Query 001411
Match_columns 1082
No_of_seqs 749 out of 4393
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 00:08:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001411.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001411hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 1E-197 3E-202 1771.0 116.6 1070 2-1074 148-1226(1228)
2 KOG0054 Multidrug resistance-a 100.0 2E-172 5E-177 1590.4 112.0 1035 7-1074 319-1376(1381)
3 PTZ00265 multidrug resistance 100.0 3E-159 6E-164 1549.0 133.5 1067 2-1073 174-1465(1466)
4 PLN03130 ABC transporter C fam 100.0 2E-155 5E-160 1526.8 128.9 1002 37-1075 452-1476(1622)
5 PLN03232 ABC transporter C fam 100.0 8E-154 2E-158 1514.8 126.5 999 41-1076 456-1474(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 1E-149 3E-154 1476.8 129.8 1011 29-1073 461-1520(1522)
7 PTZ00243 ABC transporter; Prov 100.0 5E-144 1E-148 1418.5 126.9 1033 10-1075 371-1548(1560)
8 TIGR01271 CFTR_protein cystic 100.0 6E-142 1E-146 1398.8 128.6 1021 14-1077 210-1456(1490)
9 KOG0058 Peptide exporter, ABC 100.0 7E-109 1E-113 948.0 66.9 576 497-1078 134-709 (716)
10 KOG0055 Multidrug/pheromone ex 100.0 1.7E-95 4E-100 882.6 56.3 578 497-1077 14-592 (1228)
11 COG2274 SunT ABC-type bacterio 100.0 1.1E-92 2.4E-97 852.4 71.0 517 551-1073 192-708 (709)
12 COG1132 MdlB ABC-type multidru 100.0 6.2E-87 1.3E-91 813.5 74.1 552 511-1075 15-566 (567)
13 KOG0058 Peptide exporter, ABC 100.0 6.9E-89 1.5E-93 782.8 49.8 440 2-444 265-706 (716)
14 PRK11174 cysteine/glutathione 100.0 1.2E-85 2.7E-90 807.0 75.1 566 499-1074 11-585 (588)
15 TIGR00958 3a01208 Conjugate Tr 100.0 3.6E-85 7.7E-90 813.3 73.4 564 497-1070 148-711 (711)
16 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.2E-83 2.5E-88 801.2 75.4 553 507-1073 133-685 (686)
17 COG4988 CydD ABC-type transpor 100.0 1.7E-83 3.7E-88 726.3 69.5 550 517-1075 7-557 (559)
18 TIGR01193 bacteriocin_ABC ABC- 100.0 2.9E-83 6.3E-88 800.4 73.3 561 500-1071 146-707 (708)
19 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 8.6E-83 1.9E-87 797.2 73.7 509 555-1070 196-709 (710)
20 PRK11160 cysteine/glutathione 100.0 2.2E-82 4.8E-87 771.5 74.7 564 501-1072 7-573 (574)
21 PRK10790 putative multidrug tr 100.0 9.7E-82 2.1E-86 772.4 75.0 564 501-1076 14-578 (592)
22 PRK11176 lipid transporter ATP 100.0 1.8E-81 3.8E-86 769.9 74.8 511 558-1075 70-581 (582)
23 TIGR03375 type_I_sec_LssB type 100.0 1.4E-81 3.1E-86 783.4 73.9 547 506-1061 143-689 (694)
24 KOG0056 Heavy metal exporter H 100.0 1.3E-84 2.7E-89 701.6 38.1 503 567-1075 273-776 (790)
25 KOG0057 Mitochondrial Fe/S clu 100.0 1.1E-81 2.3E-86 697.9 59.2 514 553-1075 74-588 (591)
26 TIGR01846 type_I_sec_HlyB type 100.0 1.2E-80 2.7E-85 774.2 75.8 557 507-1073 136-692 (694)
27 COG4987 CydC ABC-type transpor 100.0 2.7E-80 5.9E-85 686.6 63.8 503 561-1071 66-571 (573)
28 TIGR02203 MsbA_lipidA lipid A 100.0 1.3E-79 2.7E-84 752.9 74.6 562 502-1073 6-568 (571)
29 PRK13657 cyclic beta-1,2-gluca 100.0 7.3E-79 1.6E-83 745.8 75.9 565 498-1074 7-571 (588)
30 TIGR02204 MsbA_rel ABC transpo 100.0 1.1E-78 2.5E-83 744.7 74.6 563 505-1073 13-575 (576)
31 TIGR02868 CydC thiol reductant 100.0 3.9E-79 8.4E-84 740.1 69.1 517 506-1032 9-529 (529)
32 COG2274 SunT ABC-type bacterio 100.0 1.9E-80 4.2E-85 746.5 54.6 436 5-442 273-708 (709)
33 PTZ00265 multidrug resistance 100.0 8.3E-79 1.8E-83 794.2 73.2 570 496-1075 45-730 (1466)
34 TIGR01192 chvA glucan exporter 100.0 5.8E-78 1.3E-82 733.6 75.8 566 499-1076 8-573 (585)
35 PRK10789 putative multidrug tr 100.0 2.9E-78 6.2E-83 735.5 72.1 516 554-1076 37-553 (569)
36 COG5265 ATM1 ABC-type transpor 100.0 1.4E-79 3.1E-84 658.8 40.5 491 575-1071 4-496 (497)
37 TIGR02857 CydD thiol reductant 100.0 4.1E-76 8.9E-81 713.7 70.2 525 512-1044 5-529 (529)
38 COG1123 ATPase components of v 100.0 3.2E-78 6.8E-83 687.9 44.3 479 205-1072 5-531 (539)
39 TIGR01842 type_I_sec_PrtD type 100.0 2.5E-74 5.3E-79 698.7 72.6 532 513-1060 9-542 (544)
40 COG4988 CydD ABC-type transpor 100.0 5.4E-74 1.2E-78 649.1 53.8 438 3-443 118-556 (559)
41 PRK11174 cysteine/glutathione 100.0 5.9E-74 1.3E-78 703.7 56.4 434 5-443 143-585 (588)
42 PRK10261 glutathione transport 100.0 1.1E-74 2.5E-79 707.2 48.0 498 205-1072 12-566 (623)
43 PRK13549 xylose transporter AT 100.0 6.2E-75 1.3E-79 697.1 42.9 462 205-1059 5-493 (506)
44 PRK15134 microcin C ABC transp 100.0 2.1E-74 4.5E-79 696.4 45.3 465 205-1063 5-518 (529)
45 COG1132 MdlB ABC-type multidru 100.0 5.7E-73 1.2E-77 690.8 56.9 430 9-443 136-565 (567)
46 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 9.8E-73 2.1E-77 703.2 58.1 428 7-441 257-684 (686)
47 PRK09700 D-allose transporter 100.0 1.3E-73 2.8E-78 687.0 44.6 459 205-1057 5-495 (510)
48 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.7E-72 5.9E-77 702.5 56.6 434 4-439 272-709 (710)
49 TIGR00958 3a01208 Conjugate Tr 100.0 3.7E-72 8E-77 696.8 55.7 430 4-438 280-710 (711)
50 TIGR01194 cyc_pep_trnsptr cycl 100.0 8.2E-71 1.8E-75 667.5 66.0 533 498-1052 5-551 (555)
51 TIGR03269 met_CoM_red_A2 methy 100.0 1.8E-73 3.9E-78 687.4 42.0 453 206-1060 1-517 (520)
52 PRK10762 D-ribose transporter 100.0 5.4E-73 1.2E-77 679.5 44.9 454 205-1059 4-483 (501)
53 PRK11176 lipid transporter ATP 100.0 2E-71 4.3E-76 681.0 57.5 434 5-442 145-579 (582)
54 PRK11288 araG L-arabinose tran 100.0 4E-73 8.6E-78 680.7 40.9 457 205-1060 4-485 (501)
55 TIGR01193 bacteriocin_ABC ABC- 100.0 1.5E-71 3.3E-76 694.8 56.9 430 7-440 277-707 (708)
56 COG4172 ABC-type uncharacteriz 100.0 2.1E-72 4.5E-77 598.3 41.2 471 205-1070 6-526 (534)
57 PRK15439 autoinducer 2 ABC tra 100.0 1.9E-72 4.1E-77 674.9 46.0 463 205-1060 11-492 (510)
58 COG4618 ArpD ABC-type protease 100.0 6.3E-71 1.4E-75 605.4 52.6 496 555-1061 65-561 (580)
59 TIGR03375 type_I_sec_LssB type 100.0 2.5E-71 5.5E-76 691.4 56.4 424 6-431 266-689 (694)
60 TIGR02633 xylG D-xylose ABC tr 100.0 2.5E-72 5.3E-77 674.9 45.5 460 206-1058 2-490 (500)
61 KOG0056 Heavy metal exporter H 100.0 2.9E-73 6.2E-78 613.7 33.1 422 22-446 356-778 (790)
62 PRK11160 cysteine/glutathione 100.0 4.9E-71 1.1E-75 672.1 56.6 432 4-440 139-572 (574)
63 PRK10982 galactose/methyl gala 100.0 1.2E-71 2.7E-76 666.7 43.9 454 208-1059 1-479 (491)
64 TIGR01257 rim_protein retinal- 100.0 3E-68 6.5E-73 689.5 78.1 220 204-431 927-1150(2272)
65 PRK10938 putative molybdenum t 100.0 2.8E-71 6.1E-76 664.0 43.0 452 206-1053 4-485 (490)
66 TIGR01846 type_I_sec_HlyB type 100.0 1.4E-69 3.1E-74 675.0 58.2 431 9-442 262-692 (694)
67 TIGR02203 MsbA_lipidA lipid A 100.0 1.4E-69 2.9E-74 664.2 57.2 435 4-442 133-568 (571)
68 KOG0057 Mitochondrial Fe/S clu 100.0 3.3E-70 7.1E-75 606.4 46.3 411 27-443 177-587 (591)
69 PRK10790 putative multidrug tr 100.0 4.4E-69 9.6E-74 660.5 57.0 431 5-443 145-576 (592)
70 PRK15064 ABC transporter ATP-b 100.0 1.5E-69 3.2E-74 654.2 51.7 479 206-1060 2-525 (530)
71 PRK10789 putative multidrug tr 100.0 7.5E-69 1.6E-73 652.9 57.9 429 11-443 122-551 (569)
72 PRK13657 cyclic beta-1,2-gluca 100.0 8.1E-69 1.8E-73 657.1 57.9 430 10-442 141-570 (588)
73 TIGR00956 3a01205 Pleiotropic 100.0 3.7E-69 8.1E-74 703.6 57.6 213 834-1057 759-990 (1394)
74 COG4987 CydC ABC-type transpor 100.0 1.4E-68 3.1E-73 593.2 48.2 414 22-440 155-571 (573)
75 TIGR02204 MsbA_rel ABC transpo 100.0 5.3E-68 1.2E-72 650.4 57.1 436 6-442 139-575 (576)
76 TIGR02868 CydC thiol reductant 100.0 2.1E-68 4.6E-73 646.3 52.6 396 5-402 133-529 (529)
77 TIGR01192 chvA glucan exporter 100.0 1.9E-67 4.2E-72 641.2 58.2 433 7-442 138-570 (585)
78 COG5265 ATM1 ABC-type transpor 100.0 6.1E-69 1.3E-73 576.9 38.2 421 18-440 76-496 (497)
79 PRK11819 putative ABC transpor 100.0 6.3E-68 1.4E-72 641.7 50.5 482 205-1061 6-534 (556)
80 PLN03232 ABC transporter C fam 100.0 6E-66 1.3E-70 680.9 71.8 472 578-1074 366-841 (1495)
81 TIGR01842 type_I_sec_PrtD type 100.0 5.5E-67 1.2E-71 634.5 56.0 410 16-430 132-542 (544)
82 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 2.3E-67 5E-72 636.9 52.6 480 205-1060 4-531 (552)
83 PLN03130 ABC transporter C fam 100.0 1.5E-65 3.3E-70 676.0 73.2 471 578-1074 366-841 (1622)
84 COG4618 ArpD ABC-type protease 100.0 9E-68 1.9E-72 580.6 42.1 410 17-431 151-561 (580)
85 PRK10522 multidrug transporter 100.0 1.3E-65 2.8E-70 622.2 65.5 472 566-1059 61-538 (547)
86 TIGR02857 CydD thiol reductant 100.0 5.2E-66 1.1E-70 625.4 53.4 406 5-414 124-529 (529)
87 PRK10636 putative ABC transpor 100.0 4.2E-66 9.1E-71 631.7 49.5 201 834-1060 312-517 (638)
88 TIGR00957 MRP_assoc_pro multi 100.0 3.3E-65 7.1E-70 674.8 57.2 432 5-441 1085-1519(1522)
89 PLN03140 ABC transporter G fam 100.0 5.3E-64 1.1E-68 651.4 62.9 213 834-1056 867-1106(1470)
90 PRK11147 ABC transporter ATPas 100.0 1.3E-64 2.7E-69 620.8 50.3 201 834-1060 319-528 (635)
91 PTZ00243 ABC transporter; Prov 100.0 3.5E-64 7.5E-69 662.6 57.4 437 5-442 1078-1546(1560)
92 PLN03073 ABC transporter F fam 100.0 1.2E-64 2.7E-69 618.7 45.8 201 833-1059 507-713 (718)
93 COG1129 MglA ABC-type sugar tr 100.0 2.6E-64 5.5E-69 570.7 41.9 456 205-1056 8-486 (500)
94 TIGR00954 3a01203 Peroxysomal 100.0 2.7E-61 5.9E-66 591.5 63.3 529 498-1046 79-653 (659)
95 PRK13409 putative ATPase RIL; 100.0 7.4E-64 1.6E-68 602.2 36.7 437 209-1054 77-536 (590)
96 COG0488 Uup ATPase components 100.0 2.3E-62 4.9E-67 572.0 46.7 485 205-1061 3-526 (530)
97 COG3845 ABC-type uncharacteriz 100.0 1.1E-61 2.3E-66 535.5 39.9 457 205-1057 4-489 (501)
98 TIGR01271 CFTR_protein cystic 100.0 1.4E-60 3E-65 628.7 56.9 433 5-444 1005-1454(1490)
99 TIGR01194 cyc_pep_trnsptr cycl 100.0 6.6E-60 1.4E-64 572.2 51.4 407 5-422 132-551 (555)
100 KOG0054 Multidrug resistance-a 100.0 7E-56 1.5E-60 551.6 63.8 494 558-1072 247-742 (1381)
101 PRK10522 multidrug transporter 100.0 9.9E-56 2.1E-60 536.0 51.5 400 4-422 126-530 (547)
102 TIGR00954 3a01203 Peroxysomal 100.0 1.3E-52 2.8E-57 514.8 49.5 396 4-415 217-652 (659)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.1E-54 2.4E-59 475.5 27.2 238 833-1074 1-238 (275)
104 COG1126 GlnQ ABC-type polar am 100.0 1.5E-51 3.3E-56 408.9 20.4 215 205-432 2-227 (240)
105 COG1126 GlnQ ABC-type polar am 100.0 4E-51 8.6E-56 405.9 21.0 217 834-1064 2-229 (240)
106 PRK14257 phosphate ABC transpo 100.0 1.3E-49 2.8E-54 446.9 26.0 227 829-1063 75-316 (329)
107 KOG0927 Predicted transporter 100.0 1.4E-49 2.9E-54 439.9 24.6 199 834-1057 389-593 (614)
108 COG1135 AbcC ABC-type metal io 100.0 2.9E-49 6.2E-54 412.7 21.3 226 835-1071 2-243 (339)
109 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.3E-48 2.9E-53 427.5 26.5 236 204-441 1-236 (275)
110 COG1125 OpuBA ABC-type proline 100.0 3.4E-49 7.4E-54 399.0 17.4 214 206-432 2-227 (309)
111 COG1117 PstB ABC-type phosphat 100.0 6.6E-49 1.4E-53 387.5 18.3 220 834-1063 7-240 (253)
112 COG1125 OpuBA ABC-type proline 100.0 1.1E-48 2.4E-53 395.4 19.0 219 835-1068 2-233 (309)
113 COG1135 AbcC ABC-type metal io 100.0 1.3E-48 2.9E-53 407.7 19.1 216 206-432 2-233 (339)
114 COG1117 PstB ABC-type phosphat 100.0 1.5E-48 3.3E-53 385.0 17.4 220 204-432 6-239 (253)
115 cd03288 ABCC_SUR2 The SUR doma 100.0 5.4E-47 1.2E-51 414.9 28.4 240 831-1072 16-255 (257)
116 cd03252 ABCC_Hemolysin The ABC 100.0 5.1E-47 1.1E-51 411.1 27.3 235 835-1071 1-235 (237)
117 KOG0065 Pleiotropic drug resis 100.0 1.4E-45 2.9E-50 447.0 35.2 198 850-1057 804-1018(1391)
118 PRK14257 phosphate ABC transpo 100.0 2.4E-46 5.1E-51 420.5 25.0 222 203-431 78-314 (329)
119 cd03252 ABCC_Hemolysin The ABC 100.0 4.8E-46 1E-50 403.5 26.4 234 206-439 1-234 (237)
120 cd03253 ABCC_ATM1_transporter 100.0 1.4E-45 3E-50 399.9 26.9 235 835-1072 1-235 (236)
121 COG1120 FepC ABC-type cobalami 100.0 4E-46 8.7E-51 392.1 20.6 214 205-431 2-229 (258)
122 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.1E-45 4.6E-50 398.7 26.8 236 835-1071 1-236 (238)
123 cd03251 ABCC_MsbA MsbA is an e 100.0 1.8E-45 4E-50 398.3 26.1 233 835-1069 1-233 (234)
124 cd03244 ABCC_MRP_domain2 Domai 100.0 2E-45 4.4E-50 394.3 26.1 221 833-1055 1-221 (221)
125 COG1127 Ttg2A ABC-type transpo 100.0 7.4E-46 1.6E-50 374.2 20.4 219 204-435 7-240 (263)
126 cd03254 ABCC_Glucan_exporter_l 100.0 2.9E-45 6.4E-50 395.4 26.4 227 833-1061 1-227 (229)
127 COG3839 MalK ABC-type sugar tr 100.0 1.1E-45 2.3E-50 403.9 21.5 213 205-432 3-225 (338)
128 COG3840 ThiQ ABC-type thiamine 100.0 1.1E-45 2.5E-50 354.5 18.9 210 206-432 2-221 (231)
129 COG2884 FtsE Predicted ATPase 100.0 5.9E-46 1.3E-50 360.0 17.1 207 206-424 2-220 (223)
130 COG1124 DppF ABC-type dipeptid 100.0 1.9E-45 4.1E-50 373.9 21.2 227 834-1071 3-242 (252)
131 COG1116 TauB ABC-type nitrate/ 100.0 1.4E-45 3.1E-50 379.2 20.0 195 205-417 3-207 (248)
132 KOG0062 ATPase component of AB 100.0 4.7E-45 1E-49 401.8 25.1 194 833-1051 361-559 (582)
133 TIGR02314 ABC_MetN D-methionin 100.0 2.8E-45 6E-50 412.0 23.9 226 835-1071 2-242 (343)
134 COG1120 FepC ABC-type cobalami 100.0 2.2E-45 4.7E-50 386.6 21.2 213 834-1060 2-228 (258)
135 cd03251 ABCC_MsbA MsbA is an e 100.0 8.2E-45 1.8E-49 393.2 25.8 231 206-436 1-231 (234)
136 COG1136 SalX ABC-type antimicr 100.0 6.5E-45 1.4E-49 375.5 23.5 205 206-420 2-221 (226)
137 COG3839 MalK ABC-type sugar tr 100.0 3.5E-45 7.6E-50 399.8 22.6 219 834-1068 3-231 (338)
138 COG1127 Ttg2A ABC-type transpo 100.0 5.9E-45 1.3E-49 367.7 21.9 226 834-1073 8-248 (263)
139 cd03288 ABCC_SUR2 The SUR doma 100.0 1.7E-44 3.7E-49 395.2 27.5 238 202-440 16-254 (257)
140 cd03254 ABCC_Glucan_exporter_l 100.0 1.7E-44 3.8E-49 389.3 25.9 226 205-431 2-227 (229)
141 COG3842 PotA ABC-type spermidi 100.0 1.6E-45 3.4E-50 404.7 17.9 214 204-432 4-228 (352)
142 cd03253 ABCC_ATM1_transporter 100.0 2.4E-44 5.2E-49 390.1 26.4 233 206-439 1-233 (236)
143 cd03245 ABCC_bacteriocin_expor 100.0 2.5E-44 5.4E-49 385.7 26.1 220 833-1053 1-220 (220)
144 COG3638 ABC-type phosphate/pho 100.0 6E-45 1.3E-49 366.6 18.8 214 205-430 3-237 (258)
145 COG2884 FtsE Predicted ATPase 100.0 4.8E-45 1.1E-49 353.7 17.4 208 835-1055 2-221 (223)
146 COG3840 ThiQ ABC-type thiamine 100.0 1.5E-44 3.3E-49 346.8 19.9 210 835-1062 2-221 (231)
147 cd03244 ABCC_MRP_domain2 Domai 100.0 4.5E-44 9.8E-49 383.9 25.9 219 205-424 2-220 (221)
148 COG1122 CbiO ABC-type cobalt t 100.0 1.7E-44 3.7E-49 381.2 22.0 215 834-1061 3-229 (235)
149 COG1122 CbiO ABC-type cobalt t 100.0 1E-44 2.2E-49 382.8 20.3 215 205-431 3-229 (235)
150 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.6E-44 5.6E-49 376.1 23.0 209 834-1060 4-227 (254)
151 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 4.9E-44 1.1E-48 388.0 26.1 232 206-437 1-233 (238)
152 PRK13631 cbiO cobalt transport 100.0 6.1E-44 1.3E-48 399.9 26.7 220 834-1060 21-265 (320)
153 COG3638 ABC-type phosphate/pho 100.0 2E-44 4.4E-49 362.9 20.0 222 834-1071 3-245 (258)
154 cd03248 ABCC_TAP TAP, the Tran 100.0 5E-44 1.1E-48 384.8 24.3 219 831-1049 8-226 (226)
155 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3.4E-44 7.5E-49 375.1 21.9 210 205-431 4-228 (254)
156 COG1124 DppF ABC-type dipeptid 100.0 2.6E-44 5.7E-49 365.5 20.4 222 205-437 3-239 (252)
157 cd03261 ABC_Org_Solvent_Resist 100.0 3.9E-44 8.5E-49 387.8 22.8 212 835-1060 1-226 (235)
158 cd03245 ABCC_bacteriocin_expor 100.0 1.1E-43 2.3E-48 380.7 25.9 219 205-423 2-220 (220)
159 cd03260 ABC_PstB_phosphate_tra 100.0 3E-44 6.5E-49 386.8 21.1 212 835-1058 1-227 (227)
160 COG1136 SalX ABC-type antimicr 100.0 1.1E-43 2.4E-48 366.3 23.4 207 835-1051 2-222 (226)
161 PRK14269 phosphate ABC transpo