protein homolog [Arabidopsis thaliana]
 gi|332644404|gb|AEE77925.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644405|gb|AEE77926.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1214

 Score =  259 bits (661), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 271/972 (27%), Positives = 418/972 (43%), Gaps = 202/972 (20%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQ 58
            D V+I+GIWG  GIGKTT+A+ + +Q S  F+ S  + +++G        E +  L+ LQ
Sbjct: 287  DEVRIIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQ-LQ 345

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
             QMLS  ++ K       I H    +ER+R  K+ +VLD+V+++GQL  L  E   FG G
Sbjct: 346  NQMLSQMINHK----DIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPG 401

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SRI++TT D  VL K  G    +Y+V     +EAF+ FC  AF +    E  +  +  V 
Sbjct: 402  SRIIITTEDLGVL-KAHG-INHVYKVEYPSNDEAFQIFCMNAFGQKQPHEGFDEIAWEVK 459

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            +     PL L+VLGS+L  K K  W + L  L    + +I     I++ S++ L    K 
Sbjct: 460  ALAGKLPLGLKVLGSALRGKSKPEWERTLPRLRTSLDGKIG---GIIQFSYDALCDEDKY 516

Query: 237  IFLDIACFFEGED----KDFVASILDDSESDVLDILIDKSLVSI---------------- 276
            +FL IAC F GE     K+ +   LD  +   L +L  KSL+S                 
Sbjct: 517  LFLYIACLFNGESTTKVKELLGKFLDVRQG--LHVLAQKSLISFDEEISWKQIVQVLLLN 574

Query: 277  -----------SGNFLNMHDILQEMGRQIVRQE-SEKEPGKRSRLWDPKEISRVLKHNKG 324
                           + MH +L++ GR+  R++       K   L   ++I  VL  +  
Sbjct: 575  KFSHVRHTKRNKSQIIRMHTLLEQFGRETSRKQFVHHRYTKHQLLVGERDICEVLDDDTT 634

Query: 325  TDAIEGIFLDLSKIKGINLD---PRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSY 381
                     D  +  GINLD        N+S   L + +  +F +I  + +   E     
Sbjct: 635  ---------DNRRFIGINLDLYKNEEELNISEKALERIHDFQFVKINYVFTHQPE----- 680

Query: 382  SKVQLP-NGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKAC- 439
             +VQL    L Y   ++R L W  Y    LPS F P+ LVEL++RCSK+ + WEG K   
Sbjct: 681  -RVQLALEDLIYHSPRIRSLKWFPYQNICLPSTFNPEFLVELDMRCSKLRKLWEGTKQLR 739

Query: 440  ---------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNL 484
                           +PSSI+    L  L  + C SL   P +++      ++ + C  +
Sbjct: 740  NLKWMDLSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSINANNLQGLSLTNCSRV 799

Query: 485  IEFPQISGKVTRLYLGQ----SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS 540
            ++ P I   VT L+  +    S++ E+P SI    +L  LD+RGC  L ++ +S   + +
Sbjct: 800  VKLPAIEN-VTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCSSLVKLPSSIGDMTN 858

Query: 541  LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
            L    L  C NL                        ELPSS  NL  L +L +  CSKL+
Sbjct: 859  LKEFDLSNCSNL-----------------------VELPSSIGNLQKLFMLRMRGCSKLE 895

Query: 601  NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAM 660
             LP NI  +                         LR LD + C  L+SFP       + +
Sbjct: 896  TLPTNINLIS------------------------LRILDLTDCSQLKSFPEIS----THI 927

Query: 661  GLLHISDYAVREIPQEIAYLSSLEI---------------------LYLSGNNFESLPAI 699
              L +   A++E+P  I   S L +                     L L   + + +P  
Sbjct: 928  SELRLKGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPHALDIITDLLLVSEDIQEVPPW 987

Query: 700  IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP----------VLPFCL- 748
            +K+MS+LR + L + N L SLP+LP  L Y++  +CK L+ L             P C  
Sbjct: 988  VKRMSRLRALRLNNCNSLVSLPQLPDSLDYIYADNCKSLERLDCCFNNPEIRLYFPKCFK 1047

Query: 749  ---ESLDL---TGCNMLRSLP--ELPLCLQY---------LNLEDCNMLRSLPELPLCLQ 791
               E+ DL   T       LP  ++P C  +         + L++ ++  +L     C+ 
Sbjct: 1048 LNQEARDLIMHTSTRKYAMLPSIQVPACFNHRATSGDYLKIKLKESSLPTTL-RFKACIM 1106

Query: 792  LLTVRNCNRLQSL-PEILLCLQE--------LDASVLEKLSKHSPDLQWAPESLKSAAIC 842
            L+ V    R   + P +L+ ++           AS+   L++H    +   E + S  + 
Sbjct: 1107 LVKVNEEMRDDEMWPSVLIAIRVKQNDLKVLCTASIYPVLTEHIYTFELEVEEVTSTELV 1166

Query: 843  FEFTNCLKLNGK 854
            FEFT   K N K
Sbjct: 1167 FEFTPFHKSNWK 1178


>gi|449470346|ref|XP_004152878.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1074

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 233/762 (30%), Positives = 370/762 (48%), Gaps = 94/762 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG-NSETAGGLEHLQK 59
           + ++ +  ++GI+GM GIGKTTL+KA+F+ F H F    F+ ++   ++ +  GL  LQ+
Sbjct: 117 ISTNHSTLVLGIYGMSGIGKTTLSKALFNHFFHFFNSRSFLPNINSLSTSSPDGLLRLQQ 176

Query: 60  QMLS-----TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRL-IGELDQF 113
            +LS     T L  +      +     +ER++  K+L+VLDD++ + Q   L I +   F
Sbjct: 177 TLLSDLLIATNLRSRSSTTTDSTVVRMQERLQNKKVLVVLDDLDRIEQANALAIRDRRWF 236

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSR 173
           G GSRI++TTR+K++L+  + +E      N L  EE+ E F   AF+E + PE+L   S+
Sbjct: 237 GDGSRIIITTRNKQILDTLKVDEVYNMESNLLNDEESLELFSYHAFREQNPPEELLECSK 296

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKR-KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
           S+VSY    PL LE+LG S    R    W   +  L RI      D+ + L+I F  L  
Sbjct: 297 SIVSYCGSLPLALEILGGSFFGGRPMEEWRSAMERLKRI---PAWDLQEKLRIGFEGLRD 353

Query: 233 RV-KSIFLDIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSI---SGNFLNMH 284
            + + IFLD+ C+F G  ++ V  I+D      ES  L  L  + LV +   SG  L MH
Sbjct: 354 EMEREIFLDVCCYFVGMKEELVVKIMDGCGMYGESG-LRGLKWRCLVGVEFWSGR-LKMH 411

Query: 285 DILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLD 344
           D++++MGR+IVRQ   KEP +RSR+W   E  ++L H  G++ IEG+ +D+   KG N +
Sbjct: 412 DLVRDMGREIVRQTCVKEPARRSRVWLYHEALKILLHQNGSENIEGLAIDMG--KGNNKE 469

Query: 345 P---RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLH 401
                AF  M NLRL K                    L+Y  +   N    + K+LR++ 
Sbjct: 470 KFRLEAFGKMRNLRLLK--------------------LNYVHLIGSNFEHIISKELRWIC 509

Query: 402 WDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSL 461
           W  +PL+++PS+F   NLV +++R S +  PW    +      Q  + L  L+    + L
Sbjct: 510 WHGFPLKSIPSSFYQGNLVAIDMRYSSLIHPWTWRDS------QILENLKVLNLSHSEKL 563

Query: 462 RSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLD 521
           +  P           NF+   NL    Q+  K        +A+  +  SI  L  L +++
Sbjct: 564 KKSP-----------NFTKLPNL---EQLKLK------NCTALSSLHPSIGQLCKLHLIN 603

Query: 522 LRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
           L+ C  L  + TS   L SL T I+ GC  ++   + L  +E L  + +DRT I+ +P S
Sbjct: 604 LQNCTNLSSLPTSIYNLHSLQTFIISGCSKIDCLHDDLGHLESLTTLLADRTAISHIPFS 663

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
              L  L  L +  C    N     GS   L + L + +    LP             + 
Sbjct: 664 IVKLKKLTDLSLCGC----NCRSGSGSSASLPWRLVSWA----LPRP-----------NQ 704

Query: 642 HCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN-NFESLPAII 700
            C  L + P + L GLS++  L + +  +  +P +I  LS L+ L L GN N   L   +
Sbjct: 705 TCTAL-TLPSS-LQGLSSLTELSLQNCNLESLPIDIGSLSELKKLNLGGNKNLRVLGTEL 762

Query: 701 KQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP 742
             + +L  +++E+   L+ + E P  ++      CK L   P
Sbjct: 763 CGLLKLNELNVENCGRLEFIQEFPKNMRSFCATSCKSLVRTP 804



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 125/264 (47%), Gaps = 10/264 (3%)

Query: 512 ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YS 570
           + L +L+VL+L   ++LK+ S +F KL +L  L L  C  L      + ++  L  I   
Sbjct: 547 QILENLKVLNLSHSEKLKK-SPNFTKLPNLEQLKLKNCTALSSLHPSIGQLCKLHLINLQ 605

Query: 571 DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA 630
           + T ++ LP+S  NL  L+   +  CSK+D L D++G LE L  +LA  +AIS +P S+ 
Sbjct: 606 NCTNLSSLPTSIYNLHSLQTFIISGCSKIDCLHDDLGHLESLTTLLADRTAISHIPFSIV 665

Query: 631 LSNMLR--SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR-EIPQEIAYLSSLEILY 687
               L   SL   +C+       +    L +  L   +       +P  +  LSSL  L 
Sbjct: 666 KLKKLTDLSLCGCNCRSGSGSSASLPWRLVSWALPRPNQTCTALTLPSSLQGLSSLTELS 725

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC----LKYLHLIDCKMLQSLPV 743
           L   N ESLP  I  +S+L+ ++L     L+ L    LC    L  L++ +C  L+ +  
Sbjct: 726 LQNCNLESLPIDIGSLSELKKLNLGGNKNLRVLGT-ELCGLLKLNELNVENCGRLEFIQE 784

Query: 744 LPFCLESLDLTGCNMLRSLPELPL 767
            P  + S   T C  L   P++ +
Sbjct: 785 FPKNMRSFCATSCKSLVRTPDVSM 808


>gi|15241561|ref|NP_198701.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758062|dbj|BAB08641.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006983|gb|AED94366.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 986

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 201/647 (31%), Positives = 328/647 (50%), Gaps = 84/647 (12%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETA---GGLE-HLQKQ 60
           + V+IVGI G  GIGKTT+A+A+    S  F+ SCF+ +VRG+        GL+  LQ++
Sbjct: 197 EQVRIVGICGPAGIGKTTIARALQSLLSSNFQRSCFMENVRGSLNIGLDEYGLKLDLQER 256

Query: 61  MLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS  +++K    G  I H    ++R+   K+LI+LDDVN++  L  L  +   FG GSR
Sbjct: 257 LLSKIMNQK----GMRIEHLGTIRDRLHDQKVLIILDDVNDL-DLYALADQTTWFGPGSR 311

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I+VTT D  +L+K   +   +Y V+    +EA E FC  AF+++  P+ +   +  V   
Sbjct: 312 IIVTTEDNELLQKH--DINNVYHVDFPSRKEALEIFCRCAFRQSSAPDTILKLAERVTEL 369

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLH----DLNRICESEIHDIYDILKISFNKLTPRV 234
               PL L V+GSSL  K +  W  ++      L+R  E++       L++ ++ L    
Sbjct: 370 CGNLPLGLCVIGSSLHGKTEDEWEILIRRLEISLDRDNEAQ-------LRVGYDSLHENE 422

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGN-FLNMHDILQEM 290
           +++FL IA FF  +D+  V ++L DS  DV   L  L +KSL+ IS N  + MH++LQ +
Sbjct: 423 QALFLSIAVFFNYKDRQLVMAMLLDSNLDVEYGLRTLANKSLIHISRNEKIVMHNLLQHV 482

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
           GRQ ++++   EP KR  L D  EI  VL+++     + GI  D+S+I  + L  RAF  
Sbjct: 483 GRQAIQRQ---EPWKRHILIDADEICNVLENDTDARIVSGISFDISRIGEVFLSERAFKR 539

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           + NL+  + +   + E               ++V++P  +++ P +LR L W+ YP R+L
Sbjct: 540 LCNLQFLRVFKTGYDE--------------KNRVRIPENMEF-PPRLRLLQWEAYPRRSL 584

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
                 + LVEL++  S +E+ W+G         Q    L  +S      L+  P   + 
Sbjct: 585 SLKLNLEYLVELDMEGSLLEKLWDG--------TQPLANLKKMSLSSSWYLKKLPDLSNA 636

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRL----YLGQSAIEEVPSSIECLTDLEVLDLRGCK 526
                ++   C NL+E P     + +L     +G   ++EVP  I  L  LE++++ GC 
Sbjct: 637 TNLEELDLRACQNLVELPSSFSYLHKLKYLNMMGCRRLKEVPPHIN-LKSLELVNMYGCS 695

Query: 527 RLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLK--RIYSDR------------ 572
           RLK    SF  + + ++ + +   ++E  PE +     L+   IY  R            
Sbjct: 696 RLK----SFPDISTNISSLDISYTDVEELPESMTMWSRLRTLEIYKSRNLKIVTHVPLNL 751

Query: 573 -------TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
                  T I ++P   +N+ GL++LF+  C KL +LP+  GSL YL
Sbjct: 752 TYLDLSETRIEKIPDDIKNVHGLQILFLGGCRKLASLPELPGSLLYL 798



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 156/394 (39%), Gaps = 99/394 (25%)

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIG 607
           LNLE+  E+  +   L++++    P          L  L+ + +     L  LPD  N  
Sbjct: 588 LNLEYLVELDMEGSLLEKLWDGTQP----------LANLKKMSLSSSWYLKKLPDLSNAT 637

Query: 608 SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD 667
           +LE L   L A   + +LPSS +  + L+ L+   C+ L+  P    + L ++ L+++  
Sbjct: 638 NLEELD--LRACQNLVELPSSFSYLHKLKYLNMMGCRRLKEVPPH--INLKSLELVNMYG 693

Query: 668 YA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC 726
            + ++  P     +SSL+I Y    + E LP  +   S+LR + +     L+ +  +PL 
Sbjct: 694 CSRLKSFPDISTNISSLDISY---TDVEELPESMTMWSRLRTLEIYKSRNLKIVTHVPLN 750

Query: 727 LKYLHLIDCKMLQSLP---VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSL 783
           L YL L + + ++ +P        L+ L L GC  L SLPELP  L YL+  +C  L S+
Sbjct: 751 LTYLDLSETR-IEKIPDDIKNVHGLQILFLGGCRKLASLPELPGSLLYLSANECESLESV 809

Query: 784 PELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICF 843
                              S P         + S +E                       
Sbjct: 810 -------------------SCP--------FNTSYME----------------------L 820

Query: 844 EFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIP 903
            FTNC KLN +A   I+  S         AS                      LPG E+P
Sbjct: 821 SFTNCFKLNQEARRGIIQQSF----SHGWAS----------------------LPGRELP 854

Query: 904 DWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
               ++S+G SI ++L   +      GF    V+
Sbjct: 855 TDLYHRSTGHSITVRLEGKTPFSAFFGFKVFLVI 888


>gi|334188321|ref|NP_001190516.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008726|gb|AED96109.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1181

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 258/902 (28%), Positives = 411/902 (45%), Gaps = 155/902 (17%)

Query: 81   TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIY 140
             K+R++  K+LIVLDDV+ +  LK L+G+   FG GSRI+VTT+D+ +L+  + +   IY
Sbjct: 230  VKQRLKHKKVLIVLDDVDNLELLKTLVGQTGWFGPGSRIIVTTQDRILLKSHKIDH--IY 287

Query: 141  RVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSH 200
             V     + A    C  AF  N  P+     +  V       PL L ++GSSL  + K  
Sbjct: 288  EVGYPSRKLALRILCRSAFDRNSPPDGFMQLANEVTELVGNLPLALNIMGSSLKGRDKEE 347

Query: 201  WGKVLHDL-NRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDD 259
            W +++  L N + + EI      L++S+++L    + IFL IAC       +++ S+L D
Sbjct: 348  WIEMMPSLRNSLVDGEI---LKTLRVSYDRLHGNYQEIFLYIACLLNCCGVEYIISMLGD 404

Query: 260  SESDVLDILIDKSLVSIS--GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISR 317
            +    L IL +KSL+ IS     + MH +LQ++GR+IVR ES   PGKR  L D ++I  
Sbjct: 405  NAIIGLKILAEKSLIHISPLDKTVEMHSLLQKLGRKIVRDESFGNPGKRRFLLDAEDICD 464

Query: 318  VLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTE 376
            V   N GT+ + GI L+  +I G +++D ++F  M NL+  K +       E     S E
Sbjct: 465  VFTDNTGTETVLGISLNTLEINGTLSVDDKSFQGMHNLQFLKVF-------ENWRRGSGE 517

Query: 377  EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGE 436
              LS     LP GL+ LP+KLR LHW  +PLR +PSNFK + LV L +  S++E+ WEG 
Sbjct: 518  GILS-----LPQGLNSLPRKLRLLHWYKFPLRCMPSNFKAEYLVNLEMAYSQLERLWEG- 571

Query: 437  KACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR 496
                    Q    L  +     ++L+  P           + SY VNL E    S K   
Sbjct: 572  -------TQQLGSLKKMDLSKSENLKEIP-----------DLSYAVNLEEMDLCSCK--- 610

Query: 497  LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
                  ++  +PSS+  L  L VL +  C  ++ + T    L SL  L L  C  L  FP
Sbjct: 611  ------SLVTLPSSVRNLDKLRVLRMSSCSNVEVLPTDL-NLESLDLLNLEDCSQLRSFP 663

Query: 557  EILEKMEHLKRIYSDRTPITELPSSF-ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI 615
            +I   +  L       T I E  S + EN+  L  L  + C  L +LP N    E+L  +
Sbjct: 664  QISRNISILNL---SGTAIDEESSLWIENMSRLTHLRWDFC-PLKSLPSNFRQ-EHLVSL 718

Query: 616  LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
                S + +L         L ++D S  + L+ FP                         
Sbjct: 719  HMTHSKLEKLWEGAQPFGNLVNIDLSLSEKLKEFPN------------------------ 754

Query: 676  EIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID 734
             ++ +++L+ L L G  +  ++P+ I+ +S+L  +++     L++LP   + L+ LH   
Sbjct: 755  -LSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEALPT-DVNLESLH--- 809

Query: 735  CKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELP------L 788
                           +LDL+GC+ L + P++   ++ L L+D     ++ E+P       
Sbjct: 810  ---------------TLDLSGCSKLTTFPKISRNIERLLLDDT----AIEEVPSWIDDFF 850

Query: 789  CLQLLTVRNCNRLQSLPEILLCLQEL---------------DASVLEKLSKHSPDLQWAP 833
             L  L+++ C RL+++   +  L+ +               DAS++ ++ +   DL    
Sbjct: 851  ELTTLSMKGCKRLRNISTSICELKCIEVANFSDCERLTEFDDASMVRRILRTIDDLIALY 910

Query: 834  ESL-----------KSAAIC---FEFTNCLK--LNGKANNKILADSLLRIRHMAIASLRL 877
            E             K  +IC   F++   L    N    + I A+          +SL  
Sbjct: 911  EEASFLHAIFVLCRKLVSICAMVFKYPQALSYFFNSPEADLIFANC---------SSLDR 961

Query: 878  GYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
              E  I E          VLPG ++P+ F NQ+ GSS+ I L         +GF  C VL
Sbjct: 962  DAETLILES----NHGCAVLPGGKVPNCFMNQACGSSVSIPLHESYYSEEFLGFKACIVL 1017

Query: 938  DS 939
            ++
Sbjct: 1018 ET 1019


>gi|45544515|dbj|BAD12595.1| truncated N protein [Nicotiana tabacum]
          Length = 638

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 170/441 (38%), Positives = 237/441 (53%), Gaps = 47/441 (10%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQF------SHEFEGSCFVSDVRGNSETAGGLEHLQ 58
           + V+I+GIWGMGG+GKTT+A+AIFD        S++F+G+CF+ D++ N     G+  LQ
Sbjct: 199 NGVRIMGIWGMGGVGKTTIARAIFDTLLGRMDSSYQFDGACFLKDIKENKR---GMHSLQ 255

Query: 59  KQMLSTTLSEKLEVAGP-NIPHFTKERVRRMKLLIVLDDV-NEVGQLKRLIGELDQFGQG 116
             +LS  L EK       +  H    R+R  K+LIVLDD+ N+   L+ L G+LD FG G
Sbjct: 256 NALLSELLREKANYNNEEDGKHQMASRLRSKKVLIVLDDIDNKDHYLEYLAGDLDWFGNG 315

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++TTRDK ++EK       IY V  L   E+ + F   AF +    E+    S  VV
Sbjct: 316 SRIIITTRDKHLIEK----NDIIYEVTALPDHESIQLFKQHAFGKEVPNENFEKLSLEVV 371

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           +Y KG PL L+V GS L   R + W   +  +     S    I D LKIS++ L P+ + 
Sbjct: 372 NYAKGLPLALKVWGSLLHNLRLTEWKSAIEHMKNNSYS---GIIDKLKISYDGLEPKQQE 428

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGR 292
           +FLDIACF  GE+KD++  IL+         L ILIDKSLV IS  N + MHD++Q+MG+
Sbjct: 429 MFLDIACFLRGEEKDYILQILESCHIGAEYGLRILIDKSLVFISEYNQVQMHDLIQDMGK 488

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
            IV    +K+PG+RSRLW  KE+  V+ +N GT A+E I++  S    +    +A  NM 
Sbjct: 489 YIVN--FQKDPGERSRLWLAKEVEEVMSNNTGTMAMEAIWVS-SYSSTLRFSNQAVKNMK 545

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            LR+F                         +      +DYLP  LR      YP  + PS
Sbjct: 546 RLRVFNM----------------------GRSSTHYAIDYLPNNLRCFVCTNYPWESFPS 583

Query: 413 NFKPKNLVELNLRCSKVEQPW 433
            F+ K LV L LR + +   W
Sbjct: 584 TFELKMLVHLQLRHNSLRHLW 604


>gi|30692215|ref|NP_850655.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644403|gb|AEE77924.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1240

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 271/972 (27%), Positives = 418/972 (43%), Gaps = 202/972 (20%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQ 58
            D V+I+GIWG  GIGKTT+A+ + +Q S  F+ S  + +++G        E +  L+ LQ
Sbjct: 287  DEVRIIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQ-LQ 345

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
             QMLS  ++ K       I H    +ER+R  K+ +VLD+V+++GQL  L  E   FG G
Sbjct: 346  NQMLSQMINHK----DIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPG 401

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
            SRI++TT D  VL K  G    +Y+V     +EAF+ FC  AF +    E  +  +  V 
Sbjct: 402  SRIIITTEDLGVL-KAHG-INHVYKVEYPSNDEAFQIFCMNAFGQKQPHEGFDEIAWEVK 459

Query: 177  SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            +     PL L+VLGS+L  K K  W + L  L    + +I     I++ S++ L    K 
Sbjct: 460  ALAGKLPLGLKVLGSALRGKSKPEWERTLPRLRTSLDGKIG---GIIQFSYDALCDEDKY 516

Query: 237  IFLDIACFFEGED----KDFVASILDDSESDVLDILIDKSLVSI---------------- 276
            +FL IAC F GE     K+ +   LD  +   L +L  KSL+S                 
Sbjct: 517  LFLYIACLFNGESTTKVKELLGKFLDVRQG--LHVLAQKSLISFDEEISWKQIVQVLLLN 574

Query: 277  -----------SGNFLNMHDILQEMGRQIVRQE-SEKEPGKRSRLWDPKEISRVLKHNKG 324
                           + MH +L++ GR+  R++       K   L   ++I  VL  +  
Sbjct: 575  KFSHVRHTKRNKSQIIRMHTLLEQFGRETSRKQFVHHRYTKHQLLVGERDICEVLDDDTT 634

Query: 325  TDAIEGIFLDLSKIKGINLD---PRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSY 381
                     D  +  GINLD        N+S   L + +  +F +I  + +   E     
Sbjct: 635  ---------DNRRFIGINLDLYKNEEELNISEKALERIHDFQFVKINYVFTHQPE----- 680

Query: 382  SKVQLP-NGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKAC- 439
             +VQL    L Y   ++R L W  Y    LPS F P+ LVEL++RCSK+ + WEG K   
Sbjct: 681  -RVQLALEDLIYHSPRIRSLKWFPYQNICLPSTFNPEFLVELDMRCSKLRKLWEGTKQLR 739

Query: 440  ---------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNL 484
                           +PSSI+    L  L  + C SL   P +++      ++ + C  +
Sbjct: 740  NLKWMDLSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSINANNLQGLSLTNCSRV 799

Query: 485  IEFPQISGKVTRLYLGQ----SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS 540
            ++ P I   VT L+  +    S++ E+P SI    +L  LD+RGC  L ++ +S   + +
Sbjct: 800  VKLPAIEN-VTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCSSLVKLPSSIGDMTN 858

Query: 541  LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
            L    L  C NL                        ELPSS  NL  L +L +  CSKL+
Sbjct: 859  LKEFDLSNCSNL-----------------------VELPSSIGNLQKLFMLRMRGCSKLE 895

Query: 601  NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAM 660
             LP NI  +                         LR LD + C  L+SFP       + +
Sbjct: 896  TLPTNINLIS------------------------LRILDLTDCSQLKSFPEIS----THI 927

Query: 661  GLLHISDYAVREIPQEIAYLSSLEI---------------------LYLSGNNFESLPAI 699
              L +   A++E+P  I   S L +                     L L   + + +P  
Sbjct: 928  SELRLKGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPHALDIITDLLLVSEDIQEVPPW 987

Query: 700  IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP----------VLPFCL- 748
            +K+MS+LR + L + N L SLP+LP  L Y++  +CK L+ L             P C  
Sbjct: 988  VKRMSRLRALRLNNCNSLVSLPQLPDSLDYIYADNCKSLERLDCCFNNPEIRLYFPKCFK 1047

Query: 749  ---ESLDL---TGCNMLRSLP--ELPLCLQY---------LNLEDCNMLRSLPELPLCLQ 791
               E+ DL   T       LP  ++P C  +         + L++ ++  +L     C+ 
Sbjct: 1048 LNQEARDLIMHTSTRKYAMLPSIQVPACFNHRATSGDYLKIKLKESSLPTTL-RFKACIM 1106

Query: 792  LLTVRNCNRLQSL-PEILLCLQE--------LDASVLEKLSKHSPDLQWAPESLKSAAIC 842
            L+ V    R   + P +L+ ++           AS+   L++H    +   E + S  + 
Sbjct: 1107 LVKVNEEMRDDEMWPSVLIAIRVKQNDLKVLCTASIYPVLTEHIYTFELEVEEVTSTELV 1166

Query: 843  FEFTNCLKLNGK 854
            FEFT   K N K
Sbjct: 1167 FEFTPFHKSNWK 1178


>gi|356499237|ref|XP_003518448.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1176

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 237/765 (30%), Positives = 364/765 (47%), Gaps = 101/765 (13%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEV----AGP 75
           KTT+A+ +F +   +F+ SCF+ +VR  S    G+  LQ ++LS    + LE+     G 
Sbjct: 226 KTTVARVVFQKIKDQFDVSCFLDNVREISRETNGMLRLQTKLLSHLAIKGLEIIDLDEGK 285

Query: 76  N-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRG 134
           N I +   E+    K+L+VLDDV++  QL  L   ++ FG+GSR+++TTRD +VL     
Sbjct: 286 NTIINLLSEK----KVLLVLDDVDDTSQLGNLAKRVEWFGRGSRVIITTRDTQVLISHGV 341

Query: 135 EEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLC 194
            E   Y +  L  +E+ +     AFK +   E     S+ V  +  G PL LE+LGS LC
Sbjct: 342 VEN--YNIEFLNSDESLQLLSQKAFKRDEPLEHYLELSKVVAKHAGGLPLALELLGSFLC 399

Query: 195 LKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVA 254
            + +  W +V+  +  +  S  H +   L+IS+N L    K++FLDIACFF+G  K+   
Sbjct: 400 GRSEFQWREVVDMIKEVSAS--HIVMKSLRISYNGLPRCHKALFLDIACFFKGRVKELAT 457

Query: 255 SIL---DDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
             L   D   +  +++L++KSL +  G  + MHD+LQE  R+IV +ES  + GKRSRLW 
Sbjct: 458 QTLEICDRYPAVGIELLVEKSLATYDGFTIGMHDLLQETAREIVIEESHVDAGKRSRLWS 517

Query: 312 PKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
            ++ ++VLK+++  ++IEGI L+  +    N DP AF+ M NLRL     P         
Sbjct: 518 LEDTNQVLKYSRENESIEGIALNSPEKDEANWDPEAFSRMYNLRLLIISFP--------- 568

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
                       ++L  GL  L   L++L W+ + L TLP   +   LVEL +  SK++ 
Sbjct: 569 ------------IKLARGLKCLCSSLKFLQWNDFSLETLPLGVQLDELVELKMYSSKIKN 616

Query: 432 PWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS 491
            W G +A            + L F                    I+ SY  +LI+ P +S
Sbjct: 617 IWNGNQA-----------FAKLKF--------------------IDLSYSEDLIQTPIVS 645

Query: 492 GK---VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG 548
           G       L +G   + EV  S+     L VL ++ CK L+ I     ++ SL  LIL G
Sbjct: 646 GAPCLERMLLIGCINLVEVHPSVGQHKRLVVLCMKNCKNLQ-IMPRKLEMDSLEELILSG 704

Query: 549 CLNLEHFPEILEKMEHLKRIYSDR-TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
           C  ++  PE  + M+ L  +  +    +  LP+S  NL  L  L +  CS+L  LP+ + 
Sbjct: 705 CSKVKKLPEFGKNMKSLSLLSVENCINLLCLPNSICNLKSLRKLNISGCSRLSTLPNGLN 764

Query: 608 SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAM------- 660
             E L  +  + +AI ++  S      L+ L     K L    +  LL +S         
Sbjct: 765 ENESLEELDVSGTAIREITLSKVRLEKLKELSFGGRKELAPNSQNLLLWISKFMRQPNLK 824

Query: 661 ---------------GLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPA-IIKQMS 704
                            L   D      P  +  LS L+ L LSGNNF + PA  I  +S
Sbjct: 825 ESTMPPLSSLLALVSLDLSYCDLNDESFPSHLGSLSLLQDLDLSGNNFVNPPAQCIINLS 884

Query: 705 QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLE 749
            L+ +   D   L+SLP LP  L+ L+  +C  L+     PF L+
Sbjct: 885 MLQNLSFNDCPRLESLPVLPPNLQGLYANNCPKLK-----PFNLD 924


>gi|356503056|ref|XP_003520328.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 968

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 194/585 (33%), Positives = 298/585 (50%), Gaps = 69/585 (11%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG--NSETAGGLEHLQKQMLSTTL 66
           I+ IWGMGG GKTT AKAI+++ +  F    F+ D+R   +   + GL  LQ+++LS  L
Sbjct: 222 IIVIWGMGGSGKTTAAKAIYNEINCRFGHKSFIEDIREVCSQTESKGLVSLQEKLLSDIL 281

Query: 67  SEKLEVAGPNIPHFTKE-RVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
               ++    +     E R+   ++LIVLDDVNE+GQ++ L G  + FG G+ I++TTRD
Sbjct: 282 KTNHQIQNVGMGTIMIEKRLSGKRVLIVLDDVNEIGQVEGLCGNCEWFGPGTVIIITTRD 341

Query: 126 KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
             +L   + +   +Y +  +   E+ E F   AF E    +D N  +RSVV Y  G PL 
Sbjct: 342 VGLLNTLKVD--CVYEMEQMNENESLELFSWHAFDEAKPRKDFNELARSVVVYCGGLPLA 399

Query: 186 LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFLDIACF 244
           L VLGS L  +RK+ W  VL  L  I   E+      L+ISF+ L+  + K IFLD+ CF
Sbjct: 400 LRVLGSYLNNRRKNLWESVLSKLEMIPNGEVQKK---LRISFDGLSDYMEKDIFLDVCCF 456

Query: 245 FEGEDKDFVASILDDSE---SDVLDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQESE 300
           F G+D+ +V  +L+  +     V+  LI +SL+ +   N L MH +LQEMGR+I+R++  
Sbjct: 457 FIGKDRAYVTDVLNGRKLHAKTVITDLIGRSLIRVEKNNKLGMHPLLQEMGREIIREKLW 516

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
           KEPGKRSRLW  +++  VL  N GT+AIEG+ L             AF  M NLRL    
Sbjct: 517 KEPGKRSRLWFHEDVLDVLTKNTGTEAIEGLALKSHLTSRACFKTCAFEKMKNLRLL--- 573

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                            QL ++  QL     YL K+L+++ W  +  + +P+N   ++++
Sbjct: 574 -----------------QLDHA--QLAGNYCYLSKQLKWICWQGFRSKYIPNNLYLEDVI 614

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
             +L+ S ++  WE      P  + N K L                          N S+
Sbjct: 615 AFDLKHSHLQLLWEE-----PQVLWNLKIL--------------------------NLSH 643

Query: 481 CVNLIEFPQISG--KVTRLYLGQS-AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
             +L E P  S    + +L L    ++ +V  SI  L +L +++L+ C  L  +     K
Sbjct: 644 SKDLTETPDFSTLPSLEKLILKDCPSLCKVHQSIGKLNNLLLINLKDCTSLSNLPKEIYK 703

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
           L+SL TLIL GC  +      + +ME L  + ++ T + ++P SF
Sbjct: 704 LKSLKTLILSGCSKINILENDIVQMESLITLIAENTAMKQVPFSF 748



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 33/213 (15%)

Query: 446 NFKYLSA-LSFKGCQSLRS--FPSNLHF--VCPVTINFSYCVNLIEFPQISGKVTRLYLG 500
           N+ YLS  L +   Q  RS   P+NL+   V    +  S+   L E PQ+   +  L L 
Sbjct: 583 NYCYLSKQLKWICWQGFRSKYIPNNLYLEDVIAFDLKHSHLQLLWEEPQVLWNLKILNLS 642

Query: 501 QSA-IEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
            S  + E P     L  LE L L+ C  L ++  S  KL +L+ + L  C +L + P   
Sbjct: 643 HSKDLTETPD-FSTLPSLEKLILKDCPSLCKVHQSIGKLNNLLLINLKDCTSLSNLP--- 698

Query: 560 EKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAA 619
                 K IY               L  L+ L +  CSK++ L ++I  +E L  ++A  
Sbjct: 699 ------KEIY--------------KLKSLKTLILSGCSKINILENDIVQMESLITLIAEN 738

Query: 620 SAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
           +A+ Q+P S  +S   +S+      G E F  +
Sbjct: 739 TAMKQVPFSFVIS---KSIGYISLCGFEGFSHS 768


>gi|227438257|gb|ACP30618.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1016

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 231/756 (30%), Positives = 368/756 (48%), Gaps = 92/756 (12%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-LQKQM 61
            SD V+++GIWG  GIGKTT+A+  F+Q S+ F+ S F+ D++ N       ++ L+ Q+
Sbjct: 171 GSDEVRMIGIWGPPGIGKTTIARFAFNQLSNRFQLSVFMDDLKPNPTRLCSDDYSLKLQL 230

Query: 62  LSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
               +S+        + H      R++  K+L+VLD V+   QL  +  E   FG GSRI
Sbjct: 231 HQRFMSQITNHKDMVVSHLGVASNRLKDKKVLVVLDGVDRSVQLDAVAKEAWWFGPGSRI 290

Query: 120 VVTTRDKRVLEKFRGEE-KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           ++TT+D+R+   FR      IY+V+    + A + FC ++F +    +     +R V   
Sbjct: 291 IITTQDRRI---FRAHGVNHIYKVDFPTSDAALQIFCTYSFGQKSPKDGFEELAREVTQL 347

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
           +   PL L V+GS      K  W   ++ + R+  S   DI  ILK S++ L    K +F
Sbjct: 348 SGELPLGLRVMGSYFKGMSKQEW---INAIPRLRTSLDSDIGSILKFSYDALDDEDKYLF 404

Query: 239 LDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS-GNFLNMHDILQEMGRQI 294
           L IAC ++ E  + V   L     +V   L++L+DKSL+SIS    + MH +L+++GR+I
Sbjct: 405 LYIACCYKSEWINEVEEYLAKKFVEVRQRLNVLVDKSLISISLLGVIEMHSLLKKLGREI 464

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNK-GTDAIEGIFLDLSK-IKGINLDPRAFTNMS 352
           V ++S+ EPG+R  L+D +E+  VL  +  G+ ++ GI LD S+  K I++  +AF  MS
Sbjct: 465 VCKQSQ-EPGQRQFLYDEREVCEVLTGDATGSKSVIGINLDYSREGKEIDISEKAFEGMS 523

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NL+  K     F                   ++   GL YLP KLR L W   P+   P 
Sbjct: 524 NLQFLKVSCSHF------------------TMKSTRGLSYLPHKLRLLKWSHCPMTCFPC 565

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           N   + LVEL++  SK+E+ WE     V   +++ K +   + K    L S  +NL    
Sbjct: 566 NVNFEFLVELSMSNSKLEKLWE-----VTKPLRSLKRMDMRNSKELPDL-STATNLK--- 616

Query: 473 PVTINFSYCVNLIEFPQISGK-VTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
              +N S C +LI+ P + G  +  LY+ G S++ E PS I    +LE LDL        
Sbjct: 617 --RLNLSNCSSLIKLPSLPGNSMKELYIKGCSSLVEFPSFIGNAVNLETLDLSSLP---- 670

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLE 589
                               NL   P  +E   +LK++     + + ELP S  NL  L 
Sbjct: 671 --------------------NLLELPSFVENATNLKKLDLRFCSNLVELPFSIGNLQKLW 710

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK----- 644
            L ++ CSKL+ LP NI +L+ LY++    S  S L S   +S  L  LD          
Sbjct: 711 WLELQGCSKLEVLPTNI-NLKSLYFL--NLSDCSMLKSFPQISTNLEKLDLRGTAIEQVP 767

Query: 645 -GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
             + S P + +L +S    L  S +A+  I +          L+L+    + LP  +K++
Sbjct: 768 PSIRSRPCSDILKMSYFENLKESPHALERITE----------LWLTDTEIQELPPWVKKI 817

Query: 704 SQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ 739
           S+L  + ++    L S+P L   ++Y+   DC+ L+
Sbjct: 818 SRLSQLVVKGCRKLVSVPPLSDSIRYIDASDCESLE 853



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 135/579 (23%), Positives = 230/579 (39%), Gaps = 142/579 (24%)

Query: 443 SIQNFKYL----SALSFKGCQSLRSFPSNLHFV----CPVT-----INFSYCVNLIEFPQ 489
            + N ++L    S  + K  + L   P  L  +    CP+T     +NF + V       
Sbjct: 521 GMSNLQFLKVSCSHFTMKSTRGLSYLPHKLRLLKWSHCPMTCFPCNVNFEFLV------- 573

Query: 490 ISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
                  L +  S +E++    + L  L+ +D+R  K L  +ST+               
Sbjct: 574 ------ELSMSNSKLEKLWEVTKPLRSLKRMDMRNSKELPDLSTA--------------- 612

Query: 550 LNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPG--LEVLFVEDCSKLDNLPDNI 606
                         +LKR+  S+ + + +LPS    LPG  ++ L+++ CS L   P  I
Sbjct: 613 -------------TNLKRLNLSNCSSLIKLPS----LPGNSMKELYIKGCSSLVEFPSFI 655

Query: 607 GSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHI 665
           G+   L  + L++   + +LPS V  +  L+ LD   C  L                   
Sbjct: 656 GNAVNLETLDLSSLPNLLELPSFVENATNLKKLDLRFCSNL------------------- 696

Query: 666 SDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
                 E+P  I  L  L  L L G +  E LP  I  +  L F++L D +ML+S P++ 
Sbjct: 697 -----VELPFSIGNLQKLWWLELQGCSKLEVLPTNI-NLKSLYFLNLSDCSMLKSFPQIS 750

Query: 725 LCLKYLHLIDCKMLQSLPVLPF--CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRS 782
             L+ L L    + Q  P +    C + L ++    L+  P     +  L L D  +   
Sbjct: 751 TNLEKLDLRGTAIEQVPPSIRSRPCSDILKMSYFENLKESPHALERITELWLTDTEIQEL 810

Query: 783 LPELPLCLQL--LTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAA 840
            P +    +L  L V+ C +L S+P +   ++ +DAS  E        L+    S  +  
Sbjct: 811 PPWVKKISRLSQLVVKGCRKLVSVPPLSDSIRYIDASDCE-------SLEMIECSFPNQF 863

Query: 841 ICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGS 900
           +  +F NC KLN +A N I+  S                                VLPG 
Sbjct: 864 VWLKFANCFKLNQEARNLIIQKS-----------------------------EFAVLPGG 894

Query: 901 EIPDWFSNQS-SGSSICIQL---PPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQF 956
           ++P +F++++  G  + I+L   P   S R    F  C +L +K     C+       Q 
Sbjct: 895 QVPAYFTHRAIGGGPLTIKLNDNPLPKSMR----FKACILLLNKGDHDTCYNEELT--QV 948

Query: 957 DLEIKTLSETKHVDLG---YNSRYIEDLIDSDRVILGFK 992
           +++ K  S+T ++ L    Y  R+  + + S+ ++  FK
Sbjct: 949 EVKFKYGSKTLYLPLAGHLYTFRFGAN-VSSNELLFEFK 986


>gi|227438243|gb|ACP30611.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1050

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 220/664 (33%), Positives = 325/664 (48%), Gaps = 85/664 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAGG 53
           ++ V +VGIWG  GIGK+T+A+A+F + S+ F+   F+             R N +  G 
Sbjct: 204 AEQVLMVGIWGPSGIGKSTIARALFGRLSYRFQRCVFIDRSFIDKTLENFRRINLDDYGV 263

Query: 54  LEHLQKQMLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
              LQ++ LS  L  K       I H      R++  K+LIVLDDV++   L  L+G+  
Sbjct: 264 KLQLQEKFLSEILDHK----DVKIDHLGVLGGRLQNHKVLIVLDDVDDRLLLDALVGQTL 319

Query: 112 QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH 171
            FG GSRI+V T+D  +L     E  ++Y V     ++A E FC  AFK N   +     
Sbjct: 320 WFGSGSRIIVVTKDVHLLRSHGIE--RVYEVGFPSEDQALEMFCQSAFKRNSPADGFMDL 377

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT 231
           +  V       PL L +LGSSL  + K  W  +L +L R C +   DI   L+  +++L 
Sbjct: 378 AVEVSKLAGNLPLGLNLLGSSLRGRNKEDWIDMLPEL-RTCLN--GDIERTLRFGYDRLK 434

Query: 232 PRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF---LNMHD 285
              K +FL IAC F GE  D +  +L DS+ DV   L +L+++SL+ I+ +    + MH+
Sbjct: 435 ETHKRLFLHIACLFNGEKVDSLKWLLADSDVDVNTGLRVLVERSLIRITTHLCKTVEMHN 494

Query: 286 ILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGI-NLD 344
           +LQEMGR +V  +S  EPG+R  L D K I  VL+ N GT A+ GI  ++S+I  +  LD
Sbjct: 495 LLQEMGRGMVSAQSFDEPGERQFLTDSKNICDVLEDNSGTKAVLGISWNISEIAELFTLD 554

Query: 345 PRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT 404
             AF  M NLR  K Y        K P    EE    +K+ LP G+  L ++LR LHWD 
Sbjct: 555 EDAFKGMRNLRFLKIY--------KNPLERNEE----TKLYLPQGIQSLSRRLRLLHWDA 602

Query: 405 YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK--------------------------- 437
           YP+  +PS+F P  LVEL +  S++E+ WEG +                           
Sbjct: 603 YPMSRMPSDFSPAYLVELGMIDSELEKMWEGPQPLKYLKNMSLWRSKKLKEVPDLSKAPN 662

Query: 438 ------------ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLI 485
                         +PSSI+  K L  L+ + C  L   P+N++      +    C  + 
Sbjct: 663 LEELYLADCQSLEMLPSSIRYLKNLKTLNMEECSKLEFLPTNINLESLSNLTLYGCSLIR 722

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
            FP IS  ++ L L  +AIEEVP  IE +T L  L + GC +L RIS +  KL+ L  + 
Sbjct: 723 SFPDISHNISVLSLENTAIEEVPWWIEKMTGLTGLFMSGCGKLSRISPNISKLKHLEDVD 782

Query: 546 LLGCLNL-----EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
              C  L     +  P+++     +  +       T LP S  ++   E L + +C KL 
Sbjct: 783 FSLCYALTEDSWQDDPQVVPAPNPIGDLDMSDNTFTRLPHSLVSIKPQE-LNIGNCRKLV 841

Query: 601 NLPD 604
           +LP+
Sbjct: 842 SLPE 845



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 173/404 (42%), Gaps = 85/404 (21%)

Query: 544 LILLGCLN--LEHFPEILEKMEHLKRIYSDRTP-ITELPSSFENLPGLEVLFVEDCSKLD 600
           L+ LG ++  LE   E  + +++LK +   R+  + E+P      P LE L++ DC  L+
Sbjct: 617 LVELGMIDSELEKMWEGPQPLKYLKNMSLWRSKKLKEVPD-LSKAPNLEELYLADCQSLE 675

Query: 601 NLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSA 659
            LP +I  L+ L  + +   S +  LP+++ L + L +L    C  + SFP         
Sbjct: 676 MLPSSIRYLKNLKTLNMEECSKLEFLPTNINLES-LSNLTLYGCSLIRSFPDIS----HN 730

Query: 660 MGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQS 719
           + +L + + A+ E+P  I  ++ L  L++SG     L  I   +S+L+  HLED      
Sbjct: 731 ISVLSLENTAIEEVPWWIEKMTGLTGLFMSGCG--KLSRISPNISKLK--HLEDV----- 781

Query: 720 LPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCL--QYLNLEDC 777
             +  LC            Q +P  P  +  LD++  N    LP   + +  Q LN+ +C
Sbjct: 782 --DFSLCYALTEDSWQDDPQVVPA-PNPIGDLDMSD-NTFTRLPHSLVSIKPQELNIGNC 837

Query: 778 NMLRSLPELPL-CLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESL 836
             L SLPEL    L++L  ++C  L+S+  +                         PE++
Sbjct: 838 RKLVSLPELQTSSLKILRAQDCESLESISHLFR----------------------NPETI 875

Query: 837 KSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIV 896
                   F NC KL  +    ++  S+ +                            ++
Sbjct: 876 ------LHFINCFKLEQEC---LIRSSVFK---------------------------YMI 899

Query: 897 LPGSEI-PDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDS 939
           LPG ++ P++F++++SGS + I L       + + F  C ++D+
Sbjct: 900 LPGRQVPPEYFTHRASGSYLTIPLLESFLHGSFLRFKACLLIDT 943



 Score = 40.8 bits (94), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 29/201 (14%)

Query: 644 KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI--AYLSSLEILYLSGNNFESLPAIIK 701
           +G++S  R        + LLH   Y +  +P +   AYL  L ++    +  E +    +
Sbjct: 586 QGIQSLSRR-------LRLLHWDAYPMSRMPSDFSPAYLVELGMI---DSELEKMWEGPQ 635

Query: 702 QMSQLRFIHLEDFNMLQSLPELPLC--LKYLHLIDCKMLQSLPVLPFC------LESLDL 753
            +  L+ + L     L+ +P+L     L+ L+L DC   QSL +LP        L++L++
Sbjct: 636 PLKYLKNMSLWRSKKLKEVPDLSKAPNLEELYLADC---QSLEMLPSSIRYLKNLKTLNM 692

Query: 754 TGCNMLRSLP-ELPL-CLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLP---EIL 808
             C+ L  LP  + L  L  L L  C+++RS P++   + +L++ N   ++ +P   E +
Sbjct: 693 EECSKLEFLPTNINLESLSNLTLYGCSLIRSFPDISHNISVLSLEN-TAIEEVPWWIEKM 751

Query: 809 LCLQELDASVLEKLSKHSPDL 829
             L  L  S   KLS+ SP++
Sbjct: 752 TGLTGLFMSGCGKLSRISPNI 772


>gi|297815592|ref|XP_002875679.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321517|gb|EFH51938.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1196

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 239/786 (30%), Positives = 383/786 (48%), Gaps = 86/786 (10%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG------NSETAGGLEHLQ 58
           D V+++GIWG  GIGKTT+A+ + +Q S  F+ S  + +++G        E    L+ LQ
Sbjct: 246 DEVRMIGIWGPPGIGKTTIARFLLNQVSDRFQLSTIMVNIKGCYPRPCFDEYTAQLQ-LQ 304

Query: 59  KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            QMLS  +  K       I H    +ER++  K+++VLD+V+ +GQL+ L  E+  FG G
Sbjct: 305 TQMLSQLIKHK----DITISHLGVAQERLKDKKVILVLDEVDHLGQLEALAKEIQWFGPG 360

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++TT D  VL K  G   ++Y+V+    +EAF+ FC  AF +    E     +  V+
Sbjct: 361 SRIIITTEDLGVL-KAHG-INQVYKVDFPSSDEAFQIFCMNAFGQKQPHEGFRNLAWEVI 418

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           +     PL L+VLGS+L    K  W + L  L    + +I     I++ S++ L    K 
Sbjct: 419 ALAGELPLGLKVLGSALRGMSKPEWERALPRLKASLDGKIG---SIIQFSYDALCDEDKY 475

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQ 293
           +FL IAC F       V   L +  S V   L +L +KSL+SI    + MH +LQ+ GR+
Sbjct: 476 LFLYIACLFNFASVHRVEEALANKFSHVRHGLHVLHEKSLISIEYERIQMHTLLQQFGRK 535

Query: 294 IVRQE-SEKEPGKRSRLWDPKEISRVLKHNKG-TDAIEGIFLDLSKI-KGINLDPRAFTN 350
           I R++       K   L   ++I  V  ++   +    GI LDLSK  + +N+  +A   
Sbjct: 536 ISRKQFVHHGLTKHQLLVGERDICDVFDYDTSDSRRFIGINLDLSKTEEELNISEKALER 595

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M + +  + Y     + ++L S             +  GL Y  +K+R L+W  +    L
Sbjct: 596 MHDFQFVRIYGDDLGQTKRLQS-------------VLQGLIYHSQKIRSLNWRYFQDICL 642

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
           PS F P+ LVELNL+ SK+++ WEG K      ++N K+   +   G + L+  P     
Sbjct: 643 PSTFNPEFLVELNLQDSKLQKLWEGTK-----QLKNLKW---MDLGGSRDLKELPDLSTA 694

Query: 471 VCPVTINFSYCVNLIEFPQISGKVT---RLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCK 526
                ++  YC +L+E P   G  T   RLYL   S++ E+P SI   + LE L L  C 
Sbjct: 695 TNLEEVDLQYCSSLVELPSSIGNATKLERLYLRDCSSLVELP-SIGNASKLERLYLDNCS 753

Query: 527 RLKRISTSFC---------KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY-SDRTPIT 576
            L ++ +S               L  L LL C +L   P  +    +LK +Y S  + + 
Sbjct: 754 SLVKLPSSINASNLQEFIENASKLWELNLLNCSSLLELPPSIGTATNLKELYISGCSSLV 813

Query: 577 ELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNML 635
           +LPSS  ++  L+   + +CS L  +P  IG L+ L  + +   S +  LP+++ L + L
Sbjct: 814 KLPSSIGDMTKLKKFDLSNCSSLVEVPSAIGKLQKLSKLKMYGCSKLEVLPTNIDLES-L 872

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE-----------IAYLSSLE 684
           R+LD  +C  L+ FP       + +  L ++  A++E+P             I+Y  SL+
Sbjct: 873 RTLDLRNCSQLKRFPEIS----TNIAYLRLTGTAIKEVPLSIMSWSRLYDFGISYFESLK 928

Query: 685 --------ILYLSGN-NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
                   I  L  N + + +   +K MS+LR + L + N L SLP+    L Y+   +C
Sbjct: 929 EFPHALDIITQLQLNEDIQEVAPWVKGMSRLRVLRLYNCNNLVSLPQFSDSLAYIDADNC 988

Query: 736 KMLQSL 741
           + L+ L
Sbjct: 989 QSLERL 994


>gi|358346019|ref|XP_003637071.1| Resistance protein [Medicago truncatula]
 gi|355503006|gb|AES84209.1| Resistance protein [Medicago truncatula]
          Length = 1303

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 268/845 (31%), Positives = 411/845 (48%), Gaps = 85/845 (10%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S DTV +V I G+GGIGKTTLA ++++  +H+F+ SCF+ +VR N E  G L +LQK +L
Sbjct: 121 SDDTVHMVAIHGIGGIGKTTLAISVYNLIAHQFDVSCFLENVRENHEKHG-LPYLQKIIL 179

Query: 63  STTLSEKLEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
           S    EK E+ G        ++R+++ KLL++LDDVN++ QL+ L G+   FG  SRI++
Sbjct: 180 SKVAEEKKELTGVLQGISILEQRLKQKKLLLILDDVNKLEQLEALAGKHKWFGPSSRIII 239

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS------RSV 175
           TTRDK++L     E  + Y V GL  ++A E     AFK    P   N           V
Sbjct: 240 TTRDKKLLTCHGVE--RTYEVKGLNDKDALELVRWKAFKIEFGPSHNNLSFPQMHVLERV 297

Query: 176 VSYTKGNPLVLEVLGSSL-------CLKRKSHWGKVLHDLNRICESEIHDIYDILKISFN 228
           V+Y  G+PL LEV+GS         C     H+ KV H            I   L++SF+
Sbjct: 298 VAYASGHPLALEVMGSHFYNKTIEQCKVALDHYEKVPHK----------KIQTTLQLSFD 347

Query: 229 KLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDVL----DILIDKSLVSIS--GNFLN 282
            L  + K +FLDIAC F+G     V  IL     +++    ++L++KSL+ IS  GN + 
Sbjct: 348 ALEDKDKFVFLDIACCFKGWKLTRVEEILHAQYGNIMKDNINVLVEKSLIKISESGN-VT 406

Query: 283 MHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGIN 342
           MHD++++MG++IVRQES + PGKRSRLW  ++I  VL+ N GT+ IE I  D      + 
Sbjct: 407 MHDLVEDMGKEIVRQESPENPGKRSRLWFSEDIMHVLEENTGTNQIEIIRFDC--WTRVA 464

Query: 343 LDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHW 402
            D  AF  M NL+   F    F+  +K P              LPN L  L  + RY   
Sbjct: 465 WDGEAFKKMENLKTLIFSDYVFF--KKHPK------------HLPNSLRVL--ECRYPSS 508

Query: 403 DTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLR 462
                 +L  NF  K     N+R   +E   +G        I     L  LS K C  L 
Sbjct: 509 GFLVALSL-FNFPTKKFQ--NMRVLNLE---DGNGLAQIPDISGLPNLEKLSIKNCWELI 562

Query: 463 SFPSNLHFVCPVTINFSYCVNLIEF--PQISGKVTRLYL-GQSAIEEVPSSIECLTD-LE 518
           +   ++ F+  + I    C   I+   P +   +  L L G S +E     ++   D L+
Sbjct: 563 AIDKSVGFLGKLKI-LKICNTKIKSVPPLMLPSLEELDLSGCSILEGFSHEVDGFGDKLK 621

Query: 519 VLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI----LEKMEHLKRIYSDRTP 574
            +  RGC++L+ I     KL SL TL    C  LE FP +    L K++ L  + ++   
Sbjct: 622 TMSFRGCRKLRSIPP--LKLNSLETLDFSSCHRLESFPLVVNGFLGKLKTL--LVTNCYN 677

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL--EYLYYILAAASAISQLPSSVALS 632
           +  +P     L  LEVL +  C  L++ P  +  L  +  +  +     +  +P     S
Sbjct: 678 LKSIPPL--KLDSLEVLDLSCCCSLESFPCVVDELLDKLKFLNIECCIMLRNIPRLRLTS 735

Query: 633 NMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNN 692
             L   + S+C  L+SFP       +  G+L + +  ++E+P     L+  + L   G  
Sbjct: 736 --LEHFNLSYCYSLKSFPEILGEMRNMPGVL-MDETPIKELPFPFKNLTQPKTLCECG-- 790

Query: 693 FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLD 752
           +  LP  +  +++    + E  N +QSL    +C++  +L D  + +SL +L   ++ L 
Sbjct: 791 YVYLPNRMSTLAEFTIKNEEKVNTMQSLHVKYICVRRCNLSDEYLSKSL-MLFANVKELH 849

Query: 753 LTGCNMLRSLPE-LPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILL 809
           LT  N    +P+ +  C  L  L L+DC  L+ +  +P CL++L+  NC  L S  +  L
Sbjct: 850 LTS-NHFTVIPKSIEYCKSLWKLVLDDCKALQEIKGIPPCLRMLSALNCISLTSSCKSKL 908

Query: 810 CLQEL 814
             QEL
Sbjct: 909 LNQEL 913


>gi|3860163|gb|AAC72977.1| disease resistance protein RPP1-WsA [Arabidopsis thaliana]
          Length = 1189

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 238/798 (29%), Positives = 385/798 (48%), Gaps = 99/798 (12%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQ 58
            D  +++GIWG  GIGKTT+A+ +F+Q S  F+ S  + +++G        E +  L+ LQ
Sbjct: 245  DEARMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQ-LQ 303

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
             QMLS  ++ K       I H    +ER+R  K+ +VLD+V+++GQL  L  +   FG G
Sbjct: 304  NQMLSQMINHK----DIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKDTRWFGPG 359

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPE---DLNWHSR 173
            SRI++TT D+ +L K  G    +Y+V     +EAF+ FC  AF +    E   DL W  +
Sbjct: 360  SRIIITTEDQGIL-KAHG-INHVYKVEYPSNDEAFQIFCMNAFGQKQPYEGFCDLAWEVK 417

Query: 174  SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            ++       PL L+VLGS+L    K  W + L  L    + +I     I++ S++ L   
Sbjct: 418  ALAGEL---PLGLKVLGSALRGMSKPEWERTLPRLRTSLDGKIG---GIIQFSYDALCDE 471

Query: 234  VKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEM 290
             K +FL IAC F  E    V  +L +   DV   + +L  KSL+S  G  + MH +L++ 
Sbjct: 472  DKYLFLYIACLFNNESTTKVEEVLANKFLDVGQGIHVLAQKSLISFEGEEIQMHTLLEQF 531

Query: 291  GRQIVRQE-SEKEPGKRSRLWDPKEISRVLKHNK-GTDAIEGIFLDLSKI-KGINLDPRA 347
            GR+  R++       K   L   ++I  VL  +   +    GI LDLSK  + +N+  +A
Sbjct: 532  GRETSRKQFVHHRYTKHQLLVGERDICEVLNDDTIDSRRFIGIHLDLSKNEEELNISEKA 591

Query: 348  FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
               + + +  +         E+L  +                      K+R L W +Y  
Sbjct: 592  LERIHDFQFVRINDKNHALHERLQDLICHS-----------------PKIRSLKWYSYQN 634

Query: 408  RTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY---------------LSA 452
              LPS F P+ LVEL++  SK+++ WEG K        +  Y               L  
Sbjct: 635  ICLPSTFNPEFLVELDMSFSKLQKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEE 694

Query: 453  LSFKGCQSLRSFPSNLHFVCPVTI-NFSYCVNLIEFPQI--SGKVTRLYLGQ-SAIEEVP 508
            L+ + C SL   PS++  +  + I +   C +L+E P    + K+  LYL    ++E++P
Sbjct: 695  LNLRNCSSLVELPSSIEKLTSLQILDLQGCSSLVELPSFGNATKLEILYLDYCRSLEKLP 754

Query: 509  SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEH--LK 566
             SI    +L+ L LR C R+  +  +     +L  L LL C +L   P  +    +  LK
Sbjct: 755  PSINA-NNLQKLSLRNCSRIVELP-AIENATNLWELNLLNCSSLIELPLSIGTARNLFLK 812

Query: 567  RI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL-YYILAAASAISQ 624
             +  S  + + +LPSS  ++  L+   + +CS L  LP +IG+L+ L   I+   S +  
Sbjct: 813  ELNISGCSSLVKLPSSIGDMTNLKEFDLSNCSNLVELPSSIGNLQNLCKLIMRGCSKLEA 872

Query: 625  LPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ--------- 675
            LP ++ L + L +L+ + C  L+SFP       + +  L ++  A++E+P          
Sbjct: 873  LPININLKS-LDTLNLTDCSQLKSFPEIS----THIKYLRLTGTAIKEVPLSIMSWSPLA 927

Query: 676  --EIAYLSSLE----------ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL 723
              +I+Y  SL+           L LS +  E  P  +K+MS+LR+  L + N L SLP+L
Sbjct: 928  EFQISYFESLKEFPHAFDIITELQLSKDIQEVTPW-VKRMSRLRYFRLNNCNNLVSLPQL 986

Query: 724  PLCLKYLHLIDCKMLQSL 741
            P  L YL+  +CK L+ L
Sbjct: 987  PDSLAYLYADNCKSLEKL 1004


>gi|5302807|emb|CAB46048.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268446|emb|CAB80966.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1317

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 247/909 (27%), Positives = 413/909 (45%), Gaps = 157/909 (17%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQKQML 62
            S   ++VGIWG  GIGK+T+ +A+F Q S +F    F++      S+ +G     +K++L
Sbjct: 206  SKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPLRAFLTYKSTSGSDVSGMKLSWEKELL 265

Query: 63   STTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            S  L +K       I HF   ++R++  K+LI+LDDV+ +  LK L+G+ + FG GSRI+
Sbjct: 266  SEILGQK----DIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRII 321

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            V T+D++ L+    +   +Y V       A    C  AF ++  P+D    +  V     
Sbjct: 322  VITQDRQFLKAH--DIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDDFKELAFEVAKLAG 379

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
              PL L VLGSSL  + K  W +++  L         DI   L++S+++L  + + +FL 
Sbjct: 380  HLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGLNG---DIMKTLRVSYDRLHQKDQDMFLC 436

Query: 241  IACFFEGEDKDFVASILDDSESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQES 299
            IAC F G +  +V  +L+D+    L +L +KSL+ I+    + MH++L+++GR+I R +S
Sbjct: 437  IACLFNGFEVSYVKDLLEDNVG--LTMLSEKSLIRITPDGHIEMHNLLEKLGREIDRAKS 494

Query: 300  EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGI---FLDLSKIKGINLDPRAFTNMSNLRL 356
            +  PGKR  L + ++I  V+    GT+ + GI   F +    + + +D  +F  M NL+ 
Sbjct: 495  KGNPGKRQFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFSTRPLLIDKESFKGMRNLQY 554

Query: 357  FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
             K                      +S    P  L YLP KLR L WD  PL++LPS FK 
Sbjct: 555  LKIG-------------------DWSDGGQPQSLVYLPLKLRLLDWDDCPLKSLPSTFKA 595

Query: 417  KNLVELNLRCSKVEQPWEG-------EKACVPSS--------IQNFKYLSALSFKGCQSL 461
            + LV L ++ SK+E+ WEG       +K  +  S        + N + L  L  +GC+SL
Sbjct: 596  EYLVNLIMKYSKLEKLWEGTLPLGSLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESL 655

Query: 462  RSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ--SAIEEVPSSIECLTDLEV 519
             + PS++     +       V LI+   + G     YL    S +E     +   + L +
Sbjct: 656  VTLPSSIQNAIKLRKLHCSGVILIDLKSLEGMCNLEYLSVDCSRVEGTQGIVYFPSKLRL 715

Query: 520  LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP 579
            L    C  LKR+ ++F                         K+E+L ++  + + + +L 
Sbjct: 716  LLWNNCP-LKRLHSNF-------------------------KVEYLVKLRMENSDLEKLW 749

Query: 580  SSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
               + L  L+ +F+     L  +PD   ++      +    ++   PSS+  +  L  LD
Sbjct: 750  DGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLD 809

Query: 640  SSHCKGLESFPRTFLLGLSAMGLLHISD-------------------------------Y 668
             S CK LESFP    L L ++  L+++                                +
Sbjct: 810  ISDCKKLESFPTD--LNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCF 867

Query: 669  AVREIPQEIAYLSSLE-----------ILYLSGNNF--ESLPAIIKQMSQLRFIHLEDFN 715
              + +P  + YL  L            +++L+   +  E L   I+ +  L  + L +  
Sbjct: 868  WNKNLPAGLDYLDCLMRCMPCEFRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMDLSESE 927

Query: 716  MLQSLPELPLC--LKYLHLIDCKMLQSLP---------------------VLPF-----C 747
             L  +P+L     LK+L+L +CK L +LP                     VLP       
Sbjct: 928  NLTEIPDLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDVNLSS 987

Query: 748  LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQL--LTVRNCNRLQSLP 805
            LE+LDL+GC+ LR+ P +   +++L LE+   +  + +L    +L  L + NC  L +LP
Sbjct: 988  LETLDLSGCSSLRTFPLISKSIKWLYLEN-TAIEEILDLSKATKLESLILNNCKSLVTLP 1046

Query: 806  EILLCLQEL 814
              +  LQ L
Sbjct: 1047 STIGNLQNL 1055



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 235/536 (43%), Gaps = 90/536 (16%)

Query: 333  LDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSY--SKVQLPNGL 390
            LDL   + +   P +  N   LR          +++ L  M   E LS   S+V+   G+
Sbjct: 647  LDLEGCESLVTLPSSIQNAIKLRKLHCSGVILIDLKSLEGMCNLEYLSVDCSRVEGTQGI 706

Query: 391  DYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK------------- 437
             Y P KLR L W+  PL+ L SNFK + LV+L +  S +E+ W+G +             
Sbjct: 707  VYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGS 766

Query: 438  --------------------------ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
                                         PSS+QN   L  L    C+ L SFP++L+  
Sbjct: 767  KYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLDISDCKKLESFPTDLNLE 826

Query: 472  CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEV---LDLRGCKRL 528
                +N + C NL  FP I    + +   +   E V    +C  +  +   LD   C  L
Sbjct: 827  SLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVE--DCFWNKNLPAGLDYLDC--L 882

Query: 529  KRISTSFCKLR-SLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLP 586
             R     C+ R   +  + + C   E   E ++ +  L+ +  S+   +TE+P       
Sbjct: 883  MRCMP--CEFRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMDLSESENLTEIP-DLSKAT 939

Query: 587  GLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKG 645
             L+ L++ +C  L  LP  IG+L+ L  + +   + +  LP+ V LS+ L +LD S C  
Sbjct: 940  NLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDVNLSS-LETLDLSGCSS 998

Query: 646  LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMS 704
            L +FP    L   ++  L++ + A+ EI  +++  + LE L L+   +  +LP+ I  + 
Sbjct: 999  LRTFP----LISKSIKWLYLENTAIEEI-LDLSKATKLESLILNNCKSLVTLPSTIGNLQ 1053

Query: 705  QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE 764
             LR ++++    L+ LP            D   L SL +       LDL+GC+ LR+ P 
Sbjct: 1054 NLRRLYMKRCTGLEVLP-----------TDVN-LSSLGI-------LDLSGCSSLRTFPL 1094

Query: 765  LPLCLQYLNLEDCNMLRSLPELPLC------LQLLTVRNCNRLQSLPEILLCLQEL 814
            +   + +L LE+     ++ E+P C      L++L +  C RL+++   +  L+ L
Sbjct: 1095 ISTNIVWLYLENT----AIGEVPCCIEDFTRLRVLLMYCCQRLKNISPNIFRLRSL 1146



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 163/391 (41%), Gaps = 102/391 (26%)

Query: 326  DAIEGIFLDLSKIK-------GINLDPRAFTNMS---NLRLFKFYVPKFYEIEKLPSMST 375
            +AI+ I+LD+S  K        +NL+   + N++   NLR F        +++  P    
Sbjct: 801  NAIKLIYLDISDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVD-FPEGRN 859

Query: 376  E---EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
            E   E   ++K  LP GLDYL             +R +P  F+P+ LV LN+RC K E+ 
Sbjct: 860  EIVVEDCFWNK-NLPAGLDYL----------DCLMRCMPCEFRPEYLVFLNVRCYKHEKL 908

Query: 433  WEGEKA---------------------------------------CVPSSIQNFKYLSAL 453
            WEG ++                                        +PS+I N + L  L
Sbjct: 909  WEGIQSLGSLEEMDLSESENLTEIPDLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRL 968

Query: 454  SFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEV------ 507
              K C  L   P++++     T++ S C +L  FP IS  +  LYL  +AIEE+      
Sbjct: 969  EMKECTGLEVLPTDVNLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEILDLSKA 1028

Query: 508  -----------------PSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
                             PS+I  L +L  L ++ C  L+ + T    L SL  L L GC 
Sbjct: 1029 TKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV-NLSSLGILDLSGCS 1087

Query: 551  NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
            +L  FP I     ++  +Y + T I E+P   E+   L VL +  C +L N+  NI  L 
Sbjct: 1088 SLRTFPLI---STNIVWLYLENTAIGEVPCCIEDFTRLRVLLMYCCQRLKNISPNIFRLR 1144

Query: 611  YLYY-----------ILAAASAISQLPSSVA 630
             L +            L+ A+ ++ +  SV+
Sbjct: 1145 SLMFADFTDCRGVIKALSDATVVATMEDSVS 1175



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 31/252 (12%)

Query: 317  RVLKHNKGTDAIEGIF----LDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
            R  KH K  + I+ +     +DLS+ + +   P   +  +NL+    Y+     +  LPS
Sbjct: 901  RCYKHEKLWEGIQSLGSLEEMDLSESENLTEIP-DLSKATNLK--HLYLNNCKSLVTLPS 957

Query: 373  -MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY------PLRTLPSNFKPKNLVELNLR 425
             +   ++L   +++   GL+ LP  +     +T        LRT P     K++  L L 
Sbjct: 958  TIGNLQKLVRLEMKECTGLEVLPTDVNLSSLETLDLSGCSSLRTFP--LISKSIKWLYLE 1015

Query: 426  CSKVEQPWEGEKAC---------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
             + +E+  +  KA                +PS+I N + L  L  K C  L   P++++ 
Sbjct: 1016 NTAIEEILDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDVNL 1075

Query: 471  VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                 ++ S C +L  FP IS  +  LYL  +AI EVP  IE  T L VL +  C+RLK 
Sbjct: 1076 SSLGILDLSGCSSLRTFPLISTNIVWLYLENTAIGEVPCCIEDFTRLRVLLMYCCQRLKN 1135

Query: 531  ISTSFCKLRSLV 542
            IS +  +LRSL+
Sbjct: 1136 ISPNIFRLRSLM 1147


>gi|6449046|gb|AAF08790.1| downy mildew resistance protein RPP5 [Arabidopsis thaliana]
          Length = 1361

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 264/925 (28%), Positives = 423/925 (45%), Gaps = 182/925 (19%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQKQML 62
            S   ++VGIWG  GIGK+T+ +A+F Q S +F    F++      S+ +G     QK++L
Sbjct: 206  SKEARMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFLTYKSTSGSDVSGMKLSWQKELL 265

Query: 63   STTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            S  L +K       I HF   ++R+   K+LI+LDDV+ +  LK L+G+ + FG GSRI+
Sbjct: 266  SEILGQK----DIKIEHFGVVEQRLNHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRII 321

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            V T+D+++L+    E   +Y V       A +    +AF ++  P+D    +  V     
Sbjct: 322  VITQDRQLLKAH--EIDLVYEVKLPSQGLALKMISQYAFGKDSPPDDFKELAFEVAELVG 379

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
              PL L VLGSSL  + K  W K++  L    + +I +    L++ +++L  + + +F  
Sbjct: 380  SLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEET---LRVGYDRLNKKNRELFKC 436

Query: 241  IACFFEGEDKDFVASILDDSESDV-LDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQE 298
            IACFF G     V  +L+D   DV L +L ++SL+ I+   ++ MH++L+++GR+I R +
Sbjct: 437  IACFFNGFKVSNVKELLED---DVGLTMLAEESLIRITPVGYIEMHNLLEKLGREIDRAK 493

Query: 299  SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFL---DLSKIKGINLDPRAFTNMSNLR 355
            S+  PGKR  L + ++I  VL    GT+ + GI L        +   +D ++F  M NL+
Sbjct: 494  SKGNPGKRQFLTNFEDIREVLTEKTGTETLLGIRLPHPGYLTTRSFLIDEKSFKGMRNLQ 553

Query: 356  LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
                Y+   Y               +S   LP  L Y P+KL+ L WD  PL+ LPSNFK
Sbjct: 554  ----YLEIGY---------------WSDGVLPQSLVYFPRKLKRLWWDNCPLKRLPSNFK 594

Query: 416  PKNLVELNLRCSKVEQPWEGEK-------------------------------------- 437
             + LVEL +  SK+E+ W+G +                                      
Sbjct: 595  AEYLVELRMVNSKLEKLWDGTQPLGSLKKMDLYNSYKLKEIPDLSLAINLEELNLEECES 654

Query: 438  -ACVPSSIQ-------------------------NFKYLSALSFKG---CQSLRSFPSNL 468
               +PSSIQ                         N +YLS  S+      Q +  FP  L
Sbjct: 655  LETLPSSIQNAIKLRELNCWGGLLIDLKSLEGMCNLEYLSVPSWSSRECTQGIVYFPRKL 714

Query: 469  HFV----CPVT---INFS--YCVNLI-EFPQIS---------GKVTRLYLGQS-AIEEVP 508
              V    CP+     NF   Y V LI E+ ++          G +  + L  S  ++E+P
Sbjct: 715  KSVLWTNCPLKRLPSNFKAEYLVELIMEYSELEKLWDGTQSLGSLKEMNLRYSNNLKEIP 774

Query: 509  SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI--LEKMEHLK 566
              +    +LE LDL GC  L  + +S      L+ L +  C NLE FP +  L+ +E+L 
Sbjct: 775  -DLSLAINLEELDLFGCVSLVTLPSSIQNATKLIYLDMSECENLESFPTVFNLKSLEYLD 833

Query: 567  RIYSDRT---PITELPSSFENLP-------GLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
                      P  ++  ++  L        G   + VEDC    NLP     L+YL  ++
Sbjct: 834  LTGCPNLRNFPAIKMGCAWTRLSRTRLFPEGRNEIVVEDCFWNKNLP---AGLDYLDCLM 890

Query: 617  AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA----VRE 672
                    +P     S  L  L+ S CK LE        G+ ++G L   D +    ++E
Sbjct: 891  RC------MPCEFR-SEQLTFLNVSGCK-LEKLWE----GIQSLGSLEEMDLSESENLKE 938

Query: 673  IPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
            +P +++  ++L++L LSG  +  +LP+ I  +  LR +++     L+ LP          
Sbjct: 939  LP-DLSKATNLKLLCLSGCKSLVTLPSTIGNLQNLRRLYMNRCTGLEVLP---------- 987

Query: 732  LIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQ 791
              D  +          LE+LDL+GC+ LR+ P +   +  L LE+   +  +P+L    +
Sbjct: 988  -TDVNLSS--------LETLDLSGCSSLRTFPLISTNIVCLYLEN-TAIEEIPDLSKATK 1037

Query: 792  L--LTVRNCNRLQSLPEILLCLQEL 814
            L  L + NC  L +LP  +  LQ L
Sbjct: 1038 LESLILNNCKSLVTLPSTIGNLQNL 1062



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 233/521 (44%), Gaps = 97/521 (18%)

Query: 345  PRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLS---YSKVQLPNGLDYLPKKLRYLH 401
            P +  N   LR    +     +++ L  M   E LS   +S  +   G+ Y P+KL+ + 
Sbjct: 659  PSSIQNAIKLRELNCWGGLLIDLKSLEGMCNLEYLSVPSWSSRECTQGIVYFPRKLKSVL 718

Query: 402  WDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA----------------------- 438
            W   PL+ LPSNFK + LVEL +  S++E+ W+G ++                       
Sbjct: 719  WTNCPLKRLPSNFKAEYLVELIMEYSELEKLWDGTQSLGSLKEMNLRYSNNLKEIPDLSL 778

Query: 439  -----------CV-----PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
                       CV     PSSIQN   L  L    C++L SFP+  +      ++ + C 
Sbjct: 779  AINLEELDLFGCVSLVTLPSSIQNATKLIYLDMSECENLESFPTVFNLKSLEYLDLTGCP 838

Query: 483  NLIEFPQIS-----GKVTRLYLGQSAIEEVPSSIECLTDLEV---LDLRGCKRLKRISTS 534
            NL  FP I       +++R  L      E+    +C  +  +   LD   C  L R    
Sbjct: 839  NLRNFPAIKMGCAWTRLSRTRLFPEGRNEIVVE-DCFWNKNLPAGLDYLDC--LMRCMP- 894

Query: 535  FCKLRS--LVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVL 591
             C+ RS  L  L + GC  LE   E ++ +  L+ +  S+   + ELP        L++L
Sbjct: 895  -CEFRSEQLTFLNVSGC-KLEKLWEGIQSLGSLEEMDLSESENLKELPD-LSKATNLKLL 951

Query: 592  FVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
             +  C  L  LP  IG+L+ L  + +   + +  LP+ V LS+ L +LD S C  L +FP
Sbjct: 952  CLSGCKSLVTLPSTIGNLQNLRRLYMNRCTGLEVLPTDVNLSS-LETLDLSGCSSLRTFP 1010

Query: 651  RTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFI 709
                L  + +  L++ + A+ EIP +++  + LE L L+   +  +LP+ I  +  LR +
Sbjct: 1011 ----LISTNIVCLYLENTAIEEIP-DLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRL 1065

Query: 710  HLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCL 769
            ++     L+ LP            D  +          LE+LDL+GC+ LR+ P +   +
Sbjct: 1066 YMNRCTGLELLP-----------TDVNLSS--------LETLDLSGCSSLRTFPLISTRI 1106

Query: 770  QYLNLEDCNMLRSLPELPLCLQ------LLTVRNCNRLQSL 804
            + L LE+     ++ E+P C++      +L +  C RL+++
Sbjct: 1107 ECLYLENT----AIEEVPCCIEDFTRLTVLRMYCCQRLKNI 1143



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 130/300 (43%), Gaps = 56/300 (18%)

Query: 385  QLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSI 444
             LP GLDYL             +R +P  F+ + L  LN+   K+E+ WEG        I
Sbjct: 878  NLPAGLDYLD----------CLMRCMPCEFRSEQLTFLNVSGCKLEKLWEG--------I 919

Query: 445  QNFKYLSALSFKGCQSLRSFP-----SNLHFVCPVTINFSYCVNLIEFPQISGKVT---R 496
            Q+   L  +     ++L+  P     +NL  +C      S C +L+  P   G +    R
Sbjct: 920  QSLGSLEEMDLSESENLKELPDLSKATNLKLLC-----LSGCKSLVTLPSTIGNLQNLRR 974

Query: 497  LYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKR---ISTSFC---------------- 536
            LY+ + + +E +P+ +  L+ LE LDL GC  L+    IST+                  
Sbjct: 975  LYMNRCTGLEVLPTDVN-LSSLETLDLSGCSSLRTFPLISTNIVCLYLENTAIEEIPDLS 1033

Query: 537  KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
            K   L +LIL  C +L   P  +  +++L+R+Y +R    EL  +  NL  LE L +  C
Sbjct: 1034 KATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMNRCTGLELLPTDVNLSSLETLDLSGC 1093

Query: 597  SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF-PRTFLL 655
            S L   P     +E LY      +AI ++P  +     L  L    C+ L++  P  F L
Sbjct: 1094 SSLRTFPLISTRIECLYL---ENTAIEEVPCCIEDFTRLTVLRMYCCQRLKNISPNIFRL 1150



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 12/221 (5%)

Query: 332  FLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS---MSTEEQLSYSKVQLPN 388
             L LS  K +   P    N+ NLR  + Y+ +   +E LP+   +S+ E L  S      
Sbjct: 950  LLCLSGCKSLVTLPSTIGNLQNLR--RLYMNRCTGLEVLPTDVNLSSLETLDLSGCSSLR 1007

Query: 389  GLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFK 448
                +   +  L+ +   +  +P   K   L  L L   K           +PS+I N +
Sbjct: 1008 TFPLISTNIVCLYLENTAIEEIPDLSKATKLESLILNNCK-------SLVTLPSTIGNLQ 1060

Query: 449  YLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVP 508
             L  L    C  L   P++++     T++ S C +L  FP IS ++  LYL  +AIEEVP
Sbjct: 1061 NLRRLYMNRCTGLELLPTDVNLSSLETLDLSGCSSLRTFPLISTRIECLYLENTAIEEVP 1120

Query: 509  SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
              IE  T L VL +  C+RLK IS +  +L SL       C
Sbjct: 1121 CCIEDFTRLTVLRMYCCQRLKNISPNIFRLTSLTLADFTDC 1161


>gi|255558308|ref|XP_002520181.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223540673|gb|EEF42236.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  257 bits (656), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 201/644 (31%), Positives = 305/644 (47%), Gaps = 86/644 (13%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ VQ++G++GMGGIGKTTLAKA +++  + F   CF+S+VR  ++  GGL  LQ  +L 
Sbjct: 8   SNRVQVLGLYGMGGIGKTTLAKAFYNKLINHFVLRCFISNVREIADKDGGLISLQNILLG 67

Query: 64  TTLSEKLEVAGPNIPHFT-KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
                +  V   +      K ++   ++L VLDDV++V QL  L G  D FG+GS+I++T
Sbjct: 68  DLFPSEQPVYDVDAGSIALKRKLHEKRVLAVLDDVDDVSQLNALAGSRDWFGEGSQIIIT 127

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           TR+K VL        ++Y V  L   EA + F   A +     +D    S+ +VS T   
Sbjct: 128 TRNKDVL--IGQVVNELYEVQELFASEALQLFSYLALRREKPTDDYLNLSKQIVSLTGAL 185

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL LEV GS L  KR     +    L ++ +   H++ D+L+ISF+ L   VK  FLD+A
Sbjct: 186 PLALEVFGSFLLHKRTVKQRE--DALKKLQQIRPHNLQDVLRISFDGLDEEVKCAFLDVA 243

Query: 243 CFFEGED--KDFVASILDD---SESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIVR 296
           C F   +  K+    IL         V+++L  KSL+ I  +  L MHD L++MGRQIV+
Sbjct: 244 CLFVNSEIKKEEAIDILMGCGFRAHTVMNVLTAKSLIKIREDCTLWMHDQLRDMGRQIVQ 303

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
            E   +PG+RSRLWD  EI        GT  ++GI LD  K + +  D  A T + N  L
Sbjct: 304 LEDLVDPGRRSRLWDHNEIV------TGTKEVQGIILDFRKKRHVE-DLSADTILLNNFL 356

Query: 357 ---------------FKFYV------PKFYEIEKLPSMSTEE----------QLSYSKVQ 385
                          FK Y+       +  E+E+ P + TE           Q++Y+K  
Sbjct: 357 TTPNLTSALAYVKEKFKMYLLFLCGLQRAAEVEE-PKLGTEVFESMVNMRLLQINYAK-- 413

Query: 386 LPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQ 445
           L     Y P  L++L W    L+ LPS++ P  L   +L  S +E+ W     C  + + 
Sbjct: 414 LEGKFKYFPAGLKWLQWKGCALKFLPSDYSPWQLAVPDLSESGIERLW----GCTGNKVA 469

Query: 446 NFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIE 505
             + L  ++  GC  L + P    +     +N   C+ L +  +  G             
Sbjct: 470 --ESLRVINLHGCYILLTTPDLSGYKSLEKLNLEPCIRLTKIDKSLG------------- 514

Query: 506 EVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHL 565
                          +LR C  +         L+ L  L+L  C  L+  PE +  M  L
Sbjct: 515 ---------------NLRECSNIVEFPRDVSGLKHLQILVLSDCTKLKELPEDIGNMNSL 559

Query: 566 KRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
           + + +D T I +LP S  +L   E L ++DC  +  LP +IG+L
Sbjct: 560 RELLADGTAIPKLPESIYHLTKPEKLSLKDCQSIKQLPKSIGNL 603


>gi|297794741|ref|XP_002865255.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311090|gb|EFH41514.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1260

 Score =  257 bits (656), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 227/753 (30%), Positives = 358/753 (47%), Gaps = 112/753 (14%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ VGIWGM GIGKTTLAKA+FDQ S  F+ SCF+ D        G    L++Q+     
Sbjct: 170 IRCVGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKAFHEKGLYCLLEEQLFKENP 229

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
                +   +     ++R+   ++L+VLDDV      +  +   D  G GS I++T+RDK
Sbjct: 230 GNDATIMKLS---SLRDRLNSKRVLVVLDDVRNALVAESFLEGFDWLGPGSLIIITSRDK 286

Query: 127 RVLEKFR-GEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
           +V   FR     +IY V GL  +EA + F   A   +   ++L+  S  VV+Y  GNPL 
Sbjct: 287 QV---FRLCGINQIYEVQGLNEKEALQLFLLCA---SMGEQNLHELSMKVVNYANGNPLA 340

Query: 186 LEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
           + V G  L  K+K S        L R        I+D  K S++ L    K+IFLDIACF
Sbjct: 341 ISVYGRELKGKKKLSEMETAFLKLKR---RPPFKIFDAFKSSYDSLCDNEKNIFLDIACF 397

Query: 245 FEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F+GE+ ++V  +L+         +D+L++K LV+IS N + +H++ Q++GR+I+  E+  
Sbjct: 398 FQGENVNYVIQLLEGCGFFPHVEIDVLVEKCLVTISENRVWLHNLTQDVGREIINGET-V 456

Query: 302 EPGKRSRLWDPKEISRVLKHN---------------KGTDAIEGIFLDLSKIKGINLDPR 346
           +  +R RLW+P  I  +L++N               +G+D IEG+FLD S ++  ++ P 
Sbjct: 457 QIERRRRLWEPWSIKYLLEYNEHKACGEPKTTFKRTQGSDEIEGMFLDTSNLR-FDVQPS 515

Query: 347 AFTNMSNLRLFKFYV--PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT 404
           AF NM NL+L K Y   P+ + +   P  S               L  LP +LR LHW+ 
Sbjct: 516 AFKNMLNLKLLKIYCSNPEVHPVINFPKGS---------------LHSLPNELRLLHWEN 560

Query: 405 YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSF 464
           YPL++LP +F P +LVE+N+  S++++ W G K        N + L  +     Q L   
Sbjct: 561 YPLQSLPQSFDPWHLVEINMPYSQLQKLWGGTK--------NLEMLRTIRLCHSQHLVDI 612

Query: 465 PSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL-YLGQSAIEEVPSSIECLTDLEVLDLR 523
                      I+   C  L  FP  +G++ RL  +  S   E+ S +E   ++E L L+
Sbjct: 613 DDLFKAQNLEVIDLQGCTRLQNFPA-AGQLLRLRVVNLSGCIEIKSVLEMPPNIETLHLQ 671

Query: 524 GCKRLK-RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
           G   L   +ST     R LV         L   P + E ++ L+R+ S     +      
Sbjct: 672 GTGILAFPVSTVKPNRRELVNF-------LTEIPGLSEALK-LERLTSLLESSSSC---- 719

Query: 583 ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSH 642
           ++L  L  L ++DCS L +LP+           L+  S ++                   
Sbjct: 720 QDLGKLICLELKDCSCLQSLPNMANLDLLNLLDLSGCSRLN------------------- 760

Query: 643 CKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQ 702
              ++ FPR        +  L++   A++E+PQ      SLE+L   G+   SLP     
Sbjct: 761 --SIQGFPR-------FLKKLYLGGTAIKEVPQ---LPQSLELLNARGSCLRSLP----N 804

Query: 703 MSQLRFIHLEDFNM---LQSLPELPLCLKYLHL 732
           M+ L F+ + D +    L+++   P  LK L+ 
Sbjct: 805 MANLEFLKVLDLSGCSELETIQGFPRNLKELYF 837



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 4/85 (4%)

Query: 219  IYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVS 275
            + ++L++S++ L    K +FL I+  F  ED D VA ++   + DV   L +L D SL+S
Sbjct: 1052 VKEVLRVSYDDLQEMDKVLFLYISSLFNDEDVDLVAPLIAGIDLDVSSGLKVLADVSLIS 1111

Query: 276  ISGNF-LNMHDILQEMGRQIVRQES 299
            IS N  + MH ++++MG++I+ ++S
Sbjct: 1112 ISSNGEIVMHCLVRQMGKEILHEQS 1136



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 123/300 (41%), Gaps = 46/300 (15%)

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQ 624
           L+ ++ +  P+  LP SF+    +E+      S+L  L     +LE L  I    S    
Sbjct: 553 LRLLHWENYPLQSLPQSFDPWHLVEINM--PYSQLQKLWGGTKNLEMLRTIRLCHSQHLV 610

Query: 625 LPSSVALSNMLRSLDSSHCKGLESFPRTF-LLGLSAMGLLH-ISDYAVREIPQEIAYLSS 682
               +  +  L  +D   C  L++FP    LL L  + L   I   +V E+P  I     
Sbjct: 611 DIDDLFKAQNLEVIDLQGCTRLQNFPAAGQLLRLRVVNLSGCIEIKSVLEMPPNI----- 665

Query: 683 LEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY------------- 729
            E L+L G    + P     +S ++    E  N L  +P L   LK              
Sbjct: 666 -ETLHLQGTGILAFP-----VSTVKPNRRELVNFLTEIPGLSEALKLERLTSLLESSSSC 719

Query: 730 --------LHLIDCKMLQSLPVLPFCLESLDL--TGCNMLRSLPELPLCLQYLNLEDCNM 779
                   L L DC  LQSLP +        L  +GC+ L S+   P  L+ L L     
Sbjct: 720 QDLGKLICLELKDCSCLQSLPNMANLDLLNLLDLSGCSRLNSIQGFPRFLKKLYLGG-TA 778

Query: 780 LRSLPELPLCLQLLTVRNCNRLQSLPEI--LLCLQELDASVLEKLSKHSPDLQWAPESLK 837
           ++ +P+LP  L+LL  R  + L+SLP +  L  L+ LD S   +L      +Q  P +LK
Sbjct: 779 IKEVPQLPQSLELLNARG-SCLRSLPNMANLEFLKVLDLSGCSELET----IQGFPRNLK 833


>gi|280967725|gb|ACZ98531.1| ARGH17 [Malus x domestica]
          Length = 1056

 Score =  257 bits (656), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 229/791 (28%), Positives = 372/791 (47%), Gaps = 146/791 (18%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S+ V++VGIWGMGG+GKTT+AKAI++Q    F+   F++DVR ++ +  GL  LQ +++
Sbjct: 226 GSNDVRMVGIWGMGGVGKTTVAKAIYNQIHPMFQFKSFLADVR-DATSKHGLVDLQNKLI 284

Query: 63  STTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
           S  L +K E++  +      K++ R  ++L+++D+++EV QL  ++G  D FG GSRI++
Sbjct: 285 SDILKKKPEISCVDEGIVMIKQQFRHKRVLVIMDNIDEVEQLDAIVGNHDWFGPGSRIIL 344

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRD+ +L+  RG+   IY        EA E F   AF  N CP +  +H  S   +   
Sbjct: 345 TTRDEHLLK--RGKVHNIYPAQKFNEGEALELFSWHAFG-NGCP-NKGYHELSKKVF--- 397

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
                      L  +  + W   L  L R  + +I      L+ISF+ L  + K+IFLDI
Sbjct: 398 -----------LLWRTMAEWKSQLEKLERTPDGKI---ITPLRISFDGLDDKQKAIFLDI 443

Query: 242 ACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
           +CFF G DKD VA  LD    S +  + IL ++ LV++    LN+HD+L+EM + I+ ++
Sbjct: 444 SCFFIGMDKDNVAKALDVCGFSATIEISILRERCLVTVEDKKLNVHDLLREMAKVIISEK 503

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
           S   P K SRLW+ +E+  VL++  GT+ +EG+ L           P +  N S      
Sbjct: 504 SPGHPEKWSRLWNHQEVVDVLRNKSGTEEVEGLALH---------KPFSHDNSS------ 548

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF--KP 416
                 +  E   +M     L   KV+L     +LPK+L +L W+   L+++P +F  +P
Sbjct: 549 ------FNTEAFANMKKLRLLLLYKVELNGEYKHLPKELMWLRWEECLLKSIPDDFFNQP 602

Query: 417 KNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI 476
           + LV L ++ S + Q WEG K     S+QN K                           I
Sbjct: 603 R-LVVLEMQRSYLVQVWEGSK-----SLQNLK--------------------------II 630

Query: 477 NFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFC 536
           + +   +LI+ P  S              +VP+  E +  LE  +  GC+ L  +   F 
Sbjct: 631 DLTRSYSLIKSPDFS--------------QVPNLEELI--LEGCESLGCRMLTSLPRDFY 674

Query: 537 KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
           K +S+ TL L  C       E L +M  L+ + +D T I ++P+S   L           
Sbjct: 675 KSKSVETLCLNDCSEFREVHEDLGEMISLRILEADFTAIRQIPTSIVRLK---------- 724

Query: 597 SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
                   N+  L  +  I    S++  +   + L N LR L  S CK            
Sbjct: 725 --------NLTRLSLINPIFRRGSSLIGV-EGIHLPNSLRELSLSVCK------------ 763

Query: 657 LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM 716
                   + D A++     +  L SL+ L L  N F +LP+ +  +S+L  + L     
Sbjct: 764 --------LDDDAIK----NLGSLISLQYLDLGWNKFHTLPS-LSGLSKLETLQLSGCMY 810

Query: 717 LQSLPELPLCLKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSLPELPLCLQ---Y 771
           L ++P+L   LK LH+ +C  L+++P       +  L ++    L  +P L   L    +
Sbjct: 811 LHTIPDLLTNLKVLHVDECPALETMPNFSEMSNIRQLHVSHSPKLTEVPSLDKSLNSMIW 870

Query: 772 LNLEDCNMLRS 782
           +++ +C  L +
Sbjct: 871 IDMHECTNLTA 881



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 188/492 (38%), Gaps = 83/492 (16%)

Query: 575  ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY-------YILAAASAISQLPS 627
            +  +P  F N P L VL ++  S L  + +   SL+ L        Y L  +   SQ+P+
Sbjct: 591  LKSIPDDFFNQPRLVVLEMQR-SYLVQVWEGSKSLQNLKIIDLTRSYSLIKSPDFSQVPN 649

Query: 628  SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILY 687
               L  +L   +S  C+ L S PR F    S   L        RE+ +++  + SL IL 
Sbjct: 650  LEEL--ILEGCESLGCRMLTSLPRDFYKSKSVETLCLNDCSEFREVHEDLGEMISLRILE 707

Query: 688  LSGNNFESLPAII---KQMSQLRFIH-----------LEDFNMLQSLPELPLCLKYLHLI 733
                    +P  I   K +++L  I+           +E  ++  SL EL L +  L   
Sbjct: 708  ADFTAIRQIPTSIVRLKNLTRLSLINPIFRRGSSLIGVEGIHLPNSLRELSLSVCKLDDD 767

Query: 734  DCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC--LQYLNLEDCNMLRSLPELPLCLQ 791
              K L SL      L+ LDL G N   +LP L     L+ L L  C  L ++P+L   L+
Sbjct: 768  AIKNLGSL----ISLQYLDL-GWNKFHTLPSLSGLSKLETLQLSGCMYLHTIPDLLTNLK 822

Query: 792  LLTVRNCNRLQSLPEI--LLCLQELDASVLEKLSKHSPDLQWAPESLKS--AAICFEFTN 847
            +L V  C  L+++P    +  +++L  S       HSP L   P   KS  + I  +   
Sbjct: 823  VLHVDECPALETMPNFSEMSNIRQLHVS-------HSPKLTEVPSLDKSLNSMIWIDMHE 875

Query: 848  CLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFS 907
            C  L       IL             S   G                I L G+ +PDWF 
Sbjct: 876  CTNLTADFRKNIL---------QGWTSCGFGG---------------IALHGNYVPDWFE 911

Query: 908  NQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETK 967
              + G+ +   +PP +  R   G     +          +R F  +    LEI  ++ T 
Sbjct: 912  FVNEGAKVSFDIPP-THDRTFEGLTLFFL----------YRPFKATILNPLEITVINNTM 960

Query: 968  HVDLG--YNSR--YIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATFK--FFAERKFYKI 1021
              +L    N+R   I   +D D  +   +   N     G       FK  ++A     K+
Sbjct: 961  CTELRAYVNNRGSLINTFVDGDEYLWQVQLSNNELNLQGGDKVDILFKDEYYARNNALKM 1020

Query: 1022 KRCGLCPVYANP 1033
             R G+  V+  P
Sbjct: 1021 MRIGVNLVWDKP 1032


>gi|30683875|ref|NP_849398.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658427|gb|AEE83827.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1404

 Score =  257 bits (656), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 247/909 (27%), Positives = 413/909 (45%), Gaps = 157/909 (17%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQKQML 62
            S   ++VGIWG  GIGK+T+ +A+F Q S +F    F++      S+ +G     +K++L
Sbjct: 206  SKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPLRAFLTYKSTSGSDVSGMKLSWEKELL 265

Query: 63   STTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            S  L +K       I HF   ++R++  K+LI+LDDV+ +  LK L+G+ + FG GSRI+
Sbjct: 266  SEILGQK----DIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRII 321

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            V T+D++ L+    +   +Y V       A    C  AF ++  P+D    +  V     
Sbjct: 322  VITQDRQFLKAH--DIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDDFKELAFEVAKLAG 379

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
              PL L VLGSSL  + K  W +++  L         DI   L++S+++L  + + +FL 
Sbjct: 380  HLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGLNG---DIMKTLRVSYDRLHQKDQDMFLC 436

Query: 241  IACFFEGEDKDFVASILDDSESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQES 299
            IAC F G +  +V  +L+D+    L +L +KSL+ I+    + MH++L+++GR+I R +S
Sbjct: 437  IACLFNGFEVSYVKDLLEDNVG--LTMLSEKSLIRITPDGHIEMHNLLEKLGREIDRAKS 494

Query: 300  EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGI---FLDLSKIKGINLDPRAFTNMSNLRL 356
            +  PGKR  L + ++I  V+    GT+ + GI   F +    + + +D  +F  M NL+ 
Sbjct: 495  KGNPGKRQFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFSTRPLLIDKESFKGMRNLQY 554

Query: 357  FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
             K                      +S    P  L YLP KLR L WD  PL++LPS FK 
Sbjct: 555  LKIG-------------------DWSDGGQPQSLVYLPLKLRLLDWDDCPLKSLPSTFKA 595

Query: 417  KNLVELNLRCSKVEQPWEG-------EKACVPSS--------IQNFKYLSALSFKGCQSL 461
            + LV L ++ SK+E+ WEG       +K  +  S        + N + L  L  +GC+SL
Sbjct: 596  EYLVNLIMKYSKLEKLWEGTLPLGSLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESL 655

Query: 462  RSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ--SAIEEVPSSIECLTDLEV 519
             + PS++     +       V LI+   + G     YL    S +E     +   + L +
Sbjct: 656  VTLPSSIQNAIKLRKLHCSGVILIDLKSLEGMCNLEYLSVDCSRVEGTQGIVYFPSKLRL 715

Query: 520  LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP 579
            L    C  LKR+ ++F                         K+E+L ++  + + + +L 
Sbjct: 716  LLWNNCP-LKRLHSNF-------------------------KVEYLVKLRMENSDLEKLW 749

Query: 580  SSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
               + L  L+ +F+     L  +PD   ++      +    ++   PSS+  +  L  LD
Sbjct: 750  DGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLD 809

Query: 640  SSHCKGLESFPRTFLLGLSAMGLLHISD-------------------------------Y 668
             S CK LESFP    L L ++  L+++                                +
Sbjct: 810  ISDCKKLESFPTD--LNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCF 867

Query: 669  AVREIPQEIAYLSSL-----------EILYLSGNNF--ESLPAIIKQMSQLRFIHLEDFN 715
              + +P  + YL  L            +++L+   +  E L   I+ +  L  + L +  
Sbjct: 868  WNKNLPAGLDYLDCLMRCMPCEFRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMDLSESE 927

Query: 716  MLQSLPELPLC--LKYLHLIDCKMLQSLP---------------------VLPF-----C 747
             L  +P+L     LK+L+L +CK L +LP                     VLP       
Sbjct: 928  NLTEIPDLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDVNLSS 987

Query: 748  LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQL--LTVRNCNRLQSLP 805
            LE+LDL+GC+ LR+ P +   +++L LE+   +  + +L    +L  L + NC  L +LP
Sbjct: 988  LETLDLSGCSSLRTFPLISKSIKWLYLEN-TAIEEILDLSKATKLESLILNNCKSLVTLP 1046

Query: 806  EILLCLQEL 814
              +  LQ L
Sbjct: 1047 STIGNLQNL 1055



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 177/733 (24%), Positives = 297/733 (40%), Gaps = 151/733 (20%)

Query: 333  LDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSY--SKVQLPNGL 390
            LDL   + +   P +  N   LR          +++ L  M   E LS   S+V+   G+
Sbjct: 647  LDLEGCESLVTLPSSIQNAIKLRKLHCSGVILIDLKSLEGMCNLEYLSVDCSRVEGTQGI 706

Query: 391  DYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK------------- 437
             Y P KLR L W+  PL+ L SNFK + LV+L +  S +E+ W+G +             
Sbjct: 707  VYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGS 766

Query: 438  --------------------------ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
                                         PSS+QN   L  L    C+ L SFP++L+  
Sbjct: 767  KYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLDISDCKKLESFPTDLNLE 826

Query: 472  CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEV---LDLRGCKRL 528
                +N + C NL  FP I    + +   +   E V    +C  +  +   LD   C  L
Sbjct: 827  SLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVE--DCFWNKNLPAGLDYLDC--L 882

Query: 529  KRISTSFCKLR-SLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLP 586
             R     C+ R   +  + + C   E   E ++ +  L+ +  S+   +TE+P       
Sbjct: 883  MRCMP--CEFRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMDLSESENLTEIP-DLSKAT 939

Query: 587  GLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKG 645
             L+ L++ +C  L  LP  IG+L+ L  + +   + +  LP+ V LS+ L +LD S C  
Sbjct: 940  NLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDVNLSS-LETLDLSGCSS 998

Query: 646  LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMS 704
            L +FP    L   ++  L++ + A+ EI  +++  + LE L L+   +  +LP+ I  + 
Sbjct: 999  LRTFP----LISKSIKWLYLENTAIEEI-LDLSKATKLESLILNNCKSLVTLPSTIGNLQ 1053

Query: 705  QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE 764
             LR ++++    L+ LP            D   L SL +       LDL+GC+ LR+ P 
Sbjct: 1054 NLRRLYMKRCTGLEVLP-----------TDVN-LSSLGI-------LDLSGCSSLRTFPL 1094

Query: 765  LPLCLQYLNLEDCNMLRSLPELPLC------LQLLTVRNCNRLQSLPEILLCLQEL---- 814
            +   + +L LE+     ++ E+P C      L++L +  C RL+++   +  L+ L    
Sbjct: 1095 ISTNIVWLYLENT----AIGEVPCCIEDFTRLRVLLMYCCQRLKNISPNIFRLRSLMFAD 1150

Query: 815  ------------DASVLEKLSKH------SPDLQWAPESLKS----------AAICFEFT 846
                        DA+V+  +         S ++++  E                  F F 
Sbjct: 1151 FTDCRGVIKALSDATVVATMEDSVSCVPLSENIEYTCERFWGELYGDGDWDLGTEYFSFR 1210

Query: 847  NCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWF 906
            NC KL+  A   IL                                  + LPG EIP +F
Sbjct: 1211 NCFKLDRDARELILRSCF----------------------------KPVALPGGEIPKYF 1242

Query: 907  SNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQF-DLEIKTLSE 965
            + ++ G S+ + LP  S  ++ + F  C V+D        +RY      F D+E K    
Sbjct: 1243 TYRAYGDSLTVTLPRSSLSQSFLRFKACLVVDPLSEGKGFYRYLESEMTFNDVEFKFCCS 1302

Query: 966  TKHVDLGYNSRYI 978
             +  + G    Y+
Sbjct: 1303 NRIKECGVRLMYV 1315



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 162/383 (42%), Gaps = 93/383 (24%)

Query: 326  DAIEGIFLDLSKIK-------GINLDPRAFTNMS---NLRLFKFYVPKFYEIEKLPSMST 375
            +AI+ I+LD+S  K        +NL+   + N++   NLR F        +++  P    
Sbjct: 801  NAIKLIYLDISDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVD-FPEGRN 859

Query: 376  E---EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
            E   E   ++K  LP GLDYL             +R +P  F+P+ LV LN+RC K E+ 
Sbjct: 860  EIVVEDCFWNK-NLPAGLDYL----------DCLMRCMPCEFRPEYLVFLNVRCYKHEKL 908

Query: 433  WEGEKA---------------------------------------CVPSSIQNFKYLSAL 453
            WEG ++                                        +PS+I N + L  L
Sbjct: 909  WEGIQSLGSLEEMDLSESENLTEIPDLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRL 968

Query: 454  SFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIEC 513
              K C  L   P++++     T++ S C +L  FP IS  +  LYL  +AIEE+      
Sbjct: 969  EMKECTGLEVLPTDVNLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEI------ 1022

Query: 514  LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT 573
                  LDL    +L+ +  + CK  SLVTL           P  +  +++L+R+Y  R 
Sbjct: 1023 ------LDLSKATKLESLILNNCK--SLVTL-----------PSTIGNLQNLRRLYMKRC 1063

Query: 574  PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSN 633
               E+  +  NL  L +L +  CS L   P    ++ +LY      +AI ++P  +    
Sbjct: 1064 TGLEVLPTDVNLSSLGILDLSGCSSLRTFPLISTNIVWLYL---ENTAIGEVPCCIEDFT 1120

Query: 634  MLRSLDSSHCKGLESF-PRTFLL 655
             LR L    C+ L++  P  F L
Sbjct: 1121 RLRVLLMYCCQRLKNISPNIFRL 1143



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 31/252 (12%)

Query: 317  RVLKHNKGTDAIEGIF----LDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
            R  KH K  + I+ +     +DLS+ + +   P   +  +NL+    Y+     +  LPS
Sbjct: 901  RCYKHEKLWEGIQSLGSLEEMDLSESENLTEIP-DLSKATNLK--HLYLNNCKSLVTLPS 957

Query: 373  -MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY------PLRTLPSNFKPKNLVELNLR 425
             +   ++L   +++   GL+ LP  +     +T        LRT P     K++  L L 
Sbjct: 958  TIGNLQKLVRLEMKECTGLEVLPTDVNLSSLETLDLSGCSSLRTFP--LISKSIKWLYLE 1015

Query: 426  CSKVEQPWEGEKAC---------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
             + +E+  +  KA                +PS+I N + L  L  K C  L   P++++ 
Sbjct: 1016 NTAIEEILDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDVNL 1075

Query: 471  VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                 ++ S C +L  FP IS  +  LYL  +AI EVP  IE  T L VL +  C+RLK 
Sbjct: 1076 SSLGILDLSGCSSLRTFPLISTNIVWLYLENTAIGEVPCCIEDFTRLRVLLMYCCQRLKN 1135

Query: 531  ISTSFCKLRSLV 542
            IS +  +LRSL+
Sbjct: 1136 ISPNIFRLRSLM 1147


>gi|357480743|ref|XP_003610657.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355511992|gb|AES93615.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1128

 Score =  257 bits (656), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 217/735 (29%), Positives = 338/735 (45%), Gaps = 116/735 (15%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           + D  +++GI GMGGIGKTTL   ++D+ S++F   CF+ +V       GG   +QKQ+L
Sbjct: 216 ADDGFRVLGIRGMGGIGKTTLVTVLYDKISYQFHACCFIENV-SKIYRDGGCVAVQKQIL 274

Query: 63  STTLSEK-LEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             T+ EK LE   P+ I    + R+  +KLL+VLDD++++ QL+ L         GSRI+
Sbjct: 275 HQTIREKNLEAYSPSEISRIVRNRLHNIKLLVVLDDIDQIEQLQELHINPKLLCGGSRII 334

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRD+ +L+++  +   +Y    +   EA +     AFK ++          S  ++++
Sbjct: 335 ITTRDEHILKQYGAD--VVYEAQLMSDSEALDLLHRKAFKSDN----------SSSTFSE 382

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
             P                 W   L  L R   S    I  +L+ISF  L PR + IFL 
Sbjct: 383 LIP----------------QWRATLDGL-RNNPSLDKRIMTVLRISFEGLEPREREIFLH 425

Query: 241 IACFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
           IACFF+GE  D+V  ILD      D+ + ++ +KSL++I  N ++MH +LQE+GRQIV+ 
Sbjct: 426 IACFFKGEKADYVRGILDACGLHPDIGIPLIAEKSLITIRNNEIHMHGMLQELGRQIVQG 485

Query: 298 ESEKEPGKRSRLWDPKEISRV-LKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
           +   EP   SRLW  ++  RV +   K    ++ I LD  K  G   +     ++S L  
Sbjct: 486 QHPNEPEFWSRLWLYRDFHRVMMTEMKAPIEVKAIVLD-QKEDGSEFNKLRAEDLSKLGH 544

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
            K  +         P                    +L   L YL W+ +P  +LPSN + 
Sbjct: 545 LKLLILCHKNFSGEPI-------------------FLSNSLCYLSWNGFPFDSLPSNIQL 585

Query: 417 KNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI 476
            +LVELN+  S ++Q WEG        IQ    L  +     ++LR+ PS         I
Sbjct: 586 HDLVELNMPDSNIKQLWEG--------IQRLPCLKRMDLSNSKNLRTTPSFEGIQNLERI 637

Query: 477 NFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS-TSF 535
           +F+ C+NL+                    +V  S+  LT+L  L L+ C  L  +   S 
Sbjct: 638 DFTGCINLL--------------------QVHPSVGLLTELVFLSLQNCTNLTCLDFGSV 677

Query: 536 CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
            ++ SL  L L GC+ L + P+                        F     LE L +E 
Sbjct: 678 SRVWSLRVLRLSGCIGLRNTPD------------------------FTVAANLEYLDMER 713

Query: 596 CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM--LRSLDSSHCKGLESFPRTF 653
           C  L  +  +IG+L  L + L+        P S    NM  L +LD   C    + P   
Sbjct: 714 CINLSKIDKSIGTLTKLRF-LSLRHCTKLFPISNIFDNMTSLTTLDLCECWNFTTLPLPT 772

Query: 654 LLG----LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
            +     L ++  L +S   +  +P  I  L SLE L L GN+F +LP+  K+++ L ++
Sbjct: 773 TVNSPSPLESLIFLDLSFCNISVLPDSIGKLKSLERLNLQGNHFTTLPSTFKRLANLAYL 832

Query: 710 HLEDFNMLQSLPELP 724
           +L   + L+ LP+LP
Sbjct: 833 NLSHCHRLKRLPKLP 847


>gi|30683870|ref|NP_193428.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658426|gb|AEE83826.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1449

 Score =  256 bits (655), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 247/909 (27%), Positives = 413/909 (45%), Gaps = 157/909 (17%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQKQML 62
            S   ++VGIWG  GIGK+T+ +A+F Q S +F    F++      S+ +G     +K++L
Sbjct: 206  SKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPLRAFLTYKSTSGSDVSGMKLSWEKELL 265

Query: 63   STTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
            S  L +K       I HF   ++R++  K+LI+LDDV+ +  LK L+G+ + FG GSRI+
Sbjct: 266  SEILGQK----DIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRII 321

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            V T+D++ L+    +   +Y V       A    C  AF ++  P+D    +  V     
Sbjct: 322  VITQDRQFLKAH--DIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDDFKELAFEVAKLAG 379

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
              PL L VLGSSL  + K  W +++  L         DI   L++S+++L  + + +FL 
Sbjct: 380  HLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGLNG---DIMKTLRVSYDRLHQKDQDMFLC 436

Query: 241  IACFFEGEDKDFVASILDDSESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQES 299
            IAC F G +  +V  +L+D+    L +L +KSL+ I+    + MH++L+++GR+I R +S
Sbjct: 437  IACLFNGFEVSYVKDLLEDNVG--LTMLSEKSLIRITPDGHIEMHNLLEKLGREIDRAKS 494

Query: 300  EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGI---FLDLSKIKGINLDPRAFTNMSNLRL 356
            +  PGKR  L + ++I  V+    GT+ + GI   F +    + + +D  +F  M NL+ 
Sbjct: 495  KGNPGKRQFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFSTRPLLIDKESFKGMRNLQY 554

Query: 357  FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
             K                      +S    P  L YLP KLR L WD  PL++LPS FK 
Sbjct: 555  LKIG-------------------DWSDGGQPQSLVYLPLKLRLLDWDDCPLKSLPSTFKA 595

Query: 417  KNLVELNLRCSKVEQPWEG-------EKACVPSS--------IQNFKYLSALSFKGCQSL 461
            + LV L ++ SK+E+ WEG       +K  +  S        + N + L  L  +GC+SL
Sbjct: 596  EYLVNLIMKYSKLEKLWEGTLPLGSLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESL 655

Query: 462  RSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ--SAIEEVPSSIECLTDLEV 519
             + PS++     +       V LI+   + G     YL    S +E     +   + L +
Sbjct: 656  VTLPSSIQNAIKLRKLHCSGVILIDLKSLEGMCNLEYLSVDCSRVEGTQGIVYFPSKLRL 715

Query: 520  LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP 579
            L    C  LKR+ ++F                         K+E+L ++  + + + +L 
Sbjct: 716  LLWNNCP-LKRLHSNF-------------------------KVEYLVKLRMENSDLEKLW 749

Query: 580  SSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
               + L  L+ +F+     L  +PD   ++      +    ++   PSS+  +  L  LD
Sbjct: 750  DGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLD 809

Query: 640  SSHCKGLESFPRTFLLGLSAMGLLHISD-------------------------------Y 668
             S CK LESFP    L L ++  L+++                                +
Sbjct: 810  ISDCKKLESFPTD--LNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCF 867

Query: 669  AVREIPQEIAYLSSL-----------EILYLSGNNF--ESLPAIIKQMSQLRFIHLEDFN 715
              + +P  + YL  L            +++L+   +  E L   I+ +  L  + L +  
Sbjct: 868  WNKNLPAGLDYLDCLMRCMPCEFRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMDLSESE 927

Query: 716  MLQSLPELPLC--LKYLHLIDCKMLQSLP---------------------VLPF-----C 747
             L  +P+L     LK+L+L +CK L +LP                     VLP       
Sbjct: 928  NLTEIPDLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDVNLSS 987

Query: 748  LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQL--LTVRNCNRLQSLP 805
            LE+LDL+GC+ LR+ P +   +++L LE+   +  + +L    +L  L + NC  L +LP
Sbjct: 988  LETLDLSGCSSLRTFPLISKSIKWLYLEN-TAIEEILDLSKATKLESLILNNCKSLVTLP 1046

Query: 806  EILLCLQEL 814
              +  LQ L
Sbjct: 1047 STIGNLQNL 1055



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 174/711 (24%), Positives = 292/711 (41%), Gaps = 150/711 (21%)

Query: 333  LDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSY--SKVQLPNGL 390
            LDL   + +   P +  N   LR          +++ L  M   E LS   S+V+   G+
Sbjct: 647  LDLEGCESLVTLPSSIQNAIKLRKLHCSGVILIDLKSLEGMCNLEYLSVDCSRVEGTQGI 706

Query: 391  DYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK------------- 437
             Y P KLR L W+  PL+ L SNFK + LV+L +  S +E+ W+G +             
Sbjct: 707  VYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGS 766

Query: 438  --------------------------ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
                                         PSS+QN   L  L    C+ L SFP++L+  
Sbjct: 767  KYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLDISDCKKLESFPTDLNLE 826

Query: 472  CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEV---LDLRGCKRL 528
                +N + C NL  FP I    + +   +   E V    +C  +  +   LD   C  L
Sbjct: 827  SLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVE--DCFWNKNLPAGLDYLDC--L 882

Query: 529  KRISTSFCKLR-SLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLP 586
             R     C+ R   +  + + C   E   E ++ +  L+ +  S+   +TE+P       
Sbjct: 883  MRCMP--CEFRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMDLSESENLTEIP-DLSKAT 939

Query: 587  GLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKG 645
             L+ L++ +C  L  LP  IG+L+ L  + +   + +  LP+ V LS+ L +LD S C  
Sbjct: 940  NLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDVNLSS-LETLDLSGCSS 998

Query: 646  LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMS 704
            L +FP    L   ++  L++ + A+ EI  +++  + LE L L+   +  +LP+ I  + 
Sbjct: 999  LRTFP----LISKSIKWLYLENTAIEEI-LDLSKATKLESLILNNCKSLVTLPSTIGNLQ 1053

Query: 705  QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE 764
             LR ++++    L+ LP            D   L SL +       LDL+GC+ LR+ P 
Sbjct: 1054 NLRRLYMKRCTGLEVLP-----------TDVN-LSSLGI-------LDLSGCSSLRTFPL 1094

Query: 765  LPLCLQYLNLEDCNMLRSLPELPLC------LQLLTVRNCNRLQSLPEILLCLQEL---- 814
            +   + +L LE+     ++ E+P C      L++L +  C RL+++   +  L+ L    
Sbjct: 1095 ISTNIVWLYLENT----AIGEVPCCIEDFTRLRVLLMYCCQRLKNISPNIFRLRSLMFAD 1150

Query: 815  ------------DASVLEKLSKH------SPDLQWAPESLKS----------AAICFEFT 846
                        DA+V+  +         S ++++  E                  F F 
Sbjct: 1151 FTDCRGVIKALSDATVVATMEDSVSCVPLSENIEYTCERFWGELYGDGDWDLGTEYFSFR 1210

Query: 847  NCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWF 906
            NC KL+  A   IL                                  + LPG EIP +F
Sbjct: 1211 NCFKLDRDARELILRSCF----------------------------KPVALPGGEIPKYF 1242

Query: 907  SNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFD 957
            + ++ G S+ + LP  S  ++ + F  C V+D        +RY  V+F F+
Sbjct: 1243 TYRAYGDSLTVTLPRSSLSQSFLRFKACLVVDPLSEGKGFYRYLEVNFGFN 1293



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 162/383 (42%), Gaps = 93/383 (24%)

Query: 326  DAIEGIFLDLSKIK-------GINLDPRAFTNMS---NLRLFKFYVPKFYEIEKLPSMST 375
            +AI+ I+LD+S  K        +NL+   + N++   NLR F        +++  P    
Sbjct: 801  NAIKLIYLDISDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVD-FPEGRN 859

Query: 376  E---EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
            E   E   ++K  LP GLDYL             +R +P  F+P+ LV LN+RC K E+ 
Sbjct: 860  EIVVEDCFWNK-NLPAGLDYL----------DCLMRCMPCEFRPEYLVFLNVRCYKHEKL 908

Query: 433  WEGEKA---------------------------------------CVPSSIQNFKYLSAL 453
            WEG ++                                        +PS+I N + L  L
Sbjct: 909  WEGIQSLGSLEEMDLSESENLTEIPDLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRL 968

Query: 454  SFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIEC 513
              K C  L   P++++     T++ S C +L  FP IS  +  LYL  +AIEE+      
Sbjct: 969  EMKECTGLEVLPTDVNLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEI------ 1022

Query: 514  LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT 573
                  LDL    +L+ +  + CK  SLVTL           P  +  +++L+R+Y  R 
Sbjct: 1023 ------LDLSKATKLESLILNNCK--SLVTL-----------PSTIGNLQNLRRLYMKRC 1063

Query: 574  PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSN 633
               E+  +  NL  L +L +  CS L   P    ++ +LY      +AI ++P  +    
Sbjct: 1064 TGLEVLPTDVNLSSLGILDLSGCSSLRTFPLISTNIVWLYL---ENTAIGEVPCCIEDFT 1120

Query: 634  MLRSLDSSHCKGLESF-PRTFLL 655
             LR L    C+ L++  P  F L
Sbjct: 1121 RLRVLLMYCCQRLKNISPNIFRL 1143



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 31/252 (12%)

Query: 317  RVLKHNKGTDAIEGIF----LDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
            R  KH K  + I+ +     +DLS+ + +   P   +  +NL+    Y+     +  LPS
Sbjct: 901  RCYKHEKLWEGIQSLGSLEEMDLSESENLTEIP-DLSKATNLK--HLYLNNCKSLVTLPS 957

Query: 373  -MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY------PLRTLPSNFKPKNLVELNLR 425
             +   ++L   +++   GL+ LP  +     +T        LRT P     K++  L L 
Sbjct: 958  TIGNLQKLVRLEMKECTGLEVLPTDVNLSSLETLDLSGCSSLRTFP--LISKSIKWLYLE 1015

Query: 426  CSKVEQPWEGEKAC---------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
             + +E+  +  KA                +PS+I N + L  L  K C  L   P++++ 
Sbjct: 1016 NTAIEEILDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDVNL 1075

Query: 471  VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                 ++ S C +L  FP IS  +  LYL  +AI EVP  IE  T L VL +  C+RLK 
Sbjct: 1076 SSLGILDLSGCSSLRTFPLISTNIVWLYLENTAIGEVPCCIEDFTRLRVLLMYCCQRLKN 1135

Query: 531  ISTSFCKLRSLV 542
            IS +  +LRSL+
Sbjct: 1136 ISPNIFRLRSLM 1147


>gi|13509207|emb|CAC35321.1| Ngc-D protein [Linum usitatissimum]
          Length = 1108

 Score =  256 bits (655), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 258/865 (29%), Positives = 413/865 (47%), Gaps = 129/865 (14%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +DSS + +I+GI GMGG+GKTTLAKA++D+ S +FE   F+ ++R       G+  LQ +
Sbjct: 227  LDSSTSEKIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENIRDTLSEKNGVSILQNK 286

Query: 61   MLSTTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            ++S  L +    A    +     ++RV R KLLIVLDDV+E  Q   ++G+L+ F   SR
Sbjct: 287  IISGILRKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQFDDVLGKLNNFSTNSR 346

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
             ++TTRD R LE    +E K++ +  +  + +   F   AF  +  P+D    S+  V  
Sbjct: 347  FLITTRDARGLELL--QEYKMFELQEMSPDHSLTLFNKHAFDVDCPPKDYAILSKEFVQA 404

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL ++V+GS L    K  W + L +  +I  +++    + LKIS+N+LT   K IF
Sbjct: 405  AAGLPLYIKVIGSLLFRMDKIFWEEKLEEFKKISPTKVQ---ERLKISYNELTHNEKQIF 461

Query: 239  LDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVS-----ISGNFLN---MHDIL 287
            LDIAC+F G  K +   + +D +      +  LI +SL+      I G+ LN   MHD +
Sbjct: 462  LDIACYFIGSQKIYPIFMWEDCDFYPESTIRSLIQRSLIKLQRSRIKGDVLNTFWMHDHI 521

Query: 288  QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA 347
             ++GR IVR+E  + P KRSR+W  K+   +LKH KGTD +E + +D+   + + L  + 
Sbjct: 522  IDLGRAIVREEKNQNPYKRSRIWSNKDAVNMLKHKKGTDCVEVLTVDMEG-EDLILTNKE 580

Query: 348  FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
            F  ++ LR  K              +S        K  LPN        LR+L  ++   
Sbjct: 581  FEKLTMLRYLK--------------VSNARLAGDFKDVLPN--------LRWLLLESCD- 617

Query: 408  RTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP-- 465
             ++PS    K LV L+L    V   W+G      + ++  + L A+S K C  L+  P  
Sbjct: 618  -SVPSGLYLKKLVRLDLHDCSVGDSWKGW-----NELKVARKLKAVSLKRCFHLKKVPDF 671

Query: 466  ---SNLHFVCPVTINFSYCVNL-------------------IEFPQISGKVTRL----YL 499
                +L F     +NF  C N+                    +  +I G++ RL    YL
Sbjct: 672  SDCGDLEF-----LNFDGCRNMRGEVDIGNFKSLRFLYISKTKITKIKGEIGRLLNLKYL 726

Query: 500  --GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPE 557
              G S+++EVP+ I  L+ LE L L      K   T    L + +TL+ +     +  P+
Sbjct: 727  SVGDSSLKEVPAGISKLSSLEFLALALTDSYKSDFTEM--LPTSLTLLYISNDTQKFCPD 784

Query: 558  ILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-L 616
                 E+L+R          LP +  NL  L VL++ D    + L   +G L+ L Y+ +
Sbjct: 785  T--SSENLQR----------LP-NLSNLINLSVLYLIDVGIGEIL--GLGELKMLEYLSI 829

Query: 617  AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD----YAVRE 672
              AS I  L     L  +L+ L    C+ L   P   L+ L+ + LL I D      +  
Sbjct: 830  GRASRIVHLDGLENLV-LLQHLRVEGCRILRKLPS--LIALTRLQLLWIQDCPLVTEING 886

Query: 673  IPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHL-------EDFNMLQSLPELP 724
            + Q    LS L+++  S     ESL +++K + +L  +            +M   L EL 
Sbjct: 887  MGQLWESLSHLKVVGCSALIGLESLHSMVK-LERLLLVGCVLTETMPPSLSMFTKLTELS 945

Query: 725  LC-LKYLHLIDCKMLQSLPVL--PFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLR 781
            LC + +    D   L++L VL   FC E +++ G + L S       L++L++E C  +R
Sbjct: 946  LCAMPWKQFPDLSNLKNLRVLCMSFCQELIEVPGLDALES-------LKWLSMEGCRSIR 998

Query: 782  SLPELPLC--LQLLTVRNCNRLQSL 804
             +P+L     L+ L V +C +L+ +
Sbjct: 999  KVPDLSGLKKLKTLDVESCIQLKEV 1023


>gi|356542397|ref|XP_003539653.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1376

 Score =  256 bits (654), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 216/697 (30%), Positives = 335/697 (48%), Gaps = 97/697 (13%)

Query: 20  KTTLAKAIFDQFSHE-FEGSCFVSDVRGNS-ETAGGLEHLQKQMLST-TLSEKLEVAGPN 76
           KTT A  ++++  H  FE + F+  VR  S E+   LE LQ ++LS   +     +   N
Sbjct: 217 KTTFAVYLYEKIRHYYFEAASFLIKVREQSKESKNHLEDLQNRLLSQLGVDTGTMIGSTN 276

Query: 77  IPHF-TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGE 135
                 K R+   ++L+VLDDV+   QL+ L G+ D FG GSRI++TTRD+ VL+   G 
Sbjct: 277 KGELEIKHRLGHRRVLLVLDDVDSKEQLELLAGKHDWFGSGSRIIITTRDEAVLD--YGV 334

Query: 136 EKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
           + K Y++  L    + E FC  AF +    ++    S   + Y KG PL L+V+GS+L  
Sbjct: 335 KVKKYKMTELNDRHSLELFCQNAFDKPEPAKNFESISHRAIGYAKGVPLALQVIGSNLKG 394

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           +    W   L    ++  ++I  +   LK+SF+ L      IFLDIACFF+GE  ++V  
Sbjct: 395 RSIEEWEIELGKYRKVPNAKIQGV---LKLSFDSLPETEMGIFLDIACFFKGEKWNYVKR 451

Query: 256 ILDDSESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
           IL  S+     +L  K L+ +  N  L MHD++Q+MGR+IVR +S   PG RSRLW  ++
Sbjct: 452 ILKASDIS-FKVLASKCLIMVDRNDCLEMHDLIQDMGREIVRNQSPSNPGDRSRLWSHED 510

Query: 315 ISRVLKHNKGTDAIEGIFLDLSKIKGIN-LDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           +  VLK + G+  IEGI L   K++ ++     AF  M NLR+      KF         
Sbjct: 511 VLEVLKKDSGSITIEGIMLHPPKLEVVDKWTDTAFEKMKNLRILIVRNTKFL-------- 562

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCS------ 427
                          G   LP KL+ L W  +P  + P  F PKN+V+  L  S      
Sbjct: 563 --------------TGPSSLPNKLQLLDWIGFPSESFPPKFDPKNIVDFKLSHSSLVSIK 608

Query: 428 ---------------------KVEQPWEGEKACV-------------PSS--IQNFKYLS 451
                                K+   +E +   V             PS+  + N  YLS
Sbjct: 609 PPQKVFQNLTFVNLSQCHFITKIPDMFEAKNLRVLTIDKCPKLEGFHPSAGHMPNLVYLS 668

Query: 452 ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT---RLYLGQSAIEEVP 508
           A     C  L SF   ++      ++F++C  L EFP++ GK+    ++++  +AIE+ P
Sbjct: 669 A---SECTMLTSFVPKMNLPYLEMLSFNFCSKLQEFPEVGGKMDKPLKIHMINTAIEKFP 725

Query: 509 SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKME----- 563
            SI  +T LE +D+  C+ LK +S SF  L  LVTL + GC  L    ++  K       
Sbjct: 726 KSICKVTGLEYVDMTTCRELKDLS-SFVSLPKLVTLKMNGCSQLAESFKMFRKSHSEANS 784

Query: 564 --HLKRIYSDRTPIT--ELPSSFENLPGLEVLFVEDCSKLDNLPDNI-GSLEYLYYILAA 618
              LK +Y  +  ++  +L    E  P LE L V   ++ ++LPD I GSL+     L+ 
Sbjct: 785 CPSLKALYLSKANLSHEDLSIILEIFPKLEYLNVSH-NEFESLPDCIKGSLQLKKLNLSF 843

Query: 619 ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
              + ++P    L + ++ +D+ +C+ L +   + LL
Sbjct: 844 CRNLKEIPE---LPSSIQRVDARYCQSLSTKSSSVLL 877


>gi|145326642|ref|NP_001077768.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|145337141|ref|NP_176562.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196019|gb|AEE34140.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196020|gb|AEE34141.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 964

 Score =  256 bits (653), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 215/663 (32%), Positives = 324/663 (48%), Gaps = 76/663 (11%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +D  D   I+GI G  GIGK+T+A+A+  + S  F+ +CF+ D+RG SE  G  ++ Q+ 
Sbjct: 40  LDYKDEALIIGISGPAGIGKSTIARALESRLSDRFQLTCFM-DLRG-SENNGLHDYGQQL 97

Query: 61  MLSTTLSEK-LEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            L   L  K L   G  I H    ++R+  +++LI+LDDV+++ QLK L  E   FG GS
Sbjct: 98  RLQEQLLAKVLNQDGTRICHLGVLQQRLSDLRVLIILDDVSDIKQLKALAKETTWFGPGS 157

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+VTT +K +L++ RG +   Y V     EEA E FC FAF+++  P      +  +  
Sbjct: 158 RIIVTTENKDLLQQ-RGID-STYHVGFPSREEALEIFCKFAFEQSSPPHAFEKLAARITH 215

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                PL L V+GSSL  K++  W  V+H   R+  +   +I D+L++ + +L    + +
Sbjct: 216 LCGNLPLGLCVMGSSLFGKKQDEWEFVVH---RLETNPGQEIDDVLRVGYERLHENDQML 272

Query: 238 FLDIACFFEGEDKDFVASIL-DDSESDV---LDILIDKSLVSI--SGNFLNMHDILQEMG 291
           FL IA FF   D+D V ++L DD   DV   L  LI+KSL+ I  +G  + MH +LQ++G
Sbjct: 273 FLHIAIFFNYRDRDLVEAMLADDGNLDVGNWLKFLINKSLIEIYRTGQIV-MHKLLQQVG 331

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDA-IEGIFLDLSKIKGINLDPRAFTN 350
           RQ +R++   EP KR  L +  EI  +L++ KGT   + GI  D S I  + +   AF  
Sbjct: 332 RQAIRRQ---EPWKRQILINANEICDLLRYEKGTSCNVSGISFDTSGISEVTICDGAFKR 388

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           + +LR    Y  +                  ++V +P  +++ P +LR LHW  YP ++L
Sbjct: 389 LHDLRFLHVYKSR--------------DDGNNRVHIPEKVEF-PPRLRLLHWAAYPSKSL 433

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
           P  F  + LVELN+R S VE+ WEG +      ++N KY+     K              
Sbjct: 434 PPTFNLECLVELNMRESLVEKLWEGTQ-----HLKNLKYMDLTESK-------------- 474

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIE---EVPSSIECLTDLEVLDLRGCKR 527
                       NL E P +S      Y      E   E+PSS   L  LE L++  C  
Sbjct: 475 ------------NLKELPDLSNATNLEYFYLDNCESLVEIPSSFAHLHKLEWLEMNNCIN 522

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
           L+ I      L S+  + + GC  L  FP I   +E L    SD T + ++P+S  +   
Sbjct: 523 LQVIPAHM-NLTSVKQVNMKGCSRLRKFPVISRHIEALD--ISDNTELEDMPASIASWCH 579

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
           L  L +    KL  L     SL +L     + + I  +P  +   + L  L  S C  L 
Sbjct: 580 LVYLDMSHNEKLQGLTQLPTSLRHLNL---SYTDIESIPDCIKALHQLEELCLSGCTRLA 636

Query: 648 SFP 650
           S P
Sbjct: 637 SLP 639



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 99/421 (23%), Positives = 166/421 (39%), Gaps = 119/421 (28%)

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSF----------------------ENLPGL 588
           N  H PE +E    L+ ++    P   LP +F                      ++L  L
Sbjct: 406 NRVHIPEKVEFPPRLRLLHWAAYPSKSLPPTFNLECLVELNMRESLVEKLWEGTQHLKNL 465

Query: 589 EVLFVEDCSKLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
           + + + +   L  LPD  N  +LEY Y  L    ++ ++PSS A  + L  L+ ++C  L
Sbjct: 466 KYMDLTESKNLKELPDLSNATNLEYFY--LDNCESLVEIPSSFAHLHKLEWLEMNNCINL 523

Query: 647 ESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQ 705
           +  P    + L+++  +++   + +R+ P    ++ +L+I        E +PA I     
Sbjct: 524 QVIPAH--MNLTSVKQVNMKGCSRLRKFPVISRHIEALDIS--DNTELEDMPASIASWCH 579

Query: 706 LRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC------LESLDLTGCNML 759
           L ++ +     LQ L +LP  L++L+L        +  +P C      LE L L+GC  L
Sbjct: 580 LVYLDMSHNEKLQGLTQLPTSLRHLNL----SYTDIESIPDCIKALHQLEELCLSGCTRL 635

Query: 760 RSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVL 819
            SLP+LP  ++ L  EDC  L S+                                    
Sbjct: 636 ASLPDLPCSIKALEAEDCESLESVS----------------------------------- 660

Query: 820 EKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGY 879
                 SP        L + +    FTNC KL G+A   I+  S                
Sbjct: 661 ------SP--------LYTPSARLSFTNCFKLGGEAREAIIRRS---------------- 690

Query: 880 EMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDS 939
                   S+  GS ++LPG E+P  F +++ G+S+ I LP   + +    F  C V+  
Sbjct: 691 --------SDSTGS-VLLPGREVPAEFDHRAQGNSLSILLPLGGNSQ----FMVCVVISP 737

Query: 940 K 940
           +
Sbjct: 738 R 738



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 14/234 (5%)

Query: 510 SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY 569
           ++ECL +L + +      ++++      L++L  + L    NL+  P+ L    +L+  Y
Sbjct: 438 NLECLVELNMRE----SLVEKLWEGTQHLKNLKYMDLTESKNLKELPD-LSNATNLEYFY 492

Query: 570 SDR-TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSS 628
            D    + E+PSSF +L  LE L + +C  L  +P ++         +   S + + P  
Sbjct: 493 LDNCESLVEIPSSFAHLHKLEWLEMNNCINLQVIPAHMNLTSVKQVNMKGCSRLRKFP-- 550

Query: 629 VALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL-SSLEILY 687
             +S  + +LD S    LE  P +     S   L+++ D +  E  Q +  L +SL  L 
Sbjct: 551 -VISRHIEALDISDNTELEDMPASIA---SWCHLVYL-DMSHNEKLQGLTQLPTSLRHLN 605

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           LS  + ES+P  IK + QL  + L     L SLP+LP  +K L   DC+ L+S+
Sbjct: 606 LSYTDIESIPDCIKALHQLEELCLSGCTRLASLPDLPCSIKALEAEDCESLESV 659


>gi|297791241|ref|XP_002863505.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309340|gb|EFH39764.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1137

 Score =  256 bits (653), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 212/702 (30%), Positives = 341/702 (48%), Gaps = 96/702 (13%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
            +I+G++GM GIGKTTL K +F ++  +F     V  +R  SE +          L TTL
Sbjct: 199 TRIIGVFGMPGIGKTTLLKELFKKWKPKFIRHSLVDQIRRKSEDSS-------VCLPTTL 251

Query: 67  SEKL--EVAGPNIP------HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
             +L   +A P I       +  K+ + + K+L++LDDV+   Q+  L+G LD   +GS+
Sbjct: 252 LGELLTSLADPRIDNDEDPYNMYKDELLKRKVLVILDDVSTRKQIDALLGRLDWIKKGSK 311

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           IV+ T D  +     G     Y V  L   ++ + F ++    +   +D    S   V Y
Sbjct: 312 IVIATSDMSLT---NGLVDDTYMVQKLNHRDSLQVF-HYHASVDKSKDDFMKLSEEFVHY 367

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
           ++G+ L L+VLG  L  +   +W   L  L    +S I     + K+S+++L+   K  F
Sbjct: 368 SRGHSLALKVLGGDLKKQNIDYWNDKLKTLT---QSPIP--RRVFKVSYDELSSEQKDAF 422

Query: 239 LDIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
           LDIAC F   D +++ S+L  S +  ++ L D  L++     + MHD+L  + R++  + 
Sbjct: 423 LDIAC-FRSHDVEYIESLL-ASSTGAVEALSDMCLINTCDGRVEMHDLLYTLSRELDPKA 480

Query: 299 SEKEPG-KRSRLWDPKEISR-----VLKHN--KGTDAIEGIFLDLSKIKG-INLDPRAFT 349
           S +  G K+ RLW  ++I +     VLK+   +  D + GIFLDLS+++G I LD   F 
Sbjct: 481 STQIGGSKQRRLWLHQDIIKEGTINVLKNKLVRPKD-VRGIFLDLSEVEGEICLDCDHFE 539

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
           +M NLR  KFY           S   +E  + +K+  P G+    KK+R LHW  +PL  
Sbjct: 540 DMCNLRYLKFY----------NSHCPQECKTTNKINTPEGVKLPLKKVRCLHWLEFPLEE 589

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEK-------------------------------- 437
            P++F P NLV+L L  SK++Q WEG+K                                
Sbjct: 590 FPNDFDPINLVDLKLPRSKIKQLWEGDKDTPFLKWVDLQHSSKLCSLSGLLKAEKLQRLN 649

Query: 438 -------ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
                    +P  +   K LS L+ KGC SL   P  ++ V   T+  S C +  +FP I
Sbjct: 650 LEGCTTLKTLPHDMHKMKVLSFLNLKGCTSLEFLPE-MNLVSLKTLTLSGCSSFKDFPLI 708

Query: 491 SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
           S  +  LYL  + I ++P+++E L  L VL+++ CK L+ I     +L++L  LIL  C 
Sbjct: 709 SDNIETLYLDGTEISQLPTNMEKLQSLVVLNMKDCKMLEEIPGRVNELKALQELILSDCF 768

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
           NL++FPEI   M  L  +  D T +  +P     LP ++ L +   +K+  LP  I  L 
Sbjct: 769 NLKNFPEI--NMSSLNILLLDGTAVEVMP----QLPSVQYLSLSRNTKISCLPIGISHLS 822

Query: 611 YLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
            L ++ L   + ++ +P        L+ LD+  C  L++  +
Sbjct: 823 QLKWLNLKYCTKLTSVPE---FPPNLQCLDAHGCSLLKTVSK 861



 Score =  120 bits (302), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 226/507 (44%), Gaps = 46/507 (9%)

Query: 552  LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
            LE FP   + + +L  +   R+ I +L    ++ P L+ + ++  SKL +L   + + + 
Sbjct: 587  LEEFPNDFDPI-NLVDLKLPRSKIKQLWEGDKDTPFLKWVDLQHSSKLCSLSGLLKAEKL 645

Query: 612  LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR 671
                L   + +  LP  +    +L  L+   C  LE  P   L+ L  + L   S +  +
Sbjct: 646  QRLNLEGCTTLKTLPHDMHKMKVLSFLNLKGCTSLEFLPEMNLVSLKTLTLSGCSSF--K 703

Query: 672  EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
            + P       ++E LYL G     LP  ++++  L  ++++D  ML+ +P     LK L 
Sbjct: 704  DFP---LISDNIETLYLDGTEISQLPTNMEKLQSLVVLNMKDCKMLEEIPGRVNELKALQ 760

Query: 732  ---LIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLP---E 785
               L DC  L++ P +     ++ L     +  +P+LP  +QYL+L     +  LP    
Sbjct: 761  ELILSDCFNLKNFPEINMSSLNILLLDGTAVEVMPQLP-SVQYLSLSRNTKISCLPIGIS 819

Query: 786  LPLCLQLLTVRNCNRLQSLPEILLCLQELDA---SVLEKLSKHSPDLQWAPESLKSAAIC 842
                L+ L ++ C +L S+PE    LQ LDA   S+L+ +SK  P  +  P     +   
Sbjct: 820  HLSQLKWLNLKYCTKLTSVPEFPPNLQCLDAHGCSLLKTVSK--PLARIMPTEQNHST-- 875

Query: 843  FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEI 902
            F FTNC  L   A  +I + +  + + ++ A  R    +      S         PG E+
Sbjct: 876  FIFTNCQNLEQAAKEEITSYAQRKCQLLSYARKRYNGGLVSESLFS------TCFPGCEV 929

Query: 903  PDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKT 962
            P WF +++ GS + ++L PH   + L G A CAV+   +   D    F V+  F +E K+
Sbjct: 930  PSWFCHETVGSELKVKLLPHWHDKKLAGIALCAVVSCFE-HQDQISRFSVTCTFKVEDKS 988

Query: 963  L--------SETKHVDLGYNSRYIE--DLIDSDRVILGFKP------CLNVGFPDGYHHT 1006
                     S T+H D G  +R+ +  D I+SD V +G+        C   G  D  + T
Sbjct: 989  WIPFTFPVGSWTRHED-GKVTRHEDEKDKIESDHVFIGYTSYPHTIKCPEDGNSDKCNST 1047

Query: 1007 IATFKFFAERKFYKIK--RCGLCPVYA 1031
             A+  F       K+K  +CG   VYA
Sbjct: 1048 QASLNFTITGANEKLKVLQCGFSLVYA 1074


>gi|359493289|ref|XP_003634561.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Vitis vinifera]
          Length = 944

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 211/638 (33%), Positives = 318/638 (49%), Gaps = 74/638 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V +VGI+G  GIGKTT+A+A++D+ S +F+G+ F++++R  S+   GL  LQ+++  
Sbjct: 220 SRDVLMVGIFGSAGIGKTTIARALYDEISCQFDGASFLANIREVSKK-DGLCCLQERLFC 278

Query: 64  TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
             L    +V      +  + +    K+LIVLDDVN+  QL+ L G  D FG+GSRI++T 
Sbjct: 279 DILLGGRKVMLLRRDNLMESKFCTKKVLIVLDDVNDKKQLELLAGRHDWFGKGSRIIITC 338

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           R++ +L + + +E   Y    L+  EA    C+ A  E   P        ++ +  + NP
Sbjct: 339 RNEHLLLRHKVDES--YEFKKLDGLEALALLCHHALTEEQSPFKRFLFLDNIRARCENNP 396

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L L+V GS L  K  ++W             EI+     LK+S+  L    K IFLD+AC
Sbjct: 397 LKLKVAGSYLRGKEDANW-------------EIYVNSKFLKVSYEDLLEEEKDIFLDVAC 443

Query: 244 FFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
           FF+GE +DFV  IL   D S    + +L ++ L++IS   L M + +QEM  +I  ++++
Sbjct: 444 FFQGECEDFVTKILEKPDFSAKQGVQVLSNRCLLTISEGKLWMDNSIQEMAWKIANKQAQ 503

Query: 301 KEPGKRSRLWDPKEISRVLKHNKGTDA-IEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
             PGK  RLWD  +I  VLK N+G  A IEGI L+LSK K       AF+ M  LRL K 
Sbjct: 504 I-PGKPCRLWDHNKILHVLKRNEGIHALIEGISLELSKSKDKKFSGEAFSEMDALRLLKV 562

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLP-KKLRYLHWDTYPLRTLPSNFKPKN 418
           +         L S    ++ +Y KV       +    KLRYLH   Y L + PSNF+ + 
Sbjct: 563 F---------LGSGCVNDKETY-KVHFSTDFTFPSYDKLRYLHGHGYQLDSFPSNFEAEE 612

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
           L+ELN+ CS ++Q        +     +F  L AL     Q L +             NF
Sbjct: 613 LLELNMPCSSLKQ--------IKGDEIHFPNLIALDLSHSQQLETIS-----------NF 653

Query: 479 SYCVNLIEFPQISGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
           S   NL           RL L G  ++ +V  SI  L  L +++L+GCKRLK +    CK
Sbjct: 654 SRMPNL----------ERLVLEGCRSLVKVDPSIVNLKKLSLMNLKGCKRLKSLPKRICK 703

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT--PITELPSSFENLPGLEVLFVED 595
            + L TLIL GC  LE      E+ ++   + + RT   +  LP      P L +L +  
Sbjct: 704 FKFLETLILTGCSRLEKLLGDREERQNSVNLKASRTYRRVIILP------PALRILHLGH 757

Query: 596 CSKLD---NLPDNIGSLEYLYYI-LAAASAISQLPSSV 629
           C +      LP +I  ++    I +   S  ++L +S+
Sbjct: 758 CKRFQEILKLPSSIQEVDAYNCISMGTLSWNTRLEASI 795



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 173/413 (41%), Gaps = 88/413 (21%)

Query: 641  SHCKGLESFPRTFLLGLSAMGLLHISD--YAVREIPQEIAYLSSLEILYLSGNNFESLPA 698
             H   L+SFP  F     A  LL ++    ++++I  +  +  +L  L LS +      +
Sbjct: 596  GHGYQLDSFPSNF----EAEELLELNMPCSSLKQIKGDEIHFPNLIALDLSHSQQLETIS 651

Query: 699  IIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLID---CKMLQSLP--VLPF-CLESLD 752
               +M  L  + LE    L  +    + LK L L++   CK L+SLP  +  F  LE+L 
Sbjct: 652  NFSRMPNLERLVLEGCRSLVKVDPSIVNLKKLSLMNLKGCKRLKSLPKRICKFKFLETLI 711

Query: 753  LTGCNMLRSL-PELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCL 811
            LTGC+ L  L  +       +NL+     R +  LP  L++L + +C R Q + ++   +
Sbjct: 712  LTGCSRLEKLLGDREERQNSVNLKASRTYRRVIILPPALRILHLGHCKRFQEILKLPSSI 771

Query: 812  QELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMA 871
            QE+DA                              NC+ +   + N  L  S+L+     
Sbjct: 772  QEVDA-----------------------------YNCISMGTLSWNTRLEASILQ----- 797

Query: 872  IASLRLGYEMAINEKLSELRGSLIVLPGSEIPD-WFSNQSSGSSICIQLP-PHSSCRNLI 929
               +++  E A +          IVLPG+ IPD W +++ +GSS+ ++L  P     +L+
Sbjct: 798  --RIKINPESAFS----------IVLPGNTIPDCWVTHKVTGSSVTMKLKNPDRYNDDLL 845

Query: 930  GFAFCAVLDSKK----------VDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIE 979
            GFA C V   +            +   F +FY   +  ++    S+    + G NS    
Sbjct: 846  GFAVCLVFAPQAERPQLNPEILCELKNFTFFYSCGEDSVDEFPESDQ---EWGNNS---- 898

Query: 980  DLIDSDRVILGFKPCLNVG--FPDGYHHTIATFKFFAERKFYKIKRCGLCPVY 1030
                ++ V L ++P        P  ++H  A+F+ F       +K+C +  +Y
Sbjct: 899  ----TEHVWLAYRPHARADRCHPKEWNHIKASFEVFD----CVVKKCAIRLIY 943


>gi|357513231|ref|XP_003626904.1| TMV resistance protein N [Medicago truncatula]
 gi|355520926|gb|AET01380.1| TMV resistance protein N [Medicago truncatula]
          Length = 1179

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 192/590 (32%), Positives = 294/590 (49%), Gaps = 68/590 (11%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNS-ETAGGLEHLQKQ 60
           + S  V + GIWGMGG GKTT AKAIF+Q + +F  + F+ ++R    +   G+ HLQ+Q
Sbjct: 231 NQSSKVCLTGIWGMGGSGKTTTAKAIFNQINLKFMHASFIENIREVCIKNDRGIIHLQQQ 290

Query: 61  MLSTTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +LS  +    +V   NI        ER R   + +VLDDV    QLK L    + FG GS
Sbjct: 291 LLSDVMKTNEKVY--NIAEGQMMINERFRGKNVFVVLDDVTTFEQLKALCANPEFFGPGS 348

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            +++TTRD  +L+ F+ +   + ++  ++  E+ E F    F++ +  ED +  S+ VVS
Sbjct: 349 VLIITTRDVHLLDLFKVD--YVCKMKEMDENESLELFSWHVFRQPNPREDFSEFSKRVVS 406

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KS 236
           Y  G PL LEV+GS         W  V  +   I     H I + L+IS++ L   + K 
Sbjct: 407 YCGGLPLALEVIGSYSNQMTDEDWISVFSNPKTIPN---HQIQEKLRISYDGLNQDMEKD 463

