Query 001410
Match_columns 1082
No_of_seqs 593 out of 4799
Neff 6.4
Searched_HMMs 29240
Date Tue Mar 26 15:50:24 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001410.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_713-717//hhsearch_pdb/001410hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 1.0 1 1 288.3 27.8 294 530-855 18-320 (437)
2 1n11_A Ankyrin; clathrin, BAND 1.0 1 1 287.1 26.1 294 530-855 84-386 (437)
3 4g8k_A 2-5A-dependent ribonucl 1.0 1 1 265.5 26.1 279 529-833 28-329 (337)
4 3utm_A Tankyrase-1; tankyrase, 1.0 1 1 253.8 25.6 281 529-831 27-335 (351)
5 1wdy_A 2-5A-dependent ribonucl 1.0 1 1 249.8 25.1 252 529-796 8-278 (285)
6 2fo1_E LIN-12 protein; beta-ba 1.0 1 1 247.9 18.3 244 531-794 99-369 (373)
7 3ljn_A Hypothetical protein; a 1.0 1 1 245.0 14.6 220 528-796 22-269 (364)
8 4g8k_A 2-5A-dependent ribonucl 1.0 1 1 241.4 24.8 244 530-796 63-326 (337)
9 2fo1_E LIN-12 protein; beta-ba 1.0 1 1 238.6 25.2 265 533-829 73-370 (373)
10 4b93_B Ankyrin repeat domain-c 1.0 1 1 237.6 14.5 212 528-783 13-230 (269)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=288.33 Aligned_cols=294 Identities=13% Similarity=0.124 Sum_probs=230.5
Q ss_pred CCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH---
Q ss_conf 42534049917899999879986568999999716999995699645435542002889997555788998036679---
Q 001410 530 CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL--- 606 (1082)
Q Consensus 530 ~~~ac~fG~veVv~~LLq~GvlrC~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l--- 606 (1082)
+++||.+|+++++..|++.|+. .+..+..|.||||+|+.+|+ .++++ |++..+++++..+..| .|+||+
T Consensus 18 L~~Aa~~g~~~~v~~Ll~~g~~--~~~~~~~~~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~A~~ 89 (437)
T 1n11_A 18 LHVASFMGHLPIVKNLLQRGAS--PNVSNVKVETPLHMAARAGH--TEVAK--YLLQNKAKVNAKAKDD--QTPLHCAAR 89 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC--SCCSSSCCCCHHHHHHHHTC--HHHHH--HHHHHTCCSSCCCTTS--CCHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHHHH
T ss_conf 9999987899999999986999--99888899879999998197--99999--9995899999879999--989999998
Q ss_pred --HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHH
Q ss_conf --899999998099998777636020999999961630678998876129987667574125999999998269999999
Q 001410 607 --HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRK 684 (1082)
Q Consensus 607 --~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~ 684 (1082)
+..++++|+..++..+..+..|.+++|+|+..++. +.+++|++.+.+.+..+..+ .++++.+...++..+++.
T Consensus 90 ~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~--~~v~~Ll~~~~~~~~~~~~g---~t~L~~A~~~g~~~~v~~ 164 (437)
T 1n11_A 90 IGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV--ETVLALLEKEASQACMTKKG---FTPLHVAAKYGKVRVAEL 164 (437)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCH--HHHHHHHHTTCCSCCCCTTS---CCHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCCC---CCHHHHHHHCCCHHHHHH
T ss_conf 7989999999967999887799998599999985999--99999996799876779999---879999997698999999
Q ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 99789999855799993999999829988899998679995303899997778999829999999999749999988899
Q 001410 685 VCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDP 764 (1082)
Q Consensus 685 Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp 764 (1082)
|++.|++++..+..|.||||+|+..|+.+++++|+..|++++..+..|+||||+|+..|+.+++++|+.+|++++.
T Consensus 165 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~---- 240 (437)
T 1n11_A 165 LLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA---- 240 (437)
T ss_dssp HHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC----
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC----
T ss_conf 9967999877789998889999981999999999847999887677899889999986989999999976999888----
Q ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99999999899999974979999999983897434457558898996999889----99999999822799999996310
Q 001410 765 SPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDESDV 840 (1082)
Q Consensus 765 ~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa----~~~v~~Lle~~a~~~a~~~~e~~ 840 (1082)
++..|.||||+|+..|+.+++++|++.+++ ++..+..|.||++.+. ..+++.|++.+++.+.
T Consensus 241 --~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------- 306 (437)
T 1n11_A 241 --ESVQGVTPLHLAAQEGHAEMVALLLSKQAN-----GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA------- 306 (437)
T ss_dssp --CCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC-------
T ss_pred --CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC-------
T ss_conf --798999799999977889999999966999-----998799999799999984999999999848756788-------
Q ss_pred CCCCCCHHHHHHHHH
Q ss_conf 001232126655664
Q 001410 841 LSLKDSLTAICNATQ 855 (1082)
Q Consensus 841 ~slkdsltal~~Aaq 855 (1082)
....+.||++.|+.
T Consensus 307 -~~~~g~t~L~~A~~ 320 (437)
T 1n11_A 307 -TTRMGYTPLHVASH 320 (437)
T ss_dssp -CCSSCCCHHHHHHH
T ss_pred -CCCCCCCHHHHHHH
T ss_conf -79999889999998
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=287.14 Aligned_cols=294 Identities=16% Similarity=0.141 Sum_probs=170.3
Q ss_pred CCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH---
Q ss_conf 42534049917899999879986568999999716999995699645435542002889997555788998036679---
Q 001410 530 CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL--- 606 (1082)
Q Consensus 530 ~~~ac~fG~veVv~~LLq~GvlrC~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l--- 606 (1082)
+++||..|+.+++..|++.|+. ....+..|.||||+|+.+++ .+++. +++..+++.+..+..| .+++|+
T Consensus 84 L~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~g~t~L~~A~~~g~--~~~v~--~Ll~~~~~~~~~~~~g--~t~L~~A~~ 155 (437)
T 1n11_A 84 LHCAARIGHTNMVKLLLENNAN--PNLATTAGHTPLHIAAREGH--VETVL--ALLEKEASQACMTKKG--FTPLHVAAK 155 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC--TTCCCTTCCCHHHHHHHHTC--HHHHH--HHHHTTCCSCCCCTTS--CCHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHHHH
T ss_conf 9999987989999999967999--88779999859999998599--99999--9996799876779999--879999997
Q ss_pred --HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHH
Q ss_conf --899999998099998777636020999999961630678998876129987667574125999999998269999999
Q 001410 607 --HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRK 684 (1082)
Q Consensus 607 --~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~ 684 (1082)
+.+++++|+..+...+..+..|.+++++++..++. +.+++|++.+.+.+..+..+ .++++.+...+...+++.
T Consensus 156 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~~~~~g---~t~L~~A~~~~~~~~~~~ 230 (437)
T 1n11_A 156 YGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNL--DIVKLLLPRGGSPHSPAWNG---YTPLHIAAKQNQVEVARS 230 (437)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCH--HHHHHHGGGTCCSCCCCTTC---CCHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCCC---CCHHHHHHHCCCHHHHHH
T ss_conf 6989999999967999877789998889999981999--99999984799988767789---988999998698999999
Q ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 99789999855799993999999829988899998679995303899997778999829999999999749999988899
Q 001410 685 VCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDP 764 (1082)
Q Consensus 685 Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp 764 (1082)
|++.|++++..+..|.||||+|+..|+.+++++|+..|++++.++..|+||||+|+..|+.+++++|+.+|++++.
T Consensus 231 Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~---- 306 (437)
T 1n11_A 231 LLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA---- 306 (437)
T ss_dssp HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC----
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC----
T ss_conf 9976999888798999799999977889999999966999998799999799999984999999999848756788----
Q ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99999999899999974979999999983897434457558898996999889----99999999822799999996310
Q 001410 765 SPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDESDV 840 (1082)
Q Consensus 765 ~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa----~~~v~~Lle~~a~~~a~~~~e~~ 840 (1082)
+|..|.||||+|+..|+.+++++|++.|+ +++.++..|.||++.+. .++++.|++.+++++.
T Consensus 307 --~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-----d~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~------- 372 (437)
T 1n11_A 307 --TTRMGYTPLHVASHYGNIKLVKFLLQHQA-----DVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE------- 372 (437)
T ss_dssp --CCSSCCCHHHHHHHSSCSHHHHHHHHTTC-----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC-------
T ss_pred --CCCCCCCHHHHHHHCCCHHHHHHHHHCCC-----CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCC-------
T ss_conf --79999889999998694999999996699-----9998899998899999987819999999977689988-------
Q ss_pred CCCCCCHHHHHHHHH
Q ss_conf 001232126655664
Q 001410 841 LSLKDSLTAICNATQ 855 (1082)
Q Consensus 841 ~slkdsltal~~Aaq 855 (1082)
..+++.||++.|..
T Consensus 373 -~~~~g~t~l~~A~~ 386 (437)
T 1n11_A 373 -VSSDGTTPLAIAKR 386 (437)
T ss_dssp -CCSSSCCHHHHHHH
T ss_pred -CCCCCCCHHHHHHH
T ss_conf -78998989999988
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=1.00 E-value=1 Score=265.51 Aligned_cols=279 Identities=13% Similarity=0.017 Sum_probs=237.1
Q ss_pred CCCHHHCCCCCHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH-
Q ss_conf 442534049917899999879986568999-999716999995699645435542002889997555788998036679-
Q 001410 529 KCKWSCMFAEVEVPAEVLADGVLCCRIPPH-AVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL- 606 (1082)
Q Consensus 529 ~~~~ac~fG~veVv~~LLq~GvlrC~~p~~-~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l- 606 (1082)
.+..||..|++++++.||+.|++ .+..+ ..|+||||+||.+|+ .++++ +++.++++++..+..+ .++++.
T Consensus 28 ~L~~Av~~g~~~~V~~LL~~Gad--vn~~~~~~g~TpLh~A~~~g~--~~iv~--~Ll~~ga~~~~~~~~~--~~~~~~~ 99 (337)
T 4g8k_A 28 LLIKAVQNEDVDLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSR--EDIVE--LLLRHGADPVLRKKNG--ATPFILA 99 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCC--TTCCCTTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCHHHHCCCC--CCHHHHH
T ss_conf 99999984899999999987999--783489899699999998498--99999--9987599533321578--8646777
Q ss_pred ----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCC-------CHHHHHHHHHHH
Q ss_conf ----899999998099998777636020999999961630678998876129987667574-------125999999998
Q 001410 607 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHV-------EKYQILQKIMKE 675 (1082)
Q Consensus 607 ----~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~-------~~~~~l~~~a~~ 675 (1082)
...+..+++..+...+..+..|.+++++++..+.. +.++++++.+++++...... ..+.++++.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~--~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~ 177 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV--KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 177 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCH--HHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHH
T ss_pred HHCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCCH--HHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 750541356776310200555303799879999871869--999999975998343330132200036789769999998
Q ss_pred HCHHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCCC----HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
Q ss_conf 269999999997-899998557999939999998299----888999986799953038999977789998299999999
Q 001410 676 KLYSWLLRKVCE-DGKGPCILDDEGQGVLHLAASLGY----DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAV 750 (1082)
Q Consensus 676 ~~~~~lv~~Ll~-~Gadin~~d~~G~TpLHlAa~~G~----~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~ 750 (1082)
.++..++++|++ .|++++.++..|.|+||.++..+. ..++++|+++|+++|.+|..|+||||+|+..|+.++++.
T Consensus 178 ~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~ 257 (337)
T 4g8k_A 178 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQR 257 (337)
T ss_dssp HTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 77899999998634989676578897278999997375668999999997799988768999987899998512589999
Q ss_pred HHH-CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHH
Q ss_conf 997-4999998889999999999899999974979999999983897434457558898996999889----99999999
Q 001410 751 LLS-LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVS 825 (1082)
Q Consensus 751 LL~-~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa----~~~v~~Ll 825 (1082)
|+. .|++++. +|..|+||||+|+..|+.+++++|+++|++ ++.+ +|++.+. .++++.|+
T Consensus 258 Ll~~~~~~vn~------~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd-----~n~~-----~~L~~A~~~~~~~iv~~Ll 321 (337)
T 4g8k_A 258 LLEQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRGAS-----TDCG-----DLVMTARRNYDHSLVKVLL 321 (337)
T ss_dssp HHTSTTCCTTC------BCTTSCBHHHHHHHTTCHHHHHHHHTTSCS-----STTC-----CHHHHHHHTTCHHHHHHHH
T ss_pred HHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCC-----CHHHHHHHCCCHHHHHHHH
T ss_conf 98734875667------689999999999986879999999987899-----9987-----8999999869999999999
Q ss_pred HHCCCCCC
Q ss_conf 82279999
Q 001410 826 EKTATPAN 833 (1082)
Q Consensus 826 e~~a~~~a 833 (1082)
++||+++.
T Consensus 322 ~~GA~~d~ 329 (337)
T 4g8k_A 322 SHGAKEDF 329 (337)
T ss_dssp HTTCCC--
T ss_pred HCCCCCCC
T ss_conf 87699898
No 4
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=1.00 E-value=1 Score=253.83 Aligned_cols=281 Identities=15% Similarity=0.030 Sum_probs=231.1
Q ss_pred CCCHHHCCCCCHHHHHHHHC-CCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH-
Q ss_conf 44253404991789999987-9986568999999716999995699645435542002889997555788998036679-
Q 001410 529 KCKWSCMFAEVEVPAEVLAD-GVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL- 606 (1082)
Q Consensus 529 ~~~~ac~fG~veVv~~LLq~-GvlrC~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l- 606 (1082)
.+.+||..|+.+++..++.. ++. ....+..|.||||+|+..|+ .++++ +++..+++++..+..| .++||+
T Consensus 27 ~L~~A~~~g~~~~v~~ll~~~~~~--~~~~d~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~A 98 (351)
T 3utm_A 27 ELLEAARSGNEEKLMALLTPLNVN--CHASDGRKSTPLHLAAGYNR--VRIVQ--LLLQHGADVHAKDKGG--LVPLHNA 98 (351)
T ss_dssp HHHHHHHHTCHHHHHHHCCTTTTT--CCCSSTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHH
T ss_conf 599999839989999999864888--65579999889999998599--99999--9997699997617999--8089999
Q ss_pred ----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCH-----------------
Q ss_conf ----89999999809999877763602099999996163067899887612998766757412-----------------
Q 001410 607 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEK----------------- 665 (1082)
Q Consensus 607 ----~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~----------------- 665 (1082)
+..++++|+..+...+..+..|.+++|+++..++. +.+++|++.+++.+..+..+..
T Consensus 99 ~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 176 (351)
T 3utm_A 99 CSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRV--EVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYE 176 (351)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH--HHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 977889999999977999997788899899999974999--999999976999863367898623777533258999864
Q ss_pred --HHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC---CHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf --599999999826999999999789999855799993999999829---988899998679995303899997778999
Q 001410 666 --YQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLG---YDWAIKPTVTAGVSINFRDLSGWTALHWAA 740 (1082)
Q Consensus 666 --~~~l~~~a~~~~~~~lv~~Ll~~Gadin~~d~~G~TpLHlAa~~G---~~~iv~~LL~~Gadin~~D~~G~TpLH~AA 740 (1082)
+..+...+..... ..+..++..+......+..|.||||+|+..+ ...++++|+..|++++.+|..|+||||+|+
T Consensus 177 ~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 255 (351)
T 3utm_A 177 FKGHSLLQAAREADL-AKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAA 255 (351)
T ss_dssp HHHHHHHHHHHTTCH-HHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred HCCCHHHHHHHHCCH-HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf 042179999983249-9999999700013357888998899999971755899999999759996776999998999999
Q ss_pred HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 82999999999974999998889999999999899999974979999999983897434457558898996999889999
Q 001410 741 YCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKA 820 (1082)
Q Consensus 741 ~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa~~~ 820 (1082)
..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|++.|++ ++..+..|.||++++...+
T Consensus 256 ~~g~~~~v~~Ll~~ga~~n~------~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad-----~~~~~~~g~tal~~a~~~~ 324 (351)
T 3utm_A 256 ERAHNDVMEVLHKHGAKMNA------LDSLGQTALHRAALAGHLQTCRLLLSYGSD-----PSIISLQGFTAAQMGNEAV 324 (351)
T ss_dssp HTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHSCHHH
T ss_pred HCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHHH
T ss_conf 85989899999987999877------599999889999982859999999984999-----8886889988365636999
Q ss_pred HHHHHHHCCCC
Q ss_conf 99999822799
Q 001410 821 VQTVSEKTATP 831 (1082)
Q Consensus 821 v~~Lle~~a~~ 831 (1082)
++.|.+.....
T Consensus 325 ~~~l~~~~~~~ 335 (351)
T 3utm_A 325 QQILSESTPMR 335 (351)
T ss_dssp HHHHHHC----
T ss_pred HHHHHHCCCCC
T ss_conf 99987606223
No 5
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=249.83 Aligned_cols=252 Identities=14% Similarity=0.031 Sum_probs=185.3
Q ss_pred CCCHHHCCCCCHHHHHHHHCCCCCCCCCC-CCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH-
Q ss_conf 44253404991789999987998656899-9999716999995699645435542002889997555788998036679-
Q 001410 529 KCKWSCMFAEVEVPAEVLADGVLCCRIPP-HAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL- 606 (1082)
Q Consensus 529 ~~~~ac~fG~veVv~~LLq~GvlrC~~p~-~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l- 606 (1082)
.+.+||..|+++++..|++.|+. .... +..|.||||+|+..++ .++++ +++..+++++..+..| .+++|+
T Consensus 8 ~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~A 79 (285)
T 1wdy_A 8 LLIKAVQNEDVDLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSR--EDIVE--LLLRHGADPVLRKKNG--ATPFLLA 79 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHH
T ss_conf 99999971899999999986998--432038999869999997697--99999--9997699975458789--9899999
Q ss_pred ----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC-------CCHHHHHHHHHHH
Q ss_conf ----89999999809999877763602099999996163067899887612998766757-------4125999999998
Q 001410 607 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQH-------VEKYQILQKIMKE 675 (1082)
Q Consensus 607 ----~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~-------~~~~~~l~~~a~~ 675 (1082)
+..++++|+..+...+..+..|.+++++++..+.. +.+++|++.+++.+..... ...+.++++.+..
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~--~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 157 (285)
T 1wdy_A 80 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV--KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCH--HHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred HHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCH--HHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHH
T ss_conf 974999999999975999876584568899999990988--999999984899441104478888660279869999998
Q ss_pred HCHHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCC----HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
Q ss_conf 2699999999978-99998557999939999998299----888999986799953038999977789998299999999
Q 001410 676 KLYSWLLRKVCED-GKGPCILDDEGQGVLHLAASLGY----DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAV 750 (1082)
Q Consensus 676 ~~~~~lv~~Ll~~-Gadin~~d~~G~TpLHlAa~~G~----~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~ 750 (1082)
.+...+++.|++. |++++..+..|.||||+|+..++ ..++++|++.|++++.+|..|+||||+|+..|+.+++++
T Consensus 158 ~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 237 (285)
T 1wdy_A 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQR 237 (285)
T ss_dssp HTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
T ss_conf 39899999999966999875488999878999981562338999999997699998868779868999998299999999
Q ss_pred HHH-CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf 997-4999998889999999999899999974979999999983897
Q 001410 751 LLS-LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT 796 (1082)
Q Consensus 751 LL~-~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~ 796 (1082)
|+. .|++++. +|..|.||||+|+..|+.+++++|+++|++
T Consensus 238 Ll~~~g~~~~~------~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~ 278 (285)
T 1wdy_A 238 LLEQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRGAS 278 (285)
T ss_dssp HHHSSSCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHSSC
T ss_pred HHHCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf 99636998545------089998399999983949999999975999
No 6
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=247.91 Aligned_cols=244 Identities=17% Similarity=0.088 Sum_probs=111.4
Q ss_pred CHHHCCCCCHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHHHCCCCCCCEEEEEE------CCCCCCCCCCCCCCCCCCCH
Q ss_conf 2534049917899999879986568999-9997169999956996454355420------02889997555788998036
Q 001410 531 KWSCMFAEVEVPAEVLADGVLCCRIPPH-AVGRVPFYITCSNRLACSEVREFDY------IVGSVKDADISDIYGSSTSE 603 (1082)
Q Consensus 531 ~~ac~fG~veVv~~LLq~GvlrC~~p~~-~~G~tPL~vA~~ng~~csevv~fey------l~~~~a~in~~d~~g~~~t~ 603 (1082)
++||.. +.+++..|+...+. ..+ ..|+||||+|+.+|+ .+++++++ ++..+++++..+..| .|+
T Consensus 99 ~~Aa~~-~~~~~~~L~~~~~n----~~d~~~g~t~Lh~Aa~~g~--~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g--~Tp 169 (373)
T 2fo1_E 99 HTEAAG-SYAITEPITRESVN----IIDPRHNRTVLHWIASNSS--AEKSEDLIVHEAKECIAAGADVNAMDCDE--NTP 169 (373)
T ss_dssp HHHHHS-SSCCCSCCSTTTTT----TCCCSSCCCHHHHHHCTTC--CSCCTTHHHHHHHHHHHTCCCTTCCCTTS--CCH
T ss_pred HHHHCC-CCHHHHHHCCCCCC----CCCCCCCCCHHHHHHHCCC--HHHHHHHHHHHHHHHHHCCCCCCCCCCCC--CCH
T ss_conf 998638-71688875002343----3577679888999987798--77899999999999986599876778999--898
Q ss_pred HHH-----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHC---CCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 679-----89999999809999877763602099999996163067899887612---9987667574125999999998
Q 001410 604 SFL-----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEA---NPEKNLSQHVEKYQILQKIMKE 675 (1082)
Q Consensus 604 L~l-----~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~g---ad~n~~s~~~~~~~~l~~~a~~ 675 (1082)
||+ +..++++|+..|+..+..+..|.+++|+|+..++. +.+++|++.+ .+++..+..+. ++++.+..
T Consensus 170 L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~--~~v~~Ll~~~~~~~~~~~~d~~g~---t~L~~A~~ 244 (373)
T 2fo1_E 170 LMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF--GMMVYMLNSTKLKGDIEELDRNGM---TALMIVAH 244 (373)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCH--HHHHHHTTSHHHHHTTSCCCTTSC---CHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH--HHHHHHHHCCCCCCCHHHCCCCCC---CHHHHHHH
T ss_conf 9999986949999999977999761589898799999877998--899999845765567322377899---79999998
Q ss_pred HC---HHHHHHHHHHCCCCCCC--------CCCCCCCHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCC
Q ss_conf 26---99999999978999985--------5799993999999829988899998679-995303899997778999829
Q 001410 676 KL---YSWLLRKVCEDGKGPCI--------LDDEGQGVLHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYCG 743 (1082)
Q Consensus 676 ~~---~~~lv~~Ll~~Gadin~--------~d~~G~TpLHlAa~~G~~~iv~~LL~~G-adin~~D~~G~TpLH~AA~~G 743 (1082)
.+ ...++++|++.|++++. .+..|.||||+|+..|+.+++++|+..| ++++.+|..|+||||+|+..|
T Consensus 245 ~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g 324 (373)
T 2fo1_E 245 NEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEG 324 (373)
T ss_dssp SCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHT
T ss_pred HCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 37834499999999779976555544457555458889999998099999999997368986676989998999999868
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
Q ss_conf 999999999749999988899999999998999999749799999999838
Q 001410 744 REKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESS 794 (1082)
Q Consensus 744 ~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g 794 (1082)
+.++|++|+.+|++++. +|..|.||||+|+.+|+.+++++|++.+
T Consensus 325 ~~~iv~~Ll~~gad~~~------~d~~g~t~l~~A~~~g~~~iv~~Ll~~~ 369 (373)
T 2fo1_E 325 RIEVVMYLIQQGASVEA------VDATDHTARQLAQANNHHNIVDIFDRCR 369 (373)
T ss_dssp CHHHHHHHHHTTCCSSC------CCSSSCCHHHHHHHTTCHHHHHHHHTTC
T ss_pred CHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCC
T ss_conf 99999999976998547------7989999999999859888999987337
No 7
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=1.00 E-value=1 Score=245.05 Aligned_cols=220 Identities=13% Similarity=0.096 Sum_probs=177.1
Q ss_pred CCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 34425340499178999998799865689999997169999956996454355420028899975557889980366798
Q 001410 528 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLH 607 (1082)
Q Consensus 528 ~~~~~ac~fG~veVv~~LLq~GvlrC~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l~ 607 (1082)
+.+++||..|+++++..|++.|+. .+..+..|.||||+||.+|+ .++++ +++..+++++. .
T Consensus 22 t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~--~----------- 82 (364)
T 3ljn_A 22 EKIHVAARKGQTDEVRRLIETGVS--PTIQNRFGCTALHLACKFGC--VDTAK--YLASVGEVHSL--W----------- 82 (364)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHCC--HHHHH--HHHHHCCCCCC--B-----------
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCC--C-----------
T ss_conf 799999980999999999986989--42248999969999998598--99999--99977997545--6-----------
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHH----CCCCCC-----------------CCCCCCHH
Q ss_conf 999999980999987776360209999999616306789988761----299876-----------------67574125
Q 001410 608 LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVE----ANPEKN-----------------LSQHVEKY 666 (1082)
Q Consensus 608 ~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~----gad~n~-----------------~s~~~~~~ 666 (1082)
.|.+++|+|+..++. +++++|++. +.+.+. .+. .+
T Consensus 83 -------------------~g~t~L~~A~~~g~~--~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g 138 (364)
T 3ljn_A 83 -------------------HGQKPIHLAVMANKT--DLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHC---KG 138 (364)
T ss_dssp -------------------TTBCHHHHHHHTTCH--HHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEE---SC
T ss_pred -------------------CCCCHHHHHHHCCCH--HHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHCCCCCCC---CC
T ss_conf -------------------899889999886998--899999971333587778898630267665403566798---89
Q ss_pred HHHHHHHHHHC--HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHH
Q ss_conf 99999999826--99999999978999985579999399999982998889999867999-----530389999777899
Q 001410 667 QILQKIMKEKL--YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVS-----INFRDLSGWTALHWA 739 (1082)
Q Consensus 667 ~~l~~~a~~~~--~~~lv~~Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gad-----in~~D~~G~TpLH~A 739 (1082)
.++++.+...+ +..+++.|++.|++++..|..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|
T Consensus 139 ~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A 218 (364)
T 3ljn_A 139 QTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWA 218 (364)
T ss_dssp CCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHH
T ss_pred CCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 87899999749966999999997699973628899989999998298999999986055412355523288998099999
Q ss_pred HHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf 982999999999974999998889999999999899999974979999999983897
Q 001410 740 AYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT 796 (1082)
Q Consensus 740 A~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~ 796 (1082)
+..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|++.|+.
T Consensus 219 ~~~g~~~~v~~Ll~~gad~~~------~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 269 (364)
T 3ljn_A 219 ILINWEDVAMRFVEMGIDVNM------EDNEHTVPLYLSVRAAMVLLTKELLQKTDV 269 (364)
T ss_dssp HTTTCHHHHHHHHTTTCCTTC------CCTTSCCHHHHHHHTCCHHHHHHHHHHSCH
T ss_pred HHCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHHCHHHHHHHHHHCCCC
T ss_conf 975988999999986999888------799999889999983829999999974880
No 8
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=1.00 E-value=1 Score=241.37 Aligned_cols=244 Identities=15% Similarity=0.108 Sum_probs=205.7
Q ss_pred CCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH---
Q ss_conf 42534049917899999879986568999999716999995699645435542002889997555788998036679---
Q 001410 530 CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL--- 606 (1082)
Q Consensus 530 ~~~ac~fG~veVv~~LLq~GvlrC~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l--- 606 (1082)
+++||..|+.+++..||+.|+. ....+..|.+|++.++..+. ..+.. ++...+++++..+..| .|++++
T Consensus 63 Lh~A~~~g~~~iv~~Ll~~ga~--~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~d~~g--~t~l~~A~~ 134 (337)
T 4g8k_A 63 LHNAVQMSREDIVELLLRHGAD--PVLRKKNGATPFILAAIAGS--VKLLK--LFLSKGADVNECDFYG--FTAFMEAAV 134 (337)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHTC--HHHHH--HHHTTTCCTTCBCTTC--CBHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCC--HHHHCCCCCCHHHHHHHCCC--CHHHH--HHHHCCCHHHHHCCCC--CCHHHHHHH
T ss_conf 9999984989999999875995--33321578864677775054--13567--7631020055530379--987999987
Q ss_pred --HHHHHHHHHHCCCCCC----------CCCCCCCCHHHHHHHHCCCCHHHHHHHHH-HCCCCCCCCCCCCHHHHHHHHH
Q ss_conf --8999999980999987----------77636020999999961630678998876-1299876675741259999999
Q 001410 607 --HLRLERILSMRSSPQN----------HLSEGLCEKQKLISKIIQLKEEEESYQMV-EANPEKNLSQHVEKYQILQKIM 673 (1082)
Q Consensus 607 --~~rivkLLl~~g~~~~----------~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~-~gad~n~~s~~~~~~~~l~~~a 673 (1082)
+..++++|+..++..+ .....|.+++|+|+..++. +++++|+. .+++++..+..+. +.++..+
T Consensus 135 ~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~--~~v~~LL~~~gad~n~~d~~g~--t~l~~~~ 210 (337)
T 4g8k_A 135 YGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV--EVLKILLDEMGADVNACDNMGR--NALIHAL 210 (337)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCH--HHHHHHHHHSCCCTTCCCTTSC--CHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCCCCC--CHHHHHH
T ss_conf 18699999999759983433301322000367897699999987789--9999998634989676578897--2789999
Q ss_pred H---HHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf 9---82699999999978999985579999399999982998889999867-9995303899997778999829999999
Q 001410 674 K---EKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCGREKTVA 749 (1082)
Q Consensus 674 ~---~~~~~~lv~~Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~-Gadin~~D~~G~TpLH~AA~~G~~eiV~ 749 (1082)
. ......++++|++.|++++.++..|.||||+|+..|+.++++.|+.. |+++|.+|..|+||||+|+..|+.++|+
T Consensus 211 ~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~ 290 (337)
T 4g8k_A 211 LSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAE 290 (337)
T ss_dssp HHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
T ss_conf 97375668999999997799988768999987899998512589999987348756676899999999999868799999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf 99974999998889999999999899999974979999999983897
Q 001410 750 VLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT 796 (1082)
Q Consensus 750 ~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~ 796 (1082)
+||++||+++. .+|||+|+.+|+.+++++|+++|++
T Consensus 291 ~Ll~~GAd~n~-----------~~~L~~A~~~~~~~iv~~Ll~~GA~ 326 (337)
T 4g8k_A 291 LLCKRGASTDC-----------GDLVMTARRNYDHSLVKVLLSHGAK 326 (337)
T ss_dssp HHHTTSCSSTT-----------CCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHCCCCCCC-----------CCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf 99987899998-----------7899999986999999999987699
No 9
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=238.57 Aligned_cols=265 Identities=14% Similarity=0.092 Sum_probs=212.1
Q ss_pred HHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC-CCCCCCCHHHHHH---
Q ss_conf 340499178999998799865689999997169999956996454355420028899975557-8899803667989---
Q 001410 533 SCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISD-IYGSSTSESFLHL--- 608 (1082)
Q Consensus 533 ac~fG~veVv~~LLq~GvlrC~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d-~~g~~~t~L~l~~--- 608 (1082)
+...|+.+++..++.. .++..|.||||+|+.++. +++. ++.. .+++..+ ..| .|+||+..
T Consensus 73 ~~~~g~~~~~~~~~~~-------~~~~~g~t~L~~Aa~~~~---~~~~--~L~~--~~~n~~d~~~g--~t~Lh~Aa~~g 136 (373)
T 2fo1_E 73 NDFLGDFNHTNLQIPT-------EPEPESPIKLHTEAAGSY---AITE--PITR--ESVNIIDPRHN--RTVLHWIASNS 136 (373)
T ss_dssp ----------------------------CCCHHHHHHHSSS---CCCS--CCST--TTTTTCCCSSC--CCHHHHHHCTT
T ss_pred CCCCCCCCCCCCCCCC-------CCCCCCCCHHHHHHCCCC---HHHH--HHCC--CCCCCCCCCCC--CCHHHHHHHCC
T ss_conf 7755556653122466-------789998657999863871---6888--7500--23433577679--88899998779
Q ss_pred ----------HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCH
Q ss_conf ----------9999998099998777636020999999961630678998876129987667574125999999998269
Q 001410 609 ----------RLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLY 678 (1082)
Q Consensus 609 ----------rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~ 678 (1082)
..++.|+..|+..+..+..|.+++|+|+..++. +++++|++.+++++..+..+. ++++.+...++
T Consensus 137 ~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~--~iv~~Ll~~ga~~~~~~~~g~---t~L~~A~~~g~ 211 (373)
T 2fo1_E 137 SAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRR--RLVAYLMKAGADPTIYNKSER---SALHQAAANRD 211 (373)
T ss_dssp CCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCH--HHHHHHHHTTCCSCCCCTTCC---CHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHH--HHHHHHHHCCCCCCCCCCCCC---CHHHHHHHCCC
T ss_conf 8778999999999999865998767789998989999986949--999999977999761589898---79999987799
Q ss_pred HHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHCC---CHHHHHHHHHCCCCCCC--------CCCCCCCHHHHHHHCCC
Q ss_conf 99999999789---999855799993999999829---98889999867999530--------38999977789998299
Q 001410 679 SWLLRKVCEDG---KGPCILDDEGQGVLHLAASLG---YDWAIKPTVTAGVSINF--------RDLSGWTALHWAAYCGR 744 (1082)
Q Consensus 679 ~~lv~~Ll~~G---adin~~d~~G~TpLHlAa~~G---~~~iv~~LL~~Gadin~--------~D~~G~TpLH~AA~~G~ 744 (1082)
..+++.|++.+ ++++..+..|.||||+|+..+ +.+++++|++.|++++. +|..|+||||+|+..|+
T Consensus 212 ~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~ 291 (373)
T 2fo1_E 212 FGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSN 291 (373)
T ss_dssp HHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCC
T ss_pred HHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
T ss_conf 88999998457655673223778997999999837834499999999779976555544457555458889999998099
Q ss_pred HHHHHHHHHCC-CCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH----H
Q ss_conf 99999999749-999988899999999998999999749799999999838974344575588989969998899----9
Q 001410 745 EKTVAVLLSLG-AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA----K 819 (1082)
Q Consensus 745 ~eiV~~LL~~G-Advna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa~----~ 819 (1082)
.++|++|+..| ++++. +|..|.||||+|+..|+.+++++|++.|++ ++.++..|.||++++.. +
T Consensus 292 ~~~v~~Ll~~~~~~~n~------~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad-----~~~~d~~g~t~l~~A~~~g~~~ 360 (373)
T 2fo1_E 292 MPIVKYLVGEKGSNKDK------QDEDGKTPIMLAAQEGRIEVVMYLIQQGAS-----VEAVDATDHTARQLAQANNHHN 360 (373)
T ss_dssp HHHHHHHHHHSCCCTTC------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----SSCCCSSSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHCCCHH
T ss_conf 99999999736898667------698999899999986899999999976998-----5477989999999999859888
Q ss_pred HHHHHHHHCC
Q ss_conf 9999998227
Q 001410 820 AVQTVSEKTA 829 (1082)
Q Consensus 820 ~v~~Lle~~a 829 (1082)
+++.|+++++
T Consensus 361 iv~~Ll~~~a 370 (373)
T 2fo1_E 361 IVDIFDRCRP 370 (373)
T ss_dssp HHHHHHTTC-
T ss_pred HHHHHHHCCC
T ss_conf 9999873373
No 10
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=237.58 Aligned_cols=212 Identities=16% Similarity=0.037 Sum_probs=137.8
Q ss_pred CCCCHHHCCCCCHHHHHHHHCCCCC------CCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 3442534049917899999879986------5689999997169999956996454355420028899975557889980
Q 001410 528 AKCKWSCMFAEVEVPAEVLADGVLC------CRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSST 601 (1082)
Q Consensus 528 ~~~~~ac~fG~veVv~~LLq~Gvlr------C~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~ 601 (1082)
+.+.+||..|+++++..||+.|... .....+..|.+||+.|+..+.. ..+ +.+++..|+++|..+.+|
T Consensus 13 ~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~-~~~--v~~Ll~~Gadvn~~d~~G--- 86 (269)
T 4b93_B 13 EKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPA-QKR--LAKVPASGLGVNVTSQDG--- 86 (269)
T ss_dssp HHHHHHHHTTCHHHHHHHHTCC-------------------------------------------CCCCTTCCCTTS---
T ss_pred HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCH-HHH--HHHHHHCCCCCCCCCCCC---
T ss_conf 49999998299999999997788421121122224586677899999984998-999--999998799988769999---
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHH
Q ss_conf 36679899999998099998777636020999999961630678998876129987667574125999999998269999
Q 001410 602 SESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWL 681 (1082)
Q Consensus 602 t~L~l~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~l 681 (1082)
.+++|+|+..+.. +.+++|+..+++.+..+..+. ++++.+...+...+
T Consensus 87 ---------------------------~TpLh~A~~~g~~--~~v~~Ll~~~a~~~~~~~~g~---t~l~~a~~~~~~~~ 134 (269)
T 4b93_B 87 ---------------------------SSPLHVAALHGRA--DLIPLLLKHGANAGARNADQA---VPLHLACQQGHFQV 134 (269)
T ss_dssp ---------------------------CCHHHHHHHTTCT--THHHHHHHTTCCTTCCCTTCC---CHHHHHHHHTCHHH
T ss_pred ---------------------------CCHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCCCC---CCCCCCCCCCHHHH
T ss_conf ---------------------------9999999984969--999999865998675578999---83300001272999
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC
Q ss_conf 99999789999855799993999999829988899998679995303899997778999829999999999749999988
Q 001410 682 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLL 761 (1082)
Q Consensus 682 v~~Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~ 761 (1082)
++.|++.|++++.+|..|+||||+||..|+.+++++|++.|+++|.+|..|+||||+||..|+.++|++|+++||++++
T Consensus 135 ~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~- 213 (269)
T 4b93_B 135 VKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV- 213 (269)
T ss_dssp HHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC-
T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC-
T ss_conf 9999987999887789999999999987899999999978799783214788389999986889999999987889988-
Q ss_pred CCCCCCCCCCCCHHHHHHHCCC
Q ss_conf 8999999999989999997497
Q 001410 762 TDPSPEFPLSRTPSDLASSNGH 783 (1082)
Q Consensus 762 tdp~~~D~~G~TPLhlAa~~Gh 783 (1082)
+|..|+||||+|+.+|+
T Consensus 214 -----~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 214 -----LNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp -----CCTTSCCSGGGSCTTCH
T ss_pred -----CCCCCCCHHHHHHHCCC
T ss_conf -----69999999999883784
Done!