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGR 292
           IFLDI CFF G+D+ +V  IL+    D    + +L+++SL+ +   N L MHD++++MGR
Sbjct: 464 IFLDICCFFIGKDRTYVTEILNGCGLDADTGITVLVERSLLKVDNYNKLEMHDLIRDMGR 523

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           +IVR+ S KEPGKRSRLW  +++  +L  N GT+ +EG+ L   +   +     +F  M+
Sbjct: 524 EIVRESSAKEPGKRSRLWFHEDVHDILTTNSGTETVEGLVLKSQRTGRVCFSTNSFKKMN 583

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            LRL                      L    V L      L K+LR++HW  +    +P 
Sbjct: 584 QLRL----------------------LQLDCVDLTGDYGNLSKELRWVHWQGFTFNCIPD 621

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           +F   NLV   L+ S ++Q W   K  V   I N  +         + L S P       
Sbjct: 622 DFHQGNLVVFELKHSNIKQVWNKTKLLVNLKILNLSH--------SRYLTSSP------- 666

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
               +FS   NL           +L +    ++ EV  SI  L  L +L+L+ C  L  +
Sbjct: 667 ----DFSKLPNL----------EKLIMKDCPSLSEVHPSIGDLNKLLMLNLKDCIGLSNL 712

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
             S  +L+SL TLIL GC  ++   E + +ME L  + ++ T + E+P S
Sbjct: 713 PKSIYQLKSLNTLILSGCSKIDKLEEDIVQMESLTTLIANNTAVKEVPFS 762



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 2/156 (1%)

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
           G +    L  S I++V +  + L +L++L+L   + L   S  F KL +L  LI+  C +
Sbjct: 626 GNLVVFELKHSNIKQVWNKTKLLVNLKILNLSHSRYLTS-SPDFSKLPNLEKLIMKDCPS 684

Query: 552 L-EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
           L E  P I +  + L     D   ++ LP S   L  L  L +  CSK+D L ++I  +E
Sbjct: 685 LSEVHPSIGDLNKLLMLNLKDCIGLSNLPKSIYQLKSLNTLILSGCSKIDKLEEDIVQME 744

Query: 611 YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
            L  ++A  +A+ ++P S+  S  +R +     +GL
Sbjct: 745 SLTTLIANNTAVKEVPFSIVRSKSIRYISLCGYEGL 780


>gi|357500587|ref|XP_003620582.1| Elongation factor Ts [Medicago truncatula]
 gi|355495597|gb|AES76800.1| Elongation factor Ts [Medicago truncatula]
          Length = 1245

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 233/737 (31%), Positives = 359/737 (48%), Gaps = 138/737 (18%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS D+V+ +GI GMGGIGKTTLA A++DQ SH F  SCF+ DV    +   G    QKQ
Sbjct: 211 LDSVDSVRAIGICGMGGIGKTTLAMALYDQISHRFSASCFIDDVSKIYKLHDGPLDAQKQ 270

Query: 61  MLSTTLS-EKLEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +L  TL  E  ++    ++ +  + R+ R ++L++LD+V++V QL+++    +  G GSR
Sbjct: 271 ILLQTLGIEHHQICNHYSVTNLIRSRLCRERVLLILDNVDQVAQLEKIGVHREWLGAGSR 330

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFK-ENHCPEDLNWHSRSVVS 177
           I++ +RD+ +L K+ G +  +Y+V  L + ++ + FC  AFK E     +    +  ++ 
Sbjct: 331 IIIISRDEHIL-KYYGVD-AVYKVPLLNWTDSHKLFCQKAFKFEKVIMSNYENLAYEILD 388

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y  G PL + VLGS L  +  + W   L    R+ ES  +DI D+L++SF+ L    K I
Sbjct: 389 YANGLPLAIIVLGSFLFGRNVTEWKSALA---RLRESPNNDIMDVLQLSFDGLEHTEKEI 445

Query: 238 FLDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FL IACFF    K++V +IL+     +D+ L +L DKSL+S+  + + MH +L+E+GR+I
Sbjct: 446 FLHIACFFSYSSKEYVKNILNCCGFHADIGLSVLNDKSLISLGESTIIMHSLLEELGRKI 505

Query: 295 VRQESEKEPGKRSRLWDPKEISRVL--KHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           V++ S KE  K SR+W  K+++ V   K  K  +AIE     L   + + ++  A   MS
Sbjct: 506 VQENSSKERRKWSRVWSEKQLNNVTMEKMEKHVEAIE-----LWSYEEVVVEHLA--KMS 558

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NLRL      +                      +P  L  L   LRY+ WD YP + LP+
Sbjct: 559 NLRLLIIKCGR---------------------NIPGSLSSLSNALRYVEWDGYPFKCLPT 597

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           +F P +L+EL L  S ++Q W           +N KYL  L   G    R          
Sbjct: 598 SFHPNDLIELILMNSDIKQLW-----------KNKKYLPNLRRLGLSYSRKLLK------ 640

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
                    V+  EFP                           +LE L+L GCK L  + 
Sbjct: 641 --------IVDFGEFP---------------------------NLEWLNLEGCKNLVELD 665

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
            S   LR LV L L  C NL                         +P++  +L  LE L 
Sbjct: 666 PSIGLLRKLVYLNLKNCKNL-----------------------VSIPNNIFDLCSLEDLN 702

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP-- 650
           +  CSK+ N P ++                S L S+   +   +  D+   +   SFP  
Sbjct: 703 MRGCSKVFNNPMHLKK--------------SGLSSTKKKNK--KQHDTRESESHSSFPTP 746

Query: 651 --RTFLLGLS-AMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
              T+LL  S ++  + IS   +R++P  I  L  LE L L GNNF +LP+ ++++S+L 
Sbjct: 747 TTNTYLLPFSHSLRSIDISFCHLRQVPDAIECLHWLERLDLGGNNFVTLPS-LRKLSKLV 805

Query: 708 FIHLEDFNMLQSLPELP 724
           +++LE   +L+SLP LP
Sbjct: 806 YLNLEHCKLLESLPRLP 822



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 186/464 (40%), Gaps = 95/464 (20%)

Query: 559 LEKME-HLKRI--YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL-EYLYY 614
           +EKME H++ I  +S    + E  +   NL     L +  C +  N+P ++ SL   L Y
Sbjct: 531 MEKMEKHVEAIELWSYEEVVVEHLAKMSNLR----LLIIKCGR--NIPGSLSSLSNALRY 584

Query: 615 ILAAASAISQLPSSVALSNMLR-SLDSSHCKGL----ESFPRTFLLGLS-AMGLLHISDY 668
           +         LP+S   ++++   L +S  K L    +  P    LGLS +  LL I D+
Sbjct: 585 VEWDGYPFKCLPTSFHPNDLIELILMNSDIKQLWKNKKYLPNLRRLGLSYSRKLLKIVDF 644

Query: 669 AVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE--LPL 725
              E P       +LE L L G  N   L   I  + +L +++L++   L S+P     L
Sbjct: 645 G--EFP-------NLEWLNLEGCKNLVELDPSIGLLRKLVYLNLKNCKNLVSIPNNIFDL 695

Query: 726 C-LKYLHLIDCKMLQSLPV--------------------------------------LPF 746
           C L+ L++  C  + + P+                                      LPF
Sbjct: 696 CSLEDLNMRGCSKVFNNPMHLKKSGLSSTKKKNKKQHDTRESESHSSFPTPTTNTYLLPF 755

Query: 747 C--LESLDLTGCNMLRSLPELPLCLQYLNLEDC--NMLRSLPELPLCLQL--LTVRNCNR 800
              L S+D++ C+ LR +P+   CL +L   D   N   +LP L    +L  L + +C  
Sbjct: 756 SHSLRSIDISFCH-LRQVPDAIECLHWLERLDLGGNNFVTLPSLRKLSKLVYLNLEHCKL 814

Query: 801 LQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKA--NNK 858
           L+SLP             L        D Q   E+  +    ++F    K+ G    N  
Sbjct: 815 LESLPR------------LPSPPTSGRDQQ---ENNNTFIGLYDFGIVRKITGLVIFNCP 859

Query: 859 ILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQ 918
            LAD           S  + + MA     S L    I+ PGSEIP W +NQS G SI I+
Sbjct: 860 KLADCERERCSSLTFSWMIQFIMA--NPQSYLNEFHIITPGSEIPSWINNQSMGDSIPIE 917

Query: 919 LPPHSSCRNLIGFAFCAVLD-SKKVDSDCFRYFYVSFQFDLEIK 961
               +   N IGF  C V   + +V +  FR   +     + IK
Sbjct: 918 FSS-AMHDNTIGFVCCVVFSVAPQVSTVWFRIMCIDLDIPVTIK 960


>gi|15235928|ref|NP_193425.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5302805|emb|CAB46046.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268443|emb|CAB80963.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|332658423|gb|AEE83823.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1304

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 249/913 (27%), Positives = 415/913 (45%), Gaps = 159/913 (17%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQK 59
            ++S +   +VGIWG  GIGK+T+ +A+F Q S +F    FV+      S+ +G     QK
Sbjct: 197  LESKEAKIMVGIWGQSGIGKSTIGRALFSQLSSQFPLRAFVTYKSTSGSDVSGMKLSWQK 256

Query: 60   QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            ++LS  L +K       I HF   ++R++  K+LI+LDDV+ +  LK L+G+ + FG GS
Sbjct: 257  ELLSEILGQK----DIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGS 312

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI+V T+D+++L+    E   +Y V       A +    +AF ++  P+D    +  V  
Sbjct: 313  RIIVITQDRQLLKAH--EIDLVYEVKLPSQGLALQMISQYAFGKDSPPDDFKALAFEVAE 370

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                 PL L VLGSSL  + K  W K++  L    + +I +    L++ +++L  + + +
Sbjct: 371  LAGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEET---LRVCYDRLNKKNREL 427

Query: 238  FLDIACFFEGEDKDFVASILDDSESDV-LDILIDKSLVSISGNF-LNMHDILQEMGRQIV 295
            F  IACFF G     V  +L+D   DV L +L++KSL+ I+ +  + MH++L+++GR+I 
Sbjct: 428  FKCIACFFNGFKVSNVKELLED---DVGLTMLVEKSLIRITPDGDIEMHNLLEKLGREID 484

Query: 296  RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFL---DLSKIKGINLDPRAFTNMS 352
            R +S+  PGKR  L + ++I  VL    GT+ + GI L        +   +D + F  M 
Sbjct: 485  RAKSKGNPGKRQFLTNFEDIQEVLAEKTGTEILLGIRLPHPGYLTTRSFLIDEKLFKGMR 544

Query: 353  NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            NL+    Y+   Y               +S   LP  L YLP KLR L W   PL++LPS
Sbjct: 545  NLQ----YLEIGY---------------WSDGDLPQSLVYLPLKLRLLEWVYCPLKSLPS 585

Query: 413  NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY---------------LSALSFKG 457
             F+ + LV+L ++ SK+E+ WEG          N  Y               L  L+   
Sbjct: 586  TFRAEYLVKLIMKNSKLEKLWEGTLPLGSLKKMNLWYSKYFKEIPDLSLAINLEELNLSE 645

Query: 458  CQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ--SAIEEVPSSIECLT 515
            C+SL + PS++     +   +   V LI+   + G     YL    S +E     +   +
Sbjct: 646  CESLVTLPSSIQNAIKLRTLYCSGVLLIDLKSLEGMCNLEYLSVDCSRMEGTQGIVYFPS 705

Query: 516  DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
             L +L    C  LKR+ ++F                         K+E+L ++  + + +
Sbjct: 706  KLRLLLWNNCP-LKRLHSNF-------------------------KVEYLVKLRMENSDL 739

Query: 576  TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNML 635
             +L    + L  L+ +F+     L  +PD   ++      +    ++   PSS+  +  L
Sbjct: 740  EKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKL 799

Query: 636  RSLDSSHCKGLESFPRTFLLGLSAMGLLHISD---------------------------- 667
              LD S CK LESFP    L L ++  L+++                             
Sbjct: 800  IYLDISDCKKLESFPTD--LNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVV 857

Query: 668  ---YAVREIPQEIAYLSSL-----------EILYLSGNNF--ESLPAIIKQMSQLRFIHL 711
               +  + +P  + YL  L            +++L+   +  E L   I+ +  L  + L
Sbjct: 858  EDCFWNKNLPAGLDYLDCLMRCMPCEFRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMDL 917

Query: 712  EDFNMLQSLPELPLC--LKYLHLIDCKMLQSLP---------------------VLPF-- 746
             +   L  +P+L     LK+L+L +CK L +LP                     VLP   
Sbjct: 918  SESENLTEIPDLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDV 977

Query: 747  ---CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQL--LTVRNCNRL 801
                LE+LDL+GC+ LR+ P +   +++L LE+   +  + +L    +L  L + NC  L
Sbjct: 978  NLSSLETLDLSGCSSLRTFPLISKSIKWLYLEN-TAIEEILDLSKATKLESLILNNCKSL 1036

Query: 802  QSLPEILLCLQEL 814
             +LP  +  LQ L
Sbjct: 1037 VTLPSTIGNLQNL 1049



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 136/526 (25%), Positives = 233/526 (44%), Gaps = 90/526 (17%)

Query: 333  LDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSY--SKVQLPNGL 390
            L+LS+ + +   P +  N   LR          +++ L  M   E LS   S+++   G+
Sbjct: 641  LNLSECESLVTLPSSIQNAIKLRTLYCSGVLLIDLKSLEGMCNLEYLSVDCSRMEGTQGI 700

Query: 391  DYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK------------- 437
             Y P KLR L W+  PL+ L SNFK + LV+L +  S +E+ W+G +             
Sbjct: 701  VYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGS 760

Query: 438  --------------------------ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
                                         PSS+QN   L  L    C+ L SFP++L+  
Sbjct: 761  KYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLDISDCKKLESFPTDLNLE 820

Query: 472  CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEV---LDLRGCKRL 528
                +N + C NL  FP I    + +   +   E V    +C  +  +   LD   C  L
Sbjct: 821  SLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVE--DCFWNKNLPAGLDYLDC--L 876

Query: 529  KRISTSFCKLR-SLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLP 586
             R     C+ R   +  + + C   E   E ++ +  L+ +  S+   +TE+P       
Sbjct: 877  MRCMP--CEFRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMDLSESENLTEIP-DLSKAT 933

Query: 587  GLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKG 645
             L+ L++ +C  L  LP  IG+L+ L  + +   + +  LP+ V LS+ L +LD S C  
Sbjct: 934  NLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDVNLSS-LETLDLSGCSS 992

Query: 646  LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMS 704
            L +FP    L   ++  L++ + A+ EI  +++  + LE L L+   +  +LP+ I  + 
Sbjct: 993  LRTFP----LISKSIKWLYLENTAIEEI-LDLSKATKLESLILNNCKSLVTLPSTIGNLQ 1047

Query: 705  QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE 764
             LR ++++    L+ LP            D   L SL +       LDL+GC+ LR+ P 
Sbjct: 1048 NLRRLYMKRCTGLEVLP-----------TDVN-LSSLGI-------LDLSGCSSLRTFPL 1088

Query: 765  LPLCLQYLNLEDCNMLRSLPELPLC------LQLLTVRNCNRLQSL 804
            +   + +L LE+     ++ E+P C      L++L +  C RL+++
Sbjct: 1089 ISTNIVWLYLENT----AIGEVPCCIEDFTRLRVLLMYCCQRLKNI 1130



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 153/364 (42%), Gaps = 91/364 (25%)

Query: 326  DAIEGIFLDLSKIK-------GINLDPRAFTNMS---NLRLFKFYVPKFYEIEKLPSMST 375
            +AI+ I+LD+S  K        +NL+   + N++   NLR F        +++  P    
Sbjct: 795  NAIKLIYLDISDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVD-FPEGRN 853

Query: 376  E---EQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
            E   E   ++K  LP GLDYL             +R +P  F+P+ LV LN+RC K E+ 
Sbjct: 854  EIVVEDCFWNK-NLPAGLDYL----------DCLMRCMPCEFRPEYLVFLNVRCYKHEKL 902

Query: 433  WEGEKA---------------------------------------CVPSSIQNFKYLSAL 453
            WEG ++                                        +PS+I N + L  L
Sbjct: 903  WEGIQSLGSLEEMDLSESENLTEIPDLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRL 962

Query: 454  SFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEV------ 507
              K C  L   P++++     T++ S C +L  FP IS  +  LYL  +AIEE+      
Sbjct: 963  EMKECTGLEVLPTDVNLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEILDLSKA 1022

Query: 508  -----------------PSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
                             PS+I  L +L  L ++ C  L+ + T    L SL  L L GC 
Sbjct: 1023 TKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV-NLSSLGILDLSGCS 1081

Query: 551  NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
            +L  FP I     ++  +Y + T I E+P   E+   L VL +  C +L N+  NI  L 
Sbjct: 1082 SLRTFPLI---STNIVWLYLENTAIGEVPCCIEDFTRLRVLLMYCCQRLKNISPNIFRLR 1138

Query: 611  YLYY 614
             L +
Sbjct: 1139 SLMF 1142



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 31/252 (12%)

Query: 317  RVLKHNKGTDAIEGIF----LDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
            R  KH K  + I+ +     +DLS+ + +   P   +  +NL+    Y+     +  LPS
Sbjct: 895  RCYKHEKLWEGIQSLGSLEEMDLSESENLTEIP-DLSKATNLK--HLYLNNCKSLVTLPS 951

Query: 373  -MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY------PLRTLPSNFKPKNLVELNLR 425
             +   ++L   +++   GL+ LP  +     +T        LRT P     K++  L L 
Sbjct: 952  TIGNLQKLVRLEMKECTGLEVLPTDVNLSSLETLDLSGCSSLRTFP--LISKSIKWLYLE 1009

Query: 426  CSKVEQPWEGEKAC---------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
             + +E+  +  KA                +PS+I N + L  L  K C  L   P++++ 
Sbjct: 1010 NTAIEEILDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDVNL 1069

Query: 471  VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                 ++ S C +L  FP IS  +  LYL  +AI EVP  IE  T L VL +  C+RLK 
Sbjct: 1070 SSLGILDLSGCSSLRTFPLISTNIVWLYLENTAIGEVPCCIEDFTRLRVLLMYCCQRLKN 1129

Query: 531  ISTSFCKLRSLV 542
            IS +  +LRSL+
Sbjct: 1130 ISPNIFRLRSLM 1141


>gi|238908352|emb|CAZ40338.1| putative disease resistance protein [Raphanus sativus]
          Length = 2100

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 199/641 (31%), Positives = 310/641 (48%), Gaps = 64/641 (9%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +D  D    VGI G  GIGKTT+A+A+  + S  F+ +CF+ ++RG+  +      L+ +
Sbjct: 1265 LDDEDGAMFVGICGPAGIGKTTIARALHSRLSSTFQHTCFMENLRGSCNSGTDEYGLKLR 1324

Query: 61   MLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            +    LS+     G  + H    KER+  +K+LIVLDDV+++ QL+ L  + + FG GSR
Sbjct: 1325 LQELLLSKIFNQNGVKLFHLGAIKERLCDLKVLIVLDDVDDLQQLEALADDTNWFGDGSR 1384

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            I+VTT D+ +LE+        YRV+     +A + FC FAF++   P         V+  
Sbjct: 1385 IIVTTEDQEILEQHGI--SNTYRVDFPTQVDARQIFCRFAFRQLSAPHGFEKLVDRVIKL 1442

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
                PL L V+GSSL  K+   W  +L  L    + +I     +L++ +N L    + +F
Sbjct: 1443 CSNLPLGLRVMGSSLRRKKVDDWEGILQRLENSFDQKID---AVLRVGYNSLHKDDQFLF 1499

Query: 239  LDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGRQI 294
            L IACFF  +D D V ++L DS  DV   L  L+ KSL+ IS    + MH +LQ++GR+ 
Sbjct: 1500 LLIACFFNYKDDDHVKAMLVDSNLDVRLGLKNLVYKSLIQISAEGTIVMHKLLQQVGREA 1559

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSN 353
            V  +   +P KR  L D  +I  VL+++    ++ GI  D S I  G+ +  + F  M +
Sbjct: 1560 VHLQ---DPRKRQILIDSHQICDVLENDSDGTSVMGISFDTSTIPNGVYISAQGFRRMRD 1616

Query: 354  LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
            LR         YE  + P++         +V LP  + + P  LR LHW+ YP + LP  
Sbjct: 1617 LRFL-----SIYETRRDPNV---------RVHLPEDMSF-PPLLRLLHWEVYPGKCLPHT 1661

Query: 414  FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
             +P++LVEL    S +EQ W+G        +Q    L  +   G  SL+  P   +    
Sbjct: 1662 LRPEHLVELCFVNSMLEQLWQG--------VQPLTNLKKMDLSGSLSLKEVPDLSNATSL 1713

Query: 474  VTINFSYCVNLIEFPQISG---KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
              +N + C +L+E P   G   K+  L +      +V  ++  L  LE L + GC +L +
Sbjct: 1714 KRLNLTGCWSLVEIPSSIGDLHKLEELEMNLCVSVQVFPTLLNLASLESLRMVGCWQLSK 1773

Query: 531  ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLK--RIYSD----------------- 571
            I      ++SLV    +G   L+ FPE +    HL    IY                   
Sbjct: 1774 IPDLPTNIKSLV----VGETMLQEFPESVRLWSHLHSLNIYGSVLTVPLLETTSQEFSLA 1829

Query: 572  RTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
               I  +P   ++  GL  L++  C+KL +LP+   SL  L
Sbjct: 1830 AATIERIPDWIKDFNGLRFLYIAGCTKLGSLPELPPSLRKL 1870



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 203/690 (29%), Positives = 303/690 (43%), Gaps = 135/690 (19%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +D  D     GI G  GIGKTT+A+A+  + S  F  +CF+ ++RG+  +      L+ +
Sbjct: 325 LDDEDGAMFAGICGPAGIGKTTIARALHSRLSSSFHLTCFMENLRGSCNSGLDEYGLKLR 384

Query: 61  MLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +    LS+        I H     +R+   K+LI+LDDV+++ QL+ L  E + FG GSR
Sbjct: 385 LQELLLSKIFNQNDMRIYHLGAIPQRMCDQKVLIILDDVDDLQQLEALADETNWFGDGSR 444

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           IVVTT D+ +LE+        Y V+    +EA + FC +AF+ +  P             
Sbjct: 445 IVVTTEDQELLEQHGI--NNTYYVDLPTDDEARKIFCRYAFRRSLTPYGFETLVERTTEL 502

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
               P  L V       +RK   GK               I  +L++ ++ L    +++F
Sbjct: 503 CGKLPFGLRV---QFYAERKKTTGK---------------IDAVLRVGYDSLHENEQTLF 544

Query: 239 LDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF-LNMHDILQEMGRQI 294
           L IA FF  +D   V ++L D+  DV   L  L  KSL  IS    + MH +LQ++GRQ 
Sbjct: 545 LLIAIFFNYQDDGHVKTMLADTNLDVRLGLKTLAYKSLTKISSQGKIVMHKLLQQVGRQA 604

Query: 295 V-RQESEK--------------EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI- 338
           V RQE  K              EP KR  L D  EI  VL+++ G+  + G+  D+S I 
Sbjct: 605 VQRQEPWKRRILIDPQEICDVLEPWKRQVLTDTDEIRDVLENDSGSRNLMGVSFDMSTIL 664

Query: 339 KGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLR 398
             +++  RAFT+M NLR  K Y  +                +  +V LP  +++ P +LR
Sbjct: 665 HDMDISARAFTSMRNLRFLKVYKTRCD--------------TNVRVHLPEDMEF-PPRLR 709

Query: 399 YLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK-----------AC-------- 439
            LHW+ YP + LP  F  ++LVEL LR +++EQ WEG +           +C        
Sbjct: 710 LLHWEVYPRKFLPRTFCTEHLVELYLRDTELEQLWEGTQPLTNLKKMFLGSCLYLKELPD 769

Query: 440 --------------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
                               + SS+ N   L +L    C +L+  P+  +     +    
Sbjct: 770 LAKATNLEKLRLDRCRSLVEIHSSVGNLHKLESLEVAFCYNLQVVPNLFNLASLESFMMV 829

Query: 480 YCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC-------------- 525
            C  L   P IS  +T L +  + +EE    I   + L+ LD+ GC              
Sbjct: 830 GCYQLRSLPDISTTITELSIPDTLLEEFTEPIRLWSHLQRLDIYGCGENLEQVRSDIAVE 889

Query: 526 ------KRLKRIS--TSFC--KL-------RSLVTLILLGCLNLEH---FP-----EILE 560
                 K L+R+   T FC  KL       RSL  LI+  C +LE    FP     E L 
Sbjct: 890 RIPDCIKDLQRLEELTIFCCPKLVSLPELPRSLTLLIVYECDSLETLAPFPLGSEIEALS 949

Query: 561 KMEHLKRIYSDRTPITELPSSFENLPGLEV 590
             E  +     R  IT+L SS+  LPG  +
Sbjct: 950 FPECFRLDREARRVITQLQSSWVCLPGRNI 979



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 136/320 (42%), Gaps = 56/320 (17%)

Query: 442  SSIQNFKYLSALSFKGCQSLRSFP-------SNLHFVCPVTINFSYCVNLIEFPQISGK- 493
            S+I N  Y+SA  F+  + LR           N+    P  ++F   + L+ +    GK 
Sbjct: 1598 STIPNGVYISAQGFRRMRDLRFLSIYETRRDPNVRVHLPEDMSFPPLLRLLHWEVYPGKC 1657

Query: 494  ---------VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
                     +  L    S +E++   ++ LT+L+ +DL G   LK +        SL  L
Sbjct: 1658 LPHTLRPEHLVELCFVNSMLEQLWQGVQPLTNLKKMDLSGSLSLKEVP-DLSNATSLKRL 1716

Query: 545  ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC---SKLDN 601
             L GC +L   P  +  +  L+ +  +     ++  +  NL  LE L +  C   SK+ +
Sbjct: 1717 NLTGCWSLVEIPSSIGDLHKLEELEMNLCVSVQVFPTLLNLASLESLRMVGCWQLSKIPD 1776

Query: 602  LPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMG 661
            LP NI SL      +   + + + P SV L + L SL+              + G     
Sbjct: 1777 LPTNIKSL------VVGETMLQEFPESVRLWSHLHSLN--------------IYG----- 1811

Query: 662  LLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP 721
                   +V  +P  +   +S E   L+    E +P  IK  + LRF+++     L SLP
Sbjct: 1812 -------SVLTVP--LLETTSQE-FSLAAATIERIPDWIKDFNGLRFLYIAGCTKLGSLP 1861

Query: 722  ELPLCLKYLHLIDCKMLQSL 741
            ELP  L+ L + +C+ L+++
Sbjct: 1862 ELPPSLRKLIVDNCESLETV 1881



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 139/387 (35%), Gaps = 109/387 (28%)

Query: 563  EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAI 622
            EHL  +Y   T + +L    + L  L+ +F+  C  L  LPD   +       L    ++
Sbjct: 728  EHLVELYLRDTELEQLWEGTQPLTNLKKMFLGSCLYLKELPDLAKATNLEKLRLDRCRSL 787

Query: 623  SQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSS 682
             ++ SSV   + L SL+ + C  L+  P  F L  S    + +  Y +R +P     ++ 
Sbjct: 788  VEIHSSVGNLHKLESLEVAFCYNLQVVPNLFNLA-SLESFMMVGCYQLRSLPDISTTITE 846

Query: 683  LEILYLSGNNFESLPAIIKQMSQLRFIHL----EDFNMLQS---LPELPLCLKYLHLIDC 735
            L I        E     I+  S L+ + +    E+   ++S   +  +P C+K     D 
Sbjct: 847  LSI---PDTLLEEFTEPIRLWSHLQRLDIYGCGENLEQVRSDIAVERIPDCIK-----DL 898

Query: 736  KMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTV 795
            + L+ L +  FC                             C  L SLPELP  L LL V
Sbjct: 899  QRLEELTI--FC-----------------------------CPKLVSLPELPRSLTLLIV 927

Query: 796  RNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKA 855
              C+ L++L                           AP  L S      F  C +L+ +A
Sbjct: 928  YECDSLETL---------------------------APFPLGSEIEALSFPECFRLDREA 960

Query: 856  NNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSI 915
               I                            ++L+ S + LPG  IP  F ++  G+ +
Sbjct: 961  RRVI----------------------------TQLQSSWVCLPGRNIPAEFHHRVIGNFL 992

Query: 916  CIQLPPHSSCRNLIGFAFCAVLDSKKV 942
             I       C N   F  CAV+  K+V
Sbjct: 993  AI-------CSNAYRFKLCAVVSPKQV 1012


>gi|145326644|ref|NP_001077769.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12324936|gb|AAG52415.1|AC011622_3 putative disease resistance protein; 17840-13447 [Arabidopsis
           thaliana]
 gi|332196021|gb|AEE34142.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1131

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 215/663 (32%), Positives = 324/663 (48%), Gaps = 76/663 (11%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +D  D   I+GI G  GIGK+T+A+A+  + S  F+ +CF+ D+RG SE  G  ++ Q+ 
Sbjct: 207 LDYKDEALIIGISGPAGIGKSTIARALESRLSDRFQLTCFM-DLRG-SENNGLHDYGQQL 264

Query: 61  MLSTTLSEK-LEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            L   L  K L   G  I H    ++R+  +++LI+LDDV+++ QLK L  E   FG GS
Sbjct: 265 RLQEQLLAKVLNQDGTRICHLGVLQQRLSDLRVLIILDDVSDIKQLKALAKETTWFGPGS 324

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+VTT +K +L++ RG +   Y V     EEA E FC FAF+++  P      +  +  
Sbjct: 325 RIIVTTENKDLLQQ-RGID-STYHVGFPSREEALEIFCKFAFEQSSPPHAFEKLAARITH 382

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                PL L V+GSSL  K++  W  V+H   R+  +   +I D+L++ + +L    + +
Sbjct: 383 LCGNLPLGLCVMGSSLFGKKQDEWEFVVH---RLETNPGQEIDDVLRVGYERLHENDQML 439

Query: 238 FLDIACFFEGEDKDFVASIL-DDSESDV---LDILIDKSLVSI--SGNFLNMHDILQEMG 291
           FL IA FF   D+D V ++L DD   DV   L  LI+KSL+ I  +G  + MH +LQ++G
Sbjct: 440 FLHIAIFFNYRDRDLVEAMLADDGNLDVGNWLKFLINKSLIEIYRTGQIV-MHKLLQQVG 498

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDA-IEGIFLDLSKIKGINLDPRAFTN 350
           RQ +R++   EP KR  L +  EI  +L++ KGT   + GI  D S I  + +   AF  
Sbjct: 499 RQAIRRQ---EPWKRQILINANEICDLLRYEKGTSCNVSGISFDTSGISEVTICDGAFKR 555

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           + +LR    Y  +                  ++V +P  +++ P +LR LHW  YP ++L
Sbjct: 556 LHDLRFLHVYKSR--------------DDGNNRVHIPEKVEF-PPRLRLLHWAAYPSKSL 600

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
           P  F  + LVELN+R S VE+ WEG +      ++N KY+     K              
Sbjct: 601 PPTFNLECLVELNMRESLVEKLWEGTQ-----HLKNLKYMDLTESK-------------- 641

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIE---EVPSSIECLTDLEVLDLRGCKR 527
                       NL E P +S      Y      E   E+PSS   L  LE L++  C  
Sbjct: 642 ------------NLKELPDLSNATNLEYFYLDNCESLVEIPSSFAHLHKLEWLEMNNCIN 689

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
           L+ I      L S+  + + GC  L  FP I   +E L    SD T + ++P+S  +   
Sbjct: 690 LQVIPAHM-NLTSVKQVNMKGCSRLRKFPVISRHIEALD--ISDNTELEDMPASIASWCH 746

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
           L  L +    KL  L     SL +L     + + I  +P  +   + L  L  S C  L 
Sbjct: 747 LVYLDMSHNEKLQGLTQLPTSLRHLNL---SYTDIESIPDCIKALHQLEELCLSGCTRLA 803

Query: 648 SFP 650
           S P
Sbjct: 804 SLP 806



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 99/418 (23%), Positives = 165/418 (39%), Gaps = 119/418 (28%)

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSF----------------------ENLPGL 588
           N  H PE +E    L+ ++    P   LP +F                      ++L  L
Sbjct: 573 NRVHIPEKVEFPPRLRLLHWAAYPSKSLPPTFNLECLVELNMRESLVEKLWEGTQHLKNL 632

Query: 589 EVLFVEDCSKLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
           + + + +   L  LPD  N  +LEY Y  L    ++ ++PSS A  + L  L+ ++C  L
Sbjct: 633 KYMDLTESKNLKELPDLSNATNLEYFY--LDNCESLVEIPSSFAHLHKLEWLEMNNCINL 690

Query: 647 ESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQ 705
           +  P    + L+++  +++   + +R+ P    ++ +L+I        E +PA I     
Sbjct: 691 QVIPAH--MNLTSVKQVNMKGCSRLRKFPVISRHIEALDIS--DNTELEDMPASIASWCH 746

Query: 706 LRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC------LESLDLTGCNML 759
           L ++ +     LQ L +LP  L++L+L        +  +P C      LE L L+GC  L
Sbjct: 747 LVYLDMSHNEKLQGLTQLPTSLRHLNL----SYTDIESIPDCIKALHQLEELCLSGCTRL 802

Query: 760 RSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVL 819
            SLP+LP  ++ L  EDC  L S+                                    
Sbjct: 803 ASLPDLPCSIKALEAEDCESLESVS----------------------------------- 827

Query: 820 EKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGY 879
                 SP        L + +    FTNC KL G+A   I+  S                
Sbjct: 828 ------SP--------LYTPSARLSFTNCFKLGGEAREAIIRRS---------------- 857

Query: 880 EMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
                   S+  GS ++LPG E+P  F +++ G+S+ I LP   + +    F  C V+
Sbjct: 858 --------SDSTGS-VLLPGREVPAEFDHRAQGNSLSILLPLGGNSQ----FMVCVVI 902



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 14/234 (5%)

Query: 510 SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY 569
           ++ECL +L + +      ++++      L++L  + L    NL+  P+ L    +L+  Y
Sbjct: 605 NLECLVELNMRE----SLVEKLWEGTQHLKNLKYMDLTESKNLKELPD-LSNATNLEYFY 659

Query: 570 SDR-TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSS 628
            D    + E+PSSF +L  LE L + +C  L  +P ++         +   S + + P  
Sbjct: 660 LDNCESLVEIPSSFAHLHKLEWLEMNNCINLQVIPAHMNLTSVKQVNMKGCSRLRKFP-- 717

Query: 629 VALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL-SSLEILY 687
             +S  + +LD S    LE  P +     S   L+++ D +  E  Q +  L +SL  L 
Sbjct: 718 -VISRHIEALDISDNTELEDMPASIA---SWCHLVYL-DMSHNEKLQGLTQLPTSLRHLN 772

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           LS  + ES+P  IK + QL  + L     L SLP+LP  +K L   DC+ L+S+
Sbjct: 773 LSYTDIESIPDCIKALHQLEELCLSGCTRLASLPDLPCSIKALEAEDCESLESV 826


>gi|357500293|ref|XP_003620435.1| Resistance protein [Medicago truncatula]
 gi|355495450|gb|AES76653.1| Resistance protein [Medicago truncatula]
          Length = 1062

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 183/566 (32%), Positives = 286/566 (50%), Gaps = 75/566 (13%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           +++  V +VG++G+GG+GK+TLA+AI++    +F+G CF+ DVR NS     L+HLQ+++
Sbjct: 237 ETNKGVHMVGLYGIGGLGKSTLARAIYNFIGDQFDGLCFLHDVRENS-AKNNLKHLQEKL 295

Query: 62  LSTT--LSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           L  T  L  KL+     IP   KER+ R K+L++LDDV+ + QL  L G LD FG+GSR+
Sbjct: 296 LLKTIGLEIKLDHVSEGIP-IIKERLCRKKILLILDDVDNMNQLHALAGGLDWFGRGSRV 354

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TTRDK +L       K  + V GL   EA E     AFK +  P          V+Y+
Sbjct: 355 IITTRDKHLLSSHG--IKSTHAVEGLNGTEALELLRWMAFKSDKVPSGYEDILNRAVAYS 412

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            G PLV+EV+GS+L  K    W   L   ++I   EI  I   LK+S++ L    +S+FL
Sbjct: 413 SGLPLVIEVVGSNLFGKSIEKWKSTLDGYDKIPNKEIQKI---LKVSYDALEEEEQSVFL 469

Query: 240 DIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSI--SGNFLNMHDILQEMGRQ 293
           DIAC F+G    + KD + +      +  L++L +KSL+        + +HD++++MG++
Sbjct: 470 DIACCFKGCGWADVKDILHAHYGHCITHHLEVLAEKSLIDRWEYDGCVGLHDLIEDMGKE 529

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           +VRQES KEPG+RSRLW   +I   L  N GT  IE I+++   ++ + +D +       
Sbjct: 530 VVRQESPKEPGERSRLWCQDDIVHALNENTGTSKIEMIYMNFHSMESV-IDQKGMA---- 584

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHW----------- 402
                     F ++ KL ++  E           NGL YLP  LR L W           
Sbjct: 585 ----------FKKMTKLKTLIIENG------HFSNGLKYLPNSLRVLKWKGCLLESLSSS 628

Query: 403 ---------------DTYPLRTLPSNFKPKNLVELNLR-CSKVEQPWEGEKACVPSSIQN 446
                          D   L  +P      N+ + + + C  +          +  SI +
Sbjct: 629 ILSKKFQNMKVLTLDDCEYLTHIPDVSGLSNIEKFSFKFCRNL--------ITIDDSIGH 680

Query: 447 FKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT---RLYLGQSA 503
              L  +S  GC  L+ FP  L       +  S+CV+L  FP++  K+T   R+    ++
Sbjct: 681 QNKLEFISAIGCSKLKRFPP-LGLASLKELELSFCVSLNSFPELLCKMTNIKRILFVNTS 739

Query: 504 IEEVPSSIECLTDLEVLDLRGCKRLK 529
           I E+PSS + L++L  + +  C  L+
Sbjct: 740 IGELPSSFQNLSELNDISIERCGMLR 765


>gi|357474671|ref|XP_003607620.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508675|gb|AES89817.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1381

 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 207/678 (30%), Positives = 329/678 (48%), Gaps = 85/678 (12%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +DS D V++VGI GMGGIGKTTL  A+  + SH F+  CF+ D+       G +   QKQ
Sbjct: 522  LDSVDDVRVVGICGMGGIGKTTLTTALCGRISHRFDVRCFIDDLSRIYRHDGPIG-AQKQ 580

Query: 61   MLSTTL-SEKLEVAG-PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            +L  TL  E  ++    +  +  + R+RR++ LI++D+V++V QL +L    +  G GSR
Sbjct: 581  ILHQTLGGEHFQIYNLYDTTNLIQSRLRRLRALIIVDNVDKVEQLDKLAVNRECLGAGSR 640

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            IV+ +RD+ +L+++  +   +Y+V  L    + + FC  AFK +H     +  +  ++SY
Sbjct: 641  IVIISRDEHILKEYGVD--VVYKVPLLNGTNSLQLFCQKAFKLDHIMSSFDKLTFDILSY 698

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL ++VLGS L  +    W      L R+ +S   DI D++++SF  L    K IF
Sbjct: 699  ANGLPLAIKVLGSFLFGRDIYEWKSA---LARLSKSPNKDIMDVMRLSFEGLEKLEKEIF 755

Query: 239  LDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQI 294
            LDIACFF    K +V  +L+     +D+ L +LIDKSL+SIS  N + MH +L+E+GR+I
Sbjct: 756  LDIACFFIQSKKIYVQKVLNCCGFHADIGLRVLIDKSLLSISEENNIEMHSLLKELGREI 815

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFL--DLSKIKG-INLDPRAFTNM 351
            V+++S K+  + SR+W  +++  ++  N     +E I+   D+ + +  I +   A + M
Sbjct: 816  VQEKSIKDSRRWSRVWLHEQLHNIMLENVEM-KVEAIYFPCDIDENETEILIMGEALSKM 874

Query: 352  SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            S+LRL                      L   +V+    L  L  +LRY+ W  YP + LP
Sbjct: 875  SHLRL----------------------LILKEVKFAGNLGCLSNELRYVEWGRYPFKYLP 912

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
            + F+P  LVEL +R S V+Q W+ +K  +P+       L  L     ++LR  P      
Sbjct: 913  ACFQPNQLVELIMRHSSVKQLWK-DKKYLPN-------LKILDLSHSKNLRKVPDFGEMP 964

Query: 472  CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
                +N   C+ L+                    ++  SI  L  L  + L+ CK L  I
Sbjct: 965  NLEELNLKGCIKLV--------------------QIDPSIGVLRKLVFMKLKDCKNLVSI 1004

Query: 532  STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
              +   L SL  L L GC  + + P  L+K +    ++  ++  + L  +   L  L   
Sbjct: 1005 PNNILGLSSLKYLNLSGCSKVFNNPRHLKKFDSSDILFHSQSTTSSLKWTTIGLHSLYHE 1064

Query: 592  FVEDC------------------SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSN 633
             +  C                    L  LPD IG L  L  +    +    LPS   LS 
Sbjct: 1065 VLTSCLLPSFLSIYCLSEVDISFCGLSYLPDAIGCLLRLERLNIGGNNFVTLPSLRELSK 1124

Query: 634  MLRSLDSSHCKGLESFPR 651
            ++  L+  HCK LES P+
Sbjct: 1125 LVY-LNLEHCKLLESLPQ 1141



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 103/425 (24%), Positives = 170/425 (40%), Gaps = 84/425 (19%)

Query: 548  GCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--N 605
             C       E++ +   +K+++ D+          + LP L++L +     L  +PD   
Sbjct: 913  ACFQPNQLVELIMRHSSVKQLWKDK----------KYLPNLKILDLSHSKNLRKVPDFGE 962

Query: 606  IGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHI 665
            + +LE L   L     + Q+  S+ +   L  +    CK L S P   +LGLS++  L++
Sbjct: 963  MPNLEELN--LKGCIKLVQIDPSIGVLRKLVFMKLKDCKNLVSIPNN-ILGLSSLKYLNL 1019

Query: 666  SDYA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
            S  + V   P+ +    S +IL+ S +   SL      +  L                  
Sbjct: 1020 SGCSKVFNNPRHLKKFDSSDILFHSQSTTSSLKWTTIGLHSL------------------ 1061

Query: 725  LCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM----- 779
                Y  ++   +L S   + +CL  +D++ C  L  LP+   CL  L LE  N+     
Sbjct: 1062 ----YHEVLTSCLLPSFLSI-YCLSEVDISFCG-LSYLPDAIGCL--LRLERLNIGGNNF 1113

Query: 780  --LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLK 837
              L SL EL   L  L + +C  L+SLP++         +  E ++ +            
Sbjct: 1114 VTLPSLRELSK-LVYLNLEHCKLLESLPQLPF------PTAFEHMTTYK----------- 1155

Query: 838  SAAICFEFTNCLKLNGKAN-NKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIV 896
               +     NC KL    + N +    ++++           YE  I           IV
Sbjct: 1156 -RTVGLVIFNCPKLGESEDCNSMAFSWMIQLIQARQQPSTFSYEDIIK----------IV 1204

Query: 897  LPGSEIPDWFSNQSSGSSICIQLPP--HSSCRNLIGFAFCAVLDSKKVD---SDCFRYFY 951
            +PGSEIP WF+NQS G SI + L     ++  + IG A CAV     VD   + C R   
Sbjct: 1205 IPGSEIPIWFNNQSEGDSIRMDLSQIMDNNDNDFIGIACCAVFSVAPVDPTTTTCARRPK 1264

Query: 952  VSFQF 956
            +  +F
Sbjct: 1265 IELRF 1269



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 54/193 (27%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS D V++VG+ GMGGIGK  +A A++++  H+F     + D+R      G +      
Sbjct: 137 LDSVDDVRVVGVCGMGGIGKKAIATALYNKIFHQFPVLFLIDDLRKIYRHDGPI------ 190

Query: 61  MLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
               +LS +   AG                                          SRI+
Sbjct: 191 ----SLSHEWLCAG------------------------------------------SRII 204

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +T RD+ +L+ F  +      +  L   ++ +     AFK +H     +  +  ++ Y  
Sbjct: 205 ITFRDEHILKVFVVDVVYKVPL--LNGTDSLQLLSRKAFKIDHLMSSYDKLASDILWYAN 262

Query: 181 GNPLVLEVLGSSL 193
           G PL ++VLGS L
Sbjct: 263 GLPLAIKVLGSFL 275


>gi|297740985|emb|CBI31297.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 169/450 (37%), Positives = 255/450 (56%), Gaps = 31/450 (6%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V +VGI+G+GGIGKTT+A A ++  S  F+GS F+  V    ++ GGL  LQK++   
Sbjct: 207 DDVHMVGIYGIGGIGKTTIAMAFYNDISSRFDGSSFLRGV--GEKSKGGLLELQKKLFKD 264

Query: 65  TL---SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
            L   S   +     I +  K+R+   ++LIVLDDV E+ QL+ L G+   +G  S I++
Sbjct: 265 ILKCESTDFDDTSEGI-NGIKKRLCSKRVLIVLDDVEELEQLENLAGKNGWYGAKSTIII 323

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKEN--HCPEDLNWHSRSVVSYT 179
           TT+D  +L +       +Y V  L  +EA + F  +AFK+N     ED    S  VV Y 
Sbjct: 324 TTKDTSLLSQHG--VNILYEVKELNHKEAIDLFNWWAFKQNIPKPKEDFESLSHCVVGYA 381

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           KG P+ L+VLG  L  K+   W   LH L +I   ++  +   LK+S+ +L    K IFL
Sbjct: 382 KGLPIALKVLGGFLFGKKIDEWKSALHKLEKIPHMKVQSV---LKVSYERLDDTEKEIFL 438

Query: 240 DIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
           DIACFF+G+DKD V+ IL       + +L ++ L++IS N L+MHD+LQ+MG++IVRQE 
Sbjct: 439 DIACFFKGKDKDLVSRILGRYADIGIKVLHERCLITISQNKLDMHDLLQQMGQEIVRQEC 498

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
            KEPGKRSRLWD  ++  +L  N GT+AIEG+F+++     +     +FT M+ LRLF  
Sbjct: 499 LKEPGKRSRLWDSNDVDSMLTRNTGTEAIEGLFVEIPTSNKMQFSTNSFTKMNRLRLFIV 558

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
           Y  +++   K                     ++   +LRYL++    L +LP+NF  +NL
Sbjct: 559 YNKRYWNCFK------------------GDFEFPSSQLRYLNFYGCSLESLPTNFNGRNL 600

Query: 420 VELNLRCSKVEQPWEGEKACVPSSIQNFKY 449
           VEL+L  S +++ W+G++      + N  Y
Sbjct: 601 VELDLVRSGIKKLWKGDEIFNSLKVINLGY 630


>gi|297840111|ref|XP_002887937.1| hypothetical protein ARALYDRAFT_474976 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333778|gb|EFH64196.1| hypothetical protein ARALYDRAFT_474976 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 991

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 220/731 (30%), Positives = 350/731 (47%), Gaps = 116/731 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +D+ D V IVGI G  GIGKTT+A+A+  + +  F  +CF+ ++RG+  ++     L+ Q
Sbjct: 160 LDNEDEVIIVGICGPAGIGKTTIARALHSRLTCSFRRTCFMENLRGSYNSSLDEHGLKLQ 219

Query: 61  MLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +    LS+ L   G  I H     ER+   K+LI+LD+V+++ QL+ L  +   FG GSR
Sbjct: 220 LQEQLLSKILNQNGMRIYHLGAIHERLCDQKVLIILDEVDDLKQLEALANDTKWFGPGSR 279

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           IVVTT ++ +L++     K  Y V+    +EA E FC +AFK++   +     S  V   
Sbjct: 280 IVVTTENQELLKQH--GIKNTYHVDFPTQKEAREIFCRYAFKQSTPQDGFENLSERVTKL 337

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
               PL L V+GS L  K +  W  +L+ L    +     I  +L++ ++ L  + + +F
Sbjct: 338 CSRLPLGLRVMGSYLLRKTEDDWEDILYRLESSFDPVDRGIERVLRVGYDGLHEKNQLLF 397

Query: 239 LDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVS-ISGNFLNMHDILQEMGRQI 294
           L IA FF  +D+D V ++L D+  +V   L  L  KSL+   SG  + MH +LQ++GR+ 
Sbjct: 398 LLIAFFFNYKDEDHVKAMLADNNLNVRLGLKTLEYKSLIQKSSGGNIVMHKLLQQVGREA 457

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSN 353
           V+++   EP KR  L D  EI  VL+ + G   + GI  ++S I  G+++  +AF NM N
Sbjct: 458 VQRQ---EPWKRQILIDAHEICDVLETDSGCANVMGISFNVSTIPNGVHISAKAFQNMRN 514

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LR    Y              T   ++  +V +P  +++ P +LR+LHW+ YP + LPS 
Sbjct: 515 LRFLSIY-------------ETRRDINL-RVNVPENMNF-PHRLRFLHWEVYPGKCLPST 559

Query: 414 FKPKNLVELNLRCSKVEQPWEGEK----------------------------------AC 439
           F+P+ LVELNL+ +K+E+ WEG +                                   C
Sbjct: 560 FRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELPDLSNATNLKRLDLTGC 619

Query: 440 -----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
                +PSS++N   L  L    C  L+  P++ +    +++    C  L +FP IS  +
Sbjct: 620 WSLVEIPSSVENLHKLEELEMNLCLQLQVVPTHFNLASLISLRMLGCWQLRKFPGISTNI 679

Query: 495 TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
           T L +G + +EE+  SI   + LE L + G      I+ +F      VTLI         
Sbjct: 680 TSLVIGDAMLEEMLESITLWSCLETLSIYG----SVITHNFWA----VTLI--------- 722

Query: 555 FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
                EKM          T I  +P   ++LP L+ L++  C KL +LP+  GSL  L  
Sbjct: 723 -----EKMG---------TDIERIPYCIKDLPALKSLYIGGCPKLVSLPELPGSLRRLTV 768

Query: 615 ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP 674
               +      P    + +              SFP  F LG+ A  ++       ++  
Sbjct: 769 ETCESLETVSFPIDSPIVSF-------------SFPNCFELGVEARRVI------TQKAG 809

Query: 675 QEIAYLSSLEI 685
           Q +AYL   E+
Sbjct: 810 QMLAYLPGREV 820



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 142/364 (39%), Gaps = 104/364 (28%)

Query: 442 SSIQNFKYLSALSFKGCQSLRSFPS-------NLHFVCPVTINFSYCVNLIEFPQISGK- 493
           S+I N  ++SA +F+  ++LR           NL    P  +NF + +  + +    GK 
Sbjct: 496 STIPNGVHISAKAFQNMRNLRFLSIYETRRDINLRVNVPENMNFPHRLRFLHWEVYPGKC 555

Query: 494 ---------VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
                    +  L L  + +E++    + LT+L  L+L G  RLK +        +L  L
Sbjct: 556 LPSTFRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELP-DLSNATNLKRL 614

Query: 545 ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
            L GC +L                        E+PSS ENL  LE L +  C +L  +P 
Sbjct: 615 DLTGCWSL-----------------------VEIPSSVENLHKLEELEMNLCLQLQVVPT 651

Query: 605 NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSA-MGLL 663
           +             AS IS           LR L    C  L  FP     G+S  +  L
Sbjct: 652 HFN----------LASLIS-----------LRMLG---CWQLRKFP-----GISTNITSL 682

Query: 664 HISDYAVREIPQEIAYLSSLEILYLSG----NNFESLPAIIKQMSQLRFIHLEDFNMLQS 719
            I D  + E+ + I   S LE L + G    +NF ++  I K              M   
Sbjct: 683 VIGDAMLEEMLESITLWSCLETLSIYGSVITHNFWAVTLIEK--------------MGTD 728

Query: 720 LPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM 779
           +  +P C+K            LP L    +SL + GC  L SLPELP  L+ L +E C  
Sbjct: 729 IERIPYCIK-----------DLPAL----KSLYIGGCPKLVSLPELPGSLRRLTVETCES 773

Query: 780 LRSL 783
           L ++
Sbjct: 774 LETV 777


>gi|351727669|ref|NP_001235633.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
 gi|223452586|gb|ACM89620.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
          Length = 711

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 155/379 (40%), Positives = 225/379 (59%), Gaps = 14/379 (3%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +  S+ V  VGIWGMGGIGKTT+A A++D++S ++EG CF+ +VR   E  G L HLQ++
Sbjct: 115 LKESNEVIFVGIWGMGGIGKTTIAHAMYDKYSPQYEGCCFL-NVREEVEQRG-LSHLQEK 172

Query: 61  MLSTTL-SEKLEVAGPNIPHFTKERVRRM---KLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           ++S  L  E L  +G +   F     R+M   K+L+VLDDVN   QLK L+G+   FG G
Sbjct: 173 LISELLEGEGLHTSGTSKARFFDSAGRKMGRKKVLVVLDDVNTSEQLKYLVGKPICFGPG 232

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SR+++T+RDKRVL    G   +I++V  ++  ++ + FC  AF E+H        S  VV
Sbjct: 233 SRVLITSRDKRVLTS--GGVYQIHKVKEMDPRDSLKLFCLNAFNESHPKMGYEKLSEEVV 290

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
              +GNPL L+VLG+    +    W   L  + +    EI  +   L+ S++ L    K 
Sbjct: 291 KIAQGNPLALKVLGADFHSRSMDTWECALSKIKKYPNEEIQSV---LRFSYDGLHEVEKK 347

Query: 237 IFLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQ 293
            FLDIA FFE +DKD+V   LD      +  +++L  K+L++IS N + MHD+++EMG +
Sbjct: 348 AFLDIAFFFEEDDKDYVTRKLDAWGFHGASGVEVLQQKALITISDNRIQMHDLIREMGCE 407

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IVRQES   P +RSRL D +E+S VL+ N GTD +E + +D+S IK + L    F  M  
Sbjct: 408 IVRQESIICPRRRSRLRDNEEVSNVLRQNLGTDEVEAMQIDVSGIKNLPLKLGTFKKMPR 467

Query: 354 LRLFKFYVPKFYEIEKLPS 372
           LR  KFY+P   E+  L S
Sbjct: 468 LRFLKFYLPLHAELSLLQS 486


>gi|227438267|gb|ACP30623.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1262

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 235/801 (29%), Positives = 374/801 (46%), Gaps = 116/801 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-----LQ 58
           S+ V+++ + G  GIGKTT A  +++Q S  F  S F+ ++RG+ E   G ++     LQ
Sbjct: 204 SEQVKMIVLVGPAGIGKTTTATVLYNQLSPGFPFSTFLENIRGSYEKPCGNDYQLKLRLQ 263

Query: 59  KQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           K+MLS   ++  +EV    +    +E++   ++L+VLD+V+   QL+    +   FG GS
Sbjct: 264 KKMLSQIFNQSDIEVGHLRV---AQEKLSDKQVLVVLDEVDSWWQLEATAYQRGWFGPGS 320

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            I++TT D+++L+  R     IY +     +E+ + FC +AF ++   +     +R V  
Sbjct: 321 IIIITTEDRKLLKTLRLGIDHIYEMKFPTSDESLQIFCQYAFGQDSPYDGFEELAREVTW 380

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                PL L V+GS L    +  W   +  L R+  S   +I   L+ S++ L+ + K++
Sbjct: 381 LAGNLPLGLRVMGSYLRGMSREQW---IDALPRLRSSLDREIESTLRFSYDGLSDKDKAL 437

Query: 238 FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FL IACFF+    + V S L  S+ DV   + +L D+SL+SI G ++ MH +LQ+MGR I
Sbjct: 438 FLHIACFFQYFKVESVKSCLKKSKLDVNHGIQVLADRSLISIEGGYVKMHSLLQKMGRGI 497

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V++ES KEPGKR  LW   EI  +L  N GT  +            I L  R + N  N 
Sbjct: 498 VKKESLKEPGKREFLWSTSEIIELLDKNTGTGNV------------IALSLRTYENSENS 545

Query: 355 RLFKFYVPK--FYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           +  K  + K  F E+  L  +    ++    V++P GL+ LP+KLR +HWD  PLR  PS
Sbjct: 546 KRGKIQISKSAFDEMNNLQFL----KVKSDNVRIPEGLNCLPEKLRLIHWDNCPLRFWPS 601

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
            F  K LVEL +  SK E+ WEG        I+    L  +  +    L+  P       
Sbjct: 602 KFSAKFLVELIMPISKFEKLWEG--------IKPLYCLKLMDLRNSLYLKEIPDLSKATS 653

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
              ++ + C +L+E                    + SSI   + L V +L  C+ LK + 
Sbjct: 654 LEKLDLTDCESLLE--------------------LTSSIGNASKLRVCNLSYCRLLKELP 693

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFE--------N 584
           +S  +L +L  L L  C+ L+ F      ++ L   YS    +  LPSS          +
Sbjct: 694 SSMGRLINLEELNLSHCVGLKEFSG-YSTLKKLDLGYS----MVALPSSISTWSCLYKLD 748

Query: 585 LPGLEVLFVEDCSKLD--NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSH 642
           + GL + F E  S  D  N+PD+I  L      + + + I ++P  +     LR L  + 
Sbjct: 749 MSGLGLKFFEPPSIRDFPNVPDSIVEL------VLSRTGIEEVPPWIEKLFRLRKLIMNG 802

Query: 643 CKGLESF-PRTF------LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFES 695
           C+ L+   P+        LL LS   +L   DY   + P    Y    E         E 
Sbjct: 803 CEKLKKISPKVSKLENLELLFLSFCDILLDGDY---DSPLSYCYDDVFEA------KIEW 853

Query: 696 LPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL---IDCKMLQS-LPVLPFCLESL 751
            P + + +  +   +++D         LP+CL    L   I   +  +    +P+C+ SL
Sbjct: 854 GPDLKRSLKLISDFNIDDI--------LPICLPEKALKSSISVSLCGACFKTIPYCIRSL 905

Query: 752 ------DLTGCNMLRSLPELP 766
                 D+T C  L +LP LP
Sbjct: 906 RGLSKLDITQCRNLVALPPLP 926


>gi|110741602|dbj|BAE98749.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 964

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 214/663 (32%), Positives = 324/663 (48%), Gaps = 76/663 (11%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +D  D   I+GI G  GIGK+T+A+A+  + S  F+ +CF+ D+RG SE  G  ++ Q+ 
Sbjct: 40  LDYKDEALIIGISGPAGIGKSTIARALESRLSDRFQLTCFM-DLRG-SENNGLHDYGQQL 97

Query: 61  MLSTTLSEK-LEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            L   L  K L   G  I H    ++R+  +++LI+LDDV+++ QLK L  E   FG GS
Sbjct: 98  RLQEQLLAKVLNQDGTRICHLGVLQQRLSDLRVLIILDDVSDIKQLKALAKETTWFGPGS 157

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+VTT +K +L++ RG +   Y V     EEA E FC FAF+++  P      +  +  
Sbjct: 158 RIIVTTENKDLLQQ-RGID-STYHVGFPSREEALEIFCKFAFEQSSPPHAFEKLAARITH 215

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                PL L V+GSSL  K++  W  V+H   R+  +   +I D+L++ + +L    + +
Sbjct: 216 LCGNLPLGLCVMGSSLFGKKQDEWEFVVH---RLETNPGQEIDDVLRVGYERLHENDQML 272

Query: 238 FLDIACFFEGEDKDFVASIL-DDSESDV---LDILIDKSLVSI--SGNFLNMHDILQEMG 291
           FL IA FF   D+D V ++L DD   DV   L  LI+KSL+ I  +G  + MH +LQ++G
Sbjct: 273 FLHIAIFFNYRDRDLVEAMLADDGNLDVGNWLKFLINKSLIEIYRTGQIV-MHKLLQQVG 331

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDA-IEGIFLDLSKIKGINLDPRAFTN 350
           RQ +R++   +P KR  L +  EI  +L++ KGT   + GI  D S I  + +   AF  
Sbjct: 332 RQAIRRQ---KPWKRQILINANEICDLLRYEKGTSCNVSGISFDTSGISEVTICDGAFKR 388

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           + +LR    Y  +                  ++V +P  +++ P +LR LHW  YP ++L
Sbjct: 389 LHDLRFLHVYKSR--------------DDGNNRVHIPEKVEF-PPRLRLLHWAAYPSKSL 433

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
           P  F  + LVELN+R S VE+ WEG +      ++N KY+     K              
Sbjct: 434 PPTFNLECLVELNMRESLVEKLWEGTQ-----HLKNLKYMDLTESK-------------- 474

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIE---EVPSSIECLTDLEVLDLRGCKR 527
                       NL E P +S      Y      E   E+PSS   L  LE L++  C  
Sbjct: 475 ------------NLKELPDLSNATNLEYFYLDNCESLVEIPSSFAHLHKLEWLEMNNCIN 522

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
           L+ I      L S+  + + GC  L  FP I   +E L    SD T + ++P+S  +   
Sbjct: 523 LQVIPAHM-NLTSVKQVNMKGCSRLRKFPVISRHIEALD--ISDNTELEDMPASIASWCH 579

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
           L  L +    KL  L     SL +L     + + I  +P  +   + L  L  S C  L 
Sbjct: 580 LVYLDMSHNEKLQGLTQLPTSLRHLNL---SYTDIESIPDCIKALHQLEELCLSGCTRLA 636

Query: 648 SFP 650
           S P
Sbjct: 637 SLP 639



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 99/421 (23%), Positives = 166/421 (39%), Gaps = 119/421 (28%)

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSF----------------------ENLPGL 588
           N  H PE +E    L+ ++    P   LP +F                      ++L  L
Sbjct: 406 NRVHIPEKVEFPPRLRLLHWAAYPSKSLPPTFNLECLVELNMRESLVEKLWEGTQHLKNL 465

Query: 589 EVLFVEDCSKLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
           + + + +   L  LPD  N  +LEY Y  L    ++ ++PSS A  + L  L+ ++C  L
Sbjct: 466 KYMDLTESKNLKELPDLSNATNLEYFY--LDNCESLVEIPSSFAHLHKLEWLEMNNCINL 523

Query: 647 ESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQ 705
           +  P    + L+++  +++   + +R+ P    ++ +L+I        E +PA I     
Sbjct: 524 QVIPAH--MNLTSVKQVNMKGCSRLRKFPVISRHIEALDIS--DNTELEDMPASIASWCH 579

Query: 706 LRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC------LESLDLTGCNML 759
           L ++ +     LQ L +LP  L++L+L        +  +P C      LE L L+GC  L
Sbjct: 580 LVYLDMSHNEKLQGLTQLPTSLRHLNL----SYTDIESIPDCIKALHQLEELCLSGCTRL 635

Query: 760 RSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVL 819
            SLP+LP  ++ L  EDC  L S+                                    
Sbjct: 636 ASLPDLPCSIKALEAEDCESLESVS----------------------------------- 660

Query: 820 EKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGY 879
                 SP        L + +    FTNC KL G+A   I+  S                
Sbjct: 661 ------SP--------LYTPSARLSFTNCFKLGGEAREAIIRRS---------------- 690

Query: 880 EMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDS 939
                   S+  GS ++LPG E+P  F +++ G+S+ I LP   + +    F  C V+  
Sbjct: 691 --------SDSTGS-VLLPGREVPAEFDHRAQGNSLSILLPLGGNSQ----FMVCVVISP 737

Query: 940 K 940
           +
Sbjct: 738 R 738



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 14/234 (5%)

Query: 510 SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY 569
           ++ECL +L + +      ++++      L++L  + L    NL+  P+ L    +L+  Y
Sbjct: 438 NLECLVELNMRE----SLVEKLWEGTQHLKNLKYMDLTESKNLKELPD-LSNATNLEYFY 492

Query: 570 SDR-TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSS 628
            D    + E+PSSF +L  LE L + +C  L  +P ++         +   S + + P  
Sbjct: 493 LDNCESLVEIPSSFAHLHKLEWLEMNNCINLQVIPAHMNLTSVKQVNMKGCSRLRKFP-- 550

Query: 629 VALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL-SSLEILY 687
             +S  + +LD S    LE  P +     S   L+++ D +  E  Q +  L +SL  L 
Sbjct: 551 -VISRHIEALDISDNTELEDMPASIA---SWCHLVYL-DMSHNEKLQGLTQLPTSLRHLN 605

Query: 688 LSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           LS  + ES+P  IK + QL  + L     L SLP+LP  +K L   DC+ L+S+
Sbjct: 606 LSYTDIESIPDCIKALHQLEELCLSGCTRLASLPDLPCSIKALEAEDCESLESV 659


>gi|8778469|gb|AAF79477.1|AC022492_21 F1L3.30 [Arabidopsis thaliana]
          Length = 1075

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 255/880 (28%), Positives = 389/880 (44%), Gaps = 161/880 (18%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG-GLEHLQKQML 62
            S+ V +VGIWGMGGIGKT++ K ++DQ S +F   CF+ +++  S+  G  L+HLQK++L
Sbjct: 202  SNEVLLVGIWGMGGIGKTSIVKCLYDQLSPKFPAHCFIENIKSVSKDNGHDLKHLQKELL 261

Query: 63   STTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
            S+ L + + +          K+R+   K+ +VLD V++V Q+  L  E + FG GSRI++
Sbjct: 262  SSILCDDIRLWSVEAGCQEIKKRLGNQKVFLVLDGVDKVAQVHALAKEKNWFGPGSRIII 321

Query: 122  TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVSYTK 180
            TTRD  +L     E   +Y V  L+ ++A + F   AF+    P E  +  S        
Sbjct: 322  TTRDMGLLNTCGVE--VVYEVKCLDDKDALQMFKQIAFEGGLPPCEGFDQLSIRASKLAH 379

Query: 181  GNPLVLEVLGSSLCLKRKS--HWGKVLHDLNRICESEI-HDIYDILKISFNKLTPRVKSI 237
            G P  ++     L  +  S   W + L  L    ES +  +I +ILKIS+  L    +++
Sbjct: 380  GLPSAIQAYALFLRGRTASPEEWEEALGAL----ESSLDENIMEILKISYEGLPKPHQNV 435

Query: 238  FLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQ 293
            FL + C F G+    + S+L       S  + +L +KSL+ IS N  + MH ++++MGR+
Sbjct: 436  FLHVVCLFNGDTLQRITSLLHGPIPQSSLWIRVLAEKSLIKISTNGSVIMHKLVEQMGRE 495

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGI-NLDPRAFTNMS 352
            I+R +       R  L DP EI   L    G +  E + L    +  + +++      M 
Sbjct: 496  IIRDDMSL---ARKFLRDPMEIRVALAFRDGGEQTECMCLHTCDMTCVLSMEASVVGRMH 552

Query: 353  NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            NL+  K Y    Y                S +QL     +LP+ LR  HWD +PLR LPS
Sbjct: 553  NLKFLKVYKHVDYR--------------ESNLQLIPDQPFLPRSLRLFHWDAFPLRALPS 598

Query: 413  NFKPKNLVELNLRCSKVEQPWEGE-----KACVPSSIQNFKYLSALSFKGCQSLRSFPSN 467
               P  LVELNLR S +E  W G      K   P    N  Y   L              
Sbjct: 599  GSDPCFLVELNLRHSDLETLWSGTPSNGVKTENPCEKHNSNYFHVL-------------- 644

Query: 468  LHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKR 527
                                         LYL Q            L  L+ LD+ G K 
Sbjct: 645  -----------------------------LYLAQ-----------MLKSLKRLDVTGSKH 664

Query: 528  LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY-----SDRTPITEL--PS 580
            LK++      + SL  L+L  C  LE  PE + K   LK++        R+ +      S
Sbjct: 665  LKQLP-DLSSITSLEELLLEQCTRLEGIPECIGKRSTLKKLKLSYRGGRRSALRFFLRKS 723

Query: 581  SFENLPGLEVLFVEDCSKLDNLPD-NIG---SLEYLYYILAAASAIS-----QLPSSVAL 631
            + +   GLE  F +   K+D L + +IG   + E+       A  +S     Q+P   A+
Sbjct: 724  TRQQHIGLE--FPDAKVKMDALINISIGGDITFEFRSKFRGYAEYVSFNSEQQIPIISAM 781

Query: 632  S--------------NMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI 677
            S              N LR +  SH +  ESF          +  L + +  +R+IP  I
Sbjct: 782  SLQQAPWVISECNRFNSLRIMRFSHKENGESFSFDVFPDFPDLKELKLVNLNIRKIPSGI 841

Query: 678  AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM 737
             +L  LE L LSGN+FE+LP  +  +S+L+ + L++   LQ LP+L   ++ L L +C+ 
Sbjct: 842  CHLDLLEKLDLSGNDFENLPEAMSSLSRLKTLWLQNCFKLQELPKLTQ-VQTLTLTNCRN 900

Query: 738  LQSLPVLP--------FCLESLDLTGCNMLRSLPE--------------------LPLCL 769
            L+SL  L         +CL  L L  C  + SL +                    LP  +
Sbjct: 901  LRSLAKLSNTSQDEGRYCLLELCLENCKSVESLSDQLSHFTKLTCLDLSNHDFETLPSSI 960

Query: 770  QYLN------LEDCNMLRSLPELPLCLQLLTVRNCNRLQS 803
            + L       L +C  L+S+ +LPL LQ L    C+ L++
Sbjct: 961  RDLTSLVTLCLNNCKKLKSVEKLPLSLQFLDAHGCDSLEA 1000


>gi|357474623|ref|XP_003607596.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508651|gb|AES89793.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1039

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 218/679 (32%), Positives = 334/679 (49%), Gaps = 91/679 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS D V++VGI GMGGIGKTTLA A++ Q SH+F+  CF+ D+       G +   QKQ
Sbjct: 213 LDSVDDVRVVGICGMGGIGKTTLATALYGQISHQFDARCFIDDLSKIYRHDGQVG-AQKQ 271

Query: 61  MLSTTLS-EKLEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +L  TL  E  ++    +     + R+RR++ LI+LD+V++V QL +L    +  G GSR
Sbjct: 272 ILHQTLGKEHFQICNLFDTDDSIRRRLRRLRALIILDNVDKVEQLDKLALNRECLGVGSR 331

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I++ +RD+ +L ++  +E  +Y+V  L    + + FC  AFK +H     +  +   +SY
Sbjct: 332 IIIISRDEHILNEYGVDE--VYKVPLLNETNSLQLFCQKAFKLDHIMSGYDKLALDTLSY 389

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL ++VLGS L  +  S W      L R+ ES   DI D+L++SF+ L    K IF
Sbjct: 390 ANGLPLAIKVLGSFLFGRDISEWRSA---LARLKESPNKDIMDVLRLSFDGLENLEKEIF 446

Query: 239 LDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
           LDIACFFE  DK+ + +IL+      D+ L ILIDKSL+S       MH +L E+GR+IV
Sbjct: 447 LDIACFFERYDKECLTNILNCCGFHPDIGLRILIDKSLISFYHGGCVMHSLLVELGRKIV 506

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHN--KGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           ++ S K+  K SRLW P+    V+  N  K   AI   +    +IK         +NM++
Sbjct: 507 QENSTKDLKKWSRLWFPEHFDNVMLENMEKNVQAIVLAYHSPRQIK--KFAAETLSNMNH 564

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           +RL                      L          L+YL  +LRY+ W+ YP   LP +
Sbjct: 565 IRL----------------------LILENTYFSGSLNYLSNELRYVEWNRYPFTYLPKS 602

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS--NLHFV 471
           F+P  LVEL+L  S ++Q W+G+K      + N + +  +  +    L  F    NL   
Sbjct: 603 FQPNQLVELHLSYSSIKQLWKGKKY-----LPNLRIMDLMHSRNLIKLPDFGEVPNLEM- 656

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC------ 525
               +N + CVNLI                     +P+SI  LT L+ L+L GC      
Sbjct: 657 ----LNLAGCVNLI--------------------SIPNSIFVLTSLKYLNLSGCSKVFNY 692

Query: 526 -KRLKRISTSFCKL--RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
            K LK++ +S   L  +S  + ++L  + L    +            + +  ++ L SS 
Sbjct: 693 PKHLKKLDSSETVLHSQSKTSSLILTTIGLHSLYQ-----------NAHKGLVSRLLSSL 741

Query: 583 ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSH 642
            +   L  L +  C  L  +PD IG + +L  ++ + +    LPS   LS ++  LD  +
Sbjct: 742 PSFFFLRELDISFCG-LSQIPDAIGCIRWLGRLVLSGNNFVTLPSLRELSKLVY-LDLQY 799

Query: 643 CKGLESFPRTFLLGLSAMG 661
           CK L   P   L   S +G
Sbjct: 800 CKQLNFLPELPLPHSSTVG 818



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 157/388 (40%), Gaps = 72/388 (18%)

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQ 624
           L+ +  +R P T LP SF+                   P+ +  L   Y      S+I Q
Sbjct: 586 LRYVEWNRYPFTYLPKSFQ-------------------PNQLVELHLSY------SSIKQ 620

Query: 625 LPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD-YAVREIPQEIAYLSSL 683
           L         LR +D  H + L   P      +  + +L+++    +  IP  I  L+SL
Sbjct: 621 LWKGKKYLPNLRIMDLMHSRNLIKLPD--FGEVPNLEMLNLAGCVNLISIPNSIFVLTSL 678

Query: 684 EILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL-----IDCKM 737
           + L LSG +   + P  +K++     + L   +   SL    + L  L+      +  ++
Sbjct: 679 KYLNLSGCSKVFNYPKHLKKLDSSETV-LHSQSKTSSLILTTIGLHSLYQNAHKGLVSRL 737

Query: 738 LQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLN--LEDCNMLRSLPELPLCLQL--L 793
           L SLP   F L  LD++ C  L  +P+   C+++L   +   N   +LP L    +L  L
Sbjct: 738 LSSLPSF-FFLRELDISFCG-LSQIPDAIGCIRWLGRLVLSGNNFVTLPSLRELSKLVYL 795

Query: 794 TVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNG 853
            ++ C +L  LPE+ L               HS  +       ++  +     NC +L  
Sbjct: 796 DLQYCKQLNFLPELPL--------------PHSSTVG------QNCVVGLYIFNCPELGE 835

Query: 854 KAN-NKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSG 912
           + + +++    L++  H    S     E  I           IV+PGSEIP W +NQS G
Sbjct: 836 RGHCSRMTLSWLIQFLHANQESFACFLETDIG----------IVIPGSEIPRWLNNQSLG 885

Query: 913 SSICIQLPPHSSCRNLIGFAFCAVLDSK 940
           +S+ I L      ++ IG   C V   K
Sbjct: 886 NSMSINLSSIVHDKDFIGLVACVVFSVK 913


>gi|357457201|ref|XP_003598881.1| TMV resistance protein N [Medicago truncatula]
 gi|355487929|gb|AES69132.1| TMV resistance protein N [Medicago truncatula]
          Length = 1270

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 190/590 (32%), Positives = 289/590 (48%), Gaps = 67/590 (11%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           + S  V  VGIWGMGG+GKTT AK I+++   +F    F+ ++R   E+  G   LQ+Q+
Sbjct: 326 NQSSKVSAVGIWGMGGLGKTTTAKGIYNKIHRKFVHRSFIENIRQTCESDKGYIRLQQQL 385

Query: 62  LSTTLSEKLEVAGPNIPHFT---KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           LS     K ++   NI   T    +R+   K+LIVLDDV +V Q+K L G     G GS 
Sbjct: 386 LSDLFKTKEKIH--NIASGTITINKRLSAKKVLIVLDDVTKVQQVKALCGNYKCLGLGSV 443

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           ++VTTRD  VL     E   +     ++  E+ E F   AF+      + +  S++VV+Y
Sbjct: 444 LIVTTRDAHVLRSL--EVDCVCTAKEMDENESLELFSWHAFRNATPRANFSDLSKNVVNY 501

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK-SI 237
             G PL +EVLGS L  + K  W  VL  L +I   E+ +    LKIS++ LT   K +I
Sbjct: 502 CGGLPLAVEVLGSYLFERTKEEWKSVLSKLEKIPHEEVQEK---LKISYDGLTDDTKKAI 558

Query: 238 FLDIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSI-SGNFLNMHDILQEMGRQ 293
           FLD+ CFF G+D+D+V  IL+         + +LI++SL+ +   N L MHD++++MGR+
Sbjct: 559 FLDVCCFFIGKDRDYVTEILNGCGLFAGIGIAVLIERSLLKVEKNNKLGMHDLIRDMGRE 618

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IVR  S  +PG+RSRLW  ++   VL  N GT  +EG+ L+L      +     F  M N
Sbjct: 619 IVRGSSTNDPGERSRLWLHEDAHSVLTKNTGTQKVEGLILNLQSKGRDSFSTNVFQQMQN 678

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           +RL                      L    V L     +L K+LR+++W       +P +
Sbjct: 679 MRL----------------------LQLDCVDLTGEFAHLSKQLRWVNWQRSTFNCIPKD 716

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           F   NLV L L+ S V+Q W+  K            L  L+    + L+S P        
Sbjct: 717 FYQGNLVVLELKFSNVKQVWKETKL--------LDKLKILNLSHSKYLKSTP-------- 760

Query: 474 VTINFSYCVNLIEFPQISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
              +FS   NL           +L +    ++ E+  SI  L  L +++L+ C  L  + 
Sbjct: 761 ---DFSKLPNL----------EKLIMKDCPSLSEIHPSIGVLKKLLLINLKDCTSLGNLP 807

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
               +L S+ TLIL GC  ++   E + +M+ L  + +  T + + P S 
Sbjct: 808 REIYQLISVKTLILFGCSKIDKLEEDIVQMKSLTTLVAANTGVKQAPFSI 857



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 2/142 (1%)

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
           G +  L L  S +++V    + L  L++L+L   K LK  +  F KL +L  LI+  C +
Sbjct: 720 GNLVVLELKFSNVKQVWKETKLLDKLKILNLSHSKYLKS-TPDFSKLPNLEKLIMKDCPS 778

Query: 552 L-EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
           L E  P I    + L     D T +  LP     L  ++ L +  CSK+D L ++I  ++
Sbjct: 779 LSEIHPSIGVLKKLLLINLKDCTSLGNLPREIYQLISVKTLILFGCSKIDKLEEDIVQMK 838

Query: 611 YLYYILAAASAISQLPSSVALS 632
            L  ++AA + + Q P S+  S
Sbjct: 839 SLTTLVAANTGVKQAPFSIVRS 860


>gi|332330347|gb|AEE43933.1| TIR-NBS-LRR resistance protein muRdr1I [Rosa multiflora]
          Length = 628

 Score =  254 bits (648), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 168/441 (38%), Positives = 243/441 (55%), Gaps = 40/441 (9%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+ +GIWGMGG+GKTTLA+ ++++ SH FE   F+++VR  S T G L +LQKQ+LS   
Sbjct: 217 VRFIGIWGMGGLGKTTLARLVYEKISHLFEVCVFLANVREVSATHG-LVYLQKQILSQIW 275

Query: 67  SEK-LEV----AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
            E+ ++V    +G  +   TK       +L+VLDD ++  QL+ L+GE D FG  SRI++
Sbjct: 276 KEENIQVWDVYSGITM---TKRCFCNKAVLLVLDDADQSEQLENLVGEKDWFGLRSRIII 332

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTR++ VL    G EK  Y + GL  +EA + F   AF+     ED    S+S V Y  G
Sbjct: 333 TTRNRHVLVT-HGIEKP-YELKGLNEDEALQLFSWKAFRNYEPEEDYVEQSKSFVMYAGG 390

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            P+ L+ LGS L  +    W   L  L          ++D+LK+S+  L    K IFLDI
Sbjct: 391 LPIALKTLGSFLYRRSPDAWNFALAKLRNTPNK---TVFDLLKVSYVGLDEMEKKIFLDI 447

Query: 242 ACFFEGEDKDFVASIL---DDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQ 297
           ACF    +  F+  +L   D      +++L++KSL++IS N  + MHD+++EMG +IVRQ
Sbjct: 448 ACFSSQCEAKFIIELLYSYDVCTGIAIEVLVEKSLLTISSNNEIGMHDLIREMGCEIVRQ 507

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
           ES +EPG RSRLW   +I  V   N GT+  EGIFL L +++  + +  AF+ M NL+L 
Sbjct: 508 ESYEEPGGRSRLWFRNDIFHVFTKNTGTEVTEGIFLHLHQLEEADWNLEAFSKMCNLKL- 566

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
                                L    ++L  G  +LP  LR L W  YP ++LP  F+P 
Sbjct: 567 ---------------------LYIHNLRLSLGPKFLPDALRILKWSWYPSKSLPPCFQPD 605

Query: 418 NLVELNLRCSKVEQPWEGEKA 438
            L EL+L  S ++  W G K 
Sbjct: 606 ELTELSLVHSNIDHLWNGIKV 626


>gi|297807803|ref|XP_002871785.1| hypothetical protein ARALYDRAFT_909793 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317622|gb|EFH48044.1| hypothetical protein ARALYDRAFT_909793 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1074

 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 204/673 (30%), Positives = 322/673 (47%), Gaps = 101/673 (15%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           + S  V+ +G+WGM GIGKTTLAKA+FD  S++++ SCF+ +        G    L+++ 
Sbjct: 162 EQSWDVRRLGLWGMPGIGKTTLAKAVFDHMSNDYDASCFIENFDEQLRMVGPYRLLEEK- 220

Query: 62  LSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           +   L EK  ++   I   +  ++++   ++++VLDDV      +  +G LD FG GS I
Sbjct: 221 IGRILEEKFGISSSYITRLSLLRDKLCDTRIVVVLDDVRNPLAAESFLGRLDWFGPGSLI 280

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++T+R K+V      +  +IY V+GL   EA + F   AF+++   ++    S  V+ Y 
Sbjct: 281 IITSRYKQVFA--LCQISQIYEVHGLNKHEALKLFSQNAFEKDVPEQNDKELSMKVIDYA 338

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            GNPL L + G  L  K+       L    R+ +     I D LK  ++ L+      FL
Sbjct: 339 NGNPLALCIYGRELKGKKSEMEAAFL----RLQQCPPKKIQDRLKSVYSALSDNETYTFL 394

Query: 240 DIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
           +IACFF+GE+ D++  +L          +D+L++K LV+IS N L M+D++Q+M R I+ 
Sbjct: 395 NIACFFKGENVDYMVQLLKWCGYFPRVGIDVLVEKCLVTISENTLQMYDMIQDMIRDIIT 454

Query: 297 QESEKEPGKRSRLW------------------DPKEISRVLKHNKGTDAIEGIFLDLSKI 338
            E + +  + + LW                  DPKEI + L      + IEGI LD S +
Sbjct: 455 GE-KIQMERCTTLWHTSHIRYLLEDDELKADGDPKEIPKCLM---VAEDIEGICLDTSNL 510

Query: 339 KGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLR 398
              +++P AF  M +LR  K Y    Y  E +P ++            PNGL+YLP++LR
Sbjct: 511 I-FDVNPDAFKKMVSLRFLKIY--NSYS-ENVPGLN-----------FPNGLNYLPRELR 555

Query: 399 YLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA---------CVPSSIQNF-- 447
            LHW+ YP  +LP  F  + LVELN+  S++++ WE  K          C    +  F  
Sbjct: 556 LLHWEKYPFESLPQGFDLQELVELNMPYSELKKLWETNKNLEMLKRIKLCHSRQLVKFSI 615

Query: 448 --KYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIE 505
             + +  ++ +GC  L +F           +N S C N+  FP +   +  LYL  ++IE
Sbjct: 616 HAQNIELINLQGCTRLENFSGTTKLQHLRVLNLSGCSNITIFPGLPPNIEELYLQGTSIE 675

Query: 506 EVPSSI----------------ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
           E+P SI                +    LE +DL     L + S+    +  LV L +  C
Sbjct: 676 EIPISILARSSQPNCEELMNHMKHFPGLEHIDLESVTNLIKGSSYSQGVCKLVLLNMKDC 735

Query: 550 LNLEHFPEI--LEKMEHL------------------KRIYSDRTPITELPSSFENLPGLE 589
           L L   P++  LE ++ L                  K +Y   T I ELP   E+   LE
Sbjct: 736 LQLRSLPDMSDLESLQVLDLSGCSRLEEIKCFPRNTKELYLAGTSIRELPEFPES---LE 792

Query: 590 VLFVEDCSKLDNL 602
           VL   DC  L ++
Sbjct: 793 VLNAHDCGLLKSV 805



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 162/400 (40%), Gaps = 62/400 (15%)

Query: 547 LGCLNLEHFP-EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL-FVEDCSKLDNLPD 604
           L  L+ E +P E L +   L+ +     P +EL   +E    LE+L  ++ C     +  
Sbjct: 554 LRLLHWEKYPFESLPQGFDLQELVELNMPYSELKKLWETNKNLEMLKRIKLCHSRQLVKF 613

Query: 605 NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSA-MGLL 663
           +I +       L   + +     +  L + LR L+ S C  +  FP     GL   +  L
Sbjct: 614 SIHAQNIELINLQGCTRLENFSGTTKLQH-LRVLNLSGCSNITIFP-----GLPPNIEEL 667

Query: 664 HISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNML---QSL 720
           ++   ++ EIP  I   SS         N E L   +K    L  I LE    L    S 
Sbjct: 668 YLQGTSIEEIPISILARSSQP-------NCEELMNHMKHFPGLEHIDLESVTNLIKGSSY 720

Query: 721 PELPLCLKYLHLIDCKMLQSLPVLP--FCLESLDLTGCNMLRSLPELPLCLQYLNLEDCN 778
            +    L  L++ DC  L+SLP +     L+ LDL+GC+ L  +   P   + L L   +
Sbjct: 721 SQGVCKLVLLNMKDCLQLRSLPDMSDLESLQVLDLSGCSRLEEIKCFPRNTKELYLAGTS 780

Query: 779 MLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKS 838
            +R LPE P  L++L   +C  L+S+         LD    E+L +H             
Sbjct: 781 -IRELPEFPESLEVLNAHDCGLLKSV--------RLD---FEQLPRH------------- 815

Query: 839 AAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLP 898
               + F+NC +L+ +   + +   L R+       +RL  E   N++  +     +  P
Sbjct: 816 ----YTFSNCFRLSLERTVEFIEKGLTRV-------IRLDREQ--NQEHVKAPAFNVCFP 862

Query: 899 GSEIPDWFSNQSSGSS-ICIQLPPHSSCRNLIGFAFCAVL 937
               P W+S Q   S  + + L P    + L GFA   ++
Sbjct: 863 ADACP-WYSFQWQESHFVRVTLAPCMR-KALSGFAMSVLV 900


>gi|297842029|ref|XP_002888896.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334737|gb|EFH65155.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1169

 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 289/1016 (28%), Positives = 454/1016 (44%), Gaps = 200/1016 (19%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            ++S D V+++GIWGMGGIGKTT+AK +++++S  F   CF+ +VR  ++   GL +LQK+
Sbjct: 210  IESEDEVRMIGIWGMGGIGKTTIAKCLYEKYSRRFAHYCFIENVRIAAKN--GLPYLQKK 267

Query: 61   MLSTTLSEKLEVAG--PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            +LS    +K E            K +++  K+ +VLDDV+ V QL  L      FG GSR
Sbjct: 268  LLSNIRGKKQETLWCVEKGCSCIKSKLKD-KIFLVLDDVDNVDQLHALAKNTGWFGPGSR 326

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDL-NWHSRSVVS 177
            I++TTRD  +L  F    + +Y V+ L+  +A + F   AF+    P D+    S     
Sbjct: 327  IIITTRDFGLLYSFG--VRLLYHVSFLDIGDAIQVFKQVAFEGGQAPSDVYQQFSIRASR 384

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHD-IYDILKISFNKLTPRVKS 236
              +G P  LE  G+ L   R+  W +       I E+  H  I DILK S++ L  + ++
Sbjct: 385  LAQGLPSALEAFGTYL---RRITWIEGWEKALGILETVPHQSIMDILKTSYDGLDEQEQA 441

Query: 237  IFLDIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIV 295
             FL +AC F G     V +++DD +      L  KSL+ IS +  + MH ++++  R+IV
Sbjct: 442  AFLHVACLFNGTSVQRVNALIDDGDIRT-KALEAKSLIEISPDGCITMHVLIEQAAREIV 500

Query: 296  RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSK-IKGINLDPRAFTNMSNL 354
            RQES   P ++  LW    I  VL++N GT   EG+ L + + ++ ++++      ++NL
Sbjct: 501  RQESGSMPWRQRILWKTDPIIFVLQNNTGTTTTEGVALHMCEMLQALSIEGNVLNAINNL 560

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            + FK ++           ++ +E    SK++   G D LP  L+ LHWD+YP+ TLP  +
Sbjct: 561  KFFKAFM----------HLNDKE----SKLKFLPGTDMLPNTLKLLHWDSYPMTTLPPGY 606

Query: 415  KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             P  LVELNLR S +   W+G          +   L  L   G +               
Sbjct: 607  YPHCLVELNLRYSSLVHLWDG--------TLDLGQLKRLDVTGSK--------------- 643

Query: 475  TINFSYCVNLIEFPQISGKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
                    NL E P +S        +  G + +++ P SI  L+ L  LDL  C  L  +
Sbjct: 644  --------NLTEIPDLSRAALLKDLIMKGCTRLKQTPESIGSLSCLRKLDLSNCDGLTNL 695

Query: 532  STSFC-------------------------KLRSLVTLILLGCLNLEHFPEILEKMEHLK 566
                                          KL SL  L + G +N+  + +I+   EHL 
Sbjct: 696  QIHISEKIVLREPGLRRRRQIILRLPRAVKKLNSLANLSIEGKINIGLW-DIMGNAEHLS 754

Query: 567  RIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLP 626
             I   + P   +    E LP     F+       +L     S++ + Y   +A  +    
Sbjct: 755  FISEQQIPEEYMVIPKERLP-----FISSFYDFKSL-----SIKRVSY---SADGV---- 797

Query: 627  SSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL 686
                            C    +FP         +  L++ +  +++IP +I  + SLE L
Sbjct: 798  -------------PFRCISFSAFP--------CLVELNLINLNIQKIPVDIGLMQSLEKL 836

Query: 687  YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF 746
             LSGN+F SLPA  K +S+L++  L +   L++ PEL                       
Sbjct: 837  DLSGNDFRSLPASTKNLSKLKYARLSNCIKLKTFPELTE--------------------- 875

Query: 747  CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPE 806
             L++L L+GC+ L SL ELP  +Q     D    R L         L + NC  LQ+L E
Sbjct: 876  -LQTLKLSGCSNLESLLELPCAVQ-----DEGRFRLLE--------LELDNCKNLQALSE 921

Query: 807  ILLCLQELDASVLEKLSKHSPDLQWAPESLK--SAAICFEFTNCLKLNG-----KANNKI 859
             L     L   +   LS H  D    PES+K  S+       NC KL       ++   +
Sbjct: 922  QLSRFTNL---IHLDLSSH--DFDAIPESIKELSSLETMCLNNCKKLKSVEELPQSLKHL 976

Query: 860  LA---DSLLRI---RHMAIASLRLGY-----------EMAINEKLS-ELRGSLIVLPGSE 901
             A   DSL  +   R+ +I  L L +            + +N+K S E+    + LPG+E
Sbjct: 977  YAHGCDSLENVSLSRNHSIKHLDLSHCFGLQQDEQLITLFLNDKCSQEVSQRFLCLPGNE 1036

Query: 902  IPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFD 957
            +P  F NQS G+S  I L   +    L+GFA C ++  ++     F   + +F +D
Sbjct: 1037 VPRNFDNQSHGTSTKISLFTPT----LLGFAACILISCER----SFNLQFPAFSYD 1084


>gi|297791233|ref|XP_002863501.1| hypothetical protein ARALYDRAFT_916966 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309336|gb|EFH39760.1| hypothetical protein ARALYDRAFT_916966 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1064

 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 228/719 (31%), Positives = 348/719 (48%), Gaps = 72/719 (10%)

Query: 71  EVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLE 130
           EV  P    FTKE   +      LD+  + G++++    +D+            +++VL 
Sbjct: 113 EVQDPK--GFTKETFSQ------LDNSVQAGRVQKWREVIDELAHNDECKWIAGNRQVLV 164

Query: 131 KFRGEEKKIYRVNGL-EFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVL 189
           +         +VNGL E ++  E+  +  F  +      +  +  +V Y  G PLVL VL
Sbjct: 165 Q--------CKVNGLYEMQKLSEYESSETFSLSLPGRYDSMLNSELVRYASGIPLVLGVL 216

Query: 190 GSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGED 249
           GS    + K    + L  L +   +EI + +   + SF+ L    K++FLD+ACFF GE+
Sbjct: 217 GSFATNQCKFSEKEQLQMLRQNPPTEILEAF---RRSFDGLNDNEKNMFLDLACFFRGEN 273

Query: 250 KDFVASILDDSE--SDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKR 306
           ++ V  ILD     +D+ +  LID+SL+    N + M ++ Q+MGR +V +ES KEPGKR
Sbjct: 274 RNHVIQILDGCGYFTDLGIYGLIDESLIDPLENKIEMSNVFQDMGRFVVCEES-KEPGKR 332

Query: 307 SRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYE 366
           SRLWD  EI+ VL  N GT+A+EGIFLD+S +    L P  F     LRL K +      
Sbjct: 333 SRLWDANEIANVLTSNSGTEAVEGIFLDMSDLT-CELSPTIFDRTYRLRLLKLHC----- 386

Query: 367 IEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP-SNFKPKNLVELN-- 423
                ++S         + LP GL  LP +LR LHW++YPLR+LP  N +    + L+  
Sbjct: 387 -----AISENR----GTICLPRGLYSLPDELRLLHWESYPLRSLPRENLEKLKKIILSHS 437

Query: 424 ---LRCSKVEQPWEGE----KAC-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
              ++  ++ +    E    + C     V SSI +   L  L+ K C  LR+ P  +H  
Sbjct: 438 RQLIKIPRLSKALNLEHIDLEGCTSLVKVSSSIHHLDKLVFLNLKDCSRLRTLPVMIHLE 497

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
               +N S C +L E    S  +  LYL  +AI E+PSSIE LT L  LDL  C +L+++
Sbjct: 498 SLEVLNLSGCSDLKEIQDFSPNLKELYLAGTAIRELPSSIEKLTRLVTLDLDNCNQLQKL 557

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEI----LEKMEHLKRIYSDRTPIT-ELPSSFENLP 586
                 L+++VTL L GC NL+  P +    L   +HL       T IT E+P S  +  
Sbjct: 558 PQGMSNLKAMVTLKLSGCSNLKSLPNLDAIYLRGTQHLN------TEITMEVPKSLVHHS 611

Query: 587 GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
            +    ++ C  LD L  ++           AAS   Q+ + +   N   S        +
Sbjct: 612 SIHQSRLDHCETLDKLIPDLCLKNAAIQKSLAASVYRQI-AGIRQENWQWSTIKLQPLSI 670

Query: 647 ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
             F  + L  L ++ L   S+  + ++P+EI  L S+ IL L GN F  +P  IK + +L
Sbjct: 671 FHFLASRLYALVSLCL---SNACLVDLPKEICGLPSVNILDLGGNGFSKIPESIKLLPKL 727

Query: 707 RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPEL 765
             + L     L+SLPELP  L  L++  C  ++S   +P+  E L  T  N     PE+
Sbjct: 728 HSLRLRHCKNLKSLPELPQSLVLLNVHGCVSMKS---VPWSFERLQCTFSNCFNLSPEV 783


>gi|28558778|gb|AAO45749.1| MRGH63 [Cucumis melo subsp. melo]
          Length = 943

 Score =  253 bits (646), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 232/782 (29%), Positives = 368/782 (47%), Gaps = 124/782 (15%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+   +VG++G+GG+GKTTLAKA++++ + +FEG CF+ ++R  S   GGL  LQ+++L 
Sbjct: 208 SNGTTMVGLYGIGGMGKTTLAKALYNKIADDFEGCCFLPNIREASNQYGGLVQLQRELLR 267

Query: 64  TTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             L +   +   N+P      + R+   K+L++LDDV+   QL+ L+G  D FG GS+++
Sbjct: 268 EILVDD-SIKVSNLPRGVTIIRNRLYSKKILLILDDVDTREQLQALVGGHDWFGHGSKVI 326

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            TTR+K++L     +  K+  V GL+++EA E F    F+ +H   D    S+  V Y K
Sbjct: 327 ATTRNKQLLVTHGFD--KMQSVVGLDYDEALELFSWHCFRNSHPLNDYLELSKRAVDYCK 384

Query: 181 GNPLVLEVLGSSL-CLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           G PL LEVLGS L  +    ++ ++L +  +    +  +I D L+IS++ L   VK IF 
Sbjct: 385 GLPLALEVLGSFLHSIDDPFNFKRILDEYEKYYLDK--EIQDSLRISYDGLEDEVKEIFC 442

Query: 240 DIACFFEGEDKDFVASILDDSESDVLDILIDK----SLVSISG-NFLNMHDILQEMGRQI 294
            I+C F  ED + V  +L+      L+  I K    SL++I   N + MHDI+Q+MGR I
Sbjct: 443 YISCCFVREDINKVKMMLEACGCICLEKGITKLMNLSLLTIGRFNRVEMHDIIQQMGRTI 502

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
              E+ K   KR RL    +   VLK NK   A++ I  +  K   +++D RAF  + NL
Sbjct: 503 HLSETSKSH-KRKRLLIKDDAMNVLKGNKEARAVKVIKFNFPKPTELDIDSRAFEKVKNL 561

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            +                     ++  +       L+YLP  LR+++W  +P  +LP  +
Sbjct: 562 VVL--------------------EVGNATSSKSTTLEYLPSSLRWMNWPQFPFSSLPPTY 601

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             +NLVEL L       P+        SSI++F       +  C+ L+            
Sbjct: 602 TMENLVELKL-------PY--------SSIKHF----GQGYMSCERLKE----------- 631

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            IN +    L+E P +S  +                     +L+ LDL GC+ L ++  S
Sbjct: 632 -INLTDSNFLVEIPDLSTAI---------------------NLKYLDLVGCENLVKVHES 669

Query: 535 FCKLRSLVTLILLGCL-NLEHFPEILEKMEHLKRIYSDRTPITEL-PSSFENLPGLEVLF 592
              L  LV L L   +   E FP  L K++ LK +      I E  P   E +  +E L 
Sbjct: 670 IGSLNKLVALHLSSSVKGFEQFPSHL-KLKSLKFLSMKNCRIDEWCPQFSEEMKSIEYLS 728

Query: 593 VEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSV-ALSNM--LRSLDSSHCKGLES 648
           +        L   IG L  L ++ L     ++ LPS++  LSN+  L  LDS     L +
Sbjct: 729 IGYSIVTHQLSPTIGYLTSLKHLTLYYCKELTTLPSTIYRLSNLTSLIVLDSD----LST 784

Query: 649 FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
           FP           L H S      +P  + YL+ L ++     N + L  I+     L+ 
Sbjct: 785 FP----------SLNHPS------LPSSLFYLTKLRLVGCKITNLDFLETIVYVAPSLKE 828

Query: 709 IHLEDFNMLQSLPELPLC------LKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSL 762
           + L + N  +    LP C      LKYL+ +DC++L+ +  +P  +      GC  L   
Sbjct: 829 LDLSENNFCR----LPSCIINFKSLKYLYTMDCELLEEISKVPEGVICTSAAGCKSLARF 884

Query: 763 PE 764
           P+
Sbjct: 885 PD 886



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 34/283 (12%)

Query: 551 NLEHFPEILEKMEHLKRI-YSDRTPITELP--SSFENLPGLEVLFVEDCSKLDNLPDNIG 607
           +++HF +     E LK I  +D   + E+P  S+  NL  L+++    C  L  + ++IG
Sbjct: 615 SIKHFGQGYMSCERLKEINLTDSNFLVEIPDLSTAINLKYLDLV---GCENLVKVHESIG 671

Query: 608 SLEYLY--YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHI 665
           SL  L   ++ ++     Q PS + L + L+ L   +C+  E  P+ F   + ++  L I
Sbjct: 672 SLNKLVALHLSSSVKGFEQFPSHLKLKS-LKFLSMKNCRIDEWCPQ-FSEEMKSIEYLSI 729

Query: 666 S-DYAVREIPQEIAYLSSLEILYLS-GNNFESLPAIIKQMSQLRFIHL--EDFNMLQSL- 720
                  ++   I YL+SL+ L L       +LP+ I ++S L  + +   D +   SL 
Sbjct: 730 GYSIVTHQLSPTIGYLTSLKHLTLYYCKELTTLPSTIYRLSNLTSLIVLDSDLSTFPSLN 789

Query: 721 -PELPLCLKYL---HLIDCKM-----LQSLPVLPFCLESLDLTGCNMLRSLPELPLC--- 768
            P LP  L YL    L+ CK+     L+++  +   L+ LDL+  N  R    LP C   
Sbjct: 790 HPSLPSSLFYLTKLRLVGCKITNLDFLETIVYVAPSLKELDLSENNFCR----LPSCIIN 845

Query: 769 ---LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEIL 808
              L+YL   DC +L  + ++P  +   +   C  L   P+ L
Sbjct: 846 FKSLKYLYTMDCELLEEISKVPEGVICTSAAGCKSLARFPDNL 888


>gi|449438044|ref|XP_004136800.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 996

 Score =  253 bits (645), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 225/708 (31%), Positives = 355/708 (50%), Gaps = 102/708 (14%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S+ V+ VGI GMGG+GKTT+AKA+++Q  H FE  CF+S+++  +ET+  L HLQKQ+L
Sbjct: 209 GSNDVRFVGILGMGGLGKTTVAKALYNQLYHNFEAKCFLSNIK--AETSN-LIHLQKQLL 265

Query: 63  STTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           S+ ++    +   NI       +ER+R  +LL++LDDV+++ QL  L    D F  GSRI
Sbjct: 266 SS-ITNSTNINLGNIDQGIAVLQERLRCKRLLLILDDVDDLSQLTALATTRDLFASGSRI 324

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TTRD+ +L +   +E  I  ++ ++ +EA E F   AF+ ++  E  +  S+ V++Y 
Sbjct: 325 IITTRDRHLLNQLEVDE--ICSIDEMDDDEALELFSWHAFRNSYPSETFHQLSKQVITYC 382

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIF 238
            G PL LEVLGS L  + +  W   L  L +I   +I      LKISF+ L     K IF
Sbjct: 383 GGLPLALEVLGSFLFGRSREEWEDTLKKLKKIPNDQIQKK---LKISFDGLNDHTYKDIF 439

Query: 239 LDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISG-NFLNMHDILQEMGRQI 294
           LD++CFF G ++++V  ILD         + +L+ + L++I   N L MHD+L++MGR+I
Sbjct: 440 LDVSCFFIGMERNYVEQILDGCGFFPRIGISVLLQRCLLTIGDKNRLMMHDLLRDMGREI 499

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VR+   K P + SRL+  +E+  VL   KGTDA EG+ L L +     L  +AF  M  L
Sbjct: 500 VRENFPKYPERHSRLFLHEEVLSVLTRQKGTDATEGLSLKLPRFSKQKLSTKAFNEMQKL 559

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL                     QL++  V +     ++ +++R++ W  +PL+ LP  F
Sbjct: 560 RLL--------------------QLNF--VDVNGDFKHISEEIRWVCWHGFPLKFLPKEF 597

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
               LV ++LR S++   W+  K      ++N K+L+               + H++   
Sbjct: 598 HMDKLVAMDLRYSQIRFFWKESKF-----LKNLKFLNL-------------GHSHYLTH- 638

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
           T NFS   NL        ++  L   ++ IE  P +I  L  L  L+L+ CK L  +  S
Sbjct: 639 TPNFSKLPNL--------EILSLKDCKNLIELHP-TIGELKALISLNLKDCKSLNSLPNS 689

Query: 535 FCKLRSLVTLIL--LGCL----------NLEH-FPEILEKMEHLKRIYSDRTP----ITE 577
           F  L+SL TLI+  +G L          NL H  P  +  +  L+ +  D  P    I  
Sbjct: 690 FSNLKSLQTLIISDIGSLSSLRELDLSENLFHSLPSTISGLLKLETLLLDNCPELQFIPN 749

Query: 578 LPSSFENLPGLEVLFVEDCSKLDNLPD-----NIGSLEYLYYILAAASAISQLPSSVALS 632
           LP      P L  L+  +C+ L+   D      +GSL      ++    + ++P    L 
Sbjct: 750 LP------PHLSSLYASNCTSLERTSDLSNVKKMGSLS-----MSNCPKLMEIPGLDKLL 798

Query: 633 NMLRSLDSSHCKGL-ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
           + +R +    C  +  SF  T L G +  G   +     +E+P   AY
Sbjct: 799 DSIRVIHMEGCSNMSNSFKDTILQGWTVSGFGGVC-LPGKEVPDWFAY 845



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 97/220 (44%), Gaps = 40/220 (18%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +T  P+ F  LP LE+L ++DC  L  L   IG L+ L                      
Sbjct: 636 LTHTPN-FSKLPNLEILSLKDCKNLIELHPTIGELKALI--------------------- 673

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFE 694
             SL+   CK L S P +F   L ++  L ISD         I  LSSL  L LS N F 
Sbjct: 674 --SLNLKDCKSLNSLPNSFS-NLKSLQTLIISD---------IGSLSSLRELDLSENLFH 721

Query: 695 SLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC--LESLD 752
           SLP+ I  + +L  + L++   LQ +P LP  L  L+  +C  L+    L     + SL 
Sbjct: 722 SLPSTISGLLKLETLLLDNCPELQFIPNLPPHLSSLYASNCTSLERTSDLSNVKKMGSLS 781

Query: 753 LTGCNMLRSLPELPLCL---QYLNLEDC-NMLRSLPELPL 788
           ++ C  L  +P L   L   + +++E C NM  S  +  L
Sbjct: 782 MSNCPKLMEIPGLDKLLDSIRVIHMEGCSNMSNSFKDTIL 821



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 119/296 (40%), Gaps = 53/296 (17%)

Query: 642 HCKGLESFPRTFLLG-LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAII 700
           H   L+  P+ F +  L AM L +     +R   +E  +L +L+ L L  +++ +     
Sbjct: 586 HGFPLKFLPKEFHMDKLVAMDLRY---SQIRFFWKESKFLKNLKFLNLGHSHYLTHTPNF 642

Query: 701 KQMSQLRFIHLED-FNMLQSLPELP--LCLKYLHLIDCKMLQSLPVLPFCLESLD---LT 754
            ++  L  + L+D  N+++  P +     L  L+L DCK L SLP     L+SL    ++
Sbjct: 643 SKLPNLEILSLKDCKNLIELHPTIGELKALISLNLKDCKSLNSLPNSFSNLKSLQTLIIS 702

Query: 755 GCNMLRSLPELPLCLQYLN----------------LEDCNMLRSLPELPLCLQLLTVRNC 798
               L SL EL L     +                L++C  L+ +P LP  L  L   NC
Sbjct: 703 DIGSLSSLRELDLSENLFHSLPSTISGLLKLETLLLDNCPELQFIPNLPPHLSSLYASNC 762

Query: 799 NRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNK 858
             L+            D S ++K+   S                   +NC KL       
Sbjct: 763 TSLERTS---------DLSNVKKMGSLS------------------MSNCPKLMEIPGLD 795

Query: 859 ILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSS 914
            L DS+  I     +++   ++  I +  +      + LPG E+PDWF+ +   S+
Sbjct: 796 KLLDSIRVIHMEGCSNMSNSFKDTILQGWTVSGFGGVCLPGKEVPDWFAYKDEVST 851


>gi|215261578|gb|ACJ64858.1| disease resistance protein RPP1-like protein R4 [Arabidopsis
            thaliana]
          Length = 1363

 Score =  252 bits (644), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 242/819 (29%), Positives = 390/819 (47%), Gaps = 132/819 (16%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQ 58
            D V+++GIWG  GIGKTT+A  +FD+FS  F  +  ++D+R        +E    L+ LQ
Sbjct: 376  DEVRMIGIWGTPGIGKTTIAACMFDRFSSRFPFAAIMTDIRECYPRLCLNERNAQLK-LQ 434

Query: 59   KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
             QMLS   ++K       I H    +ER++  K+ IVLD+V+ +GQL  L  E   FG G
Sbjct: 435  DQMLSQIFNQK----DIKISHLGVAQERLKDKKVFIVLDEVDHLGQLDALAKETRWFGPG 490

Query: 117  SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPE---DLNWHSR 173
            SRI++TT D+ +L K  G    +Y+V     +EAF+ FC  AF +    E   DL W  +
Sbjct: 491  SRIIITTEDQGIL-KAHG-INHVYKVEYPSNDEAFQIFCMNAFGQKQPCEGFCDLAWEVK 548

Query: 174  SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            ++       PL L+VLGS+L    K  W + L  L    + +I     +++ S++ L   
Sbjct: 549  ALAGEL---PLGLKVLGSALRGMSKPEWERTLPRLKTSLDGKIG---SVIQFSYDALCDE 602

Query: 234  VKSIFLDIACFFEGED----KDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQE 289
             K +FL IAC F  E     K+ +   LD  +   L +L  KSL+S  G  ++MH +L++
Sbjct: 603  DKYLFLYIACLFNDESTTKVKELLGKFLDVRQG--LHVLAQKSLISFYGERIHMHTLLEQ 660

Query: 290  MGRQI-VRQESEKEPGKRSRLWDPKEISRVLKHNKGTD-AIEGIFLDLSKI-KGINLDPR 346
             GR+   +Q       K   L   ++I  VL  +   +    GI LDL K  + +N+  +
Sbjct: 661  FGRETSCKQFVHHGYRKHQLLVGERDICEVLDDDTTDNRRFIGINLDLYKNEEELNISEK 720

Query: 347  AFTNMSNLRLFKFYVPK----FYEI----------EKLPSMSTEEQL-SYSKVQLPNGLD 391
            A   + + +  K  + +    F +I          ++L S++   ++ S  + +    L 
Sbjct: 721  ALERIHDFQFVKINLRQKLLHFVKINDKNHAQKESQRLQSLNIYHRINSIHQPERLQDLI 780

Query: 392  YLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY-- 449
            Y   ++R L W +Y   +LP  F P+ LVEL++  SK+ + WEG K      ++N K+  
Sbjct: 781  YQSPRIRSLKWYSYQNMSLPCTFNPEFLVELDMSSSKLRKLWEGTK-----QLRNLKWMD 835

Query: 450  ------------------LSALSFKGCQSLRSFPSNLHFVCPVT-INFSYCVNLIEFPQI 490
                              L  L  + C SL   PS++  +  +  ++   C +L++ P  
Sbjct: 836  LSDSIDLKELPNLSTATNLEELELRNCSSLMELPSSIEKLTSLQRLDLCDCSSLVKLPP- 894

Query: 491  SGKVTRLY----LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLV--TL 544
            S     L+    +  S + E+P +IE  T+L  L+L+ C  L  +  S    R+L    L
Sbjct: 895  SINANNLWELSLINCSRVVELP-AIENATNLWELNLQNCSSLIELPLSIGTARNLFLKEL 953

Query: 545  ILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLP 603
             + GC +L   P  +  M +L+    S+ + + ELPSS  NL  L  L +  CSKL+ LP
Sbjct: 954  NISGCSSLVKLPSSIGDMTNLEEFDLSNCSNLVELPSSIGNLQNLCELIMRGCSKLEALP 1013

Query: 604  DNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLL 663
             NI +L+ LY                       +LD + C  L+SFP       + +  L
Sbjct: 1014 TNI-NLKSLY-----------------------TLDLTDCSQLKSFPEIS----TNISEL 1045

Query: 664  HISDYAVREIPQ-----------EIAYLSSLEI----------LYLSGNNFESLPAIIKQ 702
             +   A++E+P            +I+Y  SL+           L+LS ++ + +P  +K+
Sbjct: 1046 WLKGTAIKEVPLSIMSWSPLVDFQISYFESLKEFPHALDIITGLWLSKSDIQEVPPWVKR 1105

Query: 703  MSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
            MS+LR + L + N L SLP+LP  L YL+  +CK L+ L
Sbjct: 1106 MSRLRELTLNNCNNLVSLPQLPDSLAYLYADNCKSLERL 1144


>gi|7488167|pir||B71437 probable resistance gene - Arabidopsis thaliana
          Length = 1422

 Score =  252 bits (644), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 295/1114 (26%), Positives = 473/1114 (42%), Gaps = 267/1114 (23%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQK 59
            ++S +   +VGIWG  GIGK+T+ +A+F Q S +F    FV+      S+ +G     QK
Sbjct: 233  LESKEAKIMVGIWGQSGIGKSTIGRALFSQLSSQFPLRAFVTYKSTSGSDVSGMKLSWQK 292

Query: 60   QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            ++LS  L +K       I HF   ++R++  K+LI+LDDV+ +  LK L+G+ + FG GS
Sbjct: 293  ELLSEILGQK----DIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGS 348

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI+V T+D+++L+    E   +Y V       A +    +AF ++  P+D    +  V  
Sbjct: 349  RIIVITQDRQLLKAH--EIDLVYEVKLPSQGLALQMISQYAFGKDSPPDDFKALAFEVAE 406

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                 PL L VLGSSL  + K  W K++  L    + +I +    L++ ++     VK +
Sbjct: 407  LAGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEET---LRVCYDS---NVKEL 460

Query: 238  FLDIACFFEGEDKDFVASILDDSESDV-LDILIDKSLVSISGNF-LNMHDILQEMGRQIV 295
                                   E DV L +L++KSL+ I+ +  + MH++L+++GR+I 
Sbjct: 461  L----------------------EDDVGLTMLVEKSLIRITPDGDIEMHNLLEKLGREID 498

Query: 296  RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFL---DLSKIKGINLDPRAFTNMS 352
            R +S+  PGKR  L + ++I  VL    GT+ + GI L        +   +D + F  M 
Sbjct: 499  RAKSKGNPGKRQFLTNFEDIQEVLAEKTGTEILLGIRLPHPGYLTTRSFLIDEKLFKGMR 558

Query: 353  NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            NL+    Y+   Y               +S   LP  L YLP KLR L W   PL++LPS
Sbjct: 559  NLQ----YLEIGY---------------WSDGDLPQSLVYLPLKLRLLEWVYCPLKSLPS 599

Query: 413  NFKPKNLVELNLRCSKVEQPWEG------------------------------------- 435
             F+ + LV+L ++ SK+E+ WEG                                     
Sbjct: 600  TFRAEYLVKLIMKNSKLEKLWEGTLPLGSLKKMNLWYSKYFKEIPDLSLAINLEELNLSE 659

Query: 436  --EKACVPSSIQ-------------------------NFKYLSA--LSFKGCQSLRSFPS 466
                  +PSSIQ                         N +YLS      +G Q +  FPS
Sbjct: 660  CESLVTLPSSIQNAIKLRTLYCSGVLLIDLKSLEGMCNLEYLSVDCSRMEGTQGIVYFPS 719

Query: 467  NLHFV----CPV-----TINFSYCV----------NLIEFPQISGKVTRLYL-GQSAIEE 506
             L  +    CP+          Y V           L +  Q  G++ +++L G   ++E
Sbjct: 720  KLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKE 779

Query: 507  VPS---SI---ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILE 560
            +P    +I   E    L  LD+  CK+L+   T    L SL  L L GC NL +FP I  
Sbjct: 780  IPDLSLAINLEENAIKLIYLDISDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKM 838

Query: 561  KMEHLKRIYSDRTPITE-------LPSSFENL------------PGLEVLFVEDCSKLDN 601
                +         + E       LP+  + L            P   V     C K + 
Sbjct: 839  GCSDVDFPEGRNEIVVEDCFWNKNLPAGLDYLDCLMRCMPCEFRPEYLVFLNVRCYKHEK 898

Query: 602  LPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAM 660
            L + I SL  L  + L+ +  ++++P     +N L+ L  ++CK L + P T +  L  +
Sbjct: 899  LWEGIQSLGSLEEMDLSESENLTEIPDLSKATN-LKHLYLNNCKSLVTLPST-IGNLQKL 956

Query: 661  GLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLED------ 713
              L + +    E+      LSSLE L LSG ++  + P I K    +++++LE+      
Sbjct: 957  VRLEMKECTGLEVLPTDVNLSSLETLDLSGCSSLRTFPLISK---SIKWLYLENTAIEEI 1013

Query: 714  -------------FNMLQSLPELPLC------LKYLHLIDCKMLQSLP--VLPFCLESLD 752
                          N  +SL  LP        L+ L++  C  L+ LP  V    L  LD
Sbjct: 1014 LDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDVNLSSLGILD 1073

Query: 753  LTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLC------LQLLTVRNCNRLQSLPE 806
            L+GC+ LR+ P +   + +L LE+     ++ E+P C      L++L +  C RL+++  
Sbjct: 1074 LSGCSSLRTFPLISTNIVWLYLENT----AIGEVPCCIEDFTRLRVLLMYCCQRLKNISP 1129

Query: 807  ILLCLQEL----------------DASVLEKLSKH------SPDLQWAPESLKSAAICFE 844
             +  L+ L                DA+V+  +  H      S ++++  E    A   F 
Sbjct: 1130 NIFRLRSLMFADFTDCRGVIKALSDATVVATMEDHVSCVPLSENIEYTCERFWDALESFS 1189

Query: 845  FTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPD 904
            F NC KL   A   IL       +H+A                         LPG EIP 
Sbjct: 1190 FCNCFKLERDARELILRSCF---KHVA-------------------------LPGGEIPK 1221

Query: 905  WFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLD 938
            +F+ ++ G S+ + LP  S  +    F  C V++
Sbjct: 1222 YFTYRAYGDSLTVTLPQSSLSQYFFPFKACVVVE 1255


>gi|399920230|gb|AFP55577.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1035

 Score =  252 bits (644), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 206/650 (31%), Positives = 314/650 (48%), Gaps = 125/650 (19%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KT LA+ ++++ SH+F+   F+ DVR  S T  GL +LQKQ+LS  L E+      N+P 
Sbjct: 230 KTILARLVYEKISHQFDVCIFLDDVRKAS-TDHGLVYLQKQILSQLLKEE------NVPV 282

Query: 80  FTKE----RVRR----MKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEK 131
           +        ++R      +L+VLD+V++  QL+ L+GE D FG  SRI++TTR++ VL  
Sbjct: 283 WNVNGGITMIKRCACNKAVLLVLDNVDQSEQLENLVGEKDWFGLRSRIIITTRNQSVLVT 342

Query: 132 FRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGS 191
             G EK  Y + GL  +EA   F   AFK+    ED   H+ + V Y  G PL L+ LGS
Sbjct: 343 -HGVEKP-YELKGLNKDEALRLFSWEAFKKYEPEEDYAGHTMTFVLYAGGLPLALKTLGS 400

Query: 192 SLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKD 251
            L  +    W   L  L    +     ++D+L++S++ L    K IFLDIACF       
Sbjct: 401 FLYKRSLHSWSSALAKLQNTPDK---TVFDLLRVSYDGLDEMEKKIFLDIACFSSQY--- 454

Query: 252 FVASILDDSESDVLDILIDKSLVSISG--NFLNMHDILQEMGRQIVRQESEKEPGKRSRL 309
                          +L++KSL++IS   N + +HD+++EMG +IVRQES +EPG RS L
Sbjct: 455 ---------------VLVEKSLLTISSFDNQIIIHDLIREMGCEIVRQESYEEPGGRSLL 499

Query: 310 WDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEK 369
           W   +I  V   N GT+  EGIFL L K++  + + +AF+ M  L+L   +         
Sbjct: 500 WLRNDIFHVFAKNTGTEVTEGIFLHLHKLEEADWNLQAFSKMCKLKLLYIH--------- 550

Query: 370 LPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKV 429
                         ++L  G  +LP  LR L W  YP ++LP  F+P +L  L+L  S +
Sbjct: 551 -------------NLRLSLGPKFLPDALRILKWSWYPSKSLPPGFQPDDLTILSLVHSNI 597

Query: 430 EQPWEGEK----------------------ACVPS-----------------SIQNFKYL 450
              W G K                        +P+                 SI   K L
Sbjct: 598 THLWNGIKYLGKLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCTSLVKIHPSIALLKRL 657

Query: 451 SALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR---LYLGQSAIEEV 507
              +F+ C+S++S PS ++     T + S C  L   P+  G++ R   LYLG  A+E++
Sbjct: 658 KIWNFRNCKSIKSLPSEVNMEFLETFDISGCSKLKIIPEFVGQMKRLSKLYLGGPAVEKL 717

Query: 508 PSSIECLTD-LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLK 566
           PSSIE L++ L  LDL G    ++  + F K   + +   L       FP    K  H  
Sbjct: 718 PSSIEHLSESLVELDLSGIVIREQPYSRFLKQNLIASSFGL-------FP---RKSPH-- 765

Query: 567 RIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDN-LPDNIGSLEYLYYI 615
                  P+  L +S ++   L+ L + DC+  +  +P++IGSL  L ++
Sbjct: 766 -------PLIPLLASLKHFSSLKELKLNDCNLCEGEIPNDIGSLSSLRWL 808



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 150/387 (38%), Gaps = 88/387 (22%)

Query: 542 VTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
           +T++ L   N+ H    ++ +  LK I  S    +T  P  F  +P LE L +E C+ L 
Sbjct: 587 LTILSLVHSNITHLWNGIKYLGKLKSIDLSYSINLTRTPD-FTGIPNLEKLVLEGCTSLV 645

Query: 601 NLPDNIGSLEYL-YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSA 659
            +  +I  L+ L  +      +I  LPS V +   L + D S C  L             
Sbjct: 646 KIHPSIALLKRLKIWNFRNCKSIKSLPSEVNM-EFLETFDISGCSKL------------- 691

Query: 660 MGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQS 719
                      + IP+ +  +  L  LYL G   E LP+ I+ +S+             S
Sbjct: 692 -----------KIIPEFVGQMKRLSKLYLGGPAVEKLPSSIEHLSE-------------S 727

Query: 720 LPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM 779
           L EL L           +++  P   F  ++L  +   +       PL           +
Sbjct: 728 LVELDLS--------GIVIREQPYSRFLKQNLIASSFGLFPRKSPHPLI---------PL 770

Query: 780 LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSA 839
           L SL      L+ L + +CN         LC  E+   +    S     L+W      + 
Sbjct: 771 LASLKHFS-SLKELKLNDCN---------LCEGEIPNDIGSLSS-----LRWLELGGNNF 815

Query: 840 AICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSEL-------RG 892
           A+    T+      + NN+ILA    ++R +    L+   E  +  +   +       R 
Sbjct: 816 ALTIARTSRSATFVRNNNQILA----QLRQLLEYVLKRWIEFEVLSRCDMMVRMQETHRR 871

Query: 893 SL----IVLPGSEIPDWFSNQSSGSSI 915
           +L     V+PGSEIP+WF+NQ++ S++
Sbjct: 872 TLQPLEFVIPGSEIPEWFNNQNNPSAV 898


>gi|357468657|ref|XP_003604613.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
 gi|355505668|gb|AES86810.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
          Length = 1637

 Score =  252 bits (644), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 190/576 (32%), Positives = 289/576 (50%), Gaps = 98/576 (17%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML------STTLSEKLEVA 73
           KTT+AKAI+++    FE   F++++R   E   G  +LQ+Q++      +TT  + +E+ 
Sbjct: 165 KTTIAKAIYNKIGRNFEARSFLANIREVWEQVSGQVYLQEQLMHDIFKETTTKIQNIELE 224

Query: 74  GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFR 133
            P      KER+   ++L+VLDDVN++ QL  L G    F  GSRI++TTRDK +L   R
Sbjct: 225 KP----ILKERLCHKRVLLVLDDVNKLDQLNALCGSRRWFAPGSRIIITTRDKHIL---R 277

Query: 134 GEE-KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSS 192
           G++  KIY +  ++  E+ E F              +WH+  + +        LEVLGS 
Sbjct: 278 GKQVDKIYIMKEMDGSESLELF--------------SWHAFKLTT--------LEVLGSY 315

Query: 193 LCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFLDIACFFEGEDKD 251
           L  +    W  VL  L +I   E+H     LKIS++ L     K IFLDI+CFF G D++
Sbjct: 316 LFERELLEWISVLEKLKKIPNDEVHKK---LKISYDGLNDDTQKEIFLDISCFFIGMDRN 372

Query: 252 FVASILDD----SESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESEKEPGKR 306
            V  IL+     +E  +  +L+++SLV +   N L MHD+L++MGR+I+R++S KEP + 
Sbjct: 373 DVIRILNGCGFFAEIGI-SVLVERSLVMVDDKNKLGMHDLLRDMGREIIREKSPKEPEEH 431

Query: 307 SRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYE 366
           SRLW  +++  VL  + GT A+EG+   +          +AF NM  LRL          
Sbjct: 432 SRLWFHEDVLDVLLEHTGTKAVEGLTFKMPGRSTQRFSTKAFENMKKLRL---------- 481

Query: 367 IEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRC 426
                       L  S VQL     YL + LR+LHW+ +PL  +PSNF  +N+V + L  
Sbjct: 482 ------------LQLSGVQLDGDFKYLSRNLRWLHWNGFPLACIPSNFYQRNIVSIELEN 529

Query: 427 SKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIE 486
           S V+  W+         +Q    L  L+      L   P           +FSY  NL  
Sbjct: 530 SSVKLVWK--------EMQRMDQLKILNLSHSHCLTQTP-----------DFSYLPNL-- 568

Query: 487 FPQISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLI 545
                    +L L     + E+  SI  L  + +++L+ C  L  +  +   L+SL TLI
Sbjct: 569 --------EKLVLKDCPRLSEISQSIGHLNKILLINLKNCISLCNLPRNIYTLKSLKTLI 620

Query: 546 LLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
           L GCL ++   E LE+ME L  + ++ T IT++P S
Sbjct: 621 LSGCLMIDKLEEDLEQMESLTTLIANNTAITKVPFS 656



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/420 (34%), Positives = 218/420 (51%), Gaps = 60/420 (14%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
            K+T+AKAI+++    FEG  F++++R   E   G                          
Sbjct: 1231 KSTVAKAIYNKIGRNFEGRSFLANIREVGEQVSG-------------------------- 1264

Query: 80   FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKI 139
              +++   +++L+VLDDVN++ QL  L G    F  GSRI++TTRD  +L   + +  KI
Sbjct: 1265 --QQKDSVIRVLLVLDDVNKLDQLNTLCGSCKWFAPGSRIIITTRDMDILRAKKVD--KI 1320

Query: 140  YRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKS 199
            Y +  +   E+ E F   AFK+    ED +  S +VV Y+ G PL LEVLGS L  +   
Sbjct: 1321 YEMKEMNESESLERFSWHAFKQKSPKEDFSEISINVVKYSGGLPLALEVLGSYLFDREVL 1380

Query: 200  HWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFLDIACFFEGEDKDFVASILD 258
             W  VL  L  I   +   +Y  LKIS++ L     KSIFLDIACFF G D++ V  IL+
Sbjct: 1381 DWICVLEKLQSIPNEQ---VYKRLKISYHGLNDDTEKSIFLDIACFFIGIDRNDVICILN 1437

Query: 259  DSE--SDV-LDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
                 +++ + +L+++SLV +   N L MHD+L++MGR+I+R++S KEP +RSRLW   +
Sbjct: 1438 SCRLFTEIGIKVLVERSLVIVDDKNKLGMHDLLRDMGREIIREKSPKEPEERSRLWFHGD 1497

Query: 315  ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
            +  VL  + GT  +EG+   +          +AF NM  LRL                  
Sbjct: 1498 VLDVLSKHTGTKVVEGLTFKMPGRSAQRFSTKAFENMKKLRL------------------ 1539

Query: 375  TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
                L  S VQL     YL + L++LHW+ +PL  + SNF  +NLV + L  S V+  W+
Sbjct: 1540 ----LQLSGVQLDGDFKYLSRNLKWLHWNGFPLTCIASNFYQRNLVSVVLENSNVKLVWK 1595


>gi|15235932|ref|NP_193429.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5302808|emb|CAB46049.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268447|emb|CAB80967.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|332658428|gb|AEE83828.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1041

 Score =  252 bits (644), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 226/781 (28%), Positives = 370/781 (47%), Gaps = 104/781 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQK 59
           ++S +   +VGIWG  GIGK+T+ +A+F Q S +F    F++      S+ +G     +K
Sbjct: 203 LESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWEK 262

Query: 60  QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           ++LS  L +K       I HF   ++R++  K+LI+LDDV+ +  L+ L+G+ + FG GS
Sbjct: 263 ELLSEILGQK----DIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLRTLVGKAEWFGSGS 318

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+V T+D+++L+    E   IY V       A +  C +AF +   P+D    +  V  
Sbjct: 319 RIIVITQDRQLLKAH--EIDLIYEVKLPSQGLALKMICQYAFGKYSPPDDFKELAFEVAK 376

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                PL L VLGSSL  + K  W ++L +L         DI   L++S+ +L P+ + I
Sbjct: 377 LAGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLN---RDIMKTLRVSYVRLDPKDQDI 433

Query: 238 FLDIACFFEGEDKDFVASILDD--SESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQI 294
           F  IA  F G     +   L D  + +  L  L DKSL+ ++ N  + MH++LQ++  +I
Sbjct: 434 FHYIAWLFNGWKVKSIKDFLGDGVNVNIRLKTLDDKSLIRLTPNDTIEMHNLLQKLATEI 493

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            R+ES   PGKR  L + +EI  V   N                    ++  +F  M NL
Sbjct: 494 DREESNGNPGKRRFLENAEEILDVFTDN-------------------TVNENSFQGMLNL 534

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           +  K +   ++            Q   ++++LPNGL YLP+KL++L WD  PL+ LPSNF
Sbjct: 535 QYLKIHDHSWW------------QPRETRMRLPNGLVYLPRKLKWLWWDNCPLKRLPSNF 582

Query: 415 KPKNLVELNLRCSKVEQPWEGEK---ACVPSSIQNFKYLSA------------LSFKGCQ 459
           K + LVEL +  S +E+ W G +   +     ++N KYL              L    C+
Sbjct: 583 KAEYLVELRMVNSDLEKLWNGTQLLGSLKKMILRNSKYLKEIPDLSYAMNLERLDISDCE 642

Query: 460 SLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTD--L 517
            L SFPS L+      ++   C  L  FP+     T + +    I+      +CL +  L
Sbjct: 643 VLESFPSPLNSESLEYLDLLRCPKLRNFPE-----TIMQISPYGID--IDVADCLWNKSL 695

Query: 518 EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPIT 576
             LD   C  L+R + S      LV L L G   LE   E ++ +  L+R+  S+   + 
Sbjct: 696 PGLDYLDC--LRRCNPSKFLPEHLVNLKLRGNNMLEKLWEGVQSLGKLERMDLSECENLI 753

Query: 577 ELP--SSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSN 633
           E+P  S   NL  L    + +C  L  LP  IG+ + LY + +   + +  LP  V LS+
Sbjct: 754 EIPDLSKATNLVNLN---LSNCKSLVTLPSTIGNHQKLYTLEMKECTGLKVLPMDVNLSS 810

Query: 634 MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP-----QEIAYLS------- 681
            L +++   C  L  FP+       ++ +L++ D A+ E+P       +  LS       
Sbjct: 811 -LHTVNLKGCSSLRFFPQIS----KSIAVLNLDDTAIEEVPCFENFSRLIVLSMRGCKSL 865

Query: 682 --------SLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI 733
                   S++ L L+    E +P  I+  S+L+ +++     L+++      L +L  +
Sbjct: 866 RRFPQISTSIQELNLADTAIEQVPCFIENFSKLKILNMSGCKKLKNISPNIFRLTWLKKV 925

Query: 734 D 734
           D
Sbjct: 926 D 926



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 140/323 (43%), Gaps = 80/323 (24%)

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVE-DCSKLDNLPDNIGSLEYLYYILAAASAIS 623
           LK ++ D  P+  LPS+F+    +E+  V  D  KL N    +GSL+ +  IL  +  + 
Sbjct: 565 LKWLWWDNCPLKRLPSNFKAEYLVELRMVNSDLEKLWNGTQLLGSLKKM--ILRNSKYLK 622

Query: 624 QLPSSVALSNMLRSLDSSHCKGLESFP-------------------RTF---LLGLSAMG 661
           ++P      N+ R LD S C+ LESFP                   R F   ++ +S  G
Sbjct: 623 EIPDLSYAMNLER-LDISDCEVLESFPSPLNSESLEYLDLLRCPKLRNFPETIMQISPYG 681

Query: 662 L-LHISDYAVREIPQEIAYLSSLEI-------------LYLSGNN-FESLPAIIKQMSQL 706
           + + ++D    +    + YL  L               L L GNN  E L   ++ + +L
Sbjct: 682 IDIDVADCLWNKSLPGLDYLDCLRRCNPSKFLPEHLVNLKLRGNNMLEKLWEGVQSLGKL 741

Query: 707 RFIHLEDFNMLQSLPELPLC--LKYLHLIDCKMLQSLP---------------------V 743
             + L +   L  +P+L     L  L+L +CK L +LP                     V
Sbjct: 742 ERMDLSECENLIEIPDLSKATNLVNLNLSNCKSLVTLPSTIGNHQKLYTLEMKECTGLKV 801

Query: 744 LPF-----CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQ------L 792
           LP       L +++L GC+ LR  P++   +  LNL+D     ++ E+P C +      +
Sbjct: 802 LPMDVNLSSLHTVNLKGCSSLRFFPQISKSIAVLNLDDT----AIEEVP-CFENFSRLIV 856

Query: 793 LTVRNCNRLQSLPEILLCLQELD 815
           L++R C  L+  P+I   +QEL+
Sbjct: 857 LSMRGCKSLRRFPQISTSIQELN 879



 Score = 47.4 bits (111), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 32/180 (17%)

Query: 673 IPQEIAYL-SSLEILYLSGNNFESLPAIIKQ--MSQLRFIHLEDFNMLQSLPELPLCLKY 729
           +P  + YL   L+ L+      + LP+  K   + +LR ++  D   L +  +L   LK 
Sbjct: 554 LPNGLVYLPRKLKWLWWDNCPLKRLPSNFKAEYLVELRMVN-SDLEKLWNGTQLLGSLKK 612

Query: 730 LHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSLPELPL---CLQYLNLEDCNMLRSLP 784
           + L + K L+ +P L +   LE LD++ C +L S P  PL    L+YL+L  C  LR+ P
Sbjct: 613 MILRNSKYLKEIPDLSYAMNLERLDISDCEVLESFPS-PLNSESLEYLDLLRCPKLRNFP 671

Query: 785 E----------------------LPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKL 822
           E                      LP    L  +R CN  + LPE L+ L+    ++LEKL
Sbjct: 672 ETIMQISPYGIDIDVADCLWNKSLPGLDYLDCLRRCNPSKFLPEHLVNLKLRGNNMLEKL 731


>gi|255547478|ref|XP_002514796.1| hypothetical protein RCOM_1077370 [Ricinus communis]
 gi|223545847|gb|EEF47350.1| hypothetical protein RCOM_1077370 [Ricinus communis]
          Length = 968

 Score =  252 bits (643), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 202/609 (33%), Positives = 297/609 (48%), Gaps = 112/609 (18%)

Query: 90  LLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEE 149
           +LIVLD++++  Q++ L  E   FG+G+RI++T+RDK V   F+     IY V  L   E
Sbjct: 197 ILIVLDNIDDYEQIELLAEEHTWFGEGNRIIITSRDKSV---FQDRVDGIYEVEALTEHE 253

Query: 150 AFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLN 209
           A   F  FAF+E+H   D    S+ V                      +  W   +  L 
Sbjct: 254 ALHLFRLFAFRESHSKRDHMELSKEVT---------------------QKEWRSKVKKLG 292

Query: 210 RICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDD---SESDVLD 266
           RI + +I +I   LK S+++L    + IFLDIACFF+GE    V   LD    S    L 
Sbjct: 293 RIPDKKIQNI---LKTSYDELDSHDQQIFLDIACFFKGEPIYCVVRFLDACGFSTLIGLK 349

Query: 267 ILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTD 326
           +L DKSLV +    ++MHD+LQEMGRQI+RQES KEPG RSRLW+ ++I  VLK N G+ 
Sbjct: 350 VLADKSLVIMLNEKVDMHDLLQEMGRQIIRQES-KEPGIRSRLWNREDIYHVLKKNTGSG 408

Query: 327 AIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY--------VPKFYEIEKLPSMSTEEQ 378
           AI+G+ LD SK++ I+L  R F NM+ ++LFKF+        V  F ++E +P       
Sbjct: 409 AIKGLCLDKSKLEKISLPTRVFANMNGIKLFKFHNFDSNVDTVRYFKDVEPVP------- 461

Query: 379 LSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA 438
                +  P GL++LP +LR+L W  YP ++LPS+F+P+ L+E+NL  + ++   +  K 
Sbjct: 462 ---ENMVFPEGLEHLPNELRFLQWHFYPEKSLPSSFQPEKLLEINLSVAVLK---DFGKE 515

Query: 439 C----------------------------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
           C                            V  SI     L  L    C  + S PS    
Sbjct: 516 CRELTEMPNFSSAPDLRMIDCVGCISLVEVSPSIGCLNKLHTLILAYCSRITSVPS---I 572

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
              V +N +YC  + +FPQ+   +  L L  + + EVP SI   +   +L+LRGC +LK 
Sbjct: 573 KSVVLLNLAYC-PINKFPQLPLTIRVLNLSGTELGEVP-SIGFHSRPLILNLRGCIKLKI 630

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
           +  SF  LR L++L    CLN+      +  +  L+ +    T +  LPS+ + L  LE 
Sbjct: 631 LPDSFFGLRDLMSLDCAPCLNISQLESNISLITSLRFLCLVGTDLESLPSAIQQLSILEE 690

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           L +    +L +LP                    +LP        L  LD SHC  L+   
Sbjct: 691 LNLCFSRRLRSLP--------------------KLPPH------LHRLDVSHCTSLQ-LD 723

Query: 651 RTFLLGLSA 659
            T L+G+  
Sbjct: 724 STSLIGIQG 732



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 186/425 (43%), Gaps = 63/425 (14%)

Query: 555 FPEILEKM-EHLKRIYSDRTPITELPSSFENLPGLEVL--------FVEDCSKLDNLPDN 605
           FPE LE +   L+ +     P   LPSSF+    LE+         F ++C +L  +P+ 
Sbjct: 466 FPEGLEHLPNELRFLQWHFYPEKSLPSSFQPEKLLEINLSVAVLKDFGKECRELTEMPNF 525

Query: 606 IGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHI 665
             + +          ++ ++  S+   N L +L  ++C  + S P      + ++ LL++
Sbjct: 526 SSAPDLRMIDCVGCISLVEVSPSIGCLNKLHTLILAYCSRITSVP-----SIKSVVLLNL 580

Query: 666 SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
           +   + + PQ      ++ +L LSG     +P+I      L  ++L     L+ LP+   
Sbjct: 581 AYCPINKFPQ---LPLTIRVLNLSGTELGEVPSIGFHSRPL-ILNLRGCIKLKILPDSFF 636

Query: 726 CLKYLHLIDC------KMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLN-LEDCN 778
            L+ L  +DC        L+S   L   L  L L G +    L  LP  +Q L+ LE+ N
Sbjct: 637 GLRDLMSLDCAPCLNISQLESNISLITSLRFLCLVGTD----LESLPSAIQQLSILEELN 692

Query: 779 M-----LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAP 833
           +     LRSLP+LP  L  L V +C  LQ           LD++ L  +  +     W  
Sbjct: 693 LCFSRRLRSLPKLPPHLHRLDVSHCTSLQ-----------LDSTSLIGIQGY-----WGK 736

Query: 834 ESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEM---AINEKLSEL 890
                      F +C  LN K    IL  +  R+  +A A  +L  E    + N  +   
Sbjct: 737 ---------LFFCDCTSLNHKEIRSILMHAHKRVLLLAHAPGKLYKEFNTSSKNHSVEWK 787

Query: 891 RGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYF 950
           R  ++++PG+ IP W S+QSSG S+ I LPP +   N +GFA   V +  K   D   ++
Sbjct: 788 RKFVVIIPGNIIPKWISDQSSGYSVTIPLPP-NWFHNFLGFAVGIVFEFGKCTYDAMGFY 846

Query: 951 YVSFQ 955
           ++  +
Sbjct: 847 WMRLE 851


>gi|357471469|ref|XP_003606019.1| Resistance protein [Medicago truncatula]
 gi|357499467|ref|XP_003620022.1| Resistance protein [Medicago truncatula]
 gi|355495037|gb|AES76240.1| Resistance protein [Medicago truncatula]
 gi|355507074|gb|AES88216.1| Resistance protein [Medicago truncatula]
          Length = 822

 Score =  252 bits (643), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 203/621 (32%), Positives = 305/621 (49%), Gaps = 114/621 (18%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V +VGI+G+GG GK+TLA+AI++  + +FEG CF+  VR NS  +  L+  Q+ +LS 
Sbjct: 216 DGVHMVGIYGIGGSGKSTLARAIYNFVADQFEGLCFLEQVRENS-ASNSLKRFQEMLLSK 274

Query: 65  TLSEKLEVA----GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           TL  K+++A    G +I    KER+ R K+L++LDDV+ + QL  L G +D FG GSR++
Sbjct: 275 TLQLKIKLADVSEGISI---IKERLCRKKILLILDDVDNMKQLNALAGGVDWFGPGSRVI 331

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK +L     E +K Y V GL   EA E     AFK +  P         VV+Y  
Sbjct: 332 ITTRDKHLLACH--EIEKTYAVKGLNVTEALELLRWMAFKNDKVPSSYEKILNRVVAYAS 389

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G P+V+E++GS+L  K        L    +I   EI  I   LK+S++ L    +S+FLD
Sbjct: 390 GLPVVIEIVGSNLFGKNIEECKNTLDWYEKIPNKEIQRI---LKVSYDSLEEEEQSVFLD 446

Query: 241 IACFFEGEDKDFVASILDDSESDVL----DILIDKSLVSI--SGNFLNMHDILQEMGRQI 294
           IAC F+G   + V  IL       +    ++L++K L+      + +++H++++ MG+++
Sbjct: 447 IACCFKGCKWEKVKEILHAHYGHCINHHVEVLVEKCLIDHFEYDSHVSLHNLIENMGKEL 506

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSN 353
           VR ES  EPGKRSRLW  K+I  VL+ N GT  IE I+++L  ++  I+ + +AF  M++
Sbjct: 507 VRLESPFEPGKRSRLWFEKDIFEVLEENTGTSKIEMIYMNLHSMESVIDKNGKAFKKMTH 566

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           L+   F     Y I+                     L YLP+ LR +             
Sbjct: 567 LK--TFITENGYHIQ--------------------SLKYLPRSLRVM------------- 591

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACV---PSSI---QNFKYLSALSFKGCQSLRSFPSN 467
                                  K C+   PSS    +  + +  L F  CQ L   P  
Sbjct: 592 -----------------------KGCILRSPSSSSLNKKLENMKVLIFDNCQDLIYTPDV 628

Query: 468 LHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKR 527
                    +F+ C NL+                     + +S+  L  LE+L+  GC++
Sbjct: 629 SWLPNLEKFSFARCHNLVT--------------------IHNSLRYLNRLEILNAEGCEK 668

Query: 528 LKRISTSFCKLRS--LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL 585
           L+    SF  L+S  L  L L  C +L+ FPE+L KM ++K I    T I E P SF+NL
Sbjct: 669 LE----SFPPLQSPSLQNLELSNCKSLKSFPELLCKMTNIKSILLKETSIGEFPFSFQNL 724

Query: 586 PGLEVLFVEDCSKLDNLPDNI 606
             L  L +      DNL  N+
Sbjct: 725 SELRHLTISG----DNLKINL 741



 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 45/191 (23%)

Query: 672 EIPQEIAYLSSLEILYLSGNNFESL----PAIIKQMSQLRFIHLEDFNMLQSLPELPLCL 727
           E+ +E    S +E++Y++ ++ ES+        K+M+ L+    E+   +QSL  LP  L
Sbjct: 529 EVLEENTGTSKIEMIYMNLHSMESVIDKNGKAFKKMTHLKTFITENGYHIQSLKYLPRSL 588

Query: 728 KYLHLIDC-----------KMLQSLPVLPF--C--------------LESLDLTGC---- 756
           + +    C           K L+++ VL F  C              LE      C    
Sbjct: 589 RVMK--GCILRSPSSSSLNKKLENMKVLIFDNCQDLIYTPDVSWLPNLEKFSFARCHNLV 646

Query: 757 ---NMLRSLPELPLCLQYLNLEDCNMLRSLPELPL-CLQLLTVRNCNRLQSLPEILLCLQ 812
              N LR L  L +    LN E C  L S P L    LQ L + NC  L+S PE+L  + 
Sbjct: 647 TIHNSLRYLNRLEI----LNAEGCEKLESFPPLQSPSLQNLELSNCKSLKSFPELLCKMT 702

Query: 813 ELDASVLEKLS 823
            + + +L++ S
Sbjct: 703 NIKSILLKETS 713



 Score = 40.4 bits (93), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 39/218 (17%)

Query: 522 LRGCKRLKRISTSFCK-LRSLVTLILLGCLNLEHFPEI--LEKMEHLKRIYSDRTPITEL 578
           ++GC      S+S  K L ++  LI   C +L + P++  L  +E  K  ++    +  +
Sbjct: 591 MKGCILRSPSSSSLNKKLENMKVLIFDNCQDLIYTPDVSWLPNLE--KFSFARCHNLVTI 648

Query: 579 PSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSL 638
            +S   L  LE+L  E C KL++ P                    Q PS       L++L
Sbjct: 649 HNSLRYLNRLEILNAEGCEKLESFPP------------------LQSPS-------LQNL 683

Query: 639 DSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPA 698
           + S+CK L+SFP   L  ++ +  + + + ++ E P     LS L  L +SG+N      
Sbjct: 684 ELSNCKSLKSFPE-LLCKMTNIKSILLKETSIGEFPFSFQNLSELRHLTISGDNL----- 737

Query: 699 IIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCK 736
              +++ LR + L++    +    +P  L+      CK
Sbjct: 738 ---KINLLRILRLDECKCFEEDRGIPSNLEKFSGFQCK 772


>gi|105922359|gb|ABF81412.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 520

 Score =  252 bits (643), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 164/432 (37%), Positives = 242/432 (56%), Gaps = 36/432 (8%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+ ++D+   +F GSCF+++VR       GL  LQ+Q+LS  +S +L  A  +   
Sbjct: 117 KTTVARVLYDRIRWQFGGSCFLANVREVFAEKDGLCRLQEQLLS-EISMELPTARDSSRR 175

Query: 80  --FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
               K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+R+K VL+       
Sbjct: 176 IDLIKRRLRLKKVLLILDDVDDEEQLQMLAAEHGTFGPGSRIIITSRNKHVLDSH--GVT 233

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           +IY    L  ++A   F   AFK +   EDL+  S+ VV Y  G PL LEV+GS L  + 
Sbjct: 234 RIYEAEKLNDKDALILFSWKAFKRDQPAEDLSELSKQVVGYANGLPLALEVIGSFLHKRG 293

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W   +  +N I + +   I D+L+ISF+ L    K IFLDIACF +G  KD +  +L
Sbjct: 294 LREWKSAIDRMNDIPDRK---IIDVLRISFDGLHELEKKIFLDIACFLKGMKKDRITRLL 350

Query: 258 DDS--ESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
           D     +D+ +  LI+KSL+ +S + + MH++LQ+MG +IVR ES +EPG+RSRL   K+
Sbjct: 351 DSCGFHADIGMQALIEKSLIRVSRDEIRMHNLLQKMGEEIVRCESPEEPGRRSRLCTYKD 410

Query: 315 ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
           +   LK + G   IE IF+DL K K    +  AF+ M+ LRL K +              
Sbjct: 411 VCDALKDSTGK--IESIFVDLPKAKEAPWNMTAFSKMTKLRLLKIH-------------- 454

Query: 375 TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
                    V L  G +YL  +LR+L W  YP ++LP+ ++   LVEL + CS +EQ W 
Sbjct: 455 --------NVDLSEGPEYLSNELRFLEWHAYPSKSLPACYRLDELVELYMSCSSIEQLWC 506

Query: 435 GEKACVPSSIQN 446
           G K  +P  + N
Sbjct: 507 GCKY-IPELVAN 517


>gi|297825393|ref|XP_002880579.1| hypothetical protein ARALYDRAFT_900967 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326418|gb|EFH56838.1| hypothetical protein ARALYDRAFT_900967 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1158

 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 209/695 (30%), Positives = 316/695 (45%), Gaps = 90/695 (12%)

Query: 6   TVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTT 65
             QI GI GM GIGKT LA+  FD++         +  +   S+   G + + K      
Sbjct: 228 VTQIFGIVGMTGIGKTILAQKHFDKWKKRLAIDKMLLGIHERSKNEEGSDWVIKD----- 282

Query: 66  LSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
                            +++ + K  I LDDV+E  Q++ L+  L +  +GS+IV+TTRD
Sbjct: 283 ----------------DDKIFKRKSFIFLDDVSEKTQIQSLLDNLHRVKKGSKIVITTRD 326

Query: 126 KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAF-KENHCP-EDLNWHSRSVVSYTKGNP 183
           K  + +   +    Y V GL  +EA + F   AF  +++ P +++   S+  V Y  GNP
Sbjct: 327 KSWIGEVVHD---TYVVPGLNEKEALQLFHYHAFHNQDYTPTQNITKLSKKFVDYAGGNP 383

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L L  LG  LC K ++ W   +  L   C     +I   LKIS++KLT + K  FLDIAC
Sbjct: 384 LALVELGKELCGKNETLWETRIETLPHCCN---ENIKRELKISYDKLTDQQKDAFLDIAC 440

Query: 244 FFEGEDKDFVASIL-------DDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
           FF  ED+D + ++L        D  + V+  L  K ++S+S   + M DIL  +G+++  
Sbjct: 441 FFRSEDEDCLKNLLASEVSHESDEAAGVIGDLAHKFMISVSAGQIEMPDILCSLGKELGL 500

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTD--AIEGIFLDLSKIKG-INLDPRAFTNMSN 353
             S  +  ++SRLWD   +S+ L   +  +   + GI LD+SK+K  I +     T M N
Sbjct: 501 FAS-ADNLRKSRLWDHNAVSKALAGKEENEDITVRGILLDVSKLKEEIAIATNKLTLMPN 559

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LR  K +          P      +    KV +P+ L+   K +RY HW  +P   LP +
Sbjct: 560 LRYLKIFD------SSCPRQCKVVEAVECKVYVPDELELCLKNIRYFHWLKFPSMELPPD 613

Query: 414 FKPKNLVELNLRCSKVEQPWEGEK----------------------------------AC 439
           F P+NLV+L L  SK+E+ W+  K                                   C
Sbjct: 614 FNPENLVDLRLPYSKIERVWDDVKDTPNLKWVDLSHSTKLIDLSALWKAESLERLNLEGC 673

Query: 440 V-----PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
                 P    N K L+ L+ +GC SL   P   +F C  T+  S C +  +F   S  +
Sbjct: 674 TNLELFPKDEGNMKSLAFLNLRGCTSLSFLPEMENFDCLKTLILSGCTSFEDFQVKSKNL 733

Query: 495 TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
             L+L  + I ++P +I  L  L VL+L+ CK L  +     KL++L  LIL GC  L  
Sbjct: 734 EYLHLDGTEITDLPQTIVELQRLIVLNLKDCKMLDTLPDCLGKLKALEELILSGCSRLRS 793

Query: 555 FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
           FPEI + ME+L+ +  D T I +LP        L      D   L   P   G       
Sbjct: 794 FPEIKDNMENLQILLLDGTKIRDLPKIL-----LRCANSVDQMNLQRSPSMSGLSLLRRL 848

Query: 615 ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            L+    I  L SS++    L+ +D  +C  L+S 
Sbjct: 849 CLSRNEMIISLQSSISDLYHLKWIDLKYCTKLQSI 883



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 143/561 (25%), Positives = 238/561 (42%), Gaps = 106/561 (18%)

Query: 554  HFPEILEK-MEHLKRIYSDRTPITELPSSF--ENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
            + P+ LE  +++++  +  + P  ELP  F  ENL  L + +    SK++ + D++    
Sbjct: 585  YVPDELELCLKNIRYFHWLKFPSMELPPDFNPENLVDLRLPY----SKIERVWDDVKDTP 640

Query: 611  YLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA 669
             L ++ L+ ++ +  L S++  +  L  L+   C  LE FP+     + ++  L++    
Sbjct: 641  NLKWVDLSHSTKLIDL-SALWKAESLERLNLEGCTNLELFPKD-EGNMKSLAFLNLRGCT 698

Query: 670  VREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLK 728
                  E+     L+ L LSG  +FE      K +  L     E  ++ Q++ EL   L 
Sbjct: 699  SLSFLPEMENFDCLKTLILSGCTSFEDFQVKSKNLEYLHLDGTEITDLPQTIVELQR-LI 757

Query: 729  YLHLIDCKMLQSLPVLPF---CLESLDLTGCNMLRSLPELPLCLQYLN--LEDCNMLRSL 783
             L+L DCKML +LP        LE L L+GC+ LRS PE+   ++ L   L D   +R L
Sbjct: 758  VLNLKDCKMLDTLPDCLGKLKALEELILSGCSRLRSFPEIKDNMENLQILLLDGTKIRDL 817

Query: 784  PELPL-C--------------------------------------------LQLLTVRNC 798
            P++ L C                                            L+ + ++ C
Sbjct: 818  PKILLRCANSVDQMNLQRSPSMSGLSLLRRLCLSRNEMIISLQSSISDLYHLKWIDLKYC 877

Query: 799  NRLQS---LPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKA 855
             +LQS   LP  L CL   D + L+ ++  SP  +  P + +     F FTNC KL   A
Sbjct: 878  TKLQSISMLPPNLQCLDAHDCTSLKTVA--SPLAR--PLATEQVPSSFIFTNCQKLEHAA 933

Query: 856  NNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSI 915
             N+I      + R ++    R    +     ++         PGSE+PDWF ++SSG+ +
Sbjct: 934  KNEITCYGHNKGRLLSKTLNRHNKGLCFEALVA------TCFPGSEVPDWFGHKSSGAVL 987

Query: 916  CIQLPPHSSCRNLIGFAFCAVL--DSKKVDSDCFRYFYV---------SFQFDLEIKTLS 964
              +LP H S    +G A CA++  + +K+ ++  +   +         S  F+  +  LS
Sbjct: 988  EPELPRHWSENGFVGIALCAIVSFEEQKIRNNNLQVKCICDFNNVRTSSSYFNSPVGGLS 1047

Query: 965  ETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNV------GFPDGYHHTIATFKF-----F 1013
            ET     G   R I+    S  V +G+   LN+          G   T A+ KF      
Sbjct: 1048 ET-----GNEHRTIK----STHVFIGYTNWLNIKKCQEDDGKKGCFPTKASIKFQVTDDI 1098

Query: 1014 AERKFYKIKRCGLCPVYANPS 1034
             E K  ++ +CG   VY   S
Sbjct: 1099 GEVKNCEVLKCGFSLVYETGS 1119


>gi|15223555|ref|NP_176047.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9954758|gb|AAG09109.1|AC009323_20 Putative disease resistance protein [Arabidopsis thaliana]
 gi|332195284|gb|AEE33405.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1096

 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 211/691 (30%), Positives = 321/691 (46%), Gaps = 125/691 (18%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-LQKQMLS 63
           D  +IVGI G  GIGK+T+A+A+    S  F+ +CF+ ++   S   G +E+ L+ ++  
Sbjct: 207 DGAKIVGISGPAGIGKSTIARALHSVLSKRFQHNCFMDNLH-ESYKIGLVEYGLRLRLQE 265

Query: 64  TTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             LS+ L + G  I H    +ER+   K+LI+LDDV  + QL  L   ++ FG GSR++V
Sbjct: 266 QLLSKILNLDGIRIAHLGVIRERLHDQKVLIILDDVESLDQLDAL-ANIEWFGPGSRVIV 324

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TT +K +L++    +  IY V     +EA   FC  AF++   P+     +  V      
Sbjct: 325 TTENKEILQQHGISD--IYHVGFPSSKEALMIFCLSAFRQLSPPDRFMNLAAEVAKLCGY 382

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L VLGSSL  K  S W + L  L    +  I  +   LK+ +  L  + +++FL I
Sbjct: 383 LPLALHVLGSSLRGKNYSDWIEELPRLQTCLDGRIESV---LKVGYESLHEKDQALFLYI 439

Query: 242 ACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI---SGNFLNMHDILQEMGRQIV 295
           A FF  +  D+V S+L  +  +V   L IL ++ L+ I   +   + MH +L+ M RQ++
Sbjct: 440 AVFFNYQHADYVTSMLAKTNLNVRLGLKILANRHLIHIGHGAKGIVVMHRLLKVMARQVI 499

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
              S++EP KR  L D +EIS VL++ +G  +I GI  D+ +I  + +  +AF  M NL 
Sbjct: 500 ---SKQEPWKRQILVDTQEISYVLENAEGNGSIAGISFDVGEINKLTISAKAFERMHNLL 556

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
           L K Y P F                  +V +P  +D+LP +L  L WD Y  +TLP  F 
Sbjct: 557 LLKVYDPWF--------------TGKGQVHIPEEMDFLP-RLSLLRWDAYTRKTLPRRFC 601

Query: 416 PKNLVELNLRCSKVEQPWEGEK----------------------------------ACV- 440
           P+NLVELN+  S++E+ WEG +                                   CV 
Sbjct: 602 PENLVELNMPDSQLEKLWEGTQLLANLKTMKLSRSSRLKELPNLSNAKNLERLDLHECVA 661

Query: 441 ----PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR 496
               PSSI N   L  L    C+ L+  P+  + V    I    C+ L  FP I   + R
Sbjct: 662 LLELPSSISNLHKLYFLETNHCRRLQVIPTLTNLVSLEDIKMMGCLRLKSFPDIPANIIR 721

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
           L + ++ I E P+S+   + +E  D+ G   LK  ST    L + VT             
Sbjct: 722 LSVMETTIAEFPASLRHFSHIESFDISGSVNLKTFST---LLPTSVT------------- 765

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
                      ++ D + I  +    + L  L VL + +C KL +LP             
Sbjct: 766 ----------ELHIDNSGIESITDCIKGLHNLRVLALSNCKKLTSLP------------- 802

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
                  +LPSS      L+ L +SHC+ LE
Sbjct: 803 -------KLPSS------LKWLRASHCESLE 820



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 151/376 (40%), Gaps = 112/376 (29%)

Query: 585 LPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSH 642
           L  L+ + +   S+L  LP+  N  +LE L   L    A+ +LPSS++  + L  L+++H
Sbjct: 625 LANLKTMKLSRSSRLKELPNLSNAKNLERLD--LHECVALLELPSSISNLHKLYFLETNH 682

Query: 643 CKGLESFPR-TFLLGL---SAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPA 698
           C+ L+  P  T L+ L     MG L +  +   +IP  I  LS +E            PA
Sbjct: 683 CRRLQVIPTLTNLVSLEDIKMMGCLRLKSFP--DIPANIIRLSVME------TTIAEFPA 734

Query: 699 IIKQMSQLRFIHLEDFNMLQSL------PELPLCLKYLHLIDCKMLQSLPVLPFCLESLD 752
            ++      F H+E F++  S+        LP  +  LH ID   ++S+     C++ L 
Sbjct: 735 SLRH-----FSHIESFDISGSVNLKTFSTLLPTSVTELH-IDNSGIESITD---CIKGLH 785

Query: 753 LTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQ 812
                           L+ L L +C  L SLP+LP  L+ L   +C  L+          
Sbjct: 786 ---------------NLRVLALSNCKKLTSLPKLPSSLKWLRASHCESLE---------- 820

Query: 813 ELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAI 872
                V E L+  + DL              +F+NC KL+ +A   I     +  R +  
Sbjct: 821 ----RVSEPLNTPNADL--------------DFSNCFKLDRQARQAIFQQRFVDGRAL-- 860

Query: 873 ASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFA 932
                                   LPG ++P  F +++ G+S+ I   P+S+      + 
Sbjct: 861 ------------------------LPGRKVPALFDHRARGNSLTI---PNSA-----SYK 888

Query: 933 FCAVL----DSKKVDS 944
            C V+    D K  DS
Sbjct: 889 VCVVISTEFDHKDRDS 904



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 127/308 (41%), Gaps = 68/308 (22%)

Query: 498 YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPE 557
           + G+  +  +P  ++ L  L +L      R K +   FC   +LV L +     LE   E
Sbjct: 565 FTGKGQVH-IPEEMDFLPRLSLLRWDAYTR-KTLPRRFCP-ENLVELNMPDS-QLEKLWE 620

Query: 558 ILEKMEHLKRIYSDRTP-ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
             + + +LK +   R+  + ELP+   N   LE L + +C  L  LP +I +L  LY+  
Sbjct: 621 GTQLLANLKTMKLSRSSRLKELPN-LSNAKNLERLDLHECVALLELPSSISNLHKLYF-- 677

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR-TFLLGL---SAMGLLHISDYAVRE 672
                                L+++HC+ L+  P  T L+ L     MG L +  +   +
Sbjct: 678 ---------------------LETNHCRRLQVIPTLTNLVSLEDIKMMGCLRLKSFP--D 714

Query: 673 IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSL------PELPLC 726
           IP  I  LS +E            PA ++      F H+E F++  S+        LP  
Sbjct: 715 IPANIIRLSVME------TTIAEFPASLRH-----FSHIESFDISGSVNLKTFSTLLPTS 763

Query: 727 LKYLH--------LIDC-KMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDC 777
           +  LH        + DC K L +L VL        L+ C  L SLP+LP  L++L    C
Sbjct: 764 VTELHIDNSGIESITDCIKGLHNLRVLA-------LSNCKKLTSLPKLPSSLKWLRASHC 816

Query: 778 NMLRSLPE 785
             L  + E
Sbjct: 817 ESLERVSE 824


>gi|357499453|ref|XP_003620015.1| Resistance protein [Medicago truncatula]
 gi|355495030|gb|AES76233.1| Resistance protein [Medicago truncatula]
          Length = 1065

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 203/621 (32%), Positives = 305/621 (49%), Gaps = 114/621 (18%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V +VGI+G+GG GK+TLA+AI++  + +FEG CF+  VR NS  +  L+  Q+ +LS 
Sbjct: 216 DGVHMVGIYGIGGSGKSTLARAIYNFVADQFEGLCFLEQVRENS-ASNSLKRFQEMLLSK 274

Query: 65  TLSEKLEVA----GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           TL  K+++A    G +I    KER+ R K+L++LDDV+ + QL  L G +D FG GSR++
Sbjct: 275 TLQLKIKLADVSEGISI---IKERLCRKKILLILDDVDNMKQLNALAGGVDWFGPGSRVI 331

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK +L     E +K Y V GL   EA E     AFK +  P         VV+Y  
Sbjct: 332 ITTRDKHLLACH--EIEKTYAVKGLNVTEALELLRWMAFKNDKVPSSYEKILNRVVAYAS 389

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G P+V+E++GS+L  K        L    +I   EI  I   LK+S++ L    +S+FLD
Sbjct: 390 GLPVVIEIVGSNLFGKNIEECKNTLDWYEKIPNKEIQRI---LKVSYDSLEEEEQSVFLD 446

Query: 241 IACFFEGEDKDFVASILDDSESDVL----DILIDKSLVSI--SGNFLNMHDILQEMGRQI 294
           IAC F+G   + V  IL       +    ++L++K L+      + +++H++++ MG+++
Sbjct: 447 IACCFKGCKWEKVKEILHAHYGHCINHHVEVLVEKCLIDHFEYDSHVSLHNLIENMGKEL 506

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSN 353
           VR ES  EPGKRSRLW  K+I  VL+ N GT  IE I+++L  ++  I+ + +AF  M++
Sbjct: 507 VRLESPFEPGKRSRLWFEKDIFEVLEENTGTSKIEMIYMNLHSMESVIDKNGKAFKKMTH 566

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           L+   F     Y I+                     L YLP+ LR +             
Sbjct: 567 LK--TFITENGYHIQ--------------------SLKYLPRSLRVM------------- 591

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACV---PSSI---QNFKYLSALSFKGCQSLRSFPSN 467
                                  K C+   PSS    +  + +  L F  CQ L   P  
Sbjct: 592 -----------------------KGCILRSPSSSSLNKKLENMKVLIFDNCQDLIYTPDV 628

Query: 468 LHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKR 527
                    +F+ C NL+                     + +S+  L  LE+L+  GC++
Sbjct: 629 SWLPNLEKFSFARCHNLVT--------------------IHNSLRYLNRLEILNAEGCEK 668

Query: 528 LKRISTSFCKLRS--LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENL 585
           L+    SF  L+S  L  L L  C +L+ FPE+L KM ++K I    T I E P SF+NL
Sbjct: 669 LE----SFPPLQSPSLQNLELSNCKSLKSFPELLCKMTNIKSILLKETSIGEFPFSFQNL 724

Query: 586 PGLEVLFVEDCSKLDNLPDNI 606
             L  L +      DNL  N+
Sbjct: 725 SELRHLTISG----DNLKINL 741



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 45/191 (23%)

Query: 672 EIPQEIAYLSSLEILYLSGNNFESL----PAIIKQMSQLRFIHLEDFNMLQSLPELPLCL 727
           E+ +E    S +E++Y++ ++ ES+        K+M+ L+    E+   +QSL  LP  L
Sbjct: 529 EVLEENTGTSKIEMIYMNLHSMESVIDKNGKAFKKMTHLKTFITENGYHIQSLKYLPRSL 588

Query: 728 KYLHLIDC-----------KMLQSLPVLPF--C--------------LESLDLTGC---- 756
           + +    C           K L+++ VL F  C              LE      C    
Sbjct: 589 RVMK--GCILRSPSSSSLNKKLENMKVLIFDNCQDLIYTPDVSWLPNLEKFSFARCHNLV 646

Query: 757 ---NMLRSLPELPLCLQYLNLEDCNMLRSLPELPL-CLQLLTVRNCNRLQSLPEILLCLQ 812
              N LR L  L +    LN E C  L S P L    LQ L + NC  L+S PE+L  + 
Sbjct: 647 TIHNSLRYLNRLEI----LNAEGCEKLESFPPLQSPSLQNLELSNCKSLKSFPELLCKMT 702

Query: 813 ELDASVLEKLS 823
            + + +L++ S
Sbjct: 703 NIKSILLKETS 713



 Score = 40.4 bits (93), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 39/218 (17%)

Query: 522 LRGCKRLKRISTSFCK-LRSLVTLILLGCLNLEHFPEI--LEKMEHLKRIYSDRTPITEL 578
           ++GC      S+S  K L ++  LI   C +L + P++  L  +E  K  ++    +  +
Sbjct: 591 MKGCILRSPSSSSLNKKLENMKVLIFDNCQDLIYTPDVSWLPNLE--KFSFARCHNLVTI 648

Query: 579 PSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSL 638
            +S   L  LE+L  E C KL++ P                    Q PS       L++L
Sbjct: 649 HNSLRYLNRLEILNAEGCEKLESFPP------------------LQSPS-------LQNL 683

Query: 639 DSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPA 698
           + S+CK L+SFP   L  ++ +  + + + ++ E P     LS L  L +SG+N      
Sbjct: 684 ELSNCKSLKSFPE-LLCKMTNIKSILLKETSIGEFPFSFQNLSELRHLTISGDNL----- 737

Query: 699 IIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCK 736
              +++ LR + L++    +    +P  L+      CK
Sbjct: 738 ---KINLLRILRLDECKCFEEDRGIPSNLEKFSGFQCK 772


>gi|224089412|ref|XP_002335049.1| predicted protein [Populus trichocarpa]
 gi|222832778|gb|EEE71255.1| predicted protein [Populus trichocarpa]
          Length = 679

 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 227/746 (30%), Positives = 350/746 (46%), Gaps = 164/746 (21%)

Query: 324  GTDAIEGIFLDLSKI-KGINLDPRAFTNMSNLRLFKFYVPKFYEIEK--LPSMSTEEQLS 380
            GT+ IEGI LD+SK+ + I+L   AF  M  LR   FY   + + +K  LP         
Sbjct: 1    GTEEIEGISLDMSKLSRQIHLKSDAFEMMDGLRFLNFYGRPYSQDDKMHLP--------- 51

Query: 381  YSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKAC- 439
                  P GL+YLP KLRYL WD +P ++LP  F+ ++LVEL+LR SK+ + W G K   
Sbjct: 52   ------PTGLEYLPNKLRYLRWDGFPSKSLPLAFRAEHLVELHLRESKLVKLWTGVKDVG 105

Query: 440  --------------------------------------VPSSIQNFKYLSALSFKGCQSL 461
                                                  VPSS+Q    L  ++ + C +L
Sbjct: 106  NLRTIDLSKSSYLTELPDLSMAKNLVSLRLKDCPSLTEVPSSLQYLDKLEYINLRCCYNL 165

Query: 462  RSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLD 521
            RSFP  L+      ++   C++L   P IS  +  L L  ++I+EVP SI     L+VLD
Sbjct: 166  RSFPM-LYSKVLRKLSIYQCLDLTTCPTISQNMKSLRLWGTSIKEVPQSIT--GKLKVLD 222

Query: 522  LRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS 581
            L GC ++ +                        FPE+   +E L   +   T I E+PSS
Sbjct: 223  LWGCSKMTK------------------------FPEVSGDIEEL---WLSETAIQEVPSS 255

Query: 582  FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
             + L  L  L +  CSKL++LP+    +E L Y+  + + I +LPSS+     LR LD S
Sbjct: 256  IQFLTRLRELEMNGCSKLESLPEITVPMESLEYLGLSETGIKELPSSIQSLTRLRDLDMS 315

Query: 642  HCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ-EIAYLSSLEILYLSGNNFESLPAII 700
             C  LES P    + + ++  L++S   ++EIP     +++SL+IL L G   + LP+ I
Sbjct: 316  GCSKLESLPE-ITVPMESLVELNLSKTGIKEIPSISFKHMTSLKILKLDGTPLKELPSSI 374

Query: 701  KQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM--LQSLPVL---PFCLESLDLTG 755
            + +++L+ + +   + L+S PE+ + ++ L  ++     ++ LP+      CL+ L L G
Sbjct: 375  QFLTRLQSLDMSGCSKLESFPEITVPMESLAELNLSKTGIKELPLSIKDMVCLKKLTLEG 434

Query: 756  CNMLRSLPELPL------CLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILL 809
                  + ELPL      CL+ L L     +++LPELP  L+ L  R+C+ L+++  I+ 
Sbjct: 435  T----PIKELPLSIKDMVCLEELTLHGTP-IKALPELPPSLRYLRTRDCSSLETVTSII- 488

Query: 810  CLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRH 869
                                     ++    + ++FTNC K++ K         L+   H
Sbjct: 489  -------------------------NIGRLQLRWDFTNCFKVDQKP--------LIEAMH 515

Query: 870  MAIASLRLGYEMAINEKLSELRGSLI--VLPGSEIPDWFSNQSSGSSICIQLPPHSSCRN 927
            + I S   G E+         RG +I  VLPGSEIP+WF ++  GSS+ IQLP  S+C  
Sbjct: 516  LKIQS---GEEIP--------RGGIIEMVLPGSEIPEWFGDKGVGSSLTIQLP--SNCHQ 562

Query: 928  LIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRV 987
            L G AFC V        D   YF V  ++       S  + V + YN        DSD +
Sbjct: 563  LKGIAFCLVFLLPLPSRDL--YFDVHVKYKNGEHFASRERQV-ISYNL----GTCDSDHM 615

Query: 988  ILGFKPCLNVGFPDGYHHTIATFKFF 1013
            IL ++  L    P+ Y + + TFKF+
Sbjct: 616  ILQYR--LVNQLPENYGNEV-TFKFY 638


>gi|334182655|ref|NP_173203.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332191491|gb|AEE29612.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1049

 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 243/858 (28%), Positives = 375/858 (43%), Gaps = 143/858 (16%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG-GLEHLQKQML 62
           S+ V +VGIWGMGGIGKT++ K ++DQ S +F   CF+ +++  S+  G  L+HLQK++L
Sbjct: 202 SNEVLLVGIWGMGGIGKTSIVKCLYDQLSPKFPAHCFIENIKSVSKDNGHDLKHLQKELL 261

Query: 63  STTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
           S+ L + + +          K+R+   K+ +VLD V++V Q+  L  E + FG GSRI++
Sbjct: 262 SSILCDDIRLWSVEAGCQEIKKRLGNQKVFLVLDGVDKVAQVHALAKEKNWFGPGSRIII 321

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVSYTK 180
           TTRD  +L     E   +Y V  L+ ++A + F   AF+    P E  +  S        
Sbjct: 322 TTRDMGLLNTCGVE--VVYEVKCLDDKDALQMFKQIAFEGGLPPCEGFDQLSIRASKLAH 379

Query: 181 GNPLVLEVLGSSLCLKRKS--HWGKVLHDLNRICESEI-HDIYDILKISFNKLTPRVKSI 237
           G P  ++     L  +  S   W + L  L    ES +  +I +ILKIS+  L    +++
Sbjct: 380 GLPSAIQAYALFLRGRTASPEEWEEALGAL----ESSLDENIMEILKISYEGLPKPHQNV 435

Query: 238 FLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQ 293
           FL + C F G+    + S+L       S  + +L +KSL+ IS N  + MH ++++MGR+
Sbjct: 436 FLHVVCLFNGDTLQRITSLLHGPIPQSSLWIRVLAEKSLIKISTNGSVIMHKLVEQMGRE 495

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGI-NLDPRAFTNMS 352
           I+R +       R  L DP EI   L    G +  E + L    +  + +++      M 
Sbjct: 496 IIRDDMSL---ARKFLRDPMEIRVALAFRDGGEQTECMCLHTCDMTCVLSMEASVVGRMH 552

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NL+  K Y    Y                S +QL     +LP+ LR  HWD +PLR LPS
Sbjct: 553 NLKFLKVYKHVDYR--------------ESNLQLIPDQPFLPRSLRLFHWDAFPLRALPS 598

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
              P  LVELNLR S +E  W G            K L  L   G + L+  P       
Sbjct: 599 GSDPCFLVELNLRHSDLETLWSGTPM--------LKSLKRLDVTGSKHLKQLPDLSSITS 650

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
              +    C  L   P+  GK       +S ++++            L  RG +      
Sbjct: 651 LEELLLEQCTRLEGIPECIGK-------RSTLKKLK-----------LSYRGGR------ 686

Query: 533 TSFCKLRSLVTLILLGCLNLEH----FPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
                 RS +   L      +H    FP+   KM+ L  I        E  S F      
Sbjct: 687 ------RSALRFFLRKSTRQQHIGLEFPDAKVKMDALINISIGGDITFEFRSKFR----- 735

Query: 589 EVLFVEDCSKLDNLPDNIGSLEYLYY------ILAAASAISQLP---SSVALSNMLRSLD 639
                             G  EY+ +       + +A ++ Q P   S     N LR + 
Sbjct: 736 ------------------GYAEYVSFNSEQQIPIISAMSLQQAPWVISECNRFNSLRIMR 777

Query: 640 SSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAI 699
            SH +  ESF          +  L + +  +R+IP  I +L  LE L LSGN+FE+LP  
Sbjct: 778 FSHKENGESFSFDVFPDFPDLKELKLVNLNIRKIPSGICHLDLLEKLDLSGNDFENLPEA 837

Query: 700 IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP--------FCLESL 751
           +  +S+L+ + L++   LQ LP+L   ++ L L +C+ L+SL  L         +CL  L
Sbjct: 838 MSSLSRLKTLWLQNCFKLQELPKLTQ-VQTLTLTNCRNLRSLAKLSNTSQDEGRYCLLEL 896

Query: 752 DLTGCNMLRSLPE--------------------LPLCLQYLN------LEDCNMLRSLPE 785
            L  C  + SL +                    LP  ++ L       L +C  L+S+ +
Sbjct: 897 CLENCKSVESLSDQLSHFTKLTCLDLSNHDFETLPSSIRDLTSLVTLCLNNCKKLKSVEK 956

Query: 786 LPLCLQLLTVRNCNRLQS 803
           LPL LQ L    C+ L++
Sbjct: 957 LPLSLQFLDAHGCDSLEA 974


>gi|12324938|gb|AAG52417.1|AC011622_5 putative disease resistance protein; 23468-19973 [Arabidopsis
           thaliana]
          Length = 1063

 Score =  250 bits (638), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 219/731 (29%), Positives = 349/731 (47%), Gaps = 115/731 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +D+ D   IVGI+G  GIGKTT+A+A+    S  F+ +CF+ ++RG+  ++     L+ Q
Sbjct: 231 LDNDDEAMIVGIYGPAGIGKTTIARALHSLLSDRFQLTCFMENLRGSYNSSLDEYGLKLQ 290

Query: 61  MLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +    LS+ L   G  + + +  +  +   K+LI+LDDV+++ QL+ L  E   FG GSR
Sbjct: 291 LQEQLLSKILNQTGMRVYNLSAIQGMLCDQKVLIILDDVDDLKQLEALANETKWFGPGSR 350

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +VVTT ++ +L++   + K  Y V+    +EA + FC + FK++   +     S  V+  
Sbjct: 351 VVVTTENQELLKQ-HDDIKNTYYVDFPTQKEARQIFCRYGFKQSTPQDGFENLSERVIKL 409

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
               PL L V+G  L  K +  W  +LH L    +S   +I  +L++ ++ L  + + +F
Sbjct: 410 CSKLPLGLSVMGLYLRKKTEDDWEDILHRLESSFDSVDRNIERVLRVGYDGLHEKDQLLF 469

Query: 239 LDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVS-ISGNFLNMHDILQEMGRQI 294
           L IA FF  +D D V ++L D+  +V   L  L  KSL+   SG  + MH +LQ++GR+ 
Sbjct: 470 LLIAFFFNYKDDDHVKAMLADNNLNVRLGLKTLEYKSLIQRSSGGNIVMHKLLQQVGREA 529

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSN 353
           V+++   EP KR  L D  EI  VL+ + G   + GI  ++S I  G+++  +AF NM N
Sbjct: 530 VQRQ---EPWKRQILIDAHEICNVLETDSGCANVMGISFNVSTIPNGVHISAKAFQNMRN 586

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LR    Y              T   ++  +V +P+ +D+ P +LR LHW+ YP ++LPS 
Sbjct: 587 LRFLSIY-------------ETRRDVNL-RVNVPDDMDF-PHRLRSLHWEVYPGKSLPST 631

Query: 414 FKPKNLVELNLRCSKVEQPWEGEK----------------------------------AC 439
           F+P+ LVELNL+ +K+E+ WEG +                                   C
Sbjct: 632 FRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGC 691

Query: 440 -----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
                +PSS+ N   L  L    C  L+  P++ +     ++    C  L +FP IS  +
Sbjct: 692 WSLVEIPSSVGNLHKLEELEMNLCLQLQVVPTHFNLASLRSLRMLGCWELRKFPGISTNI 751

Query: 495 TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
           T L +G + +EE+  SI   + LE L + G      I+ +F      VTLI         
Sbjct: 752 TSLVIGDAMLEEMLESIRLWSCLETLVVYGSV----ITHNFWA----VTLI--------- 794

Query: 555 FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
                EKM          T I  +P   ++LP L+ L++  C KL +LP+  GSL  L  
Sbjct: 795 -----EKMG---------TDIERIPDCIKDLPALKSLYIGGCPKLFSLPELPGSLRRLTV 840

Query: 615 ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP 674
               +      P    + +              SFP  F LG  A  ++       ++  
Sbjct: 841 ETCESLKTVSFPIDSPIVSF-------------SFPNCFELGEEARRVI------TQKAG 881

Query: 675 QEIAYLSSLEI 685
           Q IAYL   EI
Sbjct: 882 QMIAYLPGREI 892



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 143/364 (39%), Gaps = 104/364 (28%)

Query: 442 SSIQNFKYLSALSFKGCQSLRSFP-------SNLHFVCPVTINFSYCVNLIEFPQISGK- 493
           S+I N  ++SA +F+  ++LR           NL    P  ++F + +  + +    GK 
Sbjct: 568 STIPNGVHISAKAFQNMRNLRFLSIYETRRDVNLRVNVPDDMDFPHRLRSLHWEVYPGKS 627

Query: 494 ---------VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
                    +  L L  + +E++    + LT+L  L+L G  RLK +        +L  L
Sbjct: 628 LPSTFRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELP-DLSSATNLKRL 686

Query: 545 ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
            L GC +L                        E+PSS  NL  LE L +  C +L  +P 
Sbjct: 687 DLTGCWSL-----------------------VEIPSSVGNLHKLEELEMNLCLQLQVVPT 723

Query: 605 NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSA-MGLL 663
                   ++ LA+                LRSL    C  L  FP     G+S  +  L
Sbjct: 724 --------HFNLAS----------------LRSLRMLGCWELRKFP-----GISTNITSL 754

Query: 664 HISDYAVREIPQEIAYLSSLEILYLSG----NNFESLPAIIKQMSQLRFIHLEDFNMLQS 719
            I D  + E+ + I   S LE L + G    +NF ++  I K              M   
Sbjct: 755 VIGDAMLEEMLESIRLWSCLETLVVYGSVITHNFWAVTLIEK--------------MGTD 800

Query: 720 LPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM 779
           +  +P C+K            LP L    +SL + GC  L SLPELP  L+ L +E C  
Sbjct: 801 IERIPDCIK-----------DLPAL----KSLYIGGCPKLFSLPELPGSLRRLTVETCES 845

Query: 780 LRSL 783
           L+++
Sbjct: 846 LKTV 849


>gi|20466558|gb|AAM20596.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 992

 Score =  249 bits (637), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 219/731 (29%), Positives = 349/731 (47%), Gaps = 115/731 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +D+ D   IVGI+G  GIGKTT+A+A+    S  F+ +CF+ ++RG+  ++     L+ Q
Sbjct: 160 LDNDDEAMIVGIYGPAGIGKTTIARALHSLLSDRFQLTCFMENLRGSYNSSLDEYGLKLQ 219

Query: 61  MLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +    LS+ L   G  + + +  +  +   K+LI+LDDV+++ QL+ L  E   FG GSR
Sbjct: 220 LQEQLLSKILNQTGMRVYNLSAIQGMLCDQKVLIILDDVDDLKQLEALANETKWFGPGSR 279

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +VVTT ++ +L++   + K  Y V+    +EA + FC + FK++   +     S  V+  
Sbjct: 280 VVVTTENQELLKQ-HDDIKNTYYVDFPTQKEARQIFCRYGFKQSTPQDGFENLSERVIKL 338

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
               PL L V+G  L  K +  W  +LH L    +S   +I  +L++ ++ L  + + +F
Sbjct: 339 CSKLPLGLSVMGLYLRKKTEDDWEDILHRLESSFDSVDRNIERVLRVGYDGLHEKDQLLF 398

Query: 239 LDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVS-ISGNFLNMHDILQEMGRQI 294
           L IA FF  +D D V ++L D+  +V   L  L  KSL+   SG  + MH +LQ++GR+ 
Sbjct: 399 LLIAFFFNYKDDDHVKAMLADNNLNVRLGLKTLEYKSLIQRSSGGNIVMHKLLQQVGREA 458

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSN 353
           V+++   EP KR  L D  EI  VL+ + G   + GI  ++S I  G+++  +AF NM N
Sbjct: 459 VQRQ---EPWKRQILIDAHEICNVLETDSGCANVMGISFNVSTIPNGVHISAKAFQNMRN 515

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LR    Y              T   ++  +V +P+ +D+ P +LR LHW+ YP ++LPS 
Sbjct: 516 LRFLSIY-------------ETRRDVNL-RVNVPDDMDF-PHRLRSLHWEVYPGKSLPST 560

Query: 414 FKPKNLVELNLRCSKVEQPWEGEK----------------------------------AC 439
           F+P+ LVELNL+ +K+E+ WEG +                                   C
Sbjct: 561 FRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGC 620

Query: 440 -----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
                +PSS+ N   L  L    C  L+  P++ +     ++    C  L +FP IS  +
Sbjct: 621 WSLVEIPSSVGNLHKLEELEMNLCLQLQVVPTHFNLASLRSLRMLGCWELRKFPGISTNI 680

Query: 495 TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
           T L +G + +EE+  SI   + LE L + G      I+ +F      VTLI         
Sbjct: 681 TSLVIGDAMLEEMLESIRLWSCLETLVVYGSV----ITHNFWA----VTLI--------- 723

Query: 555 FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
                EKM          T I  +P   ++LP L+ L++  C KL +LP+  GSL  L  
Sbjct: 724 -----EKMG---------TDIERIPDCIKDLPALKSLYIGGCPKLFSLPELPGSLRRLTV 769

Query: 615 ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP 674
               +      P    + +              SFP  F LG  A  ++       ++  
Sbjct: 770 ETCESLKTVSFPIDSPIVSF-------------SFPNCFELGEEARRVI------TQKAG 810

Query: 675 QEIAYLSSLEI 685
           Q IAYL   EI
Sbjct: 811 QMIAYLPGREI 821



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 143/364 (39%), Gaps = 104/364 (28%)

Query: 442 SSIQNFKYLSALSFKGCQSLRSFP-------SNLHFVCPVTINFSYCVNLIEFPQISGK- 493
           S+I N  ++SA +F+  ++LR           NL    P  ++F + +  + +    GK 
Sbjct: 497 STIPNGVHISAKAFQNMRNLRFLSIYETRRDVNLRVNVPDDMDFPHRLRSLHWEVYPGKS 556

Query: 494 ---------VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
                    +  L L  + +E++    + LT+L  L+L G  RLK +        +L  L
Sbjct: 557 LPSTFRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELP-DLSSATNLKRL 615

Query: 545 ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
            L GC +L                        E+PSS  NL  LE L +  C +L  +P 
Sbjct: 616 DLTGCWSL-----------------------VEIPSSVGNLHKLEELEMNLCLQLQVVP- 651

Query: 605 NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSA-MGLL 663
                   ++ LA+                LRSL    C  L  FP     G+S  +  L
Sbjct: 652 -------THFNLAS----------------LRSLRMLGCWELRKFP-----GISTNITSL 683

Query: 664 HISDYAVREIPQEIAYLSSLEILYLSG----NNFESLPAIIKQMSQLRFIHLEDFNMLQS 719
            I D  + E+ + I   S LE L + G    +NF ++  I K              M   
Sbjct: 684 VIGDAMLEEMLESIRLWSCLETLVVYGSVITHNFWAVTLIEK--------------MGTD 729

Query: 720 LPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM 779
           +  +P C+K            LP L    +SL + GC  L SLPELP  L+ L +E C  
Sbjct: 730 IERIPDCIK-----------DLPAL----KSLYIGGCPKLFSLPELPGSLRRLTVETCES 774

Query: 780 LRSL 783
           L+++
Sbjct: 775 LKTV 778


>gi|22330404|ref|NP_176561.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196018|gb|AEE34139.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 992

 Score =  249 bits (637), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 219/731 (29%), Positives = 349/731 (47%), Gaps = 115/731 (15%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +D+ D   IVGI+G  GIGKTT+A+A+    S  F+ +CF+ ++RG+  ++     L+ Q
Sbjct: 160 LDNDDEAMIVGIYGPAGIGKTTIARALHSLLSDRFQLTCFMENLRGSYNSSLDEYGLKLQ 219

Query: 61  MLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +    LS+ L   G  + + +  +  +   K+LI+LDDV+++ QL+ L  E   FG GSR
Sbjct: 220 LQEQLLSKILNQTGMRVYNLSAIQGMLCDQKVLIILDDVDDLKQLEALANETKWFGPGSR 279

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +VVTT ++ +L++   + K  Y V+    +EA + FC + FK++   +     S  V+  
Sbjct: 280 VVVTTENQELLKQ-HDDIKNTYYVDFPTQKEARQIFCRYGFKQSTPQDGFENLSERVIKL 338

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
               PL L V+G  L  K +  W  +LH L    +S   +I  +L++ ++ L  + + +F
Sbjct: 339 CSKLPLGLSVMGLYLRKKTEDDWEDILHRLESSFDSVDRNIERVLRVGYDGLHEKDQLLF 398

Query: 239 LDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVS-ISGNFLNMHDILQEMGRQI 294
           L IA FF  +D D V ++L D+  +V   L  L  KSL+   SG  + MH +LQ++GR+ 
Sbjct: 399 LLIAFFFNYKDDDHVKAMLADNNLNVRLGLKTLEYKSLIQRSSGGNIVMHKLLQQVGREA 458

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSN 353
           V+++   EP KR  L D  EI  VL+ + G   + GI  ++S I  G+++  +AF NM N
Sbjct: 459 VQRQ---EPWKRQILIDAHEICNVLETDSGCANVMGISFNVSTIPNGVHISAKAFQNMRN 515

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LR    Y              T   ++  +V +P+ +D+ P +LR LHW+ YP ++LPS 
Sbjct: 516 LRFLSIY-------------ETRRDVNL-RVNVPDDMDF-PHRLRSLHWEVYPGKSLPST 560

Query: 414 FKPKNLVELNLRCSKVEQPWEGEK----------------------------------AC 439
           F+P+ LVELNL+ +K+E+ WEG +                                   C
Sbjct: 561 FRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGC 620

Query: 440 -----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV 494
                +PSS+ N   L  L    C  L+  P++ +     ++    C  L +FP IS  +
Sbjct: 621 WSLVEIPSSVGNLHKLEELEMNLCLQLQVVPTHFNLASLRSLRMLGCWELRKFPGISTNI 680

Query: 495 TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH 554
           T L +G + +EE+  SI   + LE L + G      I+ +F      VTLI         
Sbjct: 681 TSLVIGDAMLEEMLESIRLWSCLETLVVYGSV----ITHNFWA----VTLI--------- 723

Query: 555 FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
                EKM          T I  +P   ++LP L+ L++  C KL +LP+  GSL  L  
Sbjct: 724 -----EKMG---------TDIERIPDCIKDLPALKSLYIGGCPKLFSLPELPGSLRRLTV 769

Query: 615 ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP 674
               +      P    + +              SFP  F LG  A  ++       ++  
Sbjct: 770 ETCESLKTVSFPIDSPIVSF-------------SFPNCFELGEEARRVI------TQKAG 810

Query: 675 QEIAYLSSLEI 685
           Q IAYL   EI
Sbjct: 811 QMIAYLPGREI 821



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 143/364 (39%), Gaps = 104/364 (28%)

Query: 442 SSIQNFKYLSALSFKGCQSLRSFP-------SNLHFVCPVTINFSYCVNLIEFPQISGK- 493
           S+I N  ++SA +F+  ++LR           NL    P  ++F + +  + +    GK 
Sbjct: 497 STIPNGVHISAKAFQNMRNLRFLSIYETRRDVNLRVNVPDDMDFPHRLRSLHWEVYPGKS 556

Query: 494 ---------VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
                    +  L L  + +E++    + LT+L  L+L G  RLK +        +L  L
Sbjct: 557 LPSTFRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELP-DLSSATNLKRL 615

Query: 545 ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
            L GC +L                        E+PSS  NL  LE L +  C +L  +P 
Sbjct: 616 DLTGCWSL-----------------------VEIPSSVGNLHKLEELEMNLCLQLQVVP- 651

Query: 605 NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSA-MGLL 663
                   ++ LA+                LRSL    C  L  FP     G+S  +  L
Sbjct: 652 -------THFNLAS----------------LRSLRMLGCWELRKFP-----GISTNITSL 683

Query: 664 HISDYAVREIPQEIAYLSSLEILYLSG----NNFESLPAIIKQMSQLRFIHLEDFNMLQS 719
            I D  + E+ + I   S LE L + G    +NF ++  I K              M   
Sbjct: 684 VIGDAMLEEMLESIRLWSCLETLVVYGSVITHNFWAVTLIEK--------------MGTD 729

Query: 720 LPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNM 779
           +  +P C+K            LP L    +SL + GC  L SLPELP  L+ L +E C  
Sbjct: 730 IERIPDCIK-----------DLPAL----KSLYIGGCPKLFSLPELPGSLRRLTVETCES 774

Query: 780 LRSL 783
           L+++
Sbjct: 775 LKTV 778


>gi|297800100|ref|XP_002867934.1| hypothetical protein ARALYDRAFT_354804 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313770|gb|EFH44193.1| hypothetical protein ARALYDRAFT_354804 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 686

 Score =  249 bits (637), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 152/401 (37%), Positives = 217/401 (54%), Gaps = 42/401 (10%)

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT 231
           S   V Y+KG+P  L++LGS LC + K +W + L    R  + ++ ++   L +S+ +L 
Sbjct: 4   SNKFVDYSKGHPFALKLLGSDLCQRDKLYWIRKLERPQRRPDGKVQEV---LHMSYEELC 60

Query: 232 PRVKSIFLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQ 288
              KSIFLD+ACFF  E  D V+ IL       S+V++ LIDK LV++S N L MHD+L 
Sbjct: 61  LEEKSIFLDVACFFRSEKLDLVSRILSTYHIDASNVINDLIDKCLVTVSDNRLEMHDLLL 120

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
            M ++I  + S KE GKR RLWD +EI RV KH  GT  I  IFLD+S ++ + L    F
Sbjct: 121 TMEKEIGYESSIKEAGKRGRLWDQEEICRVFKHKTGTAKIRDIFLDMSNVESMKLSADIF 180

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
           T M +L+  KFY           S  ++   +  + + P GLD  P +L YLHW  YPL 
Sbjct: 181 TGMLSLKFLKFY----------NSHCSKWCKNDCRFRFPGGLDCFPDELVYLHWQGYPLE 230

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEK------------ACVP----SSIQNFKYLSA 452
            LP NF PK L++L+LR S ++Q WE EK             C      SSIQ    L +
Sbjct: 231 YLPLNFNPKKLIDLSLRYSSIKQLWEYEKNTGELRSSLNLECCTSLAKFSSIQQMDSLVS 290

Query: 453 LSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIE 512
           L+ + C +L+  P +++      +  S C  L +FP IS  +  LYL  ++++ VP SIE
Sbjct: 291 LNLRDCINLKRLPKSINLKFLKVLVLSGCSKLKKFPTISENIESLYLDGTSVKRVPESIE 350

Query: 513 CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
            L +L VL+L+ C          C+L  L  L   GC++LE
Sbjct: 351 SLRNLAVLNLKNC----------CRLMRLQYLDAHGCISLE 381



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 156/351 (44%), Gaps = 71/351 (20%)

Query: 730  LHLIDCKMLQSLPV---LPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPEL 786
            L+L DC  L+ LP    L F L+ L L+GC+ L+  P +   ++ L L D   ++ +PE 
Sbjct: 291  LNLRDCINLKRLPKSINLKF-LKVLVLSGCSKLKKFPTISENIESLYL-DGTSVKRVPES 348

Query: 787  PLCLQ---LLTVRNCNRLQSLPEILLCLQELDAS---VLEKLSKHSPDLQWAPESLKSAA 840
               L+   +L ++NC RL  L       Q LDA     LE ++K    L  A ++  +  
Sbjct: 349  IESLRNLAVLNLKNCCRLMRL-------QYLDAHGCISLETVAKPMTLLVIAEKTHST-- 399

Query: 841  ICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELR--------- 891
              F FT+C KLN  A   I+A + L+ + +A      GY +  N K+  LR         
Sbjct: 400  --FVFTDCFKLNRDAQENIVAHTQLKSQILAN-----GY-LQRNHKVQYLRFYHFQELVL 451

Query: 892  GSL--IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRY 949
            G L  +  PG+++P WF +Q  GSS+   LPPH      IG + C V+  K  +    R+
Sbjct: 452  GPLAAVSFPGNDLPLWFRHQRMGSSMETHLPPHWCDDKFIGLSLCIVVSFKDYEDRTSRF 511

Query: 950  FYV-----------SFQFDLEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVG 998
              +           S  F   +   +E+         R +     SD V + +  C    
Sbjct: 512  SVICKCKFRNEDGNSISFTCNLGGWTESSASSSLEEPRRLT----SDHVFISYNNCF--- 564

Query: 999  FPDGYH------HTIATFKFF-----AERK--FYKIKRCGLCPVYANPSET 1036
            +    H      +T A+FKFF     A+RK  F ++ +CG+  +YA P E 
Sbjct: 565  YAKKSHELNRCCNTTASFKFFNTDGKAKRKPDFCEVVKCGMSYLYA-PDEN 614


>gi|357499581|ref|XP_003620079.1| Resistance protein [Medicago truncatula]
 gi|355495094|gb|AES76297.1| Resistance protein [Medicago truncatula]
          Length = 667

 Score =  249 bits (637), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 165/431 (38%), Positives = 245/431 (56%), Gaps = 41/431 (9%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S+  VQ++GI+G GG+GKTTLA+A+++  + +F+G CF+ +VR NS   G LEHLQ++
Sbjct: 219 LRSNGEVQMLGIYGTGGMGKTTLARAVYNSIADQFDGLCFLHNVRENSAKYG-LEHLQEK 277

Query: 61  MLS--TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS    L  KL      IP   K+R+ R K+L++LDDV+E+ QL+ L G LD FG GS+
Sbjct: 278 LLSKLVELDVKLGDVNEGIP-IIKQRLHRKKVLLILDDVHELKQLQVLAGRLDWFGLGSK 336

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TT++K++L+    E  + Y ++ L  +EA E     AFK N    + +      V+Y
Sbjct: 337 VIITTQEKKLLDGHGIE--RAYEIHKLNDKEALELLRWNAFKNNKVDTNFDDILHQAVTY 394

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEV+GS+L  K    W   L    R     I  I +ILK+SF+ L    K++F
Sbjct: 395 ASGLPLALEVVGSNLFGKNIREWKSALSQYER---RPIRKIQEILKVSFDALEEDEKNVF 451

Query: 239 LDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSIS---GNFL-NMHDILQEM 290
           LDIAC F+G +   + +IL     + ++    +L DKSL+ I    GN++  +H ++++M
Sbjct: 452 LDIACCFKGYELKELENILHAHYGNCMNYQIRVLHDKSLIKIYWYLGNYVVTLHALIEKM 511

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLD--LSKIKGINLDPRAF 348
           G++IV ++S KEPG+RSRLW  K+I  VL+ NKG+  IE I+L+  LS+ + I       
Sbjct: 512 GKEIVHEKSPKEPGRRSRLWFHKDIIHVLEENKGSSQIEIIYLEFPLSEEEVIEWKGDEL 571

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M NL+           I K  S S              G  YLP  LR L W  YP R
Sbjct: 572 KKMQNLKTL---------IVKNGSFS-------------KGPKYLPNSLRVLEWPKYPSR 609

Query: 409 TLPSNFKPKNL 419
            +PS+F PK L
Sbjct: 610 IIPSDFCPKKL 620


>gi|357493433|ref|XP_003617005.1| Disease resistance protein [Medicago truncatula]
 gi|355518340|gb|AES99963.1| Disease resistance protein [Medicago truncatula]
          Length = 1491

 Score =  249 bits (636), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 220/746 (29%), Positives = 353/746 (47%), Gaps = 95/746 (12%)

Query: 8   QIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLS 67
           +I+GIW MGG+GKTT+AK  F +   +++  CF          A   E+   ++LS  L 
Sbjct: 215 RILGIWSMGGMGKTTIAKVFFAKHFAQYDHVCF----------ANAKEYSLSRLLSELLK 264

Query: 68  EKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKR 127
           E++  +          R+R  K+LIVLD+V    Q   L  +     Q SR+++TT+DK+
Sbjct: 265 EEISASDVVKSTIHMRRLRSRKVLIVLDNVESSDQFDYLCRDYHDLTQDSRLIITTKDKQ 324

Query: 128 VLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLE 187
           +L   RG    IY V   E  ++ E FC  AF+ ++  E      +  ++Y  G PL L+
Sbjct: 325 LL---RGRVDWIYEVKHWEDPKSLELFCLEAFEPSNPREKYEHLLQKAITYAGGVPLALK 381

Query: 188 VLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEG 247
           +L   L  +    W      L++  +  +H +   L++S+++L    K IFLDIA FF G
Sbjct: 382 LLALHLRSREIEFWVSSFKKLDKYPDGRLHKV---LRVSYDELDALQKKIFLDIAFFFIG 438

Query: 248 EDKDFVASILD----DSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQESEKE 302
           E K+ V  ILD    +  S ++ +L DK+L+++S N  + MHD+LQ+MG  I+  +  ++
Sbjct: 439 EKKERVTKILDACGFEPNSGIV-VLKDKALITVSNNHTIQMHDLLQKMGSDIICNDCGED 497

Query: 303 PGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVP 362
           P   +RL        V++ NKG+ +IEGI LDLS+   + L    FT M  LR+ KF+ P
Sbjct: 498 PATHTRLSGTAAF-EVIEENKGSSSIEGIMLDLSQNNVLPLTSDTFTKMKALRILKFHAP 556

Query: 363 KFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVEL 422
                      S+ ++ + +   LP  L    KKLRY  W  YP  +LP  F  K LVE+
Sbjct: 557 -----------SSLQKCTITYPYLPKFLKLFSKKLRYFEWYGYPFESLPQPFHAKFLVEI 605

Query: 423 NLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
            +  S V+Q W+G            K L  L                      I+ S C 
Sbjct: 606 RMPHSNVKQLWQG-----------MKELGKLE--------------------GIDLSECK 634

Query: 483 NLIEFPQISGKVTRLYLGQSAIE---EVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
           +LI+ P  S   +  ++  S  E   ++P S+ C   L  L L  C ++  +      L 
Sbjct: 635 HLIKLPDFSKASSLKWVNLSGCESLVDLPPSVLCADMLVTLILHRCTKITSVRGE-KHLN 693

Query: 540 SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
            L  + + GC +L+ F      +E+L       T I  L  S  +L  L+ L + D  KL
Sbjct: 694 CLEKISVDGCKSLKIFAVSSNLIENLDL---SSTGIQTLDLSIGSLEKLKRLNL-DSLKL 749

Query: 600 DNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSA 659
           + LP+ + S+  +  +  + SA+      +    +L  L                 GL +
Sbjct: 750 NCLPEGLSSVTSISELKISGSAL------IVEKQLLEEL---------------FDGLQS 788

Query: 660 MGLLHISDYAVR-EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
           + +LH+ D+  + E+P  I  LS L+ L L G+N + LP  IK++ +L  + L +   L+
Sbjct: 789 LQILHMKDFINQFELPNNIHVLSKLKELNLDGSNMKRLPESIKKLEELEILSLVNCRELE 848

Query: 719 SLPELPLCLKYLHLIDCKMLQSLPVL 744
            +PELP  +  L+ ++C  L S+  L
Sbjct: 849 CIPELPPLVTLLNAVNCTSLVSVSNL 874


>gi|215261582|gb|ACJ64862.1| disease resistance protein RPP1-like protein R8 [Arabidopsis
           thaliana]
          Length = 1207

 Score =  249 bits (636), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 239/767 (31%), Positives = 367/767 (47%), Gaps = 111/767 (14%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG------NSETAGGLEHLQ 58
           D V+++GIWG  GIGKTT+A+ +F+Q S  F+ S  + ++RG        E +  L+ LQ
Sbjct: 287 DEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIIVNIRGIYPRPCFDEYSAQLQ-LQ 345

Query: 59  KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            QMLS  ++ K       I H    +ER+R  K+ +VLD+V+++GQL  L  E   FG G
Sbjct: 346 NQMLSQMINHK----DIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPG 401

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++TT D  VL K  G    +Y+V     +EAF+ FC  AF +    E  +  +R V+
Sbjct: 402 SRIIITTEDLGVL-KAHG-INHVYKVKYPSNDEAFQIFCMNAFGQKQPHEGFDEIAREVM 459

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           +     PL L+VLGS+L  K K  W + L    R+  S   +I  I++ S++ L    K 
Sbjct: 460 ALAGELPLGLKVLGSALRGKSKPEWERTLP---RLKTSLDGNIGSIIQFSYDGLCDEDKY 516

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS-----GNFLNMHDILQ 288
           +FL IAC F+ E    V  +L +   DV   L +L  KSL+SI      G+ +NMH +L+
Sbjct: 517 LFLYIACLFKDELSTKVEEVLANKFLDVKQGLHVLAQKSLISIDENSFYGDTINMHTLLR 576

Query: 289 EMGRQIVRQESEKEP-GKRSRLWDPKEISRVLKHNK-GTDAIEGIFLDLSKI-KGINLDP 345
           + GR+  R++       KR  L   ++I  VL  +   +    GI LDL K  + +N+  
Sbjct: 577 QFGRETSRKQFVYHGFTKRQLLVGERDICEVLSDDTIDSRRFIGIHLDLYKSEEELNISE 636

Query: 346 RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
           +    + +    +  +   ++ E+L            ++ L + + + P K+R L W +Y
Sbjct: 637 KVLERVHDFHFVR--IDASFQPERL------------QLALQDLICHSP-KIRSLKWYSY 681

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
               LPS F P+ LVEL++  SK+ + WEG K      ++N K+   +     + L+  P
Sbjct: 682 QNICLPSTFNPEFLVELHMSFSKLRKLWEGTK-----QLRNLKW---MDLSNSEDLKELP 733

Query: 466 SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
                      N S   NL E               S++ E+PSSIE LT L+ L L+ C
Sbjct: 734 -----------NLSTATNLEELK---------LRDCSSLVELPSSIEKLTSLQRLYLQRC 773

Query: 526 KRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL--EKMEHLKRIYSDRTPITELPSSFE 583
             L  +  SF     L  L L  C +LE  P  +    ++ L  I   R  + ELP + E
Sbjct: 774 SSLVELP-SFGNATKLEELYLENCSSLEKLPPSINANNLQQLSLINCSR--VVELP-AIE 829

Query: 584 NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSH 642
           N   L+VL + +CS L  LP +I S   L  + ++  S++ +LPSS+     L  LD S+
Sbjct: 830 NATNLQVLDLHNCSSLLELPPSIASATNLKKLDISGCSSLVKLPSSIGDMTNLDVLDLSN 889

Query: 643 CKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAI--- 699
           C  L                         E+P  I   S L +     +  +S P I   
Sbjct: 890 CSSLV------------------------ELPININLKSFLAVNLAGCSQLKSFPEISTK 925

Query: 700 -----IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
                 ++MS+LR + + + N L SLP+LP  L YL+  +CK L+ L
Sbjct: 926 IFTDCYQRMSRLRDLRINNCNNLVSLPQLPDSLAYLYADNCKSLERL 972


>gi|342365831|gb|AEL30364.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 874

 Score =  249 bits (635), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 241/762 (31%), Positives = 364/762 (47%), Gaps = 105/762 (13%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           + V+ + IWGMGGIGKTT+A+A+F+     FE SCF++DVR + E    + H+QKQ+L  
Sbjct: 23  NDVRYMVIWGMGGIGKTTIARAVFETIRSRFEVSCFLADVREHCEKKDTV-HIQKQLL-- 79

Query: 65  TLSEKLEVAGPNIPHFTKERVRRM--------KLLIVLDDVNEVGQLKRLIGELDQFGQG 116
              +++ ++   +  + K   RR+        K+L+VLDDVN   QL+ L GE D FG G
Sbjct: 80  ---DQMNISSYAV--YNKYDGRRIIQNSLCLKKVLLVLDDVNHEKQLEDLAGEKDWFGPG 134

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++TTRD  VL+    E  +IY+V GL   EA   FC  AFK+    E     S+ VV
Sbjct: 135 SRIIITTRDVEVLKG--PEVHEIYKVEGLVESEALNLFCLKAFKQQEPTEGFLDLSKEVV 192

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            Y+ G PL L+VLGS L  +++    K  H+ N      I      LKIS+  L    K 
Sbjct: 193 KYSGGLPLALKVLGSYLNGQKE----KSSHEDNY----NIFMGVSTLKISYEGLEDTEKD 244

Query: 237 IFLDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVS------ISGNFLNMHDIL 287
           IFLDIACFF+G  K  V  +L     ++++ LDILI++SLV+      +    L MHD+L
Sbjct: 245 IFLDIACFFKGRQKHHVTEMLKRCGYQAEIGLDILINRSLVTLEEVKILGMVTLGMHDLL 304

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGI------------FLDL 335
           +EMG+QIV QES  +  KRSRLW  +++  VL   K ++A   I            + + 
Sbjct: 305 EEMGKQIVIQESPNDASKRSRLWCYEDVDFVLTQKKESEATHSIVSKVYYCETEEEWREY 364

Query: 336 SKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPK 395
            +IK  N    +F+N+  L+L                      L    V  P   D +P 
Sbjct: 365 REIKE-NWRDLSFSNICQLKL----------------------LILDGVNAPILCD-IPC 400

Query: 396 KLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSF 455
            L+ LHW+  P+ TLP   +   LVE++L   K+ + W+G+K          K L  L+ 
Sbjct: 401 TLKVLHWEGCPMETLPFTDQCYELVEIDLSHGKIVELWDGKKV--------LKKLEHLNL 452

Query: 456 KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT 515
             C+ L+  P           + S   NL        K   L+ G   +  +  S+    
Sbjct: 453 YFCEKLKQTP-----------DLSGAPNL--------KTLNLH-GCKELNYINPSLAHHK 492

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
            L  L+L  C+ L+ +     ++ SL  L L  C +L   PE  E M+ L  +  ++T I
Sbjct: 493 RLVELNLGRCRSLETLGDKL-EISSLEKLNLYECRSLRRLPEFGECMKQLSILDLEKTGI 551

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNM 634
            ELP +   L G+  L +  C KL +LP  +G    L  + L+    +S +P +      
Sbjct: 552 EELPPTLGKLAGVSELDLTGCHKLTSLPFPLGCFVGLKKLKLSRFVELSCVPYTTHGLES 611

Query: 635 LRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA----VREIPQEIAYLSSLEILYLSG 690
           L + D S+         +     S   L    +Y+    V  +  ++ +L+SL  L L  
Sbjct: 612 LEAWDFSNSPIFVGLLCSLSRLTSLSSLKLHGEYSRSREVSTLYYDLGHLTSLTDLDLGY 671

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
           ++F  +P  I  + +L  + L     L+ LPELP  L+ L +
Sbjct: 672 SDFLRVPICIHALPRLTRLDLCYCYNLEVLPELPSSLRELQV 713


>gi|255562174|ref|XP_002522095.1| hypothetical protein RCOM_1382630 [Ricinus communis]
 gi|223538694|gb|EEF40295.1| hypothetical protein RCOM_1382630 [Ricinus communis]
          Length = 515

 Score =  248 bits (634), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 156/359 (43%), Positives = 216/359 (60%), Gaps = 24/359 (6%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V++VGIWGMGGIGKTT+A  +FDQ S +F   CF  DVR N E     + LQ+++L   L
Sbjct: 155 VRVVGIWGMGGIGKTTVAVKVFDQVSGQFTSRCFFGDVRENLEKFTP-DCLQRELLFQVL 213

Query: 67  SEKLEVAGPNIPHFTKERVRRM----KLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
            +++  AG  +P      +R+M    K+LIVLDDV+++ Q++ LIG+   +G  SRI++T
Sbjct: 214 GKEISNAG--MPIMLSSSIRKMLSRRKVLIVLDDVSDLKQIELLIGKHTSYGPRSRIIMT 271

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           +RDK++L+    E   IY V  L   EA   FC  AFK++   +     S   + Y +G 
Sbjct: 272 SRDKQLLQNAGAE---IYEVEELNGSEALLLFCLHAFKQDSPKKGYMALSERAIKYAQGV 328

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L+VLGS+L  +    W   L  L    + EI     +L+IS+++L    K IFLDIA
Sbjct: 329 PLALKVLGSNLYSRDVEEWEDELEKLKGASDEEIR---KVLRISYDELCENEKEIFLDIA 385

Query: 243 CFFEGEDKDFVASILDDSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           CF +G DKD   SILD   S + +  L+DKSL+SIS N L+MHD+L++M + I+ Q  EK
Sbjct: 386 CFLKGVDKDRAESILDVHGSRIGIRRLLDKSLISISNNELDMHDLLEQMAKDIICQ--EK 443

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY 360
           + GKRSRLW   +I     HN GT+AI+GI LD+S    + L P AF  M NLR  KFY
Sbjct: 444 QLGKRSRLWQATDI-----HN-GTEAIKGISLDMS--SDLELSPTAFQRMDNLRFLKFY 494


>gi|42566891|ref|NP_193420.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658418|gb|AEE83818.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1147

 Score =  248 bits (634), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 249/904 (27%), Positives = 416/904 (46%), Gaps = 147/904 (16%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQK 59
            ++S +   +VGIWG  GIGK+T+ +A+F Q S +F    F++      S+ +G     +K
Sbjct: 201  LESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWEK 260

Query: 60   QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            ++LS  L +K       I HF   ++R++  K+LI+LDDV+ +  LK L+G+ + FG GS
Sbjct: 261  ELLSEILGQK----DIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGS 316

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI+V T+DK++L+    E   +Y V       A +    +AF ++  P+D    +  V  
Sbjct: 317  RIIVITQDKQLLKAH--EIDLVYEVELPSQGLALKMISQYAFGKDSPPDDFKELAFEVAE 374

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                 PL L VLGSSL  + K  W K++  L    + +I +    L++ +++L  + + +
Sbjct: 375  LVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEET---LRVGYDRLNKKNREL 431

Query: 238  FLDIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVR 296
            F  IACFF G     V  +L+D     L +L DKSL+ I+ +  + MH++L+++GR+I R
Sbjct: 432  FKCIACFFNGFKVSNVKELLEDDVG--LTMLADKSLIRITPDGDIEMHNLLEKLGREIDR 489

Query: 297  QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLD----LSKIKGINLDPRAFTNMS 352
             +S+  P KR  L + ++I  V+    GT+ + GI +      S    + ++  +F  M 
Sbjct: 490  AKSKGNPAKRQFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVINEESFKGMR 549

Query: 353  NLRLFKFYVPKFYEIEKLPSMSTEEQLS-YSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NL        ++ EI     +    ++  +SK+ LP GL YLP KL+ L W+  PL++LP
Sbjct: 550  NL--------QYLEIGHWSEIGLWSEIGLWSKIDLPQGLVYLPLKLKLLKWNYCPLKSLP 601

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGE------KACVPSSIQNFK---------YLSALSFK 456
            S FK + LV L ++ SK+E+ WEG       K        N K          L  L+  
Sbjct: 602  STFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMDLGCSNNLKEIPDLSLAINLEELNLS 661

Query: 457  GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTD 516
             C+SL + PS++     +   +   V LI+   + G     YL         SS+E    
Sbjct: 662  KCESLVTLPSSIQNAIKLRTLYCSGVLLIDLKSLEGMCNLEYLSVDW-----SSMEGTQG 716

Query: 517  LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPIT 576
            L  L     ++LKR+   +C ++ L +          +F     K E+L  +  + + + 
Sbjct: 717  LIYLP----RKLKRLWWDYCPVKRLPS----------NF-----KAEYLVELRMENSDLE 757

Query: 577  ELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
            +L    + L  L+ +++     L  +PD   ++      L    ++  LPSS+  +  L 
Sbjct: 758  KLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQNATKLI 817

Query: 637  SLDSSHCKGLESFP-------------------RTF---LLGLSAMGLLH------ISD- 667
            +LD   CK LESFP                   R F    +G S   +L       + D 
Sbjct: 818  NLDMRDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSYFEILQDRNEIEVEDC 877

Query: 668  YAVREIPQEIAYLSS-------------LEILYLSGNNFESLPAIIKQMSQLRFIHLEDF 714
            +  + +P  + YL               L  L +SG   E L   I+ +  L+ + L + 
Sbjct: 878  FWNKNLPAGLDYLDCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKRMDLSES 937

Query: 715  NMLQSLPELPLC--LKYLHLIDCKMLQSLP---------------------VLPF----- 746
              L  +P+L     LK L+L  CK L +LP                     +LP      
Sbjct: 938  ENLTEIPDLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDVNLS 997

Query: 747  CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLT------VRNCNR 800
             L  LDL+GC+ LR+ P +   ++ L LE+     ++ E+P C++ LT      +  C R
Sbjct: 998  SLIILDLSGCSSLRTFPLISTRIECLYLENT----AIEEVPCCIEDLTRLSVLLMYCCQR 1053

Query: 801  LQSL 804
            L+++
Sbjct: 1054 LKNI 1057



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 88/204 (43%), Gaps = 49/204 (24%)

Query: 385  QLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA------ 438
             LP GLDYL             +R +P  F+P+ L  L++   K E+ WEG ++      
Sbjct: 882  NLPAGLDYL----------DCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKR 931

Query: 439  ---------------------------------CVPSSIQNFKYLSALSFKGCQSLRSFP 465
                                              +PS+I N   L  L  K C  L   P
Sbjct: 932  MDLSESENLTEIPDLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLP 991

Query: 466  SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
            ++++    + ++ S C +L  FP IS ++  LYL  +AIEEVP  IE LT L VL +  C
Sbjct: 992  TDVNLSSLIILDLSGCSSLRTFPLISTRIECLYLENTAIEEVPCCIEDLTRLSVLLMYCC 1051

Query: 526  KRLKRISTSFCKLRSLVTLILLGC 549
            +RLK IS +  +L SL+      C
Sbjct: 1052 QRLKNISPNIFRLTSLMVADFTDC 1075


>gi|357461481|ref|XP_003601022.1| TMV resistance protein N [Medicago truncatula]
 gi|355490070|gb|AES71273.1| TMV resistance protein N [Medicago truncatula]
          Length = 868

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 224/759 (29%), Positives = 357/759 (47%), Gaps = 122/759 (16%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG-GLEHLQKQ 60
           D S+ V ++GIWGMGG GKTT AKAI++Q + +F    F+ ++R   E    G+  LQ+Q
Sbjct: 70  DQSNKVCMIGIWGMGGSGKTTTAKAIYNQINRKFADRSFIENIREICEKDNTGIIRLQEQ 129

Query: 61  MLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS  L  K++         T  ++R+R   +L++LDDV++  Q+K L G    FG GS 
Sbjct: 130 LLSDVLKIKVKKIHSITSGTTMIEKRLRGKTVLVILDDVSKFEQIKALCGNRKWFGTGSV 189

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           ++VTTRD  +L+  +     +  +  ++ +E+ E F   AF+E    +     SR+VV+Y
Sbjct: 190 LIVTTRDVHLLKLLKVAH--VCTMKEMDEDESLELFSWHAFREPSPTKYFTELSRNVVAY 247

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSI 237
             G PL LE+LGS L  + K  W  VL  L RI   ++ +    L+IS++ L   + K I
Sbjct: 248 CGGLPLALEILGSYLYGRTKREWTSVLSKLERIPNDQVQEK---LRISYDGLKDDMEKDI 304

Query: 238 FLDIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSI-SGNFLNMHDILQEMGRQ 293
           FLDI  FF G+D+ +V  IL+     +D+ + +L+++SLV I   N L MHD+L++MGR+
Sbjct: 305 FLDICFFFIGKDRAYVTKILNGRGLYADIGITVLVERSLVKIEKNNKLGMHDLLRDMGRE 364

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IVRQ S K PGKRSRLW  +++  VL  N  T  +EG+   L +   +     +F  M  
Sbjct: 365 IVRQSSVKNPGKRSRLWFHEDVHDVLTKNMVTKTVEGLAFKLQRTDRVCFSTNSFKEMKK 424

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LRL                      L    V L    D    +LR++ W  +    +P +
Sbjct: 425 LRL----------------------LQLDCVNLIGDYDCFSNQLRWVKWQGFTFNNIPDD 462

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           F   NLV ++L+ S + Q W      + ++ + FK +     K C +L    S++H    
Sbjct: 463 FYQGNLVAMDLKHSNIRQVW------IETTPRLFKIM-----KDCPNL----SDIH---- 503

Query: 474 VTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
                                               SI  L  L +++L+ C  L  +  
Sbjct: 504 -----------------------------------QSIGNLNSLLLINLKDCTSLNSLPK 528

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS-----FENLPGL 588
              +L+SL TLIL GC  +E+  EI++ ME L  + +  T + E+P S       +LP +
Sbjct: 529 KIYQLKSLKTLILSGCSKIENLEEIVQ-MESLTTLIAKDTGVKEVPCSIMSPTMNSLPRV 587

Query: 589 EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAIS----QLPSSVALSNMLR-------- 636
              F      L ++  N+ ++ +L  ++ + S +     Q  S + L+  LR        
Sbjct: 588 ST-FGNMAFSLTSI--NVHNVGFLSPVIKSLSQLRTVWVQCRSKIQLTQELRRILGGQYD 644

Query: 637 ----SLDSSHCKGLESFP-RTFLLGLSAMGLLHIS-DYAVREIPQEIAYLSSLEILYLSG 690
                L++SH     +   R+ L+    MG  HI  D   + I QE    ++   L+L G
Sbjct: 645 ANFTKLETSHASQFSNHSLRSLLI---RMGSCHIVIDTLGKSISQE-PTTNNYSDLFLPG 700

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY 729
            N+ S  A   +    +F   ED +    +  + LC  Y
Sbjct: 701 GNYPSWLAYTGEGPSAQFQVPEDIDC--HMKGIILCTVY 737


>gi|357500591|ref|XP_003620584.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495599|gb|AES76802.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1392

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 225/726 (30%), Positives = 338/726 (46%), Gaps = 145/726 (19%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLS-EKLEVAGP-NI 77
           KTTLA  ++ Q  H F+ SCF+ DV        G    QKQ+L  TL  E  ++    + 
Sbjct: 230 KTTLAMNLYGQICHRFDASCFIDDVSKIFRLHDGPIDAQKQILHQTLGIEHHQICNHYSA 289

Query: 78  PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
               + R+ R K L++LD+V++V QL+R+    +  G GSRIV+ +RD+ +L+++  +  
Sbjct: 290 TDLIRNRLSREKTLLILDNVDQVEQLERIGVHREWLGAGSRIVIISRDEHILKEYGVD-- 347

Query: 138 KIYRVNGLEFEEAFEHFCNFAFK-ENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
            +Y+V  L + EA + FC  AFK E     +    +  ++ Y  G PL ++VLGS L  +
Sbjct: 348 VVYKVPLLNWAEAHKLFCRKAFKAEKIIMSNYKNLANEILRYANGLPLAIKVLGSYLFGR 407

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
             + W   L  L    ES  +D+ D+L++SF+ L    K IFLDIACF    ++ +V +I
Sbjct: 408 NVTEWKSTLASLR---ESPDNDVMDVLQLSFDGLKEMEKEIFLDIACFSTFRNEKYVKNI 464

Query: 257 LD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           L+     +D+ L +LI KSL+SIS + + MH +LQE+GR+IV+  S KEP K SRLW  K
Sbjct: 465 LNCCGFHADIGLSVLIAKSLISISNSRIIMHSLLQELGRKIVQNSSCKEPRKWSRLWSAK 524

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           +   V   N     ++ I LD  ++     D    + MSNLRL       +  I   PS 
Sbjct: 525 QFYNVKMENM-EKQVKAIVLDDEEV-----DVEQLSKMSNLRLLIIRYGMY--ISGSPSC 576

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
                              L  KLRY+ WD YP + LPS+F P  LVEL L  S + Q W
Sbjct: 577 -------------------LSNKLRYVEWDEYPSKYLPSSFHPNELVELILVKSNITQLW 617

Query: 434 EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
                      +N KYL         +LR+           +I     ++  EFP     
Sbjct: 618 -----------KNKKYLP--------NLRTLD------LSHSIELEKIIDFGEFP----- 647

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
                                 +LE L+L GC  L  +  S   LR+LV L L  C NL 
Sbjct: 648 ----------------------NLEWLNLEGCTNLVELDPSIGLLRNLVYLNLENCYNL- 684

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
                                   +P++   L  LE L +  CSK+ N P ++   +  +
Sbjct: 685 ----------------------VSIPNTIFGLGSLEDLNISCCSKVFNKPIHLEKNKKRH 722

Query: 614 YILAAASAI---------SQLPSSVALS------NMLRSLDSSHCKGLESFPRTFLLGLS 658
           YI  +AS           + LP   + S      ++L SL S HC               
Sbjct: 723 YITESASHSRSTSSVFEWTMLPHHSSFSAPTTHTSLLPSLRSLHC--------------- 767

Query: 659 AMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
            +  + IS   +R++P  I  L  LE L L GN+F +LP+ ++++S+L +++LE   +L+
Sbjct: 768 -LRNVDISFCYLRQVPGTIECLHWLERLNLGGNDFVTLPS-LRKLSKLVYLNLEHCRLLE 825

Query: 719 SLPELP 724
           SLP+LP
Sbjct: 826 SLPQLP 831



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 149/374 (39%), Gaps = 54/374 (14%)

Query: 572 RTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVA 630
           ++ IT+L  + + LP L  L +    +L+ + D  G    L ++ L   + + +L  S+ 
Sbjct: 610 KSNITQLWKNKKYLPNLRTLDLSHSIELEKIID-FGEFPNLEWLNLEGCTNLVELDPSIG 668

Query: 631 LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
           L   L  L+  +C  L S P T + GL ++  L+IS     ++  +  +L   +  +   
Sbjct: 669 LLRNLVYLNLENCYNLVSIPNT-IFGLGSLEDLNIS--CCSKVFNKPIHLEKNKKRHYIT 725

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLES 750
            +     +           H   F+   +   L   L+ LH               CL +
Sbjct: 726 ESASHSRSTSSVFEWTMLPHHSSFSAPTTHTSLLPSLRSLH---------------CLRN 770

Query: 751 LDLTGCNMLRSLPELPLCLQYL---NLEDCNMLRSLPELPLCLQL--LTVRNCNRLQSLP 805
           +D++ C  LR +P    CL +L   NL   N   +LP L    +L  L + +C  L+SLP
Sbjct: 771 VDISFC-YLRQVPGTIECLHWLERLNL-GGNDFVTLPSLRKLSKLVYLNLEHCRLLESLP 828

Query: 806 EILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLL 865
           +            L   +    D +     L +  + F   NC KL  +     +  S  
Sbjct: 829 Q------------LPSPTSIGRDHREKEYKLNTGLVIF---NCPKLGERERCSSMTFSW- 872

Query: 866 RIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP--HS 923
                        Y+ +    L E +   IV PG+EIP W +NQS G SI +   P  H 
Sbjct: 873 ------TTQFIQAYQQSYPTYLDEFQ---IVSPGNEIPSWINNQSMGDSIPVDQTPIMHD 923

Query: 924 SCRNLIGFAFCAVL 937
           +  N+IGF  C V 
Sbjct: 924 NNNNIIGFLCCVVF 937


>gi|21539521|gb|AAM53313.1| disease resistance RPP5-like protein [Arabidopsis thaliana]
          Length = 1147

 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 249/904 (27%), Positives = 416/904 (46%), Gaps = 147/904 (16%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQK 59
            ++S +   +VGIWG  GIGK+T+ +A+F Q S +F    F++      S+ +G     +K
Sbjct: 201  LESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWEK 260

Query: 60   QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            ++LS  L +K       I HF   ++R++  K+LI+LDDV+ +  LK L+G+ + FG GS
Sbjct: 261  ELLSEILGQK----DIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGS 316

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI+V T+DK++L+    E   +Y V       A +    +AF ++  P+D    +  V  
Sbjct: 317  RIIVITQDKQLLKAH--EIDLVYEVELPSQGLALKMISQYAFGKDSPPDDFKELAFEVAE 374

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                 PL L VLGSSL  + K  W K++  L    + +I +    L++ +++L  + + +
Sbjct: 375  LVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEET---LRVGYDRLNKKNREL 431

Query: 238  FLDIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVR 296
            F  IACFF G     V  +L+D     L +L DKSL+ I+ +  + MH++L+++GR+I R
Sbjct: 432  FKCIACFFNGFKVSNVKELLEDDVG--LTMLADKSLIRITPDGDIEMHNLLEKLGREIDR 489

Query: 297  QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLD----LSKIKGINLDPRAFTNMS 352
             +S+  P KR  L + ++I  V+    GT+ + GI +      S    + ++  +F  M 
Sbjct: 490  AKSKGNPAKRQFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVINEESFKGMR 549

Query: 353  NLRLFKFYVPKFYEIEKLPSMSTEEQLS-YSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NL        ++ EI     +    ++  +SK+ LP GL YLP KL+ L W+  PL++LP
Sbjct: 550  NL--------QYLEIGHWSEIGLWSEIGLWSKIDLPQGLVYLPLKLKLLKWNYCPLKSLP 601

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGE------KACVPSSIQNFK---------YLSALSFK 456
            S FK + LV L ++ SK+E+ WEG       K        N K          L  L+  
Sbjct: 602  STFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMDLGCSNNLKEIPDLSLAINLEELNLS 661

Query: 457  GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTD 516
             C+SL + PS++     +   +   V LI+   + G     YL         SS+E    
Sbjct: 662  KCESLVTLPSSIQNAIKLRTLYCSGVLLIDLKSLEGMCNLEYLSVDW-----SSMEDTQG 716

Query: 517  LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPIT 576
            L  L     ++LKR+   +C ++ L +          +F     K E+L  +  + + + 
Sbjct: 717  LIYLP----RKLKRLWWDYCPVKRLPS----------NF-----KAEYLVELRMENSDLE 757

Query: 577  ELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
            +L    + L  L+ +++     L  +PD   ++      L    ++  LPSS+  +  L 
Sbjct: 758  KLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQNATKLI 817

Query: 637  SLDSSHCKGLESFP-------------------RTF---LLGLSAMGLLH------ISD- 667
            +LD   CK LESFP                   R F    +G S   +L       + D 
Sbjct: 818  NLDMRDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSYFEILQDRNEIEVEDC 877

Query: 668  YAVREIPQEIAYLSS-------------LEILYLSGNNFESLPAIIKQMSQLRFIHLEDF 714
            +  + +P  + YL               L  L +SG   E L   I+ +  L+ + L + 
Sbjct: 878  FWNKNLPAGLDYLDCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKRMDLSES 937

Query: 715  NMLQSLPELPLC--LKYLHLIDCKMLQSLP---------------------VLPF----- 746
              L  +P+L     LK L+L  CK L +LP                     +LP      
Sbjct: 938  ENLTEIPDLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDVNLS 997

Query: 747  CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLT------VRNCNR 800
             L  LDL+GC+ LR+ P +   ++ L LE+     ++ E+P C++ LT      +  C R
Sbjct: 998  SLIILDLSGCSSLRTFPLISTRIECLYLENT----AIEEVPCCIEDLTRLSVLLMYCCQR 1053

Query: 801  LQSL 804
            L+++
Sbjct: 1054 LKNI 1057



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 88/204 (43%), Gaps = 49/204 (24%)

Query: 385  QLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA------ 438
             LP GLDYL             +R +P  F+P+ L  L++   K E+ WEG ++      
Sbjct: 882  NLPAGLDYL----------DCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKR 931

Query: 439  ---------------------------------CVPSSIQNFKYLSALSFKGCQSLRSFP 465
                                              +PS+I N   L  L  K C  L   P
Sbjct: 932  MDLSESENLTEIPDLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLP 991

Query: 466  SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
            ++++    + ++ S C +L  FP IS ++  LYL  +AIEEVP  IE LT L VL +  C
Sbjct: 992  TDVNLSSLIILDLSGCSSLRTFPLISTRIECLYLENTAIEEVPCCIEDLTRLSVLLMYCC 1051

Query: 526  KRLKRISTSFCKLRSLVTLILLGC 549
            +RLK IS +  +L SL+      C
Sbjct: 1052 QRLKNISPNIFRLTSLMVADFTDC 1075


>gi|357503303|ref|XP_003621940.1| TMV resistance protein N [Medicago truncatula]
 gi|355496955|gb|AES78158.1| TMV resistance protein N [Medicago truncatula]
          Length = 1093

 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 226/738 (30%), Positives = 353/738 (47%), Gaps = 83/738 (11%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEG-SCFVSDVRGNSE-TAGGLEHLQK 59
           D S    ++G+WGMGG GKTTLAKAI+++   EF+G + F+  +R   +    G+ HLQ+
Sbjct: 212 DESRKACMIGLWGMGGSGKTTLAKAIYNRIHREFQGKTSFIESIREVCDYNRKGIIHLQE 271

Query: 60  QMLSTTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           Q+LS  L  K ++    +  +  ++R++  K+LIVLDDV +  QLK L G    FG GS 
Sbjct: 272 QLLSDLLKTKDKIHSIAVGINKIEKRLQGQKVLIVLDDVTKSEQLKALGGNPKLFGSGSV 331

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVS 177
           +++TTRD+  L+       +++ +  ++  E+ E F   AF+++ CP +D    SR+VVS
Sbjct: 332 LIITTRDRSHLDSLSA---RVFTMIEMDKNESLELFSWHAFRQS-CPRKDFGKLSRNVVS 387

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KS 236
           Y KG PL LEVLGS L  + +  W   L  L +I  +E+     IL+IS++ L     K 
Sbjct: 388 YCKGLPLALEVLGSYLSKRTEQEWRSALSKLTKIPNNEV---LQILRISYDGLEDYTEKD 444

Query: 237 IFLDIACFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSIS-GNFLNMHDILQEMGR 292
           IFLDI CFF G+++  V  IL+     +D+ + +LI++SL+ +   N   MHD+L++MGR
Sbjct: 445 IFLDICCFFIGKNRVDVTEILNGCGLHADIGVSVLIERSLIKVDKNNKFQMHDLLRDMGR 504

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
            IV + S KEP K SRLW  +++  VL    GT  +EG+ L   +   I     AF  M 
Sbjct: 505 AIVSESSAKEPEKHSRLWCHEDVLDVLSKKTGTKTVEGLILKWQRTGRICFGTNAFQEME 564

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            LRL K                         V L      + K+LR++ W       +P+
Sbjct: 565 KLRLLKL----------------------DGVDLIGDYGLISKQLRWVDWQRSTFTFIPN 602

Query: 413 NFKPKNLVELNLRCSKVEQPWEGE---KACVPSSIQNFKYLSA------------LSFKG 457
           +F   NLV   L+ S V+Q W+     +      + + KYL +            L  K 
Sbjct: 603 DFDQANLVVFELKYSNVKQVWQDTKLLEKLKVLKLSHSKYLKSSPDFSKLPNLEKLVMKD 662

Query: 458 CQSLRSF-PSNLHFVCPVTINFSYCVNLIEFP----QISGKVTRLYLGQSAIEEVPSSIE 512
           CQSL +  PS       + IN   C+ L   P    Q+    T +  G S I+++   I 
Sbjct: 663 CQSLSNVHPSIGDLKNLLLINLKDCIILENLPREIYQLKSVKTLILTGCSTIDKLEEDIV 722

Query: 513 CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH--FPEILE-----KMEHL 565
            +  L  L   G   +K +  S  +LRS+V + + G   L H  FP ++       +  L
Sbjct: 723 QMESLTSLITTGTS-IKEVPYSILRLRSIVYISICGYEGLSHEVFPSLIRFWMSPTINSL 781

Query: 566 KRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQL 625
            RI     P   +P S  +L  LE     + + L  L   + S   L        ++ QL
Sbjct: 782 PRI----PPFGGMPLSLVSL-DLENNNNNNNNNLSCLVPKLNSFSELRSFRVQCQSMIQL 836

Query: 626 PSSVA--LSNM----LRSLDSSHCKGLESFP-RTFLLGLSAMGLLH-ISDYAVREIPQEI 677
              +   L ++       L++SH   +     R+ L+G   MG  H + +   + I QE+
Sbjct: 837 TRELRRFLDDLYDANFTELETSHTSQISVLSLRSLLIG---MGSYHTVINTLGKSISQEL 893

Query: 678 AYLSSLEILYLSGNNFES 695
               S++  +L G+N+ S
Sbjct: 894 RTNDSVD-YFLPGDNYPS 910


>gi|357499505|ref|XP_003620041.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355495056|gb|AES76259.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 861

 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 203/614 (33%), Positives = 293/614 (47%), Gaps = 91/614 (14%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S   V +VGI+G+GG+GK+TLAKAI++  + +FE SCF+ +V+  S  +  L++LQ+++L
Sbjct: 215 SDHGVHMVGIYGIGGLGKSTLAKAIYNFIADQFECSCFLENVK-ESSASNNLKNLQQELL 273

Query: 63  STTLSE--KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             TL    KL      IP   KER+   K+L++LDDV+++ QL  L G LD FG GSR++
Sbjct: 274 LKTLQLEIKLGSVSEGIPKI-KERLHGKKILLILDDVDKLDQLDALAGGLDWFGPGSRVI 332

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK +L+    E  K Y V  L   EA E     AFK    P       +  V Y  
Sbjct: 333 ITTRDKHLLDCHGIE--KTYAVEELNGTEALELLRWKAFKNEKVPSSYEDILKRAVVYAS 390

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL +EV+GS+L  K  +     L    RI      DI  IL++S++ L    +S+FLD
Sbjct: 391 GLPLAIEVVGSNLFGKSIAECESTLDKYGRIPHK---DIQKILRLSYDALEEEEQSVFLD 447

Query: 241 IACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSIS-----GNFLNMHDILQEMG 291
           IAC  +G   + V  IL      S    + +L+DKSL++IS     G  + +H++++ MG
Sbjct: 448 IACCIKGCRLEKVKQILHAHYGYSIESHIGVLVDKSLINISWCCFSGIKVTLHELIEVMG 507

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTN 350
           +++VRQES KEPG+RSRLW   +I  VLK N GT   E I ++L  ++  I+   +AF  
Sbjct: 508 KEVVRQESPKEPGERSRLWSQDDIVHVLKENTGTGKTEMICMNLHSMESVIDKKGKAFKK 567

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M+ L+                       L         GL YL   L+ L W+       
Sbjct: 568 MTRLK----------------------TLIIENGHCSKGLKYLRSSLKALKWEG------ 599

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
                          C                  + F+ ++ L    C+ L   P     
Sbjct: 600 ---------------CLSKSLS-------SSILSKKFQDMTILILDHCEYLTHIPDVSGL 637

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                ++F YC NLI                     + +SI  L  LE L   GC+ LKR
Sbjct: 638 SNLEKLSFEYCKNLIT--------------------IHNSIGHLNKLERLSAFGCRTLKR 677

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
                  L SL  L L  C +L+ FP++L KM ++ +I+   T I ELPSSF+NL  L+ 
Sbjct: 678 FPP--LGLASLKELKLSCCYSLKSFPKLLCKMTNIDKIWFWYTSIRELPSSFQNLSELDE 735

Query: 591 LFVEDCSKLDNLPD 604
           L V +     NL D
Sbjct: 736 LSVREFGIHINLYD 749



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 86/177 (48%), Gaps = 30/177 (16%)

Query: 588 LEVLFVEDCSKLDNLPDNIG-------SLEYLYYILAAASAISQLPSSVALSNMLRSLDS 640
           + +L ++ C  L ++PD  G       S EY   ++   ++I  L       N L  L +
Sbjct: 617 MTILILDHCEYLTHIPDVSGLSNLEKLSFEYCKNLITIHNSIGHL-------NKLERLSA 669

Query: 641 SHCKGLESFPRTFLLGLSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSGNNFESLPAI 699
             C+ L+ FP    LGL+++  L +S  Y+++  P+ +  +++++ ++    +   LP+ 
Sbjct: 670 FGCRTLKRFPP---LGLASLKELKLSCCYSLKSFPKLLCKMTNIDKIWFWYTSIRELPSS 726

Query: 700 IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGC 756
            + +S+L  + + +F +            +++L DCK L+ +  +P  LE +D  GC
Sbjct: 727 FQNLSELDELSVREFGI------------HINLYDCKSLEEIRGIPPNLEVVDAYGC 771


>gi|124361170|gb|ABN09142.1| TIR [Medicago truncatula]
          Length = 1054

 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 226/738 (30%), Positives = 353/738 (47%), Gaps = 83/738 (11%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEG-SCFVSDVRGNSE-TAGGLEHLQK 59
           D S    ++G+WGMGG GKTTLAKAI+++   EF+G + F+  +R   +    G+ HLQ+
Sbjct: 212 DESRKACMIGLWGMGGSGKTTLAKAIYNRIHREFQGKTSFIESIREVCDYNRKGIIHLQE 271

Query: 60  QMLSTTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           Q+LS  L  K ++    +  +  ++R++  K+LIVLDDV +  QLK L G    FG GS 
Sbjct: 272 QLLSDLLKTKDKIHSIAVGINKIEKRLQGQKVLIVLDDVTKSEQLKALGGNPKLFGSGSV 331

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVS 177
           +++TTRD+  L+       +++ +  ++  E+ E F   AF+++ CP +D    SR+VVS
Sbjct: 332 LIITTRDRSHLDSLSA---RVFTMIEMDKNESLELFSWHAFRQS-CPRKDFGKLSRNVVS 387

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KS 236
           Y KG PL LEVLGS L  + +  W   L  L +I  +E+     IL+IS++ L     K 
Sbjct: 388 YCKGLPLALEVLGSYLSKRTEQEWRSALSKLTKIPNNEV---LQILRISYDGLEDYTEKD 444

Query: 237 IFLDIACFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSIS-GNFLNMHDILQEMGR 292
           IFLDI CFF G+++  V  IL+     +D+ + +LI++SL+ +   N   MHD+L++MGR
Sbjct: 445 IFLDICCFFIGKNRVDVTEILNGCGLHADIGVSVLIERSLIKVDKNNKFQMHDLLRDMGR 504

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
            IV + S KEP K SRLW  +++  VL    GT  +EG+ L   +   I     AF  M 
Sbjct: 505 AIVSESSAKEPEKHSRLWCHEDVLDVLSKKTGTKTVEGLILKWQRTGRICFGTNAFQEME 564

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            LRL K                         V L      + K+LR++ W       +P+
Sbjct: 565 KLRLLKL----------------------DGVDLIGDYGLISKQLRWVDWQRSTFTFIPN 602

Query: 413 NFKPKNLVELNLRCSKVEQPWEGE---KACVPSSIQNFKYLSA------------LSFKG 457
           +F   NLV   L+ S V+Q W+     +      + + KYL +            L  K 
Sbjct: 603 DFDQANLVVFELKYSNVKQVWQDTKLLEKLKVLKLSHSKYLKSSPDFSKLPNLEKLVMKD 662

Query: 458 CQSLRSF-PSNLHFVCPVTINFSYCVNLIEFP----QISGKVTRLYLGQSAIEEVPSSIE 512
           CQSL +  PS       + IN   C+ L   P    Q+    T +  G S I+++   I 
Sbjct: 663 CQSLSNVHPSIGDLKNLLLINLKDCIILENLPREIYQLKSVKTLILTGCSTIDKLEEDIV 722

Query: 513 CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH--FPEILE-----KMEHL 565
            +  L  L   G   +K +  S  +LRS+V + + G   L H  FP ++       +  L
Sbjct: 723 QMESLTSLITTGTS-IKEVPYSILRLRSIVYISICGYEGLSHEVFPSLIRFWMSPTINSL 781

Query: 566 KRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQL 625
            RI     P   +P S  +L  LE     + + L  L   + S   L        ++ QL
Sbjct: 782 PRI----PPFGGMPLSLVSLD-LENNNNNNNNNLSCLVPKLNSFSELRSFRVQCQSMIQL 836

Query: 626 PSSVA--LSNM----LRSLDSSHCKGLESFP-RTFLLGLSAMGLLH-ISDYAVREIPQEI 677
              +   L ++       L++SH   +     R+ L+G   MG  H + +   + I QE+
Sbjct: 837 TRELRRFLDDLYDANFTELETSHTSQISVLSLRSLLIG---MGSYHTVINTLGKSISQEL 893

Query: 678 AYLSSLEILYLSGNNFES 695
               S++  +L G+N+ S
Sbjct: 894 RTNDSVD-YFLPGDNYPS 910


>gi|357499535|ref|XP_003620056.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355495071|gb|AES76274.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 1065

 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 231/751 (30%), Positives = 341/751 (45%), Gaps = 134/751 (17%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S   V +VGI+G+GG+GK+TLAKAI++  + +FE SCF+ +V+  S  +  L++LQ+++L
Sbjct: 215 SDHGVHMVGIYGIGGLGKSTLAKAIYNFIADQFECSCFLENVK-ESSASNNLKNLQQELL 273

Query: 63  STTLSE--KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             TL    KL      IP   KER+   K+L++LDDV+++ QL+ L G LD FG GSR++
Sbjct: 274 LKTLQLEIKLGSVSEGIPKI-KERLHGKKILLILDDVDKLDQLEALAGRLDWFGPGSRVI 332

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRDK +L+    E  K Y V  L   EA E     AFK    P       +  V Y  
Sbjct: 333 ITTRDKHLLDCHGIE--KTYAVEELNETEALELLRWKAFKNEKVPSSYEDILKRAVVYAS 390

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL +EV+GS+L  K  +     L    RI      DI  IL++S++ L    +S+FLD
Sbjct: 391 GLPLAIEVVGSNLFGKSIAECESTLDKYGRIPHK---DIQKILRLSYDALDEEEQSVFLD 447

Query: 241 IACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNF-----LNMHDILQEMG 291
           IAC  +G   + V  IL      S    L +L+DKSL+ IS  F     + +H++++ MG
Sbjct: 448 IACCIKGCRLEEVEQILHHHYGYSIKSHLRVLVDKSLIKISWCFFSGIKVTLHELIEVMG 507

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTN 350
           +++VRQES KEPG+RSRLW   +I  VL  N GT   E I ++L  ++  I+   +AF  
Sbjct: 508 KEVVRQESPKEPGERSRLWSQDDIVHVLTENTGTGKTEMICMNLHSMESVIDKKGKAFKK 567

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           M+ L+                       L         GL +LP  L+ L W+       
Sbjct: 568 MTRLK----------------------TLIIENGHCSKGLKHLPSSLKALKWEG------ 599

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
                          C                  + F+ ++ L    C+ L   P     
Sbjct: 600 ---------------CLSKSLS-------SSILSKKFQDMTILILDHCEYLTHIPDVSGL 637

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                ++F  C NLI                     + +SI  L  LE L   GC++LKR
Sbjct: 638 SNLEKLSFECCYNLI--------------------TIHNSIGHLNKLERLSAFGCRKLKR 677

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSD-RTPITELPSSFENLPGLE 589
                  L SL  L +  C +L+ FPE+L KM ++K I  D    I ELPSSF+NL    
Sbjct: 678 FPP--LGLASLKELDICCCSSLKSFPELLCKMTNIKEIDLDYNISIGELPSSFQNL---- 731

Query: 590 VLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
                  S+LD L                         SV  + MLR    +     + F
Sbjct: 732 -------SELDEL-------------------------SVREARMLRFPKHNDRMYSKVF 759

Query: 650 PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFI 709
            +   L +    L   SD  ++ +   + +  ++E+L LS NNF+ LP  + +   L+ +
Sbjct: 760 SKVTKLRIYECNL---SDEYLQIV---LKWCVNVELLDLSHNNFKILPECLSECHHLKHL 813

Query: 710 HLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
            L   + L+ +  +P  LK L    CK L S
Sbjct: 814 GLHYCSSLEEIRGIPPNLKELSAYQCKSLSS 844


>gi|357487985|ref|XP_003614280.1| TMV resistance protein N [Medicago truncatula]
 gi|355515615|gb|AES97238.1| TMV resistance protein N [Medicago truncatula]
          Length = 1024

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 188/591 (31%), Positives = 288/591 (48%), Gaps = 67/591 (11%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEG-SCFVSDVRG--NSETAGGLEHLQ 58
           D S  V I+GIWGMGG GKTT AKA+++Q    F+G + FV  +R   ++ + G +  LQ
Sbjct: 202 DQSWKVCIIGIWGMGGSGKTTTAKALYNQIHRRFQGRTSFVESIREVCDNNSRGAIT-LQ 260

Query: 59  KQMLSTTLSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           KQ+L      K ++ G  +  +    R++  K+L+VLDDV +  QLK L       G GS
Sbjct: 261 KQLLLDLFEIKQKIHGVALGKNKIMTRLQGQKVLVVLDDVTKSEQLKALCENPKLLGSGS 320

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            +++TTRD R+L+ F+ +   +Y +  ++  ++ E F   AF++ +  +  +  SR+VV+
Sbjct: 321 VLIITTRDLRLLKSFKVDH--VYTMTEMDKHQSLELFSCHAFQQPNPRDKFSELSRNVVA 378

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KS 236
           Y KG PL LEVLG  L  + +  W   L  L +I     +D+  IL+IS++ L     K 
Sbjct: 379 YCKGLPLALEVLGRYLSERTEQEWRCALSKLEKIPN---NDVQQILRISYDGLEDYTQKD 435

Query: 237 IFLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSI-SGNFLNMHDILQEMGR 292
           IFLDI CFF G+++  V  IL+         + ILI++SLV +   N L MHD+L++MGR
Sbjct: 436 IFLDICCFFIGKNRADVTEILNGCGLHAYSGISILIERSLVKVEKNNTLGMHDLLRDMGR 495

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
            I  + S KEP K SRLW   +++ VL    GT+ +EG+  +L +         AF  M 
Sbjct: 496 SIAGESSIKEPAKHSRLWFHDDVNDVLLKKNGTEIVEGLIFELPRTHRTRFGTNAFQEMK 555

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            LRL K                         V L      + K+LR++ W     + +P 
Sbjct: 556 KLRLLKL----------------------DGVDLIGDYGLISKQLRWVDWQRPTFKCIPD 593

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           +    NLV   L+ S + Q W+  K      I N  +   L                   
Sbjct: 594 DSDLGNLVVFELKHSNIGQVWQEPKLLGKLKILNVSHNKYLK------------------ 635

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
            +T +FS   NL           +L +    ++ EV  SI  L ++ +++LR CK L  +
Sbjct: 636 -ITPDFSKLPNL----------EKLIMKDCPSLIEVHQSIGDLKNIVLINLRDCKSLANL 684

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
                KL S+ TLIL GC  +E   E + +ME L  + +  T I ++P S 
Sbjct: 685 PREIYKLISVKTLILSGCSKIEKLEEDIMQMESLTALIAANTGIKQVPYSI 735



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 20/229 (8%)

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
           G +    L  S I +V    + L  L++L++   K LK I+  F KL +L  LI+  C +
Sbjct: 598 GNLVVFELKHSNIGQVWQEPKLLGKLKILNVSHNKYLK-ITPDFSKLPNLEKLIMKDCPS 656

Query: 552 LEHFPEILEKMEHLKRIY----SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
           L    E+ + +  LK I      D   +  LP     L  ++ L +  CSK++ L ++I 
Sbjct: 657 L---IEVHQSIGDLKNIVLINLRDCKSLANLPREIYKLISVKTLILSGCSKIEKLEEDIM 713

Query: 608 SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL--ESFPRTFLLGLSAM--GLL 663
            +E L  ++AA + I Q+P S+A S  +  +     +GL  + FP      +S       
Sbjct: 714 QMESLTALIAANTGIKQVPYSIARSKSIAYISLCGYEGLSRDVFPSLIWSWMSPTRNSQS 773

Query: 664 HISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE 712
           HI  +A   +        SL  L +  NN E    ++  +S+LR +  +
Sbjct: 774 HIFPFAGNSL--------SLVSLDVESNNMEYQSPMLTVLSKLRCVWFQ 814


>gi|297794769|ref|XP_002865269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311104|gb|EFH41528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 711

 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 172/486 (35%), Positives = 255/486 (52%), Gaps = 66/486 (13%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  +  +GIWGM GIGKT +++  F+Q +  FE  CF+ D    +    GL  L+++ L 
Sbjct: 205 SHDIYRLGIWGMPGIGKTAISQESFNQMTKHFETQCFIQDFHV-AFNDKGLYVLREEYLI 263

Query: 64  TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQ-FGQGSRIVVT 122
             L EK                   ++L+VLDDV      +  +G  D  FG  S ++++
Sbjct: 264 DKLREK-------------------RVLVVLDDVRNPMDAESFLGGFDHCFGPESLMIIS 304

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNW--HSRSVVSYTK 180
           +RDK+VL + + +   +Y +  L  +EA   F  FAF E   P D N    S+ VV Y  
Sbjct: 305 SRDKQVLHQCQVD--SVYEIPALNKKEAQRLFTRFAFSEKE-PSDTNLIEVSKKVVEYAD 361

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           GNPL L   G  L  K+     +V+ +  +I +S   +I  + K S+++L+   +SIFLD
Sbjct: 362 GNPLALCHYGRELGKKKPE---EVVAEFEKIKQSPPREIMHVFKSSYDELSENERSIFLD 418

Query: 241 IACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVR 296
           IA FF GE+ D+V  IL+         +D L+++SL+ IS  N + M  ++Q++ R IV 
Sbjct: 419 IAFFFNGENLDYVMRILEGCGFFPHVGIDRLVERSLLMISKNNNVEMQILIQDIARNIVN 478

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNK--GTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           +E + +  +  RLWDP  I   L+ NK  GT+ IEGIFLD +K+  ++++P+AF NM NL
Sbjct: 479 EE-KNQITRHRRLWDPSIIKSFLEENKPKGTEVIEGIFLDTTKLT-VDVNPKAFENMYNL 536

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL K Y           S ST+E        LP GL  LP +LR LHW+ YPLR+ P +F
Sbjct: 537 RLLKIYSSN--------SESTQE------FHLPKGLRSLPYELRLLHWEKYPLRSFPEDF 582

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY---------------LSALSFKGCQ 459
            P++LVELN+  S ++  WEG K+ V   I N  +               L  +  +GC 
Sbjct: 583 DPRHLVELNMPYSHLQNLWEGTKSLVKLKIINLSHSQQLVEVDVLLKACSLEQIHLQGCT 642

Query: 460 SLRSFP 465
           SL S P
Sbjct: 643 SLESIP 648


>gi|357486935|ref|XP_003613755.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515090|gb|AES96713.1| Disease resistance-like protein [Medicago truncatula]
          Length = 790

 Score =  247 bits (630), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 196/593 (33%), Positives = 281/593 (47%), Gaps = 102/593 (17%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE 68
           +VGI+GMGG GKTTLA A+++  + +F+  CF+ D+R NS   G L  LQK +L      
Sbjct: 1   MVGIYGMGGSGKTTLACAVYNCIADQFDSFCFLGDIRENSLKCG-LVQLQKMLL------ 53

Query: 69  KLEVAGPNIPHF---------TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
             E+ G N   F          + R+R  K+L++LDDV+ + QLK L G++        +
Sbjct: 54  -FELTGKNDIKFCSLNKAIPIIESRLRGKKVLLILDDVDSLEQLKALAGDI------CCM 106

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
            +  ++  V E  R E  +++R +              AFK N         S+  V Y+
Sbjct: 107 FMVLKESEVEELSRAEVLELFRWD--------------AFKTNEMDRSYEDISKRAVLYS 152

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
            G PL +E++ S L  K    W   L    +I      +I +IL++S++ L   VK IFL
Sbjct: 153 NGLPLAVEIIVSDLYGKTILEWKSALDTYEKI---PYENIQEILRVSYHGLKEFVKEIFL 209

Query: 240 DIACFFEGEDKDFVASIL---DDSESD-VLDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
           DIACFF+G     + +IL    D + D  + +L+DKSL+ I    + +HD++++MGR+IV
Sbjct: 210 DIACFFKGYRLSDILNILCSGRDFDPDYAIQVLVDKSLIKIDDRHVRLHDMIEDMGREIV 269

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           R ES  +PG+RSRLW  K+I  V K NKG+D  E I L L K K +  D  A   M NL+
Sbjct: 270 RLESPAKPGERSRLWFYKDILNVFKENKGSDKTEIIMLHLVKDKEVQWDGNALKKMENLK 329

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
           +                      L   K +   G ++LPK LR L W  YP  +LP +F 
Sbjct: 330 I----------------------LVIEKARFSIGPNHLPKSLRVLKWRDYPESSLPVHFD 367

Query: 416 PKNLVELNLRCSKVEQPWE----------GEKACVP--SSIQNFKYLSALSFKG------ 457
           PK LV L+L  S +    +           +   VP  S  QN K L   SFK       
Sbjct: 368 PKKLVILDLSMSCITFNNQVIIVSMVSKYVDIYLVPDMSGAQNLKKLHLDSFKNLVEVHD 427

Query: 458 ---------------CQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV---TRLYL 499
                          C SLR  P  ++     T++F  C +L  FP+I GK+   T L L
Sbjct: 428 SVGFLGKLEDLNLNRCTSLRVLPHGINLPSLKTMSFRNCASLKSFPEILGKMENTTYLGL 487

Query: 500 GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
             + I E+P SI  L  L  L +  CK L  + +S   L  L TL    C +L
Sbjct: 488 SDTGISELPFSIGLLEGLATLTIDRCKELLELPSSIFMLPKLETLEAYSCKDL 540


>gi|224143578|ref|XP_002336058.1| predicted protein [Populus trichocarpa]
 gi|222869691|gb|EEF06822.1| predicted protein [Populus trichocarpa]
          Length = 722

 Score =  247 bits (630), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 205/573 (35%), Positives = 282/573 (49%), Gaps = 73/573 (12%)

Query: 145 LEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKV 204
           L +EEA + F + A K      D     + + S+ +GNPL L VL SSL  K    W   
Sbjct: 9   LNYEEALQLFSSKALKNCIPTIDHRDLIKRIASHVQGNPLALIVLSSSLYGKSPEEWYSA 68

Query: 205 LHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDD--SES 262
           L+ L     ++   I + L+IS+N L    +SIFLDIA FF   +++    ILD      
Sbjct: 69  LNKL-----AQNPRIENALRISYNGLYQEQQSIFLDIAHFFRKFEQNQATRILDGFYGRP 123

Query: 263 DVLDI--LIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLK 320
            + DI  LIDK L++ S N L +HD+LQEM   IVR ES K PGKRSRL    +I  VL+
Sbjct: 124 VIFDISMLIDKCLITTSRNMLEIHDLLQEMAFSIVRAES-KFPGKRSRLCHLTDIVHVLE 182

Query: 321 HNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQL 379
            NKGT+ IEGI LD+S++ + I+L   AF  M  LR  KF+     +  K          
Sbjct: 183 ENKGTEEIEGISLDMSRLSRQIHLKSDAFAMMDGLRFIKFFFGHLSQDNK---------- 232

Query: 380 SYSKVQLP-NGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA 438
              K+ LP  GL+YL  KLRYLHWD +P ++LP  F  + LVELNL  SKVE+ W   + 
Sbjct: 233 --DKMHLPPTGLEYLSNKLRYLHWDGFPSKSLPHVFCAEYLVELNLSRSKVEKLWTRVQD 290

Query: 439 CVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK---VT 495
               ++Q F                               SY   L E P +S     V+
Sbjct: 291 V--GNVQKFV-----------------------------LSYSPYLTELPDLSKARNLVS 319

Query: 496 RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLV--TLILLGCLNLE 553
              +   ++ EVP S++ L  LE LDL  C  L+    SF  L S V   L +  CL++ 
Sbjct: 320 LRLVDCPSLTEVPFSLQYLDKLEELDLNFCYNLR----SFPMLDSKVLKVLSISRCLDMT 375

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
             P I + M   K +Y + T I E+P S  +   LE L +  CSK+   P+  G ++ LY
Sbjct: 376 KCPTISQNM---KSLYLEETSIKEVPQSITS--KLENLGLHGCSKITKFPEISGDVKTLY 430

Query: 614 YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
               + +AI ++PSS+     L  LD S C  LESFP    + + ++  L++S   ++EI
Sbjct: 431 ---LSGTAIKEVPSSIQFLTRLCVLDMSGCSKLESFPE-IAVPMKSLVDLNLSKTGIKEI 486

Query: 674 PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
           P     + SL  L L G   E LP  IK M  L
Sbjct: 487 PSSFKQMISLRSLGLDGTPIEELPLSIKDMKPL 519



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 130/278 (46%), Gaps = 33/278 (11%)

Query: 669 AVREIPQEIAYLSSLEILYLS-GNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCL 727
           ++ E+P  + YL  LE L L+   N  S P +  ++  L+ + +     +   P +   +
Sbjct: 327 SLTEVPFSLQYLDKLEELDLNFCYNLRSFPMLDSKV--LKVLSISRCLDMTKCPTISQNM 384

Query: 728 KYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELP 787
           K L+L +  + +    +   LE+L L GC+ +   PE+   ++ L L       ++ E+P
Sbjct: 385 KSLYLEETSIKEVPQSITSKLENLGLHGCSKITKFPEISGDVKTLYLSGT----AIKEVP 440

Query: 788 LCLQLLT------VRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAI 841
             +Q LT      +  C++L+S PEI + ++ L             DL  +   +K    
Sbjct: 441 SSIQFLTRLCVLDMSGCSKLESFPEIAVPMKSL------------VDLNLSKTGIKEIPS 488

Query: 842 CFEFTNCLKLNGKANNKILADSLLRIRHMA--IASLRLGYEMAINEKLSELRGSLIVLPG 899
            F+    L+  G     I  +  L I+ M   IA++ L  +         ++   +VLPG
Sbjct: 489 SFKQMISLRSLGLDGTPI-EELPLSIKDMKPLIAAMHLKIQSGDKIPYDRIQ---MVLPG 544

Query: 900 SEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
           SEIP+WFS++  GSS+ IQLP  ++C  L G AFC V 
Sbjct: 545 SEIPEWFSDKGIGSSLTIQLP--TNCHQLKGIAFCLVF 580


>gi|297801412|ref|XP_002868590.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314426|gb|EFH44849.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 624

 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 165/442 (37%), Positives = 248/442 (56%), Gaps = 36/442 (8%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNS-----ETAGGLEHLQK 59
           D V+++GI G  GIGKTT+A+A+F+Q S  F+  CF+ +++G+      +  G    LQ 
Sbjct: 203 DGVKMIGIQGPAGIGKTTIARALFNQLSANFQLKCFIENLKGSYGSDVIDDYGSKLCLQN 262

Query: 60  QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           Q+LS  L+EK       I H    KER+   K+LIVLDDV+++ QL  L  E   FG GS
Sbjct: 263 QLLSKILNEK----DMTIDHLGAIKERLLDQKVLIVLDDVDDLEQLDVLAKEPSWFGLGS 318

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI VTT D+++L         IY V     EEA E  C  AF++N         ++ + +
Sbjct: 319 RIFVTTEDRQILNAHW--VNYIYHVGYPSEEEALEILCLSAFQKNSPLVGFEELAKKITN 376

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           +    PL L V+GSSL  + +  W + L  L    + +I ++   L++ + KL+ + +S+
Sbjct: 377 FCGSLPLGLRVVGSSLRRESRHEWERQLSKLETSLDRKIENV---LRVGYCKLSKKDQSL 433

Query: 238 FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGRQ 293
           FL IA FF  E  D V ++L DS  D+   +  L DKSLV IS   ++ MH +LQ++GRQ
Sbjct: 434 FLHIALFFNNETVDHVTTMLADSNLDISNGMKTLADKSLVHISTIGWIKMHRLLQQLGRQ 493

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           +V ++S+ +PGKR  L + +EI  VL +  GT ++ GI  D+SKI   ++  RAF  M N
Sbjct: 494 LVHEQSD-DPGKRQFLVEAEEIRDVLANETGTGSVIGISFDMSKISEFSITGRAFEGMRN 552

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LR  + Y   F         S +  L  S+      ++YLP +L+ LHWD+YP + LP  
Sbjct: 553 LRFLRIYGRYF---------SKDVTLGISE-----DMEYLP-RLKLLHWDSYPRKRLPQT 597

Query: 414 FKPKNLVELNLRCSKVEQPWEG 435
           F+P+ L+EL ++ SK E+ W G
Sbjct: 598 FRPECLIELRMQFSKREKLWGG 619


>gi|357499885|ref|XP_003620231.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355495246|gb|AES76449.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1489

 Score =  246 bits (629), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 277/886 (31%), Positives = 440/886 (49%), Gaps = 115/886 (12%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S+DT+ +VGI G+GGIGKTTLA  +++   H+F+ SCF   VR   E+  GL +LQK +L
Sbjct: 207  SNDTIHMVGIHGIGGIGKTTLALEVYNSIVHQFQCSCFFEKVRDFKES--GLIYLQKILL 264

Query: 63   STTLSE-KLEVA----GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            S  + E  +E+     G +I    ++R+ + K+L++LDDV++  QLK + G  + FG GS
Sbjct: 265  SQIVGETNMEITSVRQGVSI---LQQRLHQKKVLLLLDDVDKDEQLKAIAGSSEWFGLGS 321

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP------------ 165
            R+++TTRDKR+L  + G E++ Y V GL   +AF+     A K  + P            
Sbjct: 322  RVIITTRDKRLL-TYHGIERR-YEVKGLNDADAFDLVGWKALKNYYSPSYKDVLLEQKQG 379

Query: 166  ---------------EDLNWHS-----RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVL 205
                           +D+ + S     +  V+Y  G PL LEV+GS    K       VL
Sbjct: 380  RELNANELCRLKYLKKDVRFSSYANVLKRAVAYASGLPLALEVIGSHFFNKTIEQCNHVL 439

Query: 206  HDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDVL 265
                R+ + +I      L++SF+ L    K +FLDIAC  +G +   V  IL     +++
Sbjct: 440  DRCERVPDKKIQTT---LQVSFDALQDEDKFVFLDIACCLKGWNLTRVEEILHAHYGNIM 496

Query: 266  ----DILIDKSLV--SISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVL 319
                D+L++KSL+  S+SGN + +HD++++MG++IVR+ES ++PGKR+RLW  ++I +V 
Sbjct: 497  KDHIDVLVEKSLIKISVSGN-VTLHDLIEDMGKEIVRRESPEDPGKRTRLWAYEDIKKVF 555

Query: 320  KHNKGTDAIEGIFLDLS---KIKGINLDPRAFTNMSNLRLFKFYVPK-FYEI-EKLPSM- 373
            K N GT  I+ I        + K    D +AF  M NLR   F  P  F E  E +P+  
Sbjct: 556  KENTGTSTIKIIHFQFDPWIEKKKDASDGKAFKKMKNLRTLIFSTPVCFSETSEHIPNSL 615

Query: 374  ----STEEQLSYSKVQLPNGLD---YLPKK---LRYLHWDTYPLRT-LPSNFKPKNLVEL 422
                 +    +Y   +  N  +   +L KK   ++ L++D   L T +P      NL + 
Sbjct: 616  RVLEYSNRNRNYYHSRGSNLFEWDGFLKKKFENMKVLNYDCDTLLTRMPDISNLPNLEQF 675

Query: 423  NLR-CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYC 481
            +++ C+ +          +  S+     L  L   GC +L+S P  L+    V +N S+C
Sbjct: 676  SIQDCTSL--------ITIDESVGFLSKLKILRLIGCNNLQSVPP-LNSASLVELNLSHC 726

Query: 482  VNLIEFPQ-ISG-----KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF 535
             +L  FP  +SG     K+ R+ +G S I  +PS +  L  LE LDL  C  L   S   
Sbjct: 727  HSLESFPPVVSGFLGELKILRV-IGSSKIRLIPSLV--LPSLEELDLLDCTSLDSFSHMV 783

Query: 536  CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
               + L T+   GC  L   P +  K++ L+++Y    P     S  + L  LE L + +
Sbjct: 784  FGDK-LKTMSFRGCYELRSIPPL--KLDSLEKLYLSYCPNLVSISPLK-LDSLEKLVLSN 839

Query: 596  CSKLDNLPDNI----GSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
            C KL++ P  +    G L+ L+  +     +  +P+    S  L  LD SHC+ L S   
Sbjct: 840  CYKLESFPSVVDGFLGKLKTLF--VRNCHNLRSIPTLKLDS--LEKLDLSHCRNLVSISP 895

Query: 652  TFLLGLSAMGLLHISDYAVREIPQEI-AYLSSLEILYLSG-NNFESLPAI-IKQMSQLRF 708
              L  L  +GL +   Y +   P  +  +L  L+ L++   +N  S+P + +  + +L  
Sbjct: 896  LKLDSLETLGLSNC--YKLESFPSVVDGFLGKLKTLFVRNCHNLRSIPTLRLDSLEKLDL 953

Query: 709  IHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLP--VLPFC--LESLDLTGCNMLRSLPE 764
             H    N++  LP     L+ L+L  C  L+S P  V  F   L++L +  C+ LRS+P 
Sbjct: 954  SHCR--NLVNILPLKLDSLEKLYLSSCYKLESFPNVVDGFLGKLKTLFVKSCHNLRSIPA 1011

Query: 765  LPL-CLQYLNLEDCNMLRSLPELPL-CLQLLTVRNCNRLQSLPEIL 808
            L L  L+ L L  C  L S+  L L  L+ L + NC +L+S P ++
Sbjct: 1012 LKLDSLEKLYLSYCRNLVSISPLKLDSLEKLVISNCYKLESFPGVV 1057



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 190/398 (47%), Gaps = 51/398 (12%)

Query: 450  LSALSFKGCQSLRSFPS---------------NLHFVCPVTIN------FSYCVNLIEFP 488
            L  +SF+GC  LRS P                NL  + P+ ++       S C  L  FP
Sbjct: 788  LKTMSFRGCYELRSIPPLKLDSLEKLYLSYCPNLVSISPLKLDSLEKLVLSNCYKLESFP 847

Query: 489  QIS----GKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVT 543
             +     GK+  L++     +  +P+    L  LE LDL  C+ L  +S S  KL SL T
Sbjct: 848  SVVDGFLGKLKTLFVRNCHNLRSIPTLK--LDSLEKLDLSHCRNL--VSISPLKLDSLET 903

Query: 544  LILLGCLNLEHFPEILEK-MEHLKRIYSDRTP-ITELPSSFENLPGLEVLFVEDCSKLDN 601
            L L  C  LE FP +++  +  LK ++      +  +P+    L  LE L +  C  L N
Sbjct: 904  LGLSNCYKLESFPSVVDGFLGKLKTLFVRNCHNLRSIPTL--RLDSLEKLDLSHCRNLVN 961

Query: 602  -LPDNIGSLEYLYYILAAASAISQLPSSV-ALSNMLRSLDSSHCKGLESFPRTFLLGLSA 659
             LP  + SLE LY  L++   +   P+ V      L++L    C  L S P    L L +
Sbjct: 962  ILPLKLDSLEKLY--LSSCYKLESFPNVVDGFLGKLKTLFVKSCHNLRSIPA---LKLDS 1016

Query: 660  MGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQM-SQLRFIHLEDFNML 717
            +  L++S Y    +      L SLE L +S     ES P ++  +  +L+ + +++ + L
Sbjct: 1017 LEKLYLS-YCRNLVSISPLKLDSLEKLVISNCYKLESFPGVVDGLLDKLKTLFVKNCHNL 1075

Query: 718  QSLPELPL-CLKYLHLIDCKMLQSLPVLPF-CLESLDLTGCNMLRSLPE----LPLCLQY 771
            +S+P L L  L+ L L  C  L S+P L    LE+L+L+ C  L S P     L   L++
Sbjct: 1076 RSIPALKLDSLEKLDLSHCHNLVSIPSLKLDSLETLNLSDCYKLESFPSVVDGLLDKLKF 1135

Query: 772  LNLEDCNMLRSLPELPLC-LQLLTVRNCNRLQSLPEIL 808
            LN+E+C MLR++P L L  L+   +  C RL+S PEIL
Sbjct: 1136 LNIENCIMLRNIPRLSLTSLEQFNLSCCYRLESFPEIL 1173



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 135/295 (45%), Gaps = 36/295 (12%)

Query: 450  LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS-GKVTRLYLGQS-AIEEV 507
            L  L  K C +LRS P+ L       ++ S+C NL+  P +    +  L L     +E  
Sbjct: 1064 LKTLFVKNCHNLRSIPA-LKLDSLEKLDLSHCHNLVSIPSLKLDSLETLNLSDCYKLESF 1122

Query: 508  PSSIECLTD-LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLK 566
            PS ++ L D L+ L++  C  L+ I      L SL    L  C  LE FPEIL +M ++ 
Sbjct: 1123 PSVVDGLLDKLKFLNIENCIMLRNIPR--LSLTSLEQFNLSCCYRLESFPEILGEMRNIP 1180

Query: 567  RIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLP 626
            R++ D TPI ELP  F+NL   +  +  +C      P+              AS +S++ 
Sbjct: 1181 RLHLDETPIKELPFPFQNLTQPQTYYPCNCGH-SCFPNR-------------ASLMSKMA 1226

Query: 627  S-SVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEI 685
              S+     +  + SSH K +             +    +SD     + + +   ++++ 
Sbjct: 1227 ELSIQAEEKMSPIQSSHVKYI------------CVKKCKLSD---EYLSKTLMLFANVKE 1271

Query: 686  LYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
            L+L+ + F  +P  I++ + L  + L+D   L+ +  +P CL+ L  ++CK+  S
Sbjct: 1272 LHLTNSKFTVIPKSIEKCNFLWKLVLDDCKELEEIKGIPPCLRELSAVNCKLTSS 1326



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 182/422 (43%), Gaps = 58/422 (13%)

Query: 441  PSSIQNF-KYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIE-FPQISGKVTRLY 498
            PS +  F   L  L  + C +LRS P+ L       ++ S+C NL+   P     + +LY
Sbjct: 916  PSVVDGFLGKLKTLFVRNCHNLRSIPT-LRLDSLEKLDLSHCRNLVNILPLKLDSLEKLY 974

Query: 499  LGQS-AIEEVPSSIEC-LTDLEVLDLRGCKRLKRIST-----------SFC--------- 536
            L     +E  P+ ++  L  L+ L ++ C  L+ I             S+C         
Sbjct: 975  LSSCYKLESFPNVVDGFLGKLKTLFVKSCHNLRSIPALKLDSLEKLYLSYCRNLVSISPL 1034

Query: 537  KLRSLVTLILLGCLNLEHFPEILEKM-EHLKRIYSDR------TPITELPS--------- 580
            KL SL  L++  C  LE FP +++ + + LK ++          P  +L S         
Sbjct: 1035 KLDSLEKLVISNCYKLESFPGVVDGLLDKLKTLFVKNCHNLRSIPALKLDSLEKLDLSHC 1094

Query: 581  -SFENLPGL-----EVLFVEDCSKLDNLPDNI-GSLEYLYYILAAASAISQLPSSVALSN 633
             +  ++P L     E L + DC KL++ P  + G L+ L ++      + +    ++L++
Sbjct: 1095 HNLVSIPSLKLDSLETLNLSDCYKLESFPSVVDGLLDKLKFLNIENCIMLRNIPRLSLTS 1154

Query: 634  MLRSLDSSHCKGLESFPRTFLLG-LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNN 692
             L   + S C  LESFP   +LG +  +  LH+ +  ++E+P     L+  +  Y     
Sbjct: 1155 -LEQFNLSCCYRLESFPE--ILGEMRNIPRLHLDETPIKELPFPFQNLTQPQTYYPCNCG 1211

Query: 693  FESLP---AIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLE 749
                P   +++ +M++L     E  + +QS     +C+K   L D  + ++L +L   ++
Sbjct: 1212 HSCFPNRASLMSKMAELSIQAEEKMSPIQSSHVKYICVKKCKLSDEYLSKTL-MLFANVK 1270

Query: 750  SLDLTGCNMLRSLPELPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEI 807
             L LT          +  C  L  L L+DC  L  +  +P CL+ L+  NC    S    
Sbjct: 1271 ELHLTNSKFTVIPKSIEKCNFLWKLVLDDCKELEEIKGIPPCLRELSAVNCKLTSSCKSN 1330

Query: 808  LL 809
            LL
Sbjct: 1331 LL 1332


>gi|22325729|ref|NP_179298.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251488|gb|AEC06582.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1195

 Score =  246 bits (627), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 196/642 (30%), Positives = 312/642 (48%), Gaps = 85/642 (13%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S    +IVG+ GM GIGKTTL K ++D++ H F+    + ++R  S+  G    L++ +L
Sbjct: 237 SRKETRIVGVLGMPGIGKTTLVKRLYDEWKHNFQRHLHMVNIRQKSKEYG-THSLERMIL 295

Query: 63  STTLSEKLEVAGPNIPHFT-KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
              LS+        + + + K+ + + K+L+VLDDV+   Q++ L+G L+   +GSRIV+
Sbjct: 296 KELLSDTYNDITEEMTYASVKDELLKKKVLLVLDDVSSKKQIQGLLGNLNWIRKGSRIVI 355

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH--SRSVVSYT 179
           TTRDK  + +F    +  Y V  L   +  + F  +AF++++CP   N    S   V Y 
Sbjct: 356 TTRDKISISQF----EYTYVVPRLNITDGLKQFSFYAFEDHNCPYPGNLMDLSTKFVDYA 411

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           +GNPL L++LG  L    K  W K L  L ++    I  I D+L+ S++ L+ + K +FL
Sbjct: 412 RGNPLALKILGRELLSIDKDQWPKRLDTLAQL---PIPYIQDLLRASYDDLSNQQKEVFL 468

Query: 240 DIACFFEGEDKDFVASILD--------DSESDVLDILIDKSLVSISGNFLNMHDILQEMG 291
            +A FF   D+ ++ S++D        D+ S+V D      L+SIS   L MHD++    
Sbjct: 469 VVAWFFGSGDEYYIRSLVDTEDPDSADDAASEVRD-FAGNLLISISSGRLEMHDLMATFA 527

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNK--------------GTDAIEGIFLDLSK 337
           +++    S +       +W+ +  +   K+ +                D + GI LD+S+
Sbjct: 528 KKLCSSLSNENNYGYQMIWNHESFNAAAKNKRMRYVNQPRKKVTESEMDNVMGILLDVSE 587

Query: 338 I-KGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKK 396
           +   + LD + F+ M NLR  K Y           S  + +     K+  P+GL    + 
Sbjct: 588 MDNNMTLDSKFFSEMCNLRYLKVY----------NSQCSRDCDVGCKLTFPDGLKCSMEN 637

Query: 397 LRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK------------------- 437
           +RYL+W  +PL+ L   F PKNL+ELNL  SK+ + W+  K                   
Sbjct: 638 VRYLYWLQFPLKKLSKAFNPKNLIELNLPYSKITRLWKESKEISKLKWVDLSHSSELCDI 697

Query: 438 ---------------ACV-----PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
                           C+     P  +Q  + L  L+  GC  L S P         T+ 
Sbjct: 698 SGLIGAHNIRRLNLEGCIELKTLPQEMQEMESLIYLNLGGCTRLVSLPE-FKLKSLKTLI 756

Query: 478 FSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
            S+C N  +FP IS  +  LYL  +AI+ +P+SIE L  L +LDL+ C+ L  +      
Sbjct: 757 LSHCKNFEQFPVISECLEALYLQGTAIKCIPTSIENLQKLILLDLKDCEVLVSLPDCLGN 816

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP 579
           LRSL  LIL GC  L+ FPE+ E M+ +K +  D T I ++P
Sbjct: 817 LRSLQELILSGCSKLKFFPELKETMKSIKILLLDGTAIKQMP 858



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 161/364 (44%), Gaps = 37/364 (10%)

Query: 591  LFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            L +E C +L  LP  +  +E L Y+ L   + +  LP     S  L++L  SHCK  E F
Sbjct: 709  LNLEGCIELKTLPQEMQEMESLIYLNLGGCTRLVSLPEFKLKS--LKTLILSHCKNFEQF 766

Query: 650  PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRF 708
            P    +    +  L++   A++ IP  I  L  L +L L       SLP  +  +  L+ 
Sbjct: 767  P----VISECLEALYLQGTAIKCIPTSIENLQKLILLDLKDCEVLVSLPDCLGNLRSLQE 822

Query: 709  IHLEDFNMLQSLPELPLCLKYLH--LIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP 766
            + L   + L+  PEL   +K +   L+D   ++ +P+L  C++S   +  N  ++LP   
Sbjct: 823  LILSGCSKLKFFPELKETMKSIKILLLDGTAIKQMPILLQCIQSQGHSVAN--KTLPN-S 879

Query: 767  LCLQYLNL---------EDCNMLRSLPELPLCLQLLTVRNCNRLQS---LPEILLCLQEL 814
            L   YL            D   L +       L+ L ++NC +L+S   LP  L CL   
Sbjct: 880  LSDYYLPSSLLSLCLSGNDIESLHANISQLYHLKWLDLKNCKKLKSVSVLPPNLKCLDAH 939

Query: 815  DASVLEKLSKHSPDLQWAPESLKSAAIC-FEFTNCLKLNGKANNKILADSLLRIRHMAIA 873
                LE++   SP    A   +     C + FTNC KL+  A + I++ +  + + M+ A
Sbjct: 940  GCDSLEEVG--SP---LAVLMVTGKIHCTYIFTNCNKLDQVAESNIISFTWRKSQMMSDA 994

Query: 874  SLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAF 933
              R      +   +S         PG E+P  F +Q+ G+ +  +LP H     L G A 
Sbjct: 995  LNRYNGGFVLESLVS------TCFPGCEVPASFDHQAYGALLQTKLPRHWCDSRLTGIAL 1048

Query: 934  CAVL 937
            CAV+
Sbjct: 1049 CAVI 1052


>gi|22326876|ref|NP_197291.2| protein DA1-related 4 [Arabidopsis thaliana]
 gi|302595926|sp|Q9FKN7.2|DAR4_ARATH RecName: Full=Protein DA1-related 4
 gi|332005099|gb|AED92482.1| protein DA1-related 4 [Arabidopsis thaliana]
          Length = 1613

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 197/709 (27%), Positives = 332/709 (46%), Gaps = 116/709 (16%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ +GIWGM GIGKTTLAKA+F+  S +++ SCF+ +    +    GL  L K+ +   L
Sbjct: 189 IRSIGIWGMPGIGKTTLAKAVFNHMSTDYDASCFIENF-DEAFHKEGLHRLLKERIGKIL 247

Query: 67  SEKLEVAGPNI--PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            ++ ++    I  P   ++++   ++L+VLDDV +    +  +  LD FG GS I++T+ 
Sbjct: 248 KDEFDIESSYIMRPTLHRDKLYDKRILVVLDDVRDSLAAESFLKRLDWFGSGSLIIITSV 307

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           DK+V      +  +IY V GL   EA + F    F  N   ++    S  V+ Y  GNPL
Sbjct: 308 DKQVFA--FCQINQIYTVQGLNVHEALQLFSQSVFGINEPEQNDRKLSMKVIDYVNGNPL 365

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L + G  L + +KS       +L      +I    D+LK +++ L+   K+I LDIA F
Sbjct: 366 ALSIYGREL-MGKKSEMETAFFELKHCPPLKIQ---DVLKNAYSALSDNEKNIVLDIAFF 421

Query: 245 FEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F+GE  ++V  +L++S       +D+L+DK +++IS N + M++++Q+  ++I   E E 
Sbjct: 422 FKGETVNYVMQLLEESHYFPRLAIDVLVDKCVLTISENTVQMNNLIQDTCQEIFNGEIE- 480

Query: 302 EPGKRSRLWDPKEISRVLKHNK---------------GTDAIEGIFLDLSKIKGINLDPR 346
                +R+W+P  I  +L++++                 + IE IFLD S +K  ++   
Sbjct: 481 ---TCTRMWEPSRIRYLLEYDELEGSGETKAMPKSGLVAEHIESIFLDTSNVK-FDVKHD 536

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           AF NM NL+  K Y      I              S +  P GLD LP +LR LHW+ YP
Sbjct: 537 AFKNMFNLKFLKIYNSCSKYI--------------SGLNFPKGLDSLPYELRLLHWENYP 582

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACV-------PSSIQ--------NFKYLS 451
           L++LP +F   +LV+L++  S++ +     K  V         S+Q          + + 
Sbjct: 583 LQSLPQDFDFGHLVKLSMPYSQLHKLGTRVKDLVMLKRLILSHSLQLVECDILIYAQNIE 642

Query: 452 ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVP--- 508
            +  +GC  L+ FP          +N S C  +  F  +   +  L+L  + I E+P   
Sbjct: 643 LIDLQGCTGLQRFPDTSQLQNLRVVNLSGCTEIKCFSGVPPNIEELHLQGTRIREIPIFN 702

Query: 509 ---------------SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
                          + +E  +D+E +DL     L  ++++   +  LV L +  C NL 
Sbjct: 703 ATHPPKVKLDRKKLWNLLENFSDVEHIDLECVTNLATVTSNNHVMGKLVCLNMKYCSNLR 762

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
             P+++                        +L  L+VL++  CS+L+ +     +L+ LY
Sbjct: 763 GLPDMV------------------------SLESLKVLYLSGCSELEKIMGFPRNLKKLY 798

Query: 614 YILAAASAISQLPSSVALSNMLRSLDSSHCKGL-------ESFPRTFLL 655
                 +AI +LP    L N L  L++  CK L       E  PR F+ 
Sbjct: 799 ---VGGTAIRELPQ---LPNSLEFLNAHGCKHLKSINLDFEQLPRHFIF 841



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 122/297 (41%), Gaps = 55/297 (18%)

Query: 554 HFPEILEKMEH-LKRIYSDRTPITELPSSFE--NLPGLEVLFVEDCSKLDNLPDNIGSLE 610
           +FP+ L+ + + L+ ++ +  P+  LP  F+  +L  L + +    S+L  L   +  L 
Sbjct: 561 NFPKGLDSLPYELRLLHWENYPLQSLPQDFDFGHLVKLSMPY----SQLHKLGTRVKDLV 616

Query: 611 YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL-GLSAMGL------- 662
            L  ++ + S        +  +  +  +D   C GL+ FP T  L  L  + L       
Sbjct: 617 MLKRLILSHSLQLVECDILIYAQNIELIDLQGCTGLQRFPDTSQLQNLRVVNLSGCTEIK 676

Query: 663 -----------LHISDYAVREIP------------------QEIAYLSSLEILYLSG-NN 692
                      LH+    +REIP                    +   S +E + L    N
Sbjct: 677 CFSGVPPNIEELHLQGTRIREIPIFNATHPPKVKLDRKKLWNLLENFSDVEHIDLECVTN 736

Query: 693 FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL--CLKYLHLIDCKMLQSLPVLPFCLES 750
             ++ +    M +L  ++++  + L+ LP++     LK L+L  C  L+ +   P  L+ 
Sbjct: 737 LATVTSNNHVMGKLVCLNMKYCSNLRGLPDMVSLESLKVLYLSGCSELEKIMGFPRNLKK 796

Query: 751 LDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSL----PELPLCLQLLTVRNCNRLQS 803
           L   G   +R LP+LP  L++LN   C  L+S+     +LP   +     NC R  S
Sbjct: 797 L-YVGGTAIRELPQLPNSLEFLNAHGCKHLKSINLDFEQLP---RHFIFSNCYRFSS 849


>gi|297837267|ref|XP_002886515.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332356|gb|EFH62774.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1028

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 199/647 (30%), Positives = 311/647 (48%), Gaps = 132/647 (20%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNS----ETAGGLEHLQK 59
           +D V +VGI G  GIGKTT+A+A+ + FS+ F+ SCF+ + RG+     +  G    LQ+
Sbjct: 204 NDGVMMVGISGPAGIGKTTIARALKNLFSNRFQLSCFMDNFRGSYPIGFDEYGFKLRLQE 263

Query: 60  QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           ++LS  L++    +G  I H    +ER+  MK+LI+LDDVN+V QL+ L+ E   FG GS
Sbjct: 264 ELLSKILNQ----SGMRISHLGVIQERLCDMKVLIILDDVNDVKQLEALVNENSWFGPGS 319

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI+VTT +K +L   R     +Y V     EEA +  C +AFK++         ++ V  
Sbjct: 320 RIIVTTENKEILH--RHGIDNVYNVGFPSDEEALKILCRYAFKQSSPRHSFLMMAKWVAQ 377

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                PL L V+GSSL  K +  W  ++  L  I + EI    ++L++ +  L    +++
Sbjct: 378 LCGNLPLGLRVVGSSLHGKNEDEWKYIVRRLETIMDGEIE---EVLRVGYESLHENEQTL 434

Query: 238 FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS--GNFLNMHDILQEMGR 292
           FL IA FF  ED D V ++L D+  D+   L ILI+KSL+ IS  G  L MH++LQ+MGR
Sbjct: 435 FLHIAIFFNYEDGDLVKAMLADNSLDIEHGLKILINKSLIHISSKGEIL-MHNLLQQMGR 493

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           Q +R++   EP KR  L D +EI  VL++N  T+A                         
Sbjct: 494 QAIRRQ---EPWKRRILIDAQEICDVLENN--TNA------------------------- 523

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
                  ++P+  E++ LP                         LR L W+ YP +TLP 
Sbjct: 524 -------HIPE--EMDYLPP------------------------LRLLRWEAYPSKTLPL 550

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEK----------------------------------A 438
            F P+NLVEL++  S++++ WEG +                                   
Sbjct: 551 RFCPENLVELSMEDSQLKKLWEGTQLLTNLKKMDLSRSLELKELPDLSNATNLETLELSG 610

Query: 439 C-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
           C     +PSSI N + L  +    CQ L   P+N++      I+ + C  L  FP  S  
Sbjct: 611 CTSLVELPSSIANLQKLEDIMMNSCQKLEVIPTNINLTSLKRIHMAGCSRLASFPNFSTN 670

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           +T L +  ++++ +P+ I   + L  +D+RG  + K  S         V  + L   +++
Sbjct: 671 ITALDISDTSVDVLPALIVHWSHLYYIDIRGRGKYKNASN----FPGCVGRLDLSYTDVD 726

Query: 554 HFPEILEKMEHLKRIY-SDRTPITELPSSFENLPGLEVLFVEDCSKL 599
             P+ ++ +  L+RIY S    +T LP     LP   +L + D  +L
Sbjct: 727 KIPDCIKDLLWLQRIYLSCCRKLTSLPE----LPNWLLLLIADNCEL 769



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 146/364 (40%), Gaps = 85/364 (23%)

Query: 563 EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAAS 620
           E+L  +  + + + +L    + L  L+ + +    +L  LPD  N  +LE L   L+  +
Sbjct: 555 ENLVELSMEDSQLKKLWEGTQLLTNLKKMDLSRSLELKELPDLSNATNLETLE--LSGCT 612

Query: 621 AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAY 679
           ++ +LPSS+A    L  +  + C+ LE  P    + L+++  +H++  + +   P     
Sbjct: 613 SLVELPSSIANLQKLEDIMMNSCQKLEVIPTN--INLTSLKRIHMAGCSRLASFPNFSTN 670

Query: 680 LSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQ 739
           +++L+I   S  + + LPA+I   S L +I +      ++    P C+  L L       
Sbjct: 671 ITALDI---SDTSVDVLPALIVHWSHLYYIDIRGRGKYKNASNFPGCVGRLDL----SYT 723

Query: 740 SLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCN 799
            +  +P C++ L               L LQ + L  C  L SLPELP  L LL   NC 
Sbjct: 724 DVDKIPDCIKDL---------------LWLQRIYLSCCRKLTSLPELPNWLLLLIADNCE 768

Query: 800 RLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKI 859
            L+ +                    +SP+ +              FTNC KL+G+     
Sbjct: 769 LLERVT----------------FPINSPNAE------------LIFTNCFKLDGETRKLF 800

Query: 860 LADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
           +  S L                               +PG  +P  F++++ G+S+ ++L
Sbjct: 801 IQQSFLS----------------------------NCIPGRVMPSEFNHRAKGNSVMVRL 832

Query: 920 PPHS 923
              S
Sbjct: 833 SSAS 836


>gi|6967115|emb|CAB72469.1| disease resistance protein homlog [Arabidopsis thaliana]
          Length = 1199

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 238/768 (30%), Positives = 371/768 (48%), Gaps = 113/768 (14%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG------NSETAGGLEHLQ 58
           D V+++GIWG  GIGKTT+A+ +F+Q S  F+ S  + ++RG        E +  L+ LQ
Sbjct: 287 DEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIIVNIRGIYPRPCFDEYSAQLQ-LQ 345

Query: 59  KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            QMLS  ++ K       I H    +ER+R  K+ +VLD+V+++GQL  L  E   FG G
Sbjct: 346 NQMLSQMINHK----DIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPG 401

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++TT D  VL K  G    +Y+V     +EAF+ FC  AF +    E  +  +  V+
Sbjct: 402 SRIIITTEDLGVL-KAHG-INHVYKVKYPSNDEAFQIFCMNAFGQKQPHEGFDEIAWEVM 459

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           +     PL L+VLGS+L  K K  W + L    R+  S   +I  I++ S++ L    K 
Sbjct: 460 ALAGELPLGLKVLGSALRGKSKPEWERTLP---RLKTSLDGNIGSIIQFSYDGLCDEDKY 516

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS-----GNFLNMHDILQ 288
           + L IAC F  E    V  +L +   DV   L +L  KSL+SI      G+ +NMH +L+
Sbjct: 517 LLLYIACLFNYESTTKVEEVLANKFLDVKQGLHVLAQKSLISIDENSLYGDTINMHTLLR 576

Query: 289 EMGRQIVRQESEKEP-GKRSRLWDPKEISRVLKHNK-GTDAIEGIFLDLSKIKG-INLDP 345
           + GR+  R++       KR  L   ++I  VL  +   +    GI  DL   +  +N+  
Sbjct: 577 QFGRETSRKQFVYHGFTKRQLLVGERDICEVLSDDTIDSRRFIGITFDLFGTQDYLNISE 636

Query: 346 RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
           +A   M++           +E  ++ ++   E+L   ++ L + + + P K+R L W +Y
Sbjct: 637 KALERMND-----------FEFVRINALIPTERL---QLALQDLICHSP-KIRSLKWYSY 681

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
               LPS F P+ LVEL++  SK+ + WEG K      ++N K+   +     + L+  P
Sbjct: 682 QNICLPSTFNPEFLVELHMSFSKLRKLWEGTK-----QLRNLKW---MDLSNSEDLKELP 733

Query: 466 SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
                      N S   NL E               S++ E+PSSIE LT L+ L L+ C
Sbjct: 734 -----------NLSTATNLEELK---------LRDCSSLVELPSSIEKLTSLQRLYLQRC 773

Query: 526 KRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL--EKMEHLKRIYSDRTPITELPSSFE 583
             L  +  SF     L  L L  C +LE  P  +    ++ L  I   R  + ELP + E
Sbjct: 774 SSLVELP-SFGNATKLEELYLENCSSLEKLPPSINANNLQQLSLINCSR--VVELP-AIE 829

Query: 584 NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSH 642
           N   L+ L + +CS L  LP +IG+   L  + ++  S++ +LPSS+     L+  D S+
Sbjct: 830 NATNLQKLDLGNCSSLIELPLSIGTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSN 889

Query: 643 CKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAI-- 699
           C  L   P            ++I+             L  L+ L L+G +  +S P I  
Sbjct: 890 CSNLVELP------------ININ-------------LKFLDTLNLAGCSQLKSFPEIST 924

Query: 700 ------IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
                  ++MS+LR + + + N L SLP+LP  L YL+  +CK L+ L
Sbjct: 925 KIFTDCYQRMSRLRDLRINNCNNLVSLPQLPDSLAYLYADNCKSLERL 972



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 136/554 (24%), Positives = 228/554 (41%), Gaps = 129/554 (23%)

Query: 494  VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
            +  L++  S + ++    + L +L+ +DL   + LK +  +     +L  L L  C +L 
Sbjct: 695  LVELHMSFSKLRKLWEGTKQLRNLKWMDLSNSEDLKELP-NLSTATNLEELKLRDCSSLV 753

Query: 554  HFPEILEKMEHLKRIYSDR-TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
              P  +EK+  L+R+Y  R + + ELPS F N   LE L++E+CS L+ LP +I +    
Sbjct: 754  ELPSSIEKLTSLQRLYLQRCSSLVELPS-FGNATKLEELYLENCSSLEKLPPSINANNLQ 812

Query: 613  YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
               L   S + +LP+    +N L+ LD  +C  L                         E
Sbjct: 813  QLSLINCSRVVELPAIENATN-LQKLDLGNCSSL------------------------IE 847

Query: 673  IPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
            +P  I   ++L+ L +SG ++   LP+ I  ++ L+   L + + L  LP + + LK+L 
Sbjct: 848  LPLSIGTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELP-ININLKFL- 905

Query: 732  LIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPL-----CLQY------LNLEDCNML 780
                             ++L+L GC+ L+S PE+       C Q       L + +CN L
Sbjct: 906  -----------------DTLNLAGCSQLKSFPEISTKIFTDCYQRMSRLRDLRINNCNNL 948

Query: 781  RSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAA 840
             SLP+LP  L  L   NC  L+ L     C                      PE      
Sbjct: 949  VSLPQLPDSLAYLYADNCKSLERLD---CCFNN-------------------PE------ 980

Query: 841  ICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGS 900
            I   F  C KLN +A + I+                  +   IN            LPG+
Sbjct: 981  ISLNFPKCFKLNQEARDLIM------------------HTTCINA----------TLPGT 1012

Query: 901  EIPDWFSNQ-SSGSSICIQLPPHSSCRNLIGFAFCAVL--DSKKVDSDCFRYFYVSFQFD 957
            ++P  F+++ +SG S+ I+L   SS    + F  C +L   ++++ SD     +   + D
Sbjct: 1013 QVPACFNHRATSGDSLKIKL-KESSLPTTLRFKACIMLVKVNEEMSSDLKSMIFDPMRVD 1071

Query: 958  LEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAE-- 1015
            + I+       V    +  +I   I S   I  F+  L V   +    T   F+F  +  
Sbjct: 1072 IVIRDEQNDLKVQCTPSYHFINYFIISTEHIYTFE--LEV---EEVTSTELVFEFILDKE 1126

Query: 1016 ---RKFYKIKRCGL 1026
               ++ +KI  CG+
Sbjct: 1127 SNWKRNWKIGECGI 1140


>gi|297789019|ref|XP_002862524.1| hypothetical protein ARALYDRAFT_333306 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308097|gb|EFH38782.1| hypothetical protein ARALYDRAFT_333306 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1091

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 185/630 (29%), Positives = 305/630 (48%), Gaps = 80/630 (12%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           + +  + VGI GM GIGKT LA  +F +   +   + F+  VR   +T     +L+K+++
Sbjct: 205 NENKTRYVGIVGMAGIGKTYLADKLFQKLKTKIGCNVFLKLVR--EKTTDEDLYLEKRLV 262

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
              L++ +  +  N     K  + + K+++VLD+V++  +++  +G  +   +GS IV+T
Sbjct: 263 EGLLNKTINFSSKNPLEERKNDLIQKKVVVVLDNVSDQKEIEPFLGICNWIKEGSIIVIT 322

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFA--FKENHCPEDLNWHSRSVVSYTK 180
           TRDK +L   +G    IY V  +   E+ E F + A      +  E+    S+  V Y  
Sbjct: 323 TRDKSLL---KGMNCDIYEVPKMNDRESLELFKDRAQVCSSTNFEENFMELSKKFVDYAG 379

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           GNPL L+ +G  L  K K HW + L  L +    ++    + L+ S+++L  + K +FLD
Sbjct: 380 GNPLALKNIGKELYAKEKDHWEERLRTLTQCSNPKVR---EKLRSSYDELNEQQKDVFLD 436

Query: 241 IACFFEGEDKDFVASILD-------DSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQ 293
           IA FF  ED  +V S+LD       ++  +++  L+DK L+S+    + MH++L  M ++
Sbjct: 437 IAHFFRSEDVKYVTSLLDSFDPGSAEAGKELIKGLVDKFLISVCDGRVEMHNLLLTMAKE 496

Query: 294 IVRQESEKEPGKRSRLWDP--KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
            V      +   +  LW    +E +  L + +G D + GI +D+S ++ + LD +AF  M
Sbjct: 497 HV-----GDTAGKYWLWSSNCEEFTSALSNIEGKDKVRGIIIDMSNVEEMPLDNQAFVGM 551

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKK--LRYLHWDTYPLRT 409
           S+LR  K                T    +  K+ LP+ L++ PK   +RYL+W  +P + 
Sbjct: 552 SSLRYLKV-------------CDTGHSEAQCKLNLPDVLEF-PKDNIVRYLNWVKFPGKE 597

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEKAC------------------------------ 439
           LPS+F+P NL++L L  SK+   W+  K                                
Sbjct: 598 LPSDFEPTNLIDLRLPYSKITSVWKDAKVAPELRWVDLSHSSNLSSLLGLSEAPKLLRLN 657

Query: 440 ---------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
                    +P  +Q  K L +L+ +GC SL S P  +      T+  S C     F  I
Sbjct: 658 LEGCTSLKELPEEMQKMKKLVSLNLRGCTSLLSLPK-ITMDSLKTLILSCCSKFQTFEVI 716

Query: 491 SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
           S  +  LYL  +AI+E+P +I  L  L  LDL+ CK L  +     K++SL  L L GC 
Sbjct: 717 SKHLETLYLNNTAIDELPPTIGNLHGLIFLDLKDCKNLATLPDCLWKMKSLQELKLSGCS 776

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPS 580
            L+ FP + E M +L+ +  D T I  +PS
Sbjct: 777 KLKSFPNVKETMVNLRILLLDGTSIPLMPS 806



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 171/380 (45%), Gaps = 48/380 (12%)

Query: 616  LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
            L   +++ +LP  +     L SL+   C  L S P+  +  L  + L   S +   E+  
Sbjct: 658  LEGCTSLKELPEEMQKMKKLVSLNLRGCTSLLSLPKITMDSLKTLILSCCSKFQTFEVIS 717

Query: 676  EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH---L 732
            +      LE LYL+    + LP  I  +  L F+ L+D   L +LP+    +K L    L
Sbjct: 718  K-----HLETLYLNNTAIDELPPTIGNLHGLIFLDLKDCKNLATLPDCLWKMKSLQELKL 772

Query: 733  IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP-----------LCLQYLNLEDCNMLR 781
              C  L+S P +   + +L +   +   S+P +P           LCL   N E C++L 
Sbjct: 773  SGCSKLKSFPNVKETMVNLRILLLDG-TSIPLMPSKIFDSSFLRRLCLSR-NEEICSLLF 830

Query: 782  SLPELPLCLQLLTVRNCNRLQSLPEI---LLCLQELDASVLEKLSKHSPDLQWAP-ESLK 837
             + +L   L+ L ++ C  L SLP++   LLCL     S L  ++  SP     P E + 
Sbjct: 831  DMSQL-FHLKWLELKYCKNLTSLPKLPPNLLCLNAHGCSSLRTVA--SPLASLMPTEQIH 887

Query: 838  SAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVL 897
            S    F  T+C KL   + + I+  S ++ +   +++ R   +         L G+    
Sbjct: 888  ST---FILTDCHKLEQVSKSAII--SYIQKKSQLMSNDRHSQDFV----FKSLIGT--CF 936

Query: 898  PGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFD 957
            PG ++P WF++Q+ GS + ++LP   +   L G   C V+  K+     ++    S Q  
Sbjct: 937  PGCDVPVWFNHQALGSVLKLELPRDGNEGRLSGIFLCVVVSFKE-----YKAQNNSLQ-- 989

Query: 958  LEIKTLSETKHVDLGYNSRY 977
             E+ T+  + HV +GY++ +
Sbjct: 990  -ELHTVV-SDHVFIGYSTLF 1007


>gi|10177890|dbj|BAB11222.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1251

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 197/709 (27%), Positives = 332/709 (46%), Gaps = 116/709 (16%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ +GIWGM GIGKTTLAKA+F+  S +++ SCF+ +    +    GL  L K+ +   L
Sbjct: 202 IRSIGIWGMPGIGKTTLAKAVFNHMSTDYDASCFIENF-DEAFHKEGLHRLLKERIGKIL 260

Query: 67  SEKLEVAGPNI--PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            ++ ++    I  P   ++++   ++L+VLDDV +    +  +  LD FG GS I++T+ 
Sbjct: 261 KDEFDIESSYIMRPTLHRDKLYDKRILVVLDDVRDSLAAESFLKRLDWFGSGSLIIITSV 320

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           DK+V      +  +IY V GL   EA + F    F  N   ++    S  V+ Y  GNPL
Sbjct: 321 DKQVFA--FCQINQIYTVQGLNVHEALQLFSQSVFGINEPEQNDRKLSMKVIDYVNGNPL 378

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L + G  L + +KS       +L      +I    D+LK +++ L+   K+I LDIA F
Sbjct: 379 ALSIYGREL-MGKKSEMETAFFELKHCPPLKIQ---DVLKNAYSALSDNEKNIVLDIAFF 434

Query: 245 FEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F+GE  ++V  +L++S       +D+L+DK +++IS N + M++++Q+  ++I   E E 
Sbjct: 435 FKGETVNYVMQLLEESHYFPRLAIDVLVDKCVLTISENTVQMNNLIQDTCQEIFNGEIE- 493

Query: 302 EPGKRSRLWDPKEISRVLKHNK---------------GTDAIEGIFLDLSKIKGINLDPR 346
                +R+W+P  I  +L++++                 + IE IFLD S +K  ++   
Sbjct: 494 ---TCTRMWEPSRIRYLLEYDELEGSGETKAMPKSGLVAEHIESIFLDTSNVK-FDVKHD 549

Query: 347 AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
           AF NM NL+  K Y      I              S +  P GLD LP +LR LHW+ YP
Sbjct: 550 AFKNMFNLKFLKIYNSCSKYI--------------SGLNFPKGLDSLPYELRLLHWENYP 595

Query: 407 LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACV-------PSSIQ--------NFKYLS 451
           L++LP +F   +LV+L++  S++ +     K  V         S+Q          + + 
Sbjct: 596 LQSLPQDFDFGHLVKLSMPYSQLHKLGTRVKDLVMLKRLILSHSLQLVECDILIYAQNIE 655

Query: 452 ALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVP--- 508
            +  +GC  L+ FP          +N S C  +  F  +   +  L+L  + I E+P   
Sbjct: 656 LIDLQGCTGLQRFPDTSQLQNLRVVNLSGCTEIKCFSGVPPNIEELHLQGTRIREIPIFN 715

Query: 509 ---------------SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
                          + +E  +D+E +DL     L  ++++   +  LV L +  C NL 
Sbjct: 716 ATHPPKVKLDRKKLWNLLENFSDVEHIDLECVTNLATVTSNNHVMGKLVCLNMKYCSNLR 775

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
             P+++                        +L  L+VL++  CS+L+ +     +L+ LY
Sbjct: 776 GLPDMV------------------------SLESLKVLYLSGCSELEKIMGFPRNLKKLY 811

Query: 614 YILAAASAISQLPSSVALSNMLRSLDSSHCKGL-------ESFPRTFLL 655
                 +AI +LP    L N L  L++  CK L       E  PR F+ 
Sbjct: 812 ---VGGTAIRELPQ---LPNSLEFLNAHGCKHLKSINLDFEQLPRHFIF 854



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 119/295 (40%), Gaps = 51/295 (17%)

Query: 554 HFPEILEKMEH-LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           +FP+ L+ + + L+ ++ +  P+  LP  F+   G  V      S+L  L   +  L  L
Sbjct: 574 NFPKGLDSLPYELRLLHWENYPLQSLPQDFDF--GHLVKLSMPYSQLHKLGTRVKDLVML 631

Query: 613 YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL-GLSAMGL--------- 662
             ++ + S        +  +  +  +D   C GL+ FP T  L  L  + L         
Sbjct: 632 KRLILSHSLQLVECDILIYAQNIELIDLQGCTGLQRFPDTSQLQNLRVVNLSGCTEIKCF 691

Query: 663 ---------LHISDYAVREIP------------------QEIAYLSSLEILYLS-GNNFE 694
                    LH+    +REIP                    +   S +E + L    N  
Sbjct: 692 SGVPPNIEELHLQGTRIREIPIFNATHPPKVKLDRKKLWNLLENFSDVEHIDLECVTNLA 751

Query: 695 SLPAIIKQMSQLRFIHLEDFNMLQSLPELPL--CLKYLHLIDCKMLQSLPVLPFCLESLD 752
           ++ +    M +L  ++++  + L+ LP++     LK L+L  C  L+ +   P  L+ L 
Sbjct: 752 TVTSNNHVMGKLVCLNMKYCSNLRGLPDMVSLESLKVLYLSGCSELEKIMGFPRNLKKL- 810

Query: 753 LTGCNMLRSLPELPLCLQYLNLEDCNMLRSL----PELPLCLQLLTVRNCNRLQS 803
             G   +R LP+LP  L++LN   C  L+S+     +LP   +     NC R  S
Sbjct: 811 YVGGTAIRELPQLPNSLEFLNAHGCKHLKSINLDFEQLP---RHFIFSNCYRFSS 862


>gi|109676360|gb|ABG37662.1| NBS-LRR type disease resistance-like protein [Populus trichocarpa]
          Length = 1138

 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 171/490 (34%), Positives = 253/490 (51%), Gaps = 64/490 (13%)

Query: 158 AFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIH 217
           AFK +   ED    S+ VV Y  G PL LEV+GS L  +    W   ++ ++ I + +I 
Sbjct: 3   AFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFLYGRSIPEWRGAINRMHEIPDCKI- 61

Query: 218 DIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLV 274
              D+L+ISF+ L    + IFLDIACF +G  KD +  ILD    +    + +LI++SL+
Sbjct: 62  --MDVLRISFDGLHESDQKIFLDIACFLKGFKKDRITRILDSCGFNAGIGIPVLIERSLI 119

Query: 275 SISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLD 334
           S+ G+ + MH++LQ MG++IVR E  KEPGKRSRLW  +++S  L  N G + IE IFLD
Sbjct: 120 SVYGDQVWMHNLLQIMGKEIVRCEDPKEPGKRSRLWTYEDVSLALMDNTGKEKIEAIFLD 179

Query: 335 LSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLP 394
           +  IK    + +AF+ MS LRL K                         VQL  G + L 
Sbjct: 180 MPGIKEAQWNMKAFSKMSRLRLLKI----------------------DNVQLSEGPEDLS 217

Query: 395 KKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALS 454
           K+LR+L W +YP ++LP+  +   LVEL++  S +EQ W G K+ V     N K      
Sbjct: 218 KELRFLEWHSYPSKSLPAGLQVDGLVELHMANSSIEQLWYGCKSAV-----NLK------ 266

Query: 455 FKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG--KVTRLYL-GQSAIEEVPSSI 511
                                IN S  +NL + P ++G   ++ L L G +++ EV  S+
Sbjct: 267 --------------------VINLSNSLNLSKTPDLTGIPNLSSLILEGCTSLSEVHPSL 306

Query: 512 ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSD 571
               +L+ ++L  CK   RI  S  ++ SL    L GC  LE FP+I+  M  L  +  D
Sbjct: 307 GRHKNLQYVNLVNCKSF-RILPSNLEMESLKVFTLDGCTKLEKFPDIVGNMNCLMELCLD 365

Query: 572 RTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVA 630
            T I EL SS  +L GLEVL + +C  L+++P +IG L+ L  + L+  S +  +P ++ 
Sbjct: 366 GTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIPENLG 425

Query: 631 LSNMLRSLDS 640
               L   D 
Sbjct: 426 KVESLEEFDG 435



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 143/302 (47%), Gaps = 54/302 (17%)

Query: 657 LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNF--ESLPAIIKQMSQLRFIHLEDF 714
           +S + LL I +  + E P+++    S E+ +L  +++  +SLPA + Q+  L  +H+ + 
Sbjct: 196 MSRLRLLKIDNVQLSEGPEDL----SKELRFLEWHSYPSKSLPAGL-QVDGLVELHMANS 250

Query: 715 NMLQSLP--ELPLCLKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSL-PELPL-- 767
           ++ Q     +  + LK ++L +   L   P L     L SL L GC  L  + P L    
Sbjct: 251 SIEQLWYGCKSAVNLKVINLSNSLNLSKTPDLTGIPNLSSLILEGCTSLSEVHPSLGRHK 310

Query: 768 CLQYLNLEDCNMLRSLP-ELPL-CLQLLTVRNCNRLQSLPEI---LLCLQEL--DASVLE 820
            LQY+NL +C   R LP  L +  L++ T+  C +L+  P+I   + CL EL  D + + 
Sbjct: 311 NLQYVNLVNCKSFRILPSNLEMESLKVFTLDGCTKLEKFPDIVGNMNCLMELCLDGTGIA 370

Query: 821 KLSK---HSPDLQWAP-------ESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHM 870
           +LS    H   L+          ES+ S+  C +    L L+G +  K + ++L ++  +
Sbjct: 371 ELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIPENLGKVESL 430

Query: 871 ----AIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQ-----SSGSSICIQLPP 921
                +++ R G+ +A               PG+EIP WF+++       GS   I+L  
Sbjct: 431 EEFDGLSNPRPGFGIA--------------FPGNEIPGWFNHRKLKEWQHGSFSNIELSF 476

Query: 922 HS 923
           HS
Sbjct: 477 HS 478



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 64/305 (20%), Positives = 123/305 (40%), Gaps = 51/305 (16%)

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLE-----VLDLRGCKRLKRISTSFCKLRS 540
           E P+  GK +RL+      E+V  ++   T  E      LD+ G K  +    +F K+ S
Sbjct: 143 EDPKEPGKRSRLW----TYEDVSLALMDNTGKEKIEAIFLDMPGIKEAQWNMKAFSKM-S 197

Query: 541 LVTLILLGCLNLEHFPEILEK--------------------MEHLKRIYSDRTPITELPS 580
            + L+ +  + L   PE L K                    ++ L  ++   + I +L  
Sbjct: 198 RLRLLKIDNVQLSEGPEDLSKELRFLEWHSYPSKSLPAGLQVDGLVELHMANSSIEQLWY 257

Query: 581 SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS 640
             ++   L+V+ + +   L   PD  G       IL   +++S++  S+     L+ ++ 
Sbjct: 258 GCKSAVNLKVINLSNSLNLSKTPDLTGIPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNL 317

Query: 641 SHCKGLESFPRTFLLGLSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSGNNFESLPAI 699
            +CK     P    L + ++ +  +     + + P  +  ++ L  L L G     L + 
Sbjct: 318 VNCKSFRILPSN--LEMESLKVFTLDGCTKLEKFPDIVGNMNCLMELCLDGTGIAELSSS 375

Query: 700 IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNML 759
           I  +  L  + + +   L+S+P    CLK                   L+ LDL+GC+ L
Sbjct: 376 IHHLIGLEVLSMNNCKNLESIPSSIGCLK------------------SLKKLDLSGCSEL 417

Query: 760 RSLPE 764
           +++PE
Sbjct: 418 KNIPE 422


>gi|357486227|ref|XP_003613401.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355514736|gb|AES96359.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 976

 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 207/645 (32%), Positives = 321/645 (49%), Gaps = 75/645 (11%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V +VGIWGMGGIGK+T+AK +++   +EFE   F++++R   E   G   LQ+Q+LS  L
Sbjct: 60  VCLVGIWGMGGIGKSTIAKVVYNNLCYEFEDQSFLANIRQVWEKERGQIDLQEQLLSDIL 119

Query: 67  SEKLEVAGPNI---PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
             +  V   N+        ER+   + L++LDDV+   QL  L G  +  G GS I++TT
Sbjct: 120 KTR-NVKVHNVEWGKAMINERLCTKRALVILDDVSTREQLNALCGNRNGIGPGSIIIITT 178

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           RD R+L+    +   IY   GL   E+   F   AFKE +  E     S  VVSY  G P
Sbjct: 179 RDARLLDILGVD--FIYEAEGLNVHESRRLFNWHAFKEANPSEAFLILSGDVVSYCGGLP 236

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFLDIA 242
           L LEVLGS L  +RK  W  V+  L +I   +IH+    LKISF+ L   + K+IFLD+ 
Sbjct: 237 LALEVLGSYLFNRRKREWQSVISKLQKIPNDQIHEK---LKISFDGLEDHMEKNIFLDVC 293

Query: 243 CFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQE 298
           CFF G+D+ +V  IL+     +D+ +++LI++SL+ +   N L MH +L++MGR+IVR+ 
Sbjct: 294 CFFIGKDRAYVTEILNGCGLHADIGIEVLIERSLLKVEKNNKLGMHALLRDMGREIVRES 353

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
           S +EP KR+RLW  +++  VL    GT AIEG+ L   +   +  +  A           
Sbjct: 354 SPEEPEKRTRLWCFEDVVDVLAEQTGTKAIEGLVLKSQRTSRVCFNTIALK--------- 404

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
                         M     L    VQ+    +   K+LR+L W  +PL+ +P NF  KN
Sbjct: 405 -------------KMKKLRLLQLDNVQVIGDYECFSKQLRWLSWQGFPLKYMPENFYQKN 451

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
           +V ++L+ S + Q W+      P  I+  K L+       + L+  P           +F
Sbjct: 452 VVAMDLKHSNLTQVWKK-----PQLIEGLKILN---LSHSKYLKRTP-----------DF 492

Query: 479 SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
           S   NL +          +     ++ EV  SI  L +L +++L+ C  L  +     +L
Sbjct: 493 SKLPNLEKL---------IMKDCQSLLEVHPSIGDLNNLLLINLKDCTSLSNLPREIYQL 543

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS- 597
           R++ TLIL GC  ++   E + +ME LK + +  T + ++P  F  +    + ++  C  
Sbjct: 544 RTVKTLILSGCSKIDKLDEDILQMESLKTLMAANTRVKQVP--FSIVRSKSIGYISLCGY 601

Query: 598 ---KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
                D  P  I S     +I  A +++  +P    +S  L SLD
Sbjct: 602 KGLSHDVFPSLIRS-----WISPAMNSLPCIPPFGGMSKSLASLD 641



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 14/225 (6%)

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL- 552
           V  + L  S + +V    + +  L++L+L   K LKR +  F KL +L  LI+  C +L 
Sbjct: 452 VVAMDLKHSNLTQVWKKPQLIEGLKILNLSHSKYLKR-TPDFSKLPNLEKLIMKDCQSLL 510

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           E  P I +    L     D T ++ LP     L  ++ L +  CSK+D L ++I  +E L
Sbjct: 511 EVHPSIGDLNNLLLINLKDCTSLSNLPREIYQLRTVKTLILSGCSKIDKLDEDILQMESL 570

Query: 613 YYILAAASAISQLPSSVALSNMLRSLDSSHCKGL--ESFPRTFLLGLS-AMGLLHISDYA 669
             ++AA + + Q+P S+  S  +  +     KGL  + FP      +S AM  L      
Sbjct: 571 KTLMAANTRVKQVPFSIVRSKSIGYISLCGYKGLSHDVFPSLIRSWISPAMNSLPC---- 626

Query: 670 VREIPQEIAYLSSLEILYLSGNNFE--SLPAIIKQMSQLRFIHLE 712
              IP       SL  L +  NN +  S   I+   S+LR + ++
Sbjct: 627 ---IPPFGGMSKSLASLDIESNNLDLVSQSQILNSCSRLRSVSVQ 668


>gi|224284598|gb|ACN40032.1| unknown [Picea sitchensis]
          Length = 1071

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 238/809 (29%), Positives = 384/809 (47%), Gaps = 96/809 (11%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
            KTTLAK I+++    ++  C + DVR ++     L  LQ ++L        ++   +   
Sbjct: 263  KTTLAKKIYNREKSNYKRICLLRDVRSSN-----LHSLQSRLLKELNQSSAQINDID-EG 316

Query: 80   FTKERVRRMKLLIVLDDVNEVGQLKRLIGEL-DQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K +    + LIVLDDV+++ QL  L   L D     S I+VT+R+K VL      E  
Sbjct: 317  IEKLKTYSERALIVLDDVDDISQLDALFASLKDTIHVDSLILVTSRNKDVLTSSGITESS 376

Query: 139  IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            IYR+ GL  + + E FC  AF + H            +    G PL L+VLG+ L  K  
Sbjct: 377  IYRLKGLNRKHSQELFCFHAFGQPHPVVGFEEVVEKFLDVCDGLPLSLKVLGALLHGKDL 436

Query: 199  SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             +W + L   + I   ++      L+ISF+ L  + K +FLDIACFF GE++D +  I D
Sbjct: 437  WYWKEQLGKTSTILPRKVR---STLEISFDALDKQEKEVFLDIACFFIGENRDTI-RIWD 492

Query: 259  DSESDVLDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISR 317
               +  L+ L ++ LV + S N L MHD L+++GR +   E+ + P    R+W       
Sbjct: 493  GWLN--LENLKNRCLVEVDSENCLRMHDHLRDLGRDLA--ENSEYP---RRIW------- 538

Query: 318  VLKHNKGTDAIEGIFLDLSKIKGINLDPRAFT----NMSNLRLFKFYVPKFYEIEKLPSM 373
                 + TD++     D S ++GI++  R  +    N+SN +L K    + + +E++   
Sbjct: 539  -----RMTDSLLHNVSDQSPVRGISMVHRNGSERSCNLSNCKLLK---AESHFVEQV--- 587

Query: 374  STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
                        L NG   LP  L YL W+ YP  +LP +    NL  L+++  +++  W
Sbjct: 588  ------------LSNG-QLLP--LIYLRWENYPKSSLPPSLPSMNLRVLHIQGKQLKTLW 632

Query: 434  EGEKAC---------------VPSSIQNFKYLSALS-FKGCQSLRSFPSNL-HFVCPVTI 476
            + E                  VP SI   KYL  +  + G  +L   P ++ H     T+
Sbjct: 633  QHESQAPLQLRELYVNAPLSKVPESIGTLKYLEKIVLYNGSMTL--LPDSVGHLTGLQTL 690

Query: 477  NFSYCVNLIEFPQISGKVT---RLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
            +   C  L   P   G +T   +L L   S ++ +P S+  LT L+ L L  C  L+ + 
Sbjct: 691  DLIGCSTLQMLPDSVGNLTGLQKLDLSWCSTLQMLPDSVGNLTGLQTLALGWCSTLQTLP 750

Query: 533  TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDR-TPITELPSSFENLPGLEVL 591
             S   L  L TL L+ C  L+  P+ +  +  L+ +Y  R + +  LP S  NL GL+ L
Sbjct: 751  DSVGNLTGLQTLDLIECSTLQTLPDSVGNLTGLQTLYLSRCSTLQTLPDSVGNLTGLQTL 810

Query: 592  FVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
            ++  CS L  LPD++G+L  L  + L+  S +  LP SV     L++L+   C  L++ P
Sbjct: 811  YLSGCSTLQTLPDSVGNLTGLQTLYLSGCSTLQTLPDSVGNLTGLQTLNLDRCSTLQTLP 870

Query: 651  RTFLLGLSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRF 708
               +  L ++  L +     ++ +P  +  L+ L+ L LSG +  ++LP     ++ L+ 
Sbjct: 871  -DLVGNLKSLQTLDLDGCSTLQTLPDSVGNLTGLQTLNLSGCSTLQTLPDSFGNLTGLQT 929

Query: 709  IHLEDFNMLQSLPEL---PLCLKYLHLIDCKMLQSLPVLPFCLESLD---LTGCNMLRSL 762
            ++L   + LQ+LP+       L+ L+LI C  LQ+LP     L  L    L GC  L++L
Sbjct: 930  LNLIGCSTLQTLPDSFGNLTGLQTLNLIGCSTLQTLPDSVGNLTGLQILYLGGCFTLQTL 989

Query: 763  PELP------LCLQYLNLEDCNMLRSLPE 785
              LP        LQ L L+  + L+ LP+
Sbjct: 990  QTLPDLVGTLTGLQTLYLDGYSTLQMLPD 1018



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 139/266 (52%), Gaps = 32/266 (12%)

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
           L   PE +  +++L++I      +T LP S  +L GL+ L +  CS L  LPD++G+L  
Sbjct: 651 LSKVPESIGTLKYLEKIVLYNGSMTLLPDSVGHLTGLQTLDLIGCSTLQMLPDSVGNLTG 710

Query: 612 LYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDY 668
           L  + L+  S +  LP SV     L++L    C  L++ P +   L GL  + L+  S  
Sbjct: 711 LQKLDLSWCSTLQMLPDSVGNLTGLQTLALGWCSTLQTLPDSVGNLTGLQTLDLIECS-- 768

Query: 669 AVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP--- 724
            ++ +P  +  L+ L+ LYLS  +  ++LP  +  ++ L+ ++L   + LQ+LP+     
Sbjct: 769 TLQTLPDSVGNLTGLQTLYLSRCSTLQTLPDSVGNLTGLQTLYLSGCSTLQTLPDSVGNL 828

Query: 725 LCLKYLHLIDCKMLQSLPVLPFCLESL-DLTGCNMLRSLPELPLCLQYLNLEDCNMLRSL 783
             L+ L+L  C  LQ+LP      +S+ +LTG             LQ LNL+ C+ L++L
Sbjct: 829 TGLQTLYLSGCSTLQTLP------DSVGNLTG-------------LQTLNLDRCSTLQTL 869

Query: 784 PELP---LCLQLLTVRNCNRLQSLPE 806
           P+L      LQ L +  C+ LQ+LP+
Sbjct: 870 PDLVGNLKSLQTLDLDGCSTLQTLPD 895



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 17/221 (7%)

Query: 440  VPSSIQNFKYLSALSFKGCQSLRSFP---SNLHFVCPVTINFSYCVNLIEFPQISGKVTR 496
            +P S+ N   L  L+   C +L++ P    NL  +   T++   C  L   P   G +T 
Sbjct: 845  LPDSVGNLTGLQTLNLDRCSTLQTLPDLVGNLKSL--QTLDLDGCSTLQTLPDSVGNLTG 902

Query: 497  LYL----GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
            L      G S ++ +P S   LT L+ L+L GC  L+ +  SF  L  L TL L+GC  L
Sbjct: 903  LQTLNLSGCSTLQTLPDSFGNLTGLQTLNLIGCSTLQTLPDSFGNLTGLQTLNLIGCSTL 962

Query: 553  EHFPEILEKMEHLKRIYSDR----TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGS 608
            +  P+ +  +  L+ +Y         +  LP     L GL+ L+++  S L  LPD+I +
Sbjct: 963  QTLPDSVGNLTGLQILYLGGCFTLQTLQTLPDLVGTLTGLQTLYLDGYSTLQMLPDSIWN 1022

Query: 609  LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            L  L  +  A + + +  S V     L  L + H  GL++ 
Sbjct: 1023 LMGLKRLTLAGATLCR-RSQVG---NLTGLQTLHLTGLQTL 1059



 Score = 40.8 bits (94), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 25/201 (12%)

Query: 636 RSLDSSHCKGLES---FPRTFLLGLSAMGLLHI--SDYAVREIPQEIAYLSSLEILYLSG 690
           RS + S+CK L++   F    L     + L+++   +Y    +P  +  ++ L +L++ G
Sbjct: 567 RSCNLSNCKLLKAESHFVEQVLSNGQLLPLIYLRWENYPKSSLPPSLPSMN-LRVLHIQG 625

Query: 691 NNFESLPAIIKQMS-QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP---- 745
              ++L     Q   QLR +++     L  +PE    LKYL  I      S+ +LP    
Sbjct: 626 KQLKTLWQHESQAPLQLRELYVN--APLSKVPESIGTLKYLEKI-VLYNGSMTLLPDSVG 682

Query: 746 --FCLESLDLTGCNMLRSLPELP---LCLQYLNLEDCNMLRSLPELP---LCLQLLTVRN 797
               L++LDL GC+ L+ LP+       LQ L+L  C+ L+ LP+       LQ L +  
Sbjct: 683 HLTGLQTLDLIGCSTLQMLPDSVGNLTGLQKLDLSWCSTLQMLPDSVGNLTGLQTLALGW 742

Query: 798 CNRLQSLPEI---LLCLQELD 815
           C+ LQ+LP+    L  LQ LD
Sbjct: 743 CSTLQTLPDSVGNLTGLQTLD 763


>gi|145332743|ref|NP_001078237.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|145339123|ref|NP_190053.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644407|gb|AEE77928.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644408|gb|AEE77929.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1219

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 238/768 (30%), Positives = 371/768 (48%), Gaps = 113/768 (14%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG------NSETAGGLEHLQ 58
           D V+++GIWG  GIGKTT+A+ +F+Q S  F+ S  + ++RG        E +  L+ LQ
Sbjct: 287 DEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIIVNIRGIYPRPCFDEYSAQLQ-LQ 345

Query: 59  KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            QMLS  ++ K       I H    +ER+R  K+ +VLD+V+++GQL  L  E   FG G
Sbjct: 346 NQMLSQMINHK----DIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPG 401

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++TT D  VL K  G    +Y+V     +EAF+ FC  AF +    E  +  +  V+
Sbjct: 402 SRIIITTEDLGVL-KAHG-INHVYKVKYPSNDEAFQIFCMNAFGQKQPHEGFDEIAWEVM 459

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           +     PL L+VLGS+L  K K  W + L    R+  S   +I  I++ S++ L    K 
Sbjct: 460 ALAGELPLGLKVLGSALRGKSKPEWERTLP---RLKTSLDGNIGSIIQFSYDGLCDEDKY 516

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS-----GNFLNMHDILQ 288
           + L IAC F  E    V  +L +   DV   L +L  KSL+SI      G+ +NMH +L+
Sbjct: 517 LLLYIACLFNYESTTKVEEVLANKFLDVKQGLHVLAQKSLISIDENSLYGDTINMHTLLR 576

Query: 289 EMGRQIVRQESEKEP-GKRSRLWDPKEISRVLKHNK-GTDAIEGIFLDLSKIKG-INLDP 345
           + GR+  R++       KR  L   ++I  VL  +   +    GI  DL   +  +N+  
Sbjct: 577 QFGRETSRKQFVYHGFTKRQLLVGERDICEVLSDDTIDSRRFIGITFDLFGTQDYLNISE 636

Query: 346 RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
           +A   M++           +E  ++ ++   E+L   ++ L + + + P K+R L W +Y
Sbjct: 637 KALERMND-----------FEFVRINALIPTERL---QLALQDLICHSP-KIRSLKWYSY 681

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
               LPS F P+ LVEL++  SK+ + WEG K      ++N K+   +     + L+  P
Sbjct: 682 QNICLPSTFNPEFLVELHMSFSKLRKLWEGTK-----QLRNLKW---MDLSNSEDLKELP 733

Query: 466 SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
                      N S   NL E               S++ E+PSSIE LT L+ L L+ C
Sbjct: 734 -----------NLSTATNLEELK---------LRDCSSLVELPSSIEKLTSLQRLYLQRC 773

Query: 526 KRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL--EKMEHLKRIYSDRTPITELPSSFE 583
             L  +  SF     L  L L  C +LE  P  +    ++ L  I   R  + ELP + E
Sbjct: 774 SSLVELP-SFGNATKLEELYLENCSSLEKLPPSINANNLQQLSLINCSR--VVELP-AIE 829

Query: 584 NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSH 642
           N   L+ L + +CS L  LP +IG+   L  + ++  S++ +LPSS+     L+  D S+
Sbjct: 830 NATNLQKLDLGNCSSLIELPLSIGTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSN 889

Query: 643 CKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAI-- 699
           C  L   P            ++I+             L  L+ L L+G +  +S P I  
Sbjct: 890 CSNLVELP------------ININ-------------LKFLDTLNLAGCSQLKSFPEIST 924

Query: 700 ------IKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
                  ++MS+LR + + + N L SLP+LP  L YL+  +CK L+ L
Sbjct: 925 KIFTDCYQRMSRLRDLRINNCNNLVSLPQLPDSLAYLYADNCKSLERL 972



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 136/554 (24%), Positives = 228/554 (41%), Gaps = 129/554 (23%)

Query: 494  VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
            +  L++  S + ++    + L +L+ +DL   + LK +  +     +L  L L  C +L 
Sbjct: 695  LVELHMSFSKLRKLWEGTKQLRNLKWMDLSNSEDLKELP-NLSTATNLEELKLRDCSSLV 753

Query: 554  HFPEILEKMEHLKRIYSDR-TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
              P  +EK+  L+R+Y  R + + ELPS F N   LE L++E+CS L+ LP +I +    
Sbjct: 754  ELPSSIEKLTSLQRLYLQRCSSLVELPS-FGNATKLEELYLENCSSLEKLPPSINANNLQ 812

Query: 613  YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
               L   S + +LP+    +N L+ LD  +C  L                         E
Sbjct: 813  QLSLINCSRVVELPAIENATN-LQKLDLGNCSSL------------------------IE 847

Query: 673  IPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
            +P  I   ++L+ L +SG ++   LP+ I  ++ L+   L + + L  LP + + LK+L 
Sbjct: 848  LPLSIGTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELP-ININLKFL- 905

Query: 732  LIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPL-----CLQY------LNLEDCNML 780
                             ++L+L GC+ L+S PE+       C Q       L + +CN L
Sbjct: 906  -----------------DTLNLAGCSQLKSFPEISTKIFTDCYQRMSRLRDLRINNCNNL 948

Query: 781  RSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAA 840
             SLP+LP  L  L   NC  L+ L     C                      PE      
Sbjct: 949  VSLPQLPDSLAYLYADNCKSLERLD---CCFNN-------------------PE------ 980

Query: 841  ICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGS 900
            I   F  C KLN +A + I+                  +   IN            LPG+
Sbjct: 981  ISLNFPKCFKLNQEARDLIM------------------HTTCINA----------TLPGT 1012

Query: 901  EIPDWFSNQ-SSGSSICIQLPPHSSCRNLIGFAFCAVL--DSKKVDSDCFRYFYVSFQFD 957
            ++P  F+++ +SG S+ I+L   SS    + F  C +L   ++++ SD     +   + D
Sbjct: 1013 QVPACFNHRATSGDSLKIKL-KESSLPTTLRFKACIMLVKVNEEMSSDLKSMIFDPMRVD 1071

Query: 958  LEIKTLSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAE-- 1015
            + I+       V    +  +I   I S   I  F+  L V   +    T   F+F  +  
Sbjct: 1072 IVIRDEQNDLKVQCTPSYHFINYFIISTEHIYTFE--LEV---EEVTSTELVFEFILDKE 1126

Query: 1016 ---RKFYKIKRCGL 1026
               ++ +KI  CG+
Sbjct: 1127 SNWKRNWKIGECGI 1140


>gi|342365826|gb|AEL30360.1| TIR-NBS-LRR-TIR type disease resistance protein [Arachis hypogaea]
          Length = 849

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 234/735 (31%), Positives = 343/735 (46%), Gaps = 104/735 (14%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML-STTLSEKLEVAGPNIP 78
           KTT+A+A+F+     FE +CF++DVR N E    + H+QKQ+L    +S        +  
Sbjct: 38  KTTIARAVFETIRCSFEVTCFLADVRENCEKKD-ITHMQKQLLDQMNISSNAVYNKYDGR 96

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              +  +R  K+L+VLDDVN   QL+ L GE   FG GSRI++TTRD  +L K +  E  
Sbjct: 97  TIIQNSLRLKKVLLVLDDVNHEKQLEDLAGEKAWFGPGSRIIITTRDFHLLRKNKLHE-- 154

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            Y V GL   EA   F   AF      E+    S+ VV Y+ G PL L+VLGS L  +  
Sbjct: 155 TYNVEGLVENEALNLFSLEAFNLPKPSEEFLALSKEVVKYSGGLPLALKVLGSYLNGRGI 214

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             W   +  +     SE   I D+LKIS++ L    K IFLDIACFF+G  K  V  IL 
Sbjct: 215 EVWHSAIEKIKHFSHSE---IIDVLKISYDGLDDMEKDIFLDIACFFKGWQKHHVTEILK 271

Query: 259 DSESDV---LDILIDKSLVSIS----GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
               D    +DILI++SL++I       +L MHD+L+EMG++IV QES+    KRSRLW 
Sbjct: 272 RCGHDAEIGIDILINRSLITIDKYDYDYWLGMHDLLEEMGKRIVIQESQNVVCKRSRLWC 331

Query: 312 PKEISRVLKHNKGTDAIEGIFL-DLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
            +++  VL   K T A  GI L +      +N    +F+ +  L+L         +  K 
Sbjct: 332 LEDVEFVLTQKKKTKATHGIVLHEWYSETEVNQRDLSFSKLCQLKLL------ILDGAKA 385

Query: 371 PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP-SNFKPKNLVELNLRCSKV 429
           P +                   +P  L+   W   P++TLP ++ +   LVE+NL  S++
Sbjct: 386 PILCD-----------------IPCTLKVFCWRRCPMKTLPLTDHQRYELVEINLSKSQI 428

Query: 430 EQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
            + W+G+K      ++N ++L                            S+C  L + P 
Sbjct: 429 AELWDGKKV-----LENLEHLY--------------------------LSWCKQLKQTPD 457

Query: 490 ISG--KVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLIL 546
           +SG   + +L L G   ++ +  S+     L  L+L  CKRL+ +     ++ SL  L L
Sbjct: 458 LSGAPNLKKLNLRGCEELDYIHPSLAHHKRLVELNLEDCKRLETLGDKL-EMSSLEKLDL 516

Query: 547 LGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNI 606
             C +L   PE  E M+ L  +    T I ELP +  NL G+  L +  C K+  L  ++
Sbjct: 517 DSCSSLRRLPEFGECMKKLSILNLRNTGIEELPPTLGNLAGVSELNLSGCDKITGLLLSL 576

Query: 607 GSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHIS 666
           G    L  ++  A     LP                  GLES        L+       S
Sbjct: 577 GCFVGLKKLVLRA-----LPQKT--------------DGLES--------LTVRADYDDS 609

Query: 667 DYAVRE---IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL 723
           D + RE   +  +IA+L+SL  L LS N F  +P  I Q+ +L  + L   + L+ LPEL
Sbjct: 610 DSSSREESTLSYDIAHLASLTYLDLSRNRFLRVPISIHQLPRLTHLKLSFCDELEVLPEL 669

Query: 724 PLCLKYLHLIDCKML 738
           P  L+ L    C  L
Sbjct: 670 PSSLRELDAQGCYSL 684



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 101/484 (20%), Positives = 177/484 (36%), Gaps = 79/484 (16%)

Query: 480 YCVNLIEFPQISGKVTRLYLG--------QSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
           +C+  +EF     K T+   G        ++ + +   S   L  L++L L G K     
Sbjct: 330 WCLEDVEFVLTQKKKTKATHGIVLHEWYSETEVNQRDLSFSKLCQLKLLILDGAK----- 384

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
           +   C +   + +       ++  P    +   L  I   ++ I EL    + L  LE L
Sbjct: 385 APILCDIPCTLKVFCWRRCPMKTLPLTDHQRYELVEINLSKSQIAELWDGKKVLENLEHL 444

Query: 592 FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
           ++  C +L   PD  G+       L     +  +  S+A    L  L+   CK LE+   
Sbjct: 445 YLSWCKQLKQTPDLSGAPNLKKLNLRGCEELDYIHPSLAHHKRLVELNLEDCKRLETLGD 504

Query: 652 TFLLGLSAMGLLHI-SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIH 710
              L +S++  L + S  ++R +P+    +  L IL L     E LP  +  ++ +  ++
Sbjct: 505 K--LEMSSLEKLDLDSCSSLRRLPEFGECMKKLSILNLRNTGIEELPPTLGNLAGVSELN 562

Query: 711 LEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTG------------CNM 758
           L   + +  L     C   L  +   +L++LP     LESL +                +
Sbjct: 563 LSGCDKITGLLLSLGCFVGLKKL---VLRALPQKTDGLESLTVRADYDDSDSSSREESTL 619

Query: 759 LRSLPELPLCLQYLNLEDCNMLR---SLPELPLCLQLLTVRNCNRLQSLPEILLCLQELD 815
              +  L   L YL+L     LR   S+ +LP  L  L +  C+ L+ LPE+   L+ELD
Sbjct: 620 SYDIAHLA-SLTYLDLSRNRFLRVPISIHQLPR-LTHLKLSFCDELEVLPELPSSLRELD 677

Query: 816 ASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASL 875
           A     L K   D       + S   C                                 
Sbjct: 678 AQGCYSLDKSYVD------DVISKTCC--------------------------------- 698

Query: 876 RLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCA 935
             G+  + ++   +    +I   G EIP WF +Q     + +  P +     ++  A C 
Sbjct: 699 --GFAESASQDREDFLQMMIT--GEEIPAWFEHQEEDEGVSVSFPLNCPSTEMVALALCF 754

Query: 936 VLDS 939
           + + 
Sbjct: 755 LFNG 758


>gi|20270890|gb|AAM18462.1|AF440696_1 disease resistance protein RPP4 [Arabidopsis thaliana]
          Length = 1135

 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 248/903 (27%), Positives = 413/903 (45%), Gaps = 157/903 (17%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQK 59
            ++S +   +VGIWG  GIGK+T+ +A+F Q S +F    F++      S+ +G     +K
Sbjct: 201  LESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWEK 260

Query: 60   QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            ++LS  L +K       I HF   ++R++  K+LI+LDDV+ +  LK L+G+ + FG GS
Sbjct: 261  ELLSEILGQK----DIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGS 316

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI+V T+DK++L+    E   +Y V       A +    +AF ++  P+D    +  V  
Sbjct: 317  RIIVITQDKQLLKAH--EIDLVYEVELPSQGLALKMISQYAFGKDSPPDDFKELAFEVAE 374

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                 PL L VLGSSL  + K  W K++  L    + +I +    L++ +++L  + + +
Sbjct: 375  LVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEET---LRVGYDRLNKKNREL 431

Query: 238  FLDIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVR 296
            F  IACFF G     V  +L+D     L +L DKSL+ I+ +  + MH++L+++GR+I R
Sbjct: 432  FKCIACFFNGFKVSNVKELLEDDVG--LTMLADKSLIRITPDGDIEMHNLLEKLGREIDR 489

Query: 297  QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLD----LSKIKGINLDPRAFTNMS 352
             +S+  P KR  L + ++I  V+    GT+ + GI +      S    + ++  +F  M 
Sbjct: 490  AKSKGNPAKRQFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVINEESFKGMR 549

Query: 353  NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            NL        ++ EI             +S++ LP GL YLP KL+ L W+  PL++LPS
Sbjct: 550  NL--------QYLEIGH-----------WSEIDLPQGLVYLPLKLKLLKWNYCPLKSLPS 590

Query: 413  NFKPKNLVELNLRCSKVEQPWEGE------KACVPSSIQNFK---------YLSALSFKG 457
             FK + LV L ++ SK+E+ WEG       K        N K          L  L+   
Sbjct: 591  TFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMDLGCSNNLKEIPDLSLAINLEELNLSK 650

Query: 458  CQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDL 517
            C+SL + PS++     +   +   V LI+   + G     YL         SS+E    L
Sbjct: 651  CESLVTLPSSIQNAIKLRTLYCSGVLLIDLKSLEGMCNLEYLSVDW-----SSMEGTQGL 705

Query: 518  EVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITE 577
              L     ++LKR+   +C ++ L +          +F     K E+L  +  + + + +
Sbjct: 706  IYLP----RKLKRLWWDYCPVKRLPS----------NF-----KAEYLVELRMENSDLEK 746

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
            L    + L  L+ +++     L  +PD   ++      L    ++  LPSS+  +  L +
Sbjct: 747  LWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQNATKLIN 806

Query: 638  LDSSHCKGLESFP-------------------RTF---LLGLSAMGLLH------ISD-Y 668
            LD   CK LESFP                   R F    +G S   +L       + D +
Sbjct: 807  LDMRDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSYFEILQDRNEIEVEDCF 866

Query: 669  AVREIPQEIAYLSS-------------LEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN 715
              + +P  + YL               L  L +SG   E L   I+ +  L+ + L +  
Sbjct: 867  WNKNLPAGLDYLDCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKRMDLSESE 926

Query: 716  MLQSLPELPLC--LKYLHLIDCKMLQSLP---------------------VLPF-----C 747
             L  +P+L     LK L+L  CK L +LP                     +LP       
Sbjct: 927  NLTEIPDLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDVNLSS 986

Query: 748  LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLT------VRNCNRL 801
            L  LDL+GC+ LR+ P +   ++ L LE+     ++ E+P C++ LT      +  C RL
Sbjct: 987  LIILDLSGCSSLRTFPLISTRIECLYLENT----AIEEVPCCIEDLTRLSVLLMYCCQRL 1042

Query: 802  QSL 804
            +++
Sbjct: 1043 KNI 1045



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 88/204 (43%), Gaps = 49/204 (24%)

Query: 385  QLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA------ 438
             LP GLDYL             +R +P  F+P+ L  L++   K E+ WEG ++      
Sbjct: 870  NLPAGLDYL----------DCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKR 919

Query: 439  ---------------------------------CVPSSIQNFKYLSALSFKGCQSLRSFP 465
                                              +PS+I N   L  L  K C  L   P
Sbjct: 920  MDLSESENLTEIPDLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLP 979

Query: 466  SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
            ++++    + ++ S C +L  FP IS ++  LYL  +AIEEVP  IE LT L VL +  C
Sbjct: 980  TDVNLSSLIILDLSGCSSLRTFPLISTRIECLYLENTAIEEVPCCIEDLTRLSVLLMYCC 1039

Query: 526  KRLKRISTSFCKLRSLVTLILLGC 549
            +RLK IS +  +L SL+      C
Sbjct: 1040 QRLKNISPNIFRLTSLMVADFTDC 1063


>gi|2245043|emb|CAB10461.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268437|emb|CAB80957.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1256

 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 250/904 (27%), Positives = 415/904 (45%), Gaps = 159/904 (17%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS-DVRGNSETAGGLEHLQK 59
            ++S +   +VGIWG  GIGK+T+ +A+F Q S +F    F++      S+ +G     +K
Sbjct: 201  LESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWEK 260

Query: 60   QMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
            ++LS  L +K       I HF   ++R++  K+LI+LDDV+ +  LK L+G+ + FG GS
Sbjct: 261  ELLSEILGQK----DIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGS 316

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            RI+V T+DK++L+    E   +Y V       A +    +AF ++  P+D    +  V  
Sbjct: 317  RIIVITQDKQLLKAH--EIDLVYEVELPSQGLALKMISQYAFGKDSPPDDFKELAFEVAE 374

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                 PL L VLGSSL  + K  W K++  L    + +I +    L++ +++L  + + +
Sbjct: 375  LVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEET---LRVGYDRLNKKNREL 431

Query: 238  FLDIACFFEGEDKDFVASILDDSESDV-LDILIDKSLVSISGNF-LNMHDILQEMGRQIV 295
            F  IACFF G     V  +L+D   DV L +L DKSL+ I+ +  + MH++L+++GR+I 
Sbjct: 432  FKCIACFFNGFKVSNVKELLED---DVGLTMLADKSLIRITPDGDIEMHNLLEKLGREID 488

Query: 296  RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLD----LSKIKGINLDPRAFTNM 351
            R +S+  P KR  L + ++I  V+    GT+ + GI +      S    + ++  +F  M
Sbjct: 489  RAKSKGNPAKRQFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVINEESFKGM 548

Query: 352  SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
             NL        ++ EI             +S++ LP GL YLP KL+ L W+  PL++LP
Sbjct: 549  RNL--------QYLEIGH-----------WSEIDLPQGLVYLPLKLKLLKWNYCPLKSLP 589

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGE------KACVPSSIQNFK---------YLSALSFK 456
            S FK + LV L ++ SK+E+ WEG       K        N K          L  L+  
Sbjct: 590  STFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMDLGCSNNLKEIPDLSLAINLEELNLS 649

Query: 457  GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTD 516
             C+SL + PS++     +   +   V LI+   + G     YL         SS+E    
Sbjct: 650  KCESLVTLPSSIQNAIKLRTLYCSGVLLIDLKSLEGMCNLEYLSVDW-----SSMEGTQG 704

Query: 517  LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPIT 576
            L  L     ++LKR+   +C ++ L +          +F     K E+L  +  + + + 
Sbjct: 705  LIYLP----RKLKRLWWDYCPVKRLPS----------NF-----KAEYLVELRMENSDLE 745

Query: 577  ELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
            +L    + L  L+ +++     L  +PD   ++      L    ++  LPSS+  +  L 
Sbjct: 746  KLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQNATKLI 805

Query: 637  SLDSSHCKGLESFP-------------------RTF---LLGLSAMGLLH------ISD- 667
            +LD   CK LESFP                   R F    +G S   +L       + D 
Sbjct: 806  NLDMRDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSYFEILQDRNEIEVEDC 865

Query: 668  YAVREIPQEIAYLSS-------------LEILYLSGNNFESLPAIIKQMSQLRFIHLEDF 714
            +  + +P  + YL               L  L +SG   E L   I+ +  L+ + L + 
Sbjct: 866  FWNKNLPAGLDYLDCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKRMDLSES 925

Query: 715  NMLQSLPELPLC--LKYLHLIDCKMLQSLP---------------------VLPF----- 746
              L  +P+L     LK L+L  CK L +LP                     +LP      
Sbjct: 926  ENLTEIPDLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDVNLS 985

Query: 747  CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLT------VRNCNR 800
             L  LDL+GC+ LR+ P +   ++ L LE+     ++ E+P C++ LT      +  C R
Sbjct: 986  SLIILDLSGCSSLRTFPLISTRIECLYLENT----AIEEVPCCIEDLTRLSVLLMYCCQR 1041

Query: 801  LQSL 804
            L+++
Sbjct: 1042 LKNI 1045



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 88/204 (43%), Gaps = 49/204 (24%)

Query: 385  QLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA------ 438
             LP GLDYL             +R +P  F+P+ L  L++   K E+ WEG ++      
Sbjct: 870  NLPAGLDYL----------DCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKR 919

Query: 439  ---------------------------------CVPSSIQNFKYLSALSFKGCQSLRSFP 465
                                              +PS+I N   L  L  K C  L   P
Sbjct: 920  MDLSESENLTEIPDLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLP 979

Query: 466  SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
            ++++    + ++ S C +L  FP IS ++  LYL  +AIEEVP  IE LT L VL +  C
Sbjct: 980  TDVNLSSLIILDLSGCSSLRTFPLISTRIECLYLENTAIEEVPCCIEDLTRLSVLLMYCC 1039

Query: 526  KRLKRISTSFCKLRSLVTLILLGC 549
            +RLK IS +  +L SL+      C
Sbjct: 1040 QRLKNISPNIFRLTSLMVADFTDC 1063


>gi|74231152|gb|ABA00702.1| disease resistance protein [Phaseolus vulgaris]
          Length = 753

 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 188/576 (32%), Positives = 304/576 (52%), Gaps = 49/576 (8%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+   I+ + + +F+ S  V DV+   +   G++ ++ + LS  L E+   + P    
Sbjct: 214 KTTICDQIYQKLALQFDSSSLVLDVQDKIQR-DGIDSIRTKYLSELLKEEKSSSSP---- 268

Query: 80  FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKI 139
           +  ER++R K+L++LDDV +  QL++LI   D FGQGSRI++T+RD++VL     ++  I
Sbjct: 269 YYNERLKRTKVLLILDDVTDSAQLQKLIRGSDSFGQGSRIIMTSRDRQVLRNAGADD--I 326

Query: 140 YRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH-SRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           Y V  L  +++ + F   AFK+    E      S  V+ Y +G PL L++LGS L  + +
Sbjct: 327 YEVKELNLDDSQKLFNLHAFKQKSSAEKSYMDLSEEVLGYAEGIPLALQILGSLLYGRTR 386

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             W   L  L +    +   I+++LK+S++ L    K+IFLDIACF+ G ++  VA  LD
Sbjct: 387 EAWESELQKLKK---GQHLGIFNVLKLSYDGLEEEEKNIFLDIACFYRGHNEIAVAERLD 443

Query: 259 D---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
           D   S    +DIL D+ L+S+    + MHD++QEMG++IVR+E  + PGKRSRL++ +EI
Sbjct: 444 DFGFSSKIGMDILKDRGLISVIDGRIVMHDLIQEMGKEIVRKECPQHPGKRSRLFNAEEI 503

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMST 375
             VL+ N+G   +   F +L ++  ++L     ++ S+L +F F          L  M  
Sbjct: 504 CEVLRKNEG---VPSNFQNLKRLCHLDL-----SHCSSLTIFPF---------DLSHMKF 546

Query: 376 EEQLSY---SKVQ-LPNGLDYLPKKLRYLHWDTYPLRTLPSNF-KPKNLVELNL-RCSKV 429
            +QLS    SK++ LP   D L + L  L  D   ++ LPS+  +   L EL+L  C  +
Sbjct: 547 LKQLSLRGCSKLENLPQIQDTL-EDLVVLILDGTAIQALPSSLCRLVGLQELSLCSCLNL 605

Query: 430 EQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQ 489
           E         +PSSI +   L  L    C SL++FPS +  +    ++   C +L  FP+
Sbjct: 606 E--------IIPSSIGSLTRLCKLDLTHCSSLQTFPSTIFNLKLRNLDLCGCSSLRTFPE 657

Query: 490 ISGKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLIL 546
           I+        + L  +A++E+PSS   L +L  L+LR C  L+ +  S   L+ L  L  
Sbjct: 658 ITEPAPTFDHINLICTAVKELPSSFANLVNLRSLELRKCTDLESLPNSIVNLKLLSKLDC 717

Query: 547 LGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
            GC  L   P  + ++  L  +    + I  LP S 
Sbjct: 718 SGCARLTEIPRDIGRLTSLMELSLCDSGIVNLPESI 753



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 123/261 (47%), Gaps = 24/261 (9%)

Query: 486 EFPQISGKVTRLYLGQSAIE------EVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
           E PQ  GK +RL+  +   E       VPS+ + L  L  LDL  C  L         ++
Sbjct: 486 ECPQHPGKRSRLFNAEEICEVLRKNEGVPSNFQNLKRLCHLDLSHCSSLTIFPFDLSHMK 545

Query: 540 SLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
            L  L L GC  LE+ P+I + +E L  +  D T I  LPSS   L GL+ L +  C  L
Sbjct: 546 FLKQLSLRGCSKLENLPQIQDTLEDLVVLILDGTAIQALPSSLCRLVGLQELSLCSCLNL 605

Query: 600 DNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
           + +P +IGSL  L  + L   S++   PS++  +  LR+LD   C  L +FP    +   
Sbjct: 606 EIIPSSIGSLTRLCKLDLTHCSSLQTFPSTI-FNLKLRNLDLCGCSSLRTFPE---ITEP 661

Query: 659 AMGLLHISDY--AVREIPQEIAYLSSLEILYLSG-NNFESLPAII---KQMSQL------ 706
           A    HI+    AV+E+P   A L +L  L L    + ESLP  I   K +S+L      
Sbjct: 662 APTFDHINLICTAVKELPSSFANLVNLRSLELRKCTDLESLPNSIVNLKLLSKLDCSGCA 721

Query: 707 RFIHL-EDFNMLQSLPELPLC 726
           R   +  D   L SL EL LC
Sbjct: 722 RLTEIPRDIGRLTSLMELSLC 742



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 117/264 (44%), Gaps = 26/264 (9%)

Query: 440 VPSSIQNFKYLSALSFKGCQSLRSFPSNL-HFVCPVTINFSYCVNLIEFPQISGKVTRLY 498
           VPS+ QN K L  L    C SL  FP +L H      ++   C  L   PQI        
Sbjct: 513 VPSNFQNLKRLCHLDLSHCSSLTIFPFDLSHMKFLKQLSLRGCSKLENLPQIQ------- 565

Query: 499 LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
                        + L DL VL L G   ++ + +S C+L  L  L L  CLNLE  P  
Sbjct: 566 -------------DTLEDLVVLILDGTA-IQALPSSLCRLVGLQELSLCSCLNLEIIPSS 611

Query: 559 LEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILA 617
           +  +  L ++  +  + +   PS+  NL  L  L +  CS L   P+         +I  
Sbjct: 612 IGSLTRLCKLDLTHCSSLQTFPSTIFNLK-LRNLDLCGCSSLRTFPEITEPAPTFDHINL 670

Query: 618 AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQE 676
             +A+ +LPSS A    LRSL+   C  LES P + ++ L  +  L  S  A + EIP++
Sbjct: 671 ICTAVKELPSSFANLVNLRSLELRKCTDLESLPNS-IVNLKLLSKLDCSGCARLTEIPRD 729

Query: 677 IAYLSSLEILYLSGNNFESLPAII 700
           I  L+SL  L L  +   +LP  I
Sbjct: 730 IGRLTSLMELSLCDSGIVNLPESI 753



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 125/279 (44%), Gaps = 52/279 (18%)

Query: 550 LNLEHFPEILEKME-------HLKRI----YSDRTPITELPSSFENLPGLEVLFVEDCSK 598
            N E   E+L K E       +LKR+     S  + +T  P    ++  L+ L +  CSK
Sbjct: 498 FNAEEICEVLRKNEGVPSNFQNLKRLCHLDLSHCSSLTIFPFDLSHMKFLKQLSLRGCSK 557

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
           L+NLP    +LE L  ++   +AI  LPSS+     L+ L    C  LE  P       S
Sbjct: 558 LENLPQIQDTLEDLVVLILDGTAIQALPSSLCRLVGLQELSLCSCLNLEIIP-------S 610

Query: 659 AMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
           ++G L       R    ++ + SSL+          + P+ I  + +LR + L   + L+
Sbjct: 611 SIGSL------TRLCKLDLTHCSSLQ----------TFPSTIFNL-KLRNLDLCGCSSLR 653

Query: 719 SLPELPL---CLKYLHLIDCKMLQSLPVLPFC----LESLDLTGCNMLRSLPELPLCLQY 771
           + PE+        +++LI C  ++ LP   F     L SL+L  C  L SLP   + L+ 
Sbjct: 654 TFPEITEPAPTFDHINLI-CTAVKELPS-SFANLVNLRSLELRKCTDLESLPNSIVNLKL 711

Query: 772 LNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLC 810
           L+  DC+    L E+P        R+  RL SL E+ LC
Sbjct: 712 LSKLDCSGCARLTEIP--------RDIGRLTSLMELSLC 742



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 105/226 (46%), Gaps = 29/226 (12%)

Query: 625 LPSSVALSNMLRSLDSSHCKGLESFP-----RTFLLGLSAMGLLHISDYAVREIPQEIAY 679
           +PS+      L  LD SHC  L  FP       FL  LS  G   + +     +PQ    
Sbjct: 513 VPSNFQNLKRLCHLDLSHCSSLTIFPFDLSHMKFLKQLSLRGCSKLEN-----LPQIQDT 567

Query: 680 LSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE-----LPLCLKYLHLID 734
           L  L +L L G   ++LP+ + ++  L+ + L     L+ +P        LC   L L  
Sbjct: 568 LEDLVVLILDGTAIQALPSSLCRLVGLQELSLCSCLNLEIIPSSIGSLTRLC--KLDLTH 625

Query: 735 CKMLQSLPVLPFCLE--SLDLTGCNMLRSLPELPL---CLQYLNLEDCNMLRSLPEL--- 786
           C  LQ+ P   F L+  +LDL GC+ LR+ PE+        ++NL  C  ++ LP     
Sbjct: 626 CSSLQTFPSTIFNLKLRNLDLCGCSSLRTFPEITEPAPTFDHINL-ICTAVKELPSSFAN 684

Query: 787 PLCLQLLTVRNCNRLQSLPEILLCLQ---ELDASVLEKLSKHSPDL 829
            + L+ L +R C  L+SLP  ++ L+   +LD S   +L++   D+
Sbjct: 685 LVNLRSLELRKCTDLESLPNSIVNLKLLSKLDCSGCARLTEIPRDI 730


>gi|147862986|emb|CAN78790.1| hypothetical protein VITISV_027418 [Vitis vinifera]
          Length = 1617

 Score =  243 bits (621), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 226/697 (32%), Positives = 333/697 (47%), Gaps = 79/697 (11%)

Query: 71   EVAGPNIPHFT-----KERVRRM----KLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
            ++ G +IP  +        +R M    K+L+VLDDV+   QL  L    + FG GSRI+V
Sbjct: 845  DILGGDIPTISDISEGSYEIRHMFMSKKVLVVLDDVDSDEQLNCLFPNHNAFGLGSRIIV 904

Query: 122  TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
            T+RDK +L   R +   +Y V  L   EA + F   AF  N   +     S  +V Y KG
Sbjct: 905  TSRDKYLL--VRCQVDALYGVKELNCNEAIQLFSLHAFHMNSPQKGFINLSSCIVDYCKG 962

Query: 182  NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
             PL LEVL S L  K+K  W  VL  L +        I  +L   F  L        L+ 
Sbjct: 963  LPLALEVLSSFLFGKKKIEWKSVLQRLEK---EPFLKIQHVLVRGFETLG------MLER 1013

Query: 242  ACFFEGEDKDFVASILDDSESD---VLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
              FF GED DFV  ILD   S    ++  L DKSL+SI    L+MHD++Q+ G +IVR++
Sbjct: 1014 EIFFNGEDLDFVQRILDACHSFAKLIMQELDDKSLISILDKKLSMHDLMQKAGWEIVRRQ 1073

Query: 299  SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGI--NLDPRAFTNMSNLRL 356
            +  EPGK SRLWDP  +  VL  N     +  +  D   ++ +  N D +    +S   L
Sbjct: 1074 NHNEPGKWSRLWDPDNVHHVLTKN----TLRYLHWDGWTLESLPSNFDGKKLVGLS---L 1126

Query: 357  FKFYVPKFYEIEK-LPSMSTEEQLSYSK--VQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
                + + ++  K LP +     L  S+  ++ PN       +L  L   T  L   P  
Sbjct: 1127 KHSSIKQLWKEHKCLPKLEV-INLGNSQHLLECPNLSSAPCLELLILDGCTSLLEVHPPV 1185

Query: 414  FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
             K K L  LN++  K+              + +F      S  G +SL+           
Sbjct: 1186 TKLKRLTILNMKNCKM--------------LHHFP-----SITGLESLK----------- 1215

Query: 474  VTINFSYCVNLIEFPQISGKV---TRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
              +N S C  L +FP+I G +     L L  +AI E+P S+  L  L +LD++ CK L  
Sbjct: 1216 -VLNLSGCSKLDKFPEIQGYMECLVELNLEGTAIVELPFSVVFLPRLVLLDMQNCKNLTI 1274

Query: 531  ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
            + ++   L+ L TL+L GC  LE FPEI+E ME L+++  D   I ELP S  +L GL+ 
Sbjct: 1275 LPSNIYSLKFLGTLVLSGCSGLERFPEIMEVMECLQKLLLDGISIKELPPSIVHLKGLQS 1334

Query: 591  LFVEDCSKLDNLPDNIGSLEYL-YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            L +  C  L +LP++I SL  L   I++  S +S+LP  +      R L   +  G+   
Sbjct: 1335 LSLRKCKNLKSLPNSICSLRSLETLIVSGCSKLSKLPEELG-----RLLHRENSDGI-GL 1388

Query: 650  PRTFLLGLSAMGLLHIS--DYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
               +L GL ++  L +S  +   R I   + +L  LE L LS NN  ++P  + ++S LR
Sbjct: 1389 QLPYLSGLYSLKYLDLSGCNLTDRSINDNLGHLRFLEELNLSRNNLVTIPEEVNRLSHLR 1448

Query: 708  FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVL 744
             + +     L+ + +LP  +K L   DC  L+SL VL
Sbjct: 1449 VLSVNQCKRLREISKLPPSIKLLDAGDCISLESLSVL 1485



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 176/575 (30%), Positives = 272/575 (47%), Gaps = 95/575 (16%)

Query: 381  YSKVQLPNGLDYLPKK--LRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKA 438
            +S++  P+ + ++  K  LRYLHWD + L +LPSNF  K LV L+L+ S ++Q W+ E  
Sbjct: 1081 WSRLWDPDNVHHVLTKNTLRYLHWDGWTLESLPSNFDGKKLVGLSLKHSSIKQLWK-EHK 1139

Query: 439  CVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLY 498
            C+P        L  ++    Q L          CP  ++ + C+ L+           + 
Sbjct: 1140 CLPK-------LEVINLGNSQHL--------LECP-NLSSAPCLELL-----------IL 1172

Query: 499  LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
             G +++ EV   +  L  L +L+++ CK L     S   L SL  L L GC  L+ FPEI
Sbjct: 1173 DGCTSLLEVHPPVTKLKRLTILNMKNCKMLHHF-PSITGLESLKVLNLSGCSKLDKFPEI 1231

Query: 559  LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
               ME L  +  + T I ELP S   LP L +L +++C  L  LP NI SL++L  ++ +
Sbjct: 1232 QGYMECLVELNLEGTAIVELPFSVVFLPRLVLLDMQNCKNLTILPSNIYSLKFLGTLVLS 1291

Query: 619  ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIA 678
                                    C GLE FP    + +  +  L +   +++E+P  I 
Sbjct: 1292 G-----------------------CSGLERFPEIMEV-MECLQKLLLDGISIKELPPSIV 1327

Query: 679  YLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKM 737
            +L  L+ L L    N +SLP  I  +  L  + +   + L  LPE    L +    D   
Sbjct: 1328 HLKGLQSLSLRKCKNLKSLPNSICSLRSLETLIVSGCSKLSKLPEELGRLLHRENSDGIG 1387

Query: 738  LQSLPVLP--FCLESLDLTGCNML-RSLPELPLCLQYL---NLEDCNMLRSLPELPLC-- 789
            LQ LP L   + L+ LDL+GCN+  RS+ +    L++L   NL   N++    E+     
Sbjct: 1388 LQ-LPYLSGLYSLKYLDLSGCNLTDRSINDNLGHLRFLEELNLSRNNLVTIPEEVNRLSH 1446

Query: 790  LQLLTVRNCNRLQSLPEILLCLQELDAS---VLEKLSKHSPDLQWAPESLKSAA----IC 842
            L++L+V  C RL+ + ++   ++ LDA     LE LS  SP    +P+ L S++    + 
Sbjct: 1447 LRVLSVNQCKRLREISKLPPSIKLLDAGDCISLESLSVLSPQ---SPQYLSSSSRLHPVT 1503

Query: 843  FEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEI 902
            F+ TNC  L   A + +   ++L   H                 L E+  S IVLPGS I
Sbjct: 1504 FKLTNCFAL---AQDNVA--TILEKLHQNF--------------LPEIEYS-IVLPGSTI 1543

Query: 903  PDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
            P+WF + S GSS+ I+LP +      +GFA C VL
Sbjct: 1544 PEWFQHPSIGSSVTIELPRNWHNEEFLGFAXCCVL 1578


>gi|4582487|emb|CAA16927.2| resistence protein-like [Arabidopsis thaliana]
 gi|7268746|emb|CAB78952.1| resistence protein-like [Arabidopsis thaliana]
          Length = 1239

 Score =  243 bits (620), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 187/573 (32%), Positives = 275/573 (47%), Gaps = 96/573 (16%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S  V+I+GIWG+ GI               +F   C +   R           L++  +S
Sbjct: 711  STDVEIMGIWGIAGI---------------DFHLMCQMKRPR----------QLREDFIS 745

Query: 64   TTLSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
                E+  +   ++ P F ++   +  +L+VLDDV+     + +IG    F  G RI++T
Sbjct: 746  KLFGEEKGLGASDVKPSFMRDWFHKKTILLVLDDVSNARDAEAVIGGFGWFSHGHRIILT 805

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            +R K+VL   + + KK Y +  L   E+F     +   EN    +L       +S + G 
Sbjct: 806  SRSKQVL--VQCKVKKPYEIQKLSDFESFRLCKQYLDGENPVISEL-------ISCSSGI 856

Query: 183  PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
            PL L++L SS+  +  ++    L  L +   ++I + +   + SF+ L    K+IFLD+A
Sbjct: 857  PLALKLLVSSVSKQYITNMKDHLQSLRKDPPTQIQEAF---RRSFDGLDENEKNIFLDLA 913

Query: 243  CFFEGEDKDFVASILDDSES-DVLDI--LIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
            CFF G+ KD+   +LD       + I  LID+SL+S+  N + M    Q+MGR IV +E 
Sbjct: 914  CFFRGQSKDYAVLLLDACGFFTYMGICELIDESLISLVDNKIEMPIPFQDMGRIIVHEED 973

Query: 300  EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
            E +P +RSRLWD K+I  VL +N GT+AIEGIFLD S +    L P  F  M NLRL KF
Sbjct: 974  E-DPCERSRLWDSKDIVDVLTNNSGTEAIEGIFLDASDLT-CELSPTVFGKMYNLRLLKF 1031

Query: 360  YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
            Y           S S  +     K+ LP+GLD LP +L  LHW+ YPL  LP  F P NL
Sbjct: 1032 YC----------STSGNQ----CKLTLPHGLDTLPDELSLLHWENYPLVYLPQKFNPVNL 1077

Query: 420  VELNLRCSKVEQPWEGEK----------------------------------AC-----V 440
            VELN+  S +E+ WEG+K                                   C     V
Sbjct: 1078 VELNMPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCTSLIDV 1137

Query: 441  PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLG 500
              SI     L +L+ K C  LRS PS +       +N S C    +    +  +  +YL 
Sbjct: 1138 SMSIPCCGKLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFEDIQDFAPNLEEIYLA 1197

Query: 501  QSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
             ++I E+P SI  LT+L  LDL  C+RL+ + +
Sbjct: 1198 GTSIRELPLSIRNLTELVTLDLENCERLQEMPS 1230



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 77/128 (60%), Gaps = 4/128 (3%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+  ++VGI G  GIGKTT+AKA+F + S +F    FV+  R N +         ++ LS
Sbjct: 201 SEKARMVGISGPSGIGKTTIAKALFSKLSPQFHLRAFVTYKRTNQDDYDMKLCWIEKFLS 260

Query: 64  TTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
             L +K L+V         ++ +   K+LI+LDDV+++  LK L+G+   FG GSRIVV 
Sbjct: 261 EILGQKDLKVLDLGA---VEQSLMHKKVLIILDDVDDLELLKTLVGQTGWFGFGSRIVVI 317

Query: 123 TRDKRVLE 130
           T+D+++L+
Sbjct: 318 TQDRQLLK 325



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 43/206 (20%)

Query: 637  SLDSSHCK-----GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN 691
            S   + CK     GL++ P         + LLH  +Y +  +PQ+   ++ +E L +  +
Sbjct: 1034 STSGNQCKLTLPHGLDTLP-------DELSLLHWENYPLVYLPQKFNPVNLVE-LNMPYS 1085

Query: 692  NFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL--PLCLKYLHLIDCKMLQSLPV-LPFC- 747
            N E L    K + +L+ I L     L  +  L   L L+++ L  C  L  + + +P C 
Sbjct: 1086 NMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCTSLIDVSMSIPCCG 1145

Query: 748  -LESLDLTGCNMLRSLPELP--LCLQYLNLEDCNMLR-----------------SLPELP 787
             L SL++  C+ LRSLP +     L+ LNL  C+                    S+ ELP
Sbjct: 1146 KLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFEDIQDFAPNLEEIYLAGTSIRELP 1205

Query: 788  LCLQLLT------VRNCNRLQSLPEI 807
            L ++ LT      + NC RLQ +P +
Sbjct: 1206 LSIRNLTELVTLDLENCERLQEMPSL 1231



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 4/110 (3%)

Query: 616  LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
            L   +++  +  S+     L SL+   C  L S P   ++ L+ + LL++S  +  E  Q
Sbjct: 1128 LEGCTSLIDVSMSIPCCGKLVSLNMKDCSRLRSLPS--MVDLTTLKLLNLSGCSEFEDIQ 1185

Query: 676  EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
            + A   +LE +YL+G +   LP  I+ +++L  + LE+   LQ +P LP+
Sbjct: 1186 DFA--PNLEEIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMPSLPV 1233


>gi|357500665|ref|XP_003620621.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495636|gb|AES76839.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1057

 Score =  243 bits (619), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 225/683 (32%), Positives = 338/683 (49%), Gaps = 97/683 (14%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V+ +GI GMGGIGKTTLA  ++ Q SH+F  SCF+ DV            +QKQ
Sbjct: 211 LNSVDGVRAIGICGMGGIGKTTLATTLYGQISHQFSASCFIDDVTKIYGLHDDPLDVQKQ 270

Query: 61  MLSTTLS-EKLEVAGPNIPHFTKERVRRM---KLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           +L  TL  E  ++   N  H T    R++   + L++LD+V++V QL+++    +  G G
Sbjct: 271 ILFQTLGIEHQQIC--NRYHATTLIQRKLCHERTLMILDNVDQVEQLEKIAVHREWLGPG 328

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS--RS 174
           SRI++ +RD+ VL+ +  +   +Y+V+ L++ EA   FC  AFK+       N+ +    
Sbjct: 329 SRIIIISRDEHVLKAYGVD--VVYKVSLLDWNEAHMLFCRKAFKDEKIIMS-NYQNLVDQ 385

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           ++ Y KG PL ++VLGS L  +  + W   L    R+ +S + D+ D+L++SF+ L    
Sbjct: 386 ILHYAKGLPLAIKVLGSFLFGRNVTEWKSAL---TRLRQSPVKDVMDVLQLSFDGLNETE 442

Query: 235 KSIFLDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMG 291
           K IFL IACFF  + ++ V +IL+     +D+ L +LIDKSLVSIS + +NMH +L+E+G
Sbjct: 443 KDIFLHIACFFNNDSEEDVKNILNCCGFHADIGLRVLIDKSLVSISYSIINMHSLLEELG 502

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IV+  S KEP K SRLW  +++  V+  N     +E I L   + +    D    + M
Sbjct: 503 RKIVQNSSSKEPRKWSRLWSTEQLYDVMLENM-EKHVEAIVLYYKEDE--EADFEHLSKM 559

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
           SNLRL  F       +   PS                    L  KLR++HW  YP + LP
Sbjct: 560 SNLRLL-FIANYISTMLGFPSC-------------------LSNKLRFVHWFRYPSKYLP 599

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
           SNF P  LVEL L  S ++Q W           +N KYL  L     +  R         
Sbjct: 600 SNFHPNELVELILTESNIKQLW-----------KNKKYLPNLRTLDLRHSR--------- 639

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                N    ++  EFP +     RL L G   + E+  SI  L  L  L+L+ CK L  
Sbjct: 640 -----NLEKIIDFGEFPNLE----RLDLEGCINLVELDPSIGLLRKLVYLNLKDCKSLVS 690

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITEL-PSSFENLPGLE 589
           I  +   L SL  L + GC  + + P  L K      I S++    ++  S+  +LPGL+
Sbjct: 691 IPNNIFGLSSLQYLNMCGCSKVFNNPRRLMK----SGISSEKKQQHDIRESASHHLPGLK 746

Query: 590 -VLFVEDCSK--------------------LDNLPDNIGSLEYLYYILAAASAISQLPSS 628
            ++   D S                     L ++PD I  L +L  +  A +    LPS 
Sbjct: 747 WIILAHDSSHMLPSLHSLCCLRKVDISFCYLSHVPDAIECLHWLERLNLAGNDFVTLPSL 806

Query: 629 VALSNMLRSLDSSHCKGLESFPR 651
             LS ++  L+  HCK LES P+
Sbjct: 807 RKLSKLV-YLNLEHCKLLESLPQ 828



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 171/450 (38%), Gaps = 125/450 (27%)

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
            ++  L L +S I+++  + + L +L  LDLR  + L++I   F +  +L  L L GC+N
Sbjct: 605 NELVELILTESNIKQLWKNKKYLPNLRTLDLRHSRNLEKI-IDFGEFPNLERLDLEGCIN 663

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
           L                        EL  S   L  L  L ++DC  L ++P+NI  L  
Sbjct: 664 L-----------------------VELDPSIGLLRKLVYLNLKDCKSLVSIPNNIFGLSS 700

Query: 612 LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVR 671
           L Y                       L+   C  + + PR  +   S +       + +R
Sbjct: 701 LQY-----------------------LNMCGCSKVFNNPRRLMK--SGISSEKKQQHDIR 735

Query: 672 EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
           E      +L  L+ + L+ ++   LP++   +  LR + +  F  L  +P+   CL +L 
Sbjct: 736 ESASH--HLPGLKWIILAHDSSHMLPSL-HSLCCLRKVDI-SFCYLSHVPDAIECLHWL- 790

Query: 732 LIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC--LQYLNLEDCNMLRSLPELPLC 789
                            E L+L G N   +LP L     L YLNLE C +L SLP+LP  
Sbjct: 791 -----------------ERLNLAG-NDFVTLPSLRKLSKLVYLNLEHCKLLESLPQLPF- 831

Query: 790 LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCL 849
                  N   +    +   C     A +L                           NC 
Sbjct: 832 -----PTNTGEVHREYDDYFC----GAGLL-------------------------IFNCP 857

Query: 850 KLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQ 909
           KL  + + + +  +LL ++    A+ R   E+ I            V PGSEIP W +NQ
Sbjct: 858 KLGEREHCRSM--TLLWMKQFIKANPRSSSEIQI------------VNPGSEIPSWINNQ 903

Query: 910 SSGSSICIQLPP--HSSCRNLIGFAFCAVL 937
             G SI I   P  H +  N+IG   CA  
Sbjct: 904 RMGYSIAIDRSPIRHDNDNNIIGIVCCAAF 933


>gi|13509221|emb|CAC35330.1| N1-D protein [Linum usitatissimum]
          Length = 1108

 Score =  243 bits (619), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 256/865 (29%), Positives = 410/865 (47%), Gaps = 129/865 (14%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +DSS + +I+GI GMGG+GKTTLAKA++D+ S +FE   F+ ++R       G+  LQ +
Sbjct: 227  LDSSTSEKIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENIRDTLSEKNGVSILQNK 286

Query: 61   MLSTTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            ++S  L +    A    +     ++RV R KLLIVLDDV+E  Q   ++G+L+ F   SR
Sbjct: 287  IISGILKKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQFDEVLGKLNNFSMDSR 346

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
             ++TTRD R LE  R  E K++ +  +  + +   F   AF  +  P+D    S   V  
Sbjct: 347  FLITTRDARGLELLR--ECKMFELQEMSPDHSLTLFNKNAFGVDFPPKDYAILSNEFVQA 404

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL ++V+GS L    K  W + L +  +I  +++    + LKIS+N+LT   K IF
Sbjct: 405  AAGLPLYIKVIGSLLFRMDKIFWEEKLEEFKKISPTKVQ---ERLKISYNELTYNEKQIF 461

Query: 239  LDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVS-----ISGNFLN---MHDIL 287
            LDIAC+F G  K     +  D +      +  LI +SL+      I  + LN   MHD +
Sbjct: 462  LDIACYFIGSYKIEPMRMWSDCDFYPESTIRSLIQRSLIKFQRSRIKSDILNTFWMHDHI 521

Query: 288  QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA 347
             ++GR IVR+E+ K+P KRSR+W  K+   +LKH KGTD +E + +D+   +G +L    
Sbjct: 522  IDLGRAIVREENNKKPYKRSRIWSNKDAIDMLKHKKGTDCVEVLTVDM---EGEDL---I 575

Query: 348  FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGL-DYLPKKLRYLHWDTYP 406
             TN               E+EKL  +     LS S  +L     D LP  LR+L    + 
Sbjct: 576  LTNK--------------ELEKLTRL---RYLSVSNARLAGDFKDVLP-NLRWLR--LHS 615

Query: 407  LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS 466
              ++P+    K LV+  L    V   W+G      + ++    L A++ + C +L   P 
Sbjct: 616  CDSVPTGLYLKKLVQFELVDCSVRDGWKGW-----NELKVAHKLKAVTLERCFNLNKVPD 670

Query: 467  NLHFVCPVTINFSYCVNL-------------------IEFPQISGKVTRL----YL--GQ 501
              H      ++F  C N+                    +  +I G++ RL    YL  G 
Sbjct: 671  FSHCRDLEWLDFDECRNMRGEVDIGNFKSLRFLLISKTKITKIKGEIGRLLNLKYLIAGG 730

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S+++EVP+ I  L+ LE L L      K   T      SL++L L+     +  P+    
Sbjct: 731  SSLKEVPAGISKLSSLEFLTLALNDPYKSDFTEMLP-TSLMSL-LISNDTQKSCPDT--S 786

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASA 621
            +E+L+R          LP +  NL  L VL++ D    + L   +G L+ L Y+     +
Sbjct: 787  LENLQR----------LP-NLSNLINLSVLYLMDVGICEIL--GLGELKMLEYL-----S 828

Query: 622  ISQLPSSVALSN-----MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD----YAVRE 672
            I + P  V L       +L+ L    C  ++  P   L+ L+ + LL I D      +  
Sbjct: 829  IQRAPRIVHLDGLENLVLLQHLRVEGCPIIKKLPS--LVALTRLELLWIQDCPLVTEIHG 886

Query: 673  IPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHL-------EDFNMLQSLPELP 724
            + Q    LS L ++  S     E+L +++K + +L  +            +M   L EL 
Sbjct: 887  VGQLWESLSDLGVVGCSALIGLEALHSMVK-LERLLLVGCLLTETMPPSLSMFTKLTELS 945

Query: 725  LC-LKYLHLIDCKMLQSLPV--LPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLR 781
            LC + +    D   L++L V  L FC E +++ G + L S       L++L++E C  +R
Sbjct: 946  LCAMPWKQFPDLSNLKNLRVLCLSFCQELIEVPGLDALES-------LEWLSMEGCRSIR 998

Query: 782  SLPELPLC--LQLLTVRNCNRLQSL 804
             +P+L     L+ L V +C +L+ +
Sbjct: 999  KVPDLSGLKKLKTLDVESCIQLKEV 1023


>gi|357487993|ref|XP_003614284.1| TMV resistance protein N [Medicago truncatula]
 gi|355515619|gb|AES97242.1| TMV resistance protein N [Medicago truncatula]
          Length = 1047

 Score =  242 bits (618), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 189/590 (32%), Positives = 294/590 (49%), Gaps = 65/590 (11%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEG-SCFVSDVRGNSET-AGGLEHLQK 59
           D S  V I+GIWGMGG+GKTT AKA+++Q    F+G + F+  +R   +  +GG+  LQ+
Sbjct: 202 DQSCKVCIIGIWGMGGLGKTTTAKALYNQIHRRFQGRTSFLESIREVCDNNSGGVITLQE 261

Query: 60  QMLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           Q+L   L  K ++    +   TK   R++R K+L+VLDDV +  QLK L       G GS
Sbjct: 262 QLLLDLLEIKQKIHSIALGK-TKIMTRLQRQKVLVVLDDVTKSEQLKALCANPKLLGSGS 320

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            +++TTRD R+L+ F+ +   +Y +  ++  ++ E F   AF++ +  +  +  SR+VV+
Sbjct: 321 VLIITTRDLRLLKSFKVDH--VYTMTEMDKHQSLELFSCHAFQQPNPRDKFSELSRNVVA 378

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS- 236
           Y KG PL LEVLG  L  + +  W   L  L +I     +D+  IL+IS++ L    K  
Sbjct: 379 YCKGLPLALEVLGCYLSERTEKEWRDALQILEKIPN---NDVQQILRISYDGLEDYTKQD 435

Query: 237 IFLDIACFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSI-SGNFLNMHDILQEMGR 292
           IFLDI CFF G+++  V  IL+     +D+ + ILI++SLV +   N L MHD+L++MGR
Sbjct: 436 IFLDICCFFIGKNRADVTEILNGCGLHADIGISILIERSLVKVEKNNTLGMHDLLRDMGR 495

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
            I  + S KEP K SRLW   +++ VL    GT+ +EG+  +L           AF +M 
Sbjct: 496 SIAGESSIKEPAKHSRLWFHDDVNDVLLKKNGTEIVEGLIFELPITHRTRFGTNAFQDMK 555

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            LRL K                         V L      + K+LR++ W     + +P 
Sbjct: 556 KLRLLKL----------------------DGVDLIGDYGLISKQLRWVDWQRPTFKCIPD 593

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           +    NLV   L+ S + Q W+  K      I N  +   L                   
Sbjct: 594 DSDLGNLVVFELKHSNIGQVWQEPKLLDKLKILNVSHNKYLK------------------ 635

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
            +T +FS   NL +          + +   ++ EV  SI  L ++ +++LR CK L  + 
Sbjct: 636 -ITPDFSKLPNLEKL---------IMMECPSLIEVHQSIGDLKNIVLINLRDCKSLANLP 685

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
               +L S+ TLIL GC  +E   E + +ME L  + +  T I ++P S 
Sbjct: 686 REIYQLISVKTLILSGCSKIEKLEEDIMQMESLTALIAANTGIKQVPYSI 735



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 20/229 (8%)

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
           G +    L  S I +V    + L  L++L++   K LK I+  F KL +L  LI++ C +
Sbjct: 598 GNLVVFELKHSNIGQVWQEPKLLDKLKILNVSHNKYLK-ITPDFSKLPNLEKLIMMECPS 656

Query: 552 LEHFPEILEKMEHLKRIY----SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
           L    E+ + +  LK I      D   +  LP     L  ++ L +  CSK++ L ++I 
Sbjct: 657 L---IEVHQSIGDLKNIVLINLRDCKSLANLPREIYQLISVKTLILSGCSKIEKLEEDIM 713

Query: 608 SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL--ESFPRTFLLGLSAM--GLL 663
            +E L  ++AA + I Q+P S+A S  +  +     +GL  + FP      +S     L 
Sbjct: 714 QMESLTALIAANTGIKQVPYSIARSKSIGYISLCGYEGLSHDVFPSLIWSWMSPTRNSLS 773

Query: 664 HISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE 712
           H+  +A   +        SL  L +  NN +    ++  +S+LR +  +
Sbjct: 774 HVFPFAGNSL--------SLVSLDVESNNMDYQSPMVTVLSKLRCVWFQ 814


>gi|357517699|ref|XP_003629138.1| TMV resistance protein N [Medicago truncatula]
 gi|355523160|gb|AET03614.1| TMV resistance protein N [Medicago truncatula]
          Length = 1084

 Score =  242 bits (618), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 184/589 (31%), Positives = 289/589 (49%), Gaps = 63/589 (10%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEG-SCFVSDVRGNSET-AGGLEHLQK 59
           + S+ V ++GIWGMGG GKTT AKAI+++    FEG + F   +R   +  + G+ HLQ+
Sbjct: 201 NQSNKVCMIGIWGMGGSGKTTTAKAIYNKIHRRFEGRTSFFESIREVCDNNSRGVIHLQQ 260

Query: 60  QMLSTTLSEKLEVAGPNIPHFTKE-RVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           Q+L   L  K E+    +     E R+R  K  IVLDDV    QLK L  +   FG GS 
Sbjct: 261 QLLLDLLQIKQEIHSIALGMTKIEKRLRGQKAFIVLDDVTTPEQLKALCADPKLFGSGSV 320

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRD R+L     +   I+ +  ++  ++ E FC  AF++ +  E     ++ VV+Y
Sbjct: 321 LIITTRDARLLNSLSDDH--IFTMTEMDKYQSLELFCWHAFQQPNPREGFCELTKKVVAY 378

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSI 237
             G PL LEVLGS L +++K  W   L  L +I  +++      L+IS++ L     K I
Sbjct: 379 CGGLPLALEVLGSYLSMRKKLEWKSALSKLEKIPNNQVQQK---LRISYDGLEDYTEKDI 435

Query: 238 FLDIACFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQ 293
           FLDI CFF G+++  V  IL+     +D+ + +LI++SL+ +   N L MHD+L++MGR 
Sbjct: 436 FLDICCFFIGKNRADVTEILNGCGLHADIGIVVLIERSLIKVDKNNKLQMHDLLRDMGRA 495

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IV + S KEP K SRLW   ++  VL    GTD IEG+ L   +   I     +F  M  
Sbjct: 496 IVGEISVKEPAKHSRLWFHDDVLDVLSKKTGTDTIEGMILKCQRTGRIIFGTNSFQEMQK 555

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LRL K                         V L      + K+LR++ W     + +P++
Sbjct: 556 LRLLKL----------------------DGVHLMGDYGLISKQLRWVDWQRSTFKFIPND 593

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           F  +NLV   L+   V Q W+  K            L  L+    + L+S P        
Sbjct: 594 FDLENLVVFELKHGNVRQVWQETKL--------LDKLKILNLSHSKYLKSTP-------- 637

Query: 474 VTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
                    +  + P +   + +      ++ EV +SI  L +L +++ + C  L  +  
Sbjct: 638 ---------DFAKLPNLEKLIMK---DCQSLSEVHTSIGDLKNLLLINFKDCTSLGNLPK 685

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
              K+RS+ +LIL GC  ++   E + +ME L  + +  T I ++P S 
Sbjct: 686 EVYKVRSVKSLILSGCSMIDKLEEDILQMESLTTLIAANTGIKQVPYSI 734



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 18/221 (8%)

Query: 499 LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
           L    + +V    + L  L++L+L   K LK  +  F KL +L  LI+  C +L      
Sbjct: 604 LKHGNVRQVWQETKLLDKLKILNLSHSKYLKS-TPDFAKLPNLEKLIMKDCQSLSEVHTS 662

Query: 559 LEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILA 617
           +  +++L  I + D T +  LP     +  ++ L +  CS +D L ++I  +E L  ++A
Sbjct: 663 IGDLKNLLLINFKDCTSLGNLPKEVYKVRSVKSLILSGCSMIDKLEEDILQMESLTTLIA 722

Query: 618 AASAISQLPSSVALSNMLRSLDSSHCKGL--ESFPRTFLLGLS----AMGLLHISDYAVR 671
           A + I Q+P S+A S  +  +     +GL  + FP      +S    ++ L+H   +A  
Sbjct: 723 ANTGIKQVPYSIARSKSIAYISLCGYEGLSCDVFPSLIWSWMSPTINSLSLIH--PFAGN 780

Query: 672 EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE 712
            +        SL  L +  NN +    ++  +S+LR + ++
Sbjct: 781 SL--------SLVSLDVESNNMDYQSPMLTVLSKLRCVWVQ 813



 Score = 47.8 bits (112), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 80/362 (22%), Positives = 134/362 (37%), Gaps = 76/362 (20%)

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDS 640
           F  LP LE L ++DC  L  +  +IG L+ L  I     +++  LP  V     ++SL  
Sbjct: 639 FAKLPNLEKLIMKDCQSLSEVHTSIGDLKNLLLINFKDCTSLGNLPKEVYKVRSVKSLIL 698

Query: 641 SHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAII 700
           S C  ++      +L + ++  L  ++  ++++P  IA   S  I Y+S   +E L   +
Sbjct: 699 SGCSMIDKLEED-ILQMESLTTLIAANTGIKQVPYSIA--RSKSIAYISLCGYEGLSCDV 755

Query: 701 KQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLR 760
                                                    P L +   S  +   +++ 
Sbjct: 756 ----------------------------------------FPSLIWSWMSPTINSLSLIH 775

Query: 761 SLPELPLCLQYLNLEDCNMLRSLPELPLC--LQLLTVRNCNRLQSLPEILLCLQELDASV 818
                 L L  L++E  NM    P L +   L+ + V+  +  Q   E+   + +L    
Sbjct: 776 PFAGNSLSLVSLDVESNNMDYQSPMLTVLSKLRCVWVQCHSENQLTQELRRFIDDLYDVN 835

Query: 819 LEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLG 878
             +L   S   Q    SLKS  I           G  +++I+ D+L +          L 
Sbjct: 836 FTELETTSYGHQITNISLKSIGI-----------GMGSSQIVLDTLDK---------SLA 875

Query: 879 YEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPH-SSCRNLIGFAFCAVL 937
             +A N   S        LPG   P W + +  G S+  Q+P + SSC  + G   C V 
Sbjct: 876 QGLATNSSDS-------FLPGDNYPSWLAYKCEGPSVLFQVPENSSSC--MKGVTLCVVY 926

Query: 938 DS 939
            S
Sbjct: 927 SS 928


>gi|297848192|ref|XP_002891977.1| hypothetical protein ARALYDRAFT_474812 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337819|gb|EFH68236.1| hypothetical protein ARALYDRAFT_474812 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 960

 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 202/666 (30%), Positives = 311/666 (46%), Gaps = 110/666 (16%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETA---GGLE-HLQK 59
           +D  +IVGI G  GIGK+T+A+A+ +  S  F+ +CF+ ++  +++      GL+  LQ+
Sbjct: 55  NDGAKIVGISGTAGIGKSTIARALHNALSTRFQHNCFMDNLHESNKIGLVDYGLKLRLQE 114

Query: 60  QMLSTTLSEKLEVAGPNIPH--FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           Q+LS  L+    + G  I H    +ER+   ++LI+LDDV  + QL+ L   +  FG GS
Sbjct: 115 QLLSKILN----LDGIKIGHSGVIQERLHDQRVLIILDDVESLDQLEAL-ANIMWFGPGS 169

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           R++VTT +K +L++    +  IY V      EA   FC  AF++   P      +  V  
Sbjct: 170 RVIVTTENKEILQQHGISD--IYHVGFPSSREALMIFCLSAFRQISPPGGFMDLAVEVAK 227

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                PL L VLGSSL  K  S W + L  L    +  I  +   LK+ +  L  + +++
Sbjct: 228 LCGNLPLALHVLGSSLRGKNYSDWIEELPRLQTCLDGRIESV---LKVGYESLHEKDQAL 284

Query: 238 FLDIACFFEGEDKDFVASILDDSESDV---------LDILIDKSLVSISGNF---LNMHD 285
           FL IA FF  E  D V S+L  +  +V         L IL ++ L+ I       + MH 
Sbjct: 285 FLYIAVFFNYEHADHVTSMLAKTNLNVRPGLKILPGLKILANRHLIHIGHGAKGEVVMHR 344

Query: 286 ILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDP 345
           +LQ M RQ++   S++EP KR  L D +EIS VL++ +G  +I GI  D+ +I  + L  
Sbjct: 345 LLQVMARQVI---SKQEPWKRQILVDNQEISYVLENAEGNGSIVGISFDVGEINKLTLSA 401

Query: 346 RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
           RAF  M NL L K Y            ++ + QL      +P  +D+LP  L  L WD Y
Sbjct: 402 RAFERMHNLFLLKVYD---------RWLTGKRQL-----HIPEEMDFLP-PLSLLRWDAY 446

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK---------------------------- 437
             +TLP  F P+NLVEL++  S++E+ W+G +                            
Sbjct: 447 QRKTLPRRFCPENLVELHMPDSQLEKLWDGTQPLLNLTKMNFRGSSCLKKLPDLSNASNL 506

Query: 438 ------ACV-----PSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIE 486
                  C+     PSSI N + L+ L    C+SL+  P+ ++      I    C  L  
Sbjct: 507 ERLDLYECIALVELPSSISNLRKLNYLETNLCRSLQVIPTLINLAFLKEIKMMGCSRLRS 566

Query: 487 FPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLIL 546
           FP I   +  L + ++ + E P+S+   + L+  D+ G   LK  ST             
Sbjct: 567 FPDIPTNIINLSVMETTVAEFPASLRHFSLLKSFDISGSVNLKTFST------------- 613

Query: 547 LGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNI 606
                  H P ++    HL     D + I  +      L  L VL + +C KL +LP   
Sbjct: 614 -------HLPTVVVTELHL-----DNSGIESITDCIRGLHNLRVLALSNCKKLKSLPKLP 661

Query: 607 GSLEYL 612
            SL++L
Sbjct: 662 SSLKWL 667



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 111/251 (44%), Gaps = 35/251 (13%)

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           +  L++  S +E++    + L +L  ++ RG   LK++        +L  L L  C+ L 
Sbjct: 460 LVELHMPDSQLEKLWDGTQPLLNLTKMNFRGSSCLKKLP-DLSNASNLERLDLYECIALV 518

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD---NIGSLE 610
             P  +  +  L  + ++     ++  +  NL  L+ + +  CS+L + PD   NI +L 
Sbjct: 519 ELPSSISNLRKLNYLETNLCRSLQVIPTLINLAFLKEIKMMGCSRLRSFPDIPTNIINLS 578

Query: 611 YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV 670
            +       + +++ P+S+   ++L+S D S    L++F              H+    V
Sbjct: 579 VM------ETTVAEFPASLRHFSLLKSFDISGSVNLKTFST------------HLPTVVV 620

Query: 671 REIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
            E             L+L  +  ES+   I+ +  LR + L +   L+SLP+LP  LK+L
Sbjct: 621 TE-------------LHLDNSGIESITDCIRGLHNLRVLALSNCKKLKSLPKLPSSLKWL 667

Query: 731 HLIDCKMLQSL 741
               C+ L+ +
Sbjct: 668 RANYCESLERV 678



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 151/386 (39%), Gaps = 99/386 (25%)

Query: 563 EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAAS 620
           E+L  ++   + + +L    + L  L  +     S L  LPD  N  +LE L   L    
Sbjct: 458 ENLVELHMPDSQLEKLWDGTQPLLNLTKMNFRGSSCLKKLPDLSNASNLERLD--LYECI 515

Query: 621 AISQLPSSVALSNMLRSLDSSHCKGLESFPR----TFLLGLSAMGLLHISDYAVREIPQE 676
           A+ +LPSS++    L  L+++ C+ L+  P      FL  +  MG   +  +   +IP  
Sbjct: 516 ALVELPSSISNLRKLNYLETNLCRSLQVIPTLINLAFLKEIKMMGCSRLRSFP--DIPTN 573

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSL-PELP-LCLKYLHLID 734
           I  LS +E            PA ++  S L+   +     L++    LP + +  LHL D
Sbjct: 574 IINLSVME------TTVAEFPASLRHFSLLKSFDISGSVNLKTFSTHLPTVVVTELHL-D 626

Query: 735 CKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLT 794
              ++S+            T C  +R L  L    + L L +C  L+SLP+LP  L+ L 
Sbjct: 627 NSGIESI------------TDC--IRGLHNL----RVLALSNCKKLKSLPKLPSSLKWLR 668

Query: 795 VRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGK 854
              C  L+               V E L+  + DL              +F+NC KL  +
Sbjct: 669 ANYCESLE--------------RVSEPLNTPNADL--------------DFSNCFKLGRQ 700

Query: 855 ANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSS 914
           A   I     +  R +                          LPG ++P  F +++ G+S
Sbjct: 701 ARRAIFQQWFVDGRAL--------------------------LPGRKVPALFDHRARGNS 734

Query: 915 ICIQLPPHSSCRNLIGFAFCAVLDSK 940
           + I   P+S+      +  C V+ ++
Sbjct: 735 LTI---PNSA-----SYKVCVVISTE 752


>gi|280967726|gb|ACZ98532.1| TNL [Malus x domestica]
          Length = 990

 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 217/697 (31%), Positives = 329/697 (47%), Gaps = 125/697 (17%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S+ V +VGIWGMGG+GKTT AKAI++Q    F+   F++D   +S +   L +LQ +++
Sbjct: 226 GSNDVLMVGIWGMGGLGKTTAAKAIYNQIHPMFQFKSFLAD-NSDSTSKDRLVYLQNKLI 284

Query: 63  STTLSEKLEV----AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
              L EK ++     G N+    K++ +  ++L+++D+++E  QL  + G  D FG GSR
Sbjct: 285 FDILKEKSQIRCVDEGINL---IKQQFQHRRVLVIMDNIDEEVQLCAIAGSRDWFGPGSR 341

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I++TTRD+R+L        K+Y +  +  +EA E F   AF      E+    S++VVSY
Sbjct: 342 IIITTRDERLLLNV----DKVYPLQEMNEDEAMELFSWHAFGNRWPNEEYLGLSKNVVSY 397

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
             G PL LEVLGS L  +  + W   L  L R   +    I + L+ISF  L  + K+IF
Sbjct: 398 CGGLPLALEVLGSFLFKRTIAEWKSQLEKLKR---APYEKIINPLRISFEGLDDKEKAIF 454

Query: 239 LDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIV 295
           LDI+CFF G+DKD++A ILD    S +  + +L ++ L+++  N                
Sbjct: 455 LDISCFFIGKDKDYIAKILDSCGFSATIGISVLRERCLITVEDN---------------- 498

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNL 354
             +   +PGK SRLW+ +E++ VL +N GT  IEG+ L L    G  +   +AF  M  L
Sbjct: 499 --KFPDQPGKWSRLWNRQEVTDVLTNNSGTGKIEGLALRLPYDYGNTSFITKAFAKMKKL 556

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN- 413
           RL   Y                       V L     +LPK+LR L+W    L+++P + 
Sbjct: 557 RLLMLYA----------------------VDLNGEYKHLPKELRVLNWIFCRLKSIPDDF 594

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           F    LV L +R S + Q WEG K     S+ N K                         
Sbjct: 595 FNQDKLVVLEMRRSSLVQVWEGSK-----SLHNLK------------------------- 624

Query: 474 VTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
            T++ S    L + P  S              +VP       +LE L L+ C  L  I  
Sbjct: 625 -TLDLSSSWYLQKSPDFS--------------QVP-------NLEELILQSCYSLSEIHP 662

Query: 534 SFCKL------RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
           S   L      +S+ TL+L GC +     E + +M  L+ + +D T I E+P S   L  
Sbjct: 663 SIGHLKRLSLSKSVETLLLTGCFDFRELHEDIGEMISLRTLEADHTAIREVPPSIVGLKN 722

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
           L  L + + +K  +LP N+  L  L  +   AS    L + + L   L+ L +  C  LE
Sbjct: 723 LTRLSL-NGNKFRSLP-NLSGLSKLETLWLNAS--RYLCTILDLPTNLKVLLADDCPALE 778

Query: 648 SFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSL 683
           + P      +S M  L +SD A + E+P     L+S+
Sbjct: 779 TMPD--FSEMSNMRELDVSDSAKLTEVPGLDKSLNSM 813



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 115/279 (41%), Gaps = 40/279 (14%)

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
           +L VL+   C RLK I   F     LV L +    +L    E  + + +LK +    +  
Sbjct: 576 ELRVLNWIFC-RLKSIPDDFFNQDKLVVLEMRRS-SLVQVWEGSKSLHNLKTLDLSSSWY 633

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL-------YYILAAASAISQLPSS 628
            +    F  +P LE L ++ C  L  +  +IG L+ L         +L       +L   
Sbjct: 634 LQKSPDFSQVPNLEELILQSCYSLSEIHPSIGHLKRLSLSKSVETLLLTGCFDFRELHED 693

Query: 629 VALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYL 688
           +     LR+L++ H                          A+RE+P  I  L +L  L L
Sbjct: 694 IGEMISLRTLEADHT-------------------------AIREVPPSIVGLKNLTRLSL 728

Query: 689 SGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC- 747
           +GN F SLP  +  +S+L  + L     L ++ +LP  LK L   DC  L+++P      
Sbjct: 729 NGNKFRSLPN-LSGLSKLETLWLNASRYLCTILDLPTNLKVLLADDCPALETMPDFSEMS 787

Query: 748 -LESLDLTGCNMLRSLPELPLCLQ---YLNLEDCNMLRS 782
            +  LD++    L  +P L   L    +++++ C  L +
Sbjct: 788 NMRELDVSDSAKLTEVPGLDKSLNSMVWIDMKRCTNLTA 826



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 122/508 (24%), Positives = 198/508 (38%), Gaps = 108/508 (21%)

Query: 486 EFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLR---GCKRLKRISTSFCKLRSLV 542
           +FP   GK +RL+  +  + +V ++      +E L LR          I+ +F K++ L 
Sbjct: 499 KFPDQPGKWSRLW-NRQEVTDVLTNNSGTGKIEGLALRLPYDYGNTSFITKAFAKMKKLR 557

Query: 543 TLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG-LEVLFVEDCSKLDN 601
            L+L                              +L   +++LP  L VL    C +L +
Sbjct: 558 LLMLYAV---------------------------DLNGEYKHLPKELRVLNWIFC-RLKS 589

Query: 602 LPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMG 661
           +PD+  + + L  +    S++ Q+       + L++LD S    L+  P  F    +   
Sbjct: 590 IPDDFFNQDKLVVLEMRRSSLVQVWEGSKSLHNLKTLDLSSSWYLQKSP-DFSQVPNLEE 648

Query: 662 LLHISDYAVREIPQEIAYLS------SLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDF 714
           L+  S Y++ EI   I +L       S+E L L+G  +F  L   I +M  LR +   D 
Sbjct: 649 LILQSCYSLSEIHPSIGHLKRLSLSKSVETLLLTGCFDFRELHEDIGEMISLRTLE-ADH 707

Query: 715 NMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC--LQYL 772
             ++ +P   + LK                   L  L L G N  RSLP L     L+ L
Sbjct: 708 TAIREVPPSIVGLK------------------NLTRLSLNG-NKFRSLPNLSGLSKLETL 748

Query: 773 NLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEI--LLCLQELDASVLEKLSKHSPDLQ 830
            L     L ++ +LP  L++L   +C  L+++P+   +  ++ELD S   KL++  P L 
Sbjct: 749 WLNASRYLCTILDLPTNLKVLLADDCPALETMPDFSEMSNMRELDVSDSAKLTE-VPGLD 807

Query: 831 WAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSEL 890
              +SL S  +  +   C  L       IL             S  LG            
Sbjct: 808 ---KSLNS-MVWIDMKRCTNLTADFRKNIL---------QGWTSCGLGG----------- 843

Query: 891 RGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFA-FCAVLDSKKVDSDCFRY 949
               I L G+ +PDWF+  + G+ +   + P +   N  G   FC            FR 
Sbjct: 844 ----IALHGNYVPDWFAFVNEGTQVSFDILP-TDDHNFKGLTLFC-----------LFRK 887

Query: 950 FYVSFQFDLEIKTLSETKHVDL-GYNSR 976
                  DL+I  +S TK   L  Y +R
Sbjct: 888 CGRKELPDLKITIISNTKRTKLVAYKTR 915


>gi|82542035|gb|ABB82025.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 735

 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 173/483 (35%), Positives = 255/483 (52%), Gaps = 56/483 (11%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           ++D V+IVGI GM GIGKTT+AK +F+Q  + FEGSCF+S++   S+   GL  LQ+Q+L
Sbjct: 246 ATDHVRIVGIHGMPGIGKTTIAKVVFNQLCYGFEGSCFLSNINETSKQFNGLALLQRQLL 305

Query: 63  STTLSEKLEVAGPNIPH----FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
              L  K + A  N         KER+RR ++++V DDV    QLK L+GE   FG GS 
Sbjct: 306 HDIL--KQDAANINCDDRGKVLIKERLRRKRVVVVADDVAHQDQLKALMGERSWFGPGSI 363

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRD  +L     E  + Y +  L  +E+ + F   A ++    ED    S+ VV Y
Sbjct: 364 VIITTRDSNLLR----EADQTYPIEELTPDESLQLFSWHALRDTKPTEDYIELSKDVVDY 419

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSI 237
             G PL LEV+G+ L  K +  W  V+  L RI      DI   L+ISF+ L    +++ 
Sbjct: 420 CGGLPLALEVMGACLSGKNRDGWKSVIDKLRRIPN---RDIQGKLRISFDSLDGEELQNA 476

Query: 238 FLDIACFFEGEDKDFVASILD-----DSESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
           FLDIACFF    K++VA +L      + E D L  L ++SL+ + G  + MHD+L++MGR
Sbjct: 477 FLDIACFFIDRRKEYVAKVLGARCGYNPEVD-LQTLHERSLIKVLGETVTMHDLLRDMGR 535

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           ++VR+ S KEPGKR+R+W+  +   VL+  KGTD +EG+ LD+   +  +L   +F  M 
Sbjct: 536 EVVRESSPKEPGKRTRIWNQGDAWNVLEQQKGTDVVEGLALDVRASEAKSLSAGSFAEMK 595

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            L L                      L  + V L      L K+L ++ W   PL+  PS
Sbjct: 596 CLNL----------------------LQINGVHLTGSFKLLSKELMWICWLQCPLKYFPS 633

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY--------------LSALSFKGC 458
           +F   NL  L+++ S +++ W+G+K      I N  +              L  L  KGC
Sbjct: 634 DFTLDNLAVLDMQYSNLKELWKGKKILNRLKILNLSHSQHLIKTPNLHSSSLEKLILKGC 693

Query: 459 QSL 461
            SL
Sbjct: 694 SSL 696


>gi|359493410|ref|XP_002279970.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1212

 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 214/649 (32%), Positives = 298/649 (45%), Gaps = 139/649 (21%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNIP 78
           KTTLA+A++++ S +FE   F+ DV G      GL  LQ+  L   L EK L   G    
Sbjct: 360 KTTLARALYNEISRQFEAHSFLEDV-GKVLVNKGLIKLQQIFLYDLLEEKDLNTKGFT-- 416

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
            F K R+   K L+VLD+VN+   L+ L+G  D FG+GSRI++T RDK +L         
Sbjct: 417 -FIKARLHSKKALVVLDNVNDPKILECLVGNWDWFGRGSRIIITARDKHLL---IAHGVL 472

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
            Y+V    ++EA+      + K      D    S+ ++ Y KG PL L+VL SSL    K
Sbjct: 473 CYQVPTFNYDEAYGFIKRHSLKHELLIGDFLELSKEMIDYAKGLPLALKVLCSSLFGMSK 532

Query: 199 SHWGKVLHDLNRICESEIHD-IYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
                 L  L    +S +H  I ++L+IS++ L  + K+IFLDIACFF+GEDKD+V  IL
Sbjct: 533 KERRNQLDKL----KSTLHKKIEEVLRISYDGLDDKEKNIFLDIACFFKGEDKDYVIEIL 588

Query: 258 DDS---ESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKE 314
           D      S  +  L++KSL+SI GN L MHD++QEMG +IVRQ+  +E GKRSRLW  ++
Sbjct: 589 DGCGFFSSCGIRTLVNKSLISIYGNKLEMHDLIQEMGIEIVRQQFVQELGKRSRLWFHED 648

Query: 315 ISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMS 374
           I  VLK N G++ IEG+FL                       F  Y              
Sbjct: 649 IIDVLKKNTGSEKIEGLFLS--------------------SYFDLY-------------- 674

Query: 375 TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
                 YS   LPN                        +F  KNLV L++ CS ++Q W+
Sbjct: 675 -----GYSLKSLPN------------------------DFNAKNLVHLSMPCSHIKQLWK 705

Query: 435 GEKA----------------------------------CVP-----SSIQNFKYLSALSF 455
           G K                                   CV       S+++ K L+ LSF
Sbjct: 706 GIKVLEKLKCMDLSHSKYLIETPNLSRVTNLERLVLEDCVSLCKVHPSLRDLKNLNFLSF 765

Query: 456 KGCQSLRSFPSNLH-FVCPVTINFSYCVNLIEFPQISG---KVTRLYLGQSAIEEVPSSI 511
           K C+ L+S PS  +      T+  S C    +FP+  G    + +LY   +A+ E+PSS+
Sbjct: 766 KNCKMLKSLPSGPYDLKSLATLILSGCSKFEQFPENFGYLEMLKKLYADGTALRELPSSL 825

Query: 512 ECLTDLEVLDLRGCK----------RLKRISTSF-----CKLRSLVTLILLGC-LNLEHF 555
             L +LE+L   GCK          R    ST F       L SL  L L  C L+ E  
Sbjct: 826 SSLRNLEILSFVGCKGPPSASWLFPRRSSNSTGFILHNLSGLCSLRKLDLSDCNLSDETN 885

Query: 556 PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
              L  +  LK +Y        LP +   L  LE   + +C++L  LPD
Sbjct: 886 LSCLVYLSSLKDLYLCENNFVTLP-NLSRLSRLERFRLANCTRLQELPD 933



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 130/259 (50%), Gaps = 19/259 (7%)

Query: 502 SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
           S I+++   I+ L  L+ +DL   K L   + +  ++ +L  L+L  C++L      L  
Sbjct: 698 SHIKQLWKGIKVLEKLKCMDLSHSKYLIE-TPNLSRVTNLERLVLEDCVSLCKVHPSLRD 756

Query: 562 MEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAAS 620
           +++L  + + +   +  LPS   +L  L  L +  CSK +  P+N G LE L  + A  +
Sbjct: 757 LKNLNFLSFKNCKMLKSLPSGPYDLKSLATLILSGCSKFEQFPENFGYLEMLKKLYADGT 816

Query: 621 AISQLPSSVALSNMLRSLDSSHCKGLES----FPR------TFLL----GLSAMGLLHIS 666
           A+ +LPSS++    L  L    CKG  S    FPR       F+L    GL ++  L +S
Sbjct: 817 ALRELPSSLSSLRNLEILSFVGCKGPPSASWLFPRRSSNSTGFILHNLSGLCSLRKLDLS 876

Query: 667 DYAVREIPQE--IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
           D  + +      + YLSSL+ LYL  NNF +LP  + ++S+L    L +   LQ LP+LP
Sbjct: 877 DCNLSDETNLSCLVYLSSLKDLYLCENNFVTLPN-LSRLSRLERFRLANCTRLQELPDLP 935

Query: 725 LCLKYLHLIDCKMLQSLPV 743
             +  +   +C  L+++ +
Sbjct: 936 SSIVQVDARNCTSLKNVSL 954



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 142/587 (24%), Positives = 231/587 (39%), Gaps = 108/587 (18%)

Query: 486  EFPQISGKVTRLYLGQSAIEEVPSS-----IECLTDLEVLDLRGCKRLKRISTSFCKLRS 540
            +F Q  GK +RL+  +  I+ +  +     IE L      DL G   LK +   F   ++
Sbjct: 632  QFVQELGKRSRLWFHEDIIDVLKKNTGSEKIEGLFLSSYFDLYGYS-LKSLPNDF-NAKN 689

Query: 541  LVTLILLGCLNLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
            LV L +  C +++   + ++ +E LK +  S    + E P+    +  LE L +EDC  L
Sbjct: 690  LVHLSM-PCSHIKQLWKGIKVLEKLKCMDLSHSKYLIETPN-LSRVTNLERLVLEDCVSL 747

Query: 600  DNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
              +  ++  L+ L ++       +  LPS       L +L  S C   E FP  F   L 
Sbjct: 748  CKVHPSLRDLKNLNFLSFKNCKMLKSLPSGPYDLKSLATLILSGCSKFEQFPENFGY-LE 806

Query: 659  AMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
             +  L+    A+RE+P  ++ L +LEIL   G      P     +   R  +   F +L 
Sbjct: 807  MLKKLYADGTALRELPSSLSSLRNLEILSFVGCKG---PPSASWLFPRRSSNSTGF-ILH 862

Query: 719  SLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCN 778
            +L  L   L+ L L DC +           +  +L+    L SL +L LC         N
Sbjct: 863  NLSGL-CSLRKLDLSDCNLS----------DETNLSCLVYLSSLKDLYLCE--------N 903

Query: 779  MLRSLPELPLCLQLLTVR--NCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESL 836
               +LP L    +L   R  NC RLQ LP++   + ++DA                  SL
Sbjct: 904  NFVTLPNLSRLSRLERFRLANCTRLQELPDLPSSIVQVDAR--------------NCTSL 949

Query: 837  KSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIV 896
            K+ ++    +  LK      N+++ D              L + +A+           I+
Sbjct: 950  KNVSLRNVQSFLLK------NRVIWD--------------LNFVLALE----------IL 979

Query: 897  LPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQF 956
             PGS +PDW   QSSG  +  +L P+    N +GF F  V+  K  +    R+ Y     
Sbjct: 980  TPGSRLPDWIRYQSSGKEVIAELSPNWFNSNFLGFGFANVV-PKFSNLGLSRFVYC---- 1034

Query: 957  DLEIKTLSETKHVDLGYNSRYI---------EDLIDSDRVILGFKPCLNV------GFPD 1001
                  LS ++  D  +  R +           ++  D V L + P  +       G   
Sbjct: 1035 -----YLSLSRSSDFTHGFRVVPYPHFLCLNRQMLTLDHVYLLYVPLSSFSDWCPWGHII 1089

Query: 1002 GYHHTIATFKFFAER--KFYKIKRCGLCPVYANPSETKDNTFTINFA 1046
             +H        F  R  +F ++KR G+   Y+N     +N   I F 
Sbjct: 1090 NWHQVTHIKASFQPRSDQFGEVKRYGIGLAYSNEDVNHNNPPMIQFG 1136


>gi|224126759|ref|XP_002329466.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870146|gb|EEF07277.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 515

 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 149/325 (45%), Positives = 207/325 (63%), Gaps = 11/325 (3%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S  V +VGI G+GG GKTT+AKA+++  +++FE  CF+S+VR  S+  G L HLQ+++L
Sbjct: 192 GSSNVCMVGICGLGGSGKTTVAKAVYNLINNQFEACCFLSNVREFSKRYG-LVHLQEKLL 250

Query: 63  STTLSEKLEVAGP--NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
              L +K  V G      +  K+R+R  K+LIV+DDV+ + QLK++ GE D FG GS+I+
Sbjct: 251 FEILGDKTLVLGSVDRGINVIKDRLRHKKVLIVIDDVDHLDQLKQIAGERDWFGLGSKII 310

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRD+R+L  F G E+ + RV  L  ++A   FC  AF+ +H P D    S  VV Y+K
Sbjct: 311 ITTRDERLL-VFHGVER-LLRVKELCCDDALMLFCWHAFRNSHPPIDYLEISDQVVKYSK 368

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL L VLGS L  +        L  L RI   +I   Y++LKISF+ L    ++IFLD
Sbjct: 369 GLPLALVVLGSFLYGRSIPERESELDKLRRIPNKQI---YEVLKISFDGLEHHERAIFLD 425

Query: 241 IACFFEGEDKDFVASILDDSESD---VLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
           IACFF+G++KD+V  ILD  + D    + +L++KSLV I  N L MHD+LQ MGRQ+V Q
Sbjct: 426 IACFFKGQEKDYVIKILDACDFDPVIGIQVLMEKSLVYIENNKLQMHDLLQWMGRQVVHQ 485

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHN 322
           ES   PG+RSRLW  ++I  VL  N
Sbjct: 486 ESPNVPGRRSRLWFHEDILHVLTEN 510


>gi|357499539|ref|XP_003620058.1| Resistance protein [Medicago truncatula]
 gi|355495073|gb|AES76276.1| Resistance protein [Medicago truncatula]
          Length = 1907

 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 196/641 (30%), Positives = 293/641 (45%), Gaps = 134/641 (20%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE 68
           +VGI+G+GG+GK+TLA+AI++  + +FEG CF+ DVR NS     L+HLQ+++L  T   
Sbjct: 1   MVGIFGIGGLGKSTLARAIYNFVADQFEGLCFLHDVRENS-AQNDLKHLQEKLLLKTTGS 59

Query: 69  KLEV--AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGEL---------------- 110
           K+++      IP F KER+ R K+L++LDDV++  QL  L G L                
Sbjct: 60  KIKLDHVCEGIP-FIKERLCRKKILLILDDVDDRKQLHALAGGLALVEKAKLVTEKMKFL 118

Query: 111 ----------------------------------DQFGQGSRIVVTTRDKRVLEKFRGEE 136
                                             D FG GSR+++TTR+K +L   R E 
Sbjct: 119 TNSMVAKFSDGIREGFHVFPHKISLTNFCFFSSVDWFGPGSRVIITTRNKHLLASHRIE- 177

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
            K Y V GL   +A E     AFK ++ P          V+Y  G PLVLEV+GS+L  K
Sbjct: 178 -KTYPVEGLNGIDALELLRWMAFKNDNVPSGYEDILNRAVAYASGLPLVLEVMGSNLFGK 236

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEG----EDKDF 252
               W   L   +RI   EI  I   L++S++ L    +S+FLDIAC  +G    E ++ 
Sbjct: 237 NIEEWKNTLDGYDRIPNKEIQKI---LRVSYDALEEEEQSVFLDIACCLKGYRLTEVENI 293

Query: 253 VASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           + S  D   +  L +L +KSL+  +  ++ +H+++++MG+++VRQES KEPG+RSRL   
Sbjct: 294 LHSHYDHCITHHLRVLAEKSLIDTNYCYVTLHNLIEDMGKEVVRQESIKEPGERSRLCCH 353

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
            +I  VLK N GT  I+ ++++   ++ I +D +                 F ++ +L +
Sbjct: 354 DDIVNVLKENTGTSKIQMMYMNFHSMESI-IDQKGMA--------------FKKMTRLKT 398

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
           +  E            GL YLP  L+ L W+                      C      
Sbjct: 399 LIIENG------HCSKGLKYLPSSLKALKWEG---------------------CLSKSLS 431

Query: 433 WEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG 492
                   P        ++ L+   C+ L   P          ++F YC NLI       
Sbjct: 432 SSILSKKFPD-------MTVLTLDHCKYLTHIPDVSGLSNLEKLSFEYCDNLIT------ 478

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
                         + +SI  L  LE L   GC+  KR       L SL  L L  C +L
Sbjct: 479 --------------IHNSIGHLNKLERLSAFGCREFKRFPP--LGLASLKELNLRYCESL 522

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
           + FPE+L KM ++  I+   T I ELP SF+NL  L+ L V
Sbjct: 523 DSFPELLCKMTNIDNIWLQHTSIGELPFSFQNLSELDELSV 563



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 150/384 (39%), Positives = 228/384 (59%), Gaps = 23/384 (5%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S D V +VGI+G+GG+GK+TLA+AI++  + +FEG CF+ +VR NS     LEHLQ+++L
Sbjct: 956  SDDGVHMVGIFGIGGLGKSTLARAIYNLVADQFEGLCFLHNVRMNS-AKNNLEHLQEKLL 1014

Query: 63   -STTLSE-KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
              TT SE  L+     IP   KER+ R K+L++LDDV+++ QL+ L G LD FG GSR++
Sbjct: 1015 FKTTGSEINLDHVSDGIP-IIKERLCRKKILLILDDVDKLDQLQALAGGLDWFGPGSRVI 1073

Query: 121  VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            +TTRDK +L+    E  K Y V GL   EA E     AFK ++ P          VSY  
Sbjct: 1074 ITTRDKHLLDHHGIE--KTYAVKGLNGTEALELLRWMAFKSDNVPSRYKEILSRAVSYVS 1131

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
            G PLV+E++GS+L  K    W  +L   +RI   EI     IL++S++ L    +S+FLD
Sbjct: 1132 GLPLVIEIVGSNLFGKNIEEWKYILDGYDRIPNKEIQ---KILRVSYDALEEEEQSVFLD 1188

Query: 241  IACFFEG---EDKDFV-ASILDDSESDVLDILIDKSLVSISGNF--LNMHDILQEMGRQI 294
            IAC F+G   ED  ++  +    S +  L +L +KSL++    +  + +HD++++MG+++
Sbjct: 1189 IACCFKGHGWEDAKYMLHAHYGHSITHHLAVLAEKSLINQYREYGCVTLHDLIEDMGKEV 1248

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLD----LSKIKGI----NLDPR 346
            VRQES KEPG+RSRL    +I+RVL+ N     ++ + LD    L+ I  +    NL+  
Sbjct: 1249 VRQESTKEPGERSRLCCQDDITRVLRENTKFQNMKILTLDDCEYLTHIPDVSSLSNLEKL 1308

Query: 347  AFTNMSNLRLFKFYVPKFYEIEKL 370
            +F +  NL      +    ++E+L
Sbjct: 1309 SFEHCKNLITIHNSIGHLSKLERL 1332



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 29/177 (16%)

Query: 424  LRCSKVEQPWEGEKACVPSSIQ-------NFKYLSALSFKGCQSLRSFPSNLHFVCPVTI 476
            +R    ++P E  + C    I         F+ +  L+   C+ L   P          +
Sbjct: 1249 VRQESTKEPGERSRLCCQDDITRVLRENTKFQNMKILTLDDCEYLTHIPDVSSLSNLEKL 1308

Query: 477  NFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFC 536
            +F +C NLI                     + +SI  L+ LE L + G ++LK       
Sbjct: 1309 SFEHCKNLIT--------------------IHNSIGHLSKLERLSVTGYRKLKHFPP--L 1346

Query: 537  KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
             L SL  L L+G   LE+FPE+L KM H+K I      I +LP SF+NL  L+   V
Sbjct: 1347 GLASLKELNLMGGSCLENFPELLCKMAHIKEIDIFYISIGKLPFSFQNLSELDEFTV 1403


>gi|297815270|ref|XP_002875518.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321356|gb|EFH51777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1080

 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 216/689 (31%), Positives = 333/689 (48%), Gaps = 73/689 (10%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRG------NSETAGGLEHL 57
           SD V+++GIWG  GIGKT +A+ +F+QF+  FE S FV +++        S+      H+
Sbjct: 245 SDEVRMIGIWGPSGIGKTIIARVLFNQFNGSFELSVFVENIKELMCRPLCSDDYSTKLHI 304

Query: 58  QKQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           Q+Q +S   + K +E+    +    ++ +   K+L+VLD++++  QL  +  E   FGQG
Sbjct: 305 QRQFMSQITNHKEMEICHLGV---VQDMLHDKKVLVVLDNIDQSIQLDAIAKETCWFGQG 361

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP---EDLNWHSR 173
           SRI++TT D+++L K   +   IY+V      EA + FC +AF +       EDL W   
Sbjct: 362 SRIIITTHDQKLL-KAHDDINHIYKVGFPSASEACQIFCMYAFGQKFPKDGFEDLAWQ-- 418

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            V     G PL L V+GS      K  W   L  L    +S I     ILK S++ L   
Sbjct: 419 -VTKLLGGLPLGLRVMGSHFRGMSKEEWINALPRLKTRLDSSIQ---SILKFSYDALWDE 474

Query: 234 VKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEM 290
            K +FL IAC F  +    V   L     DV   L +L +K L+SI   ++ MH++L+++
Sbjct: 475 DKDLFLHIACLFNNKRTSKVEEHLAHKFLDVRQGLYVLAEKCLISIDTEWIKMHNLLEQL 534

Query: 291 GRQIVRQE----SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDP 345
           G++IVR E    S  +PGKR  L D ++I  VL  + G+ ++ GI  D S++ G +N+  
Sbjct: 535 GKEIVRHEPGHQSICDPGKRQLLVDARDICEVLTDDTGSSSVIGIHFDPSELLGELNISE 594

Query: 346 RAFTNMSNLRLFKF-----------YVPKFYEI--EKLPSMSTEEQLSYSKVQLPNGLDY 392
            AF  MSNL+  +F           Y+PK   +   KL +M       +S V       +
Sbjct: 595 GAFEGMSNLKFLRFKCTYGDQSDKLYLPKGLSLLSPKLTTMGL-----FSDVMF--AFQF 647

Query: 393 LPKKLRYLHWDTYP----LRTLPSNFKPKNLVELNL-RCSKVEQPWEGEKACVPSSIQNF 447
           L + L  L W        L+ LP+      L EL L  C+ + +        +PSSI N 
Sbjct: 648 LYEPLENLKWMVLSYSKNLKELPNLSTATKLQELFLIDCTSLVE--------LPSSIGNA 699

Query: 448 KYLSALSFKGCQSLRSFPSNLHFVCPVT-INFSYCVNLIEFPQISGKVTRLYLGQ----S 502
             L  L    C+S+   PS       ++ +N S C +L+E P   G  T L +      +
Sbjct: 700 ISLQTLHLGECKSIVELPSCFGNAINLSWLNLSGCSSLVELPSSIGNATNLEILHMDMCT 759

Query: 503 AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM 562
            + ++PSSI  L  L    L+GC +L+ + T+   L SL  L L  CL L+ FPEI   +
Sbjct: 760 DVVKLPSSIGNLYKLREFTLKGCLKLEILPTNI-NLESLDELNLTDCLLLKRFPEISTNI 818

Query: 563 EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAI 622
           +HL   Y + T + E+PSS ++   L+ L +     L   P  +  +  LY        +
Sbjct: 819 KHL---YLNGTAVEEVPSSIKSWSRLDDLHMSYSESLKKFPHALDIITTLY---VNDLEM 872

Query: 623 SQLPSSVALSNMLRSLDSSHCKGLESFPR 651
            ++P  V   + LR L  + CK L S P+
Sbjct: 873 HEIPLWVTKISCLRGLKLNGCKKLVSLPQ 901



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 150/355 (42%), Gaps = 70/355 (19%)

Query: 478 FSYCVNLIEFPQISG--KVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            SY  NL E P +S   K+  L+L   +++ E+PSSI     L+ L L  CK +  + + 
Sbjct: 660 LSYSKNLKELPNLSTATKLQELFLIDCTSLVELPSSIGNAISLQTLHLGECKSIVELPSC 719

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
           F    +L  L L GC                       + + ELPSS  N   LE+L ++
Sbjct: 720 FGNAINLSWLNLSGC-----------------------SSLVELPSSIGNATNLEILHMD 756

Query: 595 DCSKLDNLPDNIGSLEYLY-YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF 653
            C+ +  LP +IG+L  L  + L     +  LP+++ L + L  L+ + C  L+ FP   
Sbjct: 757 MCTDVVKLPSSIGNLYKLREFTLKGCLKLEILPTNINLES-LDELNLTDCLLLKRFP--- 812

Query: 654 LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLED 713
                             EI   I +L      YL+G   E +P+ IK  S+L  +H+  
Sbjct: 813 ------------------EISTNIKHL------YLNGTAVEEVPSSIKSWSRLDDLHMSY 848

Query: 714 FNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF---CLESLDLTGCNMLRSLPELPLCLQ 770
              L+  P     +  L++ D +M   +P+      CL  L L GC  L SLP+LP  L 
Sbjct: 849 SESLKKFPHALDIITTLYVNDLEM-HEIPLWVTKISCLRGLKLNGCKKLVSLPQLPDSLS 907

Query: 771 YLNLEDCNMLRSL------PELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVL 819
           YL   +C  L  L      P++      L   NC +L      L+     D +VL
Sbjct: 908 YLEAVNCESLERLDFSFYNPKI-----YLNFVNCFKLNKEARELIIQTSTDYAVL 957



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 183/456 (40%), Gaps = 88/456 (19%)

Query: 490  ISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC 549
            +S K+T + L    +       E L +L+ + L   K LK +  +      L  L L+ C
Sbjct: 628  LSPKLTTMGLFSDVMFAFQFLYEPLENLKWMVLSYSKNLKELP-NLSTATKLQELFLIDC 686

Query: 550  LNLEHFPEILEKMEHLKRIY-SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGS 608
             +L   P  +     L+ ++  +   I ELPS F N   L  L +  CS L  LP +IG+
Sbjct: 687  TSLVELPSSIGNAISLQTLHLGECKSIVELPSCFGNAINLSWLNLSGCSSLVELPSSIGN 746

Query: 609  ---LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHI 665
               LE L+  +   + + +LPSS+     LR      C  LE  P    + L ++  L++
Sbjct: 747  ATNLEILH--MDMCTDVVKLPSSIGNLYKLREFTLKGCLKLEILPTN--INLESLDELNL 802

Query: 666  SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL 725
            +D  + +   EI+  ++++ LYL+G   E +P+ IK  S+L  +H+     L+  P    
Sbjct: 803  TDCLLLKRFPEIS--TNIKHLYLNGTAVEEVPSSIKSWSRLDDLHMSYSESLKKFPHALD 860

Query: 726  CLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPE 785
             +  L++ D +M                          E+PL +  ++            
Sbjct: 861  IITTLYVNDLEM-------------------------HEIPLWVTKIS------------ 883

Query: 786  LPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEF 845
               CL+ L +  C +L SLP++   L  L+A   E L +          S  +  I   F
Sbjct: 884  ---CLRGLKLNGCKKLVSLPQLPDSLSYLEAVNCESLER-------LDFSFYNPKIYLNF 933

Query: 846  TNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDW 905
             NC KLN +A   I+  S                                VLPG E+P  
Sbjct: 934  VNCFKLNKEARELIIQTS----------------------------TDYAVLPGGEVPAK 965

Query: 906  FSNQSS-GSSICIQLPPHSSCRNLIGFAFCAVLDSK 940
            F+ +++ G+S+ + L  H        F  C +L +K
Sbjct: 966  FTYRANRGNSMIVNL-NHRPLSTTSRFKACILLVNK 1000


>gi|13509215|emb|CAC35327.1| N1-A protein [Linum usitatissimum]
          Length = 1008

 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 242/809 (29%), Positives = 366/809 (45%), Gaps = 99/809 (12%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S + +I+GI+GMGG+GKTTLAKA++++ S +FE  CF++++R       G+  LQ +++S
Sbjct: 228 STSEKIIGIYGMGGLGKTTLAKAVYNKVSMQFERCCFLNNIREALLKNDGVVALQNKVIS 287

Query: 64  TTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             L +    A    +     +ERV R K+ +VLDDVNE  +   + G+L  F   SR +V
Sbjct: 288 DILRKDFGQAKNASDGVQMIRERVSRHKIFVVLDDVNESFRFDDIFGKLTAFSADSRFLV 347

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRD R LE+ RG   K+++  G+  + + + F   AF  ++ PED        V    G
Sbjct: 348 TTRDARTLERLRG--CKLFKHEGMSHDHSLKLFSKHAFGVDYPPEDYASLCEEFVQVGSG 405

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L+V+GS L    KS W   L +L  I   E+    D LKIS+N+LT   K IFLD+
Sbjct: 406 LPLALKVIGSLLFRTEKSFWEDKLIELKAIPAVEVQ---DRLKISYNELTDNEKQIFLDV 462

Query: 242 ACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIVRQ 297
           ACFF G  K+    +  D     +  +  L+ +SLV I+ N    MHD ++++GR IVR+
Sbjct: 463 ACFFVGAKKEIPMYMWSDCGFYPTTTIRTLVQRSLVRINDNEEFWMHDHIRDLGRAIVRE 522

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
           ES+  P KRSR+W   +   +LK+ +G D +E + +D+ + +G  L    F   S LR  
Sbjct: 523 ESQN-PYKRSRIWSNNDAIDILKNREGNDCVEALRVDM-RGEGFALTDEEFKQFSRLR-- 578

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
                 F E+     ++ +   ++  V LP+      + LR  H D       PS     
Sbjct: 579 ------FLEV-----LNGDLSGNFKNV-LPS-----LRWLRVYHGDPR-----PSGLNLN 616

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
            L+ L L  S V   WEG      + I+    L  +    C+ L   P          + 
Sbjct: 617 KLMILELEVSDVTDSWEGW-----NEIKAAGKLKVVHLMCCKGLEKVPDLSTCRGLELLR 671

Query: 478 FSYCVNL-------------------IEFPQISGKV------TRLYLGQSAIEEVPSSIE 512
           FS C  +                        + G+V       +L +G S + EVP+ I 
Sbjct: 672 FSICRRMHGELDIGNFKDLKVLDIFQTRITALKGQVESLQNLQQLDVGSSGLIEVPAGIS 731

Query: 513 CLTDLEVLDL------------RGCKRLKRISTSFCKL-RSLVTLILLGCLNLEHFPEIL 559
            L+ LE L+L             G K L   S S   L  SL  L +    NL   P  L
Sbjct: 732 KLSSLEYLNLTNIKHDKVETLPNGLKILLISSFSLSALPSSLFRLDVRYSTNLRRLPN-L 790

Query: 560 EKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAA 619
             + +L R+  +   I  +P   E L  LE LF+ D   LDNL D + +L  L  +    
Sbjct: 791 ASVTNLTRLRLEEVGIHGIPGLGE-LKLLECLFLRDAPNLDNL-DGLENLVLLKELAVER 848

Query: 620 SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
             I +   S+A    L  L    C  L        LG  ++  L IS      + + +  
Sbjct: 849 CRILEKLPSLAELTKLHKLVIGQCNILGEICGLGNLG-ESLSHLEISGCPCLTVVESLHS 907

Query: 680 LSSLEILYLSGNNFES-LPAIIKQMSQLRFI-----HLEDFNMLQSLPELPLC------- 726
           L +L  L LSG    + LP  +   ++L+ +      L D   L++L  L +C       
Sbjct: 908 LLNLGTLELSGYGITNILPPSLSIYTKLKSLKVYDSQLPDLTNLKNLRCLKICGCDNFIE 967

Query: 727 LKYLHLIDCKMLQSLPVLPFCLESLDLTG 755
           +  LH ++   L+ L V+   +  LDLTG
Sbjct: 968 ITGLHTLES--LEELRVMGSSIRKLDLTG 994


>gi|357468499|ref|XP_003604534.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505589|gb|AES86731.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1302

 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 194/570 (34%), Positives = 279/570 (48%), Gaps = 95/570 (16%)

Query: 56   HLQKQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
            ++++  +STT ++ L +      H    ++ R    I+  DV E  QL+ L G LD F  
Sbjct: 562  NIRQPPVSTTGTQNLTL------HMYHWKINRKARPIIPIDVKEENQLEILFGTLDWFRS 615

Query: 116  GSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSV 175
             SRI+VT RDK+VL     E   IY V  L + EA E F   AF ++H   +    S+ V
Sbjct: 616  DSRIIVTIRDKQVL--ITNEVDDIYEVGVLNYSEALELFNLNAFNQSHLEMEYYELSKKV 673

Query: 176  VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
            + Y KG PLVL+VL   L  K K  W   L  L R+   +  D+   +++S++ L    +
Sbjct: 674  IDYAKGIPLVLKVLAHLLRGKDKEEWESQLDKLKRLPNKKFQDV---MRLSYDDLDRLEQ 730

Query: 236  SIFLDIACFFEGE--DKDFVASILDDSESD-----VLDILIDKSLVSIS-GNFLNMHDIL 287
              FLDIACFF G     D++  +L D ESD      L+ L DKSL++IS  N ++MHDIL
Sbjct: 731  KYFLDIACFFNGLRLKVDYMKLLLKDFESDNAVAVGLERLKDKSLITISEDNVISMHDIL 790

Query: 288  QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA 347
            QEMGR++VRQES ++P K SRL +P  I  VLK++KGTDAI  I LDLS  + + L P  
Sbjct: 791  QEMGREVVRQESSEDPRKCSRLSNPDIIYDVLKNDKGTDAIRSISLDLSASRKLKLSPNV 850

Query: 348  FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
            F  M+NL+        F +I+ L              ++P G+   P  L+YLHW  YPL
Sbjct: 851  FDKMTNLQFL-----DFRDIDGLD-------------RIPEGIQSFPTDLKYLHWICYPL 892

Query: 408  RTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFK------------------- 448
            ++L   F  +NLV L+L  S +E+ W G +      + N K                   
Sbjct: 893  KSLSEKFSAENLVILDLSGSLLEKLWCGVQIIEYQDLVNLKEVTLSHSGFLKVIPDFSKA 952

Query: 449  -YLSALSFKGCQSLRSFPSNL--------------HFVCPVTINFSYCVNLIEFPQIS-- 491
              L+ L+ +GC  L S   ++                + P T N     NL     +S  
Sbjct: 953  TNLNVLNIQGCYGLTSIHPSIFSLDKLLKLDLSLCLSLAPFTTN----SNLSSLHYVSAI 1008

Query: 492  ------------GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
                        GK+  L L  +AIE +PSSI+ LT L  LD+R C +L     +  +L 
Sbjct: 1009 PPDALPSSFGFLGKLEILDLVFTAIESIPSSIKNLTRLRKLDIRFCSKL----VALPELP 1064

Query: 540  SLVTLILLGCLNLE--HFPEILEKMEHLKR 567
            S V  +L+ C +L+   FP ++  M+   R
Sbjct: 1065 SSVETLLVECESLKTVFFPSVINLMKFAYR 1094



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 108/250 (43%), Gaps = 33/250 (13%)

Query: 520  LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM-EHLKRIYSDRTPITEL 578
            LDL   ++LK     F K+ +L  L       L+  PE ++     LK ++    P+  L
Sbjct: 836  LDLSASRKLKLSPNVFDKMTNLQFLDFRDIDGLDRIPEGIQSFPTDLKYLHWICYPLKSL 895

Query: 579  PSSF--ENLPGLEVLFVEDCSKLDNLPDNIGSLEY-----LYYILAAASAISQLPSSVAL 631
               F  ENL  L++      S L+ L   +  +EY     L  +  + S   ++    + 
Sbjct: 896  SEKFSAENLVILDL----SGSLLEKLWCGVQIIEYQDLVNLKEVTLSHSGFLKVIPDFSK 951

Query: 632  SNMLRSLDSSHCKGLESF-PRTFLLGL------------------SAMGLLH-ISDYAVR 671
            +  L  L+   C GL S  P  F L                    S +  LH +S     
Sbjct: 952  ATNLNVLNIQGCYGLTSIHPSIFSLDKLLKLDLSLCLSLAPFTTNSNLSSLHYVSAIPPD 1011

Query: 672  EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
             +P    +L  LEIL L     ES+P+ IK +++LR + +   + L +LPELP  ++ L 
Sbjct: 1012 ALPSSFGFLGKLEILDLVFTAIESIPSSIKNLTRLRKLDIRFCSKLVALPELPSSVETL- 1070

Query: 732  LIDCKMLQSL 741
            L++C+ L+++
Sbjct: 1071 LVECESLKTV 1080


>gi|357513735|ref|XP_003627156.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521178|gb|AET01632.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1473

 Score =  240 bits (613), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 224/805 (27%), Positives = 368/805 (45%), Gaps = 127/805 (15%)

Query: 10  VGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK 69
           +GIWGMGG+GKT +AK +F +   +++  CF          A   E+   ++ S  L E 
Sbjct: 203 LGIWGMGGMGKTIIAKVLFAKLFAQYDHVCF----------ANAKEYSLSKLFSELLKE- 251

Query: 70  LEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRV 128
            E++  N+   F   R+R  K+LIVLD+++ + Q + L  +  +  + SR+++TTRD+++
Sbjct: 252 -EISPSNVGSAFHMRRLRSRKVLIVLDNMDSLDQFEYLCRDYGELNKDSRLIITTRDRQL 310

Query: 129 LEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEV 188
           L    G    IY V   E+ ++ E FC  AF+ ++  E      +  ++Y  G PL L++
Sbjct: 311 LS---GRVDWIYEVKQWEYPKSLELFCLEAFEPSNPREKYEHLLQRAITYAGGVPLALKL 367

Query: 189 LGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGE 248
           L   L  +  + W      L+   + ++H +   LK+S+++L    K IFLDIA FF GE
Sbjct: 368 LALHLRTRDIAFWESSFKKLDDHRDDKLHKV---LKVSYDELDALEKKIFLDIAFFFIGE 424

Query: 249 DKDFVASILD----DSESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIVRQESEKEP 303
            K+ V  ILD    +  S ++ +L DK+L++IS N  + MHD+LQ+MG  I+  +  ++P
Sbjct: 425 KKESVTKILDACGFEPNSGIV-VLKDKALITISNNQTIQMHDLLQKMGSDIICNDCGEDP 483

Query: 304 GKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPK 363
              +RL   K  + V++ NKG+ +IEGI LDLS+   + L    FT M  LR+ KF+ P 
Sbjct: 484 AAHTRLSGSKARA-VIEENKGSSSIEGITLDLSQNNDLPLSADTFTKMKALRILKFHAP- 541

Query: 364 FYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELN 423
                     S  ++ + + + LP  L+    KLRY  W+ YP  +LP +F  K LVE+ 
Sbjct: 542 ----------SNLQRCTNTYLNLPKFLEPFSNKLRYFEWNGYPFESLPQHFYAKFLVEIR 591

Query: 424 LRCSKVEQPWEGEKACVP------------SSIQNFKYLSALSF---KGCQSL------- 461
           +  S V+Q W+G K                  + NF   S+L +    GC+SL       
Sbjct: 592 MPHSNVKQLWQGTKELGKLEGIDLSECKQFEKLPNFSKASSLKWVNLSGCESLVDLHPSV 651

Query: 462 -----------------RSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAI 504
                            R      H      I+   C +L EF   S  +  L L  + I
Sbjct: 652 LCADTLVTLILDRCTKVRRVRGEKHLNFLEKISVDGCKSLEEFAVSSDLIENLDLSSTGI 711

Query: 505 EEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEH 564
           + +  SI  L  L+ L+L    RL RI      +RS+  L + G                
Sbjct: 712 KTLDLSIGRLQKLKQLNLESL-RLNRIPKELSSVRSIRELKISGS--------------- 755

Query: 565 LKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQ 624
             R+  ++  + EL   F+ L  L++L ++D      LP+N+     L  +    S +  
Sbjct: 756 --RLIVEKKQLHEL---FDGLQSLQILHMKDFINQFELPNNVHVASKLMELNLDGSNMKM 810

Query: 625 LPSSVALSNMLRSLDSSHCKGLESFPR-----TFLLGLSAMGLLHISD---YAVREI--P 674
           LP S+     L  L   +C+ LE  P      T L  ++   L+ +S+    A + I   
Sbjct: 811 LPQSIKKLEELEILSLVNCRKLECIPELPPLITLLNAVNCTSLVSVSNLKKLATKMIGKT 870

Query: 675 QEIAYLSSLEI------LYLSGNNFESLPAIIKQMSQLRF-IHLEDFNMLQSLPELPLCL 727
           + I++ +SL +      L +   N   + A+   +S  R  + +  +N            
Sbjct: 871 KHISFSNSLNLDGHSLGLIMESLNLTMMSAVFHNVSVRRLRVAVRSYN------------ 918

Query: 728 KYLHLIDCKMLQSLPVLPFCLESLD 752
            Y  +  C++  S+P L  CL + D
Sbjct: 919 -YNSVDACQLGTSIPRLFQCLTASD 942



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 126/532 (23%), Positives = 216/532 (40%), Gaps = 132/532 (24%)

Query: 450 LSALSFKGCQSLRSF----PSNLHFVCPVTIN-------FSYCVNLIEF--------PQ- 489
           LSA +F   ++LR      PSNL       +N       FS  +   E+        PQ 
Sbjct: 522 LSADTFTKMKALRILKFHAPSNLQRCTNTYLNLPKFLEPFSNKLRYFEWNGYPFESLPQH 581

Query: 490 -ISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG 548
             +  +  + +  S ++++    + L  LE +DL  CK+ +++  +F K  SL  + L G
Sbjct: 582 FYAKFLVEIRMPHSNVKQLWQGTKELGKLEGIDLSECKQFEKLP-NFSKASSLKWVNLSG 640

Query: 549 CLNL-EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIG 607
           C +L +  P +L   + L  +  DR          ++L  LE + V+ C  L+       
Sbjct: 641 CESLVDLHPSVL-CADTLVTLILDRCTKVRRVRGEKHLNFLEKISVDGCKSLEEF----- 694

Query: 608 SLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD 667
                        A+S        S+++ +LD S   G+++   + +  L  +  L++  
Sbjct: 695 -------------AVS--------SDLIENLDLSST-GIKTLDLS-IGRLQKLKQLNLES 731

Query: 668 YAVREIPQEIAYLSSLEILYLSGNNF----ESLPAIIKQMSQLRFIHLEDFNMLQSLPEL 723
             +  IP+E++ + S+  L +SG+      + L  +   +  L+ +H++DF     LP  
Sbjct: 732 LRLNRIPKELSSVRSIRELKISGSRLIVEKKQLHELFDGLQSLQILHMKDFINQFELP-- 789

Query: 724 PLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNM------LRSLPELPLCLQYLNLEDC 777
                 +H +  K+++           L+L G NM      ++ L EL +    L+L +C
Sbjct: 790 ----NNVH-VASKLME-----------LNLDGSNMKMLPQSIKKLEELEI----LSLVNC 829

Query: 778 NMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLK 837
             L  +PELP  + LL   NC  L S+      L++L   ++ K +KH            
Sbjct: 830 RKLECIPELPPLITLLNAVNCTSLVSVSN----LKKLATKMIGK-TKH------------ 872

Query: 838 SAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVL 897
                  F+N L L+G +   I+             SL L    A+   +S  R  + V 
Sbjct: 873 -----ISFSNSLNLDGHSLGLIM------------ESLNLTMMSAVFHNVSVRRLRVAVR 915

Query: 898 P-----------GSEIPDWFSN-QSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
                       G+ IP  F    +S SSI I L P  S  NL+GF +  VL
Sbjct: 916 SYNYNSVDACQLGTSIPRLFQCLTASDSSITITLLPDRS--NLLGFIYSVVL 965


>gi|145358924|ref|NP_199464.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008011|gb|AED95394.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1168

 Score =  240 bits (613), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 217/716 (30%), Positives = 323/716 (45%), Gaps = 134/716 (18%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSD--VRGNSETAGGLE------ 55
           ++ V++VGIWG  GIGKTT+A+A+F+Q S  F  S F+    V  + ET  G        
Sbjct: 201 AEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSRETYKGANPDDPNM 260

Query: 56  --HLQKQMLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
             HLQ   LS  L +K       I H     ER++  K LI++DD++++  L  L+G+ +
Sbjct: 261 KLHLQGCFLSEILGKK----DIKIDHLGALGERLKHQKTLIIIDDLDDLVVLDSLVGKTN 316

Query: 112 QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH 171
            FG GSRI+V T +K+ L     +   IY V+    E A E FC  AF EN  PE     
Sbjct: 317 WFGCGSRIIVITNNKQFLRAHGIDH--IYEVSLPSKERAQEMFCQSAFGENSPPEGFEEL 374

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL- 230
              +       PL L V GS+L  ++K +W K+L  L    +  I +    LK+S++ + 
Sbjct: 375 VVEIAWLAGSLPLGLTVFGSALRGRKKEYWVKMLPRLQNDLDGNIEET---LKVSYDAIG 431

Query: 231 TPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDIL 287
             + +++F  IAC F       +  +L DS  DV   L+ L+DKSL+ +  + + MH +L
Sbjct: 432 NVKDQALFRLIACLFNHVKVRDIELLLADSGLDVNIALENLVDKSLIHVRNDHVEMHRLL 491

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA 347
           QE GR IVR +S   PG+R  L D  +   VL    GT  + GI LD SK+    +   A
Sbjct: 492 QETGRNIVRSQSTDNPGEREFLVDSNDSRTVLSEGIGTRKVLGISLDTSKVSEFCVHENA 551

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F  M NL         F E E              KV LP  ++Y   + + L WD +PL
Sbjct: 552 FKGMGNLLFLDISSKTFIEEE-------------VKVHLPEKINYYSVQPKQLIWDRFPL 598

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEG------------------------EKAC---- 439
           + +P  F  +NLV+L +  SK+E+ WEG                         KA     
Sbjct: 599 KCMPYTF-LRNLVKLEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIPDLSKATNIEK 657

Query: 440 -----------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP 488
                      +PSSI+N   L  L+ + C  L + P+  +      +NF+ C  L  FP
Sbjct: 658 LDFGHCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWKLRTFP 717

Query: 489 QISGKVTRLYLGQSAIEEVP---------------------------------------- 508
           + +  ++ L L +++IEE P                                        
Sbjct: 718 EFATNISNLILAETSIEEYPSNLYFKNVRELSMGKADSDENKCQGVKPFMPMLSPTLTLL 777

Query: 509 ------------SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
                       SS + L +LE LD+  C+ L+ + T    L SLV+L L GC  L+ FP
Sbjct: 778 ELWNIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGI-NLESLVSLNLFGCSRLKRFP 836

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           +I   +++L     D+T I E+P   EN   L  L ++ C +L  +  NI  L++L
Sbjct: 837 DISTNIKYLDL---DQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHL 889


>gi|10177589|dbj|BAB10820.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1298

 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 217/716 (30%), Positives = 323/716 (45%), Gaps = 134/716 (18%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSD--VRGNSETAGGLE------ 55
           ++ V++VGIWG  GIGKTT+A+A+F+Q S  F  S F+    V  + ET  G        
Sbjct: 239 AEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSRETYKGANPDDPNM 298

Query: 56  --HLQKQMLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
             HLQ   LS  L +K       I H     ER++  K LI++DD++++  L  L+G+ +
Sbjct: 299 KLHLQGCFLSEILGKK----DIKIDHLGALGERLKHQKTLIIIDDLDDLVVLDSLVGKTN 354

Query: 112 QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH 171
            FG GSRI+V T +K+ L     +   IY V+    E A E FC  AF EN  PE     
Sbjct: 355 WFGCGSRIIVITNNKQFLRAHGIDH--IYEVSLPSKERAQEMFCQSAFGENSPPEGFEEL 412

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL- 230
              +       PL L V GS+L  ++K +W K+L  L    +  I +    LK+S++ + 
Sbjct: 413 VVEIAWLAGSLPLGLTVFGSALRGRKKEYWVKMLPRLQNDLDGNIEET---LKVSYDAIG 469

Query: 231 TPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDIL 287
             + +++F  IAC F       +  +L DS  DV   L+ L+DKSL+ +  + + MH +L
Sbjct: 470 NVKDQALFRLIACLFNHVKVRDIELLLADSGLDVNIALENLVDKSLIHVRNDHVEMHRLL 529

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA 347
           QE GR IVR +S   PG+R  L D  +   VL    GT  + GI LD SK+    +   A
Sbjct: 530 QETGRNIVRSQSTDNPGEREFLVDSNDSRTVLSEGIGTRKVLGISLDTSKVSEFCVHENA 589

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F  M NL         F E E              KV LP  ++Y   + + L WD +PL
Sbjct: 590 FKGMGNLLFLDISSKTFIEEE-------------VKVHLPEKINYYSVQPKQLIWDRFPL 636

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEG------------------------EKAC---- 439
           + +P  F  +NLV+L +  SK+E+ WEG                         KA     
Sbjct: 637 KCMPYTF-LRNLVKLEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIPDLSKATNIEK 695

Query: 440 -----------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP 488
                      +PSSI+N   L  L+ + C  L + P+  +      +NF+ C  L  FP
Sbjct: 696 LDFGHCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWKLRTFP 755

Query: 489 QISGKVTRLYLGQSAIEEVP---------------------------------------- 508
           + +  ++ L L +++IEE P                                        
Sbjct: 756 EFATNISNLILAETSIEEYPSNLYFKNVRELSMGKADSDENKCQGVKPFMPMLSPTLTLL 815

Query: 509 ------------SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
                       SS + L +LE LD+  C+ L+ + T    L SLV+L L GC  L+ FP
Sbjct: 816 ELWNIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGI-NLESLVSLNLFGCSRLKRFP 874

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           +I   +++L     D+T I E+P   EN   L  L ++ C +L  +  NI  L++L
Sbjct: 875 DISTNIKYLDL---DQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHL 927


>gi|110741877|dbj|BAE98880.1| disease resistance like protein [Arabidopsis thaliana]
          Length = 1168

 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 217/716 (30%), Positives = 323/716 (45%), Gaps = 134/716 (18%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSD--VRGNSETAGGLE------ 55
           ++ V++VGIWG  GIGKTT+A+A+F+Q S  F  S F+    V  + ET  G        
Sbjct: 201 AEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSRETYKGANPDDPNM 260

Query: 56  --HLQKQMLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
             HLQ   LS  L +K       I H     ER++  K LI++DD++++  L  L+G+ +
Sbjct: 261 KLHLQGCFLSEILGKK----DIKIDHLGALGERLKHQKTLIIIDDLDDLVVLDSLVGKTN 316

Query: 112 QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH 171
            FG GSRI+V T +K+ L     +   IY V+    E A E FC  AF EN  PE     
Sbjct: 317 WFGCGSRIIVITNNKQFLRAHGIDH--IYEVSLPSKERAQEMFCQSAFGENSPPEGFEEL 374

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL- 230
              +       PL L V GS+L  ++K +W K+L  L    +  I +    LK+S++ + 
Sbjct: 375 VVEIAWLAGSLPLGLTVFGSALRGRKKEYWVKMLPRLQNDLDGNIEET---LKVSYDAIG 431

Query: 231 TPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDIL 287
             + +++F  IAC F       +  +L DS  DV   L+ L+DKSL+ +  + + MH +L
Sbjct: 432 NVKDQALFRLIACLFNHVKVRDIELLLADSGLDVNIALENLVDKSLIHVRNDHVEMHRLL 491

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA 347
           QE GR IVR +S   PG+R  L D  +   VL    GT  + GI LD SK+    +   A
Sbjct: 492 QETGRNIVRSQSTDNPGERVFLVDSNDSRTVLSEGIGTRKVLGISLDTSKVSEFCVHENA 551

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F  M NL         F E E              KV LP  ++Y   + + L WD +PL
Sbjct: 552 FKGMGNLLFLDISSKTFIEEE-------------VKVHLPEKINYYSVQPKQLIWDRFPL 598

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEG------------------------EKAC---- 439
           + +P  F  +NLV+L +  SK+E+ WEG                         KA     
Sbjct: 599 KCMPYTF-LRNLVKLEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIPDLSKATNIEK 657

Query: 440 -----------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP 488
                      +PSSI+N   L  L+ + C  L + P+  +      +NF+ C  L  FP
Sbjct: 658 LDFGHCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWKLRTFP 717

Query: 489 QISGKVTRLYLGQSAIEEVP---------------------------------------- 508
           + +  ++ L L +++IEE P                                        
Sbjct: 718 EFATNISNLILAETSIEEYPSNLYFKNVRELSMGKADSDENKCQGVKPFMPMLSPTLTLL 777

Query: 509 ------------SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
                       SS + L +LE LD+  C+ L+ + T    L SLV+L L GC  L+ FP
Sbjct: 778 ELWNIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGI-NLESLVSLNLFGCSRLKRFP 836

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           +I   +++L     D+T I E+P   EN   L  L ++ C +L  +  NI  L++L
Sbjct: 837 DISTNIKYLDL---DQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHL 889


>gi|15237452|ref|NP_199463.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177588|dbj|BAB10819.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008010|gb|AED95393.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1353

 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 217/716 (30%), Positives = 323/716 (45%), Gaps = 134/716 (18%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSD--VRGNSETAGGLE------ 55
           ++ V++VGIWG  GIGKTT+A+A+F+Q S  F  S F+    V  + ET  G        
Sbjct: 200 AEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSRETYKGANPDDPNM 259

Query: 56  --HLQKQMLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELD 111
             HLQ   LS  L +K       I H     ER++  K LI++DD++++  L  L+G+ +
Sbjct: 260 KLHLQGCFLSEILGKK----DIKIDHLGALGERLKHQKTLIIIDDLDDLVVLDSLVGKTN 315

Query: 112 QFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH 171
            FG GSRI+V T +K+ L     +   IY V+    E A E FC  AF EN  PE     
Sbjct: 316 WFGCGSRIIVITNNKQFLRAHGIDH--IYEVSLPSKERAQEMFCQSAFGENSPPEGFEEL 373

Query: 172 SRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL- 230
              +       PL L V GS+L  ++K +W K+L  L    +  I +    LK+S++ + 
Sbjct: 374 VVEIAWLAGSLPLGLTVFGSALRGRKKEYWVKMLPRLQNDLDGNIEET---LKVSYDAIG 430

Query: 231 TPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDIL 287
             + +++F  IAC F       +  +L DS  DV   L+ L+DKSL+ +  + + MH +L
Sbjct: 431 NVKDQALFRLIACLFNHVKVRDIELLLADSGLDVNIALENLVDKSLIHVRNDHVEMHRLL 490

Query: 288 QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA 347
           QE GR IVR +S   PG+R  L D  +   VL    GT  + GI LD SK+    +   A
Sbjct: 491 QETGRNIVRSQSTDNPGEREFLVDSNDSRTVLSEGIGTRKVLGISLDTSKVSEFCVHENA 550

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F  M NL         F E E              KV LP  ++Y   + + L WD +PL
Sbjct: 551 FKGMGNLLFLDISSKTFIEEE-------------VKVHLPEKINYYSVQPKQLIWDRFPL 597

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEG------------------------EKAC---- 439
           + +P  F  +NLV+L +  SK+E+ WEG                         KA     
Sbjct: 598 KCMPYTFL-RNLVKLEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIPDLSKATNIEK 656

Query: 440 -----------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFP 488
                      +PSSI+N   L  L+ + C  L + P+  +      +NF+ C  L  FP
Sbjct: 657 LDFGHCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWKLRTFP 716

Query: 489 QISGKVTRLYLGQSAIEEVP---------------------------------------- 508
           + +  ++ L L +++IEE P                                        
Sbjct: 717 EFATNISNLILAETSIEEYPSNLYFKNVRELSMGKADSDENKCQGVKPFMPMLSPTLTLL 776

Query: 509 ------------SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
                       SS + L +LE LD+  C+ L+ + T    L SLV+L L GC  L+ FP
Sbjct: 777 ELWNIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGI-NLESLVSLNLFGCSRLKRFP 835

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL 612
           +I   +++L     D+T I E+P   EN   L  L ++ C +L  +  NI  L++L
Sbjct: 836 DISTNIKYLDL---DQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHL 888


>gi|357500597|ref|XP_003620587.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|357500703|ref|XP_003620640.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495602|gb|AES76805.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495655|gb|AES76858.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1094

 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 215/664 (32%), Positives = 330/664 (49%), Gaps = 60/664 (9%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS D V  +GI GMGGIGKTTLA A++DQ SH F  SC++ DV        G  + QKQ
Sbjct: 211 LDSVDCVCAIGISGMGGIGKTTLAMALYDQISHRFSASCYIDDVTKIYSLHDGPLNAQKQ 270

Query: 61  MLSTTLSEKLEVAGP--NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +L  TL  +  +     N     + R+RR K+L++LD+VNEV QL+++    +  G GSR
Sbjct: 271 ILFQTLGIEHHLISNRYNATDLIRRRLRREKVLLILDNVNEVEQLEKIAVHREWLGAGSR 330

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFK-ENHCPEDLNWHSRSVVS 177
           IVV +RD+ +L+++  +    Y+V  L   E+ + FC  AFK EN    +    +  ++S
Sbjct: 331 IVVISRDEHILKEYGVD--VFYKVPLLNMAESHKLFCRKAFKLENIILGNYQNLADEILS 388

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y  G PL + +LGS L  +  + W      L R+ ES   D+ ++L +SF+ L    + I
Sbjct: 389 YANGLPLAITILGSFLFGRNVTEWKSA---LARLRESPNKDVMNVLHLSFDGLEETEQEI 445

Query: 238 FLDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FLDIACFF     + V +IL+     +D+ L +L DKSL++ + + + +H +L+E+GR+I
Sbjct: 446 FLDIACFFNSWPMEEVKNILNCCGFHADIGLRVLNDKSLINTNYSHIEIHSLLEELGRKI 505

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V++ S KE  K SR+W  K++  V+  N     +E I L+    + I+++    + M+NL
Sbjct: 506 VQENSSKEQRKWSRVWSKKQLYNVMVENM-QKHVEAIVLN----EEIDMNAEHVSKMNNL 560

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           R   F         K     +    S+S             KL+Y+ W  YP + LPSNF
Sbjct: 561 RFLIF---------KYGGCISGSPWSFS------------NKLKYVDWHEYPFKYLPSNF 599

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLS---ALSFKGCQSLRSFPSNLHFV 471
            P  LVEL L+ SK+EQ W  +K      + N K+L    +L          FP NL   
Sbjct: 600 HPNELVELILKSSKIEQLWTNKKY-----LPNLKHLDLRHSLELVKILDFGEFP-NLE-- 651

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRL-YLGQ---SAIEEVPSSIECLTDLEVLDLRGCKR 527
               +N   C+NL+E     G + +L YL       +  +P++I  L+ LE L++ GC +
Sbjct: 652 ---KLNLEGCINLVELDPSIGLLRKLVYLNLYECKNLVSIPNNIFSLSSLEDLNMYGCSK 708

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
           + +      K   +             F  I+    HL+  +S  T  T L  S  +L  
Sbjct: 709 VFKNPMHLKKKHDISESASHSRSMSSVFKWIMLP-HHLR--FSAPTRHTYLLPSLHSLVC 765

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
           L  + +  C  L  +PD I  L  L  +    +    LPS   LS ++  L+  HC  LE
Sbjct: 766 LRDVDISFC-HLSQVPDAIECLYSLERLNLEGNNFVTLPSLRKLSKLVY-LNLQHCMLLE 823

Query: 648 SFPR 651
           S P+
Sbjct: 824 SLPQ 827



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 144/289 (49%), Gaps = 20/289 (6%)

Query: 442 SSIQNFKYLSALSFKGC--QSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL 499
           S + N ++L    + GC   S  SF + L +V      F Y  +         ++  L L
Sbjct: 555 SKMNNLRFL-IFKYGGCISGSPWSFSNKLKYVDWHEYPFKYLPSNFH----PNELVELIL 609

Query: 500 GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL-EHFPEI 558
             S IE++ ++ + L +L+ LDLR    L +I   F +  +L  L L GC+NL E  P I
Sbjct: 610 KSSKIEQLWTNKKYLPNLKHLDLRHSLELVKI-LDFGEFPNLEKLNLEGCINLVELDPSI 668

Query: 559 --LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
             L K+ +L  +Y  +  ++ +P++  +L  LE L +  CSK+   P ++     +    
Sbjct: 669 GLLRKLVYLN-LYECKNLVS-IPNNIFSLSSLEDLNMYGCSKVFKNPMHLKKKHDISESA 726

Query: 617 AAASAISQLPSSVALSNMLR-SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
           + + ++S +   + L + LR S  + H   L S      L    +   H+S     ++P 
Sbjct: 727 SHSRSMSSVFKWIMLPHHLRFSAPTRHTYLLPSLHSLVCLRDVDISFCHLS-----QVPD 781

Query: 676 EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
            I  L SLE L L GNNF +LP+ ++++S+L +++L+   +L+SLP+LP
Sbjct: 782 AIECLYSLERLNLEGNNFVTLPS-LRKLSKLVYLNLQHCMLLESLPQLP 829



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 91/210 (43%), Gaps = 37/210 (17%)

Query: 747 CLESLDLTGCNMLRSLPELPLCL---QYLNLEDCNMLRSLPELPLCLQL--LTVRNCNRL 801
           CL  +D++ C+ L  +P+   CL   + LNLE  N + +LP L    +L  L +++C  L
Sbjct: 765 CLRDVDISFCH-LSQVPDAIECLYSLERLNLEGNNFV-TLPSLRKLSKLVYLNLQHCMLL 822

Query: 802 QSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILA 861
           +SLP++         S    + +++      P  L      F F NC KL  +       
Sbjct: 823 ESLPQL--------PSPTNIIRENNKYFWIWPTGL------FIF-NCPKLGERE------ 861

Query: 862 DSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP 921
               R   M  + L    E       +      IV PG+EIP W +N+S G SI I   P
Sbjct: 862 ----RCSSMTFSWLTQFIEANSQSYPTSFDWIQIVTPGNEIPIWINNKSVGDSIQIDRSP 917

Query: 922 --HSSCRNLIGFAFCAVLDSKKVDSDCFRY 949
             H +   +IGF  CAV     +  DC+ +
Sbjct: 918 IMHDNNNYIIGFLCCAVFS---MAPDCWMF 944


>gi|357513733|ref|XP_003627155.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355521177|gb|AET01631.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1223

 Score =  239 bits (611), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 199/614 (32%), Positives = 293/614 (47%), Gaps = 71/614 (11%)

Query: 6   TVQIVGIWGMGGIGKTTLAKAIFDQ-FSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           T+  +GIWGM GIGKTT+AK +F + F+H ++  CF+  +  +SE  G + ++  Q+L  
Sbjct: 202 TIPRIGIWGMSGIGKTTIAKQMFSKNFAH-YDNVCFLEKISEDSEKFGPI-YVCNQLLRE 259

Query: 65  TLSEKLEVAGPNIPH-FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
            L  ++  +  +  H F   R+ R K+ IVLDDVN   QL  L   L   G  SR+++TT
Sbjct: 260 LLKREITASDVHGLHTFITRRLFRKKVFIVLDDVNNTTQLDDLCRVLGDLGPNSRLIITT 319

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           RD+  L    G+  +IY V   +  ++ + F   AFK++H  +     S   V    G P
Sbjct: 320 RDRHTL---GGKVDEIYEVKTWKLRDSLKLFSLRAFKQDHPLKGYERVSERAVECAGGVP 376

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L LEVLGS    +++  W   L+      E+   DI  +L+ S+N L+ R K +FLDIA 
Sbjct: 377 LALEVLGSHFHSRKQEFWESELNLYENKGEA-FPDIQKVLRTSYNGLSWRQKEMFLDIAF 435

Query: 244 FFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIVRQES 299
           FF+GE+KD V  ILD    + +  ++IL DK+L++IS N  + MHD+LQ+M   IVR+E 
Sbjct: 436 FFKGENKDIVTRILDAFGFNATSGIEILEDKTLITISNNDRIQMHDLLQKMAFDIVREEY 495

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
             + GKRSRL D K+I  VL +NKG+DAIEGI  DLS+   I++   AF  M  LR  KF
Sbjct: 496 -NDRGKRSRLRDAKDICDVLGNNKGSDAIEGIIFDLSQKVDIHVQADAFKLMHKLRFLKF 554

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
           ++PK                               KKL   H               + L
Sbjct: 555 HIPKG-----------------------------KKKLEPFH--------------AEQL 571

Query: 420 VELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFS 479
           +++ L  S +E  W G        +Q    L A+    C+ LR  P     +    +  S
Sbjct: 572 IQICLPHSNIEHLWYG--------MQELVNLEAIDLSECKQLRHLPDLSGALKLKQLRLS 623

Query: 480 YCVNLIEF-PQISGKVT--RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFC 536
            C  L E  P    K T   L L +    E     + LT L+   ++GCK LK  S S  
Sbjct: 624 GCEELCELRPSAFSKDTLHTLLLDRCIKLESLMGEKHLTSLKYFSVKGCKNLKEFSLSSD 683

Query: 537 KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
            ++ L     L    +E     +  M +L+ +  +   +T LP    +L  L  L V  C
Sbjct: 684 SIKGLD----LSKTGIEILHPSIGDMNNLRLLNLEDLNLTNLPIELSHLRSLTELRVSTC 739

Query: 597 SKLDNLPDNIGSLE 610
           S    +    G+L+
Sbjct: 740 SSESQIVLGTGNLD 753



 Score = 43.1 bits (100), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 21/198 (10%)

Query: 537 KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
           KLR L   I  G   LE F       E L +I    + I  L    + L  LE + + +C
Sbjct: 548 KLRFLKFHIPKGKKKLEPF-----HAEQLIQICLPHSNIEHLWYGMQELVNLEAIDLSEC 602

Query: 597 SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR----T 652
            +L +LPD  G+L+     L+    + +L  S    + L +L    C  LES       T
Sbjct: 603 KQLRHLPDLSGALKLKQLRLSGCEELCELRPSAFSKDTLHTLLLDRCIKLESLMGEKHLT 662

Query: 653 FLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE 712
            L   S  G  ++ ++++           S++ L LS    E L   I  M+ LR ++LE
Sbjct: 663 SLKYFSVKGCKNLKEFSLSS--------DSIKGLDLSKTGIEILHPSIGDMNNLRLLNLE 714

Query: 713 DFNMLQSLPELPLCLKYL 730
           D N    L  LP+ L +L
Sbjct: 715 DLN----LTNLPIELSHL 728


>gi|358347701|ref|XP_003637894.1| Elongation factor Ts [Medicago truncatula]
 gi|355503829|gb|AES85032.1| Elongation factor Ts [Medicago truncatula]
          Length = 1319

 Score =  239 bits (610), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 212/682 (31%), Positives = 338/682 (49%), Gaps = 86/682 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V+++GIWGMGGIGKTTLA  ++ Q  H F+ SCF+ DV        G    QKQ
Sbjct: 211 LNSVDGVRVIGIWGMGGIGKTTLAMNLYGQICHRFDASCFIDDVSKIFRLHDGPIDAQKQ 270

Query: 61  MLSTTLS-EKLEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +L  TL  E  ++    +     + R+ R K L++LD+V++V QL+R+    +  G GSR
Sbjct: 271 ILHQTLGIEHHQICNHYSATDLIRHRLSREKTLLILDNVDQVEQLERIGVHREWLGAGSR 330

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFK-ENHCPEDLNWHSRSVVS 177
           IV+ +RD+ +L++++ +   +Y+V  L++ E+ + FC  AFK E    ++    +  +++
Sbjct: 331 IVIISRDEHILKEYKVD--VVYKVPLLDWTESHKLFCQKAFKLEKIIMKNYQNLAYEILN 388

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y  G PL + VLGS L  +  + W   L    R+ +S   D+ D+L++S++ L    K I
Sbjct: 389 YANGLPLAITVLGSFLSGRNVTEWKSALA---RLRQSPNKDVMDVLQLSYDGLEETEKEI 445

Query: 238 FLDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FLDIACFF   ++  + +IL+     +D+   +LIDKSL++I G+ + MH +L+E+GR+I
Sbjct: 446 FLDIACFFNSRNEKIIKNILNCCGFHADIGFIVLIDKSLITIHGSIVEMHSLLEELGRKI 505

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V++ S KE  K SR+W  +++  V   N        +F       GI+ +    + MSNL
Sbjct: 506 VQENSSKEQRKWSRMWSKQQLYNVTMENMEKHVEAVVFFG-----GIDKNVEFLSTMSNL 560

Query: 355 RLF-----KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
           RL      ++Y+   YE+  L   S                  L  KLRY+ W  YP + 
Sbjct: 561 RLLIIRHDEYYMINNYELVMLKPYS------------------LSNKLRYVQWTGYPFKY 602

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS--N 467
           LPS+F P  LVEL L  S ++Q W+ +K      + N + L     K  + +  F    N
Sbjct: 603 LPSSFHPAELVELILVRSCIKQLWKNKK-----HLPNLRRLDLSDSKKLEKIEDFGQFPN 657

Query: 468 LHFVCPVTINFSYCVNLIEFPQISGKVTRL-YLGQSA---IEEVPSSIECLTDLEVLDLR 523
           L +     +N   C+ L+E     G + +L YL       +  +P++I  L+ L+ L++ 
Sbjct: 658 LEW-----LNLERCIKLVELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMS 712

Query: 524 GCKRLK--------------RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY 569
           GC +L               R STS C+  S V  + +       FP        +   Y
Sbjct: 713 GCSKLMKPGISSEKKNKHDIRESTSHCRSTSSVFKLFI-------FPNNASFSAPVTHTY 765

Query: 570 SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSV 629
                  +LP  F  L  L  + +  C  L ++PD I  L  L  +    +    LPS  
Sbjct: 766 -------KLP-CFRILYCLRNIDISFC-HLSHVPDAIECLHRLERLNLGGNNFVTLPSMR 816

Query: 630 ALSNMLRSLDSSHCKGLESFPR 651
            LS ++  L+  HCK LES P+
Sbjct: 817 KLSRLVY-LNLEHCKLLESLPQ 837



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 185/472 (39%), Gaps = 103/472 (21%)

Query: 572  RTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAASAISQLPSSV 629
            R+ I +L  + ++LP L  L + D  KL+ + D     +LE+L   L     + +L  S+
Sbjct: 619  RSCIKQLWKNKKHLPNLRRLDLSDSKKLEKIEDFGQFPNLEWLN--LERCIKLVELDPSI 676

Query: 630  ALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHIS----------------DYAVREI 673
             L   L  L+   C  L S P   + GLS++  L++S                 + +RE 
Sbjct: 677  GLLRKLVYLNLERCYNLVSIPNN-IFGLSSLKYLNMSGCSKLMKPGISSEKKNKHDIRES 735

Query: 674  PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLI 733
                   SS+  L++  NN  S  A +    +L                   C + L   
Sbjct: 736  TSHCRSTSSVFKLFIFPNN-ASFSAPVTHTYKLP------------------CFRIL--- 773

Query: 734  DCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCL---QYLNLEDCNMLRSLPELPLCL 790
                        +CL ++D++ C+ L  +P+   CL   + LNL   N + +LP +    
Sbjct: 774  ------------YCLRNIDISFCH-LSHVPDAIECLHRLERLNLGGNNFV-TLPSMRKLS 819

Query: 791  QL--LTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNC 848
            +L  L + +C  L+SLP++               S   PD     E   +  +     NC
Sbjct: 820  RLVYLNLEHCKLLESLPQLPF------------PSTIGPDYHENNEYYWTKGLVI--FNC 865

Query: 849  LKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSN 908
             KL  +     +  S ++             + +    L EL+   IV PGSEIP W +N
Sbjct: 866  PKLGERECCSSITFSWMK-------QFIQANQQSYGPYLYELQ---IVTPGSEIPSWINN 915

Query: 909  QSSGSSICIQLPP--HSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSET 966
            QS G SI I   P  H +  N+IGF FCAV             F ++ Q    I+ L  +
Sbjct: 916  QSMGGSILIDESPVIHDNKNNIIGFVFCAV-------------FCMAPQDQTMIECLPLS 962

Query: 967  KHVDLG--YNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAER 1016
             ++ +G   N R    +ID D +         V FP  Y+    T + +  R
Sbjct: 963  VYMKMGDERNCRKFPVIIDRDLIPTKSSHLWLVYFPREYYDVFGTIRIYCTR 1014


>gi|298953303|gb|ADI99936.1| TIR-CC-NBS-AAA+ATPase class resistance protein [Cucumis sativus]
          Length = 991

 Score =  239 bits (610), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 196/641 (30%), Positives = 315/641 (49%), Gaps = 72/641 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ + +VG++G+GG+GKTTLAKA++++ S +FEG CF+++VR  S    GL  LQK ++ 
Sbjct: 209 SNEITMVGLYGIGGMGKTTLAKALYNKISDDFEGCCFLANVREASNQYRGLVELQKTLIR 268

Query: 64  TTL---SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             L   S K+   G  I    ++R+   K++++LDD++   QL+ L G  D FG GS+++
Sbjct: 269 EILMDDSIKVSNVGIGIS-IIRDRLCSKKIILILDDIDTHEQLQALAGGHDWFGHGSKVI 327

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            TTR+K++L        K  RVNGL   E  E F   AFK +H   D    S+  V Y K
Sbjct: 328 ATTRNKQLLASHGFNILK--RVNGLNAIEGLELFSWHAFKNSHPSSDYLDVSKRAVHYCK 385

Query: 181 GNPLVLEVLGSSL-CLKRKSHWGKVLHDLNRICESEIHD--IYDILKISFNKLTPRVKSI 237
           G PL LEVLGS L  +  +S + ++L +     E+   D  I DIL+IS+++L   VK I
Sbjct: 386 GLPLALEVLGSFLNSIDDQSKFERILDEY----ENSYLDKGIQDILRISYDELEQDVKEI 441

Query: 238 FLDIACFFEGEDKDFVASILDDSESDV-----LDILIDKSLVSISG-NFLNMHDILQEMG 291
           FL I+C F  EDK+ V  +L + +S       +  L D SL++I   N + MHD++Q+MG
Sbjct: 442 FLYISCCFVHEDKNEVQMMLKECDSRFRLEMGIKKLTDLSLLTIDKFNRVEMHDLIQQMG 501

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
             I   E+     KR RL   K++  VL  +    A++ I L+  +   +++D R F  +
Sbjct: 502 HTIHLLETSNSH-KRKRLLFEKDVMDVLNGDMEARAVKVIKLNFHQPTELDIDSRGFEKV 560

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NL + K +                       V     L+YLP  LR++ W  +P  +LP
Sbjct: 561 KNLVVLKVH----------------------NVTSSKSLEYLPSSLRWMIWPKFPFSSLP 598

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
           S +  + L EL++  S ++    G   C        K+L  ++    + L         +
Sbjct: 599 STYSLEKLTELSMPSSFIKHFGNGYLNC--------KWLKRINLNYSKFLEEISDLSSAI 650

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
               +N S C  L+   +  G      LG+ A  E+ S     T                
Sbjct: 651 NLEELNLSECKKLVRVHESVGS-----LGKLAKLELSSHPNGFTQF-------------- 691

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKME-HLKRIYSDRTPITELPSSFENLPGLEV 590
             S  KL+SL  L++  C  +E +P   E+M+  LK +      +T+L  +  NL GL+ 
Sbjct: 692 -PSNLKLKSLQKLVMYECRIVESYPHFSEEMKSSLKELRIQSCSVTKLSPTIGNLTGLQH 750

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYILAAA-SAISQLPSSVA 630
           L+++ C +L  LP  +   E + Y+ A    ++++ P ++A
Sbjct: 751 LWIDVCKELTTLPKILKVPEGVIYMNAQGCRSLARFPDNIA 791



 Score = 43.1 bits (100), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 4/174 (2%)

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
           ++HF       + LKRI  + +   E  S   +   LE L + +C KL  + +++GSL  
Sbjct: 616 IKHFGNGYLNCKWLKRINLNYSKFLEEISDLSSAINLEELNLSECKKLVRVHESVGSLGK 675

Query: 612 LYYILAAA--SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA 669
           L  +  ++  +  +Q PS++ L + L+ L    C+ +ES+P       S++  L I   +
Sbjct: 676 LAKLELSSHPNGFTQFPSNLKLKS-LQKLVMYECRIVESYPHFSEEMKSSLKELRIQSCS 734

Query: 670 VREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE 722
           V ++   I  L+ L+ L++       +LP I+K    + +++ +    L   P+
Sbjct: 735 VTKLSPTIGNLTGLQHLWIDVCKELTTLPKILKVPEGVIYMNAQGCRSLARFPD 788


>gi|298205203|emb|CBI17262.3| unnamed protein product [Vitis vinifera]
          Length = 681

 Score =  239 bits (610), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 182/481 (37%), Positives = 250/481 (51%), Gaps = 37/481 (7%)

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           ++Y V  L FE+A E F  FAF++N   +D    S  VV Y  G PL L+VLGS L  K 
Sbjct: 3   EVYEVEELNFEQARELFSLFAFRQNLPKQDFIHLSDRVVYYCHGLPLALKVLGSLLFNKT 62

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
              W   L  L R  E E+  I  +LK+SF+ L    K IFLDIAC F+GEDKDFV+ IL
Sbjct: 63  ILQWESELCKLER--EPEV-KIQIVLKLSFDGLDYTQKKIFLDIACCFKGEDKDFVSRIL 119

Query: 258 DD----SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           D     +ES +   L DK L+S S N + MHD++QEMGR I+R ES  +P K SRLWDP 
Sbjct: 120 DGCNLYAESGI-KALYDKCLISFSKNKILMHDLIQEMGRNIIRSESPYDPTKWSRLWDPS 178

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSM 373
           ++ R     KG   +E IFLDLS+   + +  + F  M  LRL K Y+  +         
Sbjct: 179 DVCRAFTMGKGMKNVEAIFLDLSRSTPLQVSTKIFAKMKQLRLLKIYLGGY-------CG 231

Query: 374 STEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPW 433
           + E+QL   K+ LP    +   +LRYLHW+ YPL++LPS F   NL+ELN++ S ++Q  
Sbjct: 232 TREKQL---KIILPEDFQFPAPELRYLHWEGYPLKSLPSYFLGVNLIELNMKDSNIKQLR 288

Query: 434 EGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
           +          +N  YL          +  F + +H +   +  F + V    FP+I+  
Sbjct: 289 Q----------RNEVYLVFHDHIILFEINFFFTKIHLLNQNS--FCHSVWSNTFPEITED 336

Query: 494 VTRLY---LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
           +  L    L  + I+E+PSSI+ L  L  LD+  C  L     S   LRSL  L L GC 
Sbjct: 337 MKYLGILDLSGTGIKELPSSIQNLKSLWRLDMSNC--LVTPPDSIYNLRSLTYLRLRGCC 394

Query: 551 -NLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGS 608
            NLE FP+  E    L+R+  S    +  +PS    L  L  L +  C  L ++P+   S
Sbjct: 395 SNLEKFPKNPEGFCTLERLDLSHCNLMVSIPSGISQLCKLRYLDISHCKMLQDIPELPSS 454

Query: 609 L 609
           L
Sbjct: 455 L 455



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 15/139 (10%)

Query: 672 EIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLK--- 728
           EI +++ YL    IL LSG   + LP+ I+ +  L    L+  N L + P+    L+   
Sbjct: 332 EITEDMKYLG---ILDLSGTGIKELPSSIQNLKSL--WRLDMSNCLVTPPDSIYNLRSLT 386

Query: 729 YLHLIDC-KMLQSLPVLP--FC-LESLDLTGCNMLRSLPE--LPLC-LQYLNLEDCNMLR 781
           YL L  C   L+  P  P  FC LE LDL+ CN++ S+P     LC L+YL++  C ML+
Sbjct: 387 YLRLRGCCSNLEKFPKNPEGFCTLERLDLSHCNLMVSIPSGISQLCKLRYLDISHCKMLQ 446

Query: 782 SLPELPLCLQLLTVRNCNR 800
            +PELP  L+ +    C +
Sbjct: 447 DIPELPSSLREIDAHYCTK 465



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 72/174 (41%), Gaps = 47/174 (27%)

Query: 555 FPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYY 614
           FPEI E M++L  +    T I ELPSS +NL  L  L + +C  L   PD+I +L  L Y
Sbjct: 330 FPEITEDMKYLGILDLSGTGIKELPSSIQNLKSLWRLDMSNC--LVTPPDSIYNLRSLTY 387

Query: 615 ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIP 674
           +                           C  LE FP+                      P
Sbjct: 388 LRLRGC----------------------CSNLEKFPKN---------------------P 404

Query: 675 QEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLK 728
           +    L  L++ +   N   S+P+ I Q+ +LR++ +    MLQ +PELP  L+
Sbjct: 405 EGFCTLERLDLSHC--NLMVSIPSGISQLCKLRYLDISHCKMLQDIPELPSSLR 456


>gi|22329895|ref|NP_174439.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|20466614|gb|AAM20624.1| disease resistance gene, putative [Arabidopsis thaliana]
 gi|34098813|gb|AAQ56789.1| At1g31540 [Arabidopsis thaliana]
 gi|332193248|gb|AEE31369.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 776

 Score =  239 bits (610), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 194/596 (32%), Positives = 289/596 (48%), Gaps = 67/596 (11%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV----------RGNSETAGG 53
           S  V++VGI G  GIGKTT+A+A+F + S  F+GS F+               N +    
Sbjct: 201 SKEVRMVGISGSSGIGKTTIARALFKRLSRHFQGSTFIDRAFVSYSRNIYSGANPDDPNM 260

Query: 54  LEHLQKQMLSTTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQ 112
              LQ   LS  L +K +++  P      +ER++  K+LI++DD++++  L  L+G+   
Sbjct: 261 KLQLQGHFLSEILGKKDIKIDDPAA---LEERLKHQKVLIIIDDLDDIMVLDTLVGQTQW 317

Query: 113 FGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS 172
           FG GSRI+V T DK  L     +   IY V+      A +  C  AFK+N+ P+      
Sbjct: 318 FGYGSRIIVVTNDKHFLIAHGIDH--IYEVSFPTDVHACQMLCQSAFKQNYAPKGFEDLV 375

Query: 173 RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
             VV +    PL L +LG  L  +   +W  +L  L      +   I  IL+IS++ L  
Sbjct: 376 VDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDMLPRLENSLRID-GKIEKILRISYDGLES 434

Query: 233 RVKSIFLDIACFFEGEDKDFVASILDDSE-SDVLDILIDKSLVSISGNFLNMHDILQEMG 291
             + IF  IAC F   +   + S+L DS+ S  L+ L DKSL+ +   ++ MH  LQEMG
Sbjct: 435 EDQEIFRHIACLFNHMEVTTIKSLLADSDVSFALENLADKSLIHVRQGYVVMHRSLQEMG 494

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IVR +S  +PG+R  L DP +I  +L    GT  + GI LD+  I+ +++  RAF  M
Sbjct: 495 RKIVRIQSIDKPGEREFLVDPNDIHDILNACTGTQKVLGISLDIRNIRELDVHERAFKGM 554

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
           SNLR        F EI+          L    + LP   DYLP+ L+ L W  +P+R +P
Sbjct: 555 SNLR--------FLEIKNFG-------LKEDGLHLPPSFDYLPRTLKLLCWSKFPMRCMP 599

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
             F+P+NLV+L ++ SK+ + WEG        +     L  +   G  +L+  P      
Sbjct: 600 FGFRPENLVKLEMQYSKLHKLWEG--------VAPLTCLKEMDLHGSSNLKVIPDLSEAT 651

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
               +N  +C +L+                    E+PSSI  L  L  LD+  CK LK +
Sbjct: 652 NLEILNLKFCESLV--------------------ELPSSIRNLNKLLNLDMLNCKSLKIL 691

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS--FENL 585
            T F  L+SL  L L  C  L+ FP+    +  L     + T I + PS+   ENL
Sbjct: 692 PTGF-NLKSLDRLNLYHCSKLKTFPKFSTNISVLNL---NLTNIEDFPSNLHLENL 743


>gi|215261579|gb|ACJ64859.1| disease resistance protein RPP1-like protein R5 [Arabidopsis
            thaliana]
          Length = 1202

 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 225/773 (29%), Positives = 354/773 (45%), Gaps = 131/773 (16%)

Query: 5    DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQ 58
            D V+++GIWG  GIGKTT+A+ +F+Q S  F+ S  + ++RG        E +  +E +Q
Sbjct: 344  DEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIIVNIRGIYPRLRLDEYSAQME-VQ 402

Query: 59   KQMLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            ++MLST  S+K ++  PN+    +ER++  K+ +VLD+V+ + QL  L  E   FG GSR
Sbjct: 403  QKMLSTIFSQK-DIIVPNLG-VAQERLKDKKVFLVLDEVDHIRQLDALAKETRWFGPGSR 460

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
            I++TT D RVL   R     +Y+V     +EAF+ FC  AF +    E     +  V++ 
Sbjct: 461  IIITTEDVRVLNAHRINH--VYKVKFPSSDEAFQIFCMNAFGQKQPHEGFCKLAWEVMAL 518

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
                PL L+VLGS+L    K  W + L  +    + EI     I+K SF+ L    K +F
Sbjct: 519  AGNLPLGLKVLGSALRGMSKPEWERTLPKIKYCLDGEIK---SIIKFSFDALCDEDKDLF 575

Query: 239  LDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS-GNFLNMHDILQEMGRQI 294
            L IACFF G     V  +L     DV   L +L++KSL+SI+    +  H +L++ GR+ 
Sbjct: 576  LYIACFFNGIKLHKVEGVLAKKFLDVRQSLHVLVEKSLISINQSGLIETHTVLKQFGRET 635

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
             R++      K   L D ++I  VL      D     + D ++ + +++  +A   M + 
Sbjct: 636  SRKQFVHGFAKPQFLVDARDICEVL-----NDDTIAFYRDYTE-EELSISEKALERMHDF 689

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            +  +  +  F   E+L S+    Q                 K+R LHW       LP  F
Sbjct: 690  QFVR--INAFAHPERLHSLLHHSQ-----------------KIRLLHWSYLKDICLPCTF 730

Query: 415  KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY--------------------LSALS 454
             P+ LVEL +  SK+ + WEG K      +QN ++                    L  L 
Sbjct: 731  NPEFLVELGMYASKLHKLWEGTK-----QLQNLRWMDLCYSRDLTKLPDLSTATNLEDLI 785

Query: 455  FKGCQSLRSFPSNLHFVCPVTI-NFSYCVNLIEFPQISGKVTRL----YLGQSAIEEVPS 509
             + C SL   P ++     + I + S C NL+E P I G  TRL        S++ ++PS
Sbjct: 786  LRNCSSLVRIPCSIENATNLQILDLSDCSNLVELPSI-GNATRLEELNLNNCSSLVKLPS 844

Query: 510  SIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY 569
            SI   T+L+ L LR C R+        +L ++     L  L+L +   +L          
Sbjct: 845  SINA-TNLQKLFLRNCSRV-------VELPAIENATNLQVLDLHNCSSLL---------- 886

Query: 570  SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSV 629
                   ELP S  +   L+ L +  CS+L   P+   ++E +  I    +AI ++P S+
Sbjct: 887  -------ELPPSIASATNLKKLDISGCSQLKCFPEISTNIEIVNLI---ETAIKEVPLSI 936

Query: 630  ALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA-VREIPQEIAYLSSLEILYL 688
               + L     S+ + L  FP    +         I+D   +RE  QEI           
Sbjct: 937  MSWSRLSYFGMSYFESLNEFPHALDI---------ITDLVLIREDIQEI----------- 976

Query: 689  SGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
                    P  +K MS+L  + L D   L SLP+L   L+Y+   +C+ L+ L
Sbjct: 977  --------PPWVKGMSRLGVLRLYDCKNLVSLPQLSDNLEYIVADNCQSLERL 1021



 Score = 40.4 bits (93), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 86/383 (22%), Positives = 151/383 (39%), Gaps = 101/383 (26%)

Query: 582  FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
             +NL  +++ +  D +KL +L     +LE L  IL   S++ ++P S+  +  L+ LD S
Sbjct: 755  LQNLRWMDLCYSRDLTKLPDL-STATNLEDL--ILRNCSSLVRIPCSIENATNLQILDLS 811

Query: 642  HCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAII 700
             C  L   P                          I   + LE L L+  ++   LP+ I
Sbjct: 812  DCSNLVELP-------------------------SIGNATRLEELNLNNCSSLVKLPSSI 846

Query: 701  KQMSQLRFIHLEDFNMLQSLP--ELPLCLKYLHLIDCKMLQSLP---VLPFCLESLDLTG 755
               + L+ + L + + +  LP  E    L+ L L +C  L  LP        L+ LD++G
Sbjct: 847  -NATNLQKLFLRNCSRVVELPAIENATNLQVLDLHNCSSLLELPPSIASATNLKKLDISG 905

Query: 756  CNMLRSLPELPLCLQYLNLEDCNM--------------------LRSLPELPLCLQLLT- 794
            C+ L+  PE+   ++ +NL +  +                      SL E P  L ++T 
Sbjct: 906  CSQLKCFPEISTNIEIVNLIETAIKEVPLSIMSWSRLSYFGMSYFESLNEFPHALDIITD 965

Query: 795  -VRNCNRLQSLPEILLCLQEL------DASVLEKLSKHSPDLQWAP----ESLKSAAICF 843
             V     +Q +P  +  +  L      D   L  L + S +L++      +SL+    CF
Sbjct: 966  LVLIREDIQEIPPWVKGMSRLGVLRLYDCKNLVSLPQLSDNLEYIVADNCQSLERLDCCF 1025

Query: 844  E-------FTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIV 896
                    F NC  LN +A + I+  S              GY                +
Sbjct: 1026 NNREIHLIFPNCFNLNQEARDLIMHTS------------TDGYA---------------I 1058

Query: 897  LPGSEIPDWFSNQSSGSSICIQL 919
              G+++P  F+++++  S+ I+L
Sbjct: 1059 FSGTQVPACFNHRATSDSLKIKL 1081


>gi|297791669|ref|XP_002863719.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309554|gb|EFH39978.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1222

 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 175/547 (31%), Positives = 276/547 (50%), Gaps = 71/547 (12%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDV-----RGNSETAGGLEHL 57
            SD V+++GIWG  GIGKTT+A+ ++++ S  F+ S F+  +     R  S+       L
Sbjct: 254 GSDEVRMIGIWGPSGIGKTTIARVVYNKLSSSFQLSVFMESIESKYTRPCSDDYCAKLQL 313

Query: 58  QKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           Q+Q +S   ++        I H    ++R++  K+L+VLD V++  QL  +  E   FG 
Sbjct: 314 QQQFMSQITNQN----DMKISHLGVVQDRLKDKKVLVVLDGVDKSMQLDAMAKETWWFGP 369

Query: 116 GSRIVVTTRDKRVLEKFRGEE-KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
           GSRI++TT+++++   FR      IY+VN    +EA +  C +AF +N         +R 
Sbjct: 370 GSRIIITTQNRKI---FREHGINHIYKVNFPSTDEALQILCTYAFGQNSPKHGFEELARE 426

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           V       PL L V+GS      K  W K L    R+  S   DI  ILK S++ L    
Sbjct: 427 VTQLAGELPLCLRVIGSYFRGMSKLEWTKALP---RLRSSLDADILSILKFSYDALDDED 483

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMG 291
           K +FL IACFF  E    V   L ++  DV   L+ L +KSL+S++  ++NMHD+L ++G
Sbjct: 484 KYLFLHIACFFNREWIVKVEEYLAETFLDVSHRLNGLAEKSLISLNRGYINMHDLLVKLG 543

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHN-KGTDAIEGIFLDLSKIK---GINLDPRA 347
           R IVR++S +EPG+R  L D +EI  VL  +  G+ ++ GI  +  + +    +++  RA
Sbjct: 544 RDIVRKQSIREPGQRLFLVDAREICDVLNLDANGSRSVMGINFNFGEYRIKEKLHISERA 603

Query: 348 FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPL 407
           F  MSNL+  +F                  + + + + LP+GL+Y+ +KLR LHW  +P+
Sbjct: 604 FQGMSNLQFLRF------------------EGNNNTIHLPHGLEYISRKLRLLHWTYFPM 645

Query: 408 RTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSN 467
             LP  F  + LVEL++R SK+E+ WEG        I+    L  +       L+  P  
Sbjct: 646 TCLPPIFNTEFLVELHMRYSKLEKLWEG--------IKPLPNLKRMDLSSSLLLKELP-- 695

Query: 468 LHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKR 527
                    + S   NL E     G         S++ ++PS+I C  +L  L+LR C  
Sbjct: 696 ---------DLSTATNLQELNLSGG---------SSLVKLPSAIGCTKNLRTLNLRYCSS 737

Query: 528 LKRISTS 534
           L  + +S
Sbjct: 738 LMNLPSS 744


>gi|357500581|ref|XP_003620579.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495594|gb|AES76797.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1594

 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 212/682 (31%), Positives = 338/682 (49%), Gaps = 86/682 (12%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S D V+++GIWGMGGIGKTTLA  ++ Q  H F+ SCF+ DV        G    QKQ
Sbjct: 211 LNSVDGVRVIGIWGMGGIGKTTLAMNLYGQICHRFDASCFIDDVSKIFRLHDGPIDAQKQ 270

Query: 61  MLSTTLS-EKLEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +L  TL  E  ++    +     + R+ R K L++LD+V++V QL+R+    +  G GSR
Sbjct: 271 ILHQTLGIEHHQICNHYSATDLIRHRLSREKTLLILDNVDQVEQLERIGVHREWLGAGSR 330

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFK-ENHCPEDLNWHSRSVVS 177
           IV+ +RD+ +L++++ +   +Y+V  L++ E+ + FC  AFK E    ++    +  +++
Sbjct: 331 IVIISRDEHILKEYKVD--VVYKVPLLDWTESHKLFCQKAFKLEKIIMKNYQNLAYEILN 388

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y  G PL + VLGS L  +  + W   L    R+ +S   D+ D+L++S++ L    K I
Sbjct: 389 YANGLPLAITVLGSFLSGRNVTEWKSALA---RLRQSPNKDVMDVLQLSYDGLEETEKEI 445

Query: 238 FLDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FLDIACFF   ++  + +IL+     +D+   +LIDKSL++I G+ + MH +L+E+GR+I
Sbjct: 446 FLDIACFFNSRNEKIIKNILNCCGFHADIGFIVLIDKSLITIHGSIVEMHSLLEELGRKI 505

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V++ S KE  K SR+W  +++  V   N        +F       GI+ +    + MSNL
Sbjct: 506 VQENSSKEQRKWSRMWSKQQLYNVTMENMEKHVEAVVFFG-----GIDKNVEFLSTMSNL 560

Query: 355 RLF-----KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
           RL      ++Y+   YE+  L   S                  L  KLRY+ W  YP + 
Sbjct: 561 RLLIIRHDEYYMINNYELVMLKPYS------------------LSNKLRYVQWTGYPFKY 602

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS--N 467
           LPS+F P  LVEL L  S ++Q W+ +K      + N + L     K  + +  F    N
Sbjct: 603 LPSSFHPAELVELILVRSCIKQLWKNKK-----HLPNLRRLDLSDSKKLEKIEDFGQFPN 657

Query: 468 LHFVCPVTINFSYCVNLIEFPQISGKVTRL-YLGQSA---IEEVPSSIECLTDLEVLDLR 523
           L +     +N   C+ L+E     G + +L YL       +  +P++I  L+ L+ L++ 
Sbjct: 658 LEW-----LNLERCIKLVELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMS 712

Query: 524 GCKRLK--------------RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY 569
           GC +L               R STS C+  S V  + +       FP        +   Y
Sbjct: 713 GCSKLMKPGISSEKKNKHDIRESTSHCRSTSSVFKLFI-------FPNNASFSAPVTHTY 765

Query: 570 SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSV 629
                  +LP  F  L  L  + +  C  L ++PD I  L  L  +    +    LPS  
Sbjct: 766 -------KLP-CFRILYCLRNIDISFC-HLSHVPDAIECLHRLERLNLGGNNFVTLPSMR 816

Query: 630 ALSNMLRSLDSSHCKGLESFPR 651
            LS ++  L+  HCK LES P+
Sbjct: 817 KLSRLVY-LNLEHCKLLESLPQ 837



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 194/492 (39%), Gaps = 105/492 (21%)

Query: 541  LVTLILL-GCL-----NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
            LV LIL+  C+     N +H P       +L+R+    +   E    F   P LE L +E
Sbjct: 612  LVELILVRSCIKQLWKNKKHLP-------NLRRLDLSDSKKLEKIEDFGQFPNLEWLNLE 664

Query: 595  DCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF 653
             C KL  L  +IG L  L Y+ L     +  +P+++   + L+ L+ S C  L       
Sbjct: 665  RCIKLVELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMSGCSKL------M 718

Query: 654  LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLED 713
              G+S+      + + +RE        SS+  L++  NN  S  A +    +L       
Sbjct: 719  KPGISSE---KKNKHDIRESTSHCRSTSSVFKLFIFPNN-ASFSAPVTHTYKLP------ 768

Query: 714  FNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCL---Q 770
                        C + L               +CL ++D++ C+ L  +P+   CL   +
Sbjct: 769  ------------CFRIL---------------YCLRNIDISFCH-LSHVPDAIECLHRLE 800

Query: 771  YLNLEDCNMLRSLPELPLCLQL--LTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPD 828
             LNL   N + +LP +    +L  L + +C  L+SLP++               S   PD
Sbjct: 801  RLNLGGNNFV-TLPSMRKLSRLVYLNLEHCKLLESLPQLPFP------------STIGPD 847

Query: 829  LQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLS 888
                 E   +  +     NC KL  +     +  S ++             + +    L 
Sbjct: 848  YHENNEYYWTKGLVI--FNCPKLGERECCSSITFSWMK-------QFIQANQQSYGPYLY 898

Query: 889  ELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP--HSSCRNLIGFAFCAVLDSKKVDSDC 946
            EL+   IV PGSEIP W +NQS G SI I   P  H +  N+IGF FCAV          
Sbjct: 899  ELQ---IVTPGSEIPSWINNQSMGGSILIDESPVIHDNKNNIIGFVFCAV---------- 945

Query: 947  FRYFYVSFQFDLEIKTLSETKHVDLG--YNSRYIEDLIDSDRVILGFKPCLNVGFPDGYH 1004
               F ++ Q    I+ L  + ++ +G   N R    +ID D +         V FP  Y+
Sbjct: 946  ---FCMAPQDQTMIECLPLSVYMKMGDERNCRKFPVIIDRDLIPTKSSHLWLVYFPREYY 1002

Query: 1005 HTIATFKFFAER 1016
                T + +  R
Sbjct: 1003 DVFGTIRIYCTR 1014


>gi|255563216|ref|XP_002522611.1| hypothetical protein RCOM_0884400 [Ricinus communis]
 gi|223538087|gb|EEF39698.1| hypothetical protein RCOM_0884400 [Ricinus communis]
          Length = 369

 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/366 (42%), Positives = 213/366 (58%), Gaps = 14/366 (3%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S  V+I+GIW MGGIGKTTLA+ IF + S +F  S F  +VR   E +  L+ LQ ++LS
Sbjct: 6   SKDVRILGIWEMGGIGKTTLARKIFKRISSQFHSSYFGQNVREKLEKST-LDSLQHEILS 64

Query: 64  TTLSEKLEVAGPNI---PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             L ++    G  I     F ++ + R K+LIVLDDVN+  Q+  L+   D +G GS I+
Sbjct: 65  ELLGKEYSDLGMPINISSSFIRKWIMRKKVLIVLDDVNDSEQIDFLVRPRDIYGPGSIII 124

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +T+RDK++L         IY V  L  ++A + F   AFK N   E L   +R  V Y +
Sbjct: 125 ITSRDKQILNYGNAN---IYEVKELNSDDALKLFILHAFKGNPPAEALMEVARMAVEYGR 181

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           GNPL L+VLGS+L  K        L  L  I + ++ +I   L+ISF+ L    K IFLD
Sbjct: 182 GNPLALKVLGSTLYDKSIEECRDHLRKLENISDKKLQNI---LRISFDDLDDDEKEIFLD 238

Query: 241 IACFFEGEDKDFVASILDD-SESDVLDI--LIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
           IACFF+ EDK+ V SIL     S ++ I  L DKSL+++S   + MHD+LQ+MGR IVRQ
Sbjct: 239 IACFFKWEDKNEVESILSSFGRSAIIGIRVLQDKSLITVSNKQIEMHDLLQQMGRDIVRQ 298

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTD-AIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
           E  K P  RSRLW P++I RVL  + G   +++ I LD+S  + + L   AF  M  L+ 
Sbjct: 299 ECIKNPEYRSRLWIPQDIYRVLTKDLGRSISVKSISLDMSDSRDMELSSTAFKRMRKLKF 358

Query: 357 FKFYVP 362
            +FY P
Sbjct: 359 LRFYSP 364


>gi|357499321|ref|XP_003619949.1| TIR-NBS-LRR disease resistance-like protein [Medicago truncatula]
 gi|355494964|gb|AES76167.1| TIR-NBS-LRR disease resistance-like protein [Medicago truncatula]
          Length = 1065

 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 209/697 (29%), Positives = 313/697 (44%), Gaps = 149/697 (21%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S D V +VG++G+GG+GK+TLA+AI++  + +FEG CF+ DVR NS     L+HLQ+++L
Sbjct: 240 SDDGVHMVGMYGIGGLGKSTLARAIYNFVADQFEGLCFLHDVRENS-AQNNLKHLQEKLL 298

Query: 63  --STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             +T L  KL+     I    KER+ R K+L++LDDV+ + QL  L G LD FG+GSR++
Sbjct: 299 FKTTGLEIKLDHVSEGIS-IIKERLCRKKILLILDDVDSIRQLDALAGGLDWFGRGSRVI 357

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTR+K +L       K  + V GL   +  E     AFK +  P          V+Y  
Sbjct: 358 ITTRNKHLLSTHG--IKSTHAVEGLYGTDGHELLRWMAFKSDKVPSGYEDILNRAVAYAS 415

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PLVLE++GS+L  K    W   L   +RI   EI  I   LK+S++ L    +S+FLD
Sbjct: 416 GLPLVLEIVGSNLFGKSIEEWKYTLDGYDRIPNKEIQKI---LKVSYDALEEEEQSVFLD 472

Query: 241 IACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
           IAC  +G    E +D + +      +  L +L+DK L+  S   + +HD++++MG+ IVR
Sbjct: 473 IACCSKGCGWREFEDMLRAHYGHCITHHLGVLVDKCLIYQSYGDMTLHDLIEDMGKAIVR 532

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLR 355
           QES KEPG+RSRLW   +I  VLK N GT  IE I+++   ++  I+   +AF  M+ L+
Sbjct: 533 QESPKEPGERSRLWCQDDIFHVLKENSGTSKIEMIYMNFPSMESVIDQKGKAFRKMTKLK 592

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
                  +F                        GL YLP  LR                 
Sbjct: 593 TLIIEDGRF----------------------SKGLKYLPSSLR----------------- 613

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
                                          F+ +  L+   C+ L   P          
Sbjct: 614 ------------------------------KFQNMKVLTLDECEHLTHIPDISGLSNLQK 643

Query: 476 INFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSF 535
           + F++C NLI                     +  SI  L  LE++    CK+L+     +
Sbjct: 644 LTFNFCKNLI--------------------TIDDSIGHLNKLELVSASCCKKLENFPPLW 683

Query: 536 CKLRSLVTLILLGCLN-LEHFPEILEKMEHLKRIYSDRTP--ITELPSSFENLPGLEVLF 592
                 + L L  C++ +  FP      +H  ++YS+ T   + E   S E LP +   F
Sbjct: 684 LVSLKNLELSLHPCVSGMLRFP------KHNDKMYSNVTELCLRECNLSDEYLPIILKWF 737

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
           V +   LD L +N+G              I  LP  +   ++LR L+   C+ LE     
Sbjct: 738 V-NVKHLD-LSENVG--------------IKILPECLNECHLLRILNLDGCESLEE---- 777

Query: 653 FLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS 689
                            +R IP  + YLS+ E L LS
Sbjct: 778 -----------------IRGIPPNLNYLSATECLSLS 797



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 96/229 (41%), Gaps = 22/229 (9%)

Query: 578 LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
           LPSS      ++VL +++C  L ++PD  G              +  +  S+   N L  
Sbjct: 608 LPSSLRKFQNMKVLTLDECEHLTHIPDISGLSNLQKLTFNFCKNLITIDDSIGHLNKLEL 667

Query: 638 LDSSHCKGLESFPRTFLLGLSAMGL-LHISDYAVREIPQEIAYL-SSLEILYLSGNNF-- 693
           + +S CK LE+FP  +L+ L  + L LH     +   P+    + S++  L L   N   
Sbjct: 668 VSASCCKKLENFPPLWLVSLKNLELSLHPCVSGMLRFPKHNDKMYSNVTELCLRECNLSD 727

Query: 694 ESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDL 753
           E LP I+K    ++ + L +   ++ LPE   CL   HL               L  L+L
Sbjct: 728 EYLPIILKWFVNVKHLDLSENVGIKILPE---CLNECHL---------------LRILNL 769

Query: 754 TGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQ 802
            GC  L  +  +P  L YL+  +C  L S     L  Q +    C  ++
Sbjct: 770 DGCESLEEIRGIPPNLNYLSATECLSLSSSTRRMLLSQKVHEAGCTNIR 818


>gi|255568980|ref|XP_002525460.1| hypothetical protein RCOM_1122080 [Ricinus communis]
 gi|223535273|gb|EEF36950.1| hypothetical protein RCOM_1122080 [Ricinus communis]
          Length = 642

 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 149/368 (40%), Positives = 215/368 (58%), Gaps = 42/368 (11%)

Query: 85  VRRMKLLIVLDDVNEV--------GQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           V+ +K L+ L+  ++V        G+++ L+G    +  GSR+V+T+R+K++L   R  +
Sbjct: 122 VKAVKSLLCLESTDDVRFVGIRGMGEIEFLVGNRASYCSGSRVVITSRNKQLL---RNMD 178

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
            KIY V  L + EA   F + AFK NH  ++    SR  V+Y  G PL L+V GS+L  K
Sbjct: 179 AKIYEVKKLNYLEALHLFSSHAFKGNHLKKEYMGLSRMAVTYAGGIPLALKVFGSNLYGK 238

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
               W   L  L    + +I  +   L+ISF+ L  + K +FLDIACFF+G DKD V  I
Sbjct: 239 SIEEWEGELEKLKATSDQKIQRM---LRISFDGLDKKEKEVFLDIACFFKGGDKDAVTKI 295

Query: 257 LDDS---ESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           LD         +  L DKSL++IS  N L MHD+LQ+MG+ IV +E  KE G+RSRLWDP
Sbjct: 296 LDSCGFFAKCGVSHLSDKSLITISSSNTLEMHDLLQQMGKDIVCEE--KELGQRSRLWDP 353

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
           K+I      +KGT   E I LD+SKI  + L   AF  M NLR  K YV  F+       
Sbjct: 354 KDI------HKGTRRTESISLDMSKIGNMELSSTAFVKMYNLRFLKCYVG-FW------- 399

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
                    ++V LP+GL+Y+P +LR+L+WD +P+++LP  F+P+N+VEL ++ SK++Q 
Sbjct: 400 -------GKNRVLLPDGLEYMPGELRFLYWDEFPMKSLPCKFRPENIVELQMKNSKLKQL 452

Query: 433 W-EGEKAC 439
           W E + AC
Sbjct: 453 WTENKVAC 460


>gi|449494799|ref|XP_004159650.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 936

 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 201/639 (31%), Positives = 319/639 (49%), Gaps = 74/639 (11%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S+ V+ VGI GMGG+GKTT+AKA+++Q  H FE  CF+S+++  +ET+  L HLQKQ+L
Sbjct: 209 GSNDVRFVGILGMGGLGKTTVAKALYNQLYHNFEAKCFLSNIK--AETSN-LIHLQKQLL 265

Query: 63  STTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           S+ ++    +   NI       +ER+R  +LL++LDDV+++ QL  L    D F  GSRI
Sbjct: 266 SS-ITNSTNINLGNIDQGIAVLQERLRCKRLLLILDDVDDLSQLTALATSRDLFASGSRI 324

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TTRD+ +L +   +E  I  ++ ++ +EA E F   AF+ ++  E  +  S+ VV+Y 
Sbjct: 325 IITTRDRHLLNQLEVDE--ICSIDEMDDDEALELFSWHAFRNSYPSETFHQLSKQVVTYC 382

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIF 238
            G PL LEVLGS L  + +  W   L  L +I   +I      LKISF+ L     K IF
Sbjct: 383 GGLPLALEVLGSFLFGRSREEWEDTLKKLKKIPNDQIQKK---LKISFDGLNDHTYKDIF 439

Query: 239 LDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISG-NFLNMHDILQEMGRQI 294
           LD++CFF G ++++V  ILD         + +L+ + L++I   N L MHD+L++MGR+I
Sbjct: 440 LDVSCFFIGMERNYVEQILDGCGFFPRIGISVLLQRCLLTIGDKNRLMMHDLLRDMGREI 499

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VR+   K P + SRL+  +E+  VL   KGTDA EG+ L L +     L  +AF  M  L
Sbjct: 500 VRENFPKYPERHSRLFLHEEVLSVLTRQKGTDATEGLSLKLPRFSKQKLSTKAFNEMQKL 559

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL                     QL++  V +     ++ +++R++ W  +PL+ LP  F
Sbjct: 560 RLL--------------------QLNF--VDVNGDFKHISEEIRWVCWHGFPLKFLPKEF 597

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLS--------------------ALS 454
               LV ++LR S++   W+  K      ++N K+L+                     LS
Sbjct: 598 HMDKLVAMDLRYSQIRFFWKESKF-----LKNLKFLNLGHSHYLTHTPNFSKLPNLEILS 652

Query: 455 FKGCQSLRSF-PSNLH-FVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIE 512
            K C++L  F PS +   +   T+    C  L   P +   ++ LY       E  S + 
Sbjct: 653 LKDCKNLIEFLPSTISGLLKLETLLLDNCPELQLIPNLPPHLSSLYASNCTSLERTSDLS 712

Query: 513 CLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEH-FPEILEKMEHLKRIYSD 571
            +  +  L +  C +L  I      L S+  + + GC N+ + F + + +   +      
Sbjct: 713 NVKKMGSLSMSNCPKLMEIPGLDKLLDSIRVIHMEGCSNMSNSFKDTILQGWTVSGFGGV 772

Query: 572 RTPITELPSSFE-------NLPGLEVLFVEDCSKLDNLP 603
             P  E+P  F        +LP L V+     S   N P
Sbjct: 773 CLPGKEVPDWFAYKDEVSTDLPSLSVINYTKSSITTNKP 811


>gi|9965107|gb|AAG09953.1|AF175398_1 resistance protein MG63 [Glycine max]
          Length = 459

 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/429 (36%), Positives = 231/429 (53%), Gaps = 46/429 (10%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S D V +VGI G+GGIGKTTLA AI++  +  FE  CF+ +VR  S+T G L++LQ+ 
Sbjct: 31  VGSDDVVHMVGIHGLGGIGKTTLAAAIYNSIADHFEALCFLENVRETSKTHG-LQYLQRN 89

Query: 61  MLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           +LS T+ E   +         + R+++ K+L++LDDV++  QL+ L+G  D F  GSR++
Sbjct: 90  LLSETVGEDELIGVKQGISIIQHRLQQKKVLLILDDVDKREQLQALVGRPDLFCPGSRVI 149

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFK---ENHCPEDLNWHSRSVVS 177
           +TTRDK++L       K+ Y VN L  E A +     AFK    N C +D+       V+
Sbjct: 150 ITTRDKQLLACH--GVKRTYEVNELNEEYALQLLSWKAFKLEKVNPCYKDV---LNRTVT 204

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y+ G PL LEV+GS+L  +    W   L    RI   EI +I   LK+S++ L    +S+
Sbjct: 205 YSAGLPLALEVIGSNLSGRNIEQWRSTLDRYKRIPNKEIQEI---LKVSYDALEEDEQSV 261

Query: 238 FLDIACFFEGEDKDFVASILDDSESDVLD----ILIDKSLVSISGNFLNMHDILQEMGRQ 293
           FLDI+C  +  D   V  IL       ++    +L++KSL+ IS  ++ +HD++++MG++
Sbjct: 262 FLDISCCLKEYDLKEVQDILRAHYGHCMEHHIRVLLEKSLIKISDGYITLHDLIEDMGKE 321

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINL--DPRAFTNM 351
           IVR+ES +EPGKRSRLW   +I       +GT  IE I  D S  + + +  D  AF  M
Sbjct: 322 IVRKESPREPGKRSRLWLHTDII------QGTSQIEIICTDFSLFEEVEIEWDANAFKKM 375

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NL+        F                        G  +LP  LR L W  YP ++ P
Sbjct: 376 ENLKTLIIKNGHF----------------------TKGPKHLPDTLRVLEWWRYPSQSFP 413

Query: 412 SNFKPKNLV 420
           S+F+PK L 
Sbjct: 414 SDFRPKKLA 422


>gi|227438147|gb|ACP30563.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1799

 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 192/654 (29%), Positives = 316/654 (48%), Gaps = 65/654 (9%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D   IVGI G  GIGKTT+A+A+  + S  F+ +CF+ ++RG+  + G  E+  K  L  
Sbjct: 206 DGAMIVGICGPAGIGKTTIARALHSRLSSGFQLTCFMENLRGSCNSGGLDEYGLKLRLQE 265

Query: 65  TLSEKL-EVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
            L  K+    G  I H     ER+  +K+LI+LDDV+++ QL+ L  E + FG GSRI+V
Sbjct: 266 LLLSKIFNQNGMRIYHLGAIPERLCDLKVLIILDDVDDLQQLEALADETNWFGDGSRIIV 325

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TT D+ +LE+       IY V+    +EA + FC +AF+++  P      +         
Sbjct: 326 TTEDQELLEQH--GITNIYHVDLPTEKEARKIFCRYAFRQSLPPYGYENLAERATELCGN 383

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            P  L V+GS L  K++  W  +   L R+  S I  I  +L++ ++ L  + + +F  I
Sbjct: 384 LPFGLRVMGSMLRGKKEDDWESI---LCRLENSNIPKIEAVLRVGYDSLHEKDQILFHLI 440

Query: 242 ACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQ 297
           A FF  E+   V ++L DS  DV   L  L  KSL+ IS    + MH +LQ++GRQ +++
Sbjct: 441 AVFFNYENDGHVKTMLADSGLDVRLGLKTLAYKSLIKISSEGEVVMHKLLQQVGRQAIQR 500

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIK-GINLDPRAFTNMSNLRL 356
           +   EP KR  L D  +I  VL+++ G+ ++ GI  D+S IK  +++  R F +M  LR 
Sbjct: 501 Q---EPWKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDDMDISARVFKSMRTLRF 557

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
            + Y  +                +  +V LP  +++ P +L+ LHW+ YP + LP  F P
Sbjct: 558 LRVYNTRCD--------------TNVRVHLPEDMEF-PPRLKLLHWEVYPRKCLPRTFCP 602

Query: 417 KNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI 476
           ++LVEL+L  +++EQ WEG         Q    L  +    C  L+  P   +      +
Sbjct: 603 EHLVELHLTDTQLEQLWEG--------TQPLTSLKKMVLVSCLCLKELPDLANATNLEIL 654

Query: 477 NFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFC 536
           +   C +L+                    E+ SS+  L  L+ LD+  CK+L+ + T F 
Sbjct: 655 DVCGCQSLV--------------------EIHSSVGNLHRLQSLDMIFCKKLQVVPTLF- 693

Query: 537 KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
            L SL +L+++G   +   P+I   +  L       T + E   S      L+ L +  C
Sbjct: 694 NLTSLESLVIMGSYQMRELPDISTTIRELS---IPETMLEEFLESTRLWSHLQCLEIFGC 750

Query: 597 SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           +       +      +  ++ + + I ++P  +   + L+ L    C  L S P
Sbjct: 751 AITHQFMAHPSQRNLM--VMRSVTGIERIPDCIKCLHGLKELSIYGCPKLASLP 802



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 188/601 (31%), Positives = 292/601 (48%), Gaps = 78/601 (12%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +D       VGI G  GIGKTT+A+A+  + S  F+ SCF+ ++RG+   +G  E+  K 
Sbjct: 1122 LDDEGGAMFVGICGPAGIGKTTIARALHSRLSSGFQHSCFMENLRGSCCNSGLDEYGLKL 1181

Query: 61   MLSTTLSEKL-EVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
             L   L  K+    G  I H     ER+   K+LI+LDDV+++ QL+ L  E   FG GS
Sbjct: 1182 RLQELLLSKIFNQNGMRIYHLGAIPERLCDQKVLIILDDVDDLKQLEALADETKWFGDGS 1241

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            R+++                       LE  +A + FC  AF++   P         VV+
Sbjct: 1242 RVILM----------------------LEL-DARQIFCRIAFRQLSAPHGFEKLVERVVN 1278

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                 PL L V+GSSL  K+   W  +L    R+  S   DI  +L++ ++ L    + +
Sbjct: 1279 LCSNLPLGLRVMGSSLRRKKVDDWEAILQ---RLENSLNRDIEGVLRVGYDNLHKDDQFL 1335

Query: 238  FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGRQ 293
            F  IACFF  +D D V ++L DS  DV   L  L  KSL+ IS    + MH +LQ++GR+
Sbjct: 1336 FQLIACFFNYQDDDRVKAMLVDSNLDVRLGLKTLSYKSLIQISAEGTIVMHKLLQQVGRE 1395

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMS 352
             V  +   EP KR  L D  +I  VL+++  + ++ GI  D S I  G+ +  +AF  M 
Sbjct: 1396 AVHLQ---EPRKRQILIDAHQICDVLENDYDSASVMGISFDTSTIPNGVCISAQAFRTMR 1452

Query: 353  NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            +LR         YE  + P++         ++ LP  + + P  LR LHW+ YP + LP 
Sbjct: 1453 DLRFL-----SIYETRRDPNV---------RMHLPEDMSF-PPLLRLLHWEVYPGKCLPH 1497

Query: 413  NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
              +P++LVEL    SK+EQ W+G        IQ    L  +   G  SL+  P   +   
Sbjct: 1498 TLRPEHLVELCFVNSKLEQLWQG--------IQPLTNLKKMDLSGSLSLKEVPDLSNATH 1549

Query: 473  PVTINFSYCVNLIEFPQISGKVTRLYLGQ----SAIEEVPSSIECLTDLEVLDLRGCKRL 528
               +N + C +L+E P   G + +L   +     +++  PS +  L  LE L++ GC +L
Sbjct: 1550 LKRLNLTGCWSLVEIPSSIGDLHKLEELEINLCISLQVFPSHLN-LASLETLEMVGCWQL 1608

Query: 529  KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT-----PITELPSSFE 583
            ++I   +   +SLV    +G   LE FPE L      KR+ + ++     P  E+P+ F+
Sbjct: 1609 RKI--PYVSTKSLV----IGDTMLEEFPESL--CLEAKRVITQQSFRAYFPGKEMPAEFD 1660

Query: 584  N 584
            +
Sbjct: 1661 D 1661



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 104/258 (40%), Gaps = 37/258 (14%)

Query: 563 EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAAS 620
           EHL  ++   T + +L    + L  L+ + +  C  L  LPD  N  +LE L   +    
Sbjct: 603 EHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEILD--VCGCQ 660

Query: 621 AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
           ++ ++ SSV   + L+SLD   CK L+  P  F L  S   L+ +  Y +RE+P     +
Sbjct: 661 SLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLT-SLESLVIMGSYQMRELPDISTTI 719

Query: 681 SSLEILYLSGNNFESLPAIIKQMSQLRFI----------HLEDFNML-----QSLPELPL 725
             L I       F     +   +  L             H    N++       +  +P 
Sbjct: 720 RELSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPD 779

Query: 726 CLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPE 785
           C+K LH                L+ L + GC  L SLPELP  L  L +  C  L +L  
Sbjct: 780 CIKCLH---------------GLKELSIYGCPKLASLPELPRSLTTLTVYKCPSLETLEP 824

Query: 786 LPLCLQL--LTVRNCNRL 801
            P   ++  L+  +C RL
Sbjct: 825 FPFGARIEDLSFLDCFRL 842



 Score = 45.4 bits (106), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 131/328 (39%), Gaps = 60/328 (18%)

Query: 649 FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYL-SGNNFESLPAIIKQMSQLR 707
            PRTF      +  LH++D  + ++ +    L+SL+ + L S    + LP +    +   
Sbjct: 596 LPRTFCP--EHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATN--- 650

Query: 708 FIHLEDFNMLQSLPELPLCLKYLH------LIDCKMLQSLPVL--PFCLESLDLTGCNML 759
            + + D    QSL E+   +  LH      +I CK LQ +P L     LESL + G   +
Sbjct: 651 -LEILDVCGCQSLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQM 709

Query: 760 RSLPELPLC-----------------------LQYLNLEDCNMLRSLPELPLCLQLLTVR 796
           R LP++                          LQ L +  C +       P    L+ +R
Sbjct: 710 RELPDISTTIRELSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMR 769

Query: 797 NCNRLQSLPEILLCLQELDASVLEKLSKHS-PDLQWAPESLKSAAICFEFTNCLKLNGKA 855
           +   ++ +P+ + CL       L++LS +  P L   PE L  +        C  L    
Sbjct: 770 SVTGIERIPDCIKCLHG-----LKELSIYGCPKLASLPE-LPRSLTTLTVYKCPSLETLE 823

Query: 856 NNKILADSLLRIRHMA-IASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSS 914
                A    RI  ++ +   RLG +     +L   + S + LPG  +P  F +++ G+ 
Sbjct: 824 PFPFGA----RIEDLSFLDCFRLGRKA---RRLITQQSSRVCLPGRNVPAEFHHRAIGNF 876

Query: 915 ICIQLPPHSSCRNLIGFAFCAVLDSKKV 942
           + I       C N   F  CAV+  K+V
Sbjct: 877 VAI-------CSNAYRFKICAVISPKQV 897


>gi|297791243|ref|XP_002863506.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309341|gb|EFH39765.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1168

 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 198/642 (30%), Positives = 302/642 (47%), Gaps = 98/642 (15%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG--GLEHLQKQ 60
           + +  +IV + GM GIGKT LAK +  +   +     F+   + +SE +   GLE +QK 
Sbjct: 237 NDNETRIVAVVGMPGIGKTYLAKKLLAKLETKIVRHVFI---QFDSERSKYQGLEWVQKT 293

Query: 61  MLSTTLSEKLEVAGP---NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           ++   L +    +G    N+    KE++R  K+++V D+V +  Q++ L    D   +GS
Sbjct: 294 IVEDLLKKDYPTSGSEGGNVLENWKEQLREKKIVVVFDNVTDQKQIEPL-KNCDWIKKGS 352

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPE---DLNWHSRS 174
           RIV+TTRDK + E    +   +Y V GL  +++ E F     +   C     +    SR 
Sbjct: 353 RIVITTRDKSLTETLPCD---LYEVPGLNDKDSLEFF-----RSQICSNLEGNFMELSRK 404

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNK-LTPR 233
           +V +  GNPL LE  G  L  K +  W K L  L R+   E+ ++   L+  F K L  +
Sbjct: 405 IVDFAGGNPLALEAFGKELKKKSEDCWEKRLGTLTRVSSEEMREV---LRNIFEKDLDEK 461

Query: 234 VKSIFLDIACFFEGEDKDFVASILDD--------SESDVLDILIDKSLVSISGNFLNMHD 285
            +  FLDI CFF   D+ +V S+LD            +V D L+DK L+ IS   + +HD
Sbjct: 462 QREAFLDIVCFFRSHDESYVTSLLDSVDPKSAEAGREEVRD-LVDKFLIHISNGRVEIHD 520

Query: 286 ILQEMGRQIVRQESEKEPGKRSRLWDPKEISRV----LKHNKGTDAIEGIFLDLSKIKGI 341
           IL  MG+++V   +        + W     S V    L+  +G D + GI +D+SK++ +
Sbjct: 521 ILFTMGKELVETTN--------KYWMLSSNSAVSADALRKKRGRDQVRGIVIDMSKMEEM 572

Query: 342 NLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKK--LRY 399
            LD + F  MS+LR  K Y           S+      +  K+ LP+ L++ PK   +RY
Sbjct: 573 PLDNQTFVGMSSLRYLKVY----------NSLCPRHCEARCKLNLPDELEF-PKNNIIRY 621

Query: 400 LHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEK---------------------- 437
           L W  +P + LPS F+PK+L++L L  SK+   W   K                      
Sbjct: 622 LDWMNFPGKELPSEFEPKDLIDLRLPYSKIISLWNRVKDTPKLKWVDLSHSSKLSSLSEL 681

Query: 438 ------------AC-----VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
                        C     +P ++Q  K L  L+ +GC SL S P  +      T+  S 
Sbjct: 682 SEAPNLLRLNLEGCTSLKELPEAMQKMKNLVFLNLRGCTSLLSLP-KITMDSLKTLILSD 740

Query: 481 CVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS 540
           C     F  IS  +  LYL  +AI  +PS+I  L  L +L+L  CK L  +     KL+S
Sbjct: 741 CSQFQTFEVISEHLETLYLNGTAINGLPSAIGNLDRLILLNLIDCKNLVTLPDCLGKLKS 800

Query: 541 LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSF 582
           L  L L  C  L+ FP++  KME L+ +  D T I E+P S 
Sbjct: 801 LQELKLSRCSKLKPFPDVTAKMESLRVLLLDGTSIAEMPGSI 842



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 112/480 (23%), Positives = 186/480 (38%), Gaps = 102/480 (21%)

Query: 616  LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
            L   +++ +LP ++     L  L+   C  L S P+  +  L  + L   S +   E+  
Sbjct: 692  LEGCTSLKELPEAMQKMKNLVFLNLRGCTSLLSLPKITMDSLKTLILSDCSQFQTFEVIS 751

Query: 676  EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH---L 732
            E      LE LYL+G     LP+ I  + +L  ++L D   L +LP+    LK L    L
Sbjct: 752  E-----HLETLYLNGTAINGLPSAIGNLDRLILLNLIDCKNLVTLPDCLGKLKSLQELKL 806

Query: 733  IDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP-------------------------- 766
              C  L+  P +   +ESL +   +   S+ E+P                          
Sbjct: 807  SRCSKLKPFPDVTAKMESLRVLLLDGT-SIAEMPGSIYDLSLLRRLCLSRNDDIHTLRFD 865

Query: 767  ----LCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKL 822
                  L++L L+ C  L SLP LP  LQ L    C  L+++                  
Sbjct: 866  MGQMFHLKWLELKYCKNLISLPILPPNLQCLNAHGCTSLRTVA----------------- 908

Query: 823  SKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMA 882
               SP  Q  P   +     F FTNC +L   + N I+  S ++ +   +++ R   +  
Sbjct: 909  ---SP--QTLPTPTEQIHSTFIFTNCYELEQVSKNAII--SYVQKKSKLMSADRYNQDFV 961

Query: 883  INEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKV 942
                +          PG +IP WF++Q+ GS + ++LP H +   LIG A C V+     
Sbjct: 962  FKSLIG------TCFPGYDIPAWFNHQALGSVLTLKLPQHWNAGRLIGIALCVVVSFNG- 1014

Query: 943  DSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDL---------IDSDRVILGFKP 993
                    Y      L++K   E  +V L   S  +             ++D + + +  
Sbjct: 1015 --------YKDQSNSLQVKCTCEFTNVSLSPESFIVGGFSEPGDETHTFEADHIFICYTT 1066

Query: 994  CLNVG----FPD------GYHHTIATFKFFAERKFYKIKRCGLCPVYANPSETKDNTFTI 1043
             LN+     FP       G+  T  T    +E    K+ +CG   VY  P E +++++ +
Sbjct: 1067 LLNIKKHQQFPSATEVSLGFQVTNGT----SEVAKCKVMKCGFSLVY-EPDEVENSSWKV 1121


>gi|227438253|gb|ACP30616.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1791

 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 192/654 (29%), Positives = 316/654 (48%), Gaps = 65/654 (9%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D   IVGI G  GIGKTT+A+A+  + S  F+ +CF+ ++RG+  + G  E+  K  L  
Sbjct: 206 DGAMIVGICGPAGIGKTTIARALHSRLSSGFQLTCFMENLRGSCNSGGLDEYGLKLRLQE 265

Query: 65  TLSEKL-EVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
            L  K+    G  I H     ER+  +K+LI+LDDV+++ QL+ L  E + FG GSRI+V
Sbjct: 266 LLLSKIFNQNGMRIYHLGAIPERLCDLKVLIILDDVDDLQQLEALADETNWFGDGSRIIV 325

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TT D+ +LE+       IY V+    +EA + FC +AF+++  P      +         
Sbjct: 326 TTEDQELLEQH--GITNIYHVDLPTEKEARKIFCRYAFRQSLPPYGYENLAERATELCGN 383

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            P  L V+GS L  K++  W  +   L R+  S I  I  +L++ ++ L  + + +F  I
Sbjct: 384 LPFGLRVMGSMLRGKKEDDWESI---LCRLENSNIPKIEAVLRVGYDSLHEKDQILFHLI 440

Query: 242 ACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQ 297
           A FF  E+   V ++L DS  DV   L  L  KSL+ IS    + MH +LQ++GRQ +++
Sbjct: 441 AVFFNYENDGHVKTMLADSGLDVRLGLKTLAYKSLIKISSEGEVVMHKLLQQVGRQAIQR 500

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIK-GINLDPRAFTNMSNLRL 356
           +   EP KR  L D  +I  VL+++ G+ ++ GI  D+S IK  +++  R F +M  LR 
Sbjct: 501 Q---EPWKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDDMDISARVFKSMRTLRF 557

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
            + Y  +                +  +V LP  +++ P +L+ LHW+ YP + LP  F P
Sbjct: 558 LRVYNTRCD--------------TNVRVHLPEDMEF-PPRLKLLHWEVYPRKCLPRTFCP 602

Query: 417 KNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI 476
           ++LVEL+L  +++EQ WEG         Q    L  +    C  L+  P   +      +
Sbjct: 603 EHLVELHLTDTQLEQLWEG--------TQPLTSLKKMVLVSCLCLKELPDLANATNLEIL 654

Query: 477 NFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFC 536
           +   C +L+                    E+ SS+  L  L+ LD+  CK+L+ + T F 
Sbjct: 655 DVCGCQSLV--------------------EIHSSVGNLHRLQSLDMIFCKKLQVVPTLF- 693

Query: 537 KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
            L SL +L+++G   +   P+I   +  L       T + E   S      L+ L +  C
Sbjct: 694 NLTSLESLVIMGSYQMRELPDISTTIRELS---IPETMLEEFLESTRLWSHLQCLEIFGC 750

Query: 597 SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           +       +      +  ++ + + I ++P  +   + L+ L    C  L S P
Sbjct: 751 AITHQFMAHPSQRNLM--VMRSVTGIERIPDCIKCLHGLKELSIYGCPKLASLP 802



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 188/601 (31%), Positives = 292/601 (48%), Gaps = 78/601 (12%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +D       VGI G  GIGKTT+A+A+  + S  F+ SCF+ ++RG+   +G  E+  K 
Sbjct: 1066 LDDEGGAMFVGICGPAGIGKTTIARALHSRLSSGFQHSCFMENLRGSCCNSGLDEYGLKL 1125

Query: 61   MLSTTLSEKL-EVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
             L   L  K+    G  I H     ER+   K+LI+LDDV+++ QL+ L  E   FG GS
Sbjct: 1126 RLQELLLSKIFNQNGMRIYHLGAIPERLCDQKVLIILDDVDDLKQLEALADETKWFGDGS 1185

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            R+++                       LE  +A + FC  AF++   P         VV+
Sbjct: 1186 RVILM----------------------LEL-DARQIFCRIAFRQLSAPHGFEKLVERVVN 1222

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                 PL L V+GSSL  K+   W  +L    R+  S   DI  +L++ ++ L    + +
Sbjct: 1223 LCSNLPLGLRVMGSSLRRKKVDDWEAILQ---RLENSLNRDIEGVLRVGYDNLHKDDQFL 1279

Query: 238  FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGRQ 293
            F  IACFF  +D D V ++L DS  DV   L  L  KSL+ IS    + MH +LQ++GR+
Sbjct: 1280 FQLIACFFNYQDDDRVKAMLVDSNLDVRLGLKTLSYKSLIQISAEGTIVMHKLLQQVGRE 1339

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMS 352
             V  +   EP KR  L D  +I  VL+++  + ++ GI  D S I  G+ +  +AF  M 
Sbjct: 1340 AVHLQ---EPRKRQILIDAHQICDVLENDYDSASVMGISFDTSTIPNGVCISAQAFRTMR 1396

Query: 353  NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            +LR         YE  + P++         ++ LP  + + P  LR LHW+ YP + LP 
Sbjct: 1397 DLRFL-----SIYETRRDPNV---------RMHLPEDMSF-PPLLRLLHWEVYPGKCLPH 1441

Query: 413  NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
              +P++LVEL    SK+EQ W+G        IQ    L  +   G  SL+  P   +   
Sbjct: 1442 TLRPEHLVELCFVNSKLEQLWQG--------IQPLTNLKKMDLSGSLSLKEVPDLSNATH 1493

Query: 473  PVTINFSYCVNLIEFPQISGKVTRLYLGQ----SAIEEVPSSIECLTDLEVLDLRGCKRL 528
               +N + C +L+E P   G + +L   +     +++  PS +  L  LE L++ GC +L
Sbjct: 1494 LKRLNLTGCWSLVEIPSSIGDLHKLEELEINLCISLQVFPSHLN-LASLETLEMVGCWQL 1552

Query: 529  KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT-----PITELPSSFE 583
            ++I   +   +SLV    +G   LE FPE L      KR+ + ++     P  E+P+ F+
Sbjct: 1553 RKI--PYVSTKSLV----IGDTMLEEFPESL--CLEAKRVITQQSFRAYFPGKEMPAEFD 1604

Query: 584  N 584
            +
Sbjct: 1605 D 1605



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 104/258 (40%), Gaps = 37/258 (14%)

Query: 563 EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAAS 620
           EHL  ++   T + +L    + L  L+ + +  C  L  LPD  N  +LE L   +    
Sbjct: 603 EHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEILD--VCGCQ 660

Query: 621 AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
           ++ ++ SSV   + L+SLD   CK L+  P  F L  S   L+ +  Y +RE+P     +
Sbjct: 661 SLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLT-SLESLVIMGSYQMRELPDISTTI 719

Query: 681 SSLEILYLSGNNFESLPAIIKQMSQLRFI----------HLEDFNML-----QSLPELPL 725
             L I       F     +   +  L             H    N++       +  +P 
Sbjct: 720 RELSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPD 779

Query: 726 CLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPE 785
           C+K LH                L+ L + GC  L SLPELP  L  L +  C  L +L  
Sbjct: 780 CIKCLH---------------GLKELSIYGCPKLASLPELPRSLTTLTVYKCPSLETLEP 824

Query: 786 LPLCLQL--LTVRNCNRL 801
            P   ++  L+  +C RL
Sbjct: 825 FPFGARIEDLSFLDCFRL 842



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 131/328 (39%), Gaps = 60/328 (18%)

Query: 649 FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYL-SGNNFESLPAIIKQMSQLR 707
            PRTF      +  LH++D  + ++ +    L+SL+ + L S    + LP +    +   
Sbjct: 596 LPRTFCP--EHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATN--- 650

Query: 708 FIHLEDFNMLQSLPELPLCLKYLH------LIDCKMLQSLPVL--PFCLESLDLTGCNML 759
            + + D    QSL E+   +  LH      +I CK LQ +P L     LESL + G   +
Sbjct: 651 -LEILDVCGCQSLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQM 709

Query: 760 RSLPELPLC-----------------------LQYLNLEDCNMLRSLPELPLCLQLLTVR 796
           R LP++                          LQ L +  C +       P    L+ +R
Sbjct: 710 RELPDISTTIRELSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMR 769

Query: 797 NCNRLQSLPEILLCLQELDASVLEKLSKHS-PDLQWAPESLKSAAICFEFTNCLKLNGKA 855
           +   ++ +P+ + CL       L++LS +  P L   PE L  +        C  L    
Sbjct: 770 SVTGIERIPDCIKCLHG-----LKELSIYGCPKLASLPE-LPRSLTTLTVYKCPSLETLE 823

Query: 856 NNKILADSLLRIRHMA-IASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSS 914
                A    RI  ++ +   RLG +     +L   + S + LPG  +P  F +++ G+ 
Sbjct: 824 PFPFGA----RIEDLSFLDCFRLGRKA---RRLITQQSSRVCLPGRNVPAEFHHRAIGNF 876

Query: 915 ICIQLPPHSSCRNLIGFAFCAVLDSKKV 942
           + I       C N   F  CAV+  K+V
Sbjct: 877 VAI-------CSNAYRFKICAVISPKQV 897


>gi|227438203|gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1555

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 239/856 (27%), Positives = 383/856 (44%), Gaps = 138/856 (16%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNS-ETAGGLEHLQKQML 62
           S+ V ++GIWGMGGIGKT++AK ++DQ S  F   CF+ +++  S E    L+H QK+ML
Sbjct: 206 SNEVVVLGIWGMGGIGKTSIAKCLYDQLSPRFRARCFIENIKSVSKEHDHDLKHFQKEML 265

Query: 63  STTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
            + LS+ + +          K+R+   K+ +VLD V++V Q+  L  E   FG GSRI++
Sbjct: 266 CSILSDDISLWSVEAGCQEIKKRLGHQKVFLVLDGVDKVAQVHALAKEKHWFGPGSRIII 325

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRD  +L     E   +Y VN L  ++A + F   AF+     +     S      + G
Sbjct: 326 TTRDMGLLNTCGVE--NVYEVNCLNDKDALKMFKQIAFEGPPPCDGFEQLSIRATRLSHG 383

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEI-HDIYDILKISFNKLTPRVKSIFLD 240
            P  ++    +L L+ ++   +V  +     ES +  +  +ILKIS+  L    +++FL 
Sbjct: 384 LPSAIQ--AHALFLRGRTAAPEVWEEALTALESSLDENTMEILKISYEGLPKPHQNVFLH 441

Query: 241 IACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIVR 296
           +AC F G+    + S+L       S  + +L +KSL+ IS N  + MH ++++M R+++R
Sbjct: 442 VACLFNGDTLQRINSLLHGPIPQSSLWIRVLAEKSLIKISTNGSVIMHKLVEQMAREMIR 501

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNK-GTDAIEGIFLDLSKIK-GINLDPRAFTNMSNL 354
            ++      R  L DP++I   L + + G +  E + L    +    ++      +M NL
Sbjct: 502 DDTSL---ARKFLRDPQDICYALTNFRDGGEQTECMSLHSCNLACAFSMKASVVGHMHNL 558

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           +  K Y            + + E    SK+QL      LP  LR  HWD +PLRTLPS+ 
Sbjct: 559 KFLKVY----------KHVDSRE----SKLQLIPDQHLLPPSLRLFHWDAFPLRTLPSDA 604

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
            P  LVELNLR S +E  W G            + L  L   G + L+            
Sbjct: 605 DPYFLVELNLRHSDLETLWSGTPM--------MESLKRLDVTGSKHLK------------ 644

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
                      + P +SG                     +T LE L L  C RLK I  S
Sbjct: 645 -----------QLPDLSG---------------------ITSLEELALEHCTRLKGIPES 672

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP-SSFENLP-GLEVLF 592
             K  S+  L L  C  L    +   +   +++      P  ++   +  N+  G ++ F
Sbjct: 673 IGKRSSIKKLKLSYCGGLRSALKFFVRKPTMQQHIGLEFPDAKVKMDALINISIGGDISF 732

Query: 593 VEDCSKLDNLPDNIGSLEYLYY------ILAAASAISQLPSSVALSNMLRSLDS---SHC 643
            E CSK        G+ EY+ +       + ++  + Q P  ++  N   SL     SH 
Sbjct: 733 -EFCSKFR------GTAEYVSFNSDQQIPVTSSMNLQQSPWLISECNRFNSLSIMRFSHK 785

Query: 644 KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEI---LYLSGNNFESLPAII 700
           +  ESF          +  L + +  +R+IP  +  +  LE    L LSGN+FESLP  +
Sbjct: 786 ENGESFSFDSFPDFPDLKELKLVNLNIRKIPSGVHGIHKLEFIEKLDLSGNDFESLPEAM 845

Query: 701 KQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP--------FCLESLD 752
             +++L+ + L +   L+ LP+L   ++ L L +C+ L+SL  L         +CL  L 
Sbjct: 846 VSLTRLKTLWLRNCFKLKELPKLTQ-VQTLTLTNCRNLRSLVKLSETSEEQGRYCLLELC 904

Query: 753 LTGCNMLRSLPE--------------------LPLCLQYLN------LEDCNMLRSLPEL 786
           L  CN +  L +                    LP  ++ L       L +C  LRS+ +L
Sbjct: 905 LENCNNVEFLSDQLIYFIKLTNLDLSGHEFVALPSSIRDLTSLVTLCLNNCKNLRSVEKL 964

Query: 787 PLCLQLLTVRNCNRLQ 802
           PL LQ L    C+ L+
Sbjct: 965 PLSLQFLDAHGCDSLE 980



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 2/112 (1%)

Query: 80   FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKI 139
             T+ R +  K+L V D V +  Q + +    + F  GSRI++ T+DK VLE+   E   +
Sbjct: 1084 ITEARNKHRKVLHVADGVKDSEQGQWIKEYANWFAPGSRIILITQDKSVLEE--SEVNHV 1141

Query: 140  YRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGS 191
            Y V  L ++EA + F  FAF++ + P +    S   V      P+ + + GS
Sbjct: 1142 YEVGSLRYDEALQLFSRFAFRQPYPPPEFERLSVRAVQLAGFLPMAIRLFGS 1193



 Score = 40.4 bits (93), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 113/298 (37%), Gaps = 59/298 (19%)

Query: 460  SLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEV 519
            ++R  PS +H            ++ +EF      + +L L  +  E +P ++  LT L+ 
Sbjct: 811  NIRKIPSGVH-----------GIHKLEF------IEKLDLSGNDFESLPEAMVSLTRLKT 853

Query: 520  LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELP 579
            L LR C +LK +     KL  + TL L  C NL    ++ E  E   R            
Sbjct: 854  LWLRNCFKLKELP----KLTQVQTLTLTNCRNLRSLVKLSETSEEQGRYC---------- 899

Query: 580  SSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLD 639
                    L  L +E+C+ ++ L D +     L  +  +      LPSS+     L +L 
Sbjct: 900  --------LLELCLENCNNVEFLSDQLIYFIKLTNLDLSGHEFVALPSSIRDLTSLVTLC 951

Query: 640  SSHCKGLESFPRT--FLLGLSAMG---------LLHISDYAVREIPQEIAYLSSLEILYL 688
             ++CK L S  +    L  L A G         + H  D    E+ Q   +  +    Y+
Sbjct: 952  LNNCKNLRSVEKLPLSLQFLDAHGCDSLEEADSVEHFRDKPNEEVQQRTFFKETDMPFYV 1011

Query: 689  SGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF 746
              +    +  II         HL           +P+C+  + ++   +LQS  V+ F
Sbjct: 1012 LNHQATRICHII---------HLLKNTTAHMFIGIPICITLVAVLFASLLQSATVISF 1060


>gi|449447729|ref|XP_004141620.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 838

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 206/679 (30%), Positives = 314/679 (46%), Gaps = 103/679 (15%)

Query: 90  LLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK-KIYRVNGLEFE 148
           +LIV D + E  QL+ L G  D FG GSRI++TT +K +      ++K + Y V  L  E
Sbjct: 68  VLIVFDGITERSQLEMLAGSPDWFGAGSRIIITTTNKNIFHHPNFKDKVQEYNVELLSHE 127

Query: 149 EAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDL 208
            AF  FC  AF ++   ++++     ++      PL LE +  SL  +    W   L + 
Sbjct: 128 AAFSLFCKLAFGDHPHTQNMDDLCNEMIEKVGRLPLALEKIAFSLYGQNIDVWEHTLKNF 187

Query: 209 NRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDD----SESDV 264
           +++    I    D+LK S+  L    + IFLD+ACF  GE  D V  IL      S    
Sbjct: 188 HQVVYDNIFS--DVLKSSYEGLEAESQQIFLDLACFLNGEKVDRVIQILQGFGYTSPQTN 245

Query: 265 LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKG 324
           L +L+D+ L+ I    + MH ++  MG++IV +E      +++R+W   +  R+   N  
Sbjct: 246 LQLLVDRCLIDILDGHIQMHILILCMGQEIVHRELGN--CQQTRIWLRDDARRLFHENNE 303

Query: 325 TDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKV 384
              I GI +DL + + + L  +AF +MS LR+ +                       + V
Sbjct: 304 LKYIRGIVMDLEEEEELVLKAKAFADMSELRILRI----------------------NNV 341

Query: 385 QLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSI 444
           QL   ++ L  KL  L+W  YP + LPS F+P +L+EL+L  S VE+ W G         
Sbjct: 342 QLSEDIECLSNKLTLLNWPGYPSKYLPSTFQPPSLLELHLPGSNVERLWNG--------T 393

Query: 445 QNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSA- 503
           QNFK L  +     + L   P           NFS      E P    K+ RL L     
Sbjct: 394 QNFKNLKEIDASDSKFLVETP-----------NFS------EAP----KLRRLILRNCGR 432

Query: 504 IEEVPSSIECLTDLEVLDLRGCKRLKRISTSF-CKLRSLVTLILLGCLNLEHFPEILEKM 562
           + +V SSI  L  L +LD+ GC   +  S    CK  SL TL+L  C  LE FPE    M
Sbjct: 433 LNKVHSSINSLHRLILLDMEGCVSFRSFSFPVTCK--SLKTLVLSNC-GLEFFPEFGCVM 489

Query: 563 EHLKRIYSDRTPI------------------------TELPSSFENLPGLEVLFVEDCSK 598
            +L  ++ D T I                        + LP+    L  L+ L +  C  
Sbjct: 490 GYLTELHIDGTSINKLSPSITNLLGLVLLNLRNCIRLSSLPTEICRLSSLKTLILNGCKN 549

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
           LD +P  +  +++L  +    ++IS +P        L +L   +C+ L+S     L GL+
Sbjct: 550 LDKIPPCLRYVKHLEELDIGGTSISTIP-------FLENLRILNCERLKSNIWHSLAGLA 602

Query: 659 AMGLLHISDYAV-------REIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
           A  L  ++D  +        +IP ++   SSLEIL LS N+FE L   IKQ+  L+ ++L
Sbjct: 603 AQYLRSLNDLNLSDCNLVDEDIPNDLELFSSLEILDLSSNHFERLSESIKQLINLKVLYL 662

Query: 712 EDFNMLQSLPELPLCLKYL 730
            D N L+ +P+LP  +KY+
Sbjct: 663 NDCNKLKQVPKLPKSIKYV 681


>gi|357500729|ref|XP_003620653.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495668|gb|AES76871.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1235

 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 218/728 (29%), Positives = 340/728 (46%), Gaps = 134/728 (18%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS D V  +GI GMGGIGKTTLA  ++ Q SH+F  SCF+ DV        G    Q+Q
Sbjct: 211 LDSVDGVCAIGICGMGGIGKTTLAMTLYGQISHQFSASCFIDDVSKIYRLYDGPLDAQRQ 270

Query: 61  MLSTTLS-EKLEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +L  T+  E  ++    +     + R+R  K L++ D+V++V QL+++    +  G GSR
Sbjct: 271 ILLQTVGIEHHQICNRYSATDLIRRRLRHEKALLIFDNVDQVEQLEKIAVHREWLGAGSR 330

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFK-ENHCPEDLNWHSRSVVS 177
           IV+ +RD+ +L+++  +   +Y+V  +   +++E FC  AFK E     D    +  ++ 
Sbjct: 331 IVIISRDEHILKEYGVD--VVYKVPLMNSTDSYELFCRKAFKVEKIIMSDYQNLANEILD 388

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y KG PL ++VLGS L     + W   L    R+ ES  +D+ D+L +SF+     VK++
Sbjct: 389 YAKGLPLAIKVLGSFLFGHSVAEWKSAL---ARLRESPHNDVMDVLHLSFDGPEKYVKNV 445

Query: 238 FLDIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQ 297
                C F  +                L +LIDKSL+SI    + MH +L+E+GR+IV++
Sbjct: 446 L--NCCGFHADIG--------------LGVLIDKSLISIEDANIKMHSLLEELGRKIVQE 489

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
            S KE  K SR+W  K++  V+  N   + +E IFL+     GI+++   F+ MSNLRL 
Sbjct: 490 NSSKEQRKWSRIWSKKQLYNVMMENM-EEHVEAIFLN---DDGIDMNVEHFSKMSNLRLL 545

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
             Y           + S     +Y +      L  L  KLRY  W+ YP   LP +F P 
Sbjct: 546 IIY-----------NNSAWNYTTYKRPCFHGKLSCLSNKLRYFDWEHYPFWELPLSFHPN 594

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
            LVEL L+ S  +Q W+ +K                                        
Sbjct: 595 ELVELILKNSSFKQLWKSKKY--------------------------------------- 615

Query: 478 FSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
                    FP +      L L  S IE++    E   +LE L+L  C++L  + +S   
Sbjct: 616 ---------FPNLKA----LDLSDSKIEKIIDFGE-FPNLESLNLERCEKLVELDSSIGL 661

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS 597
           LR LV L L  C+NL                         +P+S   L  LE L++  CS
Sbjct: 662 LRKLVYLNLDYCINL-----------------------VSIPNSIFCLSSLEDLYMCGCS 698

Query: 598 KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGL 657
           K+ N   N+  +E  + I  +      LP+    +  L SL S +C              
Sbjct: 699 KVFNNSRNL--IEKKHDINESFHKWIILPTPTRNTYCLPSLHSLYC-------------- 742

Query: 658 SAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNML 717
             +  + IS   + ++P  I  L SLE LYL+GN F +LP+ ++++S+L ++ L+   +L
Sbjct: 743 --LRQVDISFCHLNQVPDAIEGLHSLERLYLAGNYFVTLPS-LRKLSKLEYLDLQHCKLL 799

Query: 718 QSLPELPL 725
           +SLP+LP 
Sbjct: 800 ESLPQLPF 807



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 189/516 (36%), Gaps = 133/516 (25%)

Query: 582  FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
            F   P LE L +E C KL  L  +IG L  L Y                       L+  
Sbjct: 635  FGEFPNLESLNLERCEKLVELDSSIGLLRKLVY-----------------------LNLD 671

Query: 642  HCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNN--FESLPAI 699
            +C  L S                        IP  I  LSSLE LY+ G +  F +   +
Sbjct: 672  YCINLVS------------------------IPNSIFCLSSLEDLYMCGCSKVFNNSRNL 707

Query: 700  IKQMSQLRFIHLEDFNMLQSLP---ELPLCLKYLHLIDCKMLQSLPVLPFC--------- 747
            I++   +     E F+    LP       CL  LH + C  L+ + +  FC         
Sbjct: 708  IEKKHDIN----ESFHKWIILPTPTRNTYCLPSLHSLYC--LRQVDI-SFCHLNQVPDAI 760

Query: 748  -----LESLDLTGCNMLRSLPELPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNR 800
                 LE L L G N   +LP L     L+YL+L+ C +L SLP+LP             
Sbjct: 761  EGLHSLERLYLAG-NYFVTLPSLRKLSKLEYLDLQHCKLLESLPQLPF------------ 807

Query: 801  LQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKIL 860
              +  E    ++  D S   + + H P           A I     NC KL         
Sbjct: 808  -PTTTEQDWWIRSQDFSGYRR-TNHGP-----------ALIGLFIFNCPKL--------- 845

Query: 861  ADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLP 920
               + R R  +I    + + +  N++ ++L    IV PGSEIP W +NQS G+SI I   
Sbjct: 846  ---VERERCSSITISWMAHFIQANQQPNKLSALQIVTPGSEIPSWINNQSVGASISIDES 902

Query: 921  P--HSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYI 978
            P  + +  N+IGF  C ++     D+     F +S    +  K            N R +
Sbjct: 903  PVINDNNNNIIGFVSCVLISMAPQDTTMMHCFPLSIYMKMGAKR-----------NRRKL 951

Query: 979  EDLIDSDRVILGFKPCLNVGFPDGYHHTIATFKFFAERKFYKIKRCGL-CPVYANPSETK 1037
              +I  D +         V FP   +    T +     K Y+ +  G     Y N  +  
Sbjct: 952  PVIIVRDLITTKSSHLWLVYFPRESYDVYGTLR----AKCYQGEVVGFEVKSYDNVEDVL 1007

Query: 1038 DNTFTINFATEVWKLDDLPSASGTLDV-EELELSPK 1072
            DN   I+ +      D  P  S   DV EE+++  K
Sbjct: 1008 DNN-EIDASLAGQSGDSSPEGSMNKDVTEEVDVGTK 1042


>gi|357499485|ref|XP_003620031.1| Resistance-gene protein [Medicago truncatula]
 gi|355495046|gb|AES76249.1| Resistance-gene protein [Medicago truncatula]
          Length = 813

 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 198/612 (32%), Positives = 307/612 (50%), Gaps = 97/612 (15%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S D V +VG++G GGIGK+TLAKAI++  + +FE  CF+ +VR NS T+  L+HLQ+++L
Sbjct: 207 SDDEVHMVGLYGTGGIGKSTLAKAIYNFIADQFEVLCFLENVRVNS-TSDNLKHLQEKLL 265

Query: 63  STTLSEKLEVAG--PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             T+   +++ G    IP   K+R+ R K+L++LDDV+++ QL+ L G LD FG GSR++
Sbjct: 266 LKTVRLDIKLGGVSQGIP-IIKQRLCRKKILLILDDVDKLDQLEALAGGLDWFGPGSRVI 324

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTR+K +L K  G E   + V GL   EA E     AFKEN  P          ++Y  
Sbjct: 325 ITTRNKHLL-KIHGIES-THAVEGLNATEALELLRWMAFKEN-VPSSHEDILNRALTYAS 381

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL + ++GS+L  +        L     I   EI  I   LK+S++ L    +S+FLD
Sbjct: 382 GLPLAIVIIGSNLVGRSVQDSMSTLDGYEEIPNKEIQRI---LKVSYDSLEKEEQSVFLD 438

Query: 241 IACFFEG----EDKDFVASILDDSESDVLDILIDKSLVS--ISGNFLNMHDILQEMGRQI 294
           IAC F+G    E K+ + +         + +L +KSL+      +++ +HD++++MG+++
Sbjct: 439 IACCFKGCKWPEVKEILHAHYGHCIVHHVAVLAEKSLMDHLKYDSYVTLHDLIEDMGKEV 498

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSN 353
           VRQES  EPG+RSRLW  ++I  VLK N GT  I+ I +    ++  I+ +  AF  M+N
Sbjct: 499 VRQESPDEPGERSRLWFERDIVHVLKKNTGTRKIKMINMKFPSMESDIDWNGNAFEKMTN 558

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           L+ F                   E   +SK      L+YLP  LR +             
Sbjct: 559 LKTF-----------------ITENGHHSK-----SLEYLPSSLRVM------------- 583

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSAL-SFKGCQSLRSFPSNLHFVC 472
              K  +  +   S   + +E  K  +   + N +YL+ +    G  +L  F        
Sbjct: 584 ---KGCIPKSPSSSSSNKKFEDMKVLI---LNNCEYLTHIPDVSGLPNLEKF-------- 629

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
               +F  C NL+                     + +S+  L  LE+L+  GC++L+   
Sbjct: 630 ----SFVRCHNLVT--------------------IHNSLRYLNRLEILNAEGCEKLE--- 662

Query: 533 TSFCKLRS--LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
            SF  L+S  L  L L  C +L+ FPE+L KM ++K I    T I +  SSF+NL  L  
Sbjct: 663 -SFPPLQSPSLQNLELSNCKSLKSFPELLCKMTNIKSILLKETSIEKFQSSFQNLSELSH 721

Query: 591 LFVEDCSKLDNL 602
           L +   +   NL
Sbjct: 722 LTISSANLKINL 733


>gi|357500063|ref|XP_003620320.1| Resistance protein [Medicago truncatula]
 gi|355495335|gb|AES76538.1| Resistance protein [Medicago truncatula]
          Length = 664

 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 212/674 (31%), Positives = 322/674 (47%), Gaps = 121/674 (17%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           S D V +VGI G GGIGKTTL+ A+++    +F+GSC++ DVRGN E  G L HLQ  +L
Sbjct: 43  SVDKVYMVGIHGTGGIGKTTLSLAVYNSIVDQFDGSCYLEDVRGNKEKHG-LIHLQNILL 101

Query: 63  STTLSEKLEVAGPNIPHFTKE-RVRRMKLLIVL--DDVNEVGQLKRLIGELDQFGQGSRI 119
           S    E  ++A  ++    KE RVR  +  ++L  D+V+++ QL+ ++GE + FG GSR+
Sbjct: 102 SKIFGEN-KIAVTSVNEGIKELRVRLKQKKVLLLLDNVDKLDQLRAIVGEPEWFGNGSRV 160

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TTRD +VL K  G EK  + V  L  +EA++      F  N             ++YT
Sbjct: 161 IITTRDTQVL-KSHGVEKT-HEVKLLLRDEAYDFLRWKTFGTNEVSPSFEDVFNRALNYT 218

Query: 180 KGNPLVLEVLGSSLCLKRKS-HWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              PL +E++GS L  K+ +  W   L    +I + EI   ++ILK+SF+ L    K +F
Sbjct: 219 SRLPLAIEIIGSHLFSKKTTEQWISALDRYEKIPKQEI---FEILKVSFDDLVQEEKDVF 275

Query: 239 LDIACFFEGEDKDFVASIL----DDSESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQ 293
           LDIACFF+GE  + V  IL     D + D +++LI+KSL+ IS  NFL +HD++++MG++
Sbjct: 276 LDIACFFKGEQLEDVEIILHAHYGDEKKDHINVLIEKSLIKISQPNFLTLHDLIEDMGKE 335

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFL--DLSKIKGINLDPRAFTNM 351
           IVR ES  +PG+RSRLW  K+I+ VL+ N GT  I G+ +  D  +   +N D  AF NM
Sbjct: 336 IVRLESPDQPGERSRLWSAKDIAEVLEENTGTSKI-GMMMCSDSDEDIVVNWDGEAFKNM 394

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT-L 410
           + LR        F E  K                      +LP  LR L    YP    L
Sbjct: 395 TKLRTLFIQSVYFSESPK----------------------HLPNSLRVLRLWEYPSEECL 432

Query: 411 PSNFKPKNLV--ELNLRCSKVEQPWEGE--------------KACVPSS----------- 443
           P +F P+ L   +LN   ++ ++ +  +              + C+P +           
Sbjct: 433 PVDFYPRQLTLCKLNFTFNRPQEVFFKKASVMNLYPPSYIYIRKCLPGAKPLGFCRKSLA 492

Query: 444 -IQNFKYLSALSF--------------------KGCQSLRSFPSNLHFVCPVTINFSYCV 482
            +  F  L+ L F                    K C  L ++  N+       + F +C 
Sbjct: 493 FLWLFCNLAMLGFDQQSEGLVPHIGPGFFPSLYKPCTGLLAYFKNMRM-----LQFHFCD 547

Query: 483 NLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLV 542
           +L   P +SG                     L +LE      C  L     S   L  L 
Sbjct: 548 SLRSIPDVSG---------------------LQNLEDFSCLRCNDLITFDDSIGLLGKLK 586

Query: 543 TLILLGCLNLEHFPEILEKMEHLKRIY-SDRTPITEL-PSSFENLPGLEVLFVEDCSKLD 600
            L ++ C  +E  P +  K+  L+ +Y S+   I  L P   E+L  L++L V  C  ++
Sbjct: 587 ILSVVSCPKIETIPPL--KLVSLEELYLSELHSIMSLSPMLDESLDKLKILKVNCCRSIN 644

Query: 601 NLPD-NIGSLEYLY 613
            +P   + SLE LY
Sbjct: 645 YIPPLKLPSLEELY 658


>gi|357474807|ref|XP_003607689.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508744|gb|AES89886.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1043

 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 207/686 (30%), Positives = 314/686 (45%), Gaps = 137/686 (19%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS D V +VGI GMGGIGKTTL   ++D+ SH+F   CF+ DV        G   +QKQ
Sbjct: 215 LDSVDDVHVVGICGMGGIGKTTLGMVLYDRISHQFGACCFIDDVSKMFRLHDGPLDVQKQ 274

Query: 61  MLSTTLSE------KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
           +L  TL E       L  A     +  + R+ R ++L++ D+V++V QL+++    +  G
Sbjct: 275 ILHQTLGENHNQICNLSTAS----NLIRRRLCRQRVLMIFDNVDKVEQLEKIGVCREWLG 330

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
           +GS+I++ +RD+ +L+ +  +E  +Y+V  L++  + +  C  AFK +H           
Sbjct: 331 EGSKIIIISRDEHILKNYGVDE--VYKVPLLDWTNSLQLLCRKAFKLDHILNSYEGLVNG 388

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           ++ Y  G PL ++VLGS L  +  S W   L    R+ ES   D+ D+L++SF+ L  + 
Sbjct: 389 ILHYANGLPLAIKVLGSFLFGRDISEWRSALA---RLKESPEKDVMDVLRLSFDGLKEQE 445

Query: 235 KSIFLDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGN-FLNMHDILQEM 290
           K IFL IACFF      ++ ++L+     +D+ L +LIDKSL+SI  + F++MH +L+E+
Sbjct: 446 KEIFLHIACFFNQVWGKYLKNVLNCCGFHADIGLRVLIDKSLISIDADGFIHMHGLLEEL 505

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVL--KHNKGTDAI----EGIFLDLSKIKGINLD 344
           GR+IV++ S KE     R+W  K+++ V+  K  K  +AI    E    D +K+  I   
Sbjct: 506 GREIVQENSSKEQRNWRRIWFVKQVNDVMLEKMEKNVEAIVLNHENDGEDDAKMVTI--- 562

Query: 345 PRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDT 404
               + M +LRL     P                     V     L    K+LRY+ W  
Sbjct: 563 VEHLSKMRHLRLLIVRCP---------------------VNTSGNLSCFSKELRYVEWSE 601

Query: 405 YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSF 464
           YP + LPS+F    LVEL L  S +EQ W+G+                            
Sbjct: 602 YPFKYLPSSFDSNQLVELILEYSSIEQLWKGK---------------------------- 633

Query: 465 PSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRG 524
                         S+  NLI+ P                 E P       +LE LDL G
Sbjct: 634 --------------SHSKNLIKMPHFG--------------EFP-------NLERLDLEG 658

Query: 525 CKRLKRISTSFCKLRSLVTLILLGC-------------LNLEHFPEILEKMEHLKRIY-- 569
           C +L ++  S   L  LV L L  C             LN+            LKR    
Sbjct: 659 CIKLVQLDPSLSLLTKLVYLNLKDCKCIIGLLSNNPRPLNIRASHSSSTTPSSLKRNMLP 718

Query: 570 ---SDRTPITE--LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQ 624
              S +TP T   L SS  +L  L + F   C+ L  +P+ IG L +L  +    +    
Sbjct: 719 KHSSLQTPTTHTNLFSSLHSLCELNLSF---CNLL-QIPNAIGCLYWLEALNLGGNNFVT 774

Query: 625 LPSSVALSNMLRSLDSSHCKGLESFP 650
           +PS   LS ++  L   HCK L+S P
Sbjct: 775 VPSLRELSKLV-YLSLEHCKLLKSLP 799



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 18/179 (10%)

Query: 562 MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAAS 620
           +E L +  S    + ++P  F   P LE L +E C KL  L  ++  L  L Y+ L    
Sbjct: 626 IEQLWKGKSHSKNLIKMPH-FGEFPNLERLDLEGCIKLVQLDPSLSLLTKLVYLNLKDCK 684

Query: 621 AISQLPSS--------------VALSNMLRSLDSSHCKGLESFPRTFLLG-LSAMGLLHI 665
            I  L S+                 S++ R++   H         T L   L ++  L++
Sbjct: 685 CIIGLLSNNPRPLNIRASHSSSTTPSSLKRNMLPKHSSLQTPTTHTNLFSSLHSLCELNL 744

Query: 666 SDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
           S   + +IP  I  L  LE L L GNNF ++P+ ++++S+L ++ LE   +L+SLP LP
Sbjct: 745 SFCNLLQIPNAIGCLYWLEALNLGGNNFVTVPS-LRELSKLVYLSLEHCKLLKSLPVLP 802



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 895 IVLPGSEIPDWFSNQSSGSSICIQLPP--HSSCRNLIGFAFCAVL 937
           IV PGSE+P WF+NQS G+ I I   P  H +  N++G   C V 
Sbjct: 869 IVTPGSEMPSWFNNQSKGNLIRIDSSPIMHDNNNNIVGCVCCVVF 913


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  236 bits (603), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 213/665 (32%), Positives = 311/665 (46%), Gaps = 99/665 (14%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFV-----SDVRGNSETAGGLE 55
           +D  D   IVGI G  GIGKTT+A+A++      F+ SCFV     SD RG  E    L 
Sbjct: 160 LDYKDGAMIVGICGPAGIGKTTIARALYSLLLSSFQLSCFVENLSGSDNRGLDEYGFKL- 218

Query: 56  HLQKQMLSTTLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQF 113
            LQ+Q+LS  L++     G  I H    +ER+   K+LIVLDDVN++ QL+ L  E   F
Sbjct: 219 RLQEQLLSKILNQN----GMRIYHLGAIQERLCDQKVLIVLDDVNDLKQLEALANETSWF 274

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSR 173
           G GSRI+VTT DK +LE+      K Y V     EEA E FC +AF+++  P+     ++
Sbjct: 275 GPGSRIIVTTEDKGLLEQH--GINKTYHVGFPSIEEALEIFCIYAFRKSSPPDGFKKLTK 332

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            V +     PL L V+GSSL  K +  W  +   L+R+  S   +I   L++ ++ L   
Sbjct: 333 RVTNVFDNLPLGLRVMGSSLRGKGEDEWEAL---LDRLETSLDRNIEGALRVGYDSLQEE 389

Query: 234 VKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLV--SISGNFLNMHDILQ 288
            +++FL IA FF     + V ++L DS  DV   L IL +KSLV  S SG  + MH +LQ
Sbjct: 390 EQALFLHIAVFFNYNKDEHVIAMLADSNLDVKQGLKILTNKSLVYRSTSGKIV-MHKLLQ 448

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAF 348
           ++GR+ ++++   EP KR  L D  EI  VL+++  T A  GI LD S I  + +   AF
Sbjct: 449 QVGRKAIQRQ---EPWKRHILIDAHEICYVLENDTDTRAALGISLDTSGINKVIISEGAF 505

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M NLR    Y  ++ + +              +V +P  L++ P  LR L W+ YP  
Sbjct: 506 KRMRNLRFLSVYNTRYVKND--------------QVDIPEDLEF-PPHLRLLRWEAYP-- 548

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
                       +L+++ S++E+ W+G         Q    L  +       L+  P   
Sbjct: 549 ------------KLDMKESQLEKLWQG--------TQPLTNLKKMDLTRSSHLKELPDLS 588

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
           +      +  SYC +L+                    E+PSS   L  LE L +  C +L
Sbjct: 589 NATNLERLELSYCKSLV--------------------EIPSSFSELRKLETLVIHNCTKL 628

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
           + + T    L SL    + GC  L+ FP I     H+ R+  D T + ELP+S      L
Sbjct: 629 EVVPT-LINLASLDFFNMHGCFQLKKFPGI---STHISRLVIDDTLVEELPTSIILCTRL 684

Query: 589 EVLFVEDCSKLDNLPDNIGSLEYL-----YYILAAASAISQLPSSVALSNMLRSLDSSHC 643
             L +           N  +L YL     Y  L        L S   L   +R L++  C
Sbjct: 685 RTLMISGSG-------NFKTLTYLPLSLTYLDLRCTGGCRNLKSLPQLPLSIRWLNACDC 737

Query: 644 KGLES 648
           + LES
Sbjct: 738 ESLES 742



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 62/273 (22%)

Query: 672 EIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
           EIP   + L  LE L +      E +P +I  ++ L F ++     L+  P +   +  L
Sbjct: 606 EIPSSFSELRKLETLVIHNCTKLEVVPTLI-NLASLDFFNMHGCFQLKKFPGISTHISRL 664

Query: 731 HLIDCKMLQSLP---VLPFCLESLDLTGCNMLRSLPELPLCLQYLNLE---DCNMLRSLP 784
            +ID  +++ LP   +L   L +L ++G    ++L  LPL L YL+L     C  L+SLP
Sbjct: 665 -VIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPLSLTYLDLRCTGGCRNLKSLP 723

Query: 785 ELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFE 844
           +LPL ++ L   +C  L+S+     C+  L++ V         DL               
Sbjct: 724 QLPLSIRWLNACDCESLESVA----CVSSLNSFV---------DLN-------------- 756

Query: 845 FTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPD 904
           FTNC KLN +    ++  S  R                          SL +LPG E+P+
Sbjct: 757 FTNCFKLNQETRRDLIQQSFFR--------------------------SLRILPGREVPE 790

Query: 905 WFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVL 937
            F++Q+ G+ + I+    S       F  C V+
Sbjct: 791 TFNHQAKGNVLTIRPESDSQFSASSRFKACFVI 823



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 63/261 (24%)

Query: 496 RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF 555
           +L + +S +E++    + LT+L+ +DL     LK +              L    NLE  
Sbjct: 549 KLDMKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPD------------LSNATNLERL 596

Query: 556 PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLEYLY 613
                ++ + K        + E+PSSF  L  LE L + +C+KL+ +P   N+ SL++  
Sbjct: 597 -----ELSYCK-------SLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFF- 643

Query: 614 YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSA-MGLLHISDYAVRE 672
                              NM        C  L+ FP     G+S  +  L I D  V E
Sbjct: 644 -------------------NM------HGCFQLKKFP-----GISTHISRLVIDDTLVEE 673

Query: 673 IPQEIAYLSSLEILYLSGN-NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
           +P  I   + L  L +SG+ NF++L  +   ++ L          L+SLP+LPL +++L+
Sbjct: 674 LPTSIILCTRLRTLMISGSGNFKTLTYLPLSLTYLDLRCTGGCRNLKSLPQLPLSIRWLN 733

Query: 732 LIDCKMLQSLPVLPFCLESLD 752
             DC+ L+S+     C+ SL+
Sbjct: 734 ACDCESLESVA----CVSSLN 750


>gi|357449875|ref|XP_003595214.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355484262|gb|AES65465.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1362

 Score =  236 bits (603), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 209/665 (31%), Positives = 331/665 (49%), Gaps = 66/665 (9%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS D V+ +GIWGMGGIGKTTLA  ++ Q SH F+ SCF+ DV        G    QKQ
Sbjct: 211 LDSVDGVRAIGIWGMGGIGKTTLALDLYGQISHRFDASCFIDDVSKIYRLHDGPLEAQKQ 270

Query: 61  MLSTTLS-EKLEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           ++  TL  E  ++    +  +  + R+   + L++LD+V++V QL+++   L+  G GSR
Sbjct: 271 IIFQTLGIEHHQICNRYSATYLIRHRLCHERALLILDNVDQVEQLEKIDVHLEWLGAGSR 330

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFK-ENHCPEDLNWHSRSVVS 177
           I++ +RD+ +L+K+  +   +Y+V  L + ++++ FC  AFK EN    +    +  ++ 
Sbjct: 331 IIIISRDEHILKKYGVD--VVYKVPLLNWRDSYKLFCRKAFKVENIIMSNYQNLANEILR 388

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y  G PL ++V+GS L     + W   L    R+ ES   D+ D+L++SF+ L    K I
Sbjct: 389 YANGLPLAIKVMGSFLFGCNVTEWKSALA---RLRESPDKDVIDVLQLSFDGLKHTEKEI 445

Query: 238 FLDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FLDIACFF  E + +V +IL+     +D+ L +LI+KSL+SI+G  + MH +L+E+GR+I
Sbjct: 446 FLDIACFFNSECEKYVKNILNCCGFHADIGLRVLINKSLISINGQNIEMHSLLEELGRKI 505

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V+  S  +P K SRLW  +++  V+   K    +E I L  ++     +D    + MSNL
Sbjct: 506 VQNSSSNDPRKWSRLWSTEQLYDVIMA-KMEKHVEAIVLKYTE----EVDAEHLSKMSNL 560

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL    V     I   PS                    L  KLRY+ W  YP + LP++F
Sbjct: 561 RLL-IIVNHTATISGFPSC-------------------LSNKLRYVEWPKYPFKYLPTSF 600

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS--NLHFVC 472
            P  LVEL L  S ++  W+ +K      + N + L     +  + +  F    NL +  
Sbjct: 601 HPNELVELILDGSNIKNLWKNKKY-----LPNLRRLDLSDSRKLEKIMDFGEFPNLEW-- 653

Query: 473 PVTINFSYCVNLIEFPQISGKVTRL-YLGQS---AIEEVPSSIECLTDLEVLDLRGCKRL 528
              +N   C  L+E     G + +L YL       +  +P++I CL+ LE L++R C ++
Sbjct: 654 ---LNLEGCERLVELDPSIGLLRKLVYLNLKDCYNLVSIPNNIFCLSSLEYLNMRCCFKV 710

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
                 F   R L T  +      E  P +       K +          P +   L  L
Sbjct: 711 ------FTNSRHLTTPGI-----SESVPRVRSTSGVFKHVMLPHHLPFLAPPTNTYLHSL 759

Query: 589 EVLFVEDCS--KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
             L   D S  +L  +PD I  L ++  +    +  + LPS   LS ++  L+  HCK L
Sbjct: 760 YCLREVDISFCRLSQVPDTIECLHWVERLNLGGNDFATLPSLRKLSKLVY-LNLQHCKLL 818

Query: 647 ESFPR 651
           ES P+
Sbjct: 819 ESLPQ 823



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 174/424 (41%), Gaps = 77/424 (18%)

Query: 537 KLRSLVTLILLG-CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
           K+ +L  LI++     +  FP  L     L+ +   + P   LP+SF   P   V  + D
Sbjct: 556 KMSNLRLLIIVNHTATISGFPSCLSN--KLRYVEWPKYPFKYLPTSFH--PNELVELILD 611

Query: 596 CSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
            S + NL  N   L  L  + L+ +  + ++       N L  L+   C+ L     +  
Sbjct: 612 GSNIKNLWKNKKYLPNLRRLDLSDSRKLEKIMDFGEFPN-LEWLNLEGCERLVELDPSIG 670

Query: 655 LGLSAMGLLHISD-YAVREIPQEIAYLSSLEILYL-------SGNNFESLPAIIKQMSQL 706
           L L  +  L++ D Y +  IP  I  LSSLE L +       + +   + P I + + ++
Sbjct: 671 L-LRKLVYLNLKDCYNLVSIPNNIFCLSSLEYLNMRCCFKVFTNSRHLTTPGISESVPRV 729

Query: 707 R-----FIHLEDFNML-QSLPEL-PLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNML 759
           R     F H+    ML   LP L P    YLH +            +CL  +D++ C  L
Sbjct: 730 RSTSGVFKHV----MLPHHLPFLAPPTNTYLHSL------------YCLREVDISFCR-L 772

Query: 760 RSLPELPLCLQY---LNLEDCNMLRSLPELPLCLQL--LTVRNCNRLQSLPEILLCLQEL 814
             +P+   CL +   LNL   N   +LP L    +L  L +++C  L+SLP++       
Sbjct: 773 SQVPDTIECLHWVERLNLGG-NDFATLPSLRKLSKLVYLNLQHCKLLESLPQLPFPT--- 828

Query: 815 DASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIAS 874
            A   E++        + P  L      F F NC KL  +                  +S
Sbjct: 829 -AIGRERVEGG----YYRPTGL------FIF-NCPKLGERE---------------CYSS 861

Query: 875 LRLGYEMA-INEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAF 933
           +   + M  I      L    IV PGSEIP W +N+S G SI I   P     N+IGF  
Sbjct: 862 MTFSWMMQFIKANPFYLNRIHIVSPGSEIPSWINNKSVGDSIRIDQSPIKHDNNIIGFVC 921

Query: 934 CAVL 937
           CAV 
Sbjct: 922 CAVF 925



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 61/270 (22%)

Query: 492 GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLN 551
            ++  L L  S I+ +  + + L +L  LDL   ++L++I   F +  +L  L L GC  
Sbjct: 603 NELVELILDGSNIKNLWKNKKYLPNLRRLDLSDSRKLEKI-MDFGEFPNLEWLNLEGCER 661

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNI---GS 608
           L                        EL  S   L  L  L ++DC  L ++P+NI    S
Sbjct: 662 L-----------------------VELDPSIGLLRKLVYLNLKDCYNLVSIPNNIFCLSS 698

Query: 609 LEYL-----YYILAAASAIS------QLPSSVALSNMLRSLDSSHCKGLESFP-RTFLLG 656
           LEYL     + +   +  ++       +P   + S + + +   H     + P  T+L  
Sbjct: 699 LEYLNMRCCFKVFTNSRHLTTPGISESVPRVRSTSGVFKHVMLPHHLPFLAPPTNTYLHS 758

Query: 657 LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM 716
           L  +  + IS   + ++P  I  L  +E L L GN+F +LP++ +++S+L          
Sbjct: 759 LYCLREVDISFCRLSQVPDTIECLHWVERLNLGGNDFATLPSL-RKLSKL---------- 807

Query: 717 LQSLPELPLCLKYLHLIDCKMLQSLPVLPF 746
                       YL+L  CK+L+SLP LPF
Sbjct: 808 -----------VYLNLQHCKLLESLPQLPF 826


>gi|357500609|ref|XP_003620593.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
 gi|355495608|gb|AES76811.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
          Length = 1196

 Score =  236 bits (603), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 213/682 (31%), Positives = 334/682 (48%), Gaps = 101/682 (14%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS D V+ +GI GMGGIGKTTL+ A++DQ SH F GSCF+ DV        G    QK+
Sbjct: 211 LDSVDGVRAIGICGMGGIGKTTLSMALYDQISHRFSGSCFIEDVAKKFRLHDGPLDAQKE 270

Query: 61  MLSTTLS-EKLEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +L  T+  E   +   +   +  + R+RR + L++LD+V+ V QL+++    +  G GSR
Sbjct: 271 ILLQTVGIEDHHICNRHRATNLIQSRLRRERALLILDNVDRVEQLEKIGVHRECLGVGSR 330

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHS--RSVV 176
           I++ +RD+ +LE++  +   +Y+V  L++ EA   FC  AFKE       N+ S    ++
Sbjct: 331 IIIISRDEHILEEYGVD--VVYKVPLLDWNEAHMLFCRKAFKEEKIIMR-NYESLVYEIL 387

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            Y  G PL ++VLGS L  +  + W      L R+ ES  +D+ D+L++SF+ L    K 
Sbjct: 388 DYANGLPLAIKVLGSFLFGRNVTEWKSA---LTRLRESPDNDVMDVLQLSFDGLKETEKE 444

Query: 237 IFLDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQ 293
           IFLDIACFF  + + +  +IL+     +D+ L +LIDKSL++I+G  L MH +L+E+GR+
Sbjct: 445 IFLDIACFFNRKSEKYAKNILNCCRFHADIGLRVLIDKSLMNINGQNLEMHSLLEELGRK 504

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHN-----------------KGTDAIEGIFLDLS 336
           IV+  S KEP K SRLW  +++  V+  N                 +    ++ + L+  
Sbjct: 505 IVQNSSSKEPRKWSRLWSTEQLYNVMLENMVKLLFSNKKTYFQFYKQHEKHVKALVLNDE 564

Query: 337 KIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKK 396
           ++ G+N++    + MSNLRL                      +    V +   L  L  K
Sbjct: 565 EV-GLNVE--HLSKMSNLRLL---------------------IIMWGVNISGSLLSLSNK 600

Query: 397 LRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFK 456
           LRY+ W  YP + LPSNF P  LVEL L  S ++Q W  +K  +P+       L  L  +
Sbjct: 601 LRYVQWTGYPFKYLPSNFHPNELVELILHSSNIKQLWRKKKY-LPN-------LRGLDLR 652

Query: 457 GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTD 516
             + L        F     +N   C++L+                    E+  SI  L +
Sbjct: 653 YSKKLVKIVDFGEFPNLEWLNLEGCISLL--------------------ELDPSIGLLRN 692

Query: 517 LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGC-------LNLEHFPEILEKMEHLKRIY 569
           L  L+L+ CK L  I  +   L SL  L +  C        +L++ P+I E   H +   
Sbjct: 693 LVYLNLKDCKNLVSIPNNIFGLSSLKYLYMWNCHKAFTNQRDLKN-PDISESASHSR--- 748

Query: 570 SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSV 629
                 + + SS  +L  L  + +  C +L  +   I  L +L  +    +    LPS  
Sbjct: 749 ------SYVLSSLHSLYCLREVNISFC-RLSQVSYAIECLYWLEILNLGGNNFVTLPSLR 801

Query: 630 ALSNMLRSLDSSHCKGLESFPR 651
            LS ++  L+  HCK LES P+
Sbjct: 802 KLSKLVY-LNLEHCKLLESLPQ 822



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 152/362 (41%), Gaps = 76/362 (20%)

Query: 584 NLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
           NL GL++ + +   K+ +  +   +LE+L   L    ++ +L  S+ L   L  L+   C
Sbjct: 645 NLRGLDLRYSKKLVKIVDFGE-FPNLEWLN--LEGCISLLELDPSIGLLRNLVYLNLKDC 701

Query: 644 KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
           K L S P   + GLS++  L               Y+ +    + +  + ++ P I +  
Sbjct: 702 KNLVSIPNN-IFGLSSLKYL---------------YMWNCHKAFTNQRDLKN-PDISESA 744

Query: 704 SQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP--FCLESLDLTGCNMLRS 761
           S  R        +L SL  L  CL+ +++  C++ Q    +   + LE L+L G N + +
Sbjct: 745 SHSRSY------VLSSLHSL-YCLREVNISFCRLSQVSYAIECLYWLEILNLGGNNFV-T 796

Query: 762 LPELPLC--LQYLNLEDCNMLRSLPELPLCLQLLT--VRNCNRLQSLPEILLCLQELDAS 817
           LP L     L YLNLE C +L SLP+LP    +      N N+   L             
Sbjct: 797 LPSLRKLSKLVYLNLEHCKLLESLPQLPFPTNIGEDHRENNNKFHDL---------FTRK 847

Query: 818 VLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRL 877
           V + +  + P L    E  + +++ F +              +   +   +H   ASL  
Sbjct: 848 VTQLVIFNCPKL---GERERCSSMAFSW--------------MIQFIQAYQHFYPASL-- 888

Query: 878 GYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP--HSSCRNLIGFAFCA 935
                         G  IV PGSEIP W +NQS GSSI I   P  H +  N+IGF  CA
Sbjct: 889 ------------FEGIHIVTPGSEIPSWINNQSVGSSIPIDRSPIMHDNNNNIIGFVCCA 936

Query: 936 VL 937
           V 
Sbjct: 937 VF 938


>gi|357474825|ref|XP_003607698.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508753|gb|AES89895.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1165

 Score =  236 bits (602), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 205/676 (30%), Positives = 324/676 (47%), Gaps = 91/676 (13%)

Query: 8   QIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLS 67
           +IVGI GMGG+GKTTLA+ ++ + S  F+  CF+ D+    + AG +   QKQ+LS TL 
Sbjct: 222 RIVGISGMGGVGKTTLARILYRRISSRFDACCFIDDLSKICKHAGPVAA-QKQILSQTLG 280

Query: 68  EK-LEVAG-PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
           E+ L++    +  +  + R+  ++  I+LD+V++  QL++L       G GSRI++ +RD
Sbjct: 281 EEHLQICNLSDGANLIQNRLGHLRAFIILDNVDQGEQLEKLALNRKLLGVGSRIIIISRD 340

Query: 126 KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
             +L ++  +   +++V  L    + + FC  AFK ++   + +     +++Y  G PL 
Sbjct: 341 THILNRYGVD--VVFKVPLLNQTNSLQLFCQQAFKRDNILSNYDELVYEILNYANGLPLA 398

Query: 186 LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF 245
           ++ LGS L  +    W   L    R+ ++   DI+D+L++SF+ L    K IFLDIACFF
Sbjct: 399 IKALGSFLFGRDIYEWRSAL---TRLRDNPNKDIFDVLRLSFDGLENMEKEIFLDIACFF 455

Query: 246 EGEDKDFVASILD--DSESDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEK 301
            G  +  V ++L+     +D+ L +LIDKSL+SIS  + + MH +L+E+G++IV++ S K
Sbjct: 456 NGRKEALVKNVLNCCGFHADIGLRVLIDKSLISISEKSKIEMHGLLEELGKKIVQENSSK 515

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLD-PRAFTNMSNLRLFKFY 360
           +  K +RLW  +  + V+  NK  + +E I L   + +   +    A + MS+LR+    
Sbjct: 516 DSRKWTRLWLHEYFNNVMSENKEKN-VEAIVLRRGRQRETKIVIAEALSKMSHLRM---- 570

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                             L    +     LD +  +LRY+ W  YP   LPS+F+P  LV
Sbjct: 571 ------------------LILDGMDFSGSLDCISNELRYVEWREYPFMYLPSSFQPYQLV 612

Query: 421 ELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
           EL L  S ++Q WEG K  +P+       L  L  +  +SL   P          +N   
Sbjct: 613 ELILEDSSIKQLWEGTKY-LPN-------LRTLELRNSKSLIKVPDFGEIPNLERLNLKG 664

Query: 481 CVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS 540
           CV L                    E++  SI  L  L  L+L  CK L  I      L S
Sbjct: 665 CVKL--------------------EQIDPSISVLRKLVYLNLEDCKNLVTIPNDLFGLTS 704

Query: 541 LVTLILLGC-------LNLEHFPEILEKMEHLKRIYSDRTPIT----------------E 577
           L  L L GC       L+L+++ +  E   H +  +S    IT                 
Sbjct: 705 LEYLNLSGCYKAFNTSLHLKNYIDSSESASHSQSKFSIFDWITLPLQSMFPKENLDMGLA 764

Query: 578 LPSS-FENLPGLEVLFVEDCS--KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM 634
           +PS    +LP L  L   D S   L  +PD IG L +L  +    +    LPS   LS  
Sbjct: 765 IPSCLLPSLPSLSCLRKLDISYCSLSQIPDAIGCLLWLERLNLGGNNFVTLPSFRELSK- 823

Query: 635 LRSLDSSHCKGLESFP 650
           L  L+  +C  L+ FP
Sbjct: 824 LAYLNLENCMQLKYFP 839



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 163/408 (39%), Gaps = 76/408 (18%)

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLEY 611
           + P   +  + ++ I  D + I +L    + LP L  L + +   L  +PD   I +LE 
Sbjct: 601 YLPSSFQPYQLVELILED-SSIKQLWEGTKYLPNLRTLELRNSKSLIKVPDFGEIPNLER 659

Query: 612 LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD-YAV 670
           L   L     + Q+  S+++   L  L+   CK L + P   L GL+++  L++S  Y  
Sbjct: 660 LN--LKGCVKLEQIDPSISVLRKLVYLNLEDCKNLVTIPND-LFGLTSLEYLNLSGCYKA 716

Query: 671 REIPQEIA-YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNM--------LQSLP 721
                 +  Y+ S E    S + F     I   +  +     E+ +M        L SLP
Sbjct: 717 FNTSLHLKNYIDSSESASHSQSKFSIFDWITLPLQSM--FPKENLDMGLAIPSCLLPSLP 774

Query: 722 ELPLCLKYLHLIDCKMLQSLPVLPFCL---ESLDLTGCNM--LRSLPELPLCLQYLNLED 776
            L  CL+ L +  C + Q +P    CL   E L+L G N   L S  EL   L YLNLE+
Sbjct: 775 SLS-CLRKLDISYCSLSQ-IPDAIGCLLWLERLNLGGNNFVTLPSFRELSK-LAYLNLEN 831

Query: 777 CNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKH--SPDLQWAPE 834
           C  L+  PELP                            AS +E    H  S    W   
Sbjct: 832 CMQLKYFPELP---------------------------SASSIEHEHSHMFSDTSYW--- 861

Query: 835 SLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSL 894
             + A +C    NC +L        LA S + I+ +    L               R   
Sbjct: 862 --RRAGLCI--FNCPELGEMEKCSDLAFSWM-IQFLQANQLESSSVF--------FREIN 908

Query: 895 IVLPGSEIPDWFSNQS---SGSSICIQLPPHSSCRNLIGFAFCAVLDS 939
           IV+PG+E+P WF+NQ+   S S     +  H S  ++I FA C V  +
Sbjct: 909 IVIPGTEMPRWFNNQNMESSISIDISPIMHHDS--DVIAFACCVVFSA 954


>gi|15222527|ref|NP_176560.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12324940|gb|AAG52419.1|AC011622_7 putative disease resistance protein; 27010-23648 [Arabidopsis
           thaliana]
 gi|332196017|gb|AEE34138.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 966

 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 206/658 (31%), Positives = 326/658 (49%), Gaps = 71/658 (10%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +D+ D   IVGI G  GIGKTT+A+A+  + S  F+ +CF+ +++G+  +      L+  
Sbjct: 202 LDNEDEAMIVGICGPSGIGKTTIARALHSRLSSSFQLTCFMENLKGSYNSGLDEYGLKLC 261

Query: 61  MLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +    LS+ L      I H     ER+    +LI+LD V+++ QL+ L  E   FG GSR
Sbjct: 262 LQQQLLSKILNQNDLRIFHLGAIPERLCDQNVLIILDGVDDLQQLEALTNETSWFGPGSR 321

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I+VTT D+ +LE+   +    Y V+    +EA + FC  AF+++  P         V+  
Sbjct: 322 IIVTTEDQELLEQH--DINNTYHVDFPTIKEARKIFCRSAFRQSSAPYGFEKLVERVLKL 379

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
               PL L V+GSSL  K++  W  +LH   R   S    I  +L++ ++ L    + +F
Sbjct: 380 CSNLPLGLRVMGSSLRRKKEDDWESILH---RQENSLDRKIEGVLRVGYDNLHKNDQFLF 436

Query: 239 LDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS--GNFLNMHDILQEMGRQ 293
           L IA FF  +D D V ++L DS+ DV   L  L  KSL+ IS  G+ + MH +LQ++G++
Sbjct: 437 LLIAFFFNYQDNDHVKAMLGDSKLDVRYGLKTLAYKSLIQISIKGDIV-MHKLLQQVGKE 495

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMS 352
            V+++   + GKR  L D  EI  VL+++ G   + GI  D+S +   + +   AF  + 
Sbjct: 496 AVQRQ---DHGKRQILIDSDEICDVLENDSGNRNVMGISFDISTLLNDVYISAEAFKRIR 552

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NLR    Y  +         + T  +L  S+  +       P +LR LHW+ YP ++LP 
Sbjct: 553 NLRFLSIYKTR---------LDTNVRLHLSEDMV------FPPQLRLLHWEVYPGKSLPH 597

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
            F+P+ LVELNLR +++E+ WEG        IQ    L  +      +L+  P       
Sbjct: 598 TFRPEYLVELNLRDNQLEKLWEG--------IQPLTNLKKMELLRSSNLKVLP------- 642

Query: 473 PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
               N S   NL        +V  L L +S + E+P SI  L  LE L +  C++LK + 
Sbjct: 643 ----NLSDATNL--------EVLNLALCESLV-EIPPSIGNLHKLEKLIMDFCRKLKVVP 689

Query: 533 TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
           T F  L SL +L ++GC  L++ P+I   +  LK   +D T + +LP S     GL+VL 
Sbjct: 690 THF-NLASLESLGMMGCWQLKNIPDISTNITTLK--ITD-TMLEDLPQSIRLWSGLQVLD 745

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           +     + + P  I       Y+    + I ++P  +   + L+ L    C  + S P
Sbjct: 746 IYGSVNIYHAPAEI-------YLEGRGADIKKIPDCIKDLDGLKELHIYGCPKIVSLP 796



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 25/225 (11%)

Query: 552 LEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEY 611
           LE   E ++ + +LK++   R+   ++  +  +   LEVL +  C  L  +P +IG+L  
Sbjct: 614 LEKLWEGIQPLTNLKKMELLRSSNLKVLPNLSDATNLEVLNLALCESLVEIPPSIGNLHK 673

Query: 612 L-YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAV 670
           L   I+     +  +P+   L++ L SL    C  L++ P       + +  L I+D  +
Sbjct: 674 LEKLIMDFCRKLKVVPTHFNLAS-LESLGMMGCWQLKNIPDIS----TNITTLKITDTML 728

Query: 671 REIPQEIAYLSSLEIL---------------YLSGN--NFESLPAIIKQMSQLRFIHLED 713
            ++PQ I   S L++L               YL G   + + +P  IK +  L+ +H+  
Sbjct: 729 EDLPQSIRLWSGLQVLDIYGSVNIYHAPAEIYLEGRGADIKKIPDCIKDLDGLKELHIYG 788

Query: 714 FNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF--CLESLDLTGC 756
              + SLPELP  LK L +  C+ L++L   PF   +E L  + C
Sbjct: 789 CPKIVSLPELPSSLKRLIVDTCESLETLVHFPFESAIEDLYFSNC 833


>gi|13509234|emb|CAC35337.1| Nbi-C protein [Linum usitatissimum]
          Length = 1107

 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 261/911 (28%), Positives = 418/911 (45%), Gaps = 164/911 (18%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +DSS + +I+GI GMGG+GKTTLAKA++D+    FE   F+ ++R       G+  +Q +
Sbjct: 227  LDSSASEKIIGIHGMGGLGKTTLAKAVYDKVFTRFERCFFLENIRDTLSEKNGVLIMQNK 286

Query: 61   MLSTTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            ++S  L +    A    +     ++RV R KLLIVLDDV+E  Q   ++G+L+ F   SR
Sbjct: 287  IISGILRKDFNEAKYASDGIRIIRDRVCRHKLLIVLDDVDEKFQFDEVLGKLNNFSMDSR 346

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
             ++TTRD R LE  R  E K++ +  +  + +   F   AF     PED    S   V  
Sbjct: 347  FLITTRDARGLELLR--ECKMFELQEMSPDHSLTLFNKNAFGAEFPPEDYAILSNEFVQA 404

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL ++V+GS L    K  W + L +L +I  +++ +    LKIS+N+LT   K IF
Sbjct: 405  AAGLPLYIKVIGSLLFRMDKIFWEEKLEELKKISPTKVQER---LKISYNELTHNEKQIF 461

Query: 239  LDIACFFEGEDKDFVASILDDSESD-----VLDILIDKSLVS-----ISGNFLN---MHD 285
            LDIAC+F G  K  +  IL  S+ D      +  L  +SL+      + G+ +N   MH+
Sbjct: 462  LDIACYFIGLSK--IEPILMWSDCDFYPESTIRYLTQRSLIKLQRSEVKGDDINTFQMHN 519

Query: 286  ILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDP 345
             ++++GR IVR+E+ + P KRSR+W  K+   +LKH KGTD +E + +D+   +G +L  
Sbjct: 520  HVRDLGRAIVREENNQNPYKRSRIWSNKDAIDMLKHKKGTDCVEVLTVDM---EGEDL-- 574

Query: 346  RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGL-DYLPKKLRYLHWDT 404
               TN               E+EKL  +     LS S  +L     D LP  LR+L    
Sbjct: 575  -ILTNK--------------ELEKLTRL---RYLSVSNARLAGDFKDVLP-NLRWLR--L 613

Query: 405  YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSF 464
            +   ++P+      LV+L L    V   W+G      + ++    L A++ + C  L+  
Sbjct: 614  HSCDSVPTGLYLNKLVDLELVDCSVRDGWKG-----WNELKVAHKLKAVTLERCFHLKKV 668

Query: 465  P-----SNLHFVCPVTINFSYCVNL-------------------IEFPQISGKVTRL--- 497
            P      +L F     +NF  C N+                    +  +I G++ RL   
Sbjct: 669  PDFSDCGDLEF-----LNFDGCGNMHGEVDIGNFKSLRFLMISNTKITKIKGEIGRLVNL 723

Query: 498  -YL--GQSAIEEVPSSIECLTDLE--------------------VLDLRGCKRLKRISTS 534
             YL    S+++EVP+ I  L+ LE                     L L  C+ L+ +S +
Sbjct: 724  KYLIASNSSLKEVPAGISKLSSLEWLYLTLTDPYKSDFTETLPASLTLLSCENLQSLS-N 782

Query: 535  FCKLRSLVTLILLGCLNLEHFPEI--LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF 592
               L +L TLIL          EI  L K++ L+ +  +R P        ENL  L+ L 
Sbjct: 783  LSNLINLSTLILCDV----GIGEIIGLGKLKMLEYLIIERAPRIVHLDGLENLVLLQQLR 838

Query: 593  VEDCSKLDNLPDNIG--SLEYLYY----ILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
            VE C  L  LP  +    LE L+     ++   + + Q   S++    L+ +  S   GL
Sbjct: 839  VEGCPVLGKLPSLVALIRLEKLWIEDCPLVTEINGVGQRWESLS---DLKVVGCSALIGL 895

Query: 647  ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
            E+      L      L+ +       +P  ++  + L  L L              MSQ 
Sbjct: 896  EALHSMVKL----RSLILMGAKITETVPSSLSMFTQLTTLGLC------------FMSQE 939

Query: 707  RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP 766
            +F +L +   L+ L  +  CL+ + +     L+S       LE L L+GC  +R +P+L 
Sbjct: 940  QFPNLSNLKNLRELG-MDYCLELIEVPGLDTLES-------LEYLSLSGCQSIRKVPDLS 991

Query: 767  LC--LQYLNLEDCNMLRSL-----------PELPLCLQLLTVRNCNRLQSLPEILL--CL 811
                L+ L++E C  L+ +            ++  C  +  + N + L++L E+LL  C+
Sbjct: 992  GMKKLKTLDVEGCIQLKEVEGLERLESLEELKMSGCKSIEELPNLSGLKNLRELLLKGCI 1051

Query: 812  QELDASVLEKL 822
            Q  + + LE L
Sbjct: 1052 QLKEVNGLEGL 1062


>gi|325683726|gb|ADZ44604.1| TIR-NBS-LRR type protein [Fragaria x ananassa]
          Length = 630

 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 157/427 (36%), Positives = 234/427 (54%), Gaps = 36/427 (8%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
           KTT+AKA+++   H F+GSCF+ +VR NS+ A GL  LQK +L   L E+ EV   ++  
Sbjct: 222 KTTIAKAVYNSIVHRFDGSCFLENVRENSKGARGLVELQKILLREILKER-EVEVTSVAR 280

Query: 79  --HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
             +  KER++  ++L+VLDDV+++ QL  L  +   FG GSRI++TTRD+++L       
Sbjct: 281 GINMIKERLQYKRVLLVLDDVSDMNQLNNLARQCSWFGMGSRIIITTRDRKLLRCHGVRP 340

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
             IY V  L+  +A E     AFK     +     ++  V YT+G PL L VLGSSL   
Sbjct: 341 DLIYEVQELDEHDALELLSVIAFKRIRPLDSYAELTKRAVRYTQGLPLALTVLGSSLRGG 400

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
               W   L        SE  +I D+LKISF+ L  R K  FLDIACFF+GE ++ V  I
Sbjct: 401 SVELWEAALDG------SESREIKDVLKISFDGLGHRAKEAFLDIACFFKGEHREHVIKI 454

Query: 257 LD--DSESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           L    SE   +++LI+K+L+S+     + MHD+++EMGR IV ++S   PG RSRLW  +
Sbjct: 455 LKACGSEEHFINVLIEKALISVRYMGKIWMHDLIEEMGRDIVHEQSPDNPGNRSRLWFHE 514

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGI-NLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
           ++ RVL  N GT+ + GI ++L +   +  L   +F++M NL+L      +         
Sbjct: 515 DVYRVLVDNIGTNNVRGIKVELPEDSNVLCLCATSFSSMKNLKLIICRAGR--------- 565

Query: 373 MSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQP 432
                   YS V     +D LP  LR + W   PL+ L S+  P+ L  +++  S++   
Sbjct: 566 --------YSGV-----VDGLPNSLRVIDWADCPLQVLSSHTIPRELSVIHMPRSRITVL 612

Query: 433 WEGEKAC 439
            +G K C
Sbjct: 613 GDGYKVC 619


>gi|13509238|emb|CAC35339.1| Nho-C protein [Linum usitatissimum]
          Length = 1120

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 252/868 (29%), Positives = 408/868 (47%), Gaps = 135/868 (15%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +DSS + +I+GI GMGG+GKTTLAKA++D+ S +FE   F+ ++R       G+  LQ +
Sbjct: 227  LDSSTSEKIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENIRDTLSEKNGVSILQNK 286

Query: 61   MLSTTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            ++S  L +    A    +     ++RV R KLLIVLDDV+E  Q   ++G+L+ F   SR
Sbjct: 287  IISGILRKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQFDEVLGKLNNFSMDSR 346

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
             ++TTRD R LE  R  E K++ +  +  + +   F   AF     PED    S   V  
Sbjct: 347  FLITTRDARGLELLR--ECKMFELQEMSPDHSLTLFNKNAFGAEFPPEDYAILSNEFVQA 404

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL ++V+GS L    K  W + L +  +I  +++    + LKIS+ +LT   K IF
Sbjct: 405  AAGLPLYIKVIGSLLFRMDKIFWEEKLEEFKKISPTKVQ---ERLKISYTELTYNEKQIF 461

Query: 239  LDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVS-----ISGNFLN---MHDIL 287
            LDIAC+F G  K     +  D +      +  L  +SL+      + G+ +N   MH+ +
Sbjct: 462  LDIACYFIGSYKIEPMRMWSDCDFYPESTIRYLTQRSLIKLQRSEVKGDDINTFQMHNHV 521

Query: 288  QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA 347
            +++GR IVR+E+ + P KRSR+W  K+   +LKH KGTD +E + +D+   +G +L    
Sbjct: 522  RDLGRAIVREENNQNPYKRSRIWSNKDAIDMLKHKKGTDCVEVLTVDM---EGEDL---I 575

Query: 348  FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGL-DYLPKKLRYLHWDTYP 406
             TN               E+EKL  +     LS S  +L     D LP  LR+L    + 
Sbjct: 576  LTNK--------------ELEKLTRL---RYLSVSNARLAGDFKDVLP-NLRWLR--LHS 615

Query: 407  LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP- 465
              ++P+      LV+L L    V   W+G      + ++    L A++ + C  L+  P 
Sbjct: 616  CDSVPTGLYLNKLVDLELVDCSVRDGWKG-----WNELKVAHKLKAVTLERCFHLKKVPD 670

Query: 466  ----SNLHFVCPVTINFSYCVNL-------------------IEFPQISGKVTRL----Y 498
                 +L F     +NF  C N+                    +  +I G++ RL    Y
Sbjct: 671  FSDCGDLEF-----LNFDGCRNMHGEVDIGNFKSLRFLMISNTKITKIKGEIGRLLNLKY 725

Query: 499  L--GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
            L    S+++EVP+ I  L+ L+ L L      K   T    L + +T++L+     +  P
Sbjct: 726  LIASNSSLKEVPAGISKLSSLKWLSLTLTDPYKLDFTEM--LPASLTILLISNDTQKSCP 783

Query: 557  EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL-YYI 615
            +    +E+L+R          LP +  NL  L VLF+ D    + L   +G L+ L Y +
Sbjct: 784  DT--SLENLQR----------LP-NLSNLINLSVLFLMDVGIGEIL--GLGELKMLEYLV 828

Query: 616  LAAASAISQLPSSVALSN--MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD----YA 669
            +  AS I  L     L N  +L++L    C+ L   P   L+ L+ + LL I D      
Sbjct: 829  IERASRIVHLD---GLENLVLLQTLKVEGCRILRKLPS--LIALTRLQLLWIKDCPLVTE 883

Query: 670  VREIPQEIAYLSSLEILYLSG-NNFESLPAIIK------QMSQLRFIHLEDFNMLQSLPE 722
            +  + Q    LS L ++  S     ++L +++K      +  +L    L   +++  L +
Sbjct: 884  IHGVGQHWESLSDLRVVGCSALTGLDALHSMVKLEYLVLEGPELTERVLSSLSIITKLVK 943

Query: 723  LPLC----LKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCN 778
            L L      ++  L + K L  L  L FC E +++ G + L S       ++YL L  C 
Sbjct: 944  LGLWHMSRRQFPDLSNLKNLSELS-LSFCEELIEVPGLDTLES-------MEYLYLNGCQ 995

Query: 779  MLRSLPELPLC--LQLLTVRNCNRLQSL 804
             +R +P+L     L+ L V  C +L+ +
Sbjct: 996  SIRKVPDLSGLKKLKTLDVEGCIQLKEV 1023


>gi|227438293|gb|ACP30636.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1770

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 193/657 (29%), Positives = 315/657 (47%), Gaps = 65/657 (9%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           D      IVGI G  GIGKTT+A+A+  + S  F+ +CF+ ++RG+  + G  E+  K  
Sbjct: 204 DEEGGAMIVGICGPSGIGKTTIARALHSRLSSGFQLTCFMENLRGSCNSGGLDEYGLKLR 263

Query: 62  LSTTLSEKL-EVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           L   L  K+    G  I H     ER+   K+LI+LDDV+++ QL+ L  E + FG GSR
Sbjct: 264 LQELLLSKIFNQNGMRIYHLGAIPERLCDQKVLIILDDVDDLQQLEALADETNWFGDGSR 323

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I+VTT D+ +LE   G    IY V+    +EA + FC +AF+++  P      +      
Sbjct: 324 IIVTTEDQELLE-LHG-ITNIYHVDLPTEKEARKIFCRYAFRQSLPPYGYENLAERATEL 381

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
               P  L V+GS L  K++  W  +   L R+  S I  I  +L++ ++ L  + + +F
Sbjct: 382 CGNLPFGLRVMGSMLRGKKEDDWESI---LCRLENSNIPKIEAVLRVGYDSLHEKDQILF 438

Query: 239 LDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNF-LNMHDILQEMGRQI 294
             IA FF  E+   V ++L DS  DV   L  L  KSL+ IS    + MH +LQ++GRQ 
Sbjct: 439 HLIAVFFNYENDGHVKTMLADSGLDVRLGLKTLAYKSLIKISSEGEVVMHKLLQQVGRQA 498

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIK-GINLDPRAFTNMSN 353
           ++++   EP KR  L D  +I  VL+++ G+ ++ GI  D+S IK  +++  R F +M  
Sbjct: 499 IQRQ---EPWKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDDMDISARVFKSMRT 555

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           LR  + Y  +                +  +V LP  +++ P +L+ LHW+ YP + LP  
Sbjct: 556 LRFLRVYNTRCD--------------TNVRVHLPEDMEF-PPRLKLLHWEVYPRKCLPRT 600

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           F P++LVEL+L  +++EQ WEG         Q    L  +    C  L+  P   +    
Sbjct: 601 FCPEHLVELHLTDTQLEQLWEG--------TQPLTSLKKMVLVSCLCLKELPDLANATNL 652

Query: 474 VTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
             ++   C +L+                    E+ SS+  L  L+ LD+  CK+L+ + T
Sbjct: 653 EILDVCGCQSLV--------------------EIHSSVGNLHRLQSLDMIFCKKLQVVPT 692

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
            F  L SL +L+++G   +   P+I   +  L       T + E   S      L+ L +
Sbjct: 693 LF-NLTSLESLVIMGSYQMRELPDISTTIRELS---IPETMLEEFLESTRLWSHLQCLEI 748

Query: 594 EDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
             C+       +      +  ++ + + I ++P  +   + L+ L    C  L S P
Sbjct: 749 FGCAITHQFMAHPSQRNLM--VMRSVTGIERIPDCIKCLHGLKELSIYGCPKLASLP 803



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 188/601 (31%), Positives = 292/601 (48%), Gaps = 78/601 (12%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +D       VGI G  GIGKTT+A+A+  + S  F+ SCF+ ++RG+   +G  E+  K 
Sbjct: 1123 LDDEGGAMFVGICGPAGIGKTTIARALHSRLSSGFQHSCFMENLRGSCCNSGLDEYGLKL 1182

Query: 61   MLSTTLSEKL-EVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
             L   L  K+    G  I H     ER+   K+LI+LDDV+++ QL+ L  E   FG GS
Sbjct: 1183 RLQELLLSKIFNQNGMRIYHLGAIPERLCDQKVLIILDDVDDLKQLEALADETKWFGDGS 1242

Query: 118  RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
            R+++                       LE  +A + FC  AF++   P         VV+
Sbjct: 1243 RVILM----------------------LEL-DARQIFCRIAFRQLSAPHGFEKLVERVVN 1279

Query: 178  YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
                 PL L V+GSSL  K+   W  +L    R+  S   DI  +L++ ++ L    + +
Sbjct: 1280 LCSNLPLGLRVMGSSLRRKKVDDWEAILQ---RLENSLNRDIEGVLRVGYDNLHKDDQFL 1336

Query: 238  FLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISG-NFLNMHDILQEMGRQ 293
            F  IACFF  +D D V ++L DS  DV   L  L  KSL+ IS    + MH +LQ++GR+
Sbjct: 1337 FQLIACFFNYQDDDRVKAMLVDSNLDVRLGLKTLSYKSLIQISAEGTIVMHKLLQQVGRE 1396

Query: 294  IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMS 352
             V  +   EP KR  L D  +I  VL+++  + ++ GI  D S I  G+ +  +AF  M 
Sbjct: 1397 AVHLQ---EPRKRQILIDAHQICDVLENDYDSASVMGISFDTSTIPNGVCISAQAFRTMR 1453

Query: 353  NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            +LR         YE  + P++         ++ LP  + + P  LR LHW+ YP + LP 
Sbjct: 1454 DLRFL-----SIYETRRDPNV---------RMHLPEDMSF-PPLLRLLHWEVYPGKCLPH 1498

Query: 413  NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
              +P++LVEL    SK+EQ W+G        IQ    L  +   G  SL+  P   +   
Sbjct: 1499 TLRPEHLVELCFVNSKLEQLWQG--------IQPLTNLKKMDLSGSLSLKEVPDLSNATH 1550

Query: 473  PVTINFSYCVNLIEFPQISGKVTRLYLGQ----SAIEEVPSSIECLTDLEVLDLRGCKRL 528
               +N + C +L+E P   G + +L   +     +++  PS +  L  LE L++ GC +L
Sbjct: 1551 LKRLNLTGCWSLVEIPSSIGDLHKLEELEINLCISLQVFPSHLN-LASLETLEMVGCWQL 1609

Query: 529  KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT-----PITELPSSFE 583
            ++I   +   +SLV    +G   LE FPE L      KR+ + ++     P  E+P+ F+
Sbjct: 1610 RKI--PYVSTKSLV----IGDTMLEEFPESL--CLEAKRVITQQSFRAYFPGKEMPAEFD 1661

Query: 584  N 584
            +
Sbjct: 1662 D 1662



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 135/397 (34%), Gaps = 119/397 (29%)

Query: 563 EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAAS 620
           EHL  ++   T + +L    + L  L+ + +  C  L  LPD  N  +LE L   +    
Sbjct: 604 EHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEILD--VCGCQ 661

Query: 621 AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
           ++ ++ SSV   + L+SLD   CK L+  P  F L  S   L+ +  Y +RE+P     +
Sbjct: 662 SLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNL-TSLESLVIMGSYQMRELPDISTTI 720

Query: 681 SSLEILYLSGNNFESLPAIIKQMSQLRFI----------HLEDFNML-----QSLPELPL 725
             L I       F     +   +  L             H    N++       +  +P 
Sbjct: 721 RELSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPD 780

Query: 726 CLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPE 785
           C+K LH                L+ L + GC  L SLPELP  L  L +  C  L +L  
Sbjct: 781 CIKCLH---------------GLKELSIYGCPKLASLPELPRSLTTLTVYKCPSLETLEP 825

Query: 786 LPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEF 845
            P                             S +E LS                     F
Sbjct: 826 FPF---------------------------GSRIEDLS---------------------F 837

Query: 846 TNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDW 905
            +C +L  KA   I   S                             S + LPG  +P  
Sbjct: 838 LDCFRLGRKARRLITQQS-----------------------------SRVCLPGRNVPAE 868

Query: 906 FSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKV 942
           F +++ G+ + I       C N   F  CAV+  K+V
Sbjct: 869 FHHRAIGNFVAI-------CSNAYRFKICAVISPKQV 898


>gi|297848176|ref|XP_002891969.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337811|gb|EFH68228.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 186/625 (29%), Positives = 291/625 (46%), Gaps = 89/625 (14%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+IVG+ G  GIGK+T+A+A+    S+ F+ +CF+ ++  N +   G   L+  +    L
Sbjct: 205 VKIVGLAGPAGIGKSTIARALCSGLSNRFQRTCFMDNLMENCKIGLGEYSLKLHLQEQLL 264

Query: 67  SEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
           S+ L + G  I H    +ER+   ++LI+LDDV  + QL+ L   +  FG GSR++VTT 
Sbjct: 265 SKVLNLNGIRISHLRVIQERLHDKRILIILDDVENLVQLEAL-ANISWFGPGSRVIVTTE 323

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           +K +L++    +  IY+V      EA   FC  AF++   P+     +  VV      PL
Sbjct: 324 NKEILQQHGIND--IYQVGFPSESEALTIFCLSAFRQTSPPDGFMKLTCEVVKICGNLPL 381

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L VLGSSL  K ++ W   L  L +IC      I  +LK+ +  L  + + IFL IA F
Sbjct: 382 GLHVLGSSLRGKSQADWIDELPRL-KICLD--GRIESVLKVGYESLHEKDQVIFLLIAIF 438

Query: 245 FEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
                 D V S+L  +  DV   L  L  K L+    + + MH +LQ M  Q++   S++
Sbjct: 439 LNYAHVDHVTSVLAKTNLDVSLGLKNLAKKYLIQRESSIVVMHHLLQVMATQVI---SKQ 495

Query: 302 EPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYV 361
           E  KR  L D  EI  VL+  +G  +I G+  D+++I  + +   AF  M NL   K Y 
Sbjct: 496 ERSKRQILVDANEICFVLEMAEGNGSIIGVSFDVAEINELRISATAFAKMCNLAFLKVYN 555

Query: 362 PKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVE 421
            K  E               +++ +PN +++ P++L+ LHW+ YP ++LP  F  +NLV+
Sbjct: 556 GKHTE--------------KTQLHIPNEMEF-PRRLKLLHWEAYPKKSLPIGFCLENLVK 600

Query: 422 LNLRCSKVEQPWEGEK----------------------------------AC-----VPS 442
            N+  SK+E+ WEG +                                   C     +PS
Sbjct: 601 FNMAFSKLEKLWEGTQPLANLKEMNLAVSTHLKELPDLSKATNLESLNLNGCTALVEIPS 660

Query: 443 SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQS 502
           SI N   LS L    C+SL   P+ ++      I     + L  FP     V  + +  +
Sbjct: 661 SIVNLHKLSELGMSTCESLEVIPTLINLASLERIWMFQSLQLKRFPDSPTNVKEIEIYDT 720

Query: 503 AIEEVPSSIECLTDLEVLDLRGCKRLK---------------------RISTSFCKLRSL 541
            +EE+P+S+   T L  LD+   +  K                     RI+     L +L
Sbjct: 721 GVEELPASLRHCTRLTTLDICSNRNFKTFSTHLPTCISWISLSNSGIERITACIKGLHNL 780

Query: 542 VTLILLGCLNLEHFPEILEKMEHLK 566
             LIL GC  L+  PE+ + +E L+
Sbjct: 781 QFLILTGCKKLKSLPELPDSLELLR 805



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 183/434 (42%), Gaps = 88/434 (20%)

Query: 520 LDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE----HFPEILEKMEHLKRIYSDRTPI 575
            D+     L+  +T+F K+ +L  L +    + E    H P  +E    LK ++ +  P 
Sbjct: 527 FDVAEINELRISATAFAKMCNLAFLKVYNGKHTEKTQLHIPNEMEFPRRLKLLHWEAYPK 586

Query: 576 TELPSSF--ENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALS 632
             LP  F  ENL    + F    SKL+ L +    L  L  + LA ++ + +LP     +
Sbjct: 587 KSLPIGFCLENLVKFNMAF----SKLEKLWEGTQPLANLKEMNLAVSTHLKELPDLSKAT 642

Query: 633 NMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNN 692
           N L SL+ + C  L   P + ++ L  +  L +S     E+   +  L+SLE +++    
Sbjct: 643 N-LESLNLNGCTALVEIPSS-IVNLHKLSELGMSTCESLEVIPTLINLASLERIWM---- 696

Query: 693 FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC--LES 750
           F+SL                    L+  P+ P  +K + + D  + +    L  C  L +
Sbjct: 697 FQSL-------------------QLKRFPDSPTNVKEIEIYDTGVEELPASLRHCTRLTT 737

Query: 751 LDLTGCNMLRSL-PELPLCLQYLNLEDCNMLRSLPELPLC------LQLLTVRNCNRLQS 803
           LD+      ++    LP C+ +++L +  + R    +  C      LQ L +  C +L+S
Sbjct: 738 LDICSNRNFKTFSTHLPTCISWISLSNSGIER----ITACIKGLHNLQFLILTGCKKLKS 793

Query: 804 LPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADS 863
           LPE+   L+ L A   E L + S      P  LK+      FTNC+KL G+A   I+  S
Sbjct: 794 LPELPDSLELLRAEDCESLERVS-----GP--LKTPTATLRFTNCIKLGGQARRAIIKGS 846

Query: 864 LLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHS 923
            +R           G+ +               LPG EIP  F ++  G+S+ I   PHS
Sbjct: 847 FVR-----------GWAL---------------LPGGEIPAKFDHRVRGNSLTI---PHS 877

Query: 924 SCRNLIGFAFCAVL 937
           +      F  C V+
Sbjct: 878 TSNR---FKVCVVI 888


>gi|51477385|gb|AAU04758.1| MRGH10 [Cucumis melo]
          Length = 944

 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 219/741 (29%), Positives = 350/741 (47%), Gaps = 112/741 (15%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGS--CFVSDVRGNSETAGGLEHLQKQ 60
            S+ ++++GI GM GIGKTTLA+ IF+ +   F     CF+  V G S  +   + L + 
Sbjct: 258 GSNDIRVIGIVGMRGIGKTTLAEHIFNHYFKYFSVGKYCFLHIV-GRSIVSLQQQLLDQL 316

Query: 61  MLSTTLSEKLEVAGPNIPHFTKERVRRMK-LLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
             S   S +L      +  F  E +  +K +LIV D ++E+ QLK L G  D FG+GSRI
Sbjct: 317 GCSNFFSYQLWDEDLLVI-FMMECLSSLKNVLIVFDGISEISQLKMLAGSPDWFGEGSRI 375

Query: 120 VVTTRDKRVLEKFRGEEK-KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           ++TT +K +      ++K + Y V  L  E AF  FC  AF ++   ED+      ++  
Sbjct: 376 IITTTNKEIFRHPNFKDKVQEYNVELLSHEAAFSLFCKLAFGDHPPSEDMKDLCNEIIEK 435

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
               PL LE +  SL       W   L + +++    I    DILK S+  L    + IF
Sbjct: 436 VGRLPLALEKIAFSLYGHDMDIWEDTLKNFHKVVYDNIFS--DILKSSYEGLEAESQQIF 493

Query: 239 LDIACFFEGEDKDFVASILD----DSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           LD+ACF  GE  D V  IL      S    L +L+D+ L+ I    + MH ++  MG++I
Sbjct: 494 LDLACFLNGEKVDRVIEILQGFGYSSPQTNLQMLVDRCLIDILDGHIQMHILILCMGQEI 553

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VR++      +++R+W   +  R+   N     I GI +DL + + + L  + F +MS L
Sbjct: 554 VRRKMGN--CQQTRIWLRDDARRIFHENNELKYICGIVMDLEEEEELILKAKVFADMSEL 611

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           ++ +                       + VQL   +++L  KL  L+W  YP + LPS F
Sbjct: 612 KILRI----------------------NNVQLSEDIEFLSNKLTLLNWPGYPSKYLPSTF 649

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFK-GCQSLRSFPSNLHFVCP 473
           +P +L+EL+L  S VE+ W G +           +   LSF   C+SL+           
Sbjct: 650 QPPSLLELHLPGSNVERLWNGTQ-----------FQKLLSFVITCESLK----------- 687

Query: 474 VTINFSYCVNLIEFPQIS---GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
            T+  S C  L  FP+     G +T L++  ++I E+  SI+ L  L +L+L  C RL  
Sbjct: 688 -TLVLSNC-GLEFFPEFGFPMGYLTELHIDGTSINELSPSIKNLLGLVLLNLGNCIRLSS 745

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
           + T    L SL TLIL GC NL   P  LE ++ L+ +    T I+        +P +E 
Sbjct: 746 LPTEIGSLSSLKTLILNGCKNLHKLPPSLEYVKPLEELDIGGTSIS-------TIPFVEN 798

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           L + +C +L ++         +++ LA+      LP+    S  L+ L+ S C  ++   
Sbjct: 799 LRILNCERLKSI---------IWHSLAS------LPTEYFSS--LKDLNLSDCNLVD--- 838

Query: 651 RTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFE-SLPAIIKQMSQLRFI 709
                                +IP ++   SSLEIL L  N+FE ++   +  +  L++ 
Sbjct: 839 --------------------EDIPSDLELFSSLEILDLGSNHFEKTVRKALNNLLPLKYC 878

Query: 710 HLEDFNMLQSLPELPLCLKYL 730
            L D + L+ LP+LP  ++Y+
Sbjct: 879 TLNDCHKLKQLPKLPQSIRYV 899



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 146/323 (45%), Gaps = 74/323 (22%)

Query: 485 IEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI--STSFCKLRSLV 542
           IEF  +S K+T L       + +PS+ +  + LE L L G   ++R+   T F KL S V
Sbjct: 625 IEF--LSNKLTLLNWPGYPSKYLPSTFQPPSLLE-LHLPG-SNVERLWNGTQFQKLLSFV 680

Query: 543 -------TLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
                  TL+L  C  LE FPE    M +L  ++ D T I EL  S +NL GL +L + +
Sbjct: 681 ITCESLKTLVLSNC-GLEFFPEFGFPMGYLTELHIDGTSINELSPSIKNLLGLVLLNLGN 739

Query: 596 CSKLDNLPDNIGSLEYL-YYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
           C +L +LP  IGSL  L   IL     + +LP S+     L  LD               
Sbjct: 740 CIRLSSLPTEIGSLSSLKTLILNGCKNLHKLPPSLEYVKPLEELD--------------- 784

Query: 655 LGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDF 714
                     I   ++  IP    ++ +L IL     N E L +II             +
Sbjct: 785 ----------IGGTSISTIP----FVENLRIL-----NCERLKSII-------------W 812

Query: 715 NMLQSLP-ELPLCLKYLHLIDCKML-QSLPV---LPFCLESLDLTGCNML-----RSLPE 764
           + L SLP E    LK L+L DC ++ + +P    L   LE LDL G N       ++L  
Sbjct: 813 HSLASLPTEYFSSLKDLNLSDCNLVDEDIPSDLELFSSLEILDL-GSNHFEKTVRKALNN 871

Query: 765 LPLCLQYLNLEDCNMLRSLPELP 787
           L L L+Y  L DC+ L+ LP+LP
Sbjct: 872 L-LPLKYCTLNDCHKLKQLPKLP 893


>gi|356541551|ref|XP_003539238.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1028

 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 202/602 (33%), Positives = 297/602 (49%), Gaps = 99/602 (16%)

Query: 6   TVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTT 65
           TV +VGI G+ GIGKTTLA+A+++  S +FEGSCF++DVRG+S    GL +LQ+ +LS  
Sbjct: 213 TVIMVGICGVSGIGKTTLAQALYNHISPQFEGSCFLNDVRGSSAKY-GLAYLQEGILSDI 271

Query: 66  LSEKLEVAGPN--IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
             E ++V   +  IP   + ++   ++L++LD+V+++ QL+ L GE + FG GSRI++T+
Sbjct: 272 AGENIKVDNEHKGIPILIR-KLHGKRVLLILDNVDKLEQLEYLAGECNWFGLGSRIIITS 330

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           R K VL     E   IY V  L + EA +   +        P+  N      V  + G P
Sbjct: 331 RCKDVLAAHGVE--NIYDVPTLGYYEAVQ-LLSSKVTTGPVPDYYNAIWERAVHCSHGLP 387

Query: 184 LVLE-----------VLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTP 232
           LVL+           V+GS L        G  L    R+C+ EI     ILK+S++ L  
Sbjct: 388 LVLKDIGSDLSEKMNVIGSDLSWPSIDELGIALERYERVCDGEIQ---SILKVSYDSLNE 444

Query: 233 RVKSIFLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSI-SGNFLNMHDILQ 288
             K IFLDIACFF GE   +V  IL     +    ++ LID+SL+SI S   L MHD ++
Sbjct: 445 CEKKIFLDIACFFIGEPVSYVEEILSAIGFNPQHSINRLIDRSLLSIDSSGRLMMHDHIK 504

Query: 289 EMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHN-----------KGTDAIEGIFL-DLS 336
           +M  +IV+QE+   P KRSRLW P+++ +VL  N           KG+D IE + L DL 
Sbjct: 505 DMAMKIVQQEAPLHPEKRSRLWCPQDVLQVLNENELVVFNLFLLSKGSDKIEVMMLVDLP 564

Query: 337 KIKGI-NLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPK 395
           +   +  L  +AF NM +LR+                    +   YS +       +L  
Sbjct: 565 RGNDVLKLSDKAFKNMKSLRMLII-----------------KDAIYSGIP-----QHLSN 602

Query: 396 KLRYLHWDTYPLRTLPSNF--KPKNLVEL----NLRC-SKV---------EQPWEGEKAC 439
            LR L W  YP   LP +F   P + + L    N+ C +K+         E P   + + 
Sbjct: 603 SLRVLIWSGYPSGCLPPDFVKVPSDCLILNNFKNMECLTKMDFTDCEFLSEVP---DISG 659

Query: 440 VP-----------------SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCV 482
           +P                  S+     L  L+  GC SL+  PS         ++FS C+
Sbjct: 660 IPDLRILYLDNCINLIKIHDSVGFLGNLEELTTIGCTSLKIIPSAFKLASLRELSFSECL 719

Query: 483 NLIEFPQISGKVTRLY---LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLR 539
            L+ FP+I  ++  L    L Q+AIEE+P SI  L  LE L+L  C RL ++ +S   L 
Sbjct: 720 RLVRFPEILCEIENLKYLNLWQTAIEELPFSIGNLRGLESLNLMECARLDKLPSSIFALP 779

Query: 540 SL 541
            L
Sbjct: 780 RL 781


>gi|255563220|ref|XP_002522613.1| hypothetical protein RCOM_0884420 [Ricinus communis]
 gi|223538089|gb|EEF39700.1| hypothetical protein RCOM_0884420 [Ricinus communis]
          Length = 708

 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/354 (42%), Positives = 204/354 (57%), Gaps = 16/354 (4%)

Query: 82  KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIYR 141
           K+ + R K+LIVLDDVN+  Q+  L+   D +G  S I++T+RD+++L+    +   IY 
Sbjct: 241 KKWIMRKKVLIVLDDVNDSEQIDFLVRPRDIYGPESTIIMTSRDQQILKYGNAD---IYE 297

Query: 142 VNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHW 201
           V  L  +EAF+ F   AFK N   E L   +R  V Y +GNPL L+VLGS+L  K     
Sbjct: 298 VKELNSDEAFKLFILHAFKGNPPAEALKEVARMAVEYGRGNPLALKVLGSTLYDKSTEEC 357

Query: 202 GKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDD-S 260
              L  L  I + +I +I   L+ISF+ L    K IFLDIACFF+ EDK+ V SIL    
Sbjct: 358 RDHLKKLEDISDKKIQNI---LRISFDDLDDDEKEIFLDIACFFKWEDKNEVESILSSFG 414

Query: 261 ESDVLDI--LIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRV 318
            S ++ I  L DKSL+++S   + MHD+LQ+MGR IVRQE  K P KRSRLW  ++I  V
Sbjct: 415 RSAIIGIRVLQDKSLITVSNKKIEMHDLLQQMGRDIVRQECIKHPEKRSRLWISQDIYHV 474

Query: 319 LKHNKGTD-AIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEE 377
           L  + G   ++E I LD+S  + + L    F  MS L+  KFY P  ++ E       + 
Sbjct: 475 LTKDLGRSISVESISLDMSNSRDMELSSTTFERMSRLKFLKFYSPYSHQQE------LDA 528

Query: 378 QLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
                 + L     +LP +LRYL+W  YPL  LP NF P NLV+L+L CS V+Q
Sbjct: 529 ACKICNISLSKEFSFLPDELRYLYWYKYPLTCLPLNFCPNNLVQLHLICSHVQQ 582


>gi|297791225|ref|XP_002863497.1| hypothetical protein ARALYDRAFT_916959 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309332|gb|EFH39756.1| hypothetical protein ARALYDRAFT_916959 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 846

 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 191/696 (27%), Positives = 318/696 (45%), Gaps = 142/696 (20%)

Query: 13  WGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEV 72
           +GM GIGKTTL K ++  +  +F     +  +R  S+      HL+   L   L +    
Sbjct: 216 FGMPGIGKTTLLKELYKTWQGKFTRHALIDQIRVKSK------HLELDRLPQMLLD---- 265

Query: 73  AGPNIPHFTKERVRRMKLLIVLDDVN---EVGQLKRLIGELDQFGQGSRIVVTTRDKRVL 129
                P+    ++   K+L+VLDDV+   ++  L+ ++  + +  +GSR+V+ T D  + 
Sbjct: 266 -----PY---SQLHERKVLVVLDDVSKREQIDALREILDWIKEGKEGSRVVIATSDVSLT 317

Query: 130 EKFRGEEKKIYRVNGLEFEEAFEHFCNFAF---KENHCPEDLNWHSRSVVSYTKGNPLVL 186
               G     Y V  L   ++ + F   AF   + N   +D    S   V Y +G+PL L
Sbjct: 318 N---GLVDDTYMVQNLNHRDSLQLFHYHAFIDDQANPQKKDFMKLSEGFVHYARGHPLSL 374

Query: 187 EVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFE 246
           ++LG  L  K   HW      + ++ +S   +I  + ++S+++LT   K  FLDIACF  
Sbjct: 375 KILGGELNKKNMDHWNS---KMKKLAQSPCPNIVSVFQVSYDELTSEQKDAFLDIACF-R 430

Query: 247 GEDKDFVASILDDSE------SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESE 300
            +DK++V S+L  S+         +  L DK L++     + MHD+L +  R++  + S 
Sbjct: 431 SQDKNYVESLLASSDLGSAEAMSAVKSLTDKFLINTCDGRVEMHDLLYKFSRELDLKASN 490

Query: 301 KEPGKRSRLWDPKEISR-----VLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           ++  ++ RLW  ++I +     VL++      + GIFLDLS++                 
Sbjct: 491 QDGSRQRRLWLHQDIIKGGIINVLQNKMKAANVRGIFLDLSEV----------------- 533

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
                               +++ S  +V             R LHW  +PL TLP++F 
Sbjct: 534 --------------------KDETSLDQV-------------RCLHWLKFPLETLPNDFN 560

Query: 416 PKNLVELNLRCSKVEQPWEGEK-------------------------------------- 437
           P NLV+L L  S++EQ W+G+K                                      
Sbjct: 561 PINLVDLRLPYSEIEQLWDGDKDTPCLRWVDLNHSSKLCSLSGLSKAEKLQRLNLEGCTT 620

Query: 438 -ACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR 496
              +P  ++  K L+ L+ KGC SL S P  ++ +   T+  S C    EFP IS  +  
Sbjct: 621 LKALPHDMKKMKMLAFLNLKGCTSLESLPE-MNLISLKTLTLSGCSTFKEFPLISDNIET 679

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
           LYL  +AI ++P+++E L  L VL+++ CK L+ I     +L++L  LIL  CLNL+ FP
Sbjct: 680 LYLDGTAISQLPTNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLKIFP 739

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI- 615
           EI   M  L  +  D T I  +P     LP L+ L +   +K+  LPD I  L  L ++ 
Sbjct: 740 EI--NMSSLNILLLDGTAIEVMP----QLPSLQYLCLSRNAKISYLPDGISQLSQLKWLD 793

Query: 616 LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
           L   ++++ +P        L+ LD+  C  L++  +
Sbjct: 794 LKYCTSLTSVPE---FPPNLQCLDAHGCSSLKTVSK 826



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 116/271 (42%), Gaps = 52/271 (19%)

Query: 517 LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPIT 576
           L+ L+L GC  LK +     K++ L  L L GC +LE  PE+                  
Sbjct: 610 LQRLNLEGCTTLKALPHDMKKMKMLAFLNLKGCTSLESLPEM------------------ 651

Query: 577 ELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
                  NL  L+ L +  CS     P    ++E LY      +AISQLP+++     L 
Sbjct: 652 -------NLISLKTLTLSGCSTFKEFPLISDNIETLYL---DGTAISQLPTNMEKLQRLV 701

Query: 637 SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL 696
            L+   CK LE  P   +  L A+  L +SD    +I  EI  +SSL IL L G   E +
Sbjct: 702 VLNMKDCKMLEEIPGR-VGELKALQELILSDCLNLKIFPEIN-MSSLNILLLDGTAIEVM 759

Query: 697 PAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGC 756
           P    Q+  L+++ L     +  LP+               +  L  L +    LDL  C
Sbjct: 760 P----QLPSLQYLCLSRNAKISYLPD--------------GISQLSQLKW----LDLKYC 797

Query: 757 NMLRSLPELPLCLQYLNLEDCNMLRSLPELP 787
             L S+PE P  LQ L+   C+ L+++ + P
Sbjct: 798 TSLTSVPEFPPNLQCLDAHGCSSLKTVSKPP 828



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 156/360 (43%), Gaps = 48/360 (13%)

Query: 478 FSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTD-LEVLDLRGCKRLKRISTSFC 536
           FS  ++L    Q   +  RL+L Q  I+     I  L + ++  ++RG      I     
Sbjct: 480 FSRELDLKASNQDGSRQRRLWLHQDIIK--GGIINVLQNKMKAANVRG------IFLDLS 531

Query: 537 KLRSLVTLILLGCLNLEHFP-EILEKMEHLKRIYSDRTPITELPSSFE---NLPGLEVLF 592
           +++   +L  + CL+   FP E L    +   +   R P +E+   ++   + P L  + 
Sbjct: 532 EVKDETSLDQVRCLHWLKFPLETLPNDFNPINLVDLRLPYSEIEQLWDGDKDTPCLRWVD 591

Query: 593 VEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
           +   SKL +L   +   E L  + L   + +  LP  +    ML  L+   C  LES P 
Sbjct: 592 LNHSSKLCSL-SGLSKAEKLQRLNLEGCTTLKALPHDMKKMKMLAFLNLKGCTSLESLPE 650

Query: 652 TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
             L+ L  + L   S +  +E P       ++E LYL G     LP  ++++ +L  +++
Sbjct: 651 MNLISLKTLTLSGCSTF--KEFP---LISDNIETLYLDGTAISQLPTNMEKLQRLVVLNM 705

Query: 712 EDFNMLQSLP----ELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELP- 766
           +D  ML+ +P    EL   L+ L L DC  L+  P +     ++ L     +  +P+LP 
Sbjct: 706 KDCKMLEEIPGRVGELK-ALQELILSDCLNLKIFPEINMSSLNILLLDGTAIEVMPQLPS 764

Query: 767 ---LCL-------------------QYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSL 804
              LCL                   ++L+L+ C  L S+PE P  LQ L    C+ L+++
Sbjct: 765 LQYLCLSRNAKISYLPDGISQLSQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTV 824


>gi|37574595|gb|AAQ93074.1| putative TIR-NBS type R protein 4 [Malus baccata]
          Length = 726

 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 172/431 (39%), Positives = 247/431 (57%), Gaps = 38/431 (8%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +  SD V+++GI GMGGIGKTT+ KAI+++F   FEG  F+  VR        L  LQKQ
Sbjct: 314 IGDSDDVRVIGISGMGGIGKTTIVKAIYNEFYERFEGKSFLEKVREKK-----LVKLQKQ 368

Query: 61  MLSTTLSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           +L   L  K +V+   +      ER RR+++L+++DDV++V QL+ L+G    FG GSRI
Sbjct: 369 LLFDILQTKTKVSSVAVGTALVGERFRRLRVLVIVDDVDDVKQLRELVGNCHSFGPGSRI 428

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TTR++RVL++F  +E  IYR NG++ EEA E     AFK + CP      +R VV+Y 
Sbjct: 429 IITTRNERVLKEFAVDE--IYRENGMDQEEALELLSWHAFKSSWCPSQYLVLTREVVNYC 486

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK-SIF 238
            G PL LEVLGS++  +  + W  +L +L  I   EI      LKIS++ L    K  IF
Sbjct: 487 GGLPLALEVLGSTIFKRSVNEWRSILDELKMIPRGEIQAQ---LKISYDGLNDHYKRQIF 543

Query: 239 LDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQI 294
           LDIA FF G DK+ V  ILD      +  +++L+D+ LV+I   N + MHD+L++MGR I
Sbjct: 544 LDIAFFFIGMDKNDVMQILDGCGFYATTGIEVLLDRCLVTIGRKNKIMMHDLLRDMGRDI 603

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V  E+   P +RSRLW PK++  VL    GT+ IEG+ L+L  ++  +    AF NM  L
Sbjct: 604 VHAENPGFPRERSRLWHPKDVHDVLIDKSGTEKIEGLALNLPSLEETSFSTDAFRNMKRL 663

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL                     QL+Y  V+L  G   L KKLR+L W  +PL  +P   
Sbjct: 664 RLL--------------------QLNY--VRLTGGYRCLSKKLRWLCWHGFPLEFIPIEL 701

Query: 415 KPKNLVELNLR 425
              N+V ++++
Sbjct: 702 CQPNIVAIDMQ 712


>gi|37574599|gb|AAQ93076.1| putative TIR-NBS type R protein 4 [Malus baccata]
          Length = 726

 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 171/431 (39%), Positives = 246/431 (57%), Gaps = 38/431 (8%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +  SD V+++GI G GGIGKTT+ KAI+++F   FEG  F+  VR        L  LQKQ
Sbjct: 314 IGDSDDVRVIGISGSGGIGKTTIVKAIYNEFYERFEGKSFLEKVREKK-----LVKLQKQ 368

Query: 61  MLSTTLSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
           +L   L  K +V+   +      ER RR+++L+++DDV++V QL+ L+G    FG GSRI
Sbjct: 369 LLFDILQTKTKVSSVAVGTALVGERFRRLRVLVIVDDVDDVKQLRELVGNCHSFGPGSRI 428

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           ++TTR++RVL++F  +E  IYR NG++ EEA E     AFK + CP      +R VV+Y 
Sbjct: 429 IITTRNERVLKEFAVDE--IYRENGMDQEEALELLSWHAFKSSWCPSQYLVLTREVVNYC 486

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK-SIF 238
            G PL LEVLGS++  +  + W  +L +L  I   EI      LKIS++ L    K  IF
Sbjct: 487 GGLPLALEVLGSTIFKRSVNEWRSILDELKMIPRGEIQAQ---LKISYDGLNDHYKRQIF 543

Query: 239 LDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQI 294
           LDIA FF G DK+ V  ILD      +  +++L+D+ LV+I   N + MHD+L++MGR I
Sbjct: 544 LDIAFFFIGMDKNDVMQILDGCGFYATTGIEVLLDRCLVTIGRKNKIMMHDLLRDMGRDI 603

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V  E+   P +RSRLW PK++  VL    GT+ IEG+ L+L  ++  +    AF NM  L
Sbjct: 604 VHAENPGFPRERSRLWHPKDVHDVLIDKSGTEKIEGLALNLPSLEETSFSTDAFRNMKRL 663

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           RL                     QL+Y  V+L  G   L KKLR+L W  +PL  +P   
Sbjct: 664 RLL--------------------QLNY--VRLTGGYRCLSKKLRWLCWHGFPLEFIPIEL 701

Query: 415 KPKNLVELNLR 425
              N+V ++++
Sbjct: 702 CQPNIVAIDMQ 712


>gi|297850156|ref|XP_002892959.1| hypothetical protein ARALYDRAFT_471969 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338801|gb|EFH69218.1| hypothetical protein ARALYDRAFT_471969 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 963

 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 228/827 (27%), Positives = 362/827 (43%), Gaps = 117/827 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG-GLEHLQKQML 62
           S+ V +VGIWGMGGIGKT++AK ++DQ S +F   CF  +++  S+  G  L+HLQK+ML
Sbjct: 202 SNEVLMVGIWGMGGIGKTSIAKCLYDQLSPKFPAHCFTENIKSVSKDIGHDLKHLQKEML 261

Query: 63  STTLSEKLEVAGPNIP-HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
              L + + +          K+R+   ++ +VLD V++V Q+  L  + + FG GSRI++
Sbjct: 262 CNILCDDIRLWSVEAGCQEIKKRLGNQRVFLVLDGVDKVSQVHALAKDKNWFGPGSRIII 321

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRD  +L     E   +Y V  L+ ++A   F   AF+    P+     S        G
Sbjct: 322 TTRDMGLLNTCGVE--IVYEVKCLDDKDALHMFKQIAFEGGLPPDSFEQLSIRASRLAHG 379

Query: 182 NPLVLEVLGSSLCLKRKSH----WGKVLHDLNRICESEI-HDIYDILKISFNKLTPRVKS 236
            P  ++    +L L+ ++     W + L  L    ES +  +I +ILKIS+  L    ++
Sbjct: 380 LPSAIQAY--ALFLRGRTATPDGWEEALSAL----ESSLDENIMEILKISYEGLPKPHQN 433

Query: 237 IFLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGN-FLNMHDILQEMGR 292
           +FL + C F G+    + S+L       S  + +L +KS + IS N  + MH ++++MGR
Sbjct: 434 VFLHVVCLFNGDTLQRITSLLHGPIPQSSLWIRVLAEKSFIKISTNGSVIMHKLVEQMGR 493

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGI-NLDPRAFTNM 351
           +I+R   +     R  L DP EI   L    G +  E + L   ++  + +++      M
Sbjct: 494 EIIR---DNMSLARKFLRDPMEIPDALAFRDGGEQTECMCLHTCELTCVLSMEASVVGRM 550

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
            NL+  K Y    Y                SK+QL     +LP+ LR  HWD +PLR LP
Sbjct: 551 HNLKFLKVYKHVDYR--------------ESKLQLIPDQQFLPRSLRLFHWDAFPLRALP 596

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
           S   P  LVELNLR S +E      + C+       K L  L   G + L+  P      
Sbjct: 597 SGSDPCFLVELNLRHSDLETL----RTCM------LKSLKRLDVTGSKYLKQLPDLSSIT 646

Query: 472 CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
               +    C  L   P+  GK +                                LK++
Sbjct: 647 SLEELLLEQCTRLDGIPECIGKRS-------------------------------TLKKL 675

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
             S+   R+    I L       FP+   KM+ L  I                  G ++ 
Sbjct: 676 KLSYRGGRTAQQHIGL------EFPDAKVKMDALINISI----------------GGDIS 713

Query: 592 FVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS---SHCKGLES 648
           F E CSK     + +      +  + +   + Q P  ++  N   SL     SH +  ES
Sbjct: 714 F-EFCSKFRGYAEYVSFNSEQHIPVISTMILQQAPWVISECNRFNSLSIMRFSHKENGES 772

Query: 649 FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
           F          +  L + +  +R IP  I +L  LE L LSGN+FE+LP  +  +S+L+ 
Sbjct: 773 FSFDIFPDFPDLKELKLVNLNIRRIPSGICHLELLEKLDLSGNDFENLPEAMNSLSRLKT 832

Query: 709 IHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLD-LTGCNM-----LRSL 762
           + L +   L+ LP+L   ++ L L + KM +    L F L++   L  C +         
Sbjct: 833 LWLRNCFKLEELPKLTQ-VQTLTLTNFKMREDTVYLSFALKTARVLNHCQISLVMSSHDF 891

Query: 763 PELPLCLQYLN------LEDCNMLRSLPELPLCLQLLTVRNCNRLQS 803
             LP  ++ L       L +C  L+S+  +P  LQ L    C+ L++
Sbjct: 892 ETLPPSIRDLTSLVTLCLNNCKKLKSVERIPTSLQFLDAHGCDSLEA 938



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 141/324 (43%), Gaps = 36/324 (11%)

Query: 514 LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI----Y 569
           L  L+ LD+ G K LK++      + SL  L+L  C  L+  PE + K   LK++     
Sbjct: 622 LKSLKRLDVTGSKYLKQLP-DLSSITSLEELLLEQCTRLDGIPECIGKRSTLKKLKLSYR 680

Query: 570 SDRTPITELPSSFENLP-----------GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
             RT    +   F +             G ++ F E CSK     + +      +  + +
Sbjct: 681 GGRTAQQHIGLEFPDAKVKMDALINISIGGDISF-EFCSKFRGYAEYVSFNSEQHIPVIS 739

Query: 619 ASAISQLPSSVALSNMLRSLDS---SHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQ 675
              + Q P  ++  N   SL     SH +  ESF          +  L + +  +R IP 
Sbjct: 740 TMILQQAPWVISECNRFNSLSIMRFSHKENGESFSFDIFPDFPDLKELKLVNLNIRRIPS 799

Query: 676 EIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDC 735
            I +L  LE L LSGN+FE+LP  +  +S+L+ + L +   L+ LP+L   ++ L L + 
Sbjct: 800 GICHLELLEKLDLSGNDFENLPEAMNSLSRLKTLWLRNCFKLEELPKLTQ-VQTLTLTNF 858

Query: 736 KMLQSLPVLPFCLESLD-LTGCNMLRSLPELPLCLQYLNLEDCN-MLRSLPEL-PLCLQL 792
           KM +    L F L++   L  C       ++ L +   + E     +R L  L  LCL  
Sbjct: 859 KMREDTVYLSFALKTARVLNHC-------QISLVMSSHDFETLPPSIRDLTSLVTLCLN- 910

Query: 793 LTVRNCNRLQSLPEILLCLQELDA 816
               NC +L+S+  I   LQ LDA
Sbjct: 911 ----NCKKLKSVERIPTSLQFLDA 930


>gi|357513691|ref|XP_003627134.1| Disease resistance protein [Medicago truncatula]
 gi|355521156|gb|AET01610.1| Disease resistance protein [Medicago truncatula]
          Length = 924

 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 205/656 (31%), Positives = 310/656 (47%), Gaps = 92/656 (14%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A+ +F +   ++E +CF+ +     E     +  Q Q+ S  LSE L        H
Sbjct: 95  KTTIARQMFAKHFAQYESACFLENA---CEEVDKFK--QMQVRSNLLSELLNRQITPTEH 149

Query: 80  FTKE---RVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
            +K    R+   K+ IVLDDV+    L  L   L   G  SR+++TTRDK +L    G  
Sbjct: 150 RSKSIRSRLTSTKVFIVLDDVDNAYILDYLCEPLGGLGPQSRLIITTRDKHILS---GTV 206

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
            +IY V   +FEE+ + FC  AFK+ +  E     S+  +    G PL L+VLG     +
Sbjct: 207 DEIYEVTKWKFEESQKLFCLGAFKQTYPEEGYKGFSKIAIECAGGVPLALKVLGLHFKKR 266

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
               W   L+ + +  ES + +I  +LK+S+N+L  + K +FLD+A FF+ E+KDFV  I
Sbjct: 267 EYEFWESELNYMEKRGES-LGEIQQVLKVSYNRLPLQQKEMFLDVAFFFKDENKDFVIRI 325

Query: 257 LDD---SESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           LD    S    ++ L DK+L++IS  N + MHD+LQ++   IVR      P K+S   D 
Sbjct: 326 LDACGFSAIGGIESLKDKALITISKTNRIQMHDLLQQLAFDIVRIG----PKKQSPFRD- 380

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPS 372
           KE+S VLK  KG DA+ GI  DLS+   +++    F  M+ LR  K YVP          
Sbjct: 381 KEVSDVLKSKKGNDAVRGIIFDLSQKVNLHIQANTFNEMTYLRFLKLYVP---------- 430

Query: 373 MSTEEQLSYSKVQLPN-GLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
           M  E+    +K+  P+ G+     +LRYL W  YP ++LP  F  + LVE++L  S +E 
Sbjct: 431 MGKEKS---TKLYPPDQGIMPFSDELRYLEWSEYPFKSLPHPFCAEYLVEIHLPHSNIEH 487

Query: 432 PWEGEKACVPSSIQN------------------FK----YLSALS--------------- 454
            WEG +  +  S +                   FK    YLS                  
Sbjct: 488 IWEGNQIRLRVSAETINIRECKKLIKLLDLSRAFKLKCLYLSGCQSLCEIKPHIFSKDTI 547

Query: 455 ----FKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSS 510
                 GC++L+S  S  H      I+   C  L EF   S  + RL L  + I+++  S
Sbjct: 548 VTVLLDGCKNLQSLISRDHLRSLEEIDVRGCCRLKEFSVSSDSIERLDLTNTGIDKLNPS 607

Query: 511 IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYS 570
           I  +  L  L+L G   L  +   F  L SL  L L  C NL+  PE+     HLK  ++
Sbjct: 608 IGRMCKLVRLNLEGL-LLDNLPNEFSDLGSLTELCLSNCKNLQLLPEL---PPHLKVFHA 663

Query: 571 DR----TPITELPSSFENLPGLEV-LFVEDCSKLD-------NLPDNIGSLEYLYY 614
           +        + L +  E + G E+ +  ++C+ LD       NL D I ++++  +
Sbjct: 664 ENCTSLVTTSTLKTFSEKMNGKEIYISYKNCTSLDRPSSIDRNLEDGILTMKHAAF 719


>gi|357499691|ref|XP_003620134.1| Resistance protein [Medicago truncatula]
 gi|355495149|gb|AES76352.1| Resistance protein [Medicago truncatula]
          Length = 1110

 Score =  233 bits (594), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 258/862 (29%), Positives = 393/862 (45%), Gaps = 145/862 (16%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE-KLEVA----G 74
           KTTLA  +++    +FE SCF   VR   E+  GL +LQK +LS  + E K+E+     G
Sbjct: 12  KTTLALEVYNSIVRQFECSCFFEKVRDFKES--GLIYLQKILLSQIVGETKMEITSVRQG 69

Query: 75  PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRG 134
            +I    ++R+ + K+L++LDDV++  QLK + G  D FG GSR+++TTRDKR+L  + G
Sbjct: 70  VSI---LQQRLHQKKVLLLLDDVDKDEQLKAIAGSSDWFGLGSRVIITTRDKRLL-TYHG 125

Query: 135 EEKKIYRVNGLEFEEAFEHFCNFAFKENHCP---------------------------ED 167
            E+  Y V GL    AF+     A K ++ P                            D
Sbjct: 126 IER-TYEVKGLNDAAAFDLVGWKALKNDYSPIYKDVLLEQKQGRELNANELRRLKDLKND 184

Query: 168 LNWHS-----RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDI 222
           + + S     +  V+Y  G PL LEV+GS    K       VL    R+ + +I      
Sbjct: 185 VRFSSYANVLKRAVAYASGLPLALEVIGSHFFNKTIEQCNYVLDRCERVPDKKIQTT--- 241

Query: 223 LKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDVL----DILIDKSLVSIS- 277
           L++SF+ L    K +FLDIAC  +G +   V  IL     +++    D+L++KSL+ IS 
Sbjct: 242 LQVSFDALQDEDKFVFLDIACCLKGWNLIRVEEILHAHYGNIMKDHIDVLVEKSLIKISD 301

Query: 278 -GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS 336
            GN + +HD++++MG++IVR+ES + PGKR+RLW  ++I +V K N GT  I+ I     
Sbjct: 302 SGN-ITLHDLIEDMGKEIVRRESPENPGKRTRLWAYEDIKKVFKENTGTSTIKIIHFQFD 360

Query: 337 ---KIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNG---L 390
              + K    D +AF  M NLR   F  P  +              S +   +PN    L
Sbjct: 361 PWIEKKKDASDGKAFKKMKNLRTLIFSTPVCF--------------SETSEHIPNSLRVL 406

Query: 391 DYLPKKLRYLHWDTYPLRTLPSNFKPK--NLVELNLRCSKV--EQPWEGEKACVPSSIQN 446
           +Y  +   Y H     L       K K  N+  LN  C  +    P           I N
Sbjct: 407 EYSNRNRNYYHSRGSNLFEWDGFLKKKFGNMKVLNYDCDTLLTRMP----------DISN 456

Query: 447 FKYLSALSFKGCQSLRSFPSNLHFVCPVTI-NFSYCVNLIEFPQI-SGKVTRLYLGQ-SA 503
              L   S + C SL +   ++ F+  + I     C NL   P + S  +  L L    +
Sbjct: 457 LPNLEQFSIQDCTSLITIDESIGFLSKLKILRLIGCHNLHSVPPLNSASLVELNLSHCHS 516

Query: 504 IEEVPSSIEC-LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM 562
           +E  P  +   L +L++L + GC +++ I +    L SL  L LL C +L+ F  +    
Sbjct: 517 LESFPLVVSGFLGELKILRVIGCSKIRLIQSLV--LPSLEELDLLDCTSLDSFSNM---- 570

Query: 563 EHLKRIYSDRTPITELPSSFE-------NLPGLEVLFVEDCSKLDNL-PDNIGSLEYLYY 614
                ++ D+         +E        L  LE L++  C  L ++ P  + SLE L  
Sbjct: 571 -----VFGDKLKTMSFRGCYELRSIPPLKLDSLEKLYLSYCPNLVSISPLKLDSLEKL-- 623

Query: 615 ILAAASAISQLPSSV-ALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
           +L+    +   PS V  L + L++L   +C  L S P   L  L  + LLH  +     +
Sbjct: 624 VLSNCYKLESFPSVVDGLLDKLKTLFVKNCHNLRSIPALKLDSLEKLDLLHCHNL----V 679

Query: 674 PQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHL 732
                 L SLE L LS     ES P+++  +                       LK L +
Sbjct: 680 SISPLKLDSLEKLVLSNCYKLESFPSVVDGLLNK--------------------LKTLFV 719

Query: 733 IDCKMLQSLPVLPF-CLESLDLTGCNMLRSLPE----LPLCLQYLNLEDCNMLRSLPELP 787
            +C  L+++P L    LE LDL+ C  L S P     L   L++LN+ +C MLR++P L 
Sbjct: 720 KNCHNLRNIPALKLDSLEKLDLSDCYKLESFPSVVDGLLDKLKFLNIVNCIMLRNIPRLS 779

Query: 788 LC-LQLLTVRNCNRLQSLPEIL 808
           L  L+   +  C RL+S PEIL
Sbjct: 780 LTSLEHFNLSCCYRLESFPEIL 801



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 168/386 (43%), Gaps = 49/386 (12%)

Query: 450 LSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEF-PQISGKVTRLYLGQS-AIEEV 507
           L  +SF+GC  LRS P  L       +  SYC NL+   P     + +L L     +E  
Sbjct: 576 LKTMSFRGCYELRSIPP-LKLDSLEKLYLSYCPNLVSISPLKLDSLEKLVLSNCYKLESF 634

Query: 508 PSSIECLTD-LEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF-PEILEKMEHL 565
           PS ++ L D L+ L ++ C  L+ I     KL SL  L LL C NL    P  L+ +E L
Sbjct: 635 PSVVDGLLDKLKTLFVKNCHNLRSIPA--LKLDSLEKLDLLHCHNLVSISPLKLDSLEKL 692

Query: 566 KRIYSDRTPITELPSSFENLPG-LEVLFVEDCSKLDNLPD-NIGSLEYLYYILAAASAIS 623
             + S+   +   PS  + L   L+ LFV++C  L N+P   + SLE L   L+    + 
Sbjct: 693 --VLSNCYKLESFPSVVDGLLNKLKTLFVKNCHNLRNIPALKLDSLEKLD--LSDCYKLE 748

Query: 624 QLPSSV-ALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGL-------------------- 662
             PS V  L + L+ L+  +C  L + PR  L  L    L                    
Sbjct: 749 SFPSVVDGLLDKLKFLNIVNCIMLRNIPRLSLTSLEHFNLSCCYRLESFPEILGEMRNIP 808

Query: 663 -LHISDYAVREIPQEIAYLSSLEILYLSGNNFESLP---AIIKQMSQLRFIHLEDFNMLQ 718
            LH+ +  ++E P +   L+  +        +  LP    ++ + ++L     E  N +Q
Sbjct: 809 RLHLDETPIKEFPFQFQTLTQPQRFVSCDCGYGRLPNRDVVMSESAELTIKAEEKMNQMQ 868

Query: 719 SLPELPLCLKYLHLIDCKMLQ---SLPVLPFC-LESLDLTGCNMLRSLPELPLC--LQYL 772
           S       +KY+ + +CK+     S+ ++ F  ++ L +T C        +  C  L  +
Sbjct: 869 SSH-----VKYICVRNCKLSDEYLSISLMLFANVKELHITNCQFTVIPKSIEKCQFLWKI 923

Query: 773 NLEDCNMLRSLPELPLCLQLLTVRNC 798
            L+DC  L  +  +P CL+ L+  NC
Sbjct: 924 VLDDCKELMEMKGIPPCLRELSALNC 949



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 164/397 (41%), Gaps = 53/397 (13%)

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQL---SYSKVQLPNGLDYLPKKLRYLHW-DTYPLRTL 410
           +L+  Y P    I  L   S E+ +    Y     P+ +D L  KL+ L   + + LR++
Sbjct: 600 KLYLSYCPNLVSISPLKLDSLEKLVLSNCYKLESFPSVVDGLLDKLKTLFVKNCHNLRSI 659

Query: 411 PSNFKPKNLVELNL-RCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLH 469
           P+  K  +L +L+L  C  +          V  S      L  L    C  L SFPS + 
Sbjct: 660 PA-LKLDSLEKLDLLHCHNL----------VSISPLKLDSLEKLVLSNCYKLESFPSVVD 708

Query: 470 FVCPV--TINFSYCVNLIEFPQIS-GKVTRLYLGQS-AIEEVPSSIECLTD-LEVLDLRG 524
            +     T+    C NL   P +    + +L L     +E  PS ++ L D L+ L++  
Sbjct: 709 GLLNKLKTLFVKNCHNLRNIPALKLDSLEKLDLSDCYKLESFPSVVDGLLDKLKFLNIVN 768

Query: 525 CKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
           C  L+ I      L SL    L  C  LE FPEIL +M ++ R++ D TPI E P  F+ 
Sbjct: 769 CIMLRNIPR--LSLTSLEHFNLSCCYRLESFPEILGEMRNIPRLHLDETPIKEFPFQFQT 826

Query: 585 LPGLEVLFVEDCSKLDNLPD-NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHC 643
           L   +     DC     LP+ ++   E     + A   ++Q+ SS      ++ +   +C
Sbjct: 827 LTQPQRFVSCDCG-YGRLPNRDVVMSESAELTIKAEEKMNQMQSS-----HVKYICVRNC 880

Query: 644 KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
           K  + +    L+  + +  LHI++                         F  +P  I++ 
Sbjct: 881 KLSDEYLSISLMLFANVKELHITNC-----------------------QFTVIPKSIEKC 917

Query: 704 SQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQS 740
             L  I L+D   L  +  +P CL+ L  ++C +  S
Sbjct: 918 QFLWKIVLDDCKELMEMKGIPPCLRELSALNCILTSS 954


>gi|15242338|ref|NP_199336.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9759608|dbj|BAB11396.1| disease resistance protein RPS4 [Arabidopsis thaliana]
 gi|332007836|gb|AED95219.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1231

 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 241/775 (31%), Positives = 356/775 (45%), Gaps = 120/775 (15%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           + +  +IV + GM GIGKT LAK +F +   +     F+   R  S   G  E LQK+++
Sbjct: 234 NDNETRIVEVVGMPGIGKTYLAKKLFAKLKKKINHCVFIEFKREMSAEQGS-EWLQKRLV 292

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKR-LIGELDQFGQGSRIVV 121
              L  + +    N     K+ +   K++IV DDV++  Q+   L G  D   +GS IV+
Sbjct: 293 EGLLDIQ-DCTDTNALEVWKDSLIDKKVVIVFDDVSDKKQISEPLKGICDWIKKGSMIVI 351

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHF-----CNFAFKENHCPEDLNWHSRSVV 176
           TTRDK + E   G    +Y V GL   +  E F     CN    E +  E     SR  V
Sbjct: 352 TTRDKSLTE---GLVTDLYEVPGLNERDGLELFRAQVCCNI---EGNFME----LSRKFV 401

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
            + +GNPL LE  G  L  K ++HW   L  L +     I +    L+ S+++L  + K 
Sbjct: 402 DFARGNPLALEEFGKELRGKDEAHWETRLGTLAQHSNPTIREK---LRSSYDELNEQQKD 458

Query: 237 IFLDIACFFEGEDKDFVASILD--DSES----DVLDILIDKSLVSISGNFLNMHDILQEM 290
            FLDIA FF  +D+ +V S+LD  D ES         L DK L+ +    + MHD+L  M
Sbjct: 459 AFLDIAYFFRSQDESYVRSLLDSYDPESAESGQEFRDLADKFLIGVCDGRVEMHDLLFTM 518

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
            ++IV   +EK     S   + K     L   +G D + GI LD+S+++   L    F  
Sbjct: 519 AKEIVEATAEKSRLLLSSCAELKNKELSLDQ-QGRDKVRGIVLDMSEMEEKPLKRAVFVG 577

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKK--LRYLHWDTYPLR 408
           MS+LR  K Y           S+      +  K+ LP+GL++ PK   +R LHW  +P  
Sbjct: 578 MSSLRYLKVY----------SSLCPTHSKTECKLHLPDGLEF-PKDNIVRCLHWVKFPGT 626

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            LP +F P NL++L L  S +   W   K        N K++            S  SNL
Sbjct: 627 ELPPDFYPNNLIDLRLPYSNITTLWSCTKVA-----PNLKWVDL----------SHSSNL 671

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKR 527
           + +          + L E P +     RL L G ++++E+P  ++ +T+L  L+LRGC  
Sbjct: 672 NSL----------MGLSEAPNL----LRLNLEGCTSLKELPDEMKDMTNLVFLNLRGCTS 717

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPG 587
           L  +S       SL TLIL GC + + F  I    EHL+ +Y + T I  LP +  NL  
Sbjct: 718 L--LSLPKITTNSLKTLILSGCSSFQTFEVI---SEHLESLYLNGTEINGLPPAIGNLHR 772

Query: 588 LEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLE 647
           L  L ++DC  L  LPD +G L+                        L+ L  S C  L+
Sbjct: 773 LIFLNLKDCKNLATLPDCLGELKS-----------------------LQELKLSRCSKLK 809

Query: 648 SFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR 707
            FP      + ++ +L +   ++ E+P  I +LSSL  L LS N+          +  LR
Sbjct: 810 IFP-DVTAKMESLLVLLLDGTSIAELPCSIFHLSSLRRLCLSRND---------NIRTLR 859

Query: 708 FIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSL 762
           F     F+           LK+L L  CK L SLP+LP  L+ L+  GC  LR++
Sbjct: 860 FDMGHMFH-----------LKWLELKYCKNLTSLPILPPNLQCLNAHGCTSLRTV 903



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 151/620 (24%), Positives = 242/620 (39%), Gaps = 121/620 (19%)

Query: 489  QISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG 548
            Q   KV  + L  S +EE P        +  L      R  ++ +S C   S     L  
Sbjct: 550  QGRDKVRGIVLDMSEMEEKPLKRAVFVGMSSL------RYLKVYSSLCPTHSKTECKL-- 601

Query: 549  CLNLEHFPEILE--KMEHLKRIYSDRTPITELPSSFE-------NLPGLEVLFVEDCSKL 599
                 H P+ LE  K   ++ ++  + P TELP  F         LP   +  +  C+K+
Sbjct: 602  -----HLPDGLEFPKDNIVRCLHWVKFPGTELPPDFYPNNLIDLRLPYSNITTLWSCTKV 656

Query: 600  D-NL-------PDNIGSL-------EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
              NL         N+ SL         L   L   +++ +LP  +     L  L+   C 
Sbjct: 657  APNLKWVDLSHSSNLNSLMGLSEAPNLLRLNLEGCTSLKELPDEMKDMTNLVFLNLRGCT 716

Query: 645  GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
             L S P+     L  + L   S +   E+  E      LE LYL+G     LP  I  + 
Sbjct: 717  SLLSLPKITTNSLKTLILSGCSSFQTFEVISE-----HLESLYLNGTEINGLPPAIGNLH 771

Query: 705  QLRFIHLEDFNMLQSLPELPLCLKYLH---LIDCKMLQSLPVLPFCLESLDLTGCNMLRS 761
            +L F++L+D   L +LP+    LK L    L  C  L+  P +   +ESL +   +   S
Sbjct: 772  RLIFLNLKDCKNLATLPDCLGELKSLQELKLSRCSKLKIFPDVTAKMESLLVLLLDGT-S 830

Query: 762  LPELP-----------LCL-------------------QYLNLEDCNMLRSLPELPLCLQ 791
            + ELP           LCL                   ++L L+ C  L SLP LP  LQ
Sbjct: 831  IAELPCSIFHLSSLRRLCLSRNDNIRTLRFDMGHMFHLKWLELKYCKNLTSLPILPPNLQ 890

Query: 792  LLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKL 851
             L    C  L+++                     SP  Q  P   +     F FTNC +L
Sbjct: 891  CLNAHGCTSLRTVA--------------------SP--QTLPTPTEQIHSTFIFTNCHEL 928

Query: 852  NGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSS 911
               + N I+  S ++ +   +++ R   +      +          PG EIP WF++Q+ 
Sbjct: 929  EQVSKNAII--SYVQKKSKLMSADRYSPDFVYKSLIG------TCFPGCEIPAWFNHQAL 980

Query: 912  GSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDL 971
            GS + ++LP   +   +IG A C V+  K+   D      V    +    +LS+   +  
Sbjct: 981  GSVLILELPQAWNSSRIIGIALCVVVSFKEY-RDQNSSLQVQCTCEFTNVSLSQESFMVG 1039

Query: 972  GYNSRYIED-LIDSDRVILGFKPCLNVG----FPDGYHHTIATFKF-----FAERKFYKI 1021
            G++ +  E   ++SD + +G+   LN+     FP     T  + +F      +E +  K+
Sbjct: 1040 GWSEQGDETHTVESDHIFIGYTTLLNIKNRQQFPLA---TEISLRFQVTNGTSEVEKCKV 1096

Query: 1022 KRCGLCPVYANPSETKDNTF 1041
             +CG   VY  P+E    ++
Sbjct: 1097 IKCGFSLVY-EPNEADSTSW 1115


>gi|13509227|emb|CAC35333.1| N2-C protein [Linum usitatissimum]
          Length = 1119

 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 260/913 (28%), Positives = 415/913 (45%), Gaps = 156/913 (17%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +DSS + +I+GI GMGG+GKTTLAKA++D+    FE   F+ ++R       G+  +Q +
Sbjct: 227  LDSSASEKIIGIHGMGGLGKTTLAKAVYDKVFTRFERCFFLENIRDTLSEKNGVLIMQNK 286

Query: 61   MLSTTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            ++S  L +    A    +     ++RV R KLLIVLDDV+E  Q   ++G+LD F   SR
Sbjct: 287  IISGILRKDFNEAKYASDGIRIIRDRVCRHKLLIVLDDVDEKFQFDEVLGKLDNFSMDSR 346

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
             ++TTRD R LE  R  E K++ +  +  + +   F   AF  +  PED    S+  V  
Sbjct: 347  FLITTRDARGLELLR--ECKMFELQEMSPDHSLTLFNKNAFGVDCPPEDYAILSKEFVQA 404

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL ++V+GS L    K  W + L +L +I  +++ +    LKIS+N+LT   K IF
Sbjct: 405  AAGLPLYIKVIGSLLFCMDKIFWEEKLEELKKISPTKVQER---LKISYNELTHNEKQIF 461

Query: 239  LDIACFFEGEDKDFVASILDDSESD-----VLDILIDKSLVS-----ISGNFLN---MHD 285
            LDIAC+F G  K  +  IL  S+ D      +  L  +SL+      + G+ +N   MH+
Sbjct: 462  LDIACYFIGLSK--IEPILMWSDCDFYPESTIRYLTQRSLIKLQRSEVKGDDINTFQMHN 519

Query: 286  ILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDP 345
             ++++GR IVR+E+ + P KRSR+W  K+   +LKH KGTD +E + +D+   +G +L  
Sbjct: 520  HVRDLGRAIVREENNQNPYKRSRIWSNKDAIDMLKHKKGTDCVEVLTVDM---EGEDL-- 574

Query: 346  RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGL-DYLPKKLRYLHWDT 404
               TN               E+EKL  +     LS S  +L     D LP  LR+L    
Sbjct: 575  -ILTNK--------------ELEKLTRL---RYLSVSNARLAGDFKDVLP-NLRWLR--L 613

Query: 405  YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSF 464
            +   ++P+      LV+L L    V   W+G      + ++  + L A+S K C  L+  
Sbjct: 614  HSCDSVPTGLYLNKLVDLELVDCSVRDGWKGW-----NELKVARKLKAVSLKRCFHLKKV 668

Query: 465  PSNLHFVCPVTINFSYC-------------------VNLIEFPQISGKVTR------LYL 499
            P          + FS C                   ++  +  +I G++ R      L+ 
Sbjct: 669  PDFSDCEDLEWLAFSECRKMRGEVDIGNFKSLRYLLISNTKITKIKGEIGRLRNLKYLHA 728

Query: 500  GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFC----------------------- 536
              S+++EVP+ I  L+ LE L L      K   T                          
Sbjct: 729  DHSSLKEVPAGISKLSSLEWLSLTLTDPYKSDFTEMLPASLTVLSISNDMQKSSPDISVD 788

Query: 537  ---KLRSLVTLILLGCLNLE-HFPEI--LEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
               +L +L  LI L  L L+    EI  L +++ L+ +  +R P        ENL  L+ 
Sbjct: 789  NLQRLPNLSNLINLSMLILDVGIGEILGLGELKMLEYLVIERAPRVVHLDGLENLVLLKT 848

Query: 591  LFVEDCSKLDNLPDNIG--SLEYLYYI----LAAASAISQLPSSVALSNMLRSLDSSHCK 644
            + V+ C  L  LP  +    LE L+ +    +     + QL  S  LSN L  +  S   
Sbjct: 849  ISVKGCPVLGKLPSLVALTRLEVLWIVDCPLITEVHGVGQLWES--LSN-LNVVGCSALI 905

Query: 645  GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
            GLE+      L      L+ +       +P  ++  + L  L L              MS
Sbjct: 906  GLEALHSMVKL----RSLILMGAKITETVPSSLSMFTQLTTLGLCF------------MS 949

Query: 705  QLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPE 764
            Q +F +L +   L+ L  +  CL+ + +     L+S       LE L L+GC  +R +P+
Sbjct: 950  QEQFPNLSNLKNLRELG-MDYCLELIEVPGLDTLES-------LEYLSLSGCQSIRKVPD 1001

Query: 765  LPLC--LQYLNLEDCNMLRSL-----------PELPLCLQLLTVRNCNRLQSLPEILL-- 809
            L     L+ L++E C  L+ +            ++  C  +  + N + L++L E+LL  
Sbjct: 1002 LSGMKKLKTLDVEGCIQLKEVEGLERLESLEELKMSGCKSIEELPNLSGLKNLRELLLKG 1061

Query: 810  CLQELDASVLEKL 822
            C+Q  + + LE L
Sbjct: 1062 CIQLKEVNGLEGL 1074


>gi|297794599|ref|XP_002865184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311019|gb|EFH41443.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1750

 Score =  233 bits (593), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 160/450 (35%), Positives = 250/450 (55%), Gaps = 40/450 (8%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS------DVRGNSETAGGLEHLQ 58
           +  ++VGIWG  GIGKTT+A+A+F+  +  F+G  F+        + G      G  +++
Sbjct: 201 EEARMVGIWGPSGIGKTTIARALFNLLARHFQGKAFIDRAFVSKSIEGYRRAKTGDHNMK 260

Query: 59  KQMLSTTLSEKLEVAGPNIP--HFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFG 114
             +  + LSE   + G NI   H    +ER++  K+LI++DD++++  L+ L G+   FG
Sbjct: 261 LSLQGSFLSE---ILGKNIKIEHLGALRERLKHRKVLIIIDDLDDLVVLEALAGQTQWFG 317

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
            GSRI+V T+DK +LE    +   IY+V     ++A E FC  AF +N  P+     +  
Sbjct: 318 SGSRIIVVTKDKHLLEAHGIDH--IYKVGFPSEKQALEMFCRSAFSQNSPPDGFMELASE 375

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL-TPR 233
           V +++ G PL L +LG  +  + K  W   +  L R+ +S   DI + L+ S+++L +  
Sbjct: 376 VAAFSGGLPLGLVILGKVVKGRNKEDW---IDMLPRLRKSPNRDIVETLRFSYDELDSEE 432

Query: 234 VKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSI-----SGNFLNMHD 285
            K+I   IAC F G D + +  +L DSE DV   L  L DKSL+++     + N + MH 
Sbjct: 433 DKAILRHIACLFNGVDVNNIKMMLSDSELDVNIGLKNLADKSLINVVPSWNNTNIVEMHC 492

Query: 286 ILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDP 345
           ++QEMGR +VR++S+K PGKR  L + K+I  VL+   GT+ + GI LD+ ++K + +  
Sbjct: 493 LVQEMGRDVVRKQSDK-PGKREFLMNSKDICDVLRGCTGTEKVLGISLDIDEVKKVRIHK 551

Query: 346 RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
            AF  M+NLR  KFY             S+ E+    +  LP   D  P KL+ L W  Y
Sbjct: 552 NAFDGMTNLRFLKFY------------KSSLERKKGFRWDLPERFDDFPDKLKLLSWPGY 599

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWEG 435
           P+R + SNF P+ LVEL +  SK+E+ WEG
Sbjct: 600 PMRCMLSNFCPEYLVELRMPNSKLEKLWEG 629



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 176/371 (47%), Gaps = 59/371 (15%)

Query: 323  KGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYS 382
            KGT+ + GI LD+ ++K + +   AF  M+NLR  KFY             S+ E+    
Sbjct: 1138 KGTEKVLGISLDIDEVKKVRIHKNAFDGMTNLRFLKFY------------KSSLERKKGF 1185

Query: 383  KVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPS 442
            +  LP   +  P KL+ L W  YP+R +PSNF P+ LVEL +  SKVE+ WEG       
Sbjct: 1186 RWDLPERFNDFPDKLKLLSWPGYPMRCMPSNFCPEYLVELRMPNSKVEKLWEG------- 1238

Query: 443  SIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQS 502
             ++    L  + F   ++LR  P         T+  + C +L+E   IS  +++L L Q+
Sbjct: 1239 -VELLTCLKHMDFSESENLREIPDLSTATNLDTLVLNGCSSLVELHDISRNISKLNLSQT 1297

Query: 503  AIEEVPSS--IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI-- 558
            +I + PS   +E L +L +    G  + +R       L SL  ++  GC NL+  P++  
Sbjct: 1298 SIVKFPSKLHLEKLVELYM----GQTKNERFWEGVQPLPSLKKIVFSGCANLKELPDLSM 1353

Query: 559  LEKMEHLKRIYSDRTPITELP-SSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILA 617
              ++E L    SD + + E+  S+ +NL  L +L +  CS L+ LP+ I           
Sbjct: 1354 ATRLETLN--LSDCSSLAEVTLSTIQNLNKLMILDMTRCSSLETLPEGI----------- 1400

Query: 618  AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI 677
                   LPS       L  L+ + C  L SFP       + + +L+++   V E+PQ I
Sbjct: 1401 ------NLPS-------LYRLNLNGCSRLRSFPNIS----NNIAVLNLNQTGVEEVPQWI 1443

Query: 678  AYLSSLEILYL 688
                SLE+L +
Sbjct: 1444 ENFFSLELLEM 1454



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 108/197 (54%), Gaps = 15/197 (7%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVS------DVRGNSETAGGLEHL 57
            S+  ++VGIWG  GIGKTT+A+A+F+  S  F+G  F+        + G      G  ++
Sbjct: 946  SEEARMVGIWGPSGIGKTTIARALFNLLSRHFQGKAFIDRAFVSKSIEGYRGAKTGDHNM 1005

Query: 58   QKQMLSTTLSEKLEVAGPNIP--HFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQF 113
            +  +  + LSE   + G NI   H    +ER++  K+LI++DD++++  L+ L G+   F
Sbjct: 1006 KLSLQGSFLSE---ILGKNIKIEHLGALRERLKHRKVLIIIDDLDDLVVLEALAGQTQWF 1062

Query: 114  GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSR 173
            G GSRI+V T+DKR+LE        IY+V     ++A E FC  AF ++  P+     + 
Sbjct: 1063 GSGSRIIVVTKDKRLLEAHGVHH--IYKVCFPSEKQALEMFCRSAFTQSSPPDGFMELAS 1120

Query: 174  SVVSYTKGNPLVLEVLG 190
             V + +   PL L +LG
Sbjct: 1121 EVAACSGRLPLGLVILG 1137



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 181/413 (43%), Gaps = 42/413 (10%)

Query: 577  ELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR 636
            +LP  F + P    L       +  +P N    EYL  +    S + +L   V L   L+
Sbjct: 1188 DLPERFNDFPDKLKLLSWPGYPMRCMPSNFCP-EYLVELRMPNSKVEKLWEGVELLTCLK 1246

Query: 637  SLDSSHCKGLESFPR--------TFLL-GLSAMGLLH----------ISDYAVREIPQEI 677
             +D S  + L   P         T +L G S++  LH          +S  ++ + P ++
Sbjct: 1247 HMDFSESENLREIPDLSTATNLDTLVLNGCSSLVELHDISRNISKLNLSQTSIVKFPSKL 1306

Query: 678  AYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC--LKYLHLIDC 735
             +L  L  LY+     E     ++ +  L+ I       L+ LP+L +   L+ L+L DC
Sbjct: 1307 -HLEKLVELYMGQTKNERFWEGVQPLPSLKKIVFSGCANLKELPDLSMATRLETLNLSDC 1365

Query: 736  KMLQSLPVLPFC----LESLDLTGCNMLRSLPE---LPLCLQYLNLEDCNMLRSLPELPL 788
              L  + +        L  LD+T C+ L +LPE   LP  L  LNL  C+ LRS P +  
Sbjct: 1366 SSLAEVTLSTIQNLNKLMILDMTRCSSLETLPEGINLP-SLYRLNLNGCSRLRSFPNISN 1424

Query: 789  CLQLLTVRNCNRLQSLP---EILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEF 845
             + +L + N   ++ +P   E    L+ L+     +L   SP + +  ++L   A    F
Sbjct: 1425 NIAVLNL-NQTGVEEVPQWIENFFSLELLEMWECNQLKCISPSI-FTLDNLNKVA----F 1478

Query: 846  TNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDW 905
            ++C +L      + + D+     ++A+ +    +       + +    ++VLPG E+P +
Sbjct: 1479 SDCEQLTEVIWPEEVEDTNNARTNLALITFTNCFNSNQEAFIQQSASQILVLPGVEVPPY 1538

Query: 906  FSNQSSGSSICIQLPPHS-SCRNLIGFAFCAVLDSKKVDSD-CFRYFYVSFQF 956
            F+ +S+GSS+ I L   S S ++ + F  C V+  + V+   CF    V  +F
Sbjct: 1539 FTYRSNGSSLTIPLHRSSLSQQSFLEFKACVVVSEETVNHQLCFIDIQVHCRF 1591



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 91/214 (42%), Gaps = 15/214 (7%)

Query: 350  NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
            N+S   + KF  P    +EKL  +   +       +   G+  LP   + +      L+ 
Sbjct: 1293 NLSQTSIVKF--PSKLHLEKLVELYMGQT---KNERFWEGVQPLPSLKKIVFSGCANLKE 1347

Query: 410  LPSNFKPKNLVELNLR-CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            LP       L  LNL  CS + +          S+IQN   L  L    C SL + P  +
Sbjct: 1348 LPDLSMATRLETLNLSDCSSLAE-------VTLSTIQNLNKLMILDMTRCSSLETLPEGI 1400

Query: 469  HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
            +      +N + C  L  FP IS  +  L L Q+ +EEVP  IE    LE+L++  C +L
Sbjct: 1401 NLPSLYRLNLNGCSRLRSFPNISNNIAVLNLNQTGVEEVPQWIENFFSLELLEMWECNQL 1460

Query: 529  KRISTSFCKLRSLVTLILLGCLNLEH--FPEILE 560
            K IS S   L +L  +    C  L    +PE +E
Sbjct: 1461 KCISPSIFTLDNLNKVAFSDCEQLTEVIWPEEVE 1494


>gi|147792427|emb|CAN68030.1| hypothetical protein VITISV_003124 [Vitis vinifera]
          Length = 1039

 Score =  232 bits (592), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 212/668 (31%), Positives = 312/668 (46%), Gaps = 104/668 (15%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A AI+++ S++++GS F+  V+  SE       LQ ++L   L  K  +   NI  
Sbjct: 229 KTTVAMAIYNELSNQYDGSSFLRKVKERSER--DTLQLQHELLQDILRGK-SLKLSNIDE 285

Query: 80  FTKERVRRM---KLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
             K   R +   ++L+V DDV+ + QL+ L  E   FG  S I++TTRDK +L ++    
Sbjct: 286 GVKMIKRSLSSKRVLVVFDDVDNLKQLEYLAEEQGWFGAKSTIIITTRDKNLLAQYGVNI 345

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKEN---HCPEDLNWHSRSVVSYTKGNPLVLEVLGSSL 193
           +  Y V  L  EEA E F  +AF++N      +DL +    VV Y KG PL L+VLGS+ 
Sbjct: 346 E--YEVTTLNEEEAXELFSLWAFRQNLPNKVDQDLFYE---VVRYAKGLPLALKVLGSNF 400

Query: 194 CLKR-KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDF 252
             K+ K  W   L  L +   S    IY +L+ S++ L    K IFLDIACFF+G+DKDF
Sbjct: 401 FDKKTKEEWKSALEKLKK---SSDERIYSVLRTSYDGLDSVDKDIFLDIACFFKGKDKDF 457

Query: 253 VASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           V+ IL     + +  L DK L++IS N L+MHD++Q+MG  IV QE  K+PG RSRLW  
Sbjct: 458 VSRILGPXAKNGIRTLEDKCLITISXNMLDMHDMVQQMGWNIVHQECPKDPGGRSRLW-- 515

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS-NLRLFKFYVPKFYEIEKLP 371
                      G+DA      +    K   L      N+S ++ L K  +P F  +  L 
Sbjct: 516 -----------GSDA------EFVLTKNXLLXKLKVINLSYSVNLIK--IPDFSSVPNLE 556

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF-KPKNLVELNL-RCSKV 429
            ++ E                              L++LPS+F K K L  L+   CSK+
Sbjct: 557 ILTLE--------------------------GCRRLKSLPSSFDKFKCLQSLSCGGCSKL 590

Query: 430 EQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL-HFVCPVTINFSYCVNLIEFP 488
                      P    N   L   +F G  S+   P ++ H      +    C  L+ F 
Sbjct: 591 --------TSFPEINGNMGKLREFNFSGT-SINEVPLSIKHLNGLEELLLEDCKKLVAFS 641

Query: 489 QISG----KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTL 544
           +  G      +    G S ++ +PSSI  L  L+ LDL  C+ L R+  S C L SL TL
Sbjct: 642 ENIGSLSSLKSLKLKGCSKLKGLPSSIXHLKALKNLDLSXCENLVRLPESICSLXSLETL 701

Query: 545 ILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS------- 597
            L GCL  + FP +   M +L+ +  D T I E+PSS  +L  LE L +   S       
Sbjct: 702 FLNGCLKFKGFPGVKGHMNNLRVLRLDSTAIKEIPSSITHLKALEYLNLSRSSIDGVVLD 761

Query: 598 ---------------KLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSH 642
                           +  +P++I  L  L  +    +  S +P+ ++  + L SL+  H
Sbjct: 762 ICHLLSLKELHLSSCNIRGIPNDIFCLSSLEILNLDGNHFSSIPAGISRLSHLTSLNLRH 821

Query: 643 CKGLESFP 650
           C  L+  P
Sbjct: 822 CNKLQQVP 829



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 153/480 (31%), Positives = 209/480 (43%), Gaps = 92/480 (19%)

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            IN SY VNLI+ P  S               VP       +LE+L L GC+RLK + +S
Sbjct: 534 VINLSYSVNLIKIPDFS--------------SVP-------NLEILTLEGCRRLKSLPSS 572

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
           F K + L +L   GC  L  FPEI   M  L+      T I E+P S ++L GLE L +E
Sbjct: 573 FDKFKCLQSLSCGGCSKLTSFPEINGNMGKLREFNFSGTSINEVPLSIKHLNGLEELLLE 632

Query: 595 DCSKLDNLPDNIGSLEYLYYILAAA-SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF 653
           DC KL    +NIGSL  L  +     S +  LPSS+     L++LD S C+ L       
Sbjct: 633 DCKKLVAFSENIGSLSSLKSLKLKGCSKLKGLPSSIXHLKALKNLDLSXCENL------- 685

Query: 654 LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN-NFESLPAIIKQMSQLRFIHLE 712
                           VR +P+ I  L SLE L+L+G   F+  P +   M+ LR + L+
Sbjct: 686 ----------------VR-LPESICSLXSLETLFLNGCLKFKGFPGVKGHMNNLRVLRLD 728

Query: 713 DFNMLQSLPELPLCLKYLHLIDCKMLQSLP----VLPFC----LESLDLTGCNMLRSLPE 764
                 ++ E+P  + +L  ++   L        VL  C    L+ L L+ CN +R +P 
Sbjct: 729 S----TAIKEIPSSITHLKALEYLNLSRSSIDGVVLDICHLLSLKELHLSSCN-IRGIPN 783

Query: 765 LPLCL---QYLNLEDCNMLRSLPELPLCLQLLT---VRNCNRLQSLPEILLCLQELDASV 818
              CL   + LNL D N   S+P     L  LT   +R+CN+LQ +PE+   L+ LD   
Sbjct: 784 DIFCLSSLEILNL-DGNHFSSIPAGISRLSHLTSLNLRHCNKLQQVPELPSSLRLLDV-- 840

Query: 819 LEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLG 878
                 H P       S           NCL       N  + DS  R R       R  
Sbjct: 841 ------HGPS-DGTSSSPSLLPPLHSLVNCL-------NSAIQDSENRSR-------RNW 879

Query: 879 YEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLPPHSSCRN-LIGFAFCAV 936
              + ++      G  IV+PGS  IP W  N+  GS I I LP +    N  +GFA   V
Sbjct: 880 NGASFSDSWYSGNGICIVIPGSSGIPKWIKNKRKGSEIEIGLPQNWHLNNDFLGFALYCV 939



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 158/305 (51%), Gaps = 28/305 (9%)

Query: 442 SSIQNFKYLSALSFKGCQSLRSFPSNL-HFVCPVTINFSYCVNLIEFPQISGKVTRLY-- 498
           SS+ N   L  L+ +GC+ L+S PS+   F C  +++   C  L  FP+I+G + +L   
Sbjct: 550 SSVPN---LEILTLEGCRRLKSLPSSFDKFKCLQSLSCGGCSKLTSFPEINGNMGKLREF 606

Query: 499 -LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPE 557
               ++I EVP SI+ L  LE L L  CK+L   S +   L SL +L L GC  L+  P 
Sbjct: 607 NFSGTSINEVPLSIKHLNGLEELLLEDCKKLVAFSENIGSLSSLKSLKLKGCSKLKGLPS 666

Query: 558 ILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
            +  ++ LK +  S    +  LP S  +L  LE LF+  C K    P   G +  L  + 
Sbjct: 667 SIXHLKALKNLDLSXCENLVRLPESICSLXSLETLFLNGCLKFKGFPGVKGHMNNLRVLR 726

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLE--SFPRTFLLG-------LSAMGLLHISD 667
             ++AI ++PSS+           +H K LE  +  R+ + G       L ++  LH+S 
Sbjct: 727 LDSTAIKEIPSSI-----------THLKALEYLNLSRSSIDGVVLDICHLLSLKELHLSS 775

Query: 668 YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCL 727
             +R IP +I  LSSLEIL L GN+F S+PA I ++S L  ++L   N LQ +PELP  L
Sbjct: 776 CNIRGIPNDIFCLSSLEILNLDGNHFSSIPAGISRLSHLTSLNLRHCNKLQQVPELPSSL 835

Query: 728 KYLHL 732
           + L +
Sbjct: 836 RLLDV 840


>gi|238478956|ref|NP_001154444.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196040|gb|AEE34161.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 988

 Score =  232 bits (592), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 191/652 (29%), Positives = 310/652 (47%), Gaps = 93/652 (14%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V++VGI G  GIGKTT+AKA+  +FS+ F+ +CFV ++RG+  +      LQ+Q LS 
Sbjct: 206 DGVKMVGISGPAGIGKTTIAKALQSRFSNRFQLTCFVDNLRGSYLSGLDELRLQEQFLSN 265

Query: 65  TLSEKLEVAGPNIPH--FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
            L++     G  I H    +ER+ ++++LI+LDDV+ + QL+ L  +   FG  SRIVVT
Sbjct: 266 VLNQD----GIRINHSGVIEERLCKLRVLIILDDVDHIKQLEALANKTTWFGPRSRIVVT 321

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           T +K +L+    +E K Y   G +                       W +  V       
Sbjct: 322 TENKELLQ----QEWKSYPQKGFQ-----------------------WLALRVTQLCGKL 354

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L ++GSSL  K +  W +V+  L    +    DI ++L++ +  L    K++FL IA
Sbjct: 355 PLGLCMVGSSLRGKNEEGWEEVICSLENNID---RDIEEVLRVGYESLDDNEKTLFLHIA 411

Query: 243 CFFEGEDKDFVASILDDSESD---VLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQE 298
            FF  +    V  +  D + D    L IL ++SL+ IS  + + MH +LQ++G++ ++++
Sbjct: 412 IFFNNQYVHLVERLFADGDLDFKRALKILENRSLIEISFSSRIVMHRLLQQVGKKAIQKQ 471

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
              EP KR  L D +EI  VL+++  T  +  I  D+S I  + +   AF  MSNLR   
Sbjct: 472 ---EPLKRQILMDAREICYVLENDTDTRYVSAILFDISGIDEVYIREGAFRRMSNLRFLT 528

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
            Y  K                    + +P  +++ P++LR L W+ YP +  P  F P+ 
Sbjct: 529 VYKSK--------------DDGNDIMDIPKRMEF-PRRLRILKWEAYPNKCFPPKFHPEY 573

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
           LVEL ++ SK+E  W+G         Q  K L  ++ KG  +L++ P+  +      +  
Sbjct: 574 LVELVMKNSKLEYLWQG--------TQPLKNLKEMNLKGSSNLKALPNLSNATKMEILKL 625

Query: 479 SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
           S C +L+                    E+PSS   L  LE L LRGC  L+ I      L
Sbjct: 626 SDCKSLV--------------------EIPSSFSHLQRLEKLRLRGCISLEVIPADM-NL 664

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
             L  L + GC  L + P +  ++  L    +    ++   +S+ ++  L +        
Sbjct: 665 EFLYDLDMRGCSRLRNIPVMSTRLYFLNISETAVEDVSASITSWHHVTHLSINSSAKLRG 724

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           L +LP  +  L+  Y      S I ++P+ +    +L+SL  S C+ L S P
Sbjct: 725 LTHLPRPVEFLDLSY------SGIERIPNCIKDRYLLKSLTISGCRRLTSLP 770



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 110/248 (44%), Gaps = 53/248 (21%)

Query: 538 LRSLVTLILLGCLNLEHFPEI--LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
           L++L  + L G  NL+  P +    KME LK   SD   + E+PSSF +L  LE L +  
Sbjct: 594 LKNLKEMNLKGSSNLKALPNLSNATKMEILK--LSDCKSLVEIPSSFSHLQRLEKLRLRG 651

Query: 596 CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
           C  L+ +P ++ +LE+LY                        LD   C  L + P    +
Sbjct: 652 CISLEVIPADM-NLEFLY-----------------------DLDMRGCSRLRNIP----V 683

Query: 656 GLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN 715
             + +  L+IS+ AV ++   I   S   + +LS N+   L  +      + F+ L    
Sbjct: 684 MSTRLYFLNISETAVEDVSASIT--SWHHVTHLSINSSAKLRGLTHLPRPVEFLDLS--- 738

Query: 716 MLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLE 775
               +  +P C+K  +L               L+SL ++GC  L SLPELP  L++L  +
Sbjct: 739 -YSGIERIPNCIKDRYL---------------LKSLTISGCRRLTSLPELPASLKFLVAD 782

Query: 776 DCNMLRSL 783
           DC  L ++
Sbjct: 783 DCESLETV 790



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 139/329 (42%), Gaps = 64/329 (19%)

Query: 610 EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD-Y 668
           EYL  ++   S +  L         L+ ++      L++ P   L   + M +L +SD  
Sbjct: 572 EYLVELVMKNSKLEYLWQGTQPLKNLKEMNLKGSSNLKALPN--LSNATKMEILKLSDCK 629

Query: 669 AVREIPQEIAYLSSLEILYLSGN-NFESLPAIIKQMSQLRFIHLEDFNM-----LQSLPE 722
           ++ EIP   ++L  LE L L G  + E +PA +     L F++  D +M     L+++P 
Sbjct: 630 SLVEIPSSFSHLQRLEKLRLRGCISLEVIPADM----NLEFLY--DLDMRGCSRLRNIPV 683

Query: 723 LPLCLKYLHLIDCKMLQ-SLPVLPFC-LESLDLTGCNMLRSLPELPLCLQYLNLEDCNML 780
           +   L +L++ +  +   S  +  +  +  L +     LR L  LP  +++L+L    + 
Sbjct: 684 MSTRLYFLNISETAVEDVSASITSWHHVTHLSINSSAKLRGLTHLPRPVEFLDLSYSGIE 743

Query: 781 RSLPELPLC------LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPE 834
           R    +P C      L+ LT+  C RL SLPE+   L+ L A   E L     +  + P 
Sbjct: 744 R----IPNCIKDRYLLKSLTISGCRRLTSLPELPASLKFLVADDCESL-----ETVFCP- 793

Query: 835 SLKSAAI----CFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSEL 890
             K++       FEFTNC KL+ +A   I+                              
Sbjct: 794 -FKTSKCWPFNIFEFTNCFKLDQEARRAIIQRPFFH------------------------ 828

Query: 891 RGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
                +LPG E+P  F ++  G+++ I L
Sbjct: 829 --GTTLLPGREVPAEFDHRGRGNTLTIPL 855


>gi|356514963|ref|XP_003526171.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1055

 Score =  232 bits (591), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 221/739 (29%), Positives = 338/739 (45%), Gaps = 160/739 (21%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           ++S   V++VGI GMGGIGKTTLA+A++++ + +++  CFV DV      +  L  +QKQ
Sbjct: 224 LESVSDVRVVGISGMGGIGKTTLARALYEKIADQYDFHCFVDDVNNIYRHSSSLG-VQKQ 282

Query: 61  MLSTTLS-EKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQF----- 113
           +LS  L+ E LE+   +   +     +R  + LIVLD+V +V QL       +       
Sbjct: 283 LLSQCLNDENLEICNVSKGTYLVSTMLRNKRGLIVLDNVGQVEQLHMFTQSRETLLRECL 342

Query: 114 GQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSR 173
           G GSRI++T+RD+ +L         +Y+V  L ++ A + FC  AFK  +   D    + 
Sbjct: 343 GGGSRIIITSRDEHILRTHGVNH--VYQVQPLSWDNAVKLFCINAFKCTYIMSDYEMLTH 400

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            V+S+ +G+PL +EV+G SL  +  S W   L   +R+ +++  +I D+L+IS++ L  +
Sbjct: 401 GVLSHAQGHPLAIEVIGKSLFGRNVSQWTSTL---DRLRDNKSRNIMDVLRISYDDLEEK 457

Query: 234 VKSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEM 290
            + IFLDIACFF  + +  V  IL+    D    L IL++KSL++IS   ++MHD+L+++
Sbjct: 458 DREIFLDIACFFNDDHEQHVKEILNFRGFDPEIGLPILVEKSLITISDGLIHMHDLLRDL 517

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
           G+ IVR++S KEP K SRLWD ++I +V+  N     +    LD+S  K +         
Sbjct: 518 GKCIVREKSPKEPRKWSRLWDFEDIYKVMSDNMPLPNLR--LLDVSNCKNL--------- 566

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
                     VP F E   L S++    +                +LR LH     LR  
Sbjct: 567 --------IEVPNFGEAPNLASLNLCGCI----------------RLRQLHSSIGLLR-- 600

Query: 411 PSNFKPKNLVELNLR-CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSF-PSNL 468
                   L  LNL+ C  +          +P  +Q    L  L+ +GC  LR   PS  
Sbjct: 601 -------KLTILNLKECRSLTD--------LPHFVQGLN-LEELNLEGCVQLRQIHPSIG 644

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
           H      +N   C++L+                     +P++I  L  LE L L GC +L
Sbjct: 645 HLRKLTVLNLKDCISLV--------------------SIPNTILGLNSLECLSLSGCSKL 684

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTP-ITELPSSF--ENL 585
             I                      H  E L    +LK++     P  ++   SF  + L
Sbjct: 685 YNI----------------------HLSEELRDARYLKKLRMGEAPSCSQSIFSFLKKWL 722

Query: 586 PGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKG 645
           P   + F  D S  D   D++  L               LPS   LS M R LD S C  
Sbjct: 723 PWPSMAF--DKSLEDAHKDSVRCL---------------LPSLPILSCM-RELDLSFCNL 764

Query: 646 LESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQ 705
           L                         +IP     L  LE L L GNNFE+LP+ +K++S+
Sbjct: 765 L-------------------------KIPDAFGNLHCLEKLCLRGNNFETLPS-LKELSK 798

Query: 706 LRFIHLEDFNMLQSLPELP 724
           L  ++L+    L+ LPELP
Sbjct: 799 LLHLNLQHCKRLKYLPELP 817



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 133/536 (24%), Positives = 214/536 (39%), Gaps = 112/536 (20%)

Query: 481 CVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRS 540
           C+   + P+   K +RL+  +  I +V S    L +L +LD+  CK L  +  +F +  +
Sbjct: 520 CIVREKSPKEPRKWSRLWDFED-IYKVMSDNMPLPNLRLLDVSNCKNLIEVP-NFGEAPN 577

Query: 541 LVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD 600
           L +L L GC+ L                        +L SS   L  L +L +++C  L 
Sbjct: 578 LASLNLCGCIRLR-----------------------QLHSSIGLLRKLTILNLKECRSLT 614

Query: 601 NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAM 660
           +LP  +  L      L     + Q+  S+     L  L+   C  L S P T +LGL+++
Sbjct: 615 DLPHFVQGLNLEELNLEGCVQLRQIHPSIGHLRKLTVLNLKDCISLVSIPNT-ILGLNSL 673

Query: 661 GLLHIS------DYAVREIPQEIAYLSSL---EILYLSGNNFESLPAIIKQMSQLRFIHL 711
             L +S      +  + E  ++  YL  L   E    S + F  L   +   S      L
Sbjct: 674 ECLSLSGCSKLYNIHLSEELRDARYLKKLRMGEAPSCSQSIFSFLKKWLPWPSMAFDKSL 733

Query: 712 EDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPEL------ 765
           ED               +   + C +L SLP+L  C+  LDL+ CN+L+ +P+       
Sbjct: 734 ED--------------AHKDSVRC-LLPSLPILS-CMRELDLSFCNLLK-IPDAFGNLHC 776

Query: 766 --PLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLS 823
              LCL+  N E    L SL EL   L L  +++C RL+ LPE+         S  +  S
Sbjct: 777 LEKLCLRGNNFE---TLPSLKELSKLLHL-NLQHCKRLKYLPEL--------PSRTDVPS 824

Query: 824 KHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAI 883
             S  L+W     +   +     NC +L               +      S+ L + M +
Sbjct: 825 PSSNKLRWTSVENEEIVLGLNIFNCPEL---------------VERDCCTSMCLSWMMQM 869

Query: 884 NEKLSELRGSLIV------LPGSEIPDWFSNQSSGSSICIQLPPHSS-----CRNLIGFA 932
            +  S+ +    +      +PGS+IP WF  Q  G    I++   S        N IG A
Sbjct: 870 VQAFSKPKSPWWIPFISSIIPGSKIPRWFDEQHLGMGNVIKIEHASDHFMQHHNNWIGIA 929

Query: 933 FCAVL------------DSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSR 976
            C+V+            +S   +SD    FY+   F  ++ T  E+ H+ L Y +R
Sbjct: 930 -CSVIFVPHKERTMRHPESFTDESDERPCFYIPLLFRKDLVT-DESDHMLLFYYTR 983


>gi|238478954|ref|NP_001154443.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196039|gb|AEE34160.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1004

 Score =  232 bits (591), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 191/652 (29%), Positives = 310/652 (47%), Gaps = 93/652 (14%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D V++VGI G  GIGKTT+AKA+  +FS+ F+ +CFV ++RG+  +      LQ+Q LS 
Sbjct: 206 DGVKMVGISGPAGIGKTTIAKALQSRFSNRFQLTCFVDNLRGSYLSGLDELRLQEQFLSN 265

Query: 65  TLSEKLEVAGPNIPH--FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
            L++     G  I H    +ER+ ++++LI+LDDV+ + QL+ L  +   FG  SRIVVT
Sbjct: 266 VLNQD----GIRINHSGVIEERLCKLRVLIILDDVDHIKQLEALANKTTWFGPRSRIVVT 321

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           T +K +L+    +E K Y   G +                       W +  V       
Sbjct: 322 TENKELLQ----QEWKSYPQKGFQ-----------------------WLALRVTQLCGKL 354

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L ++GSSL  K +  W +V+  L    +    DI ++L++ +  L    K++FL IA
Sbjct: 355 PLGLCMVGSSLRGKNEEGWEEVICSLENNID---RDIEEVLRVGYESLDDNEKTLFLHIA 411

Query: 243 CFFEGEDKDFVASILDDSESD---VLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQE 298
            FF  +    V  +  D + D    L IL ++SL+ IS  + + MH +LQ++G++ ++++
Sbjct: 412 IFFNNQYVHLVERLFADGDLDFKRALKILENRSLIEISFSSRIVMHRLLQQVGKKAIQKQ 471

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
              EP KR  L D +EI  VL+++  T  +  I  D+S I  + +   AF  MSNLR   
Sbjct: 472 ---EPLKRQILMDAREICYVLENDTDTRYVSAILFDISGIDEVYIREGAFRRMSNLRFLT 528

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
            Y  K                    + +P  +++ P++LR L W+ YP +  P  F P+ 
Sbjct: 529 VYKSK--------------DDGNDIMDIPKRMEF-PRRLRILKWEAYPNKCFPPKFHPEY 573

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
           LVEL ++ SK+E  W+G         Q  K L  ++ KG  +L++ P+  +      +  
Sbjct: 574 LVELVMKNSKLEYLWQG--------TQPLKNLKEMNLKGSSNLKALPNLSNATKMEILKL 625

Query: 479 SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKL 538
           S C +L+                    E+PSS   L  LE L LRGC  L+ I      L
Sbjct: 626 SDCKSLV--------------------EIPSSFSHLQRLEKLRLRGCISLEVIPADM-NL 664

Query: 539 RSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
             L  L + GC  L + P +  ++  L    +    ++   +S+ ++  L +        
Sbjct: 665 EFLYDLDMRGCSRLRNIPVMSTRLYFLNISETAVEDVSASITSWHHVTHLSINSSAKLRG 724

Query: 599 LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           L +LP  +  L+  Y      S I ++P+ +    +L+SL  S C+ L S P
Sbjct: 725 LTHLPRPVEFLDLSY------SGIERIPNCIKDRYLLKSLTISGCRRLTSLP 770



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 110/248 (44%), Gaps = 53/248 (21%)

Query: 538 LRSLVTLILLGCLNLEHFPEI--LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
           L++L  + L G  NL+  P +    KME LK   SD   + E+PSSF +L  LE L +  
Sbjct: 594 LKNLKEMNLKGSSNLKALPNLSNATKMEILK--LSDCKSLVEIPSSFSHLQRLEKLRLRG 651

Query: 596 CSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLL 655
           C  L+ +P ++ +LE+LY                        LD   C  L + P    +
Sbjct: 652 CISLEVIPADM-NLEFLY-----------------------DLDMRGCSRLRNIP----V 683

Query: 656 GLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFN 715
             + +  L+IS+ AV ++   I   S   + +LS N+   L  +      + F+ L    
Sbjct: 684 MSTRLYFLNISETAVEDVSASIT--SWHHVTHLSINSSAKLRGLTHLPRPVEFLDLS--- 738

Query: 716 MLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLE 775
               +  +P C+K  +L               L+SL ++GC  L SLPELP  L++L  +
Sbjct: 739 -YSGIERIPNCIKDRYL---------------LKSLTISGCRRLTSLPELPASLKFLVAD 782

Query: 776 DCNMLRSL 783
           DC  L ++
Sbjct: 783 DCESLETV 790



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 139/329 (42%), Gaps = 64/329 (19%)

Query: 610 EYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD-Y 668
           EYL  ++   S +  L         L+ ++      L++ P   L   + M +L +SD  
Sbjct: 572 EYLVELVMKNSKLEYLWQGTQPLKNLKEMNLKGSSNLKALPN--LSNATKMEILKLSDCK 629

Query: 669 AVREIPQEIAYLSSLEILYLSGN-NFESLPAIIKQMSQLRFIHLEDFNM-----LQSLPE 722
           ++ EIP   ++L  LE L L G  + E +PA +     L F++  D +M     L+++P 
Sbjct: 630 SLVEIPSSFSHLQRLEKLRLRGCISLEVIPADM----NLEFLY--DLDMRGCSRLRNIPV 683

Query: 723 LPLCLKYLHLIDCKMLQ-SLPVLPFC-LESLDLTGCNMLRSLPELPLCLQYLNLEDCNML 780
           +   L +L++ +  +   S  +  +  +  L +     LR L  LP  +++L+L    + 
Sbjct: 684 MSTRLYFLNISETAVEDVSASITSWHHVTHLSINSSAKLRGLTHLPRPVEFLDLSYSGIE 743

Query: 781 RSLPELPLC------LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPE 834
           R    +P C      L+ LT+  C RL SLPE+   L+ L A   E L     +  + P 
Sbjct: 744 R----IPNCIKDRYLLKSLTISGCRRLTSLPELPASLKFLVADDCESL-----ETVFCP- 793

Query: 835 SLKSAAI----CFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSEL 890
             K++       FEFTNC KL+ +A   I+                              
Sbjct: 794 -FKTSKCWPFNIFEFTNCFKLDQEARRAIIQRPFFH------------------------ 828

Query: 891 RGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
                +LPG E+P  F ++  G+++ I L
Sbjct: 829 --GTTLLPGREVPAEFDHRGRGNTLTIPL 855


>gi|147828745|emb|CAN72925.1| hypothetical protein VITISV_027143 [Vitis vinifera]
          Length = 726

 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 186/539 (34%), Positives = 272/539 (50%), Gaps = 60/539 (11%)

Query: 100 VGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAF 159
           +GQL+ L+G    +G+GSRI++TTRDKR L     +   +Y V  L   EA E F  +AF
Sbjct: 1   MGQLEFLVGNQTWYGKGSRIIITTRDKRCLTMLNVD--YLYEVEELNSNEALELFSQYAF 58

Query: 160 KENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDI 219
           + N   +D    S   V Y +G PL L VLGS L  K    W   LH L +  E EI   
Sbjct: 59  RSNLPKDDFENLSHQAVQYCEGLPLALRVLGSFLYGKTIREWESELHKLEKEPEVEIQ-- 116

Query: 220 YDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSI 276
            ++LKISF+ L    + I LDIACFF+GEDKDF + I D  E  S++ + +L ++ L++I
Sbjct: 117 -NVLKISFDGLDITQQMILLDIACFFQGEDKDFASKIWDGYELYSEINIKVLTERCLITI 175

Query: 277 SGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLS 336
           S N L+MH ++++M ++IV QE  K+P K SRLW+P +I    +  +G + +E I LDLS
Sbjct: 176 SNNRLHMHGLIEKMCKKIV-QEHPKDPSKWSRLWNPDDICCKFESEEGMENVETISLDLS 234

Query: 337 K-------IKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNG 389
           +        K      + F  M  LRL K Y           S+  E ++S     LP  
Sbjct: 235 RSKENWFTTKIFAQMKKVFAKMKKLRLLKVYY----------SLGDEXKMS-----LPKD 279

Query: 390 LDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVP-----SSI 444
            ++ P  L YLHW+      L ++ +   + + + R  K+E+     + CV      SSI
Sbjct: 280 FEF-PPNLNYLHWEELKFIDLSNSQQLIKIPKFS-RMPKLEKL--NLEGCVSFNKLHSSI 335

Query: 445 QNF---KYLSALSFKGCQSLRSFPSNL-HFVCPVTINFSYCVNLIEFPQISGKVTRLYLG 500
             F   K+   L+F     +  FPS++   +   T+N S C    +FP I       ++ 
Sbjct: 336 GTFSEMKFFRELNFSE-SGIGEFPSSIGSLISLETLNLSKCSKFEKFPDI------FFVN 388

Query: 501 QSAIEEVP-SSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
              ++ +  S       L  L LR CK L+ + ++  +L SL    L  C NLE FPEI+
Sbjct: 389 MRHLKTLRLSDSGHFPRLLYLHLRKCKNLRSVPSNILQLESLQICYLNDCSNLEIFPEIM 448

Query: 560 E--KMEHLKRIYSDRTPITE------LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
           E  K   L++ Y  R  ++       LPSS  NL GL  L V +C KL  LPDN+ S++
Sbjct: 449 EHSKGLSLRQKYLGRLELSNCENLETLPSSIGNLTGLHALLVRNCPKLHKLPDNLRSMQ 507



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 123/283 (43%), Gaps = 40/283 (14%)

Query: 527 RLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSS----- 581
           ++K++     KLR L     LG       P+  E   +L  ++ +     +L +S     
Sbjct: 248 QMKKVFAKMKKLRLLKVYYSLGDEXKMSLPKDFEFPPNLNYLHWEELKFIDLSNSQQLIK 307

Query: 582 ---FENLPGLEVLFVEDCSKLDNLPDNIGS---LEYLYYILAAASAISQLPSSVALSNML 635
              F  +P LE L +E C   + L  +IG+   +++   +  + S I + PSS+     L
Sbjct: 308 IPKFSRMPKLEKLNLEGCVSFNKLHSSIGTFSEMKFFRELNFSESGIGEFPSSIGSLISL 367

Query: 636 RSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA---------------VREIPQEIAYL 680
            +L+ S C   E FP  F + +  +  L +SD                 +R +P  I  L
Sbjct: 368 ETLNLSKCSKFEKFPDIFFVNMRHLKTLRLSDSGHFPRLLYLHLRKCKNLRSVPSNILQL 427

Query: 681 SSLEILYLSG-NNFESLPAIIKQMSQLRF-------IHLEDFNMLQSLPELPLCLKYLHL 732
            SL+I YL+  +N E  P I++    L         + L +   L++LP     L  LH 
Sbjct: 428 ESLQICYLNDCSNLEIFPEIMEHSKGLSLRQKYLGRLELSNCENLETLPSSIGNLTGLHA 487

Query: 733 I---DCKMLQSLP--VLPFCLESLDLTGCNMLR-SLPELPLCL 769
           +   +C  L  LP  +    LE LD++GCN++  ++P+   CL
Sbjct: 488 LLVRNCPKLHKLPDNLRSMQLEELDVSGCNLMAGAIPDDLWCL 530



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 161/405 (39%), Gaps = 91/405 (22%)

Query: 559 LEKMEHLKRIYS--DRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
           ++K+  LK  YS  D   ++ LP  FE  P L  L  E+   +D               L
Sbjct: 256 MKKLRLLKVYYSLGDEXKMS-LPKDFEFPPNLNYLHWEELKFID---------------L 299

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR--TFLLGLSAMGL---LHISDYAVR 671
           + +  + ++P     S M + L+  + +G  SF +  + +   S M     L+ S+  + 
Sbjct: 300 SNSQQLIKIP---KFSRMPK-LEKLNLEGCVSFNKLHSSIGTFSEMKFFRELNFSESGIG 355

Query: 672 EIPQEIAYLSSLEILYLSG-NNFESLPAII-KQMSQLRFIHLEDFNMLQSLPELPLCLKY 729
           E P  I  L SLE L LS  + FE  P I    M  L+ + L D      L        Y
Sbjct: 356 EFPSSIGSLISLETLNLSKCSKFEKFPDIFFVNMRHLKTLRLSDSGHFPRL-------LY 408

Query: 730 LHLIDCKMLQSLPVLPFCLESLD---LTGCNMLRSLPE-------LPLCLQYLN---LED 776
           LHL  CK L+S+P     LESL    L  C+ L   PE       L L  +YL    L +
Sbjct: 409 LHLRKCKNLRSVPSNILQLESLQICYLNDCSNLEIFPEIMEHSKGLSLRQKYLGRLELSN 468

Query: 777 CNMLRSLPELP---LCLQLLTVRNCNRLQSLPEIL--LCLQELDASVLEKLSKHSPDLQW 831
           C  L +LP        L  L VRNC +L  LP+ L  + L+ELD S    ++   PD  W
Sbjct: 469 CENLETLPSSIGNLTGLHALLVRNCPKLHKLPDNLRSMQLEELDVSGCNLMAGAIPDDLW 528

Query: 832 APESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELR 891
              SL+S    FE+                                       E   +  
Sbjct: 529 CLFSLQSLNEYFEWATYW-----------------------------------EDSEDYH 553

Query: 892 GSLIVLPGSEIPDWFSNQSSGSSICIQLPPH-SSCRNLIGFA-FC 934
             +I+L    IP W S++S G  I I LP +     N +GFA FC
Sbjct: 554 VHVIILGRRGIPXWISHKSMGDEITIDLPKNWYEDNNFLGFALFC 598


>gi|2245047|emb|CAB10466.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1038

 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 209/732 (28%), Positives = 339/732 (46%), Gaps = 103/732 (14%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S   ++VGIWG  GIGK+T+ KA++ Q   +F    FV  V             ++  LS
Sbjct: 202 SKEARMVGIWGPSGIGKSTIGKALYSQLFCQFHFHAFVPHVYSMKS------EWEEIFLS 255

Query: 64  TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
             L + +++ G       ++ + + K+LIVLDDV++   LK L+GE   FG GSRI+V T
Sbjct: 256 KILGKDIKIGGK--LGVVEQMLNQKKVLIVLDDVDDPEFLKTLVGETKWFGPGSRIIVIT 313

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           +D ++L+    +   +Y V     + A +  C  AF EN  P+D    +  V       P
Sbjct: 314 QDMQLLKAH--DIDLLYEVKFPSLDLALKMLCRSAFGENSPPDDFKALAFEVAVLAGNLP 371

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L L VLGSSL  + K  W +++    R       DI   L++S+++L  + + +FL IAC
Sbjct: 372 LGLSVLGSSLKRRTKEEWMEMMP---RFRNGLNGDIMKTLRVSYDRLHQKDQDMFLYIAC 428

Query: 244 FFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNF-LNMHDILQEMGRQIVRQESEKE 302
            F G +  +V  +L+D+    + +L++KSL+ I+ +  + MH++L+++G +I R +S+  
Sbjct: 429 LFNGFEVSYVNDLLEDNVG--VTMLVEKSLIRITPDGDIEMHNLLEKLGIEIDRAKSKGN 486

Query: 303 PGKRSRLWDPKEISRVLKHNKGTDAIEGI-FLDLSKIKGI-NLDPRAFTNMSNLRLFKFY 360
           PGKR  L D ++  R          + GI F    + K +  +D ++F  M NL+     
Sbjct: 487 PGKRRFLTDFEDTLR--------KTVLGIRFCTAFRSKELLPIDEKSFQGMRNLQCL--- 535

Query: 361 VPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLV 420
                             ++   + LP  L YLP KLR L WD  PL+ LP +FK   L+
Sbjct: 536 -----------------SVTGDYMDLPQSLVYLPPKLRLLDWDRCPLKCLPYSFKADYLI 578

Query: 421 ELNLRCSKVEQPWEGEK---------------------------------------ACVP 441
           +L +  SK+E+ WEG                                           + 
Sbjct: 579 QLTMMGSKLEKLWEGTVPLGSLKRMNMHGSRYLREISDLSNARNLEELNLSECRSLVTLS 638

Query: 442 SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ 501
           SSIQN   L  L  +GC  L SFP++L+      +   Y  NL  FP     V ++    
Sbjct: 639 SSIQNAIKLIYLDMRGCTKLESFPTHLNLESLEYLGLLYYDNLRNFP-----VFKMETST 693

Query: 502 SAIEEVPSSIE-CL--TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
           ++   +   +E C+   +L  LD   C  L R      +   LV LI+ G   LE   E 
Sbjct: 694 TSPHGIEIRVENCIWNKNLPGLDYLAC--LVRCMPCEFRPNDLVRLIVRGNQMLEKLWEG 751

Query: 559 LEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-L 616
           ++ +  L  +  S+   +TE+P        L  L++ +C  L  +P  IG+L+ L  + +
Sbjct: 752 VQSLASLVEMDMSECGNLTEIP-DLSKATNLVNLYLSNCKSLVTVPSTIGNLQKLVRLEM 810

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE 676
              + +  LP+ V LS+ L+ LD S C  L +FP    L   ++  L++ + A+ E+P  
Sbjct: 811 KECTGLEVLPTDVNLSS-LKMLDLSGCSSLRTFP----LISKSIKWLYLENTAIEEVPCC 865

Query: 677 IAYLSSLEILYL 688
           I   S L +L +
Sbjct: 866 IENFSWLTVLMM 877



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 84/193 (43%), Gaps = 50/193 (25%)

Query: 389 GLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKV-EQPWEGEKA--------- 438
           GLDYL             +R +P  F+P +LV L +R +++ E+ WEG ++         
Sbjct: 714 GLDYL----------ACLVRCMPCEFRPNDLVRLIVRGNQMLEKLWEGVQSLASLVEMDM 763

Query: 439 ------------------------------CVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
                                          VPS+I N + L  L  K C  L   P+++
Sbjct: 764 SECGNLTEIPDLSKATNLVNLYLSNCKSLVTVPSTIGNLQKLVRLEMKECTGLEVLPTDV 823

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
           +      ++ S C +L  FP IS  +  LYL  +AIEEVP  IE  + L VL +  CKRL
Sbjct: 824 NLSSLKMLDLSGCSSLRTFPLISKSIKWLYLENTAIEEVPCCIENFSWLTVLMMYCCKRL 883

Query: 529 KRISTSFCKLRSL 541
           K IS +  +L  L
Sbjct: 884 KNISPNIFRLTIL 896


>gi|13509217|emb|CAC35328.1| N1-B protein [Linum usitatissimum]
          Length = 1108

 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 250/885 (28%), Positives = 392/885 (44%), Gaps = 145/885 (16%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +D S + +I+GI+GMGG+GKTTLAKA+F+Q S +FE  CF+ ++R       G+  LQ +
Sbjct: 227  LDHSTSERIIGIYGMGGLGKTTLAKAVFNQVSMQFERCCFLDNIRETLLRNDGVVALQNK 286

Query: 61   MLSTTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            ++S  L +  + A    +     +ERVRR K+ +VLDD++E      + G+L  F   SR
Sbjct: 287  VISDILRKDSDQAKNASDGVRIIRERVRRHKIFVVLDDIDESFHFDEIFGKLGDFSTDSR 346

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
             ++TTRD R LE     E K++ +  +  + + + F   AF  ++ PED        +  
Sbjct: 347  FLITTRDARTLELL--NECKMFGLEEMSHDHSLQLFSKHAFGVDYPPEDYASLCEEFIQV 404

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL L+V+GS L    K  W   L +L  I  +++    + LK+S+N+LT   K IF
Sbjct: 405  ASGLPLALKVIGSLLFKSDKRFWEDKLIELKAIPSAKVQ---ERLKVSYNELTHNEKQIF 461

Query: 239  LDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGN-FLNMHDILQEMGRQI 294
            LDIAC F G  K+    +  D +   +  L  L+ +SLV +  N    MHD ++++GR I
Sbjct: 462  LDIACLFVGAKKEVPMYMWSDCDLYPASTLRTLVQRSLVRMDDNKIFWMHDHIRDLGRTI 521

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            VR+E+ + P KRSR+W   +   +LK+ +G D +E + +D+ K +G  L  + F   S L
Sbjct: 522  VREENSQNPYKRSRIWSNNDAIDILKNREGNDCVEALRVDM-KGEGYALTNKEFNQFSRL 580

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            R        F E+     ++ +   ++  + LPN        LR+L    Y     PS  
Sbjct: 581  R--------FLEV-----LNGDLSGNFKNI-LPN--------LRWLR--VYRGDPSPSGL 616

Query: 415  KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS-----NLH 469
                LV L L    V   W+G      + I+    L  ++   C  L   P       L 
Sbjct: 617  NLNKLVILELDGCYVTHSWKGW-----NEIKAAGKLKVVNLTSCGILEKVPDLSTCRGLE 671

Query: 470  FVCPVTINFSYC-------------------VNLIEFPQISGKV------TRLYLGQSAI 504
             +C     F  C                   +N  E   I G+V       +L +G+S +
Sbjct: 672  LLC-----FHKCQWMRGELDIGTFKDLKVLDINQTEITTIKGEVESLQNLQQLDVGRSGL 726

Query: 505  EEVPSSIECLTDLEVLDL------------RGCKRLKRISTSFCKL-RSLVTLILLGCLN 551
             EVP+ I  L+ LE LDL             G K L   S S   L  SL+ L +    N
Sbjct: 727  IEVPAGISKLSSLEFLDLTSVKHDEVEMLPNGLKLLVISSFSLSALPSSLIKLDICDSRN 786

Query: 552  LEHFPEILEKMEHLKRIYSDRTPITELPS----------------SFENLPGLEVLF--- 592
            L+  P  L  + +L R++     I E+P                 + +NL GLE L    
Sbjct: 787  LQRLPN-LASVTNLTRLHLKEVGIHEIPGLGKLKLLESLSICNAPNLDNLDGLENLVLLK 845

Query: 593  ---VEDCSKLDNLPDNIGSLEYLY-YILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
               +E C  L  LP ++  L  L+  ++     + ++     L + L  LD S C  L  
Sbjct: 846  ELALERCPILGKLP-SLAELTKLHKVVIRWCDVLGEIYGLGNLGDSLSHLDISWCPRLTV 904

Query: 649  FPRTFLLGLSAMGLLHISDYAVREI-PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL- 706
                 L  L  +G L  S + +  I P  ++  + L  L +  +    L   +K +  L 
Sbjct: 905  MD--LLHSLLKLGTLVSSGFELTNILPLSLSIYTKLRTLEVRSSQLPDLTN-LKNLRDLT 961

Query: 707  -----RFIHLEDFNMLQSLPELPL--C-------------LKYLHLIDCKMLQSLPVLPF 746
                   I +   + L+SL EL +  C             LK +H+  C  L  +  L  
Sbjct: 962  ITGCRELIEIAGLHTLESLEELSMERCPSVRKLDLAGLIKLKTIHIHICTRLTEIRGLG- 1020

Query: 747  CLESLD---LTGCNMLRSLPELPLC--LQYLNLEDCNMLRSLPEL 786
             LESL    ++GC  ++ LP L     L+Y +L++C  L+ +  L
Sbjct: 1021 GLESLQMLFMSGCQSIKELPNLSGLKNLKYFSLKECRQLKEVNGL 1065


>gi|356499336|ref|XP_003518497.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 746

 Score =  230 bits (587), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 158/440 (35%), Positives = 249/440 (56%), Gaps = 39/440 (8%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           +TV+++G+WG+ G+GKT LA A+++   + F+ + F+S+VR  S    GLE LQK +LS 
Sbjct: 332 ETVRMLGVWGLPGVGKTELATALYNNIVNHFDAASFLSNVREKSNKINGLEDLQKTLLSE 391

Query: 65  TLSE---KLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
              E    L  A   +    K ++   K+L+VLDDV++  +L++L G  D FG GSRI++
Sbjct: 392 MREELDTDLGCANKGMSEI-KRKLEGKKVLLVLDDVDDKDKLEKLAGGRDWFGSGSRIII 450

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRDK VL     +   IY++  L+   + E FC  AFK++H        S   +   KG
Sbjct: 451 TTRDKDVL--IAHQVDNIYQMEELDKHHSLELFCWNAFKQSHPKTGFEDVSLRAIDVAKG 508

Query: 182 NPLVLEVLGSSLC-LKRKS--HWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
            PL L+V+GS L  L  +S   W   L +  R        I ++LK S+++L  + K +F
Sbjct: 509 LPLALKVIGSDLATLDEESLEDWKCALEEYERTPPER---ILEVLKKSYDRLGSKPKQVF 565

Query: 239 LDIACFFEGEDKDFVASILDD--SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
           LDIACFF+GE K++V ++LD+       + +L++KSL++I    L MHD++Q+MGR IVR
Sbjct: 566 LDIACFFKGEKKEYVENVLDEDFGAKSNIKVLVNKSLLTIEDGCLKMHDLIQDMGRDIVR 625

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
           QE+   PG+ SR+W  +++  +L  + G+D I+GI LD  + + ++ +  AF  M  LR+
Sbjct: 626 QEA-PNPGECSRVWYHEDVIDILTDDLGSDKIQGIMLDPPQREEVDWNGTAFDKMKRLRI 684

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
                     I +  S  +E Q             +LP  LR L W+ YP ++ PS F P
Sbjct: 685 L---------IVRNTSFLSEPQ-------------HLPNHLRVLDWEEYPSKSFPSKFHP 722

Query: 417 KNLVELNLRCSK--VEQPWE 434
           K ++ +NLR S   +E+P++
Sbjct: 723 KKIIVINLRRSHLTLEEPFK 742


>gi|356561381|ref|XP_003548960.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 873

 Score =  230 bits (587), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 232/785 (29%), Positives = 345/785 (43%), Gaps = 176/785 (22%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE---KLEVAGPN 76
           KTT+A+ +++  + +FE  CF+ +VR NS    GL HLQK +LS T+ E   KL      
Sbjct: 223 KTTIAREVYNLIADQFEWLCFLDNVRENS-IKHGLVHLQKTLLSKTIGESSIKLGSVHEG 281

Query: 77  IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
           IP   K R    K+L+V+DDV+++ QL+ ++G  D FG  SR+++TTRDK +L       
Sbjct: 282 IP-IIKHRFLLKKVLLVVDDVDDLDQLQAIVGGTDWFGSASRVIITTRDKHLLTCHG--V 338

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
              Y V+GL  EEA +     AFK +            VV+Y  G PL L V+GS+L  K
Sbjct: 339 TSTYEVDGLNKEEALKLLSGTAFKIDKVDPCYMRILNRVVTYASGLPLALMVIGSNLFGK 398

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
               W   +    RI   +I D+   LK+SF+ L    + IFLDIAC F+G    +V  I
Sbjct: 399 SIEEWESSIDQYERIPNKKIQDV---LKVSFDSLEEDEQQIFLDIACCFKGYALTYVKEI 455

Query: 257 LDDSES----DVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           L    +      + +LIDKSL+ +  + + +HD++++MG++IVRQES +EPGKRSRLW P
Sbjct: 456 LSTHHNFCPEYAIGVLIDKSLIKVDADRVILHDLIEDMGKEIVRQESPREPGKRSRLWFP 515

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIK-GINLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
            +I  VL+ NKG   I+ I LD  K +  +  D  AF  M+NL+         +E     
Sbjct: 516 DDIVEVLEENKGISRIQMITLDYLKYEAAVEWDGVAFKEMNNLKTLIIRSGCLHE----- 570

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
                            G  +LP  LR L W  YP  +LP +F PK LV           
Sbjct: 571 -----------------GPIHLPNSLRVLEWKVYPSPSLPIDFNPKKLV----------- 602

Query: 432 PWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQIS 491
                       I  F Y   +S    +S +                SYC +L  FP++ 
Sbjct: 603 ------------ILKFPYSCLMSLDVLKSKK---------------LSYCHSLESFPEVL 635

Query: 492 GK---VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG 548
           GK   VT L +  + I+E+P SI+ LT           RL+R+              L+ 
Sbjct: 636 GKMENVTSLDIYGTVIKELPFSIQNLT-----------RLRRLE-------------LVR 671

Query: 549 CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGS 608
           C NLE                     I  +P      P LE   V+DCS L +L      
Sbjct: 672 CENLEQ--------------------IRGVP------PNLETFSVKDCSSLKDLD----- 700

Query: 609 LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY 668
                        ++ LPS     ++L+ L     K L++  +   L +  +        
Sbjct: 701 -------------LTLLPSWTKERHLLKELRLHGNKNLQNI-KGIQLSIEVLS------- 739

Query: 669 AVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLK 728
                   + Y +SL+ L L+      LP+  K+   L+ +HL     LQ +  +PL ++
Sbjct: 740 --------VEYCTSLKDLDLT-----LLPSWTKERHLLKELHLHGNKNLQKIKGIPLSIE 786

Query: 729 YLHLIDCKMLQSLPVL--PFC------LESLDLTGCNM-LRSLPELPLCLQYLNLEDCNM 779
            L +  C  L+ + V   P C      L +L    C M L  +  +P  ++  +   C  
Sbjct: 787 VLSVEYCTSLKDVDVTLPPACTQECCILSTLFFDACGMNLHEIHGIPSIIRTCSARGCQY 846

Query: 780 LRSLP 784
             S+P
Sbjct: 847 STSVP 851



 Score = 46.6 bits (109), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 26/214 (12%)

Query: 621 AISQLPSSVALS-NMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
            I + P S  +S ++L+S   S+C  LESFP   L  +  +  L I    ++E+P  I  
Sbjct: 602 VILKFPYSCLMSLDVLKSKKLSYCHSLESFPEV-LGKMENVTSLDIYGTVIKELPFSIQN 660

Query: 680 LSSLEILYL-SGNNFESLPAI--------IKQMSQLRFIHLEDFNMLQSLPELPLCLKYL 730
           L+ L  L L    N E +  +        +K  S L+ +   D  +L S  +    LK L
Sbjct: 661 LTRLRRLELVRCENLEQIRGVPPNLETFSVKDCSSLKDL---DLTLLPSWTKERHLLKEL 717

Query: 731 HLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPL---------CLQYLNLEDCNMLR 781
            L   K LQ++  +   +E L +  C  L+ L +L L          L+ L+L     L+
Sbjct: 718 RLHGNKNLQNIKGIQLSIEVLSVEYCTSLKDL-DLTLLPSWTKERHLLKELHLHGNKNLQ 776

Query: 782 SLPELPLCLQLLTVRNCNRLQSLPEIL--LCLQE 813
            +  +PL +++L+V  C  L+ +   L   C QE
Sbjct: 777 KIKGIPLSIEVLSVEYCTSLKDVDVTLPPACTQE 810


>gi|357474811|ref|XP_003607691.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508746|gb|AES89888.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1050

 Score =  230 bits (586), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 197/629 (31%), Positives = 301/629 (47%), Gaps = 71/629 (11%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIF--DQFSHEFEGSCFVSDVRGNSETAGGLEHLQ 58
           +DS D V  VGI GM G+GKTTLA  ++   + S +F+  CF+ DV       G +   Q
Sbjct: 201 LDSVDKVLAVGICGMSGVGKTTLASVLYCNKKNSPQFDACCFIDDVSKKFRYYGPV-GAQ 259

Query: 59  KQMLSTTLSEK-LEVAGP-NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           KQ+L  TL E+ +++    +  +  + R+ R + LI+ D+V++  QL++L         G
Sbjct: 260 KQILHQTLGEEHIQIYNMYDAANLIQSRLSRCRALIIFDNVDDSEQLEKLAVTRKSLAAG 319

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPED-LNWHSRSV 175
           SRI++  RD  +LE++  +   +Y+V  L    + + FC  AFK ++   D     +  +
Sbjct: 320 SRIIIVCRDAHILEEYGVD--ALYKVPFLNETNSLQLFCRKAFKCDNIKSDSYEEMTYDM 377

Query: 176 VSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           ++Y  G PLV++VL S L  +  S W   L    R+ ES   +I D L+  F  L     
Sbjct: 378 LNYANGLPLVIKVLSSFLYNRSISEWRSALA---RLGESPNKNIMDALQFGFYGLEKTEF 434

Query: 236 SIFLDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISG-NFLNMHDILQEMG 291
            IFLDIACFF G ++ FV ++L+      D+ L +L+DKSL+ IS  N + MH + +E+G
Sbjct: 435 EIFLDIACFFNGREEKFVKNVLNCCGFHPDIGLRVLVDKSLIRISDENKIEMHGVFEELG 494

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
           R+IV++ S K   + S LW  K    V+  N   + +E I L+ ++     L   A +NM
Sbjct: 495 RRIVQENSTKVARQWSILWLHKYCYDVMSENMEKN-VEAIVLNGNERDTEELMVEALSNM 553

Query: 352 SNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP 411
           S LRL                      L    V+    LD L  +LRY+ W+ YP   LP
Sbjct: 554 SRLRL----------------------LILKDVKCLGRLDNLSNQLRYVAWNGYPFMYLP 591

Query: 412 SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKY----LSALSFKGCQSLRSFPSN 467
           SNF+P  LVEL +  S ++Q WEG+K        +  Y    +  L F    +L      
Sbjct: 592 SNFRPNQLVELIMVDSSIKQLWEGKKNLPNLRTLDLSYSTNLIKMLDFGEVPNLER---- 647

Query: 468 LHFVCPVTINFSYCVNLIE---FPQISGKVTRLYLGQ-SAIEEVPSSIECLTDLEVLDLR 523
                   +N   CV L+E   F  +  K+  L L    ++  +P+ I  L  LE L+L 
Sbjct: 648 --------LNLEGCVKLVEMDLFICLPKKLVFLNLKNCRSLISIPNGISGLNSLEYLNLC 699

Query: 524 GCKR----LKRIS----TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPI 575
           GC +    L+ +      S C LR     + +   NL H P  +E +  ++R        
Sbjct: 700 GCSKALNNLRHLEWPSLASLCCLRE----VDISFCNLSHLPGDIEDLSCVERFNLGGNKF 755

Query: 576 TELPSSFENLPGLEVLFVEDCSKLDNLPD 604
             LP  F  L  LE L +E C  L +LP+
Sbjct: 756 VTLP-GFTLLSKLEYLNLEHCLMLTSLPE 783



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 161/385 (41%), Gaps = 72/385 (18%)

Query: 581 SFENLPGLEVLFVEDC---SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLR- 636
           +  N+  L +L ++D     +LDNL +       L Y+         LPS+   + ++  
Sbjct: 549 ALSNMSRLRLLILKDVKCLGRLDNLSNQ------LRYVAWNGYPFMYLPSNFRPNQLVEL 602

Query: 637 -SLDSS---HCKGLESFPRTFLLGLS-AMGLLHISDYAVREIPQEIAYLSSLEILYLSG- 690
             +DSS     +G ++ P    L LS +  L+ + D+   E+P       +LE L L G 
Sbjct: 603 IMVDSSIKQLWEGKKNLPNLRTLDLSYSTNLIKMLDFG--EVP-------NLERLNLEGC 653

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL---CLKYLHLIDC-KMLQSLPVLPF 746
                +   I    +L F++L++   L S+P        L+YL+L  C K L +L  L +
Sbjct: 654 VKLVEMDLFICLPKKLVFLNLKNCRSLISIPNGISGLNSLEYLNLCGCSKALNNLRHLEW 713

Query: 747 -------CLESLDLTGCNMLRSLP---ELPLCLQYLNLEDCNMLRSLPELPLC--LQLLT 794
                  CL  +D++ CN L  LP   E   C++  NL   N   +LP   L   L+ L 
Sbjct: 714 PSLASLCCLREVDISFCN-LSHLPGDIEDLSCVERFNLGG-NKFVTLPGFTLLSKLEYLN 771

Query: 795 VRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGK 854
           + +C  L SLPE+                  SP      E   +    F   NC +L+  
Sbjct: 772 LEHCLMLTSLPEL-----------------PSPAAIKHDEYWSAGMYIF---NCSELD-- 809

Query: 855 ANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSS 914
             N+    S L    M      L + +A  E  +  R   IV+PGSEIP WF+NQ    S
Sbjct: 810 -ENETKRCSRLTFSWM------LQFILANQESSASFRSIEIVIPGSEIPSWFNNQREDGS 862

Query: 915 ICIQLPPHSSCRNLIGFAFCAVLDS 939
           ICI         N+IG A C V  +
Sbjct: 863 ICINPSLIMRDSNVIGIACCVVFSA 887


>gi|357474813|ref|XP_003607692.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508747|gb|AES89889.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1181

 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 216/682 (31%), Positives = 328/682 (48%), Gaps = 89/682 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS D V++VGI GMGGIGKTTLA A++ Q SH+F+  CF+ D+       G +   QKQ
Sbjct: 269 LDSIDDVRVVGICGMGGIGKTTLATALYGQISHQFDARCFIDDLSKIYRHDGQVG-AQKQ 327

Query: 61  MLSTTLS-EKLEVAGPNIPHFTK---ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           +L  TL  E  ++   N+ H T     R+RR+++LI++D+V++VGQL +L    +  G G
Sbjct: 328 ILHQTLGVEPFQLC--NLYHTTDLMRRRLRRLRVLIIVDNVDKVGQLDKLGVNREWLGAG 385

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++ + D+ +L+++  +   +YRV  L +  + + F   AFK  H   D    +  ++
Sbjct: 386 SRIIIISGDEHILKEYGVD--VVYRVPLLNWTNSLQLFSLKAFKLYHIISDYEELTYDIL 443

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           +Y  G PL + VLGSSL  +  S W     +L ++  S   DI D+L++S   L    K 
Sbjct: 444 NYANGLPLAITVLGSSLFSRSISEWRS---ELTKLKVSPHKDIMDVLQLSLIGLMEMEKE 500

Query: 237 IFLDIACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISG-NFLNMHDILQEMGR 292
           IFL IACFF G ++D+V ++L+     +D+ L +L+D SL+ IS  + + MH + + +G+
Sbjct: 501 IFLHIACFFNGREEDYVKNVLNYCGFHADIGLRVLVDNSLIHISDESKIEMHGLFEVLGK 560

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
            IV + S     K SRLW  ++   V+ +N   +    +       KGI L   A + M+
Sbjct: 561 NIVHEISR----KWSRLWLHEQFYNVVSNNMEINVEAVVLYGPGNEKGI-LMAEALSKMN 615

Query: 353 NLRLFKFYVPKF---------------YEIEK-------LPSMSTEEQLSYSKVQLPNGL 390
           +L L      K                +E EK       L  M++ E L   KV++   L
Sbjct: 616 SLELLILKNVKVSGSLNYLSNKLRYLEWEAEKGILMAEALSKMNSLELLILKKVKVSGSL 675

Query: 391 DYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYL 450
           +YL  KLRYL WD YP   LPS+ +   L EL L  S + Q W+ +K  +P+       L
Sbjct: 676 NYLSNKLRYLEWDEYPFLYLPSSSQLDELSELILVGSSITQLWK-DKKYLPN-------L 727

Query: 451 SALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSS 510
             L     ++L + P    F     +N   CV+L+                    ++ SS
Sbjct: 728 RNLDLSCSKNLATMPHFAEFPNLKRLNLEGCVSLV--------------------QINSS 767

Query: 511 IECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYS 570
           I  L +L  L+L+ CK L  I      L SL    + GC N         K       +S
Sbjct: 768 IGLLRELVFLNLKNCKNLICIPNEISGLTSLKYFTICGCSN-------TFKNSKAHGYFS 820

Query: 571 DRTPITELPSSFENLPGLEVLFVEDCS--KLDNLPDNIGSLEYLYYILAAASAISQLPSS 628
                  LPS    LP +  L   D S   L  +PD +GSL +L  +    +    LP S
Sbjct: 821 S----CLLPS----LPSVSCLSEIDISFCNLSQIPDALGSLTWLERLNLRGNNFVTLP-S 871

Query: 629 VALSNMLRSLDSSHCKGLESFP 650
           +   + L  L+  HCK L S P
Sbjct: 872 LRDHSRLEYLNLEHCKQLTSLP 893



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 118/483 (24%), Positives = 202/483 (41%), Gaps = 63/483 (13%)

Query: 489  QISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG 548
            +IS K +RL+L +     V +++E   +  VL   G ++   ++ +  K+ SL  LIL  
Sbjct: 565  EISRKWSRLWLHEQFYNVVSNNMEINVEAVVLYGPGNEKGILMAEALSKMNSLELLILKN 624

Query: 549  CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGS 608
                     +  K+ +L+        + E  S   +L  L +  V+    L+ L + +  
Sbjct: 625  VKVSGSLNYLSNKLRYLEWEAEKGILMAEALSKMNSLELLILKKVKVSGSLNYLSNKLRY 684

Query: 609  LEYLYY----------------ILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRT 652
            LE+  Y                ++   S+I+QL         LR+LD S  K L + P  
Sbjct: 685  LEWDEYPFLYLPSSSQLDELSELILVGSSITQLWKDKKYLPNLRNLDLSCSKNLATMPH- 743

Query: 653  FLLGLSAMGLLHISD-YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL 711
                   +  L++    ++ +I   I  L   E+++L+  N ++L  I  ++S L    L
Sbjct: 744  -FAEFPNLKRLNLEGCVSLVQINSSIGLLR--ELVFLNLKNCKNLICIPNEISGL--TSL 798

Query: 712  EDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQY 771
            + F +            + +   C +L SLP +  CL  +D++ CN L  +P+    L +
Sbjct: 799  KYFTICGCSNTFKNSKAHGYFSSC-LLPSLPSVS-CLSEIDISFCN-LSQIPDALGSLTW 855

Query: 772  L---NLEDCNMLRSLPEL--PLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHS 826
            L   NL   N + +LP L     L+ L + +C +L SLPE+      L A++  K  KH 
Sbjct: 856  LERLNLRGNNFV-TLPSLRDHSRLEYLNLEHCKQLTSLPEL-----PLPAAI--KQDKHK 907

Query: 827  PDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEK 886
                      ++    F   NC +L  +           +  +M + S  + +     + 
Sbjct: 908  ----------RAGMFIF---NCPELGERE----------QCINMTL-SWMIHFIQGKQDS 943

Query: 887  LSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDC 946
             +      IV+PG+EIP WF+N+  G SI I   P     N+IG A CAV   +  D   
Sbjct: 944  SASFHQIDIVIPGTEIPKWFNNRRMGRSISIDPSPIVYDDNIIGIACCAVFSVELFDPTK 1003

Query: 947  FRY 949
             RY
Sbjct: 1004 TRY 1006


>gi|342365842|gb|AEL30375.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 932

 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 204/617 (33%), Positives = 289/617 (46%), Gaps = 97/617 (15%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+ +GIWGMGGI +    K        +      + D  G S TA   E+  + +L  +L
Sbjct: 215 VRYIGIWGMGGIVRERCEKKDIPDIQKQ------LLDQMGISSTALYSEYDGRAILQNSL 268

Query: 67  SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDK 126
             K  +                    VLDDVN   QL+ L GE D FG GSRI++TTRD+
Sbjct: 269 RLKKVLL-------------------VLDDVNHEKQLENLAGEQDWFGSGSRIIITTRDQ 309

Query: 127 RVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVL 186
            +L++    E   Y V GL   EAF  FC+ AFK     E     ++ VV+Y+ G PL L
Sbjct: 310 HLLQEQGVHE--TYEVEGLVEIEAFNLFCSKAFKLPEPTEGFLDLTKEVVNYSGGLPLAL 367

Query: 187 EVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFE 246
           +VLGS L  +    W   +    +I  S   DI D+LKIS++ L    K+IFLDI+CFF+
Sbjct: 368 KVLGSYLYCRSIEVWHSAI---GKIKNSSHSDIIDVLKISYDGLDSMEKNIFLDISCFFK 424

Query: 247 GEDKDFVASILD--DSESDV-LDILIDKSLVSI-----SGNFLNMHDILQEMGRQIVRQE 298
           G  +D+   IL      +++ +DILI++SLV+I       + L MHD+++EMG+ IV QE
Sbjct: 425 GRSRDYATKILKLCGHHAEIGIDILINRSLVTIEQDKYGEDTLKMHDLIEEMGKLIVNQE 484

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
           S  +  KRSRLW   +I  VL+ NK T A   I L   K   +  +  AF+N+  L+L  
Sbjct: 485 SPDDASKRSRLWCEDDIDLVLRQNKETKATRSIVL-YDKRDELYWNDLAFSNICQLKL-- 541

Query: 359 FYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKN 418
                               L    V+ P  L  +P  LR LHW+  P+ TLP   +   
Sbjct: 542 --------------------LILDGVKSPI-LCNIPCTLRVLHWNGCPMETLPFTDEHYE 580

Query: 419 LVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINF 478
           LVE++L  SK+   W G+K      ++  KYL                          N 
Sbjct: 581 LVEIDLYLSKIVHVWHGKKF-----LEKLKYL--------------------------NL 609

Query: 479 SYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLT---DLEVLDLRGCKRLKRISTSF 535
           S   NL + P +SG      L  S   E+    + L    +L  L+L  C  L+ +    
Sbjct: 610 SNSHNLKQTPDLSGAPNLETLDLSCCSELNDIHQSLIHHKNLLELNLIKCGSLQTLGDKL 669

Query: 536 CKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
            ++ SL  L L  C +L   P+  E M+ L  +    T ITELP++  NL GL  L ++ 
Sbjct: 670 -EMSSLKELDLYECNSLRKLPKFGECMKRLSILTLSCTGITELPTTVGNLVGLSELDLQG 728

Query: 596 CSKLDNLPDNIGSLEYL 612
           C +L  LPD I  L+ L
Sbjct: 729 CKRLTCLPDTISGLKSL 745



 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 730 LHLIDCKMLQSL--PVLPFCLESLDLTGCNMLRSLPELPLCLQYLNL--EDCNMLRSLPE 785
           L+LI C  LQ+L   +    L+ LDL  CN LR LP+   C++ L++    C  +  LP 
Sbjct: 654 LNLIKCGSLQTLGDKLEMSSLKELDLYECNSLRKLPKFGECMKRLSILTLSCTGITELPT 713

Query: 786 LP---LCLQLLTVRNCNRLQSLPEILLCLQELDA 816
                + L  L ++ C RL  LP+ +  L+ L A
Sbjct: 714 TVGNLVGLSELDLQGCKRLTCLPDTISGLKSLTA 747


>gi|13509225|emb|CAC35332.1| N2-B protein [Linum usitatissimum]
          Length = 1108

 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 248/885 (28%), Positives = 392/885 (44%), Gaps = 145/885 (16%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +D S + +I+GI+GMGG+GKTTLAKA+F++ S +FE  CF+ ++R       G+  LQ +
Sbjct: 227  LDHSTSERIIGIYGMGGLGKTTLAKAVFNKVSMQFERCCFLDNIRETLLRNDGVVALQNK 286

Query: 61   MLSTTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            ++S  L +  + A    +     +ERVRR K+ +VLDD++E      + G+L  F   SR
Sbjct: 287  VISDILRKDSDQAKNASDGVRIIRERVRRHKIFVVLDDIDESFHFDEIFGKLGDFSTDSR 346

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
             ++TTRD R LE     E K++ +  +  + + + F   AF  ++ PED        +  
Sbjct: 347  FLITTRDARTLELL--NECKMFGLEEMSHDHSLQLFSKHAFGVDYPPEDYASLCEEFIQV 404

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL L+V+GS L    K  W   L +L  I  +++    + LK+S+N+LT   K IF
Sbjct: 405  ASGLPLALKVIGSLLFKSDKRFWEDKLIELKAIPSAKVQ---ERLKVSYNELTHNEKQIF 461

Query: 239  LDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGN-FLNMHDILQEMGRQI 294
            LDIAC F G  K+    +  D +   +  L  L+ +SLV +  N    MHD ++++GR I
Sbjct: 462  LDIACLFVGAKKEVPMYMWSDCDLYPASTLRTLVQRSLVRMDDNKMFWMHDHIRDLGRTI 521

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            VR+E+ + P KRSR+W   +   +LK+ +G D +E + +D+ K +G  L  + F   S L
Sbjct: 522  VREENSQNPYKRSRIWSNNDAIDILKNREGNDCVEALRVDM-KGEGYALTNKEFNQFSRL 580

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            R        F E+     ++ +   ++  + LPN        LR+L    Y     PS  
Sbjct: 581  R--------FLEV-----LNGDLSGNFKNI-LPN--------LRWLR--VYRGDPSPSGL 616

Query: 415  KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS-----NLH 469
                LV L L    V   W+G      + I+    L  ++   C  L   P       L 
Sbjct: 617  NLNKLVILELDGCYVTHSWKGW-----NEIKAAGKLKVVNLTSCGILEKVPDLSTCRGLE 671

Query: 470  FVCPVTINFSYC-------------------VNLIEFPQISGKV------TRLYLGQSAI 504
             +C     F  C                   +N  E   + G+V       +L +G+S +
Sbjct: 672  LLC-----FHKCQWMRGELDIGTFKDLKVLDINQTEITTLKGEVESLQNLQQLDVGRSGL 726

Query: 505  EEVPSSIECLTDLEVLDL------------RGCKRLKRISTSFCKL-RSLVTLILLGCLN 551
             EVP+ I  L+ LE LDL             G K L   S S   L  SL+ L +    N
Sbjct: 727  IEVPAGISKLSSLEFLDLTSVKHDEVEMLPNGLKLLVISSFSLSALPSSLIKLDICDSRN 786

Query: 552  LEHFPEILEKMEHLKRIYSDRTPITELPS----------------SFENLPGLEVLF--- 592
            L+  P  L  + +L R++     I E+P                 + +NL GLE L    
Sbjct: 787  LQRLPN-LASVTNLTRLHLKEVGIHEIPGLGKLKLLESLSICNAPNLDNLDGLENLVLLK 845

Query: 593  ---VEDCSKLDNLPDNIGSLEYLY-YILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
               +E C  L  LP ++  L  L+  ++     + ++     L + L  LD S C  L  
Sbjct: 846  ELALERCPILGKLP-SLAELTKLHKVVIRWCDVLGEIYGLGNLGDSLSHLDISWCPRLTV 904

Query: 649  FPRTFLLGLSAMGLLHISDYAVREI-PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL- 706
                 L  L  +G L  S + +  I P  ++  + L  L +  +    L   +K +  L 
Sbjct: 905  MD--LLHSLLKLGTLVSSGFELTNILPLSLSIYTKLRTLEVRSSQLPDLTN-LKNLRDLT 961

Query: 707  -----RFIHLEDFNMLQSLPELPL--C-------------LKYLHLIDCKMLQSLPVLPF 746
                   I +   + L+SL EL +  C             LK +H+  C  L  +  L  
Sbjct: 962  ITGCRELIEIAGLHTLESLEELSMERCPSVRKLDLAGLIKLKTIHIHICTQLTEIRGLG- 1020

Query: 747  CLESLD---LTGCNMLRSLPELPLC--LQYLNLEDCNMLRSLPEL 786
             LESL    ++GC  ++ LP L     L+Y +L++C  L+ +  L
Sbjct: 1021 GLESLQMLFMSGCQSIKELPNLSGLKNLKYFSLKECRQLKEVNGL 1065


>gi|227438163|gb|ACP30571.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1055

 Score =  229 bits (584), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 218/704 (30%), Positives = 325/704 (46%), Gaps = 93/704 (13%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-----L 57
            SD V+++GIWG  GIGKTT+A+  F+Q S+ F+ S F+ D++ NS      ++     L
Sbjct: 251 GSDEVRMIGIWGPPGIGKTTIARVAFNQLSNSFQLSVFMDDLKANSSRLCSDDYSVKLQL 310

Query: 58  QKQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
           Q+Q +S     K  V    + HF     R+R  K+L+VLD VN   QL  +  E   FG 
Sbjct: 311 QQQFMSQITDHKDMV----VSHFGVVSNRLRDKKVLVVLDGVNRSVQLDAMAKETWWFGP 366

Query: 116 GSRIVVTTRDKRVLEKFRGEE-KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRS 174
           GSRI++TT+D+++   FR      IY VN    +EA + FC + F +N         +R 
Sbjct: 367 GSRIIITTQDQKL---FRAHGINHIYEVNLPTNDEALQIFCTYCFGQNFPKYGFEELARE 423

Query: 175 VVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV 234
           V S +   PL L V+GS L    K  W    + L R+ +S   DI  ILK S++ L    
Sbjct: 424 VTSLSGELPLGLRVMGSYLRGMSKEDW---TNSLPRLRDSLDTDIQSILKFSYDALDDED 480

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMG 291
           K +FL IACFF  E    +   L      V   L +L +KSL+SI    + MH +L+++G
Sbjct: 481 KDLFLHIACFFSSEQIHKMEEHLAKRFLYVRQRLKVLAEKSLISIDSGRIRMHSLLEKLG 540

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNK-GTDAIEGIFLDLSKIK-GINLDPRAFT 349
           R+IV ++S  EPG+R  L+D ++I  VL     G+ ++ GI  +  +I+  I++  +AF 
Sbjct: 541 REIVCKQSIHEPGQRQFLYDKRDICEVLTGGATGSKSVIGIKFEYYRIREEIDISEKAFE 600

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
            MSNL+  K  V  F +  ++  +S     S S V     L+YL  +   L+    PL  
Sbjct: 601 GMSNLQFLK--VCGFTDALQITGVSQICXSSXSYVGNATNLEYLDLR-NCLNMVELPLSL 657

Query: 410 LPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLH 469
                  K        CSK+E         +P++I N +YL+ L   GC SL        
Sbjct: 658 RNLK---KLKRLRLKGCSKLE--------VLPTNI-NLEYLNELDIAGCSSL-------- 697

Query: 470 FVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIE---EVPSSIECLTDLEVLDLRGCK 526
                        +L +F  I   V    L  S++    EVPS I   T+LE L L  C 
Sbjct: 698 -------------DLGDFSTIGNAVNLRELNISSLPQLLEVPSFIGNATNLENLVLSSCS 744

Query: 527 RLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLP 586
           +L  +      L+ L  L L GC+ LE  P  +     L+   S                
Sbjct: 745 KLVELPLFIGNLQKLRWLRLEGCIRLEVLPTNINLESLLELNLS---------------- 788

Query: 587 GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
                   DCS L + P    +LE L       +AI Q+P S+     L+ L  S+ + L
Sbjct: 789 --------DCSMLKSFPQISTNLEKLNL---RGTAIEQVPPSIRSWPHLKELHMSYFENL 837

Query: 647 ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG 690
           + FP      L  +  L ++D  ++E+P  +  +S L   +LSG
Sbjct: 838 KEFPH----ALERITSLSLTDTEIQEVPPLVKQISRLNRFFLSG 877



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 124/291 (42%), Gaps = 52/291 (17%)

Query: 476 INFSYCVNLIEFP----QISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
           ++   C+N++E P     +         G S +E +P++I  L  L  LD+ GC  L   
Sbjct: 642 LDLRNCLNMVELPLSLRNLKKLKRLRLKGCSKLEVLPTNIN-LEYLNELDIAGCSSL--- 697

Query: 532 STSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVL 591
                   ++   + L  LN+   P++LE                 +PS   N   LE L
Sbjct: 698 --DLGDFSTIGNAVNLRELNISSLPQLLE-----------------VPSFIGNATNLENL 738

Query: 592 FVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
            +  CSKL  LP  IG+L+ L ++ L     +  LP+++ L ++L     S C  L+SFP
Sbjct: 739 VLSSCSKLVELPLFIGNLQKLRWLRLEGCIRLEVLPTNINLESLLELN-LSDCSMLKSFP 797

Query: 651 R--TFLLGLSAMGL-----------------LHISDYA-VREIPQEIAYLSSLEILYLSG 690
           +  T L  L+  G                  LH+S +  ++E P  +  ++SL    L+ 
Sbjct: 798 QISTNLEKLNLRGTAIEQVPPSIRSWPHLKELHMSYFENLKEFPHALERITSLS---LTD 854

Query: 691 NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
              + +P ++KQ+S+L    L     L  LP +      ++  DC  L+ L
Sbjct: 855 TEIQEVPPLVKQISRLNRFFLSGCRKLVRLPPISESTHSIYANDCDSLEIL 905



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 151/406 (37%), Gaps = 89/406 (21%)

Query: 515 TDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTP 574
           T+LE LDLR C  +  +  S   L+ L  L L GC  LE  P  +  +E+L  +      
Sbjct: 637 TNLEYLDLRNCLNMVELPLSLRNLKKLKRLRLKGCSKLEVLPTNI-NLEYLNELDIAGCS 695

Query: 575 ITELP--SSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL-YYILAAASAISQLPSSVAL 631
             +L   S+  N   L  L +    +L  +P  IG+   L   +L++ S + +LP  +  
Sbjct: 696 SLDLGDFSTIGNAVNLRELNISSLPQLLEVPSFIGNATNLENLVLSSCSKLVELPLFIGN 755

Query: 632 SNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGN 691
              LR L    C  LE  P T +   S + L       ++  PQ     ++LE L L G 
Sbjct: 756 LQKLRWLRLEGCIRLEVLP-TNINLESLLELNLSDCSMLKSFPQ---ISTNLEKLNLRGT 811

Query: 692 NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESL 751
             E +P  I+    L+ +H+  F  L+  P     +  L L D + +Q +P L   +  L
Sbjct: 812 AIEQVPPSIRSWPHLKELHMSYFENLKEFPHALERITSLSLTDTE-IQEVPPLVKQISRL 870

Query: 752 D---LTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEIL 808
           +   L+GC  L  LP +      +   DC+ L                         EIL
Sbjct: 871 NRFFLSGCRKLVRLPPISESTHSIYANDCDSL-------------------------EIL 905

Query: 809 LCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIR 868
            C                        S         F NC KLN +A + I+  S     
Sbjct: 906 EC------------------------SFSDQIRRLTFANCFKLNQEARDLIIQAS----- 936

Query: 869 HMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSS 914
                      E A             VLPG ++P +F+++++G  
Sbjct: 937 ----------SEHA-------------VLPGGQVPPYFTHRATGGG 959


>gi|13509223|emb|CAC35331.1| N2-A protein [Linum usitatissimum]
          Length = 1075

 Score =  229 bits (584), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 239/858 (27%), Positives = 379/858 (44%), Gaps = 122/858 (14%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S + +I+GI+GMG +GKTTLA A++++ S +FE  CF+ ++R       G+  LQ +++S
Sbjct: 229  STSEKIIGIYGMGRLGKTTLATAVYNKVSMQFERCCFLDNIRETLLKNDGVVALQNKVIS 288

Query: 64   TTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
              L +    A    +     +ERV R K+ +VLDDVNE  +   + G+L  F   SR +V
Sbjct: 289  DILRKDFCQAKNASDGVQMIRERVSRHKIFVVLDDVNESFRFDDIFGKLTAFSADSRFLV 348

Query: 122  TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
            TTRD R LE+ RG   K+++  G+  + + + F   AF  ++ PED        V    G
Sbjct: 349  TTRDARTLERLRG--CKLFKHEGMSHDHSLKLFSKHAFGVDYPPEDYASLCEEFVQVGSG 406

Query: 182  NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
             PL L+V+GS L    KS W   L +L  I    +   Y  LKIS+N+LT   K IFLD+
Sbjct: 407  LPLALKVIGSLLFRTEKSFWKDKLIELKAIPAVNVQ--YR-LKISYNELTDNEKQIFLDV 463

Query: 242  ACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIVRQ 297
            AC F G  K+    +  D     +  +  L+ +SLV I+ N    MHD ++++GR IV +
Sbjct: 464  ACLFVGAKKEIPIYMWSDCGFYPTTTIRTLVQRSLVRINDNEEFWMHDHIRDLGRAIVCE 523

Query: 298  ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
            ES+    KRSR+W   +   +LK+ +G D +E + +D+ + +G  L    F   S LR  
Sbjct: 524  ESQN-LYKRSRIWSNNDAIDILKNREGNDCVEALRVDM-RGEGFALTNEEFKQFSRLR-- 579

Query: 358  KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
                  F E+     ++ +   ++  V LP+        LR+L    Y     PS     
Sbjct: 580  ------FLEV-----LNGDLSGNFKNV-LPS--------LRWLR--VYHGDPCPSGLNLN 617

Query: 418  NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
             L+ L L  S V   WEG      + I+    L  +    C+ L   P          + 
Sbjct: 618  KLMILELEVSDVTDSWEGW-----NEIKAAGKLKVVHLMCCKGLEKVPDLSTCRGLELLR 672

Query: 478  FSYCVNL-------------------IEFPQISGKV------TRLYLGQSAIEEVPSSIE 512
            FS C  +                        + G+V       +L +G S + EVP+ I 
Sbjct: 673  FSICRRMHGELDIRNFKDLKVLDIFQTRITALKGEVESLQNLQQLDVGSSGLIEVPAGIS 732

Query: 513  CLTDLEVLDLRGCKRLK------------------------------RISTSFCKLRSLV 542
             L+ LE L+L   K  K                              R ST+  +L +L 
Sbjct: 733  KLSSLEYLNLTNIKHDKVETLPNGLKILLISSFSLSALPSSLLRLDVRYSTNLRRLPNLA 792

Query: 543  TLILLGCLNLE----HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
            ++  L  L LE    H    L +++ L+ ++    P  +     ENL  L+ L VE C  
Sbjct: 793  SVTNLTRLRLEEVGIHGIPGLGELKLLECLFLRDAPNLDNLDGLENLVLLKELAVERCRI 852

Query: 599  LDNLPDNIGSLEYLY-YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGL 657
            L+ LP ++  L  L+  ++   + + ++     L   L  L+ S C  L       L  L
Sbjct: 853  LEKLP-SLAELTKLHKLVIGQCNILGEIYGLANLGESLSHLEISGCPCLTVVES--LHSL 909

Query: 658  SAMGLLHISDYAVREI-PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR------FIH 710
              +G L +S Y +  I P  ++  + L+ L +  +    L   +K +  L+      FI 
Sbjct: 910  LNLGTLELSGYGITNILPPSLSIYTKLKSLKVYDSQLPDLTN-LKNLRCLKICGCDNFIE 968

Query: 711  LEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF--CLESLDLTGCNMLRSLPELPLC 768
            + D + L+SL EL +    +  +D   L  L +L F  C +  ++ G   L S       
Sbjct: 969  ITDLHTLESLEELRVMGSSIRKLDLTGLVKLEILQFDSCTQLTEIRGLGGLES------- 1021

Query: 769  LQYLNLEDCNMLRSLPEL 786
            LQ L++  C  ++ LP L
Sbjct: 1022 LQRLHMSRCQSIKELPNL 1039


>gi|15235064|ref|NP_193688.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2853080|emb|CAA16930.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|7268749|emb|CAB78955.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|332658795|gb|AEE84195.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1167

 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 201/712 (28%), Positives = 332/712 (46%), Gaps = 95/712 (13%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSE--TAGGLEHLQK 59
           D  D  +IV + GM GIGK+TL KA ++ +   F  S  + ++   SE   A GL  L  
Sbjct: 224 DKRDETRIVEVVGMPGIGKSTLLKAFYETWKTRFLSSALLQNI---SELVKAMGLGRLTG 280

Query: 60  QMLSTTLSEKLEVAGPNIPHFT----KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQ 115
            +L   L ++      NI   T    KE++ +  + IVLD +++   +++L+ +  ++ +
Sbjct: 281 MLLKELLPDE------NIDEETYEPYKEKLLKNTVFIVLDGISDETHIQKLLKDHRKWAK 334

Query: 116 -GSRIVVTTRD-KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKE----NHCPEDLN 169
            GS+IV+  R   R L       +  Y V  L   +   HFC++AF+      +  E   
Sbjct: 335 KGSKIVIARRAVTRDLLHEDSMVRYTYFVPLLSHRDGLNHFCHYAFRHFAAHQNNKEAFM 394

Query: 170 WHSRSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNK 229
             S+  V Y +G+PL+L++LG  L  K  S+W + L  L +     I D   +L++++++
Sbjct: 395 KESKEFVRYARGHPLILKLLGEELREKSLSYWEEKLKSLPKSLSQNIRD--RVLQVTYDE 452

Query: 230 LTPRVKSIFLDIACFFEGEDKDFVASILDDS------ESDVLDILIDKSLVSISGNFLNM 283
           L+   K  FLDIACF    D  +V S+LD S       +  +D L D  ++ IS + + M
Sbjct: 453 LSQVQKDAFLDIACF-RSHDLVYVKSLLDSSGPAFSKATVTIDALKDMFMIYISDSRVEM 511

Query: 284 HDILQEMGRQIVRQESEKEPGKRSRLW------DPKEISRVLKHNKGTDAIEGIFLDLSK 337
           HD+L     ++  +  + +   R R+W      +   ++R+LK   G+ ++   FLD+  
Sbjct: 512 HDLLYTFAMELGPEARDDDGRGRHRIWHHHNQDNKGRLNRLLKRPGGSTSVRSFFLDMYV 571

Query: 338 IK-GINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKK 396
           +K  + L      NM NLR  KFY           S   +E      + +P  L+   ++
Sbjct: 572 MKTDVTLGTDYLKNMRNLRYLKFY----------SSHCPQECTPKENIHIPGELELPLEE 621

Query: 397 LRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVP---------SSIQNF 447
           +R LHW  +P   LP +F PKNLV+L L  SK+ Q W  EK             S ++N 
Sbjct: 622 VRCLHWLNFPKDELPQDFIPKNLVDLKLPYSKIRQIWREEKDAPKLRWVDLNHSSKLENL 681

Query: 448 KYLSA------------------------------LSFKGCQSLRSFPSNLHFVCPVTIN 477
             LS                               L+ KGC  L S P  ++     T+ 
Sbjct: 682 SGLSQALNLERLNLEGCTALKTLLLGPENMASLVFLNLKGCTGLESLPK-INLRSLKTLI 740

Query: 478 FSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCK 537
            S C NL EF  IS  +  LYL  +AI+ +P  +  LT L  L ++ C+ L ++   F K
Sbjct: 741 LSNCSNLEEFWVISETLYTLYLDGTAIKTLPQDMVKLTSLVKLYMKDCEMLVKLPEEFDK 800

Query: 538 LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCS 597
           L+ L  L+  GC  L   P++++ M+ L+ +  D T IT++P    ++  LE L +    
Sbjct: 801 LKVLQELVCSGCKRLSSLPDVMKNMQCLQILLLDGTAITKIP----HISSLERLCLSRNE 856

Query: 598 KLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
           K+  L ++I  L  L ++ L   + +  +P    L   L+ LD++ C+ L +
Sbjct: 857 KISCLSNDIRLLSQLKWLDLKYCTKLVSIPE---LPTNLQCLDANGCESLTT 905



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 180/415 (43%), Gaps = 71/415 (17%)

Query: 549 CLNLEHFPE-------ILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDN 601
           CL+  +FP+       I + +  LK  YS    I ++    ++ P L  + +   SKL+N
Sbjct: 624 CLHWLNFPKDELPQDFIPKNLVDLKLPYS---KIRQIWREEKDAPKLRWVDLNHSSKLEN 680

Query: 602 LPDNIGSLEYLYYILAAASAISQL---PSSVALSNMLRSLDSSHCKGLESFPRTFLLGLS 658
           L     +L      L   +A+  L   P ++A    L  L+   C GLES P+  L  L 
Sbjct: 681 LSGLSQALNLERLNLEGCTALKTLLLGPENMA---SLVFLNLKGCTGLESLPKINLRSLK 737

Query: 659 AMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQ 718
            + L + S+     +  E  Y      LYL G   ++LP  + +++ L  ++++D  ML 
Sbjct: 738 TLILSNCSNLEEFWVISETLY-----TLYLDGTAIKTLPQDMVKLTSLVKLYMKDCEMLV 792

Query: 719 SLPELPLCLKYLHLI---DCKMLQSLPVLPF---CLESLDLTGCNMLRSLPELP----LC 768
            LPE    LK L  +    CK L SLP +     CL+ L L G  + + +P +     LC
Sbjct: 793 KLPEEFDKLKVLQELVCSGCKRLSSLPDVMKNMQCLQILLLDGTAITK-IPHISSLERLC 851

Query: 769 LQYLNLEDC--NMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHS 826
           L       C  N +R L +L    + L ++ C +L S+PE+   LQ LDA+  E L+  +
Sbjct: 852 LSRNEKISCLSNDIRLLSQL----KWLDLKYCTKLVSIPELPTNLQCLDANGCESLTTVA 907

Query: 827 PDL--QWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAIN 884
             L      E + S    F FTNC KL+  A    + ++L                    
Sbjct: 908 NPLATHLPTEQIHST---FIFTNCDKLDRTAKEGFVPEALFST----------------- 947

Query: 885 EKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDS 939
                        PG E+P WF +++ GS + + L PH +    +G A CAV+ S
Sbjct: 948 -----------CFPGCEVPSWFCHEAVGSVLKLNLLPHWNENRFVGIALCAVVGS 991


>gi|315507091|gb|ADU33181.1| putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus]
          Length = 786

 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 214/739 (28%), Positives = 360/739 (48%), Gaps = 101/739 (13%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D  ++VG+ G+GG+GKTTLAK ++++ + +FEG CF++++R  S+   GL  LQ+++L  
Sbjct: 113 DGTRMVGLHGIGGMGKTTLAKTLYNRIADDFEGCCFLANIREASKQHEGLVRLQEKLLYE 172

Query: 65  TLSEK-LEVA----GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
            L +  + V+    G NI    + R+   K+L++LDD++   QL+ L G  D FG GS++
Sbjct: 173 ILMDDFIRVSDLYKGINI---IRNRLCSKKILLILDDIDTSEQLQVLAGGYDWFGYGSKV 229

Query: 120 VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
           +VTTR++ +L+   G   K+  V  L + EA E F   AF+ +  P +    S+  V+Y 
Sbjct: 230 IVTTRNEHLLD-IHG-FNKLRSVPELNYGEALELFSWHAFQCSSPPTEYLQLSKDAVNYC 287

Query: 180 KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           K  PL LEVLGS L    +S +  +L +      +   DI ++L++S+++L   V+ +FL
Sbjct: 288 KNLPLALEVLGSFLYSTDQSKFKGILEEF--AISNLDKDIQNLLQVSYDELEGDVQEMFL 345

Query: 240 DIACFFEGEDKDFVASILDDSE----SDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQI 294
            I+CFF GEDK  V ++L           +  L++ SL++I+  N + MHD++Q++G  I
Sbjct: 346 FISCFFVGEDKTMVETMLKSCGCLCWEKGIQKLMNLSLLTINQWNKVEMHDLIQQLGHTI 405

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGIN-LDPRAFTNMSN 353
            R ++   P ++ +L    +   VL   K   A++ I L+  K   ++ +D  AF  + N
Sbjct: 406 ARSKTSISPSEK-KLLVGDDAMHVLDGIKDARAVKAIKLEFPKPTKLDIIDSTAFRKVKN 464

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSN 413
           L + K  V         P +ST              LD+LP  LR++ W  +P  + PS+
Sbjct: 465 LVVLK--VKNVIS----PKIST--------------LDFLPNSLRWMSWSEFPFSSFPSS 504

Query: 414 FKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCP 473
           +  +NL++L L                 S+IQ+F      +F  C+ L+    +  F   
Sbjct: 505 YSMENLIQLKLP---------------HSAIQHF----GRAFMHCERLKQLDLSNSFFLE 545

Query: 474 VTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRG------CKR 527
              + S  +NL E   +SG ++ + + +S +  +P  I+      V   +        K 
Sbjct: 546 EIPDLSAAINL-ENLSLSGCISLVKVHKS-VGSLPKLIDLSLSSHVYGFKQFPSPLRLKS 603

Query: 528 LKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKME-HLKRIYSDRTPITELPSSFENLP 586
           LKR ST  C +             L+ +P+  ++M+  L+ ++   + IT+L S+   L 
Sbjct: 604 LKRFSTDHCTI-------------LQGYPQFSQEMKSSLEDLWFQSSSITKLSSTIRYLT 650

Query: 587 GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL 646
            L+ L + DC KL  LP  I  L  L  I  + S +S  PSS +  + L  L   H    
Sbjct: 651 SLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQSDLSTFPSSYSCPSSLPLLTRLH---- 706

Query: 647 ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLS-SLEILYLSGNNFESLPAIIKQMSQ 705
                           L+ +     +  + IA+ + SL  L LS NNF  LP+ I     
Sbjct: 707 ----------------LYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSCIVNFKS 750

Query: 706 LRFIHLEDFNMLQSLPELP 724
           LRF+   D   L+ +P++P
Sbjct: 751 LRFLETFDCKFLEEIPKIP 769


>gi|13509209|emb|CAC35323.1| Ngc-A protein [Linum usitatissimum]
          Length = 1075

 Score =  229 bits (583), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 239/858 (27%), Positives = 379/858 (44%), Gaps = 122/858 (14%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S + +I+GI+GMG +GKTTLA A++++ S +FE  CF+ ++R       G+  LQ +++S
Sbjct: 229  STSEKIIGIYGMGRLGKTTLATAVYNKVSMQFERCCFLDNIRETLLKNDGVVALQNKVIS 288

Query: 64   TTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
              L +    A    +     +ERV R K+ +VLDDVNE  +   + G+L  F   SR +V
Sbjct: 289  DILRKDFCQAKNASDGVQMIRERVSRHKIFVVLDDVNESFRFDDIFGKLTAFSADSRFLV 348

Query: 122  TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
            TTRD R LE+ RG   K+++  G+  + + + F   AF  ++ PED        V    G
Sbjct: 349  TTRDARTLERLRG--CKLFKHEGMSHDHSLKLFSKHAFGVDYPPEDYASLCEEFVQVGSG 406

Query: 182  NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
             PL L+V+GS L    KS W   L +L  I    +   Y  LKIS+N+LT   K IFLD+
Sbjct: 407  LPLALKVIGSLLFRTEKSFWKDKLIELKAIPAVNVQ--YR-LKISYNELTDNEKQIFLDV 463

Query: 242  ACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIVRQ 297
            AC F G  K+    +  D     +  +  L+ +SLV I+ N    MHD ++++GR IV +
Sbjct: 464  ACLFVGAKKEIPIYMWSDCGFYPTTTIRTLVQRSLVRINDNEEFWMHDHIRDLGRAIVCE 523

Query: 298  ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLF 357
            ES+    KRSR+W   +   +LK+ +G D +E + +D+ + +G  L    F   S LR  
Sbjct: 524  ESQN-LYKRSRIWSNNDAIDILKNREGNDCVEALRVDM-RGEGFALTNEEFKQFSRLR-- 579

Query: 358  KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
                  F E+     ++ +   ++  V LP+        LR+L    Y     PS     
Sbjct: 580  ------FLEV-----LNGDLSGNFKNV-LPS--------LRWLR--VYHGDPCPSGLNLN 617

Query: 418  NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
             L+ L L  S V   WEG      + I+    L  +    C+ L   P          + 
Sbjct: 618  KLMILELEVSDVTDSWEGW-----NEIKAAGKLKVVHLMCCKGLEKVPDLSTCRGLELLR 672

Query: 478  FSYCVNL-------------------IEFPQISGKV------TRLYLGQSAIEEVPSSIE 512
            FS C  +                        + G+V       +L +G S + EVP+ I 
Sbjct: 673  FSICRRMHGELDIRNFKDLKVLDIFQTRITALKGEVESLQNLQQLDVGSSGLIEVPAGIS 732

Query: 513  CLTDLEVLDLRGCKRLK------------------------------RISTSFCKLRSLV 542
             L+ LE L+L   K  K                              R ST+  +L +L 
Sbjct: 733  KLSSLEYLNLTNIKHDKVETLPNGLKILLISSFSLSALPSSLFRLDVRYSTNLRRLPNLA 792

Query: 543  TLILLGCLNLE----HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSK 598
            ++  L  L LE    H    L +++ L+ ++    P  +     ENL  L+ L VE C  
Sbjct: 793  SVTNLTRLRLEEVGIHGIPGLGELKLLECLFLRDAPNLDNLDGLENLVLLKELAVERCRI 852

Query: 599  LDNLPDNIGSLEYLY-YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGL 657
            L+ LP ++  L  L+  ++   + + ++     L   L  L+ S C  L       L  L
Sbjct: 853  LEKLP-SLAELTKLHKLVIGQCNILGEIYGLANLGESLSHLEISGCPCLTVVES--LHSL 909

Query: 658  SAMGLLHISDYAVREI-PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLR------FIH 710
              +G L +S Y +  I P  ++  + L+ L +S +    L   +K +  L+      FI 
Sbjct: 910  LNLGTLELSGYGITNILPPSLSIYTKLKSLKVSDSQLPDLTN-LKNLRCLKICGCDNFIE 968

Query: 711  LEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF--CLESLDLTGCNMLRSLPELPLC 768
            +   + L+SL EL +    +  +D   L  L +L F  C +  ++ G   L S       
Sbjct: 969  ITGLHTLESLEELRVMGSSIRKLDLTGLVKLEILQFDSCTQLTEIRGLGGLES------- 1021

Query: 769  LQYLNLEDCNMLRSLPEL 786
            LQ L++  C  ++ LP L
Sbjct: 1022 LQRLHMSRCQSIKELPNL 1039


>gi|224060459|ref|XP_002300210.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222847468|gb|EEE85015.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 524

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/324 (43%), Positives = 203/324 (62%), Gaps = 11/324 (3%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           SD V +VG+ G+GG+GKTT++KA+++  +++FEGSCF+S+VR  S+  G L  LQ+ +L 
Sbjct: 193 SDGVCMVGLCGIGGVGKTTISKAVYNLIANQFEGSCFLSNVREISKQHG-LLRLQETLLY 251

Query: 64  TTLSEKLEVAGP--NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             L +K  V G      +  ++R+R  K+LIV+DD + + QLK+L GE D FG GSR+++
Sbjct: 252 EILGDKNLVLGSVDRGINVIRDRLRNKKVLIVIDDADNLDQLKQLAGEPDWFGLGSRVII 311

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRD+ +L     E  ++Y+V  L  ++A   F   AF+  H  ED    S   V Y +G
Sbjct: 312 TTRDEHLLVAHGVE--RLYKVKELCPDDALMLFSWNAFRNPHPSEDHLEVSLRAVRYAQG 369

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L VLG+ L  +    W   L  L RI   +I   Y++LKISF+ L    K+IFLDI
Sbjct: 370 LPLALVVLGAFLYGRSIREWESELDRLKRIPNKQI---YEVLKISFDGLEYHEKTIFLDI 426

Query: 242 ACFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
           A FF+G++KD+V  ILD  D   D+ + +LI+KSL+ I  N + MH++LQ MGRQIV QE
Sbjct: 427 ARFFKGQEKDYVIKILDACDVNPDIGIQVLIEKSLIYIENNKIQMHELLQSMGRQIVHQE 486

Query: 299 SEKEPGKRSRLWDPKEISRVLKHN 322
           S   PG+RSRLW  +++  VL  N
Sbjct: 487 SPNIPGRRSRLWFHEDVLHVLTEN 510


>gi|227438171|gb|ACP30575.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1609

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 219/761 (28%), Positives = 344/761 (45%), Gaps = 155/761 (20%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-----LQKQM 61
            V+++GIWG  GIGKTT A+ ++DQ S EF+ S F+ +++G  + + G +H      Q+++
Sbjct: 426  VKVIGIWGPAGIGKTTAARVLYDQVSPEFQFSTFLENIKGCFKRSFGNDHQLKLRFQEKL 485

Query: 62   LSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
            LS   ++K  V    + H     +++   K+L+VLD+V+   QL+  +     FG+GS +
Sbjct: 486  LSQIFNQKDIV----VRHLGGAPQKLSDQKVLVVLDEVDSWWQLEE-VANRAWFGRGSMV 540

Query: 120  VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKE---NHCPEDLNWHSRSVV 176
            ++TT D+++L+    E  +IY++     +EA +  C +AF +   N+  E L W     V
Sbjct: 541  IITTEDRKLLKALGLEANQIYKMKFPTTDEALQILCLYAFGQKFPNYDFETLAWE----V 596

Query: 177  SYTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
            +   GN PL L V+GS L    K  W   L  L    +SEI      LK+S+N L+ + K
Sbjct: 597  TELAGNLPLGLRVMGSYLRGMSKKEWIDALPSLRSSLDSEIEST---LKLSYNVLSNKEK 653

Query: 236  SIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGR 292
            S+FL IACFF G   D V SIL+ S+ +V   L  L  +SL+     ++ MH +LQ+MG+
Sbjct: 654  SLFLHIACFFAGFKVDRVKSILEKSDLNVNHGLQTLAYRSLIYRENGYVEMHSLLQQMGK 713

Query: 293  QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG--INLDPRAFTN 350
            +I                             GT  + GI   L K++G  I +   AF  
Sbjct: 714  EI-----------------------------GTGTVLGI--KLLKLEGEEIKISKSAFQG 742

Query: 351  MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
            + NL        +F +I+               +  P GL+ LP KLRY+HW   PLR  
Sbjct: 743  IRNL--------QFLDIDG------------GTLNTPEGLNCLPNKLRYIHWKQSPLRFW 782

Query: 411  PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
            PS F  K LVEL +  S  E+ WEG        I+ F  L  +     + L+  P     
Sbjct: 783  PSKFSEKLLVELIMPNSNFEKLWEG--------IKPFPCLKRMDLSSSEYLKEIPDLSKA 834

Query: 471  VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                 ++  YC +L+                    E+PSSI  L +LE LDL  C+ L++
Sbjct: 835  TSLEILDLHYCRSLL--------------------ELPSSIGRLINLEKLDLHYCRSLEK 874

Query: 531  IS---------------------TSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY 569
            +S                     +S         L + G  +L+ FP++   +  L  + 
Sbjct: 875  LSGCSSLKELDLSDSGIGALELPSSVSTWSCFYRLNMSGLSDLKKFPKVPYSIVEL--VL 932

Query: 570  SDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSV 629
            S  T I E+P   ENL  L+ L +  C  L+ +  NI  LE L               ++
Sbjct: 933  SG-TGIEEVPPWIENLFRLQQLIMFGCRNLEIVSPNISKLENL--------------QTI 977

Query: 630  ALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHI-SDYAVREI-----PQEIAYLSSL 683
            AL       + S+  G E F    + G  + G+    SD  V  I     P++   L+S 
Sbjct: 978  ALCKHDDVPEMSY--GDEVFTAVIVGGPDSHGIWRFRSDLNVHYILPICLPKKA--LTSP 1033

Query: 684  EILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
              L+L     +++P  I+++S L  + +    +L  LP+LP
Sbjct: 1034 ISLHLFSGGLKTIPDCIRRLSGLSELSITGCIILTELPQLP 1074


>gi|336238977|gb|AEI27415.1| TIR_2 [Helianthus annuus]
          Length = 1055

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 232/768 (30%), Positives = 336/768 (43%), Gaps = 147/768 (19%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKL----EVAGP 75
           KTTLA A + + SH FE  C + ++R  S +  GL+ LQ+++LS  L   +    E+ G 
Sbjct: 285 KTTLASAAYMEISHLFEACCLLENIREES-SKHGLKKLQEKILSVALKTTVVVDSEIEGR 343

Query: 76  NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGE 135
           ++    K R+   ++L+VLDDV+E+ QL+ L G  D FG+GSRI++TTRDK +L      
Sbjct: 344 SM---IKRRLCHKRVLVVLDDVDELEQLEALAGSHDWFGEGSRIIITTRDKHLLSS--RA 398

Query: 136 EKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
              IY V+ L + EA + F   A+ ++   ED    S  VVSY  G PL L+VLGS L  
Sbjct: 399 HTNIYEVSLLSYYEAIKLFNRHAYYKDKPIEDYEKLSLRVVSYAGGLPLALKVLGSFLYD 458

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGE---DKDF 252
           K K  W   L  L  I E ++    + LKIS++ L P  K +FLDIACF       + D 
Sbjct: 459 KDKDEWKSTLAKLKCIPEEKV---MERLKISYDGLEPYQKDLFLDIACFMRHNYSLEMDE 515

Query: 253 VASILDDSE---SDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRL 309
              +LD         L +L  KSL+ +S     MHD+++EM   IVR E      K SR+
Sbjct: 516 AMMVLDACNFYPVIGLKVLEQKSLIKVSKYGFEMHDLIEEMAHYIVRGEHPNNLEKHSRI 575

Query: 310 WDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEK 369
           W  +++  +        ++E                                      E 
Sbjct: 576 WRWEDLRYLCDMGAAAPSMEN-------------------------------------EV 598

Query: 370 LPSMSTEEQLSYSKVQLPNGLDYLP--KKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCS 427
           L S +      Y +   P   D +   K LR++ WD YP  + PSNF+P  L  L LR S
Sbjct: 599 LASFAM-----YYRSSHPGLSDVVANMKNLRWIKWDWYPASSFPSNFQPTKLRCLMLRSS 653

Query: 428 KVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEF 487
             E  WEG K     S+ N K    L  +  +SL + P      C               
Sbjct: 654 WQETLWEGCK-----SLPNLK---ILDLRESKSLITTPDFEGLPC--------------- 690

Query: 488 PQISGKVTRLYL-GQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLIL 546
                 + RL L G  ++EE+  SI     L  ++L  C  LKR       ++ L TLIL
Sbjct: 691 ------LERLILWGCESLEEIHPSIGYHKRLVFVNLTSCTALKRFP-PIIHMKKLETLIL 743

Query: 547 LGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLF-VEDCSKLDNLPDN 605
            GC   + FP+I   M+ L  +   RT I  +P S        V F + DC +L  +  N
Sbjct: 744 DGCRRPQQFPDIQSNMDSLVTLDLSRTGIEIIPPSIGRFCTNLVSFNLSDCPRLKRIEGN 803

Query: 606 IGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSA------ 659
                  +++L +                L+ L+   C GL+SF     + L        
Sbjct: 804 -------FHLLKS----------------LKDLNLYGCIGLQSFHHDGYVSLKRPQFPRF 840

Query: 660 MGLLHIS--DYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNML 717
           +  L++S       +I  +I  L +L++L LSGNNF  LP+ I Q+              
Sbjct: 841 LRKLNLSWCKLGDGDILSDICELLNLQLLDLSGNNFSRLPSRISQLP------------- 887

Query: 718 QSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPEL 765
                   CLKYL+L  C  L  LP LP  +  L + GC+ L  + +L
Sbjct: 888 --------CLKYLNLTCCARLAELPDLPSSIALLYVDGCDSLEIVRDL 927



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 139/322 (43%), Gaps = 55/322 (17%)

Query: 493 KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST-SFCKLRSLVTLILLGCLN 551
           K+  L L  S  E +    + L +L++LDLR  K L  I+T  F  L  L  LIL GC +
Sbjct: 644 KLRCLMLRSSWQETLWEGCKSLPNLKILDLRESKSL--ITTPDFEGLPCLERLILWGCES 701

Query: 552 LEHFPEILEKMEHLKR-IYSDRTPITELPS--SFENLPGLEVLFVEDCSKLDNLPDNIGS 608
           LE   EI   + + KR ++ + T  T L       ++  LE L ++ C +    PD   +
Sbjct: 702 LE---EIHPSIGYHKRLVFVNLTSCTALKRFPPIIHMKKLETLILDGCRRPQQFPDIQSN 758

Query: 609 LEYLYYILAAASAISQLPSSVA-LSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD 667
           ++ L  +  + + I  +P S+      L S + S C  L+     F L            
Sbjct: 759 MDSLVTLDLSRTGIEIIPPSIGRFCTNLVSFNLSDCPRLKRIEGNFHL------------ 806

Query: 668 YAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCL 727
                       L SL+ L L G               L+  H + +  L+  P+ P  L
Sbjct: 807 ------------LKSLKDLNLYG------------CIGLQSFHHDGYVSLKR-PQFPRFL 841

Query: 728 KYLHLIDCKMLQSLPVLPFC----LESLDLTGCNMLR---SLPELPLCLQYLNLEDCNML 780
           + L+L  CK+     +   C    L+ LDL+G N  R    + +LP CL+YLNL  C  L
Sbjct: 842 RKLNLSWCKLGDGDILSDICELLNLQLLDLSGNNFSRLPSRISQLP-CLKYLNLTCCARL 900

Query: 781 RSLPELPLCLQLLTVRNCNRLQ 802
             LP+LP  + LL V  C+ L+
Sbjct: 901 AELPDLPSSIALLYVDGCDSLE 922


>gi|315507087|gb|ADU33179.1| putative NBS-LRR protein [Cucumis sativus]
          Length = 855

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 216/785 (27%), Positives = 361/785 (45%), Gaps = 166/785 (21%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ + + G++G+GG+GKTT+AKA++++ + EFEG CF+S++R  S   GGL   QK++L 
Sbjct: 25  SNGITMFGLYGVGGMGKTTIAKALYNKIADEFEGCCFLSNIREASNQYGGLVQFQKELLC 84

Query: 64  TTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             L +   +   N+P      + R+   K+L++LDDV+   QL+ L G  D FG GS+++
Sbjct: 85  EILMDD-SIKVSNLPRGITIIRNRLYSKKILLILDDVDTREQLQALAGGHDWFGHGSKVI 143

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            TTR+K++L     +  K+  V GL+++EA E F    F+ +H        S+  V Y K
Sbjct: 144 ATTRNKQLLVTHGFD--KMQNVGGLDYDEALELFSWHCFRNSHPLNVYLELSKRAVDYCK 201

Query: 181 GNPLVLEVLGSSL-CLKRKSHWGKVLHDLNRICESEIH----DIYDILKISFNKLTPRVK 235
           G PL LEVLGS L  +   S++ ++L       E E H    DI D L+IS++ L     
Sbjct: 202 GLPLALEVLGSFLHSIGDPSNFKRILD------EYEKHYLDKDIQDSLRISYDGL----- 250

Query: 236 SIFLDIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQI 294
                                    E + +  L++ SL++I   N + MH+I+Q+MGR I
Sbjct: 251 -------------------------EDEGITKLMNLSLLTIGRFNRVEMHNIIQQMGRTI 285

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
              E+ K   KR RL    +   VL  NK   A++ I L+  K   +++D RAF  + NL
Sbjct: 286 HLSETSKS-HKRKRLLIKDDAMDVLNGNKEARAVKVIKLNFPKPTKLDIDSRAFDKVKNL 344

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            +          +E   + S+E           + L+YLP  LR+++W  +P  +LP+ +
Sbjct: 345 VV----------LEVGNATSSES----------STLEYLPSSLRWMNWPQFPFSSLPTTY 384

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             +NL+EL L       P+        SSI++F       +  C+ L+            
Sbjct: 385 TMENLIELKL-------PY--------SSIKHF----GQGYMSCERLKE----------- 414

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            IN S    L+E P +S  +                     +L+ L+L GC+ L ++  S
Sbjct: 415 -INLSDSNLLVEIPDLSTAI---------------------NLKYLNLVGCENLVKVHES 452

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
              L  LV L         HF   ++  E             + PS  + L  L+ L ++
Sbjct: 453 IGSLSKLVAL---------HFSSSVKGFE-------------QFPSCLK-LKSLKFLSMK 489

Query: 595 DCSKLDNLP---DNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR 651
           +C   +  P   + + S+EYL   +  ++   QL  ++     L+ L   +CK L + P 
Sbjct: 490 NCRIDEWCPQFSEEMKSIEYLS--IGYSTVTYQLSPTIGYLTSLKHLSLYYCKELTTLPS 547

Query: 652 TF--LLGLSAMGLL--HISDYAVRE---IPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
           T   L  L+++ +L  ++S +       +P  + YL+ L I+     N + L  I+    
Sbjct: 548 TIYRLTNLTSLTVLDSNLSTFPFLNHPSLPSSLFYLTKLRIVGCKITNLDFLETIVYVAP 607

Query: 705 QLRFIHLEDFNMLQSLPELPLC------LKYLHLIDCKMLQSLPVLPFCLESLDLTGCNM 758
            L+ + L + N  +    LP C      LKYL+ +DC++L+ +  +P  +  +   G   
Sbjct: 608 SLKELDLSENNFCR----LPSCIINFKSLKYLYTMDCELLEEISKVPEGVICMSAAGSIS 663

Query: 759 LRSLP 763
           L   P
Sbjct: 664 LARFP 668



 Score = 46.6 bits (109), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 155/385 (40%), Gaps = 80/385 (20%)

Query: 551 NLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
           +++HF +     E LK I  SD   + E+P        L+ L +  C  L  + ++IGSL
Sbjct: 398 SIKHFGQGYMSCERLKEINLSDSNLLVEIPD-LSTAINLKYLNLVGCENLVKVHESIGSL 456

Query: 610 EYLY--YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD 667
             L   +  ++     Q PS + L + L+ L   +C+  E  P+ F   + ++  L I  
Sbjct: 457 SKLVALHFSSSVKGFEQFPSCLKLKS-LKFLSMKNCRIDEWCPQ-FSEEMKSIEYLSIGY 514

Query: 668 YAVR-EIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNM----LQSLP 721
             V  ++   I YL+SL+ L L       +LP+ I +++ L  + + D N+      + P
Sbjct: 515 STVTYQLSPTIGYLTSLKHLSLYYCKELTTLPSTIYRLTNLTSLTVLDSNLSTFPFLNHP 574

Query: 722 ELPLCLKYL---HLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCN 778
            LP  L YL    ++ CK                +T  + L ++  +   L+ L+L + N
Sbjct: 575 SLPSSLFYLTKLRIVGCK----------------ITNLDFLETIVYVAPSLKELDLSENN 618

Query: 779 MLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKS 838
             R    LP C     + N   L+ L         +D  +LE++SK        PE    
Sbjct: 619 FCR----LPSC-----IINFKSLKYL-------YTMDCELLEEISK-------VPE---- 651

Query: 839 AAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGS---LI 895
             IC      + L    NN  LAD                  M+ ++ +   +G     +
Sbjct: 652 GVICMSAAGSISLARFPNN--LADF-----------------MSCDDSVEYCKGGELKQL 692

Query: 896 VLPGSEIPDWFSNQSSGSSICIQLP 920
           VL    IPDW+  +S   S+   LP
Sbjct: 693 VLMNCHIPDWYRYKSMSDSLTFFLP 717


>gi|13509211|emb|CAC35325.1| Ngc-B protein [Linum usitatissimum]
 gi|13509232|emb|CAC35336.1| Nbi-B protein [Linum usitatissimum]
          Length = 1108

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 249/879 (28%), Positives = 393/879 (44%), Gaps = 133/879 (15%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +D S + +I+GI+GMGG+GKTTLAKA+F++ S +FE  CF+ ++R       G+  LQ +
Sbjct: 227  LDHSTSERIIGIYGMGGLGKTTLAKAVFNKVSMQFERCCFLDNIRETLLRNDGVVALQNK 286

Query: 61   MLSTTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            ++S  L +  + A    +     +ERVRR K+ +VLDD++E      + G+L  F   SR
Sbjct: 287  VISDILRKDSDQAKNASDGVRIIRERVRRHKIFVVLDDIDESFHFDEIFGKLGDFSTDSR 346

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
             ++TTRD R LE     E K++ +  +  + + + F   AF  ++ PED        +  
Sbjct: 347  FLITTRDARTLELL--NECKMFGLEEMSHDHSLQLFSKHAFGVDYPPEDYASLCEEFIQV 404

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL L+V+GS L    K  W   L +L  I  +++    + LK+S+N+LT   K IF
Sbjct: 405  ASGLPLALKVIGSLLFKSDKRFWEDKLIELKAIPSAKVQ---ERLKVSYNELTHNEKQIF 461

Query: 239  LDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGN-FLNMHDILQEMGRQI 294
            LDIAC F G  K+    +  D +   +  L  L+ +SLV +  N    MHD ++++GR I
Sbjct: 462  LDIACLFVGAKKEVPMYMWSDCDLYPASTLRTLVQRSLVRMDDNKKFWMHDHIRDLGRTI 521

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            VR+E+ + P KRSR+W   +   +LK+ +G D +E + +D+ K +G  L  + F   S L
Sbjct: 522  VREENSQNPYKRSRIWSNNDAIDILKNREGNDCVEALRVDM-KGEGYALTNKEFKQFSRL 580

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            R        F E+     ++ +   ++  + LPN        LR+L    Y     PS  
Sbjct: 581  R--------FLEV-----LNGDLSGNFKNI-LPN--------LRWLR--VYRGDPSPSGL 616

Query: 415  KPKNLVELNLRCSKVEQPWEGE---KACVPSSIQNF---------------KYLSALSFK 456
                LV L L    V   W+G    KA     + N                + L  L F 
Sbjct: 617  NLNKLVILELDGCYVTHSWKGWNEIKAAGKLKVVNLTSCGILEKVPDLSTCRGLELLCFH 676

Query: 457  GCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKV------TRLYLGQSAIEEVPSS 510
             CQ +R       F     ++    +N  E   + G+V       +L +G+S + EVP+ 
Sbjct: 677  KCQWMRGELDIGTFKDLKVLD----INQTEITTLKGEVESLQNLQQLDVGRSGLIEVPAG 732

Query: 511  IECLTDLEVLDL------------RGCKRLKRISTSFCKL-RSLVTLILLGCLNLEHFPE 557
            I  L+ LE LDL             G K L   S S   L  SL+ L +    NL+  P 
Sbjct: 733  ISKLSSLEFLDLTSVKHDEVEMLPNGLKLLVISSFSLSALPSSLIKLDICDSRNLQRLPN 792

Query: 558  ILEKMEHLKRIYSDRTPITELPS----------------SFENLPGLEVLF------VED 595
             L  + +L R++     I E+P                 + +NL GLE L       +E 
Sbjct: 793  -LASVTNLTRLHLKEVGIHEIPGLGKLKLLESLSICNAPNLDNLDGLENLVLLKELALER 851

Query: 596  CSKLDNLPDNIGSLEYLY-YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL 654
            C  L  LP ++  L  L+  ++     + ++     L + L  LD S C  L       L
Sbjct: 852  CPILGKLP-SLAELTKLHKVVIRWCDVLGEIYGLGNLGDSLSHLDISWCPRLTVMD--LL 908

Query: 655  LGLSAMGLLHISDYAVREI-PQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL------R 707
              L  +G L  S + +  I P  ++  + L  L +  +    L   +K +  L       
Sbjct: 909  HSLLKLGTLVSSGFELTNILPLSLSIYTKLRTLEVRSSQLPDLTN-LKNLRDLTITGCRE 967

Query: 708  FIHLEDFNMLQSLPELPL--C-------------LKYLHLIDCKMLQSLPVLPFCLESLD 752
             I +   + L+SL EL +  C             LK +H+  C  L  +  L   LESL 
Sbjct: 968  LIEIAGLHTLESLEELSMERCPSVRKLDLAGLIKLKTIHIHICTQLTEIRGLG-GLESLQ 1026

Query: 753  ---LTGCNMLRSLPELPLC--LQYLNLEDCNMLRSLPEL 786
               ++GC  ++ LP L     L+Y +L++C  L+ +  L
Sbjct: 1027 MLFMSGCQSIKELPNLSGLKNLKYFSLKECRQLKEVNGL 1065


>gi|356545721|ref|XP_003541284.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 653

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 159/469 (33%), Positives = 234/469 (49%), Gaps = 112/469 (23%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQM 61
           + S  V+ +GIWGMGGIGK+TLA A++++ S EFEG CF  +V   SE    + +LQ + 
Sbjct: 210 NGSSEVRTLGIWGMGGIGKSTLATALYNELSPEFEGHCFFINVFDKSE----MSNLQGK- 264

Query: 62  LSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
                                      ++ IVLDDV    QL++LIGE D  G GSR++V
Sbjct: 265 ---------------------------RVFIVLDDVATSEQLEKLIGEYDFLGLGSRVIV 297

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           T+R+K++L        +IY V  L    + + FC   F E    +     SR V+ Y K 
Sbjct: 298 TSRNKQMLSLV----DEIYSVEELSSHHSLQLFCLTVFGEEQPKDGYEDLSRRVIFYCKD 353

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
                       C +++                                      IFLD+
Sbjct: 354 ------------CSQKE--------------------------------------IFLDL 363

Query: 242 ACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISG-NFLNMHDILQEMGRQIVRQ 297
           ACFF+G  +D+VA +L+      +  +++L+DKSL+ IS  N + MHD+ QEMGR+I+RQ
Sbjct: 364 ACFFKGGKRDWVAGLLEAFGFFPASEIEVLLDKSLIRISKYNEIEMHDLTQEMGREIIRQ 423

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRL 356
           +S K+PG+RSRL   +E+  VLKHNKGTD +EGI L+L K+ G + L   +   M+NLR 
Sbjct: 424 QSIKDPGRRSRLCKHEEVVDVLKHNKGTDVVEGIILNLHKLTGDLFLSSDSLAKMTNLRF 483

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
            + +              +  Q +   V L NGL+ L  KLRYLHWD   L +LPSNF  
Sbjct: 484 LRIH----------KGWRSNNQFN---VFLSNGLESLSNKLRYLHWDECCLESLPSNFCA 530

Query: 417 KNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
           + LVE+++  SK+++ W+G        +QN   L  +  +  + L   P
Sbjct: 531 EQLVEISMPRSKLKKLWDG--------VQNLVSLKTIDLQESRDLIEIP 571


>gi|357499385|ref|XP_003619981.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355494996|gb|AES76199.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1151

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 194/652 (29%), Positives = 302/652 (46%), Gaps = 120/652 (18%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           + S+D V ++GI G GG+GKTTL++A+++   H+FE  CF+ +VR NS   G        
Sbjct: 303 LGSNDGVCMIGILGTGGMGKTTLSQAVYNSIVHQFEFKCFLHNVRENSVKHG-------- 354

Query: 61  MLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
                           IP   K R+ + K+L+++DDV+++ Q++ LIGE    G+ +   
Sbjct: 355 ----------------IP-IIKRRLYQKKVLLIVDDVDKIKQVQVLIGEASWLGRDTY-- 395

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
                                  GL  E+A E     AFK        ++     V Y  
Sbjct: 396 -----------------------GLNKEQALELLRTKAFKSKKNDSSYDYILNRAVKYAS 432

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           G PL LEV+GS+L  K  +    +L   +RI      DI  ILK+S++ L    +S+FLD
Sbjct: 433 GLPLALEVVGSNLFGKSIAECESLLDKYDRIPHE---DIQKILKVSYDALAEEQQSVFLD 489

Query: 241 IACFFEGEDKDFVASILDDSES----DVLDILIDKSLVSISGNFLN---MHDILQEMGRQ 293
           IAC F+G  K++V  +L D         + +L+DKSL+ I+G ++    +HD++++MG +
Sbjct: 490 IACVFKGRGKEYVQEVLHDHYGYCIKSHIGVLVDKSLIKINGKYIGRVTLHDLIEDMGME 549

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSN 353
           IVRQES KEPGKRSRLW   +I  VL+  KGT  IE I+L+   +K ++++ +AF  M+N
Sbjct: 550 IVRQESIKEPGKRSRLWCRDDIVHVLQEKKGTSKIEMIYLNSPSMKPVDMNEKAFKKMTN 609

Query: 354 LRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLP-- 411
           L+                       L   K     G  YLP  L +  W   P +TL   
Sbjct: 610 LK----------------------TLIIEKGNFSKGPKYLPSSLVFCKWIGCPSKTLSFL 647

Query: 412 --SNFKPKNLVELNLRCSKVEQPWEGE---------KAC-----VPSSIQNFKYLSALSF 455
              NF+    + L+   S +  P             + C     + +SI     L  LS 
Sbjct: 648 SNKNFEDMKHLILDRSQSLIHIPNVSSLQNLIKFSFENCRNLIKIDNSIWKLNKLEHLSA 707

Query: 456 KGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIE 512
           KGC  L SFP  LH      +  S C +L  FP++  ++T    + L  ++I E P S +
Sbjct: 708 KGCLKLESFPP-LHLPSLKELELSKCDSLKSFPELLCQMTNIKEINLCDTSIGEFPFSFQ 766

Query: 513 CLTDLEVLDLRGCKRLK------RIS-TSFCKLRSLVTLILLGCLNL--EHFPEILEKME 563
            L++L  L +   + L+      R++   F K+ S    ++LG  NL  E  P +L+   
Sbjct: 767 YLSELVFLQVNRVRMLRFQKYNDRMNPIMFSKMYS----VILGETNLSDECLPILLKLFV 822

Query: 564 HLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLD---NLPDNIGSLEYL 612
           ++  +   +     LP        L  L ++DC  L+    +P N+G L  L
Sbjct: 823 NVTSLKLMKNNFKILPECLSECHRLGELVLDDCKFLEEIRGIPPNLGRLSAL 874


>gi|334183877|ref|NP_001185386.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332197260|gb|AEE35381.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1183

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 223/840 (26%), Positives = 373/840 (44%), Gaps = 134/840 (15%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK------LEVA 73
            K+T+AK ++D+FS +F   CF+ +V    +    ++HLQK++LS  L ++      +E  
Sbjct: 225  KSTIAKCLYDRFSRQFPAHCFLENVSKGYD----IKHLQKELLSHILYDEDVELWSMEAG 280

Query: 74   GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFR 133
               I    KER+   K+ +VLD+V++V QL  L  +   FG GSRI++TTRDK +L    
Sbjct: 281  SQEI----KERLGHQKVFVVLDNVDKVEQLHGLAKDPSWFGPGSRIIITTRDKGLLNS-- 334

Query: 134  GEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSL 193
                 IY V  L+ ++A + F   AF      +              G P  L    S L
Sbjct: 335  CGVNNIYEVKCLDDKDALQVFKKLAFGGRPPSDGFEQLFIRASRLAHGLPSALVAFASHL 394

Query: 194  -CLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDF 252
              +     W   L  L    +    ++ +IL+ S++ L    K++FL +ACFF G    +
Sbjct: 395  SAIVAIDEWEDELALLETFPQK---NVQEILRASYDGLDQYDKTVFLHVACFFNGGHLRY 451

Query: 253  VASILDDSESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
            + + L + ++ + + L  K LV+IS    ++MH +L + GR+IVRQES+  P K+  LWD
Sbjct: 452  IRAFLKNCDARI-NHLAAKCLVNISIDGCISMHILLVQTGREIVRQESDWRPSKQRFLWD 510

Query: 312  PKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
            P EI  VL  N GT  +EG+ L L ++   + L    F  M NL   KF+      +  L
Sbjct: 511  PTEIHYVLDSNTGTRRVEGLSLHLCEMADTLLLRNSVFGPMHNLTFLKFFQHLGGNVSNL 570

Query: 371  PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
              +S +  LS              + L+ LHWD YPL  LP  F+P  ++EL+LR SK+ 
Sbjct: 571  QLISDDYVLS--------------RNLKLLHWDAYPLTILPPIFRPHTIIELSLRYSKLN 616

Query: 431  QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
              W+G K  +P+       L  L   G ++LR  P     V    +    C +L++ P+ 
Sbjct: 617  SLWDGTK-LLPN-------LRILDVTGSRNLRELPELSTAVNLEELILESCTSLVQIPE- 667

Query: 491  SGKVTRLYLGQSAIEEVPS--SIECLTDLEVLDLR--GCKRLK-RISTSFCKLRSLVTLI 545
               + RLYL +  +        +  + DL+   L   G KR+   +  S   L SL  L 
Sbjct: 668  --SINRLYLRKLNMMYCDGLEGVILVNDLQEASLSRWGLKRIILNLPHSGATLSSLTDLA 725

Query: 546  LLGCLNL---------EHFP-EILEKMEH------------------LKRIYSDRTPITE 577
            + G + +         +H     ++K  H                  +KR      P+  
Sbjct: 726  IQGKIFIKLSGLSGTGDHLSFSSVQKTAHQSVTHLLNSGFFGLKSLDIKRFSYRLDPVNF 785

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
               SF + P L  L + + + ++++P++I  L+ L  +    +    LP+S+    ML+ 
Sbjct: 786  SCLSFADFPCLTELKLINLN-IEDIPEDICQLQLLETLDLGGNDFVYLPTSMGQLAMLKY 844

Query: 638  LDSSHCKGLESFPR---------------TFLLGLSAMGLLHISDYAVRE---------- 672
            L  S+C+ L++ P+                 L+G+   G  ++ D+ V +          
Sbjct: 845  LSLSNCRRLKALPQLSQVERLVLSGCVKLGSLMGILGAGRYNLLDFCVEKCKSLGSLMGI 904

Query: 673  --------------------------IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
                                      + +E+++ + L  L LS   F  +P  I+++S +
Sbjct: 905  LSVEKSAPGRNELLELSLENCKSLVSLSEELSHFTKLTYLDLSSLEFRRIPTSIRELSFM 964

Query: 707  RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP-FCLESLDLTGCNMLRSLPEL 765
            R ++L + N + SL +LP  LKYL+   C+ L+ +          LD + C  L  + +L
Sbjct: 965  RTLYLNNCNKIFSLTDLPESLKYLYAHGCESLEHVNFSSNHSFNHLDFSHCISLECISDL 1024


>gi|255587945|ref|XP_002534449.1| transferrin, putative [Ricinus communis]
 gi|223525271|gb|EEF27935.1| transferrin, putative [Ricinus communis]
          Length = 597

 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/349 (41%), Positives = 193/349 (55%), Gaps = 67/349 (19%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           +D  + + +WGM GIGKTT+A AIFD+ S EFEG  FV DVR                  
Sbjct: 316 ADISKKLSVWGMAGIGKTTIAGAIFDRISAEFEGKFFVPDVR------------------ 357

Query: 64  TTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
               E+L+ A  N       ++ + K+LIVLDDV    QLK LIGEL  +G G+RI+VT+
Sbjct: 358 ----EELKRARWN-------KLSKKKILIVLDDVTSSQQLKSLIGELSLYGLGTRIIVTS 406

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           RDK+VL   +    KIY V  L + EA   F   AFK+NH  E L   S+  V+Y KG P
Sbjct: 407 RDKQVL---KNGCTKIYEVKKLNYSEALYLFRIHAFKQNHPTEGLMELSKRSVNYAKGIP 463

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L L+VLGS LC +    W     +L ++  S   +I +ILKIS++ L    K+IFLDIAC
Sbjct: 464 LALKVLGSDLCDQGIEEWES---ELAKLQGSPKMEIQNILKISYDGLDENEKNIFLDIAC 520

Query: 244 FFEGEDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEP 303
           FF+GE                                L MH++LQ+MG++IV Q+  K+P
Sbjct: 521 FFKGE--------------------------------LGMHNLLQQMGKRIVYQQCIKQP 548

Query: 304 GKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
           GKRSRLW+ K+I  VL  +KG +A+EGI  DLS+ + + L   AF +MS
Sbjct: 549 GKRSRLWNYKDIYHVLTKDKGIEAVEGISADLSRTRDLKLSSTAFESMS 597


>gi|356502071|ref|XP_003519845.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 694

 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 151/403 (37%), Positives = 229/403 (56%), Gaps = 24/403 (5%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           M+SS+ V  VGIWGMGGIGKTT+A+A+FD+FS +++G CF+ +V+   E  G L  L+++
Sbjct: 116 MESSE-VLFVGIWGMGGIGKTTIARAVFDKFSSQYDGLCFL-NVKEELEQHG-LSLLREK 172

Query: 61  MLSTTL-SEKLEVAGPNIPHFTKERVRRM---KLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           ++S     E L  +G +   F    +RRM   K+L+VLDDVN   Q+K L+GE   FG G
Sbjct: 173 LISELFEGEGLHTSGTSKARFLNSSIRRMGRKKVLVVLDDVNTSEQIKDLVGEPTCFGAG 232

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SR+++T+RD+ VL    G   +I+ V  ++  ++ + FC  AF E+         +  VV
Sbjct: 233 SRVIITSRDQNVLTS--GGVHQIHEVKEMDSRDSLKLFCLNAFNESQPKMGYEKLTEEVV 290

Query: 177 SYTKGNPLVLEVLGSSLCLKRK-SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
              +G PL L VLG+    +     W   L  + +    +I  +   L+ SF+ L    K
Sbjct: 291 KIAQGIPLALRVLGADFRSRSTIDMWESALSKIKKYPNKKIQSV---LRFSFDGLEELEK 347

Query: 236 SIFLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSIS-GNFLNMHDILQEMG 291
             FLDIA FFE + KD+V + LD      +  +++L  K+L++IS  N + MHD+ ++MG
Sbjct: 348 KAFLDIAFFFEEDSKDYVITQLDAWGFYGAVGIEVLQRKALITISKDNRIQMHDLTRQMG 407

Query: 292 RQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNM 351
            +IVRQES   PG+RSRL D +E+  VL+H +GTD +E + +D+S+   + L+   F   
Sbjct: 408 CEIVRQESITNPGRRSRLRDSEEVYNVLRHEQGTDEVEAMQIDVSQAIDLRLELSTFKKF 467

Query: 352 SN------LRLFKFYVPKFYEIEK-LPSMSTEEQLSYSKVQLP 387
           SN      LR  KFY+P   E E+ L   S +    Y   Q+P
Sbjct: 468 SNFKKMPRLRFLKFYLPLDPETERSLMPPSHDGNFWYLGCQVP 510


>gi|145337463|ref|NP_177427.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|110737528|dbj|BAF00706.1| hypothetical protein [Arabidopsis thaliana]
 gi|332197259|gb|AEE35380.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1042

 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 223/840 (26%), Positives = 373/840 (44%), Gaps = 134/840 (15%)

Query: 20   KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK------LEVA 73
            K+T+AK ++D+FS +F   CF+ +V    +    ++HLQK++LS  L ++      +E  
Sbjct: 225  KSTIAKCLYDRFSRQFPAHCFLENVSKGYD----IKHLQKELLSHILYDEDVELWSMEAG 280

Query: 74   GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFR 133
               I    KER+   K+ +VLD+V++V QL  L  +   FG GSRI++TTRDK +L    
Sbjct: 281  SQEI----KERLGHQKVFVVLDNVDKVEQLHGLAKDPSWFGPGSRIIITTRDKGLLNS-- 334

Query: 134  GEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSL 193
                 IY V  L+ ++A + F   AF      +              G P  L    S L
Sbjct: 335  CGVNNIYEVKCLDDKDALQVFKKLAFGGRPPSDGFEQLFIRASRLAHGLPSALVAFASHL 394

Query: 194  -CLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDF 252
              +     W   L  L    +    ++ +IL+ S++ L    K++FL +ACFF G    +
Sbjct: 395  SAIVAIDEWEDELALLETFPQK---NVQEILRASYDGLDQYDKTVFLHVACFFNGGHLRY 451

Query: 253  VASILDDSESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWD 311
            + + L + ++ + + L  K LV+IS    ++MH +L + GR+IVRQES+  P K+  LWD
Sbjct: 452  IRAFLKNCDARI-NHLAAKCLVNISIDGCISMHILLVQTGREIVRQESDWRPSKQRFLWD 510

Query: 312  PKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
            P EI  VL  N GT  +EG+ L L ++   + L    F  M NL   KF+      +  L
Sbjct: 511  PTEIHYVLDSNTGTRRVEGLSLHLCEMADTLLLRNSVFGPMHNLTFLKFFQHLGGNVSNL 570

Query: 371  PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
              +S +  LS              + L+ LHWD YPL  LP  F+P  ++EL+LR SK+ 
Sbjct: 571  QLISDDYVLS--------------RNLKLLHWDAYPLTILPPIFRPHTIIELSLRYSKLN 616

Query: 431  QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
              W+G K  +P+       L  L   G ++LR  P     V    +    C +L++ P+ 
Sbjct: 617  SLWDGTK-LLPN-------LRILDVTGSRNLRELPELSTAVNLEELILESCTSLVQIPE- 667

Query: 491  SGKVTRLYLGQSAIEEVPS--SIECLTDLEVLDLR--GCKRLK-RISTSFCKLRSLVTLI 545
               + RLYL +  +        +  + DL+   L   G KR+   +  S   L SL  L 
Sbjct: 668  --SINRLYLRKLNMMYCDGLEGVILVNDLQEASLSRWGLKRIILNLPHSGATLSSLTDLA 725

Query: 546  LLGCLNL---------EHFP-EILEKMEH------------------LKRIYSDRTPITE 577
            + G + +         +H     ++K  H                  +KR      P+  
Sbjct: 726  IQGKIFIKLSGLSGTGDHLSFSSVQKTAHQSVTHLLNSGFFGLKSLDIKRFSYRLDPVNF 785

Query: 578  LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRS 637
               SF + P L  L + + + ++++P++I  L+ L  +    +    LP+S+    ML+ 
Sbjct: 786  SCLSFADFPCLTELKLINLN-IEDIPEDICQLQLLETLDLGGNDFVYLPTSMGQLAMLKY 844

Query: 638  LDSSHCKGLESFPR---------------TFLLGLSAMGLLHISDYAVRE---------- 672
            L  S+C+ L++ P+                 L+G+   G  ++ D+ V +          
Sbjct: 845  LSLSNCRRLKALPQLSQVERLVLSGCVKLGSLMGILGAGRYNLLDFCVEKCKSLGSLMGI 904

Query: 673  --------------------------IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
                                      + +E+++ + L  L LS   F  +P  I+++S +
Sbjct: 905  LSVEKSAPGRNELLELSLENCKSLVSLSEELSHFTKLTYLDLSSLEFRRIPTSIRELSFM 964

Query: 707  RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLP-FCLESLDLTGCNMLRSLPEL 765
            R ++L + N + SL +LP  LKYL+   C+ L+ +          LD + C  L  + +L
Sbjct: 965  RTLYLNNCNKIFSLTDLPESLKYLYAHGCESLEHVNFSSNHSFNHLDFSHCISLECISDL 1024


>gi|18033509|gb|AAL57179.1|AF345652_1 functional resistance protein KR2 [Glycine max]
          Length = 457

 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 152/431 (35%), Positives = 232/431 (53%), Gaps = 41/431 (9%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           SSD + ++GI GMGG+GK+TLA+A+++  +  F+ SCF+ +VR  S    GL+ LQ  +L
Sbjct: 50  SSDAISMIGIHGMGGVGKSTLARAVYNLHTDHFDDSCFLQNVREES-NRHGLKRLQSILL 108

Query: 63  STTLSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGEL----DQFGQGS 117
           S  L +++ +A         K +++  K+L+VLDDV+E  QL+ ++G+      +FG   
Sbjct: 109 SQILKKEINLASEQQGTSMIKNKLKGKKVLLVLDDVDEHKQLQAIVGKSVWSESEFGTRL 168

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKE-NHCPEDLNWHSRSVV 176
            +++TTRDK++L  +    K+ + V  L  ++A +     AFK  +   +  N     VV
Sbjct: 169 VLIITTRDKQLLTSYGV--KRTHEVKELSKKDAIQLLKRKAFKTYDEVDQSYNQVLNDVV 226

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           ++T G PL LEV+GS+L  K    W   +    RI   EI     ILK+SF+ L    KS
Sbjct: 227 TWTSGLPLALEVIGSNLFGKSIKEWESAIKQYQRIPNKEI---LKILKVSFDALEEEEKS 283

Query: 237 IFLDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
           +FLDI C  +G    E +D + S+ D+     + +L+DKSL+ IS + + +HD+++ MG+
Sbjct: 284 VFLDITCCLKGYKCREIEDILHSLYDNCMKYHIGVLVDKSLIQISDDRVTLHDLIENMGK 343

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL---SKIKGINLDPRAFT 349
           +I RQ+S KE GKR RLW  K+I +VLK N GT  ++ I LD     K + I  +  AF 
Sbjct: 344 EIDRQKSPKETGKRRRLWLLKDIIQVLKDNSGTSEVKIICLDFPISDKQETIEWNGNAFK 403

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
            M NL+                       L      L  G +YLP+ LR L W  +P   
Sbjct: 404 EMKNLK----------------------ALIIRNGILSQGPNYLPESLRILEWHRHPSHC 441

Query: 410 LPSNFKPKNLV 420
           LPS+F   NL 
Sbjct: 442 LPSDFDTTNLA 452


>gi|13509213|emb|CAC35326.1| Ngc-C protein [Linum usitatissimum]
          Length = 1120

 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 250/857 (29%), Positives = 399/857 (46%), Gaps = 113/857 (13%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +DSS + +I+GI GMGG+GKTTLAKA++D+ S +FE   F+ ++R       G+  LQ +
Sbjct: 227  LDSSTSEKIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENIRDTLSEKNGVSILQNK 286

Query: 61   MLSTTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            ++S  L +    A    +     ++RV R KLLIVLDDV+E  Q   ++G+L+ F   SR
Sbjct: 287  IISGILRKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQFDEVLGKLNNFSMDSR 346

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
             ++TTRD R LE  R  E K++ +  +  + +   F   AF     PED    S   V  
Sbjct: 347  FLITTRDARGLELLR--ECKMFELQEMSPDHSLTLFNKNAFGAEFPPEDYAILSNEFVQA 404

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL ++V+GS L    K  W + L +  +I  +++    + LKIS+N+LT   K IF
Sbjct: 405  AAGLPLYIKVIGSLLFRMDKIFWEEKLEEFKKISPTKVQ---ERLKISYNELTYNEKQIF 461

Query: 239  LDIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVS-----ISGNFLN---MHDIL 287
            LDIAC+F G  K     +  D +      +  L  +SL+      + G+ +N   MH+ +
Sbjct: 462  LDIACYFIGSYKIEPMRMWSDCDFYPESTIRYLTQRSLIKLQRSEVKGDDINTFQMHNHV 521

Query: 288  QEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA 347
            +++GR IVR+E+ + P KRSR+W  K+   +LKH KGTD +E + +D+   +G +L    
Sbjct: 522  RDLGRAIVREENNQNPYKRSRIWSNKDAIDMLKHKKGTDCVEVLTVDM---EGEDL---I 575

Query: 348  FTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGL-DYLPKKLRYLHWDTYP 406
             TN               E+EKL  +     LS S  +L     D LP  LR+L    + 
Sbjct: 576  LTNK--------------ELEKLTRL---RYLSVSNARLAGDFKDVLP-NLRWLR--LHS 615

Query: 407  LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP- 465
              ++P+      LV+L L    V   W+G      + ++    L A++ + C  L+  P 
Sbjct: 616  CDSVPTGLYLNKLVDLELVDCSVRDGWKG-----WNELKVAHKLKAVTLERCFHLKKVPD 670

Query: 466  ----SNLHFVCPVTINFSYCVNLIEFPQISG-KVTR-LYLGQSAIEEVPSSIECLTDLEV 519
                 +L F     +NF  C N+     I   K  R L +  + I ++   I  L +L+ 
Sbjct: 671  FSDCGDLEF-----LNFDGCRNMHGEVDIGNFKSLRFLMISNTKITKIKGEIGRLLNLKY 725

Query: 520  LDLRGCKRLKRISTSFCKLRSL--VTLILLGCLNLEHFPEILEKMEHLKRIYSDRT---P 574
            L +     LK +     KL SL  ++L L     L+ F E+L        I +D     P
Sbjct: 726  L-IASNSSLKEVPAGISKLSSLKWLSLTLTDPYKLD-FTEMLPASLTFLSILNDTEKSCP 783

Query: 575  ITELPS-----SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSV 629
             T L +     +  NL  L VLF+ D    + L   +G L+ L Y++     I + P  V
Sbjct: 784  DTSLENLQRLPNLSNLINLSVLFLMDVGIGEIL--GLGKLKMLEYLI-----IERAPRIV 836

Query: 630  ALSN-----MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD----YAVREIPQEIAYL 680
             L       +L+ L    C  L   P   L+ L  +  L I D      +  + Q    L
Sbjct: 837  HLDGLENLVLLQQLRVEGCPVLGKLPS--LVALIRLEKLWIEDCPLVTEINGVGQRWESL 894

Query: 681  SSLEILYLSG-NNFESLPAIIK------QMSQLRFIHLEDFNMLQSLPELPLC----LKY 729
            S L+++  S     ++L +++K      +  +L    L   +++  L +L L      ++
Sbjct: 895  SDLKVVGCSALTGLDALDSMVKLEYLVLEGPELTERVLSSLSIITKLVKLGLWHMSRRQF 954

Query: 730  LHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLC 789
              L + K L  L  L FC E +++ G + L S       ++YL L  C  +R +P+L   
Sbjct: 955  PDLSNLKNLSELS-LSFCEELIEVPGLDTLES-------MEYLYLNGCQSIRKVPDLSGL 1006

Query: 790  --LQLLTVRNCNRLQSL 804
              L+ L V  C +L+ +
Sbjct: 1007 KKLKTLDVEGCIQLKEV 1023


>gi|351722777|ref|NP_001235720.1| resistance protein KR3 [Glycine max]
 gi|24637543|gb|AAN63807.1| resistance protein KR3 [Glycine max]
          Length = 636

 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 152/431 (35%), Positives = 232/431 (53%), Gaps = 41/431 (9%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           SSD + ++GI GMGG+GK+TLA+A+++  +  F+ SCF+ +VR  S   G L+ LQ  +L
Sbjct: 229 SSDAISMIGIHGMGGVGKSTLARAVYNLHTDHFDDSCFLQNVREESNRHG-LKRLQSILL 287

Query: 63  STTLSEKLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGEL----DQFGQGS 117
           S  L +++ +A         K +++  K+L+VLDDV+E  QL+ ++G+      +FG   
Sbjct: 288 SQILKKEINLASEQQGTSMIKNKLKGKKVLLVLDDVDEHKQLQAIVGKSVWSESEFGTRL 347

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKE-NHCPEDLNWHSRSVV 176
            +++TTRDK++L  +    K+ + V  L  ++A +     AFK  +   +  N     VV
Sbjct: 348 VLIITTRDKQLLTSY--GVKRTHEVKELSKKDAIQLLKRKAFKTYDEVDQSYNQVLNDVV 405

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           ++T G PL LEV+GS+L  K    W   +    RI   EI     ILK+SF+ L    KS
Sbjct: 406 TWTSGLPLALEVIGSNLFGKSIKEWESAIKQYQRIPNKEI---LKILKVSFDALEEEEKS 462

Query: 237 IFLDIACFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
           +FLDI C  +G    E +D + S+ D+     + +L+DKSL+ IS + + +HD+++ MG+
Sbjct: 463 VFLDITCCLKGYKCREIEDILHSLYDNCMKYHIGVLVDKSLIQISDDRVTLHDLIENMGK 522

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL---SKIKGINLDPRAFT 349
           +I RQ+S KE GKR RLW  K+I +VLK N GT  ++ I LD     K + I  +  AF 
Sbjct: 523 EIDRQKSPKETGKRRRLWLLKDIIQVLKDNSGTSEVKIICLDFPISDKQETIEWNGNAFK 582

Query: 350 NMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRT 409
            M NL+                       L      L  G +YLP+ LR L W  +P   
Sbjct: 583 EMKNLK----------------------ALIIRNGILSQGPNYLPESLRILEWHRHPSHC 620

Query: 410 LPSNFKPKNLV 420
           LPS+F   NL 
Sbjct: 621 LPSDFDTTNLA 631


>gi|315507079|gb|ADU33175.1| putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus var. hardwickii]
          Length = 1037

 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 215/786 (27%), Positives = 363/786 (46%), Gaps = 168/786 (21%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ + + G++G+GG+GKTT+AKA++++ + EFEG CF+S++R  S   GGL   QK++L 
Sbjct: 207 SNGITMFGLYGVGGMGKTTIAKALYNKIADEFEGCCFLSNIREASNQYGGLVQFQKELLC 266

Query: 64  TTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             L +   +   N+P      + R+   K+L++LDDV++  QL+ L G  D FG GS+++
Sbjct: 267 EILMDD-SIKVSNLPRGITIIRNRLYSKKILLILDDVDKREQLQALAGGHDWFGHGSKVI 325

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            TTR+K++L     +  K+  V GL+++EA E F    F+ +H        S+  V Y K
Sbjct: 326 ATTRNKQLLVTHGFD--KMQNVGGLDYDEALELFSWHCFRNSHPLNVYLELSKRAVDYCK 383

Query: 181 GNPLVLEVLGSSL-CLKRKSHWGKVLHDLNRICESEIH----DIYDILKISFNKLTPRVK 235
           G PL LEVLGS L  +   S++ ++L       E E H    DI D L+IS++ L     
Sbjct: 384 GLPLALEVLGSFLNSIGDPSNFKRILD------EYEKHYLDKDIQDSLRISYDGL----- 432

Query: 236 SIFLDIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQI 294
                                    E + +  L++ SL++I   N + MH+I+Q+MGR I
Sbjct: 433 -------------------------EDEGITKLMNLSLLTIGRFNRVEMHNIIQQMGRTI 467

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
              E+ K   KR RL    +   VL  NK   A++ I L+  K   +++D RAF  + NL
Sbjct: 468 HLSETSKSH-KRKRLLIKDDAMDVLNGNKEARAVKVIKLNFPKPTKLDIDSRAFDKVKNL 526

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            +          +E   + S+E           + L+YLP  LR+++W  +P  +LP+ +
Sbjct: 527 VV----------LEVGNATSSES----------STLEYLPSSLRWMNWPQFPFSSLPTTY 566

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             +NL+EL L       P+        SSI++F       +  C+ L+            
Sbjct: 567 TMENLIELKL-------PY--------SSIKHF----GQGYMSCERLKE----------- 596

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            IN S    L+E P +S  +                     +L+ L+L GC+ L ++  S
Sbjct: 597 -INLSDSNLLVEIPDLSTAI---------------------NLKYLNLVGCENLVKVHES 634

Query: 535 FCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVE 594
              L  LV L         HF   ++  E             + PS  + L  L+ L ++
Sbjct: 635 IGSLSKLVAL---------HFSSSVKGFE-------------QFPSCLK-LKSLKFLSMK 671

Query: 595 DCSKLD----NLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           +C ++D       + + S+EYL   +  ++   QL  ++     L+ L   +CK L + P
Sbjct: 672 NC-RIDEWCPQFSEEMKSIEYLS--IGYSTVTYQLSPTIGYLTSLKHLSLYYCKELTTLP 728

Query: 651 RTF--LLGLSAMGLL--HISDYAVRE---IPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
            T   L  L+++ +L  ++S +       +P  + YL+ L ++     N + L  I+   
Sbjct: 729 STIYRLTNLTSLTVLDSNLSTFPFLNHPSLPSSLFYLTKLRLVGCKITNLDFLETIVYVA 788

Query: 704 SQLRFIHLEDFNMLQSLPELPLC------LKYLHLIDCKMLQSLPVLPFCLESLDLTGCN 757
             L+ + L + N  +    LP C      LKYL+ +DC++L+ +  +P  +  +   G  
Sbjct: 789 PSLKELDLSENNFCR----LPSCIINFKSLKYLYTMDCELLEEISKVPKGVICMSAAGSI 844

Query: 758 MLRSLP 763
            L   P
Sbjct: 845 SLARFP 850



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 152/385 (39%), Gaps = 80/385 (20%)

Query: 551 NLEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL 609
           +++HF +     E LK I  SD   + E+P        L+ L +  C  L  + ++IGSL
Sbjct: 580 SIKHFGQGYMSCERLKEINLSDSNLLVEIPD-LSTAINLKYLNLVGCENLVKVHESIGSL 638

Query: 610 EYLY--YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD 667
             L   +  ++     Q PS + L + L+ L   +C+  E  P+ F   + ++  L I  
Sbjct: 639 SKLVALHFSSSVKGFEQFPSCLKLKS-LKFLSMKNCRIDEWCPQ-FSEEMKSIEYLSIGY 696

Query: 668 YAVR-EIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNM----LQSLP 721
             V  ++   I YL+SL+ L L       +LP+ I +++ L  + + D N+      + P
Sbjct: 697 STVTYQLSPTIGYLTSLKHLSLYYCKELTTLPSTIYRLTNLTSLTVLDSNLSTFPFLNHP 756

Query: 722 ELPLCLKYL---HLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCN 778
            LP  L YL    L+ CK                +T  + L ++  +   L+ L+L + N
Sbjct: 757 SLPSSLFYLTKLRLVGCK----------------ITNLDFLETIVYVAPSLKELDLSENN 800

Query: 779 MLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKS 838
             R    LP C     + N   L+ L         +D  +LE++SK           +  
Sbjct: 801 FCR----LPSC-----IINFKSLKYL-------YTMDCELLEEISK-----------VPK 833

Query: 839 AAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGS---LI 895
             IC      + L    NN                   L   M+ ++ +   +G     +
Sbjct: 834 GVICMSAAGSISLARFPNN-------------------LAEFMSCDDSVEYCKGGELKQL 874

Query: 896 VLPGSEIPDWFSNQSSGSSICIQLP 920
           VL    IPDW+  +S   S+   LP
Sbjct: 875 VLMNCHIPDWYRYKSMSDSLTFFLP 899


>gi|297840113|ref|XP_002887938.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333779|gb|EFH64197.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 965

 Score =  226 bits (575), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 193/653 (29%), Positives = 315/653 (48%), Gaps = 89/653 (13%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +D+ D   IVGI G  GIGKTT+A+A+  + S  F+ +CF+ +++G+S +      L+  
Sbjct: 201 LDNEDGAIIVGICGPSGIGKTTIARALHSRLSSSFQLTCFMENLKGSSNSGLDEYGLKLC 260

Query: 61  MLSTTLSEKLEVAGPNIPHFTK--ERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +    LS+ L      I H     ER+   K+LI+L DV+++ QL+ L  E   FG GSR
Sbjct: 261 LQQQLLSKILNQNDLRIFHLGAIPERLCDQKVLIILADVDDLQQLEALANETSWFGPGSR 320

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I+VTT D+ +LE+   +    Y V+    +EA + FC  AF+++  P         V+  
Sbjct: 321 IIVTTEDQELLEQH--DINNTYHVDFPTTKEARKIFCRSAFRQSSAPYGFEKLVERVIKL 378

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
               PL L V+GSSL  K++  W  +LH L    + +I  +   L++ ++ L    + +F
Sbjct: 379 CSNLPLGLRVMGSSLRRKKEDDWESILHRLENSLDRKIEGV---LRVGYDNLHKNDQFLF 435

Query: 239 LDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSIS--GNFLNMHDILQEMGRQ 293
           L IA FF  +D D V ++L  S  DV   L  L  KSL+ IS  G  + MH +LQ++G++
Sbjct: 436 LLIAFFFNNQDNDHVKAMLGGSNLDVRYGLKTLTYKSLIQISIKGEIM-MHKLLQQVGKE 494

Query: 294 IVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI-KGINLDPRAFTNMS 352
            V+++   + GKR  L D  EI  VL+++ G+  + GI  D+S +   + +   AF  + 
Sbjct: 495 AVQRQ---DNGKRQILIDTDEICDVLENDSGSRNVMGISFDISTLLNDVYISAEAFKRIR 551

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
           NL+    Y  +F          T  +L  S+  +       P +LR LHW+ YP + LP 
Sbjct: 552 NLQFLSIYKTRF---------DTNVRLHLSEDMV------FPPQLRLLHWEVYPGKCLPH 596

Query: 413 NFKPKNLVELNLRCSKVEQPWEG------------EKAC--------------------- 439
            F+P+ LVELNLR +++E+ WEG             ++C                     
Sbjct: 597 TFRPEYLVELNLRDNQLEKLWEGIQPLTNLKKMELLRSCHLKELPDLSDATNLEVLNLAR 656

Query: 440 ------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
                 +P S  N   L  L    C+ L+  P++ +     ++    C  L + P IS  
Sbjct: 657 CESLVEIPPSFGNLHKLEKLIMDFCRKLKVVPTHFNLASLESLGMMGCWQLKKIPDISTN 716

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           +T L +  + +E++  SI   + L+VLD+ G       S +     + + L   G  ++E
Sbjct: 717 ITTLSMTDTMLEDLTESIRLWSGLQVLDIYG-------SVNIYHATAEIYLEGRGA-DIE 768

Query: 554 HFPEILEKMEHLKRIYSDRTP----ITELPSSFENLPGLEVLFVEDCSKLDNL 602
             P  ++ ++ LK ++    P    + ELPSS      L+ L V+ C  L+ L
Sbjct: 769 KIPYCIKDLDGLKELHIYGCPKIASLPELPSS------LKRLIVDTCESLETL 815



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 146/327 (44%), Gaps = 40/327 (12%)

Query: 442 SSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQ 501
           S++ N  Y+SA +FK  ++L+ F S         +      +++  PQ+      +Y G+
Sbjct: 534 STLLNDVYISAEAFKRIRNLQ-FLSIYKTRFDTNVRLHLSEDMVFPPQLRLLHWEVYPGK 592

Query: 502 SAIEEVPSSI--ECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEIL 559
                +P +   E L +L + D     +L+++      L +L  + LL   +L+  P++ 
Sbjct: 593 C----LPHTFRPEYLVELNLRD----NQLEKLWEGIQPLTNLKKMELLRSCHLKELPDLS 644

Query: 560 EKME----HLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLEYLY 613
           +       +L R  S    + E+P SF NL  LE L ++ C KL  +P   N+ SLE L 
Sbjct: 645 DATNLEVLNLARCES----LVEIPPSFGNLHKLEKLIMDFCRKLKVVPTHFNLASLESLG 700

Query: 614 YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
             +     + ++P        L   D+     LE    +  L  S + +L I  Y    I
Sbjct: 701 --MMGCWQLKKIPDISTNITTLSMTDTM----LEDLTESIRL-WSGLQVLDI--YGSVNI 751

Query: 674 PQEIAYLSSLEILYLSGN--NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLH 731
                Y ++ EI YL G   + E +P  IK +  L+ +H+     + SLPELP  LK L 
Sbjct: 752 -----YHATAEI-YLEGRGADIEKIPYCIKDLDGLKELHIYGCPKIASLPELPSSLKRLI 805

Query: 732 LIDCKMLQSLPVLPF--CLESLDLTGC 756
           +  C+ L++L   PF   +E L  + C
Sbjct: 806 VDTCESLETLVPFPFESAIEDLYFSNC 832



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 125/276 (45%), Gaps = 38/276 (13%)

Query: 553 EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLE 610
           E+  E+  +   L++++    P+T       NL  +E+L    C  L  LPD  +  +LE
Sbjct: 601 EYLVELNLRDNQLEKLWEGIQPLT-------NLKKMELL--RSC-HLKELPDLSDATNLE 650

Query: 611 YLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF-LLGLSAMGLLHISDYA 669
            L   LA   ++ ++P S    + L  L    C+ L+  P  F L  L ++G++    + 
Sbjct: 651 VLN--LARCESLVEIPPSFGNLHKLEKLIMDFCRKLKVVPTHFNLASLESLGMMGC--WQ 706

Query: 670 VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHL-EDFNMLQSLPELPLCLK 728
           +++IP +I+  +++  L ++    E L   I+  S L+ + +    N+  +  E+ L  +
Sbjct: 707 LKKIP-DIS--TNITTLSMTDTMLEDLTESIRLWSGLQVLDIYGSVNIYHATAEIYLEGR 763

Query: 729 YLHLIDCKMLQSLPVLPFCLESLD------LTGCNMLRSLPELPLCLQYLNLEDCNMLRS 782
                       +  +P+C++ LD      + GC  + SLPELP  L+ L ++ C  L +
Sbjct: 764 G---------ADIEKIPYCIKDLDGLKELHIYGCPKIASLPELPSSLKRLIVDTCESLET 814

Query: 783 LPELPL--CLQLLTVRNCNRLQSLPEILLCLQELDA 816
           L   P    ++ L   NC +L      ++  Q  DA
Sbjct: 815 LVPFPFESAIEDLYFSNCFKLGQEARRVITKQSRDA 850


>gi|296081089|emb|CBI18283.3| unnamed protein product [Vitis vinifera]
          Length = 1183

 Score =  226 bits (575), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 166/523 (31%), Positives = 268/523 (51%), Gaps = 66/523 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEK-LEVAGPNIP 78
           KTT+AKAI+++ S++++GS F+ ++R  S+  G +  LQK++L   L  K   ++  +  
Sbjct: 22  KTTIAKAIYNEISYQYDGSSFLRNMRERSK--GDILQLQKELLHGILKGKGFRISNVDEG 79

Query: 79  -HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
            +  K  +   ++L++  DV+++ QL+ L  E D F   S I++T+RDK+VL  +     
Sbjct: 80  VNMIKRCLNSKRVLVIFYDVDDLTQLEYLAEEKDWFDVKSTIIITSRDKQVLAHYGVHIS 139

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
             Y V+    +EA E F  +AFK+N   E     S +++ Y  G PL L++LG+SL  K+
Sbjct: 140 --YEVSKFNNKEAIELFSLWAFKQNLPKEAYKNLSYNMIEYADGLPLALKLLGASLFGKK 197

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASIL 257
            S W   L+ L RI   EI+ +   L+ISF+ L    K IFLD+ACFF+ +DK FV+ IL
Sbjct: 198 ISEWESALYKLKRIPHMEINKV---LRISFDGLDDMDKKIFLDVACFFKEKDKYFVSRIL 254

Query: 258 DDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISR 317
                  +  L DK L++IS N ++MHD++Q+MGR+I+RQE  ++ G+RSR+WD  +   
Sbjct: 255 GPHAEYGIATLNDKCLITISKNMIDMHDLIQQMGREIIRQECPEDLGRRSRVWD-SDAYH 313

Query: 318 VLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYE---IEKLPSMS 374
           VL  N GT AIEG+FLD+ K   I     +F  M  LRL K +    Y+   +++ P + 
Sbjct: 314 VLTRNMGTRAIEGLFLDICKFDPIQFAKESFKQMDRLRLLKIHKGDEYDLISLKRFPEIK 373

Query: 375 TEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWE 434
                               +KLR L      ++ LPS                      
Sbjct: 374 GNM-----------------RKLRELDLSGTAIKVLPS---------------------- 394

Query: 435 GEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI-NFSYCVNLIEFPQIS-- 491
                  S  ++ K L  LSF+    L   P ++  +  + + + S+C N++E    S  
Sbjct: 395 -------SLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHC-NIMEGGIPSDI 446

Query: 492 ---GKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
                +  L L  +    +P++I  L+ L+VL+L  C+ L+ I
Sbjct: 447 CHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHI 489



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/243 (39%), Positives = 138/243 (56%), Gaps = 7/243 (2%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S ++E+P  IE  ++L+ L LR CK LK + +S C+ +SL TL   GC  LE FPEILE 
Sbjct: 772  SDMKELPI-IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILED 830

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYL-YYILAAAS 620
            M   +++  D T I E+PSS + L GL+ L +  C  L NLP++I +L  L   I+ +  
Sbjct: 831  MVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCP 890

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTF--LLGLSAMGLLHISDYAVREIPQEIA 678
             +++LP ++     L+SL+  + K L+S       L GL ++  L + +  +REIP  I 
Sbjct: 891  KLNKLPENLG---RLQSLEYLYVKDLDSMNCQLPSLSGLCSLITLQLINCGLREIPSGIW 947

Query: 679  YLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKML 738
            +LSSL+ L L GN F S+P  I Q+  L    L    MLQ +PELP  L+YL    C  L
Sbjct: 948  HLSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQCSSL 1007

Query: 739  QSL 741
            + L
Sbjct: 1008 EIL 1010



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 127/283 (44%), Gaps = 46/283 (16%)

Query: 425  RCSKVEQP----WEGEKACVPSS-------IQNFKYLSALSFKGCQSLRSFPSNL-HFVC 472
            RCS+ +Q     W G   C   S       I+N   L  L  + C++L+S PS++  F  
Sbjct: 753  RCSECQQEATCRWRG---CFKDSDMKELPIIENPSELDGLCLRDCKTLKSLPSSICEFKS 809

Query: 473  PVTINFSYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK 529
              T++ S C  L  FP+I   +    +L L  +AI+E+PSSI+ L  L+ L+L  C+ L 
Sbjct: 810  LTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLV 869

Query: 530  RISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIY-SDRTPITELPSSFENLPGL 588
             +  S C L SL TLI++ C  L   PE L +++ L+ +Y  D   +     S   L  L
Sbjct: 870  NLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCSL 929

Query: 589  EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
              L + +C  L  +P  I  L  L ++    +  S +P  +     L   D SHC+ L+ 
Sbjct: 930  ITLQLINCG-LREIPSGIWHLSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQH 988

Query: 649  FPRTFLLGLSAMGLLHISDYAVREIPQEIAYL-----SSLEIL 686
             P                     E+P  + YL     SSLEIL
Sbjct: 989  IP---------------------ELPSSLEYLDAHQCSSLEIL 1010



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 197/469 (42%), Gaps = 92/469 (19%)

Query: 589  EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
            E+  +E+ S+LD L             L     +  LPSS+     L +L  S C  LES
Sbjct: 776  ELPIIENPSELDGL------------CLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLES 823

Query: 649  FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS-GNNFESLPAIIKQMSQLR 707
            FP   L  +     L +   A++EIP  I  L  L+ L L+   N  +LP  I  ++ LR
Sbjct: 824  FPE-ILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLR 882

Query: 708  FIHLEDFNMLQSLPE---LPLCLKYLHLIDCKMLQ-SLPVLP-FC-LESLDLTGCNMLRS 761
             + +     L  LPE       L+YL++ D   +   LP L   C L +L L  C  LR 
Sbjct: 883  TLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCSLITLQLINCG-LRE 941

Query: 762  LPELPL---CLQYLNLEDCNMLRSLPELPLCLQLLTV---RNCNRLQSLPEILLCLQELD 815
            +P        LQ+L+L   N   S+P+    L  L V    +C  LQ +PE+   L+ LD
Sbjct: 942  IPSGIWHLSSLQHLSLRG-NRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLD 1000

Query: 816  A---SVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAI 872
            A   S LE LS  S  L W+     S   CF+                     RI+    
Sbjct: 1001 AHQCSSLEILSSPST-LLWS-----SLFKCFKS--------------------RIQ---- 1030

Query: 873  ASLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSICIQLPPH-SSCRNLIG 930
                   E  +N K+       + +PGS  IP W S+Q +GS I ++LP +     + +G
Sbjct: 1031 -------EFEVNFKVQ------MFIPGSNGIPGWISHQKNGSKITMRLPRYWYENDDFLG 1077

Query: 931  FAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETKHVDLGYNSRYIEDLI---DSDRV 987
            FA C++     ++ +  R F     F+     L     VD  ++ R  E  +   +S++V
Sbjct: 1078 FALCSLHVPLDIEEE-NRSFKCKLNFNNRAFLL-----VDDFWSKRNCERCLHGDESNQV 1131

Query: 988  ILGFKPCLNVGFPDGYH----HTIAT-FKFFAERKFYKIKRCGLCPVYA 1031
             L + P      P  YH     T+ T F  +   +  K++RCG   +YA
Sbjct: 1132 WLIYYP--KSKIPKKYHSNEYRTLNTSFSEYFGTEPVKVERCGFHFIYA 1178



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 83/182 (45%), Gaps = 47/182 (25%)

Query: 550 LNLEHFPEILEKMEHLKRIYSDRTPITELPSS-FENLPGLEVLFVEDCSKLDNLPDNIGS 608
           ++L+ FPEI   M  L+ +    T I  LPSS FE+L  LE+L     SKL+ +P +I  
Sbjct: 364 ISLKRFPEIKGNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICC 423

Query: 609 LEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY 668
           L                       + L  LD SHC  +E                     
Sbjct: 424 L-----------------------SSLEVLDLSHCNIMEG-------------------- 440

Query: 669 AVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLK 728
               IP +I +LSSL+ L L  N+F S+PA I Q+S+L+ ++L     LQ +PELP  L+
Sbjct: 441 ---GIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPELPSSLR 497

Query: 729 YL 730
            L
Sbjct: 498 LL 499



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 111/284 (39%), Gaps = 70/284 (24%)

Query: 669 AVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL--- 725
           +++  P+    +  L  L LSG   + LP+ +     L+ + +  F M   L ++P+   
Sbjct: 365 SLKRFPEIKGNMRKLRELDLSGTAIKVLPSSL--FEHLKALEILSFRMSSKLNKIPIDIC 422

Query: 726 CLKYLHLID---CKMLQSLPVLPFC----LESLDLTGCNMLRSLP----ELPLCLQYLNL 774
           CL  L ++D   C +++       C    L+ L+L   N  RS+P    +L   LQ LNL
Sbjct: 423 CLSSLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKS-NDFRSIPATINQLSR-LQVLNL 480

Query: 775 EDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPE 834
             C  L+ +PELP  L+LL     N   S    L                          
Sbjct: 481 SHCQNLQHIPELPSSLRLLDAHGSNPTSSRASFL-------------------------- 514

Query: 835 SLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSL 894
            + S   CF  +    LN  + N++ +++ +                         +G  
Sbjct: 515 PVHSLVNCFN-SEIQDLNCSSRNEVWSENSVSTYGS--------------------KGIC 553

Query: 895 IVLPGSE-IPDWFSNQSSGSSICIQLPPHSSCRN-LIGFAFCAV 936
           IVLPGS  +P+W  +      I  +LP + +  N  +GFA C V
Sbjct: 554 IVLPGSSGVPEWIMDD---QGIATELPQNWNQNNEFLGFALCCV 594


>gi|15223549|ref|NP_176043.1| white rust resistance 4 protein [Arabidopsis thaliana]
 gi|12323031|gb|AAG51508.1|AC058785_11 disease resistance protein [Arabidopsis thaliana]
 gi|48310570|gb|AAT41840.1| At1g56510 [Arabidopsis thaliana]
 gi|110741855|dbj|BAE98869.1| hypothetical protein [Arabidopsis thaliana]
 gi|332195280|gb|AEE33401.1| white rust resistance 4 protein [Arabidopsis thaliana]
          Length = 1007

 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 189/665 (28%), Positives = 316/665 (47%), Gaps = 97/665 (14%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           + V++VGI G  GIGK+T+AKA+  + S  F+ +CFV ++  N +   G   ++ ++   
Sbjct: 205 EGVKMVGISGPAGIGKSTIAKALHSRHSSTFQHNCFVDNLWENYKICTGEHGVKLRLHEQ 264

Query: 65  TLSEKLEVAGPNIPHFT--KERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
            +S+ L+  G  + H +  K+R++  K+LI+LDDV  + QL+ L  ++  FG GSR++VT
Sbjct: 265 FVSKILKQNGLELTHLSVIKDRLQDKKVLIILDDVESLAQLETL-ADMTWFGPGSRVIVT 323

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           T +K +L++    +  IY+V      EA   FC  AFK+   P+     +  VV      
Sbjct: 324 TENKEILQQHGIGD--IYQVGYPSESEALTIFCLSAFKQASPPDGFMDLADEVVRICDKL 381

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL L VLGSSL  K ++ W   L  L R C   +  I  +LK+ F  L  + +++FL I 
Sbjct: 382 PLALCVLGSSLLRKSQTDWEDELPRL-RNC---LDGIESVLKVGFESLNEKDQALFLYIT 437

Query: 243 CFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGN---FLNMHDILQEMGRQIVR 296
            FF  E  D V  +L  S  +V   L  L ++ L+ I  +    + +H +L+ M  Q+  
Sbjct: 438 VFFNYECADHVTLMLAKSNLNVRLGLKNLANRYLIHIDHDQKKRVVVHRLLRVMAIQVC- 496

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
             ++++P K   L D ++I+ VL+   G  +I+G+  D ++I  + + P+AF  M NL  
Sbjct: 497 --TKQKPWKSQILVDAEKIAYVLEEATGNRSIKGVSFDTAEIDELMISPKAFEKMCNLLF 554

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
            K Y   ++  ++             K+ +P  + + P+ +R  HWD Y  + LPS+F  
Sbjct: 555 LKVYDAGWHTGKR-------------KLDIPEDIKF-PRTIRLFHWDAYSGKRLPSSFFA 600

Query: 417 KNLVELNLRCSKVEQPWEGEK-------------AC------------------------ 439
           +NLVE+N++ S++++ WEG +             +C                        
Sbjct: 601 ENLVEVNMQDSELQKLWEGTQCLANLKKIDLSRSSCLTELPDLSNATNLEDLYVGSCTAL 660

Query: 440 --VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRL 497
             +PSSI N   L+ +    C+SL   PS ++      +N + C  L  FP I   +  +
Sbjct: 661 VELPSSIGNLHKLAHIMMYSCESLEVIPSLINLTSLTFLNMNKCSRLRRFPDIPTSIEDV 720

Query: 498 YLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK-------------RISTSFCK------- 537
            +  + +EE+P+S+   + L+ + + G   LK              IS S  +       
Sbjct: 721 QVTGTTLEELPASLTHCSGLQTIKISGSVNLKIFYTELPVSVSHINISNSGIEWITEDCI 780

Query: 538 --LRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVED 595
             L +L  L L GC  L   PE+      LK + +D     E  +   N P  E+ F  +
Sbjct: 781 KGLHNLHDLCLSGCKRLVSLPELPRS---LKILQADDCDSLESLNGHLNTPNAELYFA-N 836

Query: 596 CSKLD 600
           C KLD
Sbjct: 837 CFKLD 841



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 115/241 (47%), Gaps = 41/241 (17%)

Query: 552 LEHFPEILEKMEHLKRIYSDRTP-ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
           L+   E  + + +LK+I   R+  +TELP    N   LE L+V  C+ L  LP +IG+L 
Sbjct: 613 LQKLWEGTQCLANLKKIDLSRSSCLTELPD-LSNATNLEDLYVGSCTALVELPSSIGNLH 671

Query: 611 YLYYILA-AASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA 669
            L +I+  +  ++  +PS + L++ L  L+ + C  L  FP                   
Sbjct: 672 KLAHIMMYSCESLEVIPSLINLTS-LTFLNMNKCSRLRRFP------------------- 711

Query: 670 VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLE-DFNMLQSLPELPLCLK 728
             +IP      +S+E + ++G   E LPA +   S L+ I +    N+     ELP+ + 
Sbjct: 712 --DIP------TSIEDVQVTGTTLEELPASLTHCSGLQTIKISGSVNLKIFYTELPVSVS 763

Query: 729 YLHLIDCKMLQSLPVLPFCLESLD------LTGCNMLRSLPELPLCLQYLNLEDCNMLRS 782
           ++++ +  +     +   C++ L       L+GC  L SLPELP  L+ L  +DC+ L S
Sbjct: 764 HINISNSGIEW---ITEDCIKGLHNLHDLCLSGCKRLVSLPELPRSLKILQADDCDSLES 820

Query: 783 L 783
           L
Sbjct: 821 L 821



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 175/423 (41%), Gaps = 104/423 (24%)

Query: 565 LKRIYSDRTPITEL---PSSFENLPGLEVLFVEDCS------KLDNLPDNIGSLEYLYYI 615
           +K +  D   I EL   P +FE +  L  L V D        KLD +P++I     +   
Sbjct: 526 IKGVSFDTAEIDELMISPKAFEKMCNLLFLKVYDAGWHTGKRKLD-IPEDIKFPRTIRLF 584

Query: 616 LAAASAISQLPSSVALSNM----------------------LRSLDSSHCKGLESFPRTF 653
              A +  +LPSS    N+                      L+ +D S    L   P   
Sbjct: 585 HWDAYSGKRLPSSFFAENLVEVNMQDSELQKLWEGTQCLANLKKIDLSRSSCLTELPD-- 642

Query: 654 LLGLSAMGLLHI-SDYAVREIPQEIAYLSSL-EILYLSGNNFESLPAIIKQMSQLRFIHL 711
           L   + +  L++ S  A+ E+P  I  L  L  I+  S  + E +P++I  ++ L F+++
Sbjct: 643 LSNATNLEDLYVGSCTALVELPSSIGNLHKLAHIMMYSCESLEVIPSLI-NLTSLTFLNM 701

Query: 712 EDFNMLQSLPELPLCLKYLHLIDCKMLQSLPV-LPFC--LESLDLTG-CNMLRSLPELPL 767
              + L+  P++P  ++ +  +    L+ LP  L  C  L+++ ++G  N+     ELP+
Sbjct: 702 NKCSRLRRFPDIPTSIEDVQ-VTGTTLEELPASLTHCSGLQTIKISGSVNLKIFYTELPV 760

Query: 768 CLQYLNL---------EDCNMLRSLPEL-PLCLQLLTVRNCNRLQSLPEI---LLCLQEL 814
            + ++N+         EDC  ++ L  L  LCL       C RL SLPE+   L  LQ  
Sbjct: 761 SVSHINISNSGIEWITEDC--IKGLHNLHDLCLS-----GCKRLVSLPELPRSLKILQAD 813

Query: 815 DASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIAS 874
           D   LE L+ H          L +      F NC KL+ +A   I+  S +         
Sbjct: 814 DCDSLESLNGH----------LNTPNAELYFANCFKLDAEARRAIIQQSFVS-------- 855

Query: 875 LRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFC 934
              G+ +               LPG E+P  F +++ G+S+ I   P+S+      F  C
Sbjct: 856 ---GWAL---------------LPGLEVPPEFGHRARGNSLII---PYSASNR---FKVC 891

Query: 935 AVL 937
            V+
Sbjct: 892 VVM 894


>gi|357499375|ref|XP_003619976.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494991|gb|AES76194.1| Disease resistance-like protein [Medicago truncatula]
          Length = 681

 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 182/579 (31%), Positives = 275/579 (47%), Gaps = 132/579 (22%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTT--LSEKLEVAGPNI 77
           K+TLA+AI++    +FE  CF+ +VR N+ T  GL++LQ+++LS T  L+ KL      I
Sbjct: 225 KSTLARAIYNLIGDQFESLCFLHNVRENA-TKHGLQNLQEKLLSETVGLAIKLGHVSEGI 283

Query: 78  PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEK 137
           P   ++R+R+ K++++LDDV+E+ QL+ +IGE +  G GS+++VTTRDK +L     E  
Sbjct: 284 P-IIQQRLRQKKVILILDDVDELKQLQAIIGEPNWLGHGSKVIVTTRDKHLLSCHGIE-- 340

Query: 138 KIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR 197
           +IY V+GL+ EEA E F   AFK N                 K  P  LEV+GS L  K 
Sbjct: 341 RIYVVDGLKEEEALELFRWMAFKSN-----------------KIEP-TLEVVGSHLFGKC 382

Query: 198 KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEG----EDKDFV 253
            + W   L    RI    +  I   L++SF+ L    +S+FLDI C F G    E +D +
Sbjct: 383 IAEWESTLAKYERIPHGHVQKI---LRVSFDCLDEEEQSVFLDITCCFNGCRLAEVEDKL 439

Query: 254 ASILDDSESDVLDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
            +       + + +L++KSL+ I     + +HD++++MG++IVRQES KE G+R+RLW  
Sbjct: 440 HAHYGHCIKNHVGVLVNKSLIKIIRSTVVRLHDLIEDMGKEIVRQESVKEAGERTRLWFD 499

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGI-NLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
           K+I  VLK N  T  IE I+L+   I+ + + + +AF  M NL+        F       
Sbjct: 500 KDIVHVLKENTETSKIEMIYLNGPSIEVLRDWNGKAFKKMKNLKTLIIKSGHF------- 552

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
                            G  Y P  LR L W  YP   +P N                  
Sbjct: 553 ---------------SKGSRYFPSSLRVLEWQRYPSECIPFNV----------------- 580

Query: 432 PWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI-NFSYCVNLIEFPQI 490
                 +C+P+       L  +SF  C +L +  +++ F+  + I +   CV L  FP +
Sbjct: 581 ------SCLPN-------LENISFTNCVNLITVHNSIGFLNKLEILSAQSCVKLTSFPPL 627

Query: 491 SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
                                  LT L++L+L  CK L+                     
Sbjct: 628 Q----------------------LTSLKILNLSHCKSLRS-------------------- 645

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLE 589
               FP+IL KME+++ I    T I   P SF+NL GL 
Sbjct: 646 ----FPDILCKMENIQNIQICETLIEGFPVSFQNLTGLH 680



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 14/166 (8%)

Query: 491 SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRG--CKRLKRIS-TSFCKLRSLVTLILL 547
           +G+ TRL+  +  +  +  + E  + +E++ L G   + L+  +  +F K+++L TLI+ 
Sbjct: 490 AGERTRLWFDKDIVHVLKENTET-SKIEMIYLNGPSIEVLRDWNGKAFKKMKNLKTLIIK 548

Query: 548 G---CLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD 604
                    +FP  L  +E        R P   +P +   LP LE +   +C  L  + +
Sbjct: 549 SGHFSKGSRYFPSSLRVLE------WQRYPSECIPFNVSCLPNLENISFTNCVNLITVHN 602

Query: 605 NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           +IG L  L  IL+A S +            L+ L+ SHCK L SFP
Sbjct: 603 SIGFLNKLE-ILSAQSCVKLTSFPPLQLTSLKILNLSHCKSLRSFP 647


>gi|147778859|emb|CAN73697.1| hypothetical protein VITISV_038484 [Vitis vinifera]
          Length = 784

 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/356 (40%), Positives = 197/356 (55%), Gaps = 52/356 (14%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V++VGIWGMGGIGKTTLA+A+++Q SHZFE  CF+ +V    E    L  LQK+ LS  L
Sbjct: 206 VRMVGIWGMGGIGKTTLARAVYNQISHZFEACCFLENVSDYLEKQDFLS-LQKKFLSQLL 264

Query: 67  -SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
             E L + G       K  +   K+LIV+DDVN    L+ LIG+   FG GSRI++TTR+
Sbjct: 265 EDENLNIKG---CISIKALLCSKKVLIVIDDVNNSKILEDLIGKHGWFGIGSRIIITTRN 321

Query: 126 KRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLV 185
           K++L      E  +Y V  L  + A E F  +AFK+ H  +D    S+ +V Y +G PL 
Sbjct: 322 KQLLVTHGVNE--VYEVEKLNDDNAVELFSRYAFKKAHPIDDYVELSQCIVVYAQGLPLA 379

Query: 186 LEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF 245
           L+VL +                                           + IFLDIACFF
Sbjct: 380 LQVLDNE------------------------------------------RDIFLDIACFF 397

Query: 246 EGEDKDFVASILDDSE--SDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKE 302
           +G DK +V  I        D+ + +LI+KSL+S+  N L +H++LQ+MGR+IVR+ S KE
Sbjct: 398 QGHDKXYVMEIFRSCGFFPDIGIRVLIEKSLISVVENKLMIHNLLQKMGREIVREASPKE 457

Query: 303 PGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
           PGK SRLW   +++ VL  N GT  +EGI LDLS +K IN    AF  M+ LRL K
Sbjct: 458 PGKXSRLWIHDDVNHVLTKNTGTKDVEGISLDLSSLKEINFTNEAFAPMNRLRLLK 513



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 3/78 (3%)

Query: 664 HISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL 723
           +ISD A  +    + +LSSLE L LS NNF +LP+ I ++  L+ + LE+   LQ+LPEL
Sbjct: 556 NISDGATLD---SLGFLSSLEDLDLSENNFVTLPSNIXRLPXLKMLGLENCKRLQALPEL 612

Query: 724 PLCLKYLHLIDCKMLQSL 741
           P  ++ +   +C  L+++
Sbjct: 613 PTSIRSIMARNCTSLETI 630



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 42/172 (24%)

Query: 769 LQYLNLEDCNMLRSLP----ELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSK 824
           L+ L+L + N + +LP     LP  L++L + NC RLQ+LPE+                 
Sbjct: 572 LEDLDLSENNFV-TLPSNIXRLPX-LKMLGLENCKRLQALPEL----------------- 612

Query: 825 HSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAIN 884
                   P S++S        NC  L    +N+     L+ +R      L+      IN
Sbjct: 613 --------PTSIRSIMA----RNCTSLE-TISNQSFGSLLMTVR------LKEHIYCPIN 653

Query: 885 EKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAV 936
                +     V  GS IPDW   QSSG  +  +LPP+    N +G A C V
Sbjct: 654 RDGLLVPALSAVXFGSRIPDWIRYQSSGXEVKAELPPNWFBSNFLGLALCVV 705


>gi|297815586|ref|XP_002875676.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321514|gb|EFH51935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1058

 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 222/753 (29%), Positives = 349/753 (46%), Gaps = 122/753 (16%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQ 58
           D V+++GIWG  GIGKTT+A  +FD+FS  F  +  ++D+R         E    L+ LQ
Sbjct: 246 DEVRMIGIWGPPGIGKTTIATCMFDRFSSRFPLAAIMADIRECYPRLCLDERNAQLK-LQ 304

Query: 59  KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
           KQMLS   ++K       I H    +ER++  K+L+VLD+V+  GQL  L  E+  FG G
Sbjct: 305 KQMLSLIFNQK----DIMISHLGVAQERLKDKKVLLVLDEVDHSGQLDALAKEIQWFGPG 360

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++TT D  VL K RG    +Y+V+    +EAF+ FC  AF +    E     +  V+
Sbjct: 361 SRIIITTEDLGVL-KARG-INHVYKVDFPSNDEAFQIFCMNAFGQKQPYEGFRKLALEVM 418

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           +     PL L+VLGS+L    K  W + L  L    + +I     I++ S++ L    K 
Sbjct: 419 ALAGELPLGLKVLGSALRGMSKPDWERALPRLKTSLDGKIG---SIIQFSYDALCDEDKY 475

Query: 237 IFLDIACFFEGED----KDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
           +FL IAC F  E     K+ +   LD  +   L +L  KSL+SI G  + MH +L++ GR
Sbjct: 476 LFLYIACLFIYESTTKVKELLGKFLDVRQG--LYVLAQKSLISIDGETIKMHTLLEQFGR 533

Query: 293 QIVRQESEKEP-GKRSRLWDPKEISRVLKHNKGTDAIE--GIFLDLSKI-KGINLDPRAF 348
           +  R++  +    KR  L   ++I  VL+ +  TD+    GI LDLSK  + +N+  +A 
Sbjct: 534 ETSRKQFVRHGFTKRQLLVGERDICEVLEDDT-TDSRRFIGINLDLSKTEEELNISEKAL 592

Query: 349 TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLR 408
             M + +  +       + E+L S             +  GL Y  +K+R L W  +   
Sbjct: 593 ERMHDFQFVRIKDKNRAQTERLQS-------------VLEGLIYHSQKIRLLDWSYFQDI 639

Query: 409 TLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNL 468
            LPS F P+ LVEL L+ SK+++ WEG K      ++N K+   +   G + L+  P   
Sbjct: 640 CLPSTFNPEFLVELTLKYSKLQKLWEGTK-----KLKNLKW---MDLGGSEDLKELPDLS 691

Query: 469 HFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRL 528
                  +N   C +L+                    E+PSSI   T LE+L+L  C   
Sbjct: 692 TATNLEEVNLRNCSSLV--------------------ELPSSIGNATKLELLNLDDCSS- 730

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
                             L   NL  F              +D + + ELPS  + +  L
Sbjct: 731 ------------------LNATNLREFD------------LTDCSNLVELPSIGDAIK-L 759

Query: 589 EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES 648
           E L +++CS L  L  +I +     + L+  S++ +LP     +N L+ L   +C  +  
Sbjct: 760 ERLCLDNCSNLVKLFSSINATNLHKFSLSDCSSLVELPDIENATN-LKELILQNCSKVP- 817

Query: 649 FPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRF 708
                         L I  ++ R +   ++Y  SL+      + F  +  ++  MS+LR 
Sbjct: 818 --------------LSIMSWS-RPLKFRMSYFESLKEF---PHAFNIITELVLGMSRLRR 859

Query: 709 IHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           + L + N L SLP+L   L ++   +CK L+ L
Sbjct: 860 LRLYNCNNLISLPQLSNSLSWIDANNCKSLERL 892



 Score = 46.6 bits (109), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 93/399 (23%), Positives = 151/399 (37%), Gaps = 108/399 (27%)

Query: 578 LPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLR 636
           LPS+F   P   V      SKL  L +    L+ L ++ L  +  + +LP     +N L 
Sbjct: 641 LPSTFN--PEFLVELTLKYSKLQKLWEGTKKLKNLKWMDLGGSEDLKELPDLSTATN-LE 697

Query: 637 SLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL 696
            ++  +C  L                         E+P  I   + LE+L L  ++  SL
Sbjct: 698 EVNLRNCSSL------------------------VELPSSIGNATKLELLNL--DDCSSL 731

Query: 697 PAIIKQMSQLRFIHLEDFNMLQSLPEL--PLCLKYLHLIDCKMLQSL--PVLPFCLESLD 752
            A     + LR   L D + L  LP +   + L+ L L +C  L  L   +    L    
Sbjct: 732 NA-----TNLREFDLTDCSNLVELPSIGDAIKLERLCLDNCSNLVKLFSSINATNLHKFS 786

Query: 753 LTGCNMLRSLPEL--PLCLQYLNLEDCNML------------------RSLPELPLCLQL 792
           L+ C+ L  LP++     L+ L L++C+ +                   SL E P    +
Sbjct: 787 LSDCSSLVELPDIENATNLKELILQNCSKVPLSIMSWSRPLKFRMSYFESLKEFPHAFNI 846

Query: 793 LT-------------VRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSA 839
           +T             + NCN L SLP++   L  +DA+  + L +          S  + 
Sbjct: 847 ITELVLGMSRLRRLRLYNCNNLISLPQLSNSLSWIDANNCKSLERLDC-------SFNNP 899

Query: 840 AICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPG 899
            IC  F NC KLN +A + I+  S  R                             +LPG
Sbjct: 900 KICLHFANCFKLNQEARDLIIHTSTSR---------------------------YAILPG 932

Query: 900 SEIPDWFSNQSSG-SSICIQLPPHSSCRNLIGFAFCAVL 937
           +++P  F+++ +   S+ I+L   S     + F  C +L
Sbjct: 933 AQVPACFNHRPTAEGSLKIKL-TKSPLSTFLRFKACIML 970


>gi|20260632|gb|AAM13214.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 672

 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 170/541 (31%), Positives = 275/541 (50%), Gaps = 74/541 (13%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETA---GGLE-HLQKQ 60
           + V+IVGI G  GIGKTT+A+A+    S  F+ SCF+ +VRG+        GL+  LQ++
Sbjct: 188 EQVRIVGICGPAGIGKTTIARALQSLLSSNFQRSCFMENVRGSLNIGLDEYGLKLDLQER 247

Query: 61  MLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
           +LS  +++K    G  I H    ++R+   K+LI+LDDVN++  L  L  +   FG GSR
Sbjct: 248 LLSKIMNQK----GMRIEHLGTIRDRLHDQKVLIILDDVNDL-DLYALADQTTWFGPGSR 302

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           I+VTT D  +L+K   +   +Y V+    +EA E FC  AF+++  P+ +   +  V   
Sbjct: 303 IIVTTEDNELLQKH--DINNVYHVDFPSRKEALEIFCRCAFRQSSAPDTILKLAERVTEL 360

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLH----DLNRICESEIHDIYDILKISFNKLTPRV 234
               PL L V+GSSL  K +  W  ++      L+R  E++       L++ ++ L    
Sbjct: 361 CGNLPLGLCVIGSSLHGKTEDEWEILIRRLEISLDRDNEAQ-------LRVGYDSLHENE 413

Query: 235 KSIFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGN-FLNMHDILQEM 290
           +++FL IA FF  +D+  V ++L DS  DV   L  L +KSL+ IS N  + MH++LQ +
Sbjct: 414 QALFLSIAVFFNYKDRQLVMAMLLDSNLDVEYGLRTLANKSLIHISRNEKIVMHNLLQHV 473

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
           GRQ ++++   EP KR  L D  EI  VL+++     + GI  D+S+I  + L  RAF  
Sbjct: 474 GRQAIQRQ---EPWKRHILIDADEICNVLENDTDARIVSGISFDISRIGEVFLSERAFKR 530

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           + NL+  + +   + E               ++V++P  +++ P +LR L W+ YP R+L
Sbjct: 531 LCNLQFLRVFKTGYDE--------------KNRVRIPENMEF-PPRLRLLQWEAYPRRSL 575

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
                 + LVEL++  S +E+ W+G         Q    L  +S      L+  P   + 
Sbjct: 576 SLKLNLEYLVELDMEGSLLEKLWDG--------TQPLANLKKMSLSSSWYLKKLPDLSNA 627

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                ++   C NL+                    E+PSS   L  L+ L++ GC+RLK 
Sbjct: 628 TNLEELDLRACQNLV--------------------ELPSSFSYLHKLKYLNMMGCRRLKE 667

Query: 531 I 531
           +
Sbjct: 668 V 668


>gi|297741028|emb|CBI31340.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/325 (44%), Positives = 196/325 (60%), Gaps = 16/325 (4%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            SD V++VGI GMGGIGKTTLA+AI+ Q S++FE   F+     N      L  L +++L
Sbjct: 89  QSDDVRMVGICGMGGIGKTTLARAIYSQVSNQFEACSFLE--IANDFKEQDLTSLAEKLL 146

Query: 63  STTLSEK-LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
           S  L E+ L++ G       K R+   K+L+VLD+VN +  L+ L G  D FGQGSRI+V
Sbjct: 147 SQLLQEENLKIKGST---SIKARLHSRKVLVVLDNVNNLTILEHLAGNQDWFGQGSRIIV 203

Query: 122 TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKG 181
           TTRD+R+L + + +  ++   NG   +EAFE   + + K      DL   SR ++ Y KG
Sbjct: 204 TTRDQRLLIQHKVDYYEVAEFNG---DEAFEFLKHHSLKYELLENDLQELSREIIFYAKG 260

Query: 182 NPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDI 241
            PL L VLGS L    K  W   L  L      EI    ++L++S+++L    K+IFLDI
Sbjct: 261 LPLALRVLGSLLFGMNKDEWRDYLVKLKSTPNIEIQ---EVLRLSYDRLDDEEKNIFLDI 317

Query: 242 ACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQ 297
           ACFF+GEDKD V  IL     S    +  LI+KSL++I+  N L MHD++QEMG+ IVRQ
Sbjct: 318 ACFFKGEDKDHVVEILKGCGFSAKCGIKTLINKSLITINFANKLEMHDLIQEMGKGIVRQ 377

Query: 298 ESEKEPGKRSRLWDPKEISRVLKHN 322
           E  KEP +RSRLW+ ++I  VLK N
Sbjct: 378 ECPKEPERRSRLWEHEDIFDVLKRN 402


>gi|357513945|ref|XP_003627261.1| Resistance protein [Medicago truncatula]
 gi|355521283|gb|AET01737.1| Resistance protein [Medicago truncatula]
          Length = 961

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 176/535 (32%), Positives = 261/535 (48%), Gaps = 73/535 (13%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG-GLEHLQKQMLSTT 65
           V ++GIWGMG  GKTT AKAI++Q   +F    F+ +VR   E    G  HLQ+Q+LS  
Sbjct: 199 VCMIGIWGMGRSGKTTTAKAIYNQIHRKFLNRSFIENVREVCEKENRGTIHLQQQLLSDI 258

Query: 66  LSEKLEVAGPNIPHFTKE-RVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
           L+ K ++  P +     E R +  KLL+VLDDV  V QLK L G    FG GS  +VTTR
Sbjct: 259 LNTKNKIHSPALGTTKIEKRFQGKKLLVVLDDVTTVEQLKALCGNPRLFGPGSVFIVTTR 318

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           D R+L   + +   +  +  +E ++  E F   AF++    ++ +  SR+VV+Y  G PL
Sbjct: 319 DARLLNLVKVD--YVCTMKEMEEKDPLELFSWHAFRQPSPIKNFSELSRTVVAYCGGLPL 376

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFLDIAC 243
            LEV+GS L  + K  W  VL  L RI   ++ +    L+IS++ L   + K IFLDI C
Sbjct: 377 ALEVIGSYLYGRTKQEWESVLLKLERIPNDQVQEK---LRISYDGLKDDMAKDIFLDICC 433

Query: 244 FFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQES 299
           FF G+D+ +V  IL+     +D+ + +L+++SLV I   N L MHD+L++MGR+IVRQ S
Sbjct: 434 FFIGKDRAYVTEILNGCGLYADIGITVLVERSLVKIEKNNKLGMHDLLRDMGREIVRQSS 493

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
            K PGKRSRLW  +++  VL  N                                 +F+F
Sbjct: 494 AKNPGKRSRLWFHEDVHDVLTKNT--------------------------------VFRF 521

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
               F E   +  +   + L    V L      + K+LR++    + L  +P +F  +NL
Sbjct: 522 CTDSFME---MKQLKQLKLLQLDCVDLAGDYGCISKQLRWVSVQGFTLNCIPDDFYQENL 578

Query: 420 VELNLRCSKVEQPWEGEKACVPSSIQNFKY---------------LSALSFKGCQSLRSF 464
           V L+L+ SK++Q W          I N  +               L  L  K C SL   
Sbjct: 579 VALDLKHSKIKQVWNETMFLEKLKILNLSHSRYLKHTPDFSKLPNLEKLIMKDCPSLSEV 638

Query: 465 PSNLHFVCPV-TINFSYCVNLIEFPQ----------ISGKVTRLYLGQSAIEEVP 508
             ++  +  V  IN   C +L   P+              +T L    +A++EVP
Sbjct: 639 HQSIGDLKNVLLINLKDCTSLSNLPRNIYQLEEDIMQMKSLTTLIANDTAVKEVP 693



 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 24/221 (10%)

Query: 516 DLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKR-IYSDRTP 574
           +L  LDL+  K +K++      L  L  L L     L+H P+   K+ +L++ I  D   
Sbjct: 577 NLVALDLKHSK-IKQVWNETMFLEKLKILNLSHSRYLKHTPD-FSKLPNLEKLIMKDCPS 634

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE-------YLYYILAAASAISQLPS 627
           ++E+  S  +L  + ++ ++DC+ L NLP NI  LE        L  ++A  +A+ ++P 
Sbjct: 635 LSEVHQSIGDLKNVLLINLKDCTSLSNLPRNIYQLEEDIMQMKSLTTLIANDTAVKEVPC 694

Query: 628 SVALSNMLRSLDSSHCKGL--ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLS---S 682
            +  S  +  L     +GL  + FP      +S           +  +P+   + +   S
Sbjct: 695 LLVRSKSIGYLSLCRYEGLSCDVFPSLIWSWMSP---------TLNSLPRTSPFGNISLS 745

Query: 683 LEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL 723
           L    +  NN   L  +I+ +S+LR + ++  + +Q   EL
Sbjct: 746 LSSTDIHNNNLGFLSPMIRSLSKLRTVWVQCRSKVQLTQEL 786


>gi|224085411|ref|XP_002307568.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222857017|gb|EEE94564.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 541

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/320 (42%), Positives = 202/320 (63%), Gaps = 14/320 (4%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           V+IVGI+GMGGIGKTT+AK +++   HEFEGSCF+ +VR  S  + G+  LQ+Q+LS TL
Sbjct: 212 VRIVGIYGMGGIGKTTVAKKVYNLVFHEFEGSCFLENVRKES-ISKGIACLQRQLLSETL 270

Query: 67  SEKLEVAGPNIP---HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTT 123
             K E    NI    +  ++R+ R ++ IVLDD++E+ QL +++G  D    GSR+++TT
Sbjct: 271 KRKHEKI-DNISRGLNVIRDRLHRKRIFIVLDDIDELEQLNKILGNFDWLFPGSRVIITT 329

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNP 183
           R K +L+    E    Y V  L  +++ +     AF E+H  ++     R +VSY +G P
Sbjct: 330 RIKDLLQP--SELYLQYEVEELNNDDSLQLLRLHAFNEHHPVDNYMDCMRRIVSYVRGIP 387

Query: 184 LVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIAC 243
           L LEVLGSSLC +  + W   L  L  I   +IH   + LKIS + L    K IFLDIAC
Sbjct: 388 LALEVLGSSLCGQTINVWNSKLEKLKVIGNGDIH---NKLKISNDSLDDTEKFIFLDIAC 444

Query: 244 FFEGEDKDFVASILDDSE---SDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQES 299
           FF G +KD++ SIL+D     +D ++ L+ + +V +   N L+MHD+L++MGR+IVRQES
Sbjct: 445 FFIGFNKDYIMSILEDCGFFPADGINTLMRRCIVKVGPDNKLSMHDLLRDMGREIVRQES 504

Query: 300 EKEPGKRSRLWDPKEISRVL 319
             +PG+RSRLW  +++  V+
Sbjct: 505 STDPGERSRLWRQEDVIDVI 524


>gi|4588056|gb|AAD25969.1|AF093642_1 flax rust resistance protein [Linum usitatissimum]
          Length = 1581

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 250/879 (28%), Positives = 402/879 (45%), Gaps = 147/879 (16%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S+ V +VG++GMGGIGKTT AKA++++ S  F+  CF+ ++R   +   G+  LQK+++S
Sbjct: 255  SENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDRCCFIDNIRETQDQKDGVVVLQKKLVS 314

Query: 64   TTLSEKLEVAGPNIP----HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
              L       G N         KERV R K+L+VLDDV+E  + + ++G    F   SR 
Sbjct: 315  EILRIDSGSVGFNNDSGGRKMIKERVSRFKILVVLDDVDEKFKFEDMLGSPKDFISQSRF 374

Query: 120  VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
            ++T+R  RVL      + K+Y V  +    + E F   AFK+N  P D    +  VV  T
Sbjct: 375  IITSRSMRVLGTLNENQCKLYEVGSMSKPRSLELFSKHAFKKNTPPSDYEILANDVVDTT 434

Query: 180  KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
             G PL L+V+GS L  ++   W   L  L +     + ++YD LKIS++ L P  K IFL
Sbjct: 435  AGLPLTLKVIGSLLFKQKIGVWEDTLEQLRKTL--NLDEVYDRLKISYDALKPEAKEIFL 492

Query: 240  DIACFFEGEDKDFVASILDDSE---SDVLDILIDKSLVSISGN-FLNMHDILQEMGRQIV 295
            DIACFF GE K+    +  D     +  +  LI + ++ +  N    MHD L++MGR+IV
Sbjct: 493  DIACFFIGEKKEEPYYMWTDCNFYPASNITFLIQRCMIQVGNNDEFKMHDQLRDMGREIV 552

Query: 296  RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRA--FTNMSN 353
            R+E  + P KRSR+W  +E   +L + KG+  ++ I    S I G + + ++  F N+S 
Sbjct: 553  RREDVR-PWKRSRIWSAEEGIDLLLNKKGSSKVKAI----SIICGADYEFKSECFLNLSE 607

Query: 354  LR-LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
            LR L+  +     +   L               LPN L +L   +     D  PL    +
Sbjct: 608  LRYLYATFAMLTGDFNNL---------------LPN-LKWLELPVYDHGEDDPPL----T 647

Query: 413  NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
            NF  KNL+ + L  S++                     +A  + G +++   P  L  V 
Sbjct: 648  NFTMKNLIIVILEYSRI---------------------TADDWGGWRNMMKMPERLKVV- 685

Query: 473  PVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEV----LDLRGCKRL 528
             ++ N+S           SG++ RL    S     P SIE L+  E+    +D+   K+L
Sbjct: 686  RLSSNYSS----------SGRLFRL----SGCWRFPKSIEILSMTEIEMDEVDIGELKKL 731

Query: 529  KRISTSFCK-----------LRSLVTLILLG--CLNL-EHFPEI--LEKMEHLKRIYSDR 572
            K +    CK           L+ L+ L LL   C NL E   +I  L  ++ LK +  + 
Sbjct: 732  KTLVLGLCKIQKISGGTFGMLKGLIELDLLSLKCTNLREVVADIGQLSSLKVLKTLEVEE 791

Query: 573  TPITELPSSFENLP------------GLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAAS 620
              I E PS  + L              LEVL V DC    ++P    S E    +    S
Sbjct: 792  VEIKEFPSGLKELSTSSRIPNLSQLLDLEVLVVYDCKDGIDMPPASPS-EDESSVWWKVS 850

Query: 621  AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFL-LGLSAMGLLHISDYAVREIPQEIAY 679
             +  L       N+   +D +   G    PR  L   L+++ +   ++       + +  
Sbjct: 851  KLKSLQLEKTRINV-NVVDDASSGG--HLPRYLLPTSLTSLKIDRCTEPTWLPGIENLEN 907

Query: 680  LSSLE---ILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC-----LKYLH 731
            L+SLE   I    G + + L   ++ +  LR   +     ++ L +L LC     L+ L+
Sbjct: 908  LTSLEVNDIFQTLGGDLDGLQG-LRSLEILRIRKVNGLARIKGLKDL-LCSSTCKLRKLY 965

Query: 732  LIDC-KMLQSLP--------VLPFCLESLDLTGC------NMLRSLPELPLCLQYLNL-- 774
            + +C  +++ LP        V+P   E L ++ C       M+RSLP+ P+ L+ L+L  
Sbjct: 966  IRECPDLIELLPCELGGQTVVVPSMAE-LTISDCPRLEVGPMIRSLPKFPM-LKKLDLAV 1023

Query: 775  ------EDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEI 807
                  ED + + SL EL + L+L+    C+ ++ +  +
Sbjct: 1024 ANITKEEDLDAIGSLEEL-VRLELVLDDTCSGIERIASL 1061



 Score = 46.6 bits (109), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 30/244 (12%)

Query: 534  SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTP-ITELPSSFENLPGLEVLF 592
               +L+SL  LIL+GC +L   P     +E LK +     P + EL  +   +P L  L 
Sbjct: 1082 GLAELKSLQRLILVGCTSLGRLP-----LEKLKELDIGGCPDLAELVQTVVAVPSLVELT 1136

Query: 593  VEDCSKLD------NLPD--NIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
            + DC +L+      +LP    +  L      +     ++ L S   L +++  LD + C 
Sbjct: 1137 IRDCPRLEVGPMIQSLPKFPMLNKLTLSMVNITKEDELAVLGSLEELDSLVLKLDDT-CS 1195

Query: 645  GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQM 703
            G+E    +FL  L  +  L +   ++REI + +A L SL+ L L G  +   LP  ++++
Sbjct: 1196 GIERI--SFLSKLQKLTTLVVEVPSLREI-EGLAELKSLQRLILVGCTSLGRLP--LEKL 1250

Query: 704  SQLRFIHLEDF-NMLQSLPELPLCLKYLHLIDC------KMLQSLPVLPFCLESLDLTGC 756
             +L      D   ++Q++  +P  L  L + DC       M+QSLP  P  L  L L+  
Sbjct: 1251 KELDIGGCPDLAELVQTVVAVP-SLVELTIRDCPRLEVGPMIQSLPKFPM-LNKLMLSMV 1308

Query: 757  NMLR 760
            N+ +
Sbjct: 1309 NITK 1312


>gi|13509219|emb|CAC35329.1| N1-C protein [Linum usitatissimum]
          Length = 1120

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 251/861 (29%), Positives = 401/861 (46%), Gaps = 126/861 (14%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +DSS + +I+GI GMGG+GKTTLAKA++D+ S +FE   F+ ++R       G+  LQ +
Sbjct: 227  LDSSTSEKIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENIRDTLSEKNGVSILQNK 286

Query: 61   MLSTTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            ++S  L +    A    +     ++RV R KLLIVLDDV+E  Q   ++G+L+ F   SR
Sbjct: 287  IISGILRKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQFDDVLGKLNNFSTNSR 346

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
             ++TTRD R LE    +E K++ +  +  + +   F   AF  +  P+D    S+  V  
Sbjct: 347  FLITTRDARGLELL--QEYKMFELQEMSPDHSLTLFNKHAFDVDCPPKDYAILSKEFVQA 404

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL ++V+GS L    K  W + L +  +I  +++ +    LKIS+N+LT   K IF
Sbjct: 405  AAGLPLYIKVIGSLLFRMDKIFWEEKLEEFKKISPTKVQER---LKISYNELTYNEKQIF 461

Query: 239  LDIACFFEGEDKDFVASILDDSESDV-----LDILIDKSLVSISG--------NFLNMHD 285
            LDIAC+F G  K  +  IL  ++ D+     +  L  +SL+ +          N   MHD
Sbjct: 462  LDIACYFIGSVK--IEPILMWNDCDLYPESTIRSLTQRSLIKLQRSEMKGDDVNTFQMHD 519

Query: 286  ILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDP 345
             ++++GR IVR+E+ ++P KRSR+W  K+   +LKH KGTD +E + +D+   +G +L  
Sbjct: 520  HVRDLGRAIVREENNQKPYKRSRIWSNKDAIDMLKHKKGTDCVEVLTVDM---EGEDL-- 574

Query: 346  RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGL-DYLPKKLRYLHWDT 404
               TN               E+EKL  +     LS S  +L     D LP  LR+L    
Sbjct: 575  -ILTNK--------------ELEKLTRL---RYLSVSNARLAGDFKDVLP-NLRWLR--L 613

Query: 405  YPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSF 464
            +   ++P+      LV+L L    V   W+G      + ++    L A++ + C  L+  
Sbjct: 614  HSCDSVPTGLYLNKLVDLELVDCSVRDGWKG-----WNELKVAHKLKAVTLERCFHLKKV 668

Query: 465  P-----SNLHFVCPVTINFSYCVNLIEFPQISG-KVTRLY-LGQSAIEEVPSSIECLTDL 517
            P      +L F     +NF  C N+     I   K  R + +  + I ++   I  L +L
Sbjct: 669  PDFSDCGDLEF-----LNFDGCRNMRGEVDIGNFKSLRFFQIADTKITKIKGEIGRLLNL 723

Query: 518  EVLDLRGCKRLKRISTSFCKLRSL--VTLILLGCLNLEHFPEILEKMEHLKRIYSDRT-- 573
            + L +     LK +     KL SL  ++L L     L+ F E+L     +  I +D    
Sbjct: 724  KYLIVDDSS-LKEVPAGISKLSSLKWLSLTLTDPYKLD-FTEMLPASLRILLISNDTQKS 781

Query: 574  -PITELPS-----SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPS 627
             P T L +     +  NL  L VLF+ D    + L   +G L+ L Y++     I + P 
Sbjct: 782  CPDTSLENLQRLPNLSNLINLSVLFLMDVGIGEIL--GLGELKMLEYLI-----IERAPR 834

Query: 628  SVALSN-----MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD----YAVREIPQEIA 678
             V L       +L+ L    C  L   P   L+ L  +  L I D      +  + Q   
Sbjct: 835  IVHLDGLENLVLLQQLRVEGCPVLGKLPS--LVALIRLEKLWIEDCPLVTEIHGVGQHWE 892

Query: 679  YLSSLEILYLSG-NNFESLPAIIK------QMSQLRFIHLEDFNMLQSLPELPLC----L 727
             LS L ++  S     ++L +++K      +  +L    L   +++  L +L L      
Sbjct: 893  SLSDLRVVGCSALTGLDALHSMVKLEYLVLEGPELTERVLSSLSIITKLVKLGLWHMSRR 952

Query: 728  KYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELP 787
            ++  L + K L+ L  L FC E +++ G + L S       L+YL L  C  +R LP+L 
Sbjct: 953  QFPDLSNLKNLRELS-LSFCEELIEVPGLDALES-------LEYLFLNGCLSIRKLPDLS 1004

Query: 788  -----------LCLQLLTVRN 797
                        C+QL  VR 
Sbjct: 1005 GLKKLKKLDVEGCIQLKEVRG 1025


>gi|297788454|ref|XP_002862328.1| hypothetical protein ARALYDRAFT_497514 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297307728|gb|EFH38586.1| hypothetical protein ARALYDRAFT_497514 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 721

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 190/645 (29%), Positives = 307/645 (47%), Gaps = 120/645 (18%)

Query: 81  TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIY 140
            ++R+   ++LIVLD +++  QL  +  E   FG GSRI++TT+D+R+L K  G    IY
Sbjct: 5   AQDRLNDKRVLIVLDSIDQSIQLDAIAKETRWFGHGSRIIITTQDQRLL-KAHGI-NHIY 62

Query: 141 RVNGLEFEEAFEHFCNFAFKENHCP---EDLNWHSRSVVSYTKGN-PLVLEVLGSSLCLK 196
           +V      EA++ FC +AF +N      E+L W     V+   GN PL L V+GS     
Sbjct: 63  KVEFPSAYEAYQMFCMYAFDQNFPKDGFEELAWQ----VTKLLGNLPLGLRVMGSHFRGM 118

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFF--EGEDKDFVA 254
            +  W   L  L    ++ I  I   LK S++ L    K +FL IAC F  +G  KD++A
Sbjct: 119 SRHEWVNALPRLKIRLDASIQSI---LKFSYDALCDEDKDLFLHIACLFNNDGMVKDYLA 175

Query: 255 -SILDDSESDVLDILIDKSLVSI---SGNF--LNMHDILQEMGRQIVRQESEKE----PG 304
            S LD  +   L +L +KSL+++   S ++  + MH++L ++GR IVR +   +    PG
Sbjct: 176 LSFLDVRQG--LHLLAEKSLIALEIFSADYTHIKMHNLLVQLGRDIVRHKPGHQSICAPG 233

Query: 305 KRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKG-INLDPRAFTNMSNLRLFKFYVPK 363
           KR  L D ++I  VL  N G+  + GI  ++  + G +N+  RAF  MSNL+  +F+ P 
Sbjct: 234 KRQFLVDARDICEVLTDNTGSRNVIGILFEVYTLSGELNISERAFEGMSNLKFLRFHGP- 292

Query: 364 FYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELN 423
            Y+ +              K+ LP GL+ LP+KLR + W  +P++ LPSNF  K LV ++
Sbjct: 293 -YDGQS------------DKLYLPQGLNNLPRKLRLIEWSRFPMKCLPSNFCTKYLVHID 339

Query: 424 LRCSKVEQPWEGEK---------------------------------------ACVPSSI 444
           +  SK+E  W+G +                                       A +PSS+
Sbjct: 340 MWNSKLENLWQGNQPLGNLKRMDLRESKHLKELPNLSTATNLENLTLFGCSSLAELPSSL 399

Query: 445 QNFKYL--------SALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTR 496
            N + L        S L  +GC  L + P+N++      ++ + C+ +  FP+IS  +  
Sbjct: 400 GNLQKLQELRLQGCSTLDLQGCSKLEALPTNINLESLNNLDLTACLLIKSFPEISTNIKD 459

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLK--------------------RISTSFC 536
           L L ++AI+EVPS+I+  + L  L++     LK                     I     
Sbjct: 460 LMLMKTAIKEVPSTIKSWSHLRNLEMSYNDNLKEFPHALDIITKLYFNDTEIQEIPLWVK 519

Query: 537 KLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDC 596
           K+  L TL+L GC  L   P++ + + ++  I  +   +  L  SF N P   + F+ +C
Sbjct: 520 KISRLQTLVLKGCKRLVTIPQLSDSLSNV--IAINCQSLERLDFSFHNHPERYLRFI-NC 576

Query: 597 SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSS 641
            KL+N        E   +I  ++S  + LP+    +N     + S
Sbjct: 577 FKLNN--------EAREFIQTSSSTSAFLPAREVPANFTYRANGS 613



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 65/264 (24%)

Query: 499 LGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEI 558
           +  S +E +    + L +L+ +DLR  K LK +  +     +L  L L GC         
Sbjct: 340 MWNSKLENLWQGNQPLGNLKRMDLRESKHLKELP-NLSTATNLENLTLFGC--------- 389

Query: 559 LEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA 618
                         + + ELPSS  NL  L+ L ++ CS LD               L  
Sbjct: 390 --------------SSLAELPSSLGNLQKLQELRLQGCSTLD---------------LQG 420

Query: 619 ASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEI- 677
            S +  LP+++ L + L +LD + C  ++SFP       + +  L +   A++E+P  I 
Sbjct: 421 CSKLEALPTNINLES-LNNLDLTACLLIKSFPEIS----TNIKDLMLMKTAIKEVPSTIK 475

Query: 678 --AYLSSLEI------------------LYLSGNNFESLPAIIKQMSQLRFIHLEDFNML 717
             ++L +LE+                  LY +    + +P  +K++S+L+ + L+    L
Sbjct: 476 SWSHLRNLEMSYNDNLKEFPHALDIITKLYFNDTEIQEIPLWVKKISRLQTLVLKGCKRL 535

Query: 718 QSLPELPLCLKYLHLIDCKMLQSL 741
            ++P+L   L  +  I+C+ L+ L
Sbjct: 536 VTIPQLSDSLSNVIAINCQSLERL 559



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 97/413 (23%), Positives = 157/413 (38%), Gaps = 73/413 (17%)

Query: 559 LEKMEHLKRI-----YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
            E M +LK +     Y  ++    LP    NLP    L       +  LP N  + +YL 
Sbjct: 278 FEGMSNLKFLRFHGPYDGQSDKLYLPQGLNNLPRKLRLIEWSRFPMKCLPSNFCT-KYLV 336

Query: 614 YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPR-TFLLGLSAMGLLHISDYAVRE 672
           +I    S +  L         L+ +D    K L+  P  +    L  + L   S  A  E
Sbjct: 337 HIDMWNSKLENLWQGNQPLGNLKRMDLRESKHLKELPNLSTATNLENLTLFGCSSLA--E 394

Query: 673 IPQEIAYLSSLEILYLSG---------NNFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL 723
           +P  +  L  L+ L L G         +  E+LP  I  +  L  + L    +++S PE+
Sbjct: 395 LPSSLGNLQKLQELRLQGCSTLDLQGCSKLEALPTNI-NLESLNNLDLTACLLIKSFPEI 453

Query: 724 PLCLKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLR 781
              +K L L+   + +    +     L +L+++  + L+  P     +  L   D     
Sbjct: 454 STNIKDLMLMKTAIKEVPSTIKSWSHLRNLEMSYNDNLKEFPHALDIITKLYFNDT---- 509

Query: 782 SLPELPLC------LQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPES 835
            + E+PL       LQ L ++ C RL ++P++   L  + A   + L +        PE 
Sbjct: 510 EIQEIPLWVKKISRLQTLVLKGCKRLVTIPQLSDSLSNVIAINCQSLERLDFSFHNHPER 569

Query: 836 LKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLI 895
                    F NC KLN +A   I   S                             +  
Sbjct: 570 Y------LRFINCFKLNNEAREFIQTSS----------------------------STSA 595

Query: 896 VLPGSEIPDWFSNQSSGSSICIQL---PPHSSCRNLIGFAFCAVLDSKKVDSD 945
            LP  E+P  F+ +++GS I + L   P  ++ R    F  C +LD KKVD+D
Sbjct: 596 FLPAREVPANFTYRANGSFIMVNLNQRPLSTTLR----FKACVLLD-KKVDND 643


>gi|358348505|ref|XP_003638286.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355504221|gb|AES85424.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1074

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 178/543 (32%), Positives = 284/543 (52%), Gaps = 46/543 (8%)

Query: 2   DSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAG-GLEHLQKQ 60
           + S  V ++GIWGMGG GKTT A A ++QF  +F    F+ ++R   E  G G  HL++Q
Sbjct: 209 NQSSKVCLIGIWGMGGSGKTTTATAFYNQFHGKFVVHRFIENIREVCEKEGRGNIHLKQQ 268

Query: 61  MLSTTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
           +L   +               ++R  R K L+VLDDV+ + Q+  L G+   FG GS ++
Sbjct: 269 LLLDNMKT------------IEKRFMREKALVVLDDVSALEQVNALCGKHKCFGTGSVLI 316

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           VT+RD R+L+    E   +Y +  ++  E+ E F   AF+++   ED N  SRS++ Y  
Sbjct: 317 VTSRDVRILKLL--EVDHVYSMTEMDEYESLELFNLHAFRKSSAKEDFNQLSRSIIDYCG 374

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSIFL 239
           G PL LE +GS L  + K  W   L +L RI   ++      LKIS++ L     + IFL
Sbjct: 375 GLPLALEEIGSYLFDRTKQQWKSTLSNLRRIPNDKVQKK---LKISYDGLDCDSERGIFL 431

Query: 240 DIACFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSISGN-FLNMHDILQEMGRQIV 295
           DI CFF G+ + +V+ ILD     +D+ + ILI++SL+ +  N  L MH +L++MGR+IV
Sbjct: 432 DICCFFIGKKRAYVSEILDGCGLNADMGITILIERSLLKVEKNDKLGMHGLLRDMGREIV 491

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
            + SE+E GKRSRLW  +++  VL  N GT  +EG+ L     + ++ +  +F  M+NLR
Sbjct: 492 CKRSEEELGKRSRLWSDEDVHDVLNQNCGTKFVEGLVLKSQSTENVSFNADSFKKMNNLR 551

Query: 356 LFKF----YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWD-TYPLRTL 410
           L +         FY+ E L       +L +S ++L      L  KL+ L+   +  L + 
Sbjct: 552 LLQLDHVDLTGDFYQ-ENLAVF----ELKHSNIKLVWNETKLMNKLKILNLSHSKHLTST 606

Query: 411 PSNFKPKNLVELNLR-CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLH 469
           P   K  NL +L ++ C  + +        +  SI + K +  L+ K C SL S P  ++
Sbjct: 607 PDFSKLPNLEKLIMKNCPNLSK--------LHHSIGDLKNILLLNLKDCTSLASLPEVIY 658

Query: 470 FVCPV-TINFSYCVNLIEFPQ---ISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
            +  + T+ FS C  + +  +       +T L    + ++E+P SI  L  +  + L GC
Sbjct: 659 QLKSLKTLIFSGCSKIDKLEEDIVQMESLTTLIAKDTGVKEMPYSILGLKGIAYISLCGC 718

Query: 526 KRL 528
           + L
Sbjct: 719 EGL 721



 Score = 40.0 bits (92), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 5/123 (4%)

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAA-ASAISQLPSSVALSNMLRSLDS 640
           F  LP LE L +++C  L  L  +IG L+ +  +     ++++ LP  +     L++L  
Sbjct: 609 FSKLPNLEKLIMKNCPNLSKLHHSIGDLKNILLLNLKDCTSLASLPEVIYQLKSLKTLIF 668

Query: 641 SHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYL---SGNNFESLP 697
           S C  ++      ++ + ++  L   D  V+E+P  I  L  +  + L    G +FE LP
Sbjct: 669 SGCSKIDKLEED-IVQMESLTTLIAKDTGVKEMPYSILGLKGIAYISLCGCEGLSFEVLP 727

Query: 698 AII 700
           ++I
Sbjct: 728 SVI 730


>gi|242276423|gb|ACS91453.1| M3 [Linum usitatissimum]
          Length = 1293

 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 248/866 (28%), Positives = 399/866 (46%), Gaps = 114/866 (13%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S +V +VG++GMGGIGKTT AKA++++ S  F+  CFV +VR   E   G+ +LQK+++S
Sbjct: 255  SKSVTMVGLYGMGGIGKTTTAKAVYNKISSHFDRCCFVDNVRAMQEQKDGIFNLQKKLVS 314

Query: 64   TTLSEKLEVAG----PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
              L  +++  G           KERV + K+L+VLDDV+E  + + ++G  + F  G+R 
Sbjct: 315  EIL--RMDSVGFTNDSGGRKMIKERVSKSKILVVLDDVDEKFKFEDILGCPNDFDYGTRF 372

Query: 120  VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
            ++T+R++ VL      + K+Y V  +   ++ E F   AFK+N  P D    +  +VS T
Sbjct: 373  IITSRNQNVLSHLNENQCKLYEVGSMSQPDSLELFSKHAFKKNTPPSDYETLANEIVSTT 432

Query: 180  KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
             G PL L+V GS L  +    W   L  L +     + ++YD LKIS++ L    K IFL
Sbjct: 433  GGLPLTLKVTGSFLFGQEIGVWEDTLEQLRKTL--NLDEVYDRLKISYDALKVEAKEIFL 490

Query: 240  DIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQI 294
            DIACFF G +K+    +  D     +S+++  LI + ++ +  +    MHD L++MGR+I
Sbjct: 491  DIACFFIGRNKEQPYYMWSDCNLYPKSNII-FLIQRCMIQVGDDGVFQMHDQLRDMGREI 549

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            VR+E  + P KRSR+W  +E   +L   KG+  ++ I +  S +K        F N+S L
Sbjct: 550  VRREDVERPWKRSRIWSSEEGIDLLLKKKGSSKVKAISIPESGVK-YEFKSECFLNLSEL 608

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP--LRTLP- 411
            RLF                        +   L    + L   L++LH   Y   L   P 
Sbjct: 609  RLF---------------------FVGANTLLTGDFNNLLPNLKWLHLPGYAHGLYDPPV 647

Query: 412  SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFV 471
            +NF  KNLV L L  S  E  W       P  ++  +  S   F G              
Sbjct: 648  TNFTMKNLVILFLANSGRE--WSHMIKMAP-RLKVVRLYSNYGFSG-------------- 690

Query: 472  CPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRI 531
                   S+C     FP+    +  L L +  I+EV   I  L  L+ LDL  C+  K  
Sbjct: 691  -----RLSFC---WRFPK---SIEVLSLFRIEIKEV--DIGELKKLKTLDLTSCRIQKIS 737

Query: 532  STSFCKLRSLVTLIL--LGCLNL-EHFPEI--LEKMEHLKRIYSDRTPITELP------S 580
              +F  L+ L+ L L  + C +L E   ++  L  ++ LK   +    + E P      S
Sbjct: 738  GGTFGMLKGLIELHLNYIKCTDLREVVADVGQLSSLKVLKTAGAKEVEMNEFPLGLKELS 797

Query: 581  SFENLPGLEVLFVEDCSKLDNLPDNI-----GSLEYLYYILAAASAISQLPSSVALSNML 635
            +   +P L  L   +  K+ +  D I      S E    +    S +  L       N +
Sbjct: 798  TSSRIPNLLDLLDLEELKVYDCKDGIDIPPANSTEDEGSVWWKVSKLKSLKLRNTRIN-I 856

Query: 636  RSLDSSHCKGLESFPRTFL-LGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLS---GN 691
            + +D +   G    PR  L   L+++ +   S+       + +  L+SLE+  +    G 
Sbjct: 857  KVVDDASSGG--HLPRYLLPTSLTSLKINSCSEPTWLPGIENLENLTSLEVYNVFQTLGG 914

Query: 692  NFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC-----LKYLHLIDCKMLQSLPVLPF 746
            + + L   ++ +  LR   +     ++ L +L LC     L+ L +  C  L    +LPF
Sbjct: 915  DLDGLHG-LRSLEILRIWKVNGLVRIKGLKDL-LCSSTCKLRKLEVEACHDLTE--ILPF 970

Query: 747  CLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQL-LTVRNCNR----- 800
                LD     ++ SL EL + +    LE   M+RSLP+LP+  +L L V N  +     
Sbjct: 971  ---ELDDQTVVVVPSLVELTI-MDCPRLEVGPMIRSLPKLPMLKKLFLAVGNITKEEDVD 1026

Query: 801  -LQSLPEILLCLQELD--ASVLEKLS 823
             + SL E++    ELD  +S +E+++
Sbjct: 1027 VIGSLEELVDLWLELDDTSSGIERIA 1052


>gi|359477825|ref|XP_002282820.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1292

 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 155/426 (36%), Positives = 229/426 (53%), Gaps = 37/426 (8%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+AKAI+++ S++++GS F+ ++R  S+  G +  LQ+++L   L  K      NI  
Sbjct: 227 KTTIAKAIYNEISYQYDGSSFLKNIRERSK--GDILQLQQELLHGILKGK-NFKVNNIDE 283

Query: 80  ---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
                K  +   ++L++ DDV+E+ QL+ L  E D F   S I++T+RDK+VL ++  + 
Sbjct: 284 GISMIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDWFEAKSTIIITSRDKQVLAQYGVDI 343

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLK 196
              Y V+ L  +EA E F  +AF+ N   E     S +++ Y  G PL L+VLG SL  K
Sbjct: 344 S--YEVSKLNKKEAIEVFSLWAFQHNLPKEVYKNLSYNIIDYANGLPLALKVLGGSLFGK 401

Query: 197 RKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASI 256
            +S W   L  L  I   EIH++   L+ISF+ L    K IFLD+ACFF+G DKD+V+ I
Sbjct: 402 TRSEWESALCKLKTIPHMEIHNV---LRISFDGLDDVDKGIFLDVACFFKGNDKDYVSRI 458

Query: 257 LDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEIS 316
           L       +  L D+ L++IS N L+MHD++Q+MG +I+RQE  +  G+RSRLWD  +  
Sbjct: 459 LGPYAEYGITTLDDRCLLTISKNMLDMHDLIQQMGWEIIRQECLENLGRRSRLWD-SDAY 517

Query: 317 RVLKHNKGTDAIEGIFLDLSKIKGI-----NLDPRAFTNMSNLRLFKFYVPKFYEIEKLP 371
            VL  N  +D        L K  G      N D   F   S++                P
Sbjct: 518 HVLTRNM-SDPTPACPPSLKKTDGACLFFQNSDGGVFLEKSDMP---------------P 561

Query: 372 SMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQ 431
             S+  +     + L    ++   +L YL+WD YPL  LP NF  KNLVEL LR + ++Q
Sbjct: 562 PFSSRGR----DLPLFCDFEFSSHELTYLYWDGYPLEYLPMNFHAKNLVELLLRNNNIKQ 617

Query: 432 PWEGEK 437
            W G K
Sbjct: 618 LWRGNK 623



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 440  VPSSIQNFKYLS--ALSFKGCQSLRSFPSNLHFVCPVTI-----NFSYCVNLIEFPQISG 492
            + +S Q+F  +S  AL  K C     +  +L    P+TI     +   C    +   ++ 
Sbjct: 816  IGTSFQDFFNISEKALKVKECGVRLIYSQDLQQSHPLTIQTEDADVRICSECQQ--DVTC 873

Query: 493  KVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNL 552
            +  R + G S + EVP  +E   +L+ L LR CK L  + +S    +SL  L   GC  L
Sbjct: 874  RRKRCFKG-SDMNEVPI-MENPLELDSLCLRDCKNLTSLPSSIFGFKSLAALSCSGCSQL 931

Query: 553  EHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL-EY 611
            E FPEI++ ME L+++Y D T I E+PSS + L GL+ LF+  C  L NLP++I +L  +
Sbjct: 932  ESFPEIVQDMERLRKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSF 991

Query: 612  LYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLES--FPRTFLLGLSAMGLLHISDYA 669
               +++     ++LP ++     L+SL+      L+S  F    L GL ++ +L +    
Sbjct: 992  KTLVVSRCPNFNKLPDNLG---RLQSLEHLFVGYLDSMNFQLPSLSGLCSLRILMLQACN 1048

Query: 670  VREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKY 729
            +RE P EI YLSSL +LYL GN+F  +P  I Q+  L+   L    MLQ +PELP  L Y
Sbjct: 1049 LREFPSEIYYLSSLVMLYLGGNHFSRIPDGISQLYNLKHFDLSHCKMLQHIPELPSGLTY 1108

Query: 730  LHLIDC 735
            L    C
Sbjct: 1109 LDAHHC 1114



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 179/450 (39%), Gaps = 54/450 (12%)

Query: 597  SKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLG 656
            S ++ +P     LE     L     ++ LPSS+     L +L  S C  LESFP   +  
Sbjct: 882  SDMNEVPIMENPLELDSLCLRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPE-IVQD 940

Query: 657  LSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFN 715
            +  +  L++   A+REIP  I  L  L+ L+LS   N  +LP  I  ++  + + +    
Sbjct: 941  MERLRKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRCP 1000

Query: 716  MLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC-LESLDLTGCNMLRSLPELP-LC-LQYL 772
                LP+           +   LQSL  L    L+S++         LP L  LC L+ L
Sbjct: 1001 NFNKLPD-----------NLGRLQSLEHLFVGYLDSMNF-------QLPSLSGLCSLRIL 1042

Query: 773  NLEDCNMLRSLPELPLCLQLLTVR--NCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQ 830
             L+ CN LR  P     L  L +     N    +P+ +  L  L    L     H   LQ
Sbjct: 1043 MLQACN-LREFPSEIYYLSSLVMLYLGGNHFSRIPDGISQLYNLKHFDL----SHCKMLQ 1097

Query: 831  WAPESLKSAAICFEFTNCLKLNGKANNKILADSL-LRIRHMAIASLRLGYEMAINEKLSE 889
              PE L S     +  +C  L   ++   L  S   +     I  + +G    +   + E
Sbjct: 1098 HIPE-LPSGLTYLDAHHCTSLENLSSQSSLLWSSLFKCLKSQIQGVEVG--AIVQTFIPE 1154

Query: 890  LRGSLIVLPGSEIPDWFSNQSSGSSICIQLP-PHSSCRNLIGFAFCAVLDSKKVDSDCFR 948
              G         IP+W S+Q SG  I ++LP       + +GF  C++      ++   R
Sbjct: 1155 SNG---------IPEWISHQKSGFQITMELPWSWYENDDFLGFVLCSLHVPLDTETAKHR 1205

Query: 949  YFYVSFQFDLEIKT-LSETKHVDLGYNSRYIEDLIDSDRVILGFKPCLNVGFPDGYHHT- 1006
             F     FD +  + L +           Y ED  +S++  L +    N+  P  YH   
Sbjct: 1206 SFNCKLNFDHDSASFLLDVIRFKQSCECCYDED--ESNQGWLIYYSKSNI--PKKYHSNE 1261

Query: 1007 ----IATFKFFAERKFYKIKRCGLCPVYAN 1032
                 A+F   +  K  K++RCG   +YA+
Sbjct: 1262 WRTLKASFYGHSSNKPGKVERCGFHFLYAH 1291


>gi|449443187|ref|XP_004139362.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like
           [Cucumis sativus]
          Length = 902

 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 198/656 (30%), Positives = 316/656 (48%), Gaps = 106/656 (16%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ + + G++G+GG+GKTT+AKA++++ + EFEG CF+S++R  S   GGL   QK++L 
Sbjct: 174 SNGITMFGLYGVGGMGKTTIAKALYNKIADEFEGCCFLSNIREASNQYGGLVQFQKELLC 233

Query: 64  TTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             L +   +   N+P      + R+   K+L++LDDV+   QL+ L G  D FG GS+++
Sbjct: 234 EILMDD-SIKVSNLPRGITIIRNRLYSKKILLILDDVDTREQLQALAGGHDWFGHGSKVI 292

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
            TTR+K++L     +  K+  V GL+++EA E F    F+ +H        S+  V Y K
Sbjct: 293 ATTRNKQLLVTHGFD--KMQNVGGLDYDEALELFSWHCFRNSHPLNVYLELSKRAVDYCK 350

Query: 181 GNPLVLEVLGSSL-CLKRKSHWGKVLHDLNRICESEIH----DIYDILKISFNKLTPRVK 235
           G PL LEVLGS L  +   S++ ++L       E E H    DI D L+IS++ L   VK
Sbjct: 351 GLPLALEVLGSFLHSIGDPSNFKRILD------EYEKHYLDKDIQDSLRISYDGLEDEVK 404

Query: 236 SIFLDIACFFEGEDKDFVASILDDSESDVLDILIDKSLVSISG-NFLNMHDILQEMGRQI 294
            IF  I+C F  ED   V  ++       +  L++ SL++I   N + MH+I+Q+MGR I
Sbjct: 405 EIFCYISCCFVREDICKVKMMVXLCLEKGITKLMNLSLLTIGRFNRVEMHNIIQQMGRTI 464

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
              E+ K   KR RL    +   VL  NK   A++ I L+  K   +++D RAF  + NL
Sbjct: 465 HLSETSKSH-KRKRLLIKDDAMDVLNGNKEARAVKVIKLNFPKPTKLDIDSRAFDKVKNL 523

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            +          +E   + S+E           + L+YLP  LR+++W  +P  +LP+ +
Sbjct: 524 VV----------LEVGNATSSE----------SSTLEYLPSSLRWMNWPQFPFSSLPTTY 563

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             +NL+EL L       P+        SSI++F       +  C+ L+            
Sbjct: 564 TMENLIELKL-------PY--------SSIKHF----GQGYMSCERLKE----------- 593

Query: 475 TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
            IN S    L+E P +S  +                     +L+ L+L GC+ L ++  S
Sbjct: 594 -INLSDSNLLVEIPDLSTAI---------------------NLKYLNLVGCENLVKVHES 631

Query: 535 FCKLRSLVTLILLGCL-NLEHFPEILEKMEHLKRIYSDRTPITEL-PSSFENLPGLEVLF 592
              L  LV L     +   E FP  L K++ LK +      I E  P   E +  +E L 
Sbjct: 632 IGSLSKLVALHFSSSVKGFEQFPSCL-KLKSLKFLSMKNCRIDEWCPQFSEEMKSIEYLS 690

Query: 593 VEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS-SHCKGLE 647
           +        +P+ +         ++AA +IS       L++ +   DS  +CKG E
Sbjct: 691 I----GYSTVPEGV-------ICMSAAGSISLARFPNNLADFMSCDDSVEYCKGGE 735


>gi|359493383|ref|XP_002279002.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 945

 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 165/461 (35%), Positives = 247/461 (53%), Gaps = 35/461 (7%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTT+A AI+++ S++++GS F+  V+  SE       LQ ++L   L  K  +   NI  
Sbjct: 229 KTTVAMAIYNELSNQYDGSSFLRKVKERSER--DTLQLQHELLQDILRGK-SLKLSNIDE 285

Query: 80  FTKERVRRM---KLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
             K   R +   ++L+V DDV+ + QL+ L  E   FG  S I++TTRDK +L ++    
Sbjct: 286 GVKMIKRSLSSKRVLVVFDDVDNLKQLEYLAEEQGWFGAKSTIIITTRDKNLLAQYGVNI 345

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKEN---HCPEDLNWHSRSVVSYTKGNPLVLEVLGSSL 193
           +  Y V  L  EEA E F  +AF++N      +DL +    VV Y KG PL L+VLGS+ 
Sbjct: 346 E--YEVTTLNEEEAIELFSLWAFRQNLPNKVDQDLFYE---VVRYAKGLPLALKVLGSNF 400

Query: 194 CLKR-KSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDF 252
             K+ K  W   L  L +   S    IY +L+ S++ L    K IFLDIACFF+G+DKDF
Sbjct: 401 FDKKTKEEWKSALEKLKK---SSDERIYSVLRTSYDGLDSVDKDIFLDIACFFKGKDKDF 457

Query: 253 VASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDP 312
           V+ IL     + +  L DK L++IS N L+MHD++Q+MG  IV QE  K+PG RSRLW  
Sbjct: 458 VSRILGPYAKNGIRTLEDKCLITISANMLDMHDMVQQMGWNIVHQECPKDPGGRSRLWGS 517

Query: 313 KEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYE--IEKL 370
            +   VL  N GT AIEG+F+++S ++ I   P+AF  M  LRL K Y    Y+  +E L
Sbjct: 518 -DAEFVLTKNTGTQAIEGLFVEISTLEHIEFTPKAFEKMHRLRLLKVYQLAIYDSVVEDL 576

Query: 371 ----PSMSTEEQLSYSKVQLPNGLDYLP-KKLRYLHWDTYPLRTLPSN-FKPKNLVELNL 424
                ++ +        V+    LD      L+ LH  +  +R +P++ F   +L  LNL
Sbjct: 577 RVFQAALISSNAFKVFLVEDGVVLDICHLLSLKELHLSSCNIRGIPNDIFCLSSLEILNL 636

Query: 425 RCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
             +          + +P+ I    +L++L+ + C  L+  P
Sbjct: 637 DGNHF--------SSIPAGISRLYHLTSLNLRHCNKLQQVP 669



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 44/68 (64%)

Query: 663 LHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPE 722
           LH+S   +R IP +I  LSSLEIL L GN+F S+PA I ++  L  ++L   N LQ +PE
Sbjct: 611 LHLSSCNIRGIPNDIFCLSSLEILNLDGNHFSSIPAGISRLYHLTSLNLRHCNKLQQVPE 670

Query: 723 LPLCLKYL 730
           LP  L+ L
Sbjct: 671 LPSSLRLL 678



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 105/261 (40%), Gaps = 41/261 (15%)

Query: 692 NFESLPAIIKQMSQLRFIHLEDFNMLQSLPE----LPLCLKYLHLIDCKMLQSLPVLPFC 747
           + E  P   ++M +LR + +    +  S+ E        L   +     +++   VL  C
Sbjct: 544 HIEFTPKAFEKMHRLRLLKVYQLAIYDSVVEDLRVFQAALISSNAFKVFLVEDGVVLDIC 603

Query: 748 ----LESLDLTGCNMLRSLPELPLCL---QYLNLEDCNMLRSLPELPLCLQLLT---VRN 797
               L+ L L+ CN +R +P    CL   + LNL D N   S+P     L  LT   +R+
Sbjct: 604 HLLSLKELHLSSCN-IRGIPNDIFCLSSLEILNL-DGNHFSSIPAGISRLYHLTSLNLRH 661

Query: 798 CNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANN 857
           CN+LQ +PE+   L+ LD         H P       S           NCL       N
Sbjct: 662 CNKLQQVPELPSSLRLLDV--------HGPS-DGTSSSPSLLPPLHSLVNCL-------N 705

Query: 858 KILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSE-IPDWFSNQSSGSSIC 916
             + DS  RIR       R       ++      G  IV+PGS  IP W  N+  GS I 
Sbjct: 706 SAIQDSENRIR-------RNWNGAYFSDSWYSGNGICIVIPGSSGIPKWIKNKRKGSEIE 758

Query: 917 IQLPPHSSCRN-LIGFAFCAV 936
           I LP +    N  +GFA   V
Sbjct: 759 IGLPQNWHLNNDFLGFALYCV 779


>gi|227438227|gb|ACP30603.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1056

 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 174/557 (31%), Positives = 276/557 (49%), Gaps = 48/557 (8%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEH-LQKQML 62
           S+ V+++G+ G  GIGKTT A+ +++Q S +F+ + F+ ++RG+ E   G ++ L+ ++ 
Sbjct: 206 SEEVKVIGVVGPAGIGKTTTARVLYNQLSPDFQFNTFLENIRGSYEKPCGNDYQLKLRLQ 265

Query: 63  STTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
              LS+        + H    +E +   K+L+VLD+V+   Q++ +  +    G  S IV
Sbjct: 266 KNLLSQIFNKGDIEVLHLGRAQEMLSDKKVLVVLDEVDNWWQVEEMAKQRAWVGPESIIV 325

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TT D+++LE        IY +      E+ + FC +AF + + P++      S V+   
Sbjct: 326 ITTEDRKLLEALGLGIDHIYEMTYPISYESLQIFCQYAFGQKY-PDNGFESLASEVTCLA 384

Query: 181 GN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
           GN PL L V+GS L    +  W + L  L    + EI      L+ S+N L    +++FL
Sbjct: 385 GNLPLGLRVMGSYLRGMSRDKWIEALPWLRSTLDREIEST---LRFSYNALRDNERTLFL 441

Query: 240 DIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVR 296
            IACFF+G   D       +S  +V   L++L  KSL+SI    + MH +L++MGR+IV+
Sbjct: 442 HIACFFDGFKVDSFKRCCANSSLEVNHGLEVLAQKSLISIEKGRVKMHRLLRQMGREIVK 501

Query: 297 QESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRL 356
           ++S + PGK   L D KEIS VL  +  T  + GI L     + I ++  AF  M+NL+ 
Sbjct: 502 KQSMENPGKLQFLTDKKEISDVLDEDTATGNVLGIQLRWG--EKIQINRSAFQGMNNLQF 559

Query: 357 FKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKP 416
             F                    S++   +   LD LP  LR L+W   PLR  PS F  
Sbjct: 560 LYFE-------------------SFTTTCISEDLDCLPDNLRLLYWRMCPLRVWPSKFSG 600

Query: 417 KNLVELNLRCSKVEQPWEGEK--ACVP----SSIQNFKYLSALS---------FKGCQSL 461
           K LVEL +  SK E  WEG K   C+     S   N K +  LS            C +L
Sbjct: 601 KFLVELIMPNSKFEMLWEGTKPLPCLKIFDLSRSSNLKKVPDLSKATSLEELLLHHCGNL 660

Query: 462 RSFPSNLHFVCPV-TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVL 520
               S++     +  ++   C ++ +FP +S  +  L L  + I+EVP  I+ L  L  L
Sbjct: 661 LELTSSIGNATKLYRLDIPGCTHIKDFPNVSDSILELDLCNTGIKEVPPWIKNLLRLRKL 720

Query: 521 DLRGCKRLKRISTSFCK 537
            +R C++LK IS +  K
Sbjct: 721 IMRRCEQLKTISPNISK 737


>gi|357452851|ref|XP_003596702.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355485750|gb|AES66953.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 747

 Score =  223 bits (568), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 149/453 (32%), Positives = 232/453 (51%), Gaps = 50/453 (11%)

Query: 1   MDSSD-TVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQK 59
           +DS D   + +GIWGM GI KTTLA  ++D+ S++F+ SCF+ +V       GG   +QK
Sbjct: 259 LDSKDYEFRAIGIWGMAGIRKTTLASVLYDRVSYQFDASCFIENV-SKIYKDGGATAVQK 317

Query: 60  QMLSTTLSEK-LEVAGPN-IPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           Q+L  T+ EK LE   P+ I    ++R+   K L+VLD+ + + Q++ L    +  G+GS
Sbjct: 318 QILRQTIDEKNLETYSPSEISGIIRKRLCNKKFLVVLDNADLLEQMEELAINPELLGKGS 377

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           RI++TTRD                       +A + F   AFK           +  V+ 
Sbjct: 378 RIIITTRD---------------------INDARKLFYRKAFKSEDPTSGCVKLTPEVLK 416

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y +G PL + V+GS LC +  + W   L+   R+  +  +++ D+L++SF  L    + I
Sbjct: 417 YAQGLPLAVRVVGSFLCTRDANQWRDALY---RLRNNPDNNVMDVLQVSFEGLHSEDREI 473

Query: 238 FLDIACFFEGEDKDFVASILDD---SESDVLDILIDKSLVSISGNFLNMHDILQEMGRQI 294
           FL IACFF+GE +D+V  ILD         +  LI++S ++I  N + MH++LQE+G++I
Sbjct: 474 FLHIACFFKGEKEDYVKRILDACGLHPHIGIQSLIERSFITIRNNEILMHEMLQELGKKI 533

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           VRQ+   +PG  SRLW   +   V+    GT+ I  I LD  +        RA   +S +
Sbjct: 534 VRQQFPFQPGSWSRLWLYDDFYSVMMTETGTNNINAIILDQKEHISEYPQLRA-EALSIM 592

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
           R  K  +  F++                       L +L   L+YL W  YP  +LP NF
Sbjct: 593 RGLKILILLFHK------------------NFSGSLTFLSNSLQYLLWYGYPFASLPLNF 634

Query: 415 KPKNLVELNLRCSKVEQPWEGEKACVPSSIQNF 447
           +P  LVELN+  S +++ W+G K  V + +Q F
Sbjct: 635 EPFCLVELNMPYSSIQRLWDGHKEVVCTELQYF 667


>gi|224144411|ref|XP_002325281.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|224145731|ref|XP_002325746.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862156|gb|EEE99662.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862621|gb|EEF00128.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 526

 Score =  223 bits (568), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 135/315 (42%), Positives = 199/315 (63%), Gaps = 19/315 (6%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           S+ V++VG++GM GIGKTT+AKA+F+Q  H FEGS F+S+V+  +     +E LQ+Q+L 
Sbjct: 206 SNDVRVVGVYGMPGIGKTTIAKAVFNQLCHGFEGSSFISNVKEKT-----VEQLQEQLLC 260

Query: 64  TTL---SEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             L   + K++     + +  K+R R  ++L+VLDD +++ QL+ L+ E + FG GSRIV
Sbjct: 261 DILKPNTWKIDNVSKGV-NLMKDRFRNKRVLVVLDDFDQLKQLEALVRERNCFGPGSRIV 319

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRD+ +L +   + K  Y V  L   E+ + F   AFK+ H  ED    S ++V Y  
Sbjct: 320 ITTRDEHLLTQIEVDGK--YHVKELHQHESLQLFSLHAFKDTHPEEDYVELSNAIVDYAG 377

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL-TPRVKSIFL 239
           G PL LEVLGS L  +  S W   +  L +I   +I      L+ISF+ L   +VK++FL
Sbjct: 378 GVPLALEVLGSYLFRRNISVWKSAIKKLRKIPNRQIQ---KTLRISFDTLDDDKVKAMFL 434

Query: 240 DIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSISG-NFLNMHDILQEMGRQIV 295
           DIACFF G DK++V  ILD      D+ +DILI +SL+SI+  N LNMHD++++MGR+I 
Sbjct: 435 DIACFFIGWDKEYVVEILDGRGFFPDIGIDILIQRSLLSINDENELNMHDLIRDMGREIA 494

Query: 296 RQESEKEPGKRSRLW 310
           R+ S   PGKR+R+W
Sbjct: 495 REVSYDHPGKRNRIW 509


>gi|227438237|gb|ACP30608.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1373

 Score =  223 bits (567), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 185/669 (27%), Positives = 280/669 (41%), Gaps = 126/669 (18%)

Query: 7   VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTL 66
           ++ +GIWGM GIGKTTLAKA+FD  S  +E SCF+      + +  GL  L ++     L
Sbjct: 230 IRRIGIWGMPGIGKTTLAKAVFDDISGGYEASCFIKHF-DEAFSEKGLHRLLEEHFGKIL 288

Query: 67  SEKLEV-AGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRD 125
            E   V +    P    E +R+ + L+VLDDV      +  +G    FG GS I++T+RD
Sbjct: 289 KELPRVCSSITRPSLQGEILRKKRTLVVLDDVKNPLAAESFLGGFHWFGPGSLIIITSRD 348

Query: 126 KRVLEKFRGEE-KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
           K+V   +R  +   +Y V  L  +EA +      F  +   +     S  V+ Y +GNP 
Sbjct: 349 KQV---YRHRQINHVYEVRSLSEDEALQLLSQCVFGNDIRDQKRMELSMEVIDYARGNPF 405

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            L   G  L  K+ S        L      +IHD++     S+  L    K+IFLDIACF
Sbjct: 406 ALSFYGRELKGKKPSEMEATFLKLKLRTPYKIHDLF---SSSYKTLDDNEKNIFLDIACF 462

Query: 245 FEGEDKDFVASILDDS---ESDVLDILIDKSLVS--ISGNFLNMHDILQEMGRQIVRQES 299
           F GED D+V  +LD         +D+L++K L +  I G FL+   +L            
Sbjct: 463 FVGEDVDYVMQLLDGCGFFPHVGIDVLVEKCLGTEXIEGIFLDTSSLL------------ 510

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKF 359
                                                     ++ P  F NM NL     
Sbjct: 511 -----------------------------------------FDVKPTXFDNMLNLXFLXI 529

Query: 360 YVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNL 419
           Y         L               LP GL+ LP +LR LHW+ YP  +LP  F P +L
Sbjct: 530 YXXXHENXXGL--------------GLPRGLESLPYELRLLHWENYPSESLPQEFDPCHL 575

Query: 420 VELNLRCSKVEQPWEGEKA---------CVPSSIQNFKYLSA------LSFKGCQSLRSF 464
           VELN+  S +++ WEG K          C    +     LS       +   GC  L+ F
Sbjct: 576 VELNMSYSHLQKLWEGTKNLDMLKTCKLCYSQQLTEVDDLSKAQNIELIDLHGCTKLQRF 635

Query: 465 PSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRG 524
           P+         +N S C  +   P++S  +  L+L  +   E+P S+  L+  + L+L  
Sbjct: 636 PATGQLRHLRVVNLSGCTEIRSVPEVSPNIVELHLQGTGTRELPISLVALSQEDDLNLEK 695

Query: 525 CKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFEN 584
              L ++ +S   L+ LV L +  C++L+  P +                         +
Sbjct: 696 LTTLAQVVSSNQHLQKLVLLNMKDCVHLQSLPHMF------------------------H 731

Query: 585 LPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
           L  LEVL +  CS+L ++     +L+ LY + AA + +  LP S+ +      L++  C 
Sbjct: 732 LETLEVLDLSGCSELKSIQGFPRNLKELYLVGAAVTKLPPLPRSIEV------LNAHGCM 785

Query: 645 GLESFPRTF 653
            L S P  F
Sbjct: 786 SLVSIPFGF 794



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 48/244 (19%)

Query: 638 LDSSHCKGLESFPRTF-LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESL 696
           +D   C  L+ FP T  L  L  + L   ++  +R +P+    +  L   +L G     L
Sbjct: 624 IDLHGCTKLQRFPATGQLRHLRVVNLSGCTE--IRSVPEVSPNIVEL---HLQGTGTREL 678

Query: 697 PAIIKQMSQLRFIHLEDFNML-------QSLPELPLCLKYLHLIDCKMLQSLPVLPF--C 747
           P  +  +SQ   ++LE    L       Q L +L L    L++ DC  LQSLP +     
Sbjct: 679 PISLVALSQEDDLNLEKLTTLAQVVSSNQHLQKLVL----LNMKDCVHLQSLPHMFHLET 734

Query: 748 LESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEI 807
           LE LDL+GC+ L+S+   P  L+ L L    + + LP LP  +++L    C  L S+P  
Sbjct: 735 LEVLDLSGCSELKSIQGFPRNLKELYLVGAAVTK-LPPLPRSIEVLNAHGCMSLVSIP-- 791

Query: 808 LLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRI 867
                       E+L ++                 + F+NC  L  +   + +A+ L  I
Sbjct: 792 ---------FGFERLPRY-----------------YTFSNCFALYAQEVREFVANGLANI 825

Query: 868 RHMA 871
             +A
Sbjct: 826 ERIA 829



 Score = 43.9 bits (102), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 94/227 (41%), Gaps = 46/227 (20%)

Query: 644 KGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQM 703
           +GLES P         + LLH  +Y    +PQE      +E L +S ++ + L    K +
Sbjct: 544 RGLESLPY-------ELRLLHWENYPSESLPQEFDPCHLVE-LNMSYSHLQKLWEGTKNL 595

Query: 704 SQLRFIHLEDFNMLQSLPELPLCLKYLHLID---CKMLQSLPVLPFC--LESLDLTGCNM 758
             L+   L     L  + +L    + + LID   C  LQ  P       L  ++L+GC  
Sbjct: 596 DMLKTCKLCYSQQLTEVDDLSKA-QNIELIDLHGCTKLQRFPATGQLRHLRVVNLSGCTE 654

Query: 759 LRSLPE-----------------LPLCLQYLNLEDCNMLRSLPELPLC---------LQL 792
           +RS+PE                 LP+ L  L+ ED   L  L  L            L L
Sbjct: 655 IRSVPEVSPNIVELHLQGTGTRELPISLVALSQEDDLNLEKLTTLAQVVSSNQHLQKLVL 714

Query: 793 LTVRNCNRLQSLPEI--LLCLQELDASVLEKLSKHSPDLQWAPESLK 837
           L +++C  LQSLP +  L  L+ LD S   +L      +Q  P +LK
Sbjct: 715 LNMKDCVHLQSLPHMFHLETLEVLDLSGCSELKS----IQGFPRNLK 757


>gi|297836991|ref|XP_002886377.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332218|gb|EFH62636.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 934

 Score =  222 bits (566), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 189/637 (29%), Positives = 299/637 (46%), Gaps = 95/637 (14%)

Query: 18  IGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHL--QKQMLSTTLSEKLEVAGP 75
           IGKTT+A+A+  + S  F+ +CF+ ++RG+    GGL+    + Q+    LS+ L   G 
Sbjct: 204 IGKTTIARALHSRLSSSFQLTCFMENLRGSYN--GGLDEYGLKLQLQEQLLSKILNQNGM 261

Query: 76  NIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGE 135
            I H          L  V + + +  QL+ L  E + FG GSRI+VTT D+ +LE+   +
Sbjct: 262 RIYH----------LGAVPERLCDQKQLEALANETNWFGPGSRIIVTTEDQEILEQH--D 309

Query: 136 EKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCL 195
            K  Y V+    EEA + FC +AF+ +  P      +  V       PL L V+GS+L  
Sbjct: 310 IKNTYHVDFPTKEEACKIFCRYAFRRSLAPCGFVQLAERVTELCSNLPLGLRVMGSTLRG 369

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           K++  W  +LH L    + +I+ +   L++ ++ L    + +FL IA FF  +D D V  
Sbjct: 370 KKEGDWEGILHRLENSLDQQINGV---LRVGYDTLHKDDQYLFLLIAFFFNYQDGDHVKI 426

Query: 256 ILDDSESDV---LDILIDKSLVSIS--GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLW 310
           +L DS  DV   L  L  KS++ I+  GN + MH +LQ++GR+ V+ ++   P  R  L 
Sbjct: 427 MLSDSNLDVSLGLKTLTYKSIIQIANDGNIV-MHKLLQQVGREAVQLQN---PKIRKILI 482

Query: 311 DPKEISRVLKHNKGTDAIEGIFLDLSKIK-GINLDPRAFTNMSNLRLFKFYVPKFYEIEK 369
           D  EI  VL++  G+ ++ GI  D+S I+ G+ +  RAF  M NLR    Y  +      
Sbjct: 483 DTDEICDVLENGSGSRSVMGISFDISTIQDGVYISARAFKKMCNLRFLNIYKTRCD---- 538

Query: 370 LPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKV 429
                        +V +P  + + P +LR L WD YP + LP  F P+ LVEL L+ +K+
Sbjct: 539 ----------GNDRVHVPEDMGF-PPRLRLLRWDVYPGKCLPRTFSPEYLVELKLQHNKL 587

Query: 430 EQPWEGEK----------------------------------AC-----VPSSIQNFKYL 450
           E+ WEG +                                  +C     +PSSI N   L
Sbjct: 588 EKLWEGTQRLTNLKKMDLTESRKLKELPDLSNATNLEQLTLVSCKSLVRLPSSIGNLHKL 647

Query: 451 SALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSS 510
             L    C++L+  PS+ +      +    C  L +   IS  +T L++ ++ +EE P S
Sbjct: 648 EWLLVGLCRNLQIVPSHFNLASLERVEMYGCWKLRKLVDISTNITTLFITETMLEEFPES 707

Query: 511 IECLTDLEVLDLRGC--------KRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM 562
           I   + L+ L ++G           +K+I      L  L  L ++GC  L   PE+   +
Sbjct: 708 IRLWSRLQTLRIQGSLEGSHQSGAGIKKIPDCIKYLHGLKELYIVGCPKLVSLPELPSSL 767

Query: 563 EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKL 599
             L+    +      LP  F++L   E L   +C KL
Sbjct: 768 TILQASNCESLETVSLP--FDSL--FEYLHFPECFKL 800



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 22/230 (9%)

Query: 563 EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPD--NIGSLEYLYYILAAAS 620
           E+L  +      + +L    + L  L+ + + +  KL  LPD  N  +LE L   L +  
Sbjct: 575 EYLVELKLQHNKLEKLWEGTQRLTNLKKMDLTESRKLKELPDLSNATNLEQL--TLVSCK 632

Query: 621 AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
           ++ +LPSS+   + L  L    C+ L+  P  F L      L  +  Y   ++ + +   
Sbjct: 633 SLVRLPSSIGNLHKLEWLLVGLCRNLQIVPSHFNLA----SLERVEMYGCWKLRKLVDIS 688

Query: 681 SSLEILYLSGNNFESLPAIIKQMSQLRFIHLE-----DFNMLQSLPELPLCLKYLH---- 731
           +++  L+++    E  P  I+  S+L+ + ++            + ++P C+KYLH    
Sbjct: 689 TNITTLFITETMLEEFPESIRLWSRLQTLRIQGSLEGSHQSGAGIKKIPDCIKYLHGLKE 748

Query: 732 --LIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPL--CLQYLNLEDC 777
             ++ C  L SLP LP  L  L  + C  L ++  LP     +YL+  +C
Sbjct: 749 LYIVGCPKLVSLPELPSSLTILQASNCESLETV-SLPFDSLFEYLHFPEC 797



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 18/206 (8%)

Query: 552 LEHFPEILEKMEHLKRI-YSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
           LE   E  +++ +LK++  ++   + ELP    N   LE L +  C  L  LP +IG+L 
Sbjct: 587 LEKLWEGTQRLTNLKKMDLTESRKLKELPD-LSNATNLEQLTLVSCKSLVRLPSSIGNLH 645

Query: 611 YLYYILAAASAISQL-PSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYA 669
            L ++L       Q+ PS   L+++ R ++   C  L    R  +   + +  L I++  
Sbjct: 646 KLEWLLVGLCRNLQIVPSHFNLASLER-VEMYGCWKL----RKLVDISTNITTLFITETM 700

Query: 670 VREIPQEIAYLSSLEILYL---------SGNNFESLPAIIKQMSQLRFIHLEDFNMLQSL 720
           + E P+ I   S L+ L +         SG   + +P  IK +  L+ +++     L SL
Sbjct: 701 LEEFPESIRLWSRLQTLRIQGSLEGSHQSGAGIKKIPDCIKYLHGLKELYIVGCPKLVSL 760

Query: 721 PELPLCLKYLHLIDCKMLQSLPVLPF 746
           PELP  L  L   +C+ L+++  LPF
Sbjct: 761 PELPSSLTILQASNCESLETVS-LPF 785


>gi|21655189|gb|AAM28909.1| NBS/LRR [Pinus taeda]
          Length = 967

 Score =  222 bits (566), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 234/815 (28%), Positives = 366/815 (44%), Gaps = 95/815 (11%)

Query: 90  LLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEE 149
           +LIVLD+V+   QL  L+      G   R++VTTRDKR+LE    +   IY   GL  ++
Sbjct: 8   ILIVLDNVDNFDQLDALMVT-KVLGPSCRVLVTTRDKRILE--LAQISMIYETTGLNEDQ 64

Query: 150 AFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKR-KSHWGKVLHDL 208
           A E FC  AF         +      V    G PL LE  GS L  K  +  W  +L  +
Sbjct: 65  ATELFCRHAFLSARPKLGFDDLVIKFVEILDGLPLSLETFGSHLYGKADRKVWEAILGKI 124

Query: 209 NRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDV---L 265
           +RI      +I + LKI+   L    KS+FLD AC+  G+ KD    I D S        
Sbjct: 125 SRILP---WNIKERLKITVEALDEEEKSMFLDAACYLAGKGKDTAIRIWDASGWSGWLGF 181

Query: 266 DILIDKSLVSIS-GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKG 324
           + L  + L+ +   N + MHD L+++G+ I+ QES+  PG+RSRLW P +I + L  N G
Sbjct: 182 ETLEQRCLIHVDVKNRIRMHDHLRDIGKDIIDQESKHFPGRRSRLWRPTDIIKALTENSG 241

Query: 325 TDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKV 384
           T+A          ++G++  P++ +N+S++   +  VP  ++ E L  M   + L     
Sbjct: 242 TEA----------VRGLSFVPQS-SNLSSIN--EAGVPTTWQAESLSQMKDLKLLLLQGT 288

Query: 385 QLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKAC----- 439
                  +L K L +L W  +P +++PSN     L  L+L   +V   W+ E  C     
Sbjct: 289 SFGGDFSHLSKNLVWLRWWDFPYQSIPSNLPVGKLEVLDLGRGRVVTLWD-EDDCSQLPL 347

Query: 440 ---------------VPSSIQNFKYLSALSFK--------------------------GC 458
                          VP  I   + L  + F+                           C
Sbjct: 348 KLRELNLTECNQLQRVPKEIGQIRVLQKVVFRRCRLLSSNHSSGRVSDLHFLEHLDLTNC 407

Query: 459 QSLRSFPSNLHFVCPVT-INFSYCVNLIEFPQISGK---VTRLYLGQSAIEEV-PSSIEC 513
           +SLRS P+N   +  +  ++ S+C  L   P    +   +  L   +  I  + P+ +  
Sbjct: 408 RSLRSLPNNFGGLKHLRHLDLSFCSKLKMLPDSFSQLLLINYLTFEKCKILNIGPNILGK 467

Query: 514 LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRT 573
            T LE LD RGC +L+ +  +    R L  L  + C  L+  PE L ++  L+ +  +  
Sbjct: 468 STSLEHLDFRGCDKLQVLPCNITSQRHLKRLN-IHCRGLKQLPEDLGELTGLRYLILECP 526

Query: 574 PITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSN 633
            IT++P S  NL  LE +     S+L ++P+++G LE L  +      +S LP+++   N
Sbjct: 527 QITQIPDSLGNLIHLESIDFRS-SRLRHIPESVGRLELLKLLRIKCHRLSHLPNAIGQLN 585

Query: 634 MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI-PQEIAYLSSLEILYLSGNN 692
            L+SL  + CK L++ P +F   L+ +  L I D    +I P  +  L SLE+L L+G  
Sbjct: 586 NLQSLFLAGCKALQNLPPSF-ENLTKLVTLDIYDAPNLQITPGILDGLRSLEVLSLNGCK 644

Query: 693 FESLPAII------KQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPF 746
             +   II      + + +LR   +E  N L+ L +    LK L +  CK L    +   
Sbjct: 645 SLAEGCIISLCQKAEALERLRLCKMEVENCLRILEQTCSSLKTLEVYACKNLVRAEICST 704

Query: 747 CLESLDLTGCNMLRSLPELP--LCLQYLNLEDCNML---RSLPELPLCLQLLTVRNCNRL 801
            L  + L  C  LR++      + L  L L +C  L    SL +L   L+ L +  C +L
Sbjct: 705 TLTEVSLKNCLQLRTISGFSADMRLTKLCLRNCQELFEVTSLGDLHF-LETLDISGCLKL 763

Query: 802 QSLPEILLC--LQELDASVL-EKLSKHSPDLQWAP 833
            S   + L   L+ LD SV  E L +    LQ  P
Sbjct: 764 FSEGGLHLFKQLEVLDISVTHESLQRQCKWLQRLP 798


>gi|449482311|ref|XP_004156244.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1676

 Score =  222 bits (565), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 223/758 (29%), Positives = 354/758 (46%), Gaps = 132/758 (17%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNS-ETAGGLEHLQKQMLSTT 65
            V  VGI GMGGIGKTT+A+  +++   EFE  CF+S+VR N   T G L  LQ ++LS+ 
Sbjct: 857  VIFVGIHGMGGIGKTTIARVCYERIRDEFEAHCFLSNVRENYIRTLGNLSCLQTKLLSSM 916

Query: 66   LSEK----LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVV 121
             S K    ++V          + + R K L+VLDDV+   Q+K LI + + FG GSR+++
Sbjct: 917  FSLKNNHIMDVEEGTA--MINKAIFRKKTLLVLDDVDSSDQIKGLIPDNNSFGNGSRVII 974

Query: 122  TTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCP-EDLNWHSRSVVSYTK 180
            TTR+   L    G  K+I+ ++ L++EEA +     AF +  CP E    HS+ +V    
Sbjct: 975  TTRNADFLSNEFG-VKRIFEMDELKYEEALQLLSLSAFMKT-CPKEGYLEHSKKIVKVVG 1032

Query: 181  GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHD-IYDILKISFNKLTPRVKSIFL 239
            G+PL L++LGSSL  K  S W +V+ ++       IH+ I+  LK+S++ L  R + IFL
Sbjct: 1033 GHPLALKLLGSSLRNKNLSVWNEVIEEVG--GGGNIHEKIFKCLKVSYDGLDEREREIFL 1090

Query: 240  DIACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSIS-GNFLNMHDILQEMGRQIV 295
            D+ACFF G+ ++ V  IL+         +++LI KSL+++S  N L+MH++LQEMGR+IV
Sbjct: 1091 DVACFFNGKRREVVEEILNGCGFYAKTRIELLIQKSLLTLSYDNKLHMHNLLQEMGRKIV 1150

Query: 296  RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
            R +       R RL   K+I  V               +L ++K I L+       S+ +
Sbjct: 1151 RDKH-----VRDRLMCHKDIKSV---------------NLVELKYIKLN-------SSQK 1183

Query: 356  LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
            L K   P F  I  L  +  E+  S   +                          PS F 
Sbjct: 1184 LSK--TPNFANIPNLKRLELEDCTSLVNIH-------------------------PSIFT 1216

Query: 416  PKNLVELNLR-CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPV 474
             + L+ L+L+ C  +          +PS I N K L  L   GC  ++  P         
Sbjct: 1217 AEKLIFLSLKDCINLTN--------LPSHI-NIKVLEVLILSGCSKVKKVP--------- 1258

Query: 475  TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTS 534
                       EF   + ++ +L+L  ++I  +PSSI  L+ L +L L  CK L  IS +
Sbjct: 1259 -----------EFSGNTNRLLQLHLDGTSISNLPSSIASLSHLTILSLANCKMLIDISNA 1307

Query: 535  FCKLRSLVTLILLGCLNLE---------HFPEILEKMEHLKRIYSD-------------R 572
              ++ SL +L + GC  L             E+  +    +R   D              
Sbjct: 1308 I-EMTSLQSLDVSGCSKLGSRKGKGDNVELGEVNVRETTRRRRNDDCNNIFKEIFLWLCN 1366

Query: 573  TPITELPS--SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVA 630
            TP T +    S   L  L  L ++DC+ L+ +P  I  +  L  +  + +  S LP+S++
Sbjct: 1367 TPATGIFGIPSLAGLYSLTKLNLKDCN-LEVIPQGIECMVSLVELDLSGNNFSHLPTSIS 1425

Query: 631  LSNMLRSLDSSHCKGLESFPR--TFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEIL-- 686
              + L+ L  + CK L  FP+    +L L++   + + D+        +  +  + +L  
Sbjct: 1426 RLHNLKRLRINQCKKLVHFPKLPPRILFLTSKDCISLKDFIDISKVDNLYIMKEVNLLNC 1485

Query: 687  YLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
            Y   NN +    II  M ++ F     FN++    E+P
Sbjct: 1486 YQMANNKDFHRLIISSMQKM-FFRKGTFNIMIPGSEIP 1522



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 190/448 (42%), Gaps = 85/448 (18%)

Query: 514  LTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHF-PEILEKMEHLKRIYSDR 572
            L +L+ + L   ++L + + +F  + +L  L L  C +L +  P I    + +     D 
Sbjct: 1170 LVELKYIKLNSSQKLSK-TPNFANIPNLKRLELEDCTSLVNIHPSIFTAEKLIFLSLKDC 1228

Query: 573  TPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALS 632
              +T LPS   N+  LEVL +  CSK+  +P+  G+   L  +    ++IS LPSS+A  
Sbjct: 1229 INLTNLPSHI-NIKVLEVLILSGCSKVKKVPEFSGNTNRLLQLHLDGTSISNLPSSIASL 1287

Query: 633  NMLRSLDSSHCKGL----ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYL 688
            + L  L  ++CK L     +   T L  L   G   +     +    E+  ++  E    
Sbjct: 1288 SHLTILSLANCKMLIDISNAIEMTSLQSLDVSGCSKLGSRKGKGDNVELGEVNVRETTRR 1347

Query: 689  SGNNFESLPAIIKQMSQLRFIHL--EDFNMLQSLPELP--LCLKYLHLIDCKMLQSLPVL 744
              N  +    I K++    F+ L       +  +P L     L  L+L DC  L+ +P  
Sbjct: 1348 RRN--DDCNNIFKEI----FLWLCNTPATGIFGIPSLAGLYSLTKLNLKDCN-LEVIPQG 1400

Query: 745  PFCLESL---DLTGCNMLRSLPELPLC------LQYLNLEDCNMLRSLPELPLCLQLLTV 795
              C+ SL   DL+G N       LP        L+ L +  C  L   P+LP  +  LT 
Sbjct: 1401 IECMVSLVELDLSGNN----FSHLPTSISRLHNLKRLRINQCKKLVHFPKLPPRILFLTS 1456

Query: 796  RNCNRLQSLPEI-----LLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLK 850
            ++C  L+   +I     L  ++E++                               NC +
Sbjct: 1457 KDCISLKDFIDISKVDNLYIMKEVN-----------------------------LLNCYQ 1487

Query: 851  LNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSL-IVLPGSEIPDWFSNQ 909
            +   ANNK           + I+S+         +K+   +G+  I++PGSEIPDWF+ +
Sbjct: 1488 M---ANNK-------DFHRLIISSM---------QKMFFRKGTFNIMIPGSEIPDWFTTR 1528

Query: 910  SSGSSICIQLPPHSSCRNLIGFAFCAVL 937
              GSS+C++  P +   N+I FA C V+
Sbjct: 1529 KMGSSVCMEWDPDAPNTNMIRFALCVVI 1556



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 134/308 (43%), Gaps = 44/308 (14%)

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            +++  +  SI     L  L L+ C  L  +  S   ++ L  LIL GC  ++  PE    
Sbjct: 1205 TSLVNIHPSIFTAEKLIFLSLKDCINLTNLP-SHINIKVLEVLILSGCSKVKKVPEFSGN 1263

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNI--GSLEYLYYILAAA 619
               L +++ D T I+ LPSS  +L  L +L + +C  L ++ + I   SL+ L       
Sbjct: 1264 TNRLLQLHLDGTSISNLPSSIASLSHLTILSLANCKMLIDISNAIEMTSLQSL-----DV 1318

Query: 620  SAISQLPS-----------SVALSNMLRSLDSSHCKGL--ESF------PRTFLLGLSAM 660
            S  S+L S            V +    R   +  C  +  E F      P T + G+ ++
Sbjct: 1319 SGCSKLGSRKGKGDNVELGEVNVRETTRRRRNDDCNNIFKEIFLWLCNTPATGIFGIPSL 1378

Query: 661  -GL-----LHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDF 714
             GL     L++ D  +  IPQ I  + SL  L LSGNNF  LP  I ++  L+ + +   
Sbjct: 1379 AGLYSLTKLNLKDCNLEVIPQGIECMVSLVELDLSGNNFSHLPTSISRLHNLKRLRINQC 1438

Query: 715  NMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPL--CLQYL 772
              L   P+LP  + +L   DC  L+           +D++  + L  + E+ L  C Q  
Sbjct: 1439 KKLVHFPKLPPRILFLTSKDCISLKDF---------IDISKVDNLYIMKEVNLLNCYQMA 1489

Query: 773  NLEDCNML 780
            N +D + L
Sbjct: 1490 NNKDFHRL 1497


>gi|297790638|ref|XP_002863204.1| hypothetical protein ARALYDRAFT_333042 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309038|gb|EFH39463.1| hypothetical protein ARALYDRAFT_333042 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 916

 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 241/793 (30%), Positives = 369/793 (46%), Gaps = 152/793 (19%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            SD  Q +GI GMGGIGKTTLAKA+++QFS  FEG+ F+ + +  S+   G  HLQ+++L
Sbjct: 183 GSDDAQTIGICGMGGIGKTTLAKAVYNQFSDRFEGTSFLENFKEYSKKPEGKIHLQRKLL 242

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
           S            +I     +  R  ++L+V+DDV +V QL  +  +L  FG GSRI++T
Sbjct: 243 S------------DITKNNDQVFRNRRVLVVIDDVEDVDQLASVGIDLSCFGPGSRIIIT 290

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
           +RD  +LE  + E   IY  N L  E++ +     AF+                      
Sbjct: 291 SRDMHLLELLKVEN--IYLPNALNSEKSLKLIRLHAFRTRL------------------- 329

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL +EVL S L  +  S W   L  L  +    I      L+ISF+ L    K IFLDI+
Sbjct: 330 PLAMEVLDSFLFKRSISEWKSTLKSLKSLPNDNIQ---AKLEISFDALNAFQKDIFLDIS 386

Query: 243 CFFEGEDKDFVASILD--DSESDV-LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQES 299
           CFF G DKD+V  ILD  D   D+ L +L ++ L++   N L MHD+L++MGR IVR+  
Sbjct: 387 CFFIGVDKDYVRCILDGCDLYPDIGLSVLKERCLITFHDNRLMMHDLLRDMGRHIVRERL 446

Query: 300 EKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL-SKIKGI-NLDPRAFTNMSNLRLF 357
           +K                      G D   GI L L +++  + NL+ +AF+N++ LRL 
Sbjct: 447 QKNV------------------KDGVDY--GIMLILKAEVTSVENLEVKAFSNLTMLRL- 485

Query: 358 KFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
                                L  S V L       P +LR+L W  +PL ++P++F+  
Sbjct: 486 ---------------------LQLSHVHLNGSYANFPNRLRWLCWLGFPLHSIPTDFRLG 524

Query: 418 NLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTIN 477
           +LV L+++ S +++ W   K   P S++  KYL                          +
Sbjct: 525 SLVILDMQYSNLKRLWGDGKQ--PQSLKELKYL--------------------------D 556

Query: 478 FSYCVNLIEFPQISG--KVTRLYLGQ-SAIEEVPSSIECLTD-LEVLDLRGCKRLKRIST 533
            S+ + L + P  S    + +L L    ++  V  SI  L + L +L+L+ C +L  +  
Sbjct: 557 LSHSIQLTDTPDFSNLPNLEKLLLINCKSLVRVHKSIGTLHEKLILLNLKDCTKLGDLPL 616

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFV 593
               L+SL TLI+ GC+ LE     L  M+ L  + ++ T IT++P        LE L +
Sbjct: 617 ELYMLKSLETLIVSGCVKLERLDNALRDMKSLTTLKANYTAITQIPYMSNQ---LEELSL 673

Query: 594 EDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF 653
           + C +L  + DN  S E                S  A  ++L  L+   C          
Sbjct: 674 DGCKELWKVRDNTHSDE----------------SPQATLSLLFPLNVISC---------- 707

Query: 654 LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLED 713
            L    +G  ++SD  V   P+ +  LS LE L L GNNF +L      +S L+ + ++ 
Sbjct: 708 -LKTLRLGSCNLSDELV---PKNLGSLSCLEELDLQGNNFRNLQMDFAGLSSLQILKVDS 763

Query: 714 FNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSLPELP--LCL 769
            + LQS+  LP  L+  +  +C ML+  P L  C  L+SL LT C  L   P L     +
Sbjct: 764 CSELQSMFSLPKRLRSFYASNCIMLERTPDLSECSVLQSLHLTNCFNLVETPGLDKLKTV 823

Query: 770 QYLNLEDCNMLRS 782
             +++E CN + +
Sbjct: 824 GVIHMEMCNRIST 836



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 185/424 (43%), Gaps = 80/424 (18%)

Query: 556 PEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSL--EYLY 613
           P+ L+++++L   +S    +T+ P  F NLP LE L + +C  L  +  +IG+L  + + 
Sbjct: 546 PQSLKELKYLDLSHS--IQLTDTPD-FSNLPNLEKLLLINCKSLVRVHKSIGTLHEKLIL 602

Query: 614 YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREI 673
             L   + +  LP  + +   L +L  S C  LE      L  + ++  L  +  A+ +I
Sbjct: 603 LNLKDCTKLGDLPLELYMLKSLETLIVSGCVKLERLDNA-LRDMKSLTTLKANYTAITQI 661

Query: 674 PQEIAYLSS-LEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPEL-PL----CL 727
           P    Y+S+ LE L L G          K++ ++R     D +   +L  L PL    CL
Sbjct: 662 P----YMSNQLEELSLDG---------CKELWKVRDNTHSDESPQATLSLLFPLNVISCL 708

Query: 728 KYLHLIDCKMLQSLPVLPF----CLESLDLTGCNMLRSLPELPLC----LQYLNLEDCNM 779
           K L L  C +   L         CLE LDL G N  R+L ++       LQ L ++ C+ 
Sbjct: 709 KTLRLGSCNLSDELVPKNLGSLSCLEELDLQG-NNFRNL-QMDFAGLSSLQILKVDSCSE 766

Query: 780 LRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSA 839
           L+S+  LP  L+     NC  L+  P++  C      SVL+ L                 
Sbjct: 767 LQSMFSLPKRLRSFYASNCIMLERTPDLSEC------SVLQSL----------------- 803

Query: 840 AICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRG------S 893
                 TNC  L       +    L +++ + +  + +   ++ + + S ++G       
Sbjct: 804 ----HLTNCFNL-------VETPGLDKLKTVGVIHMEMCNRISTDYRESIMQGWAVGANG 852

Query: 894 LIVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDC-FRYFYV 952
            I +PGS +P+W S ++   SI   + P S   +L+GF    +L +  +   C F  F+V
Sbjct: 853 GIFIPGSSVPNWVSFKNERHSISFTV-PESLNADLVGFTLWLLLKNPCL---CVFLQFWV 908

Query: 953 SFQF 956
            F+F
Sbjct: 909 DFKF 912


>gi|13509236|emb|CAC35338.1| Nbi-D protein [Linum usitatissimum]
          Length = 1108

 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 242/865 (27%), Positives = 398/865 (46%), Gaps = 129/865 (14%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +DSS + +I+GI GMGG+GKTTLAKA++D+ S +FE   F+ ++R       G+  LQ +
Sbjct: 227  LDSSTSEKIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENIRDTLLEKNGVSILQNK 286

Query: 61   MLSTTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            ++S  L +    A    +     ++RV R KLLIVLDDV+E  Q   ++G+ + F   SR
Sbjct: 287  IISGILRKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQFDDVLGKFENFSTDSR 346

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
             ++TTRD R LE  R  E K++ +  +  + +   F   AF  +   ED    S+     
Sbjct: 347  FLITTRDVRGLELLR--ECKMFELQEMSPDHSLTLFNKHAFGVDSPQEDYAILSKDFSQA 404

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL ++V+GS L    K  W + L +L +I  +++    + LKIS+N+LT   + IF
Sbjct: 405  AAGLPLYIKVIGSLLYRMDKIFWEEKLEELKKISPTKVQ---ERLKISYNELTHTERQIF 461

Query: 239  LDIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLN--------MHDI 286
            LDIAC+F    K     + +D    SES +   L  +SL+ +   ++         MHD 
Sbjct: 462  LDIACYFIESFKIGPMLMWNDCDFYSESTIRS-LTQRSLIKLQKPYIKGADIDMFWMHDH 520

Query: 287  LQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR 346
            ++++GR IVR+E  + P KRSR+W  K+   +LKH KGTD +E + +D+ K +   L  +
Sbjct: 521  VRDLGRAIVREEKNQNPYKRSRIWSNKDAVDMLKHKKGTDWVEILEVDM-KFEDFMLTDK 579

Query: 347  AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
             F  ++ LR  K              +S        K  LPN        LR+L   +  
Sbjct: 580  EFEKLTRLRYLK--------------VSNGRLAGDFKDVLPN--------LRWLRLKSCD 617

Query: 407  LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS 466
              ++P+    K LV L L    V   W+G      + ++  + L A+S K C  L+  P 
Sbjct: 618  --SIPTGLYLKKLVTLQLVDCSVRDGWKGW-----NELKVARKLKAVSLKRCFHLKKVPD 670

Query: 467  NLHFVCPVTINFSYCVNL-------------------IEFPQISGKVTRL----YL--GQ 501
                     ++F  C N+                    +  +I G++ RL    YL    
Sbjct: 671  FSDCEDLECLDFEECRNMRGEVDIGNFKSLRYLLISNTKITKIKGEIGRLLNLKYLLASD 730

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S+++EVP+ I  L+ L+ L L      K   T    L + +TL+ +     +  P+    
Sbjct: 731  SSLKEVPAGISKLSSLKNLSLALIDPYKSDFTEM--LPASLTLLYISNDTQKFCPDT--S 786

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASA 621
             E+L+R+ +    I  L     ++   E+L              +G L+ L Y+      
Sbjct: 787  SENLQRLPNLSNLINLLILHLRDVGIGEIL-------------GLGELKMLEYL-----D 828

Query: 622  ISQLPSSVALSN-----MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD----YAVRE 672
            I + P  V L       +L+ L    C  ++  P   L+ L+ + LL I D      +  
Sbjct: 829  IGRAPRIVHLDGLENLVLLQHLRVEGCPIIKKLPS--LVALTRLELLWIQDCPLVTEING 886

Query: 673  IPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHL-------EDFNMLQSLPELP 724
            + Q    LS L+++  S     ESL +++K + +L  +            +M   L EL 
Sbjct: 887  MGQLWESLSHLKVVGCSALIGLESLHSMVK-LERLLLVGCVLTETMPPSLSMFTKLTELS 945

Query: 725  LC-LKYLHLIDCKMLQSLPVL--PFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLR 781
            LC + +    D   L++L VL   FC E +++ G + L S       L++L++E C  +R
Sbjct: 946  LCAMPWKQFPDLSNLKNLRVLCMSFCQELIEVPGLDALES-------LKWLSMEGCRSIR 998

Query: 782  SLPELPLC--LQLLTVRNCNRLQSL 804
             +P+L     L+ L V +C +L+ +
Sbjct: 999  KVPDLSGLKKLKTLDVESCIQLKEV 1023


>gi|357469227|ref|XP_003604898.1| Nbs-lrr resistance protein [Medicago truncatula]
 gi|355505953|gb|AES87095.1| Nbs-lrr resistance protein [Medicago truncatula]
          Length = 1191

 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 154/446 (34%), Positives = 232/446 (52%), Gaps = 63/446 (14%)

Query: 7    VQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML---- 62
            V ++GIWGMGG GKTT+AKAI++Q   +FEG  F+  VR   ET   L  LQ+Q+L    
Sbjct: 791  VLLLGIWGMGGTGKTTIAKAIYNQIGSKFEGMSFLLGVREFWETHTNLVSLQQQVLCDVY 850

Query: 63   STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
             TT S+  ++    I    K+R               + Q  R     + FG GSRI++T
Sbjct: 851  KTTTSKIHDIESGKI--ILKQR---------------LAQKSR-----EWFGSGSRIIIT 888

Query: 123  TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGN 182
            TRD R+L        ++Y +  ++  E+ E F   AFK    P D   HS  V++Y+   
Sbjct: 889  TRDMRLLRSC----DQLYAIKEMDESESLELFSWHAFKLPSPPIDFATHSTDVIAYSGRL 944

Query: 183  PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRV-KSIFLDI 241
            PL LEVLGS L     + W KVL  L  I   ++      L++SF+ L     + IFLDI
Sbjct: 945  PLALEVLGSYLSDCEITEWQKVLEKLKCIPHDQVQ---KKLRVSFDGLKDVTEQQIFLDI 1001

Query: 242  ACFFEGEDKDFVASILDDS---ESDVLDILIDKSLVSI-SGNFLNMHDILQEMGRQIVRQ 297
            ACFF G D++ V  IL+         + IL+++SLV++ +GN L +HD+L++MGRQI+ +
Sbjct: 1002 ACFFIGMDQNDVIQILNGCGFFADSGMKILLERSLVTVDNGNKLRVHDLLRDMGRQIIYE 1061

Query: 298  ESEKEPGKRSRLWDPKEISRVLKHN---KGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
            ES  +P  RSRLW   E+  +L ++   KG +A++G+ L   K   + L+  AF  M  L
Sbjct: 1062 ESPLDPENRSRLWRSDEVIDMLYNDSNLKGAEAVKGLALKFPKENLVRLNSNAFQKMYKL 1121

Query: 355  RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNF 414
            RL                      L  + V+L     +L + LR+L+W  +PL  +P+ F
Sbjct: 1122 RL----------------------LQLAGVKLKGDFKHLSRNLRWLYWHGFPLTYIPAEF 1159

Query: 415  KPKNLVELNLRCSKVEQPWEGEKACV 440
            + ++LV + L+ S + Q W+  K  +
Sbjct: 1160 QQESLVAIELKYSNLTQTWKKNKVQI 1185



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/306 (36%), Positives = 171/306 (55%), Gaps = 30/306 (9%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE 68
           I+GIWGM GIGK+++  AI +Q    FE   F+ +  G          L K  L   L E
Sbjct: 294 ILGIWGMPGIGKSSIVHAICNQIGPYFEHMSFLENAEG----------LWKDKLQVYLEE 343

Query: 69  KL-----EVAGPNIPH------FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGS 117
           +L     E    NI         +KE++R  ++L++LD+V+++ QLK L G  + FG+GS
Sbjct: 344 ELIFHIDEQFERNISTTEARRMISKEKLRHKRVLLILDNVDKLDQLKALCGNREWFGRGS 403

Query: 118 RIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVS 177
           +I++TTRD+ +L+K   +   IY V  L+  E+ E F   AF++    +D    SR VV+
Sbjct: 404 KIIITTRDRHLLKKHGVD--YIYGVKQLDESESLELFNLGAFRQATSGKDFVELSRQVVA 461

Query: 178 YTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSI 237
           Y+ G PL L+VLGS+L  KR   W   LH L       + ++  +L+ SFN L+   + +
Sbjct: 462 YSGGLPLALKVLGSNLYSKRVDFWESELHLLKMF---PLQEVQRVLEDSFNDLSDVERRV 518

Query: 238 FLDIACFFEGEDKDFVASILDDSE--SDV-LDILIDKSLVSIS-GNFLNMHDILQEMGRQ 293
           FLDIA FF G +++ V   L+ S   +D+ + +L DKS V+I   N L MH +LQ M R 
Sbjct: 519 FLDIALFFIGMNQNDVLETLNRSTQCTDLQISLLQDKSFVTIDENNNLQMHVLLQSMARD 578

Query: 294 IVRQES 299
           ++R++S
Sbjct: 579 VIRRKS 584


>gi|224126833|ref|XP_002329484.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870164|gb|EEF07295.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 507

 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 197/331 (59%), Gaps = 20/331 (6%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           ++  V+IVGI GM GIGKTT+AK +F+Q  + FEGSCF S++   S+   GL  LQ+Q+L
Sbjct: 160 ATHDVRIVGIHGMPGIGKTTIAKVVFNQLRYRFEGSCFFSNINETSKQFNGLALLQEQLL 219

Query: 63  STTLSEKLEVAGPNIPH----FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
              L  K +VA  N         KER+RR ++L+V DDV    QL  L+GE   FG GSR
Sbjct: 220 HDIL--KQDVANINCVDRGKVLIKERLRRKRVLVVADDVTRQDQLNALMGERGWFGPGSR 277

Query: 119 IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
           +++TTRD   L K      + Y++  L+ +E+F+ F   A ++    ED    S+ VV Y
Sbjct: 278 VIITTRDSSFLHK----ADQTYQIEELKPDESFQLFSWHALRDTKPAEDYIELSKDVVDY 333

Query: 179 TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLT-PRVKSI 237
             G PL LEV+G+ L  K +  W  V+  L RI      DI   L+ISF+ L    +++ 
Sbjct: 334 CGGIPLALEVMGACLSGKNRDGWKSVIDKLRRIPN---RDIQGKLRISFDALDGEELQNA 390

Query: 238 FLDIACFFEGEDKDFVASILD-----DSESDVLDILIDKSLVSISGNFLNMHDILQEMGR 292
           FLDIACFF    K++VA +L      + E D L  L ++SL+ + G  + MHD+L++MGR
Sbjct: 391 FLDIACFFIDRKKEYVAKVLGARCGYNPEVD-LQTLHERSLIKVLGETVTMHDLLRDMGR 449

Query: 293 QIVRQESEKEPGKRSRLWDPKEISRVLKHNK 323
           ++VR++S K+PG+R+R+W+ ++   VL+  K
Sbjct: 450 EVVREKSPKQPGERTRIWNQEDAWNVLEQQK 480


>gi|32329191|gb|AAP74724.1| disease resistance-like protein KR7 [Glycine max]
          Length = 402

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/425 (35%), Positives = 228/425 (53%), Gaps = 41/425 (9%)

Query: 9   IVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSE 68
           ++GI GMGG+GK+TLA+A+++  +  F+ SCF+ +VR  S    GL+ LQ  +LS  L +
Sbjct: 1   MIGIHGMGGVGKSTLARAVYNLHTDHFDDSCFLQNVREES-NRHGLKRLQSILLSQILKK 59

Query: 69  KLEVAGPNI-PHFTKERVRRMKLLIVLDDVNEVGQLKRLIGEL----DQFGQGSRIVVTT 123
           ++ +A         K +++  K+L+VLDDV+E  QL+ ++G+      +FG    +++TT
Sbjct: 60  EINLASEQQGTSMIKNKLKGKKVLLVLDDVDEHKQLQAIVGKSVWSESEFGTRLVLIITT 119

Query: 124 RDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKE-NHCPEDLNWHSRSVVSYTKGN 182
           RDK++L  +    K+ + V  L  ++A +     AFK  +   +  N     VV++T G 
Sbjct: 120 RDKQLLTSYG--VKRTHEVKELSKKDAIQLLKRKAFKTYDEVDQSYNQVLNDVVTWTSGL 177

Query: 183 PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIA 242
           PL LEV+GS+L  K    W   +    RI   EI     ILK+SF+ L    KS+FLDI 
Sbjct: 178 PLALEVIGSNLFGKSIKEWESAIKQYQRIPNKEI---LKILKVSFDALEEEEKSVFLDIT 234

Query: 243 CFFEG----EDKDFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQE 298
           C  +G    E +D + S+ D+     + +L+DKSL+ IS + + +HD+++ MG++I RQ+
Sbjct: 235 CCLKGYKCREIEDILHSLYDNCMKYHIGVLVDKSLIQISDDRVTLHDLIENMGKEIDRQK 294

Query: 299 SEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDL---SKIKGINLDPRAFTNMSNLR 355
           S KE GKR RLW  K+I +VLK N GT  ++ I LD     K + I  +  AF  M NL+
Sbjct: 295 SPKETGKRRRLWLLKDIIQVLKDNSGTSEVKIICLDFPISDKQETIEWNGNAFKEMKNLK 354

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
                                  L      L  G +YLP+ LR L W  +P   LPS+F 
Sbjct: 355 ----------------------ALIIRNGILSQGPNYLPESLRILEWHRHPSHCLPSDFD 392

Query: 416 PKNLV 420
             NL 
Sbjct: 393 TTNLA 397


>gi|227438149|gb|ACP30564.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1084

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 227/796 (28%), Positives = 348/796 (43%), Gaps = 178/796 (22%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLST 64
           D VQI+GIWGM GIG++                  F+ + R   +   G  HLQK++LS 
Sbjct: 208 DDVQIIGIWGMAGIGRS------------------FLENFRDYFKRPDGKLHLQKKLLSD 249

Query: 65  TLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTR 124
            L  K E A  N+ H  K                                          
Sbjct: 250 IL-RKDEAAFNNMDHAVK------------------------------------------ 266

Query: 125 DKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPL 184
                ++FR +   +     L  +EA +     AF+ +  PE+     + +V Y  G PL
Sbjct: 267 -----QRFRNKRSSL-TPKELNADEALDLVSWHAFRSSEPPEEFLQFPKRLVEYCGGLPL 320

Query: 185 VLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACF 244
            +EVLG+ L  +  S W   L  L RI +    +I   L+ISF+ L    K IFLDI+CF
Sbjct: 321 AMEVLGAFLYKRSVSEWKSTLKALKRIPDD---NIQAKLQISFDALNALQKDIFLDISCF 377

Query: 245 FEGEDKDFVASILDDSESD---VLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEK 301
           F G DKD+V  ILD  E +    L +L ++ L++I  N L MHD+L++MGR IV+  S+K
Sbjct: 378 FIGMDKDYVDCILDGCELEPVAGLKVLKERCLITIHDNRLMMHDLLRDMGRYIVQGTSKK 437

Query: 302 EPGKR---SRLWDPKEISRVLKHNKGTDA------IEGIFLDLSKIKGINLDPRAFTNMS 352
               R   SRLWD   +  VL++  GTDA      IEG+ L        NL+ +AF+N+ 
Sbjct: 438 HVKNRVKWSRLWDRVHVIDVLENYSGTDANHPNHAIEGLSLKAEVTAVENLEVKAFSNLR 497

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPS 412
                                     L  S V L    +  PK LR+L W  +P  ++P 
Sbjct: 498 ----------------------RLRLLQLSHVVLNGSYENFPKGLRWLCWLGFPEESIPI 535

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVC 472
           N   ++LV ++++ S +++ W+ +      S++  KYL                      
Sbjct: 536 NLHLRSLVVMDMQNSNLKRLWDQKPH---DSLKELKYL---------------------- 570

Query: 473 PVTINFSYCVNLIEFPQIS--GKVTRLYLGQ-SAIEEVPSSIECLT-DLEVLDLRGCKRL 528
               + S+ + L E P  S    + +L+L     + +V  SI+ L   L +L+L GC +L
Sbjct: 571 ----DLSHSIQLTETPDFSYLPNLEKLFLINCQRLAKVHESIKVLQGSLILLNLSGCIKL 626

Query: 529 KRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGL 588
             +      L+ L TLIL GC  LE   + L ++E L  + +D T IT++PSS + L  L
Sbjct: 627 GELPLELYTLKLLETLILSGCSQLERLDDALGELESLTILKADYTAITQIPSSSDQLKEL 686

Query: 589 EVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNM--LRSLDSSHCKGL 646
               +  C +L          +   Y  +  S+   L S ++L+ +  LR+L   +C   
Sbjct: 687 S---LHGCKEL---------WKDRQYTNSDESSQVALLSPLSLNGLICLRTLRLGYC--- 731

Query: 647 ESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQL 706
                            ++SD  V   P  +  LSSLE L L GNNF +L      +  L
Sbjct: 732 -----------------NLSDELV---PVNLGSLSSLEELDLQGNNFRNLQTDFAGLPSL 771

Query: 707 RFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSLPE 764
           + + L++ + L+S+  LP  L+ L+  +C +L+  P L  C  L+SL LT C  L   P 
Sbjct: 772 QILKLDNCSELRSMFSLPKKLRSLYARNCTVLERTPDLKECSVLQSLHLTNCYNLVETPG 831

Query: 765 LP--LCLQYLNLEDCN 778
           L     +  +++E CN
Sbjct: 832 LEELKTVGVIHMEMCN 847



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 161/384 (41%), Gaps = 59/384 (15%)

Query: 575 ITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAI--SQLPSSVALS 632
           +TE P  F  LP LE LF+ +C +L  + ++I  L+    +L  +  I   +LP  +   
Sbjct: 578 LTETPD-FSYLPNLEKLFLINCQRLAKVHESIKVLQGSLILLNLSGCIKLGELPLELYTL 636

Query: 633 NMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNN 692
            +L +L  S C  LE      L  L ++ +L     A+ +IP     L  L         
Sbjct: 637 KLLETLILSGCSQLERLDDA-LGELESLTILKADYTAITQIPSSSDQLKEL--------- 686

Query: 693 FESLPAIIKQMSQLRFIHLEDFNMLQSLPELPL----CLKYLHLIDCKMLQSLPVLPF-- 746
             SL    +     ++ + ++ + +  L  L L    CL+ L L  C +   L  +    
Sbjct: 687 --SLHGCKELWKDRQYTNSDESSQVALLSPLSLNGLICLRTLRLGYCNLSDELVPVNLGS 744

Query: 747 --CLESLDLTGCN---MLRSLPELPLCLQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRL 801
              LE LDL G N   +      LP  LQ L L++C+ LRS+  LP  L+ L  RNC  L
Sbjct: 745 LSSLEELDLQGNNFRNLQTDFAGLP-SLQILKLDNCSELRSMFSLPKKLRSLYARNCTVL 803

Query: 802 QSLPEILLC--LQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKI 859
           +  P++  C  LQ L  +    L + +P L    E LK+  +      C       NN  
Sbjct: 804 ERTPDLKECSVLQSLHLTNCYNLVE-TPGL----EELKTVGV-IHMEMC-------NNVP 850

Query: 860 LADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
            +D   R R M       G+ +  N       G + V PGS IPDW + ++   SI   +
Sbjct: 851 YSD---RERIMQ------GWAVGAN-------GGVFV-PGSTIPDWVNFKNGTRSISFTV 893

Query: 920 PPHSSCRNLIGFAFCAVLDSKKVD 943
           P  +    L+GF       S++ D
Sbjct: 894 PEPTLNSVLVGFTVWTTYVSQQDD 917


>gi|357499697|ref|XP_003620137.1| Resistance protein [Medicago truncatula]
 gi|355495152|gb|AES76355.1| Resistance protein [Medicago truncatula]
          Length = 1257

 Score =  220 bits (560), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 286/987 (28%), Positives = 433/987 (43%), Gaps = 161/987 (16%)

Query: 3    SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
            S D + +VGI G+GGIGKTTLA  +++    +F+GSCF+  VR NS+   GL +LQK +L
Sbjct: 196  SDDAIHMVGIHGIGGIGKTTLALEVYNSIVCQFQGSCFLEKVRENSD-KNGLIYLQKILL 254

Query: 63   STTLSEK---LEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
            S    EK   L   G  I    ++R+ + K+L++LDDV+ + QL+ + G    FG GSR+
Sbjct: 255  SQIFGEKNIELTSVGQGIS-MLRQRLHQKKILLLLDDVDNLEQLEAIAGRSVWFGPGSRV 313

Query: 120  VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPE------------- 166
            ++TTRDKR+L   R E +  Y VNGL  E+AF+     A K  + P              
Sbjct: 314  IITTRDKRLLT--RHEIEITYEVNGLNDEDAFDLIRWKALKNKYSPSYKDILFVTKYGRE 371

Query: 167  --DLNWHS--------RSVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEI 216
              D+N           +  V+Y  G PL LEV+GS    K        L    R+ + +I
Sbjct: 372  LMDMNDKVFSGYVHVLKRAVAYASGLPLALEVIGSHFFNKTIEECKCALDRYERVPDKKI 431

Query: 217  HDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILDDSESDVL----DILIDKS 272
                  L++SFN L    KS+FLDIAC F+G     V  IL     D++    + L++KS
Sbjct: 432  QTT---LQLSFNALQEEEKSVFLDIACCFKGWKLKRVEEILHAHHGDIMKDHINALVEKS 488

Query: 273  LVSIS--GNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNK------- 323
            L+ +S  GN L +HD++++MG++IVRQES + PGKRSRLW  K+I RVL+ N        
Sbjct: 489  LIKVSESGN-LTLHDLVEDMGKEIVRQESPENPGKRSRLWSSKDIIRVLEENTVSNNDMD 547

Query: 324  --GTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEI--EKLPSMSTEEQL 379
              GT  IE I+ D  +   +  D  AF  M NL+   F    F+    + LP+     + 
Sbjct: 548  DLGTSKIEIIYFD--RWIRVEWDGEAFKKMENLKTLIFSNDVFFSKNPKHLPNSLRVLEC 605

Query: 380  SYSKVQLPNGLDYLPKKLRYLHWDTYPLR-----TLPSNFKPKNLVELNLRCSKVEQP-- 432
             Y K    +   +  +   ++H  + P       T  S F+   ++ L+      E P  
Sbjct: 606  RYHKYHSSDFHVHDDRCHFFIHPPSNPFEWKGFFTKASKFENMRVLNLDHSEGLAEIPNI 665

Query: 433  -----------WEGEKA-CVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSY 480
                         GEK   +  SI     L       C  +RS P  L       I FS+
Sbjct: 666  SGLPNLEEFSIQNGEKVIAIDKSIGFLGKLKIFRIISCAEIRSVPP-LSLASLEEIEFSH 724

Query: 481  CVNLIEFP----QISGKVTRL-YLGQSAIEEVPSSIECLTDLEVLDLRGCK--------- 526
            C +L  FP    +  GK+  L  +  + I+ +PS I  L  LE LDL  C          
Sbjct: 725  CYSLESFPLMVNRFLGKLKILRVINCTKIKIIPSLI--LPSLEELDLSDCTGLESFPPLV 782

Query: 527  -----RLKRISTSFC-KLRSLVTLILLG--------CLNLEHFPEI--------LEKMEH 564
                 +LK +S   C  +RS+ TL+L          C++LE FP +        L+ +E 
Sbjct: 783  DGFGDKLKTMSVRGCINIRSIPTLMLASLEELDLSDCISLESFPIVEDGIPPLMLDSLET 842

Query: 565  LKRIYSDRTPITELPSSFENLPG-LEVLFVEDCSKLDNLP----DNIGSLEYLYYILAAA 619
            L    S+   +   P   +   G L+ L V  C KL ++P    D++  L+  Y      
Sbjct: 843  LD--LSNCYNLESFPLVVDGFLGKLKTLLVGSCHKLRSIPPLKLDSLEKLDLSY----CC 896

Query: 620  SAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
            S  S L     L + L+ L+   C  L + P   L  L    L       +   P  +  
Sbjct: 897  SLESFLSVEDGLLDKLKFLNIECCVMLRNIPWLKLTSLEHFNLSCCYSLDLESFPDILGE 956

Query: 680  LSSLEILYLSGNNFESLPAIIKQMSQLRFIH---------------LEDFNMLQ----SL 720
            + ++  L L     E LP   + ++QL+  H               L +F ++      +
Sbjct: 957  MRNIPGLLLDETTIEELPFPFQNLTQLQTFHPCNCEYVYVPSSMSKLAEFTIMNERMSKV 1016

Query: 721  PELPL------------CLKYLHLIDCKMLQ---SLPVLPFC-LESLDLTGCNMLRSLPE 764
             E  +             +KY+ + DCK+     SL ++ F  ++ L LT          
Sbjct: 1017 AEFTIQNEEKVYAIQSAHVKYICIRDCKLSDEYLSLNLMLFANVKELHLTNIQFTVLPKS 1076

Query: 765  LPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQEL--DASVLE 820
            +  C  L  L L+DC  L+ +   P  L++L+  NC  L S  + +L  QEL  D +   
Sbjct: 1077 IEKCHFLWKLVLDDCKDLQEIKGNPPSLKMLSALNCISLTSSCKSILVKQELHEDGNTWF 1136

Query: 821  KLSKHSPDLQWAPESLKSAAICFEFTN 847
            +L +      +  +S    +I F F N
Sbjct: 1137 RLPQTKIPEWFDHQSEAGLSISFWFLN 1163


>gi|105923235|gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1139

 Score =  220 bits (560), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 200/638 (31%), Positives = 295/638 (46%), Gaps = 124/638 (19%)

Query: 4   SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
           +D V+ VGI+GMGGIGKTT+AKA+F++  +EFEGSC + +++  SE   GL  LQ+Q++S
Sbjct: 399 TDDVRTVGIYGMGGIGKTTIAKAVFNELCNEFEGSCCLLNIKEISEQPSGLVQLQEQLIS 458

Query: 64  TTLSEKLEVAGPNIPH---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIV 120
             +  K      N+       KER+   ++L+VLDD++++ QL  L+GE + FG GSR++
Sbjct: 459 DLIQSK-TFKINNVDRGSALIKERLCHKRVLVVLDDLDQLKQLGALMGERNWFGLGSRVI 517

Query: 121 VTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTK 180
           +TTRD+ +L + +   K  Y V  L  +E+ + F   AFKEN   E+    S+ VV Y  
Sbjct: 518 ITTRDEHLLTQLQVHNK--YLVEELNHDESLQLFIAHAFKENRPTEEFLGISKGVVQYVG 575

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKL-TPRVKSIFL 239
           G PL LEVLGS LC +    W                     L+ISFN L    +K IFL
Sbjct: 576 GLPLALEVLGSYLCKRSIGEWRSARK----------------LQISFNALDDDDIKGIFL 619

Query: 240 DIACFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSISG-NFLNMHDILQEMGRQIV 295
           DI CFF G D D+V+ +LD     S + +++L+ +SL++ +  N L MHD+L++MGR+I+
Sbjct: 620 DITCFFIGMDVDYVSKLLDGCGFHSRIGIEVLMQRSLITTNWYNKLRMHDLLRDMGREII 679

Query: 296 RQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLR 355
           R+ S   PGKR RL   K++   L+            + L+++K +NL      +     
Sbjct: 680 REMSPDHPGKRRRLCFQKDVLDALRKK----------MFLNRLKILNLSYSVHLSTP--- 726

Query: 356 LFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFK 415
                 P F  +  L  +  E   S  +V    G           H D+  L  L     
Sbjct: 727 ------PHFMGLPCLERIILEGCTSLVEVHQSIG-----------HLDSLTLLNLEGCKS 769

Query: 416 PKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVT 475
            KNL                     P SI   K L +L+   C +L   P  L  +  +T
Sbjct: 770 LKNL---------------------PESICYLKCLESLNISRCINLEKLPDQLGDMEALT 808

Query: 476 INFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKR-------- 527
           +                    L    +AIE +PSSI  L +L  L L G K         
Sbjct: 809 M--------------------LLADGTAIERLPSSIGHLKNLSNLSLGGFKYDLSSVSWF 848

Query: 528 -------LKRIST------SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTP 574
                    RIS       +F  L SL  L L  C  L    + L  +  L+ +   R  
Sbjct: 849 SHILPWLSPRISNPRALLPTFTGLNSLRRLDLSYC-GLSDGTD-LGGLSSLQELNFTRNK 906

Query: 575 ITELPSSFENLPGLEVLFVEDCSKL---DNLPDNIGSL 609
           +  LP+  + LP L+VL +  C+ L    +LP  + SL
Sbjct: 907 LNNLPNGIDRLPELQVLCLYHCADLLSISDLPSTLHSL 944



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 169/400 (42%), Gaps = 78/400 (19%)

Query: 566  KRIYSDRTPITEL--------PSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-L 616
            K+++ +R  I  L        P  F  LP LE + +E C+ L  +  +IG L+ L  + L
Sbjct: 705  KKMFLNRLKILNLSYSVHLSTPPHFMGLPCLERIILEGCTSLVEVHQSIGHLDSLTLLNL 764

Query: 617  AAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQE 676
                ++  LP S+     L SL+ S C  LE  P   L  + A+ +L     A+  +P  
Sbjct: 765  EGCKSLKNLPESICYLKCLESLNISRCINLEKLPDQ-LGDMEALTMLLADGTAIERLPSS 823

Query: 677  IAYLSSLEILYLSGNNFE---------SLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCL 727
            I +L +L  L L G  ++          LP +  ++S  R + L  F  L SL  L L  
Sbjct: 824  IGHLKNLSNLSLGGFKYDLSSVSWFSHILPWLSPRISNPRAL-LPTFTGLNSLRRLDL-- 880

Query: 728  KYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLP----ELPLCLQYLNLEDCNMLRSL 783
             Y  L D   L  L      L+ L+ T  N L +LP     LP  LQ L L  C  L S+
Sbjct: 881  SYCGLSDGTDLGGLS----SLQELNFTR-NKLNNLPNGIDRLPE-LQVLCLYHCADLLSI 934

Query: 784  PELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICF 843
             +LP  L  L V +C                  + +E+LS HS ++   P+         
Sbjct: 935  SDLPSTLHSLMVYHC------------------TSIERLSIHSKNV---PD--------M 965

Query: 844  EFTNCLKLN-----GKANNK--ILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIV 896
               NC +L+     G   NK  I  D+  ++ +   + L+  ++    E L       I 
Sbjct: 966  YLVNCQQLSDIQGLGSVGNKPLIYVDNCSKLANNFKSLLQASFK---GEHLD------IC 1016

Query: 897  LPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAV 936
            L  SEIPDWFS++  GSSI   +P  S  + LI +  C  
Sbjct: 1017 LRDSEIPDWFSHRGDGSSISFYVPD-SEIQGLIVWIVCGA 1055



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 118/292 (40%), Gaps = 50/292 (17%)

Query: 497 LYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFP 556
           L L  S     P     L  LE + L GC  L  +  S   L SL  L L GC +L++ P
Sbjct: 715 LNLSYSVHLSTPPHFMGLPCLERIILEGCTSLVEVHQSIGHLDSLTLLNLEGCKSLKNLP 774

Query: 557 EILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYIL 616
           E                       S   L  LE L +  C  L+ LPD +G +E L  +L
Sbjct: 775 E-----------------------SICYLKCLESLNISRCINLEKLPDQLGDMEALTMLL 811

Query: 617 AAASAISQLPSSVALSNMLRSLDSSHCKGLE--------------------SFPRTFL-- 654
           A  +AI +LPSS+     L++L +    G +                    S PR  L  
Sbjct: 812 ADGTAIERLPSSIG---HLKNLSNLSLGGFKYDLSSVSWFSHILPWLSPRISNPRALLPT 868

Query: 655 -LGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLED 713
             GL+++  L +S Y       ++  LSSL+ L  + N   +LP  I ++ +L+ + L  
Sbjct: 869 FTGLNSLRRLDLS-YCGLSDGTDLGGLSSLQELNFTRNKLNNLPNGIDRLPELQVLCLYH 927

Query: 714 FNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPEL 765
              L S+ +LP  L  L +  C  ++ L +    +  + L  C  L  +  L
Sbjct: 928 CADLLSISDLPSTLHSLMVYHCTSIERLSIHSKNVPDMYLVNCQQLSDIQGL 979


>gi|357500371|ref|XP_003620474.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495489|gb|AES76692.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1112

 Score =  219 bits (558), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 206/661 (31%), Positives = 322/661 (48%), Gaps = 75/661 (11%)

Query: 1   MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
           +DS D V+++GI GMGGIGKT LA  ++ Q SH F  SCF+ DV     +  G    QKQ
Sbjct: 70  LDSDDGVRVIGICGMGGIGKTALAMTLYGQISHRFSASCFIDDVSKIYRSGDGPLDAQKQ 129

Query: 61  MLSTTLS-EKLEVAGPNIPHFTKERVRRMKL-----LIVLDDVNEVGQLKRLIGELDQFG 114
           +L  T+  E  ++      H++   + R+ L     L++LD+V++VGQL+++    +  G
Sbjct: 130 ILLQTVGIEHNQICN----HYSATNLMRINLCHERALLILDNVDQVGQLEKIAVRREWLG 185

Query: 115 QGSRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFK-ENHCPEDLNWHSR 173
            GSRI++ +RD+ +L+++  +   +Y+V  L   E+   FC  AFK E     D    + 
Sbjct: 186 AGSRIIIISRDEHILKEYGVD--VVYKVPLLNQAESHMLFCRKAFKVEKIIMSDYQNLAD 243

Query: 174 SVVSYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPR 233
            +++Y KG PL + VLGS L  +  + W      L+R+ ES  +++ D+L+ISF+ L   
Sbjct: 244 EILNYAKGLPLAITVLGSFLFGRNVTEWKSA---LSRLRESPDNNVMDVLQISFDGLNLT 300

Query: 234 VKSIFLDIACFFEGEDKDFVASILDDS--ESDV-LDILIDKSLVSISGNFLNMHDILQEM 290
            K +FL IACFF    +  V +IL+     +D+ L +L+DKSL+SI  + + MH +L+E+
Sbjct: 301 EKEMFLHIACFFNFLHEKRVKNILNSCGFHADIGLRVLLDKSLISIDNSIIKMHYLLEEL 360

Query: 291 GRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTN 350
           GR+IV++ S KE  K SRLW  ++I  V+        +E +   L +IK         + 
Sbjct: 361 GRKIVQESSSKEQRKWSRLWSHEQIYNVM--------MEKMVKFLFRIKKTYFH-FCLSK 411

Query: 351 MSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTL 410
           MSNLRL                       +Y    +    + L  KLRY+ W  YP + L
Sbjct: 412 MSNLRLLIII----------------SYGNYGGNVVSESPNCLSNKLRYVEWLEYPFKYL 455

Query: 411 PSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHF 470
           PS+F P  LVEL L  S + Q W  +K     +++      +++        +FP NL +
Sbjct: 456 PSSFHPYELVELILARSSITQLWTNKKYL--PNLRKLDLSHSINLVKIIDFGAFP-NLEW 512

Query: 471 VCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKR 530
                ++   C+NL+                    E+  SI  L  L  L+L GC  L+ 
Sbjct: 513 -----LSLEECINLV--------------------ELDPSIGLLEKLSYLNLDGCYSLES 547

Query: 531 ISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEV 590
           I  +   L SL  L + GC  +   P  L+K +  +    D T  T L      L  L  
Sbjct: 548 IPNNIFSLSSLEDLNMRGCSKVFDDPMHLKKPDISESASQDSTD-TYLLPLLCRLYLLRT 606

Query: 591 LFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFP 650
           + +  C +L  +PD I  L  L  +    +    LPS   LS ++  L+  HC+ LES P
Sbjct: 607 VDISFC-RLSQVPDAIECLSSLERLNLGGNYFVTLPSLWKLSKLVY-LNLEHCELLESLP 664

Query: 651 R 651
           +
Sbjct: 665 Q 665



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 146/379 (38%), Gaps = 88/379 (23%)

Query: 602 LPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGL------ESFPRTFLL 655
           LP +    E +  ILA +S I+QL ++      LR LD SH   L       +FP    L
Sbjct: 455 LPSSFHPYELVELILARSS-ITQLWTNKKYLPNLRKLDLSHSINLVKIIDFGAFPNLEWL 513

Query: 656 GLS----------AMGLLHISDY-------AVREIPQEIAYLSSLEILYLSGNN--FE-- 694
            L           ++GLL    Y       ++  IP  I  LSSLE L + G +  F+  
Sbjct: 514 SLEECINLVELDPSIGLLEKLSYLNLDGCYSLESIPNNIFSLSSLEDLNMRGCSKVFDDP 573

Query: 695 ---SLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESL 751
                P I +  SQ          + +      + + +     C++ Q +P    CL SL
Sbjct: 574 MHLKKPDISESASQDSTDTYLLPLLCRLYLLRTVDISF-----CRLSQ-VPDAIECLSSL 627

Query: 752 DLT--GCNMLRSLPELPLC--LQYLNLEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEI 807
           +    G N   +LP L     L YLNLE C +L SLP+LP    +   R  N+  +   +
Sbjct: 628 ERLNLGGNYFVTLPSLWKLSKLVYLNLEHCELLESLPQLPSPTTIGRDRRENKWWTTGLV 687

Query: 808 LLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRI 867
           +    +L  S  E+    S    W  + +K+                             
Sbjct: 688 IFNCPKLAES--EREHCRSMTFSWMAQFIKA----------------------------- 716

Query: 868 RHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQLPP--HSSC 925
                      Y  +    L E     IV+PGSEIP+W +N S G SI I+  P  H + 
Sbjct: 717 -----------YPHSYPAYLDEFH---IVVPGSEIPNWINNHSMGDSIPIEFSPPMHDNI 762

Query: 926 RNLIGFAFCAVLDSKKVDS 944
            ++IGF  CAV      DS
Sbjct: 763 NDIIGFVCCAVFSVAPPDS 781



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 23/165 (13%)

Query: 582 FENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDS 640
           F   P LE L +E+C  L  L  +IG LE L Y+ L    ++  +P+++   + L  L+ 
Sbjct: 504 FGAFPNLEWLSLEECINLVELDPSIGLLEKLSYLNLDGCYSLESIPNNIFSLSSLEDLNM 563

Query: 641 SHCKGLESFPRTF---------------------LLGLSAMGLLHISDYAVREIPQEIAY 679
             C  +   P                        L  L  +  + IS   + ++P  I  
Sbjct: 564 RGCSKVFDDPMHLKKPDISESASQDSTDTYLLPLLCRLYLLRTVDISFCRLSQVPDAIEC 623

Query: 680 LSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELP 724
           LSSLE L L GN F +LP++ K +S+L +++LE   +L+SLP+LP
Sbjct: 624 LSSLERLNLGGNYFVTLPSLWK-LSKLVYLNLEHCELLESLPQLP 667


>gi|105922664|gb|ABF81429.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1107

 Score =  219 bits (557), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 194/596 (32%), Positives = 290/596 (48%), Gaps = 75/596 (12%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
           KTT+A+ ++D+   +FEGSCF+++VR       G   LQ+Q+LS  L E+  V   +   
Sbjct: 285 KTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGRRRLQEQLLSEILMERASVWDSSRGI 344

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K R+R  K+L++LDDV++  QL+ L  E   FG GSRI++T+RDK+V+        +
Sbjct: 345 EMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPGSRIIITSRDKKVVTG--NNNNR 402

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY    L  ++A   F   A K +H  ED    S+ VV Y  G PL LEV+GS L  +  
Sbjct: 403 IYEAEKLNDDDALMLFSQKASKNDHPAEDFVELSKQVVGYANGLPLALEVIGSFLYDRSI 462

Query: 199 SHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVASILD 258
             W   ++ +N I   +   I D+L+ISF+ L    K IFLDIACF  G   D +  IL+
Sbjct: 463 PEWKSAINRMNEIPHGK---IIDVLRISFDGLHESDKKIFLDIACFLMGFKIDRITRILE 519

Query: 259 DSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPKEI 315
                    + ILI+KSL+S+S + + MH++LQ MG++IVR ES +EPG+RSRLW  +++
Sbjct: 520 SRGFHAGIGIPILIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDV 579

Query: 316 SRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFY------VPKFYEIEK 369
              L  N  ++  E    DLS               + LR  +++      +P   ++++
Sbjct: 580 CLALMDNTLSEGPE----DLS---------------NKLRFLEWHSYPSKSLPAGLQVDE 620

Query: 370 LPSM----STEEQLSYS--------KVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPK 417
           L  +    S+ EQL Y          + L N L+ +          T     +P      
Sbjct: 621 LVELHMANSSIEQLWYGCKSAVNLKIINLSNSLNLI---------KTPDFTGIP------ 665

Query: 418 NLVELNLR-CSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTI 476
           NL  L L  C+ + +        V  S+   K L  ++   CQS+R  PSNL        
Sbjct: 666 NLENLILEGCTSLSE--------VHPSLARHKKLQHVNLVHCQSIRILPSNLEMESLKVF 717

Query: 477 NFSYCVNLIEFPQISGKVT---RLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRIST 533
               C  L  FP I G +     L L  + I E+ SSI  L  L +L +  CK L+ I +
Sbjct: 718 TLDGCSKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPS 777

Query: 534 SFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRI--YSDRTPITELPSSFENLPG 587
           S   L+SL  L L  C  L++ PE L K+E L+    +S+  P   +      +PG
Sbjct: 778 SIGCLKSLKKLDLSCCSALKNIPENLGKVESLEEFDGFSNPRPGFGIAVPGNEIPG 833



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 125/259 (48%), Gaps = 36/259 (13%)

Query: 386 LPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQ 445
           L  G + L  KLR+L W +YP ++LP+  +   LVEL++  S +EQ W G K+ V     
Sbjct: 588 LSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIEQLWYGCKSAV----- 642

Query: 446 NFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISG--KVTRLYL-GQS 502
           N K                           IN S  +NLI+ P  +G   +  L L G +
Sbjct: 643 NLK--------------------------IINLSNSLNLIKTPDFTGIPNLENLILEGCT 676

Query: 503 AIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKM 562
           ++ EV  S+     L+ ++L  C+ + RI  S  ++ SL    L GC  LE FP+I+  M
Sbjct: 677 SLSEVHPSLARHKKLQHVNLVHCQSI-RILPSNLEMESLKVFTLDGCSKLERFPDIVGNM 735

Query: 563 EHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYI-LAAASA 621
             L  +  D T I EL SS  +L GL +L + +C  L+++P +IG L+ L  + L+  SA
Sbjct: 736 NCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPSSIGCLKSLKKLDLSCCSA 795

Query: 622 ISQLPSSVALSNMLRSLDS 640
           +  +P ++     L   D 
Sbjct: 796 LKNIPENLGKVESLEEFDG 814



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 156/360 (43%), Gaps = 40/360 (11%)

Query: 615 ILAAASAISQLPSSVALSNMLRSLDSS--HCKGLESFPRTFLLGLSAMGLLHISDYAVRE 672
           IL   S IS     V + N+L+ +      C+  E   R   L       L + D  + E
Sbjct: 531 ILIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDNTLSE 590

Query: 673 IPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLP--ELPLCLKYL 730
            P++++  + L  L       +SLPA + Q+ +L  +H+ + ++ Q     +  + LK +
Sbjct: 591 GPEDLS--NKLRFLEWHSYPSKSLPAGL-QVDELVELHMANSSIEQLWYGCKSAVNLKII 647

Query: 731 HLIDCKMLQSLPVLPFC--LESLDLTGCNMLRSL-PELPLC--LQYLNLEDCNMLRSLP- 784
           +L +   L   P       LE+L L GC  L  + P L     LQ++NL  C  +R LP 
Sbjct: 648 NLSNSLNLIKTPDFTGIPNLENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIRILPS 707

Query: 785 ELPL-CLQLLTVRNCNRLQSLPEIL-----LCLQELDASVLEKLSKHSPDLQWAPESLKS 838
            L +  L++ T+  C++L+  P+I+     L +  LD + + +LS     L         
Sbjct: 708 NLEMESLKVFTLDGCSKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHL--------I 759

Query: 839 AAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLR-LGYEMAINEKLSELRGSL--- 894
                  TNC  L    ++     SL ++     ++L+ +   +   E L E  G     
Sbjct: 760 GLGLLSMTNCKNLESIPSSIGCLKSLKKLDLSCCSALKNIPENLGKVESLEEFDGFSNPR 819

Query: 895 ----IVLPGSEIPDWFSNQSSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKVDSDCFRYF 950
               I +PG+EIP WF+++S GSSI +Q+P        +GF  C   ++       F +F
Sbjct: 820 PGFGIAVPGNEIPGWFNHRSKGSSISVQVPS-----GRMGFFACVAFNANDESPSLFCHF 874



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 31/210 (14%)

Query: 561 KMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAAS 620
           +++ L  ++   + I +L    ++   L+++ + +   L   PD  G       IL   +
Sbjct: 617 QVDELVELHMANSSIEQLWYGCKSAVNLKIINLSNSLNLIKTPDFTGIPNLENLILEGCT 676

Query: 621 AISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYL 680
           ++S++  S+A    L+ ++  HC+ +   P                             +
Sbjct: 677 SLSEVHPSLARHKKLQHVNLVHCQSIRILPSNL-------------------------EM 711

Query: 681 SSLEILYLSG-NNFESLPAIIKQMSQLRFIHLEDFNM--LQSLPELPLCLKYLHLIDCKM 737
            SL++  L G +  E  P I+  M+ L  + L+   +  L S     + L  L + +CK 
Sbjct: 712 ESLKVFTLDGCSKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKN 771

Query: 738 LQSLPVLPFCLES---LDLTGCNMLRSLPE 764
           L+S+P    CL+S   LDL+ C+ L+++PE
Sbjct: 772 LESIPSSIGCLKSLKKLDLSCCSALKNIPE 801


>gi|13509229|emb|CAC35334.1| N2-D protein [Linum usitatissimum]
          Length = 1108

 Score =  219 bits (557), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 241/865 (27%), Positives = 397/865 (45%), Gaps = 129/865 (14%)

Query: 1    MDSSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQ 60
            +DSS + +I+GI GMGG+GKTTLAKA++D+ S +FE   F+ ++R       G+  LQ +
Sbjct: 227  LDSSTSEKIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENIRDTLLEKNGVSILQNK 286

Query: 61   MLSTTLSEKLEVA--GPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSR 118
            ++S  L +    A    +     ++RV R KLLIVLDDV+E  Q   ++G+ + F   SR
Sbjct: 287  IISGILRKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQFDDVLGKFENFSTDSR 346

Query: 119  IVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSY 178
             ++TTRD R LE  R  E K++ +  +  + +   F   AF  +   ED    S+     
Sbjct: 347  FLITTRDVRGLELLR--ECKMFELQEMSPDHSLTLFNKHAFGVDSPQEDYAILSKDFSQP 404

Query: 179  TKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIF 238
              G PL ++V+GS L    K  W + L +L +I  +++    + LKIS+N+LT   + IF
Sbjct: 405  AAGLPLYIKVIGSLLYRMDKIFWEEKLEELKKISPTKVQ---ERLKISYNELTHTERQIF 461

Query: 239  LDIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGNFLN--------MHDI 286
            LD AC+F    K     + +D    SES +   L  +SL+ +   ++         MHD 
Sbjct: 462  LDXACYFIESFKIGPMLMWNDCDFYSESTIRS-LTQRSLIKLQKPYIKGADIDMFWMHDH 520

Query: 287  LQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPR 346
            ++++GR IVR+E  + P KRSR+W  K+   +LKH KGTD +E + +D+ K +   L  +
Sbjct: 521  VRDLGRAIVREEKNQNPYKRSRIWSNKDAVDMLKHKKGTDWVEILEVDM-KFEDFMLTDK 579

Query: 347  AFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP 406
             F  ++ LR  K              +S        K  LPN        LR+L   +  
Sbjct: 580  EFEKLTRLRYLK--------------VSNGRLAGDFKDVLPN--------LRWLRLKSCD 617

Query: 407  LRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPS 466
              ++P+    K LV L L    V   W+G      + ++  + L A+S K C  L+  P 
Sbjct: 618  --SIPTGLYLKKLVTLQLVDCSVRDGWKGW-----NELKVARKLKAVSLKRCFHLKKVPD 670

Query: 467  NLHFVCPVTINFSYCVNL-------------------IEFPQISGKVTRL----YL--GQ 501
                     ++F  C N+                    +  +I G++ RL    YL    
Sbjct: 671  FSDCEDLECLDFEECRNMRGEVDIGNFKSLRYLLISNTKITKIKGEIGRLLNLKYLLASD 730

Query: 502  SAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEK 561
            S+++EVP+ I  L+ L+ L L      K   T    L + +TL+ +     +  P+    
Sbjct: 731  SSLKEVPAGISKLSSLKNLSLALIDPYKSDFTEM--LPASLTLLYISNDTQKFCPDT--S 786

Query: 562  MEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASA 621
             E+L+R+ +    I  L     ++   E+L              +G L+ L Y+      
Sbjct: 787  SENLQRLPNLSNLINLLILHLRDVGIGEIL-------------GLGELKMLEYL-----D 828

Query: 622  ISQLPSSVALSN-----MLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISD----YAVRE 672
            I + P  V L       +L+ L    C  ++  P   L+ L+ + LL I D      +  
Sbjct: 829  IGRAPRIVHLDGLENLVLLQHLRVEGCPIIKKLPS--LVALTRLELLWIQDCPLVTEING 886

Query: 673  IPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRFIHL-------EDFNMLQSLPELP 724
            + Q    LS L+++  S     ESL +++K + +L  +            +M   L EL 
Sbjct: 887  MGQLWESLSHLKVVGCSALIGLESLHSMVK-LERLLLVGCVLTETMPPSLSMFTKLTELS 945

Query: 725  LC-LKYLHLIDCKMLQSLPVL--PFCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLR 781
            LC + +    D   L++L VL   FC E +++ G + L S       L++L++E C  +R
Sbjct: 946  LCAMPWKQFPDLSNLKNLRVLCMSFCQELIEVPGLDALES-------LKWLSMEGCRSIR 998

Query: 782  SLPELPLC--LQLLTVRNCNRLQSL 804
             +P+L     L+ L V +C +L+ +
Sbjct: 999  KVPDLSGLKKLKTLDVESCIQLKEV 1023


>gi|297791251|ref|XP_002863510.1| hypothetical protein ARALYDRAFT_494460 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309345|gb|EFH39769.1| hypothetical protein ARALYDRAFT_494460 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1188

 Score =  219 bits (557), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 203/703 (28%), Positives = 314/703 (44%), Gaps = 89/703 (12%)

Query: 3   SSDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQML 62
           + +  +IVG+ GM GIGKT LA+ +F +   +     F+   R  SE  G  E L+K+++
Sbjct: 237 NDNETRIVGVVGMPGIGKTYLARKLFVKLKKKINHCVFIEFEREKSEEQGS-EWLEKRLV 295

Query: 63  STTLSEKLEVAGPNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVT 122
            + L  K      N     K+ +   K+ IVLD+V+E     +         +GS+IV+T
Sbjct: 296 ESLLDIK-NCTDTNALVVWKDSLINKKVTIVLDNVSEKKHWIK---------KGSKIVIT 345

Query: 123 TRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH--SRSVVSYTK 180
           TRDK + E   G    +Y V GL   +  E F   A     C  D N+   SR  V Y  
Sbjct: 346 TRDKSLTE---GLVSDLYEVPGLNERDGLELFRAQAC----CTLDGNFMELSRKFVDYAG 398

Query: 181 GNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLD 240
           GNPL LE  G  L  K   HW   L  L +     I +    L+ S+++L    K  FLD
Sbjct: 399 GNPLALEQFGKELRGKDVVHWETRLGTLAQCSNPTIREK---LRSSYDELNELQKDAFLD 455

Query: 241 IACFFEGEDKDFVASILDDSESDVLDI------LIDKSLVSISGNFLNMHDILQEMGRQI 294
           IA FF  +D+ +V S+LD  + +  +       L DK L+ +    + MHD+L  M +++
Sbjct: 456 IAYFFRSQDESYVRSLLDSCDPESAESGHEFRDLADKFLIGVCDGRVEMHDLLFTMAKEL 515

Query: 295 VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNL 354
           V   ++K     S   + +     L   +G D + GI LD+SK+    L    F  MS+L
Sbjct: 516 VEATADKSRLLLSNCAELRNKELSLDQ-QGRDKVRGIVLDMSKMDETPLKREVFVGMSSL 574

Query: 355 RLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPK--KLRYLHWDTYPLRTLPS 412
           R  K Y           S+      +  K+ LP+GL++ PK   +RYLHW  +P   LPS
Sbjct: 575 RYLKVY----------NSLCPPHSETECKLNLPDGLEF-PKDNAVRYLHWVKFPGTELPS 623

Query: 413 NFKPKNLVELNLRCSKVEQPWEGEKAC--------------------------------- 439
           +F P NL++L L  S +   W   K                                   
Sbjct: 624 DFDPNNLIDLKLPYSNIITVWICTKVAPNLKWVDLSHSSNLNSLMGLLKAPNLLRLNLEG 683

Query: 440 ------VPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQISGK 493
                 +P  ++    L  L+ +GC SL S P  +      T+  S C  L  F  IS  
Sbjct: 684 CTSLKELPDEMKEMTNLVFLNLRGCTSLLSLPK-ITMDSLKTLILSGCSKLQTFDVISEH 742

Query: 494 VTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCLNLE 553
           +  LYL  ++I  +P +I  L  L +L+L+ CK L  +     +L+SL  L L  C  L+
Sbjct: 743 LESLYLNGTSINGLPPAIGNLHRLILLNLKDCKNLATLPDCLWELKSLQELKLSRCSELK 802

Query: 554 HFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLY 613
            FP++ +K+E L+ +  D T I E+P +  +   L  L +     +  L  ++G + +L 
Sbjct: 803 MFPDVKKKVESLRVLLLDGTSIAEMPGNIFDFSLLRRLCLSRNDNIRTLRFDMGQMFHLK 862

Query: 614 YI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESF--PRTF 653
           ++ L     ++ LP    L   L+ L++  C  L +   P+T 
Sbjct: 863 WLELKWCKNLTSLP---ILPPNLQCLNAHGCTSLRTVASPQTL 902



 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 150/625 (24%), Positives = 243/625 (38%), Gaps = 130/625 (20%)

Query: 489  QISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLG 548
            Q   KV  + L  S ++E P   E    +  L      R  ++  S C   S     L  
Sbjct: 543  QGRDKVRGIVLDMSKMDETPLKREVFVGMSSL------RYLKVYNSLCPPHSETECKL-- 594

Query: 549  CLNLEHFPEILE--KMEHLKRIYSDRTPITELPSSFE-------NLPGLEVLFVEDCSKL 599
                 + P+ LE  K   ++ ++  + P TELPS F+        LP   ++ V  C+K+
Sbjct: 595  -----NLPDGLEFPKDNAVRYLHWVKFPGTELPSDFDPNNLIDLKLPYSNIITVWICTKV 649

Query: 600  ------------DNLPDNIGSLE---YLYYILAAASAISQLPSSVALSNMLRSLDSSHCK 644
                         NL   +G L+    L   L   +++ +LP  +     L  L+   C 
Sbjct: 650  APNLKWVDLSHSSNLNSLMGLLKAPNLLRLNLEGCTSLKELPDEMKEMTNLVFLNLRGCT 709

Query: 645  GLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMS 704
             L S P+  +  L  + L   S     ++  E      LE LYL+G +   LP  I  + 
Sbjct: 710  SLLSLPKITMDSLKTLILSGCSKLQTFDVISE-----HLESLYLNGTSINGLPPAIGNLH 764

Query: 705  QLRFIHLEDFNMLQSLPELPLCLKYLH---LIDCKMLQSLPVLPFCLESLD---LTGCNM 758
            +L  ++L+D   L +LP+    LK L    L  C  L+  P +   +ESL    L G   
Sbjct: 765  RLILLNLKDCKNLATLPDCLWELKSLQELKLSRCSELKMFPDVKKKVESLRVLLLDGT-- 822

Query: 759  LRSLPELP-----------LC-------------------LQYLNLEDCNMLRSLPELPL 788
              S+ E+P           LC                   L++L L+ C  L SLP LP 
Sbjct: 823  --SIAEMPGNIFDFSLLRRLCLSRNDNIRTLRFDMGQMFHLKWLELKWCKNLTSLPILPP 880

Query: 789  CLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLSKHSPDLQWAPESLKSAAICFEFTNC 848
             LQ L    C  L+++                     SP  Q  P   +     F FTNC
Sbjct: 881  NLQCLNAHGCTSLRTVA--------------------SP--QTLPTPTEQIHSTFIFTNC 918

Query: 849  LKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINEKLSELRGSLIVLPGSEIPDWFSN 908
             +L   + N I+  S ++ +   +++ R   +      +          PG EIP WF++
Sbjct: 919  HELEQVSKNAII--SYVQKKSKLMSADRYNPDFVFKSLIG------TCFPGCEIPAWFNH 970

Query: 909  QSSGSSICIQLPPH-SSCRNLIGFAFCAVLDSKKVDSDCFRYFYVSFQFDLEIKTLSETK 967
            QS GS + ++LP   ++   +IG A C V+  K+   D      V   ++    +LS   
Sbjct: 971  QSLGSVLTLELPQDWNAAGKIIGIALCVVVSFKEY-RDQNNSLQVKCTWEFTNVSLSPES 1029

Query: 968  HVDLGYNSRYIED-LIDSDRVILGFKPCLNVG----FPD------GYHHTIATFKFFAER 1016
             +  G++    E   ++SD   + +   L +     FP       G+  T  T    +E 
Sbjct: 1030 FMVGGWSEPGEETHTVESDHTFISYTSLLTIKNRQQFPSATEISLGFQVTNGT----SEV 1085

Query: 1017 KFYKIKRCGLCPVYANPSETKDNTF 1041
            +  K+ +CG   VY  P+E  + ++
Sbjct: 1086 EKCKVIKCGFSLVY-EPNEANNTSW 1109


>gi|297848238|ref|XP_002892000.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337842|gb|EFH68259.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 207/699 (29%), Positives = 329/699 (47%), Gaps = 99/699 (14%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQ 58
           D V+++GIWG  GIGKTT+A+ +F+Q S  F+ S  + D++G+       E    L+ LQ
Sbjct: 213 DEVRMIGIWGPPGIGKTTIARFLFNQVSSRFQNSALIEDIKGSYPKPCFDEYNAKLQ-LQ 271

Query: 59  KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            +MLS  +++K       IPH    +ER+R   + +VLDDV+ + QL+ L   +  FG  
Sbjct: 272 YKMLSRMINQK----DIMIPHLGVAQERLRNRNVFLVLDDVDRLAQLEALANNVQWFGPR 327

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++TT D+ +L         IY+V     +EA + FC +AF +   P+D  +     +
Sbjct: 328 SRIIITTEDRSLLNAHGINH--IYKVGFPSNDEALQMFCMYAFGQ-KSPKDGFYELAREI 384

Query: 177 SYTKGN-PLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVK 235
           +Y  G  PL L V+GS      K  W     +++R+  +   DI  ILK SF+ L    K
Sbjct: 385 TYLVGELPLGLRVIGSHFRGLSKEQWS---MEISRLRTNLDGDIESILKFSFDALCDEDK 441

Query: 236 SIFLDIACFFEGED----KDFVASILDDSESDVLDILIDKSLVSISGNFL-----NMHDI 286
            +FL IACFF  E+    ++F+     D  S  L +L++KSL+SI   FL      MH++
Sbjct: 442 DLFLHIACFFNNENINKLEEFIGQRFKDL-SQRLYVLVEKSLISIE-RFLEYVSIKMHNL 499

Query: 287 LQEMGRQIVRQESEKEPGKRSRLWDPKEISRVLK-HNKGTDAIEGIFLDLSKIKGINLDP 345
           L ++G++IVR+ES +EPG+R  L+D K+I  V+  +   T ++ GI  D      +N+  
Sbjct: 500 LAQLGKEIVRKES-REPGQRRFLFDNKDICEVVSGYTTNTGSVVGIDSD----SWLNITE 554

Query: 346 RAFTNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTY 405
           +AF  M NL+  +  V  F     + S                 L ++  KLR + W  +
Sbjct: 555 KAFEGMPNLQFLRVVVYNFDHPNIISSSGP--------------LTFISSKLRLIEWWYF 600

Query: 406 PLRTLPSNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
           P+ +L      + LVEL +R SK+E+ W+G        I+  + L  +     ++L+  P
Sbjct: 601 PMTSLRFINNLEFLVELKMRYSKLEKLWDG--------IKLLRNLKCMDLANSENLKELP 652

Query: 466 SNLHFVCPV-TINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLE----VL 520
            NL     +  +N   C +L+E P   G +T L   Q    E  S +  L  L     VL
Sbjct: 653 -NLSMATSLEELNLEGCSSLVELPSSVGNLTNL---QKLSLEGCSRLVSLPQLPDSPMVL 708

Query: 521 DLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPS 580
           D   C+ L+++  SF      + L    C  L       E  + L +  + R  +     
Sbjct: 709 DAENCESLEKLDCSF--YNPCIHLNFANCFKLNQ-----EARDLLIQTSTARLVV----- 756

Query: 581 SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS 640
               LPG        CS+L +LP    SL     +L A +  S      + SN    L+ 
Sbjct: 757 ----LPG--------CSRLVSLPQLPDSL----MVLNAENCESLEKLDCSFSNPGTWLNF 800

Query: 641 SHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAY 679
           S+C  L    R  L+  S++ ++ +     +E+P    Y
Sbjct: 801 SYCFKLNKEARDLLIQTSSVNVVVL---PCKEVPACFTY 836



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 108/274 (39%), Gaps = 68/274 (24%)

Query: 677 IAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLC--LKYLHLID 734
           + +L  L++ Y   +  E L   IK +  L+ + L +   L+ LP L +   L+ L+L  
Sbjct: 611 LEFLVELKMRY---SKLEKLWDGIKLLRNLKCMDLANSENLKELPNLSMATSLEELNLEG 667

Query: 735 CKMLQSLPVLP---FCLESLDLTGCNMLRSLPELPLCLQYLNLEDCNMLRSL-------- 783
           C  L  LP        L+ L L GC+ L SLP+LP     L+ E+C  L  L        
Sbjct: 668 CSSLVELPSSVGNLTNLQKLSLEGCSRLVSLPQLPDSPMVLDAENCESLEKLDCSFYNPC 727

Query: 784 -------------PELPLCLQLLTVR-----NCNRLQSLPEILLCLQELDASVLEKLSKH 825
                            L +Q  T R      C+RL SLP++   L  L+A   E L K 
Sbjct: 728 IHLNFANCFKLNQEARDLLIQTSTARLVVLPGCSRLVSLPQLPDSLMVLNAENCESLEKL 787

Query: 826 SPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAINE 885
                    S  +      F+ C KLN +A + ++  S + +                  
Sbjct: 788 DC-------SFSNPGTWLNFSYCFKLNKEARDLLIQTSSVNV------------------ 822

Query: 886 KLSELRGSLIVLPGSEIPDWFSNQSSGSSICIQL 919
                    +VLP  E+P  F+ +  G+S+ ++L
Sbjct: 823 ---------VVLPCKEVPACFTYRGYGNSVTVKL 847


>gi|359493295|ref|XP_002273513.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 577

 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/345 (39%), Positives = 204/345 (59%), Gaps = 15/345 (4%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIPH 79
           KTTLAK I++Q +H+FEG+ F+S+V    E  G L+ LQ+Q+L+  L EK+     NI  
Sbjct: 224 KTTLAKGIYNQIAHQFEGASFLSNVAEVKEHRGSLK-LQRQLLADILGEKIARI-SNIDE 281

Query: 80  ---FTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEE 136
                K+ +   K+LI+LDDV+ + QL+ L G    FG GSRI++T+R+K +L+    E 
Sbjct: 282 GISLIKKTLCSRKVLIILDDVSALTQLEFLAGSRHWFGSGSRIIITSRNKHLLDVL--EV 339

Query: 137 KKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWH-SRSVVSYTKGNPLVLEVLGSSLCL 195
             +Y V  L+ EEAF+ F  +AF+ +H  +D  W  S   ++Y  G PL ++V+G  L  
Sbjct: 340 DGLYEVQKLKSEEAFKLFSLYAFEADH--DDGFWELSGRALNYCDGLPLAVKVVGGYLRN 397

Query: 196 KRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFLDIACFFEGEDKDFVAS 255
           K +  W   L  L  + +  +  +   L++S+++L    K +FLDIACFF G+D D V  
Sbjct: 398 KTELEWEDELLKLTTVGQITVQYV---LRLSYDRLEHTEKDLFLDIACFFRGKDSDSVGR 454

Query: 256 ILDDSESDV--LDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLWDPK 313
           ILD        + +L D S +SI  N + MH ++Q+M  +I+R+ES  +PG+RSRLW+P+
Sbjct: 455 ILDSCNFSAIGMKVLKDCSFISILDNKIEMHGLMQQMEWEIIRRESPGQPGQRSRLWNPE 514

Query: 314 EISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFK 358
           ++  VL    GT AIEGI  D+S  K I +   A   M+NLRL +
Sbjct: 515 DVHAVLTQKTGTKAIEGISFDVSASKEIQITSEALKKMTNLRLLR 559


>gi|357499531|ref|XP_003620054.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355495069|gb|AES76272.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 1101

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 191/605 (31%), Positives = 284/605 (46%), Gaps = 105/605 (17%)

Query: 20  KTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLSTTLSEKLEVAGPNIP- 78
           KTTLA+A+++   ++FE  CF+ +VR NS     L++LQ+Q+LS ++     +   N   
Sbjct: 233 KTTLAEAVYNSIVNQFECRCFLYNVRENS-FKHSLKYLQEQLLSKSIGYDTPLEHDNEGI 291

Query: 79  HFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRIVVTTRDKRVLEKFRGEEKK 138
              K+R+ R K+L++LDDV++  QL++L+GE   FGQGSR+++TTRD+ +L        K
Sbjct: 292 EIIKQRLCRKKVLLILDDVDKPNQLEKLVGEPGWFGQGSRVIITTRDRYLLSCHGI--TK 349

Query: 139 IYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYTKGNPLVLEVLGSSLCLKRK 198
           IY  + L  EE+ E      FK +      ++     V Y  G PL L+V+GS+L     
Sbjct: 350 IYEADSLNKEESLELLRKMTFKND---SSYDYILNRAVEYASGLPLALKVVGSNL----- 401

Query: 199 SHWGKVLHDLNRICESEI--------HDIYDILKISFNKLTPRVKSIFLDIACFFEGEDK 250
             +GK + D    CES +         DI  ILK+SF+ L    +S+FLDIAC F+G D 
Sbjct: 402 --FGKSIAD----CESTLDKYERIPPEDIQKILKVSFDTLEEEQQSVFLDIACCFKGCD- 454

Query: 251 DFVASILDDSESDVLDILIDKSLVSISGNFLNMHDILQEMGRQIVRQESEKEPGKRSRLW 310
                     +     I+I       +   + +HD+++ MG +IVRQES KEPG+R+RLW
Sbjct: 455 ------WQKFQRHFNFIMISAPDPYYTSYIVTLHDLIEYMGIEIVRQESIKEPGERTRLW 508

Query: 311 DPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMSNLRLFKFYVPKFYEIEKL 370
              +I+ VLK N GT  IE I+L+ S ++ IN++ +AF                      
Sbjct: 509 RHDDIAHVLKQNTGTSKIEMIYLNCSSMEPININEKAFK--------------------- 547

Query: 371 PSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYPLRTLPSNFKPKNLVELNLRCSKVE 430
             M   + L   K     GL YLPK L  L W  +    L   F  K  + +NLR     
Sbjct: 548 -KMKKLKTLIIEKGYFSKGLKYLPKSLIVLKWKGFTSEPLSFCFSFKKKL-MNLR----- 600

Query: 431 QPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFPSNLHFVCPVTINFSYCVNLIEFPQI 490
                                 L+F     L   P        + ++F  C NL      
Sbjct: 601 ---------------------ILTFDCSDYLTHIPDVSGLPELIRLSFQNCKNLTT---- 635

Query: 491 SGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGCKRLKRISTSFCKLRSLVTLILLGCL 550
                           + +S+  L  LE+LD   C++LK      C L SL  L L  C 
Sbjct: 636 ----------------IHNSVGYLYKLEILDATMCRKLKSFP-PLC-LPSLKKLELHFCR 677

Query: 551 NLEHFPEILEKMEHLKRIYSDRTPITELPSSFENLPGLEVLFVEDCSKLDNLPDNIGSLE 610
           +L+ FPE+L KM ++K I+   T I E+P SF+NL  L+ L + D      LP  +    
Sbjct: 678 SLKSFPELLCKMSNIKEIWLCDTSIEEMPFSFKNLNELQKLVIMD-KNFKILPKCLSECH 736

Query: 611 YLYYI 615
           YL ++
Sbjct: 737 YLEHL 741



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 7/188 (3%)

Query: 595 DCSK-LDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTF 653
           DCS  L ++PD  G  E +         ++ + +SV     L  LD++ C+ L+SFP   
Sbjct: 605 DCSDYLTHIPDVSGLPELIRLSFQNCKNLTTIHNSVGYLYKLEILDATMCRKLKSFPPLC 664

Query: 654 LLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLED 713
           L  L  + L H    +++  P+ +  +S+++ ++L   + E +P   K +++L+ + + D
Sbjct: 665 LPSLKKLEL-HFCR-SLKSFPELLCKMSNIKEIWLCDTSIEEMPFSFKNLNELQKLVIMD 722

Query: 714 FNMLQSLPE-LPLC--LKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQ 770
            N  + LP+ L  C  L++L+L  C+ L+ +  +P  L +L   GC  L S     L  Q
Sbjct: 723 KN-FKILPKCLSECHYLEHLYLDYCESLEEIRGIPPNLTNLYAEGCKSLSSSSRRMLLSQ 781

Query: 771 YLNLEDCN 778
            L+   CN
Sbjct: 782 RLHDAGCN 789


>gi|215261581|gb|ACJ64861.1| disease resistance protein RPP1-like protein R7 [Arabidopsis
           thaliana]
          Length = 1135

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 217/761 (28%), Positives = 345/761 (45%), Gaps = 124/761 (16%)

Query: 5   DTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGN------SETAGGLEHLQ 58
           D V+++GIWG  GIGKTT+A+ + +Q S  F+ S  + +++G        E +  L+ LQ
Sbjct: 322 DEVRMIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYRRPCFDEYSAQLQ-LQ 380

Query: 59  KQMLSTTLSEKLEVAGPNIPHF--TKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQG 116
            QMLS  ++ K       I H    +ER+R  K+ +VLD+V+++GQL  L  E   FG G
Sbjct: 381 NQMLSQMINHK----DIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPG 436

Query: 117 SRIVVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVV 176
           SRI++TT D  VL K  G    +Y+V      EAF+ FC  AF +    E  +  +R V+
Sbjct: 437 SRIIITTEDLGVL-KAHG-INHVYKVGYPSNYEAFQIFCMNAFGQKQPHEGFDEIAREVM 494

Query: 177 SYTKGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKS 236
           +     PL L+VLGS+L  K K  W + L  L    + +I     I++ SF+ L    K 
Sbjct: 495 ALAGELPLGLKVLGSALRGKSKPEWERTLPRLRTSLDGKIG---SIIQFSFDALCDEDKY 551

Query: 237 IFLDIACFFEGEDKDFVASILDDSESDV---LDILIDKSLVSISGNFLNMHDILQEMGRQ 293
           +FL IAC F  +    V  +L +  S V   LD+L +KSL+SI    + MH +L++ G +
Sbjct: 552 LFLYIACLFNFQSVHRVEEVLANKFSHVRHGLDVLDEKSLISIKNGRIFMHTLLEQFGIE 611

Query: 294 IVRQESEKEPGKRSRLW-DPKEISRVLKHNKGTDAIEGIFLDLSKIKGINLDPRAFTNMS 352
             R++      ++ +L    ++I  VL  +                          T + 
Sbjct: 612 TSRKQFVHHGYRKHQLLVGERDICEVLDDDT-------------------------TQLR 646

Query: 353 NLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYL-------HWDTY 405
           NL+        +  +++LP++ST   L   K++  + L  LP  +  L         D  
Sbjct: 647 NLKWMDLSYSSY--LKELPNLSTATNLEELKLRNCSSLVELPSSIEKLISLQILDLQDCS 704

Query: 406 PLRTLPSNFKPKNLVELNL-RCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSF 464
            L  LPS      L +L+L  CS + +        +P SI N   L  LS   C  +   
Sbjct: 705 SLVELPSFGNTTKLKKLDLGNCSSLVK--------LPPSI-NANNLQELSLINCSRVVEL 755

Query: 465 PSNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYL----GQSAIEEVPSSIECLTDLEVL 520
           P+  +      +    C +LIE P   G    L++    G S++ ++PSSI  +T LE  
Sbjct: 756 PAIENATKLRELELQNCSSLIELPLSIGTANNLWILDISGCSSLVKLPSSIGDMTSLEGF 815

Query: 521 DLRGCKRLKRISTSFCKLRSLVTLILLGCLNLEHFPEILEKMEHLKRIYSDRTPITELPS 580
           DL  C  L  + +S   L+ L  L + GC  LE  P  +                     
Sbjct: 816 DLSNCSNLVELPSSIGNLQKLYMLRMCGCSKLETLPTNI--------------------- 854

Query: 581 SFENLPGLEVLFVEDCSKLDNLPDNIGSLEYLYYILAAASAISQLPSSVALSNMLRSLDS 640
              NL  L +L + DCS+L + P+ I +  ++  +    +AI ++P S+   + L   + 
Sbjct: 855 ---NLISLRILNLTDCSQLKSFPE-IST--HISELRLNGTAIKEVPLSITSWSRLAVYEM 908

Query: 641 SHCKGLESFPRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSGNNFESLPAII 700
           S+ + L+ FP                 YA+  I            L L   + + +P  +
Sbjct: 909 SYFESLKEFP-----------------YALDIITD----------LLLVSEDIQEVPPRV 941

Query: 701 KQMSQLRFIHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSL 741
           K+MS+LR + L + N L SLP+L   L Y++  +CK L+ L
Sbjct: 942 KRMSRLRDLRLNNCNNLVSLPQLSNSLAYIYADNCKSLERL 982



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 212/499 (42%), Gaps = 81/499 (16%)

Query: 476  INFSYCVNLIEFPQISGKVT--RLYLGQ-SAIEEVPSSIECLTDLEVLDLRGCKRLKRIS 532
            ++ SY   L E P +S       L L   S++ E+PSSIE L  L++LDL+ C  L  + 
Sbjct: 651  MDLSYSSYLKELPNLSTATNLEELKLRNCSSLVELPSSIEKLISLQILDLQDCSSLVELP 710

Query: 533  TSFCKLRSLVTLILLGCLNLEHFPEILE--KMEHLKRIYSDRTPITELPSSFENLPGLEV 590
             SF     L  L L  C +L   P  +    ++ L  I   R  + ELP+  EN   L  
Sbjct: 711  -SFGNTTKLKKLDLGNCSSLVKLPPSINANNLQELSLINCSR--VVELPA-IENATKLRE 766

Query: 591  LFVEDCSKLDNLPDNIGSLEYLYYI-LAAASAISQLPSSVALSNMLRSLDSSHCKGLESF 649
            L +++CS L  LP +IG+   L+ + ++  S++ +LPSS+     L   D S+C  L   
Sbjct: 767  LELQNCSSLIELPLSIGTANNLWILDISGCSSLVKLPSSIGDMTSLEGFDLSNCSNLV-- 824

Query: 650  PRTFLLGLSAMGLLHISDYAVREIPQEIAYLSSLEILYLSG-NNFESLPAIIKQMSQLRF 708
                                  E+P  I  L  L +L + G +  E+LP  I  +S LR 
Sbjct: 825  ----------------------ELPSSIGNLQKLYMLRMCGCSKLETLPTNINLIS-LRI 861

Query: 709  IHLEDFNMLQSLPELPLCLKYLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLC 768
            ++L D + L+S PE+   +  L L +   ++ +P+       L +   +   SL E P  
Sbjct: 862  LNLTDCSQLKSFPEISTHISELRL-NGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPYA 920

Query: 769  LQYLN-----LEDCNMLRSLPELPLCLQLLTVRNCNRLQSLPEILLCLQELDASVLEKLS 823
            L  +       ED   +    +    L+ L + NCN L SLP       +L  S+    +
Sbjct: 921  LDIITDLLLVSEDIQEVPPRVKRMSRLRDLRLNNCNNLVSLP-------QLSNSLAYIYA 973

Query: 824  KHSPDLQWAPESLKSAAICFEFTNCLKLNGKANNKILADSLLRIRHMAIASLRLGYEMAI 883
             +   L+       +  I   F NC KLN +A + I+  S    R  A+           
Sbjct: 974  DNCKSLERLDCCFNNPEISLYFPNCFKLNQEARDLIMHTS---TRKCAM----------- 1019

Query: 884  NEKLSELRGSLIVLPGSEIPDWFSNQ-SSGSSICIQLPPHSSCRNLIGFAFCAVLDSKKV 942
                         LPG+++P  F+++ +SG S+ I+L   SS R  + F  C +L     
Sbjct: 1020 -------------LPGTQVPPCFNHRATSGDSLKIKL-KESSLRTTLRFKACIMLVKGNE 1065

Query: 943  DSDCFRYFYVSFQFDLEIK 961
            +    RY   S   D+ I+
Sbjct: 1066 E---MRYDRKSMSVDIVIR 1081


>gi|1842251|gb|AAB47618.1| rust resistance protein M [Linum usitatissimum]
          Length = 1305

 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 241/873 (27%), Positives = 393/873 (45%), Gaps = 152/873 (17%)

Query: 4    SDTVQIVGIWGMGGIGKTTLAKAIFDQFSHEFEGSCFVSDVRGNSETAGGLEHLQKQMLS 63
            S +V +VG++GMGGIGKTT AKA++++ S  F+  CFV +VR   E   G+  LQK+++S
Sbjct: 270  SKSVTMVGLYGMGGIGKTTTAKAVYNKISSHFDRCCFVDNVRAMQEQKDGIFILQKKLVS 329

Query: 64   TTLSEKLEVAG----PNIPHFTKERVRRMKLLIVLDDVNEVGQLKRLIGELDQFGQGSRI 119
              L  +++  G           KERV + K+L+VLDDV+E  + + ++G    F  G+R 
Sbjct: 330  EIL--RMDSVGFTNDSGGRKMIKERVSKSKILVVLDDVDEKFKFEDILGCPKDFDSGTRF 387

Query: 120  VVTTRDKRVLEKFRGEEKKIYRVNGLEFEEAFEHFCNFAFKENHCPEDLNWHSRSVVSYT 179
            ++T+R++ VL +    + K+Y V  +  + + E F   AFK+N  P D    +  +VS T
Sbjct: 388  IITSRNQNVLSRLNENQCKLYEVGSMSEQHSLELFSKHAFKKNTPPSDYETLANDIVSTT 447

Query: 180  KGNPLVLEVLGSSLCLKRKSHWGKVLHDLNRICESEIHDIYDILKISFNKLTPRVKSIFL 239
             G PL L+V GS L  +    W   L  L +    ++ ++YD LKIS++ L    K IFL
Sbjct: 448  GGLPLTLKVTGSFLFRQEIGVWEDTLEQLRKTL--DLDEVYDRLKISYDALKAEAKEIFL 505

Query: 240  DIACFFEGEDKDFVASILDD----SESDVLDILIDKSLVSISGN-FLNMHDILQEMGRQI 294
            DIACFF G +K+    +  +     +S+++  LI + ++ +  +  L MHD L++MGR+I
Sbjct: 506  DIACFFIGRNKEMPYYMWSECKFYPKSNII-FLIQRCMIQVGDDGVLEMHDQLRDMGREI 564

Query: 295  VRQESEKEPGKRSRLWDPKEISRVLKHNKGTDAIEGIFLDLSKI----KGINLDPRA--F 348
            VR+E  + P KRSR+W  +E   +L + KG+  ++ I +  + +     G+  + ++  F
Sbjct: 565  VRREDVQRPWKRSRIWSREEGIDLLLNKKGSSQVKAISIPNNMLYAWESGVKYEFKSECF 624

Query: 349  TNMSNLRLFKFYVPKFYEIEKLPSMSTEEQLSYSKVQLPNGLDYLPKKLRYLHWDTYP-- 406
             N+S LRLF                        S   L    + L   L++L    Y   
Sbjct: 625  LNLSELRLF---------------------FVGSTTLLTGDFNNLLPNLKWLDLPRYAHG 663

Query: 407  LRTLP-SNFKPKNLVELNLRCSKVEQPWEGEKACVPSSIQNFKYLSALSFKGCQSLRSFP 465
            L   P +NF  K LV L    SK E  W       P      K +   S  G        
Sbjct: 664  LYDPPVTNFTMKKLVILVSTNSKTE--WSHMIKMAP----RLKVVRLYSDYG-------- 709

Query: 466  SNLHFVCPVTINFSYCVNLIEFPQISGKVTRLYLGQSAIEEVPSSIECLTDLEVLDLRGC 525
                    V+   S+C     FP+     +   L  S IE     I  L +L+ LDL  C
Sbjct: 710  --------VSQRLSFC---WRFPK-----SIEVLSMSGIEIKEVDIGELKNLKTLDLTSC 753

Query: 526  KRLKRISTSFCKLRSLVTLIL--LGCLNLEHFPEILEKMEHLKRIYSDRT---------P 574
            +  K    +F  L+ L+ L L  + C NL      + ++  LK + ++            
Sbjct: 754  RIQKISGGTFGMLKGLIELRLDSIKCTNLREVVADIGQLSSLKVLKTEGAQEVQFEFPLA 813

Query: 575  ITELPSS-----FENLPGLEVLFVEDCSKLDNLP-----DNIGSLEY---------LY-- 613
            + EL +S        L  LEVL V  C+   ++P     ++ GS+ +         LY  
Sbjct: 814  LKELSTSSRIPNLSQLLDLEVLKVYGCNDGFDIPPAKSTEDEGSVWWKASKLKSLKLYRT 873

Query: 614  -----YILAAASAISQLPSSVALSNMLRSLDSSHCKGLESFPRTFLLGLSAMGLLHISDY 668
                  + A++     LPSS      L SL+   CK       T+L G+    L +++  
Sbjct: 874  RININVVDASSGGRYLLPSS------LTSLEIYWCK-----EPTWLPGIE--NLENLTSL 920

Query: 669  AVREIPQEIAYLSSLEILYLSGNNFESLPAIIKQMSQLRFIHLEDFNMLQSLPELPLCLK 728
             V ++          +I    G + + L   ++ +  L    +     ++ L +L LC  
Sbjct: 921  VVDDV----------DIFQTLGGDLDGLQG-LRSLETLTITEVNGLTRIKGLMDL-LCSS 968

Query: 729  YLHLIDCKMLQSLPVLPFCLESLDLTGCNMLRSLPELPLCLQYLNLEDC------NMLRS 782
                  CK L+ L +   C +  ++  C +      +P   + L + DC       M+RS
Sbjct: 969  T-----CK-LEKLEI-KACHDLTEILPCELHDQTVVVP-SFEKLTIRDCPRLEVGPMIRS 1020

Query: 783  LPELPLCLQL-LTVRNCNRLQSLPEILLCLQEL 814
            LP+ P+  +L L V N  + + L +++  LQEL
Sbjct: 1021 LPKFPMLKKLDLAVANITKEEDL-DVIGSLQEL 1052


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.138    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,622,419,528
Number of Sequences: 23463169
Number of extensions: 706998605
Number of successful extensions: 2057124
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7057
Number of HSP's successfully gapped in prelim test: 17582
Number of HSP's that attempted gapping in prelim test: 1840421
Number of HSP's gapped (non-prelim): 100998
length of query: 1083
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 930
effective length of database: 8,769,330,510
effective search space: 8155477374300
effective search space used: 8155477374300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 83 (36.6 bits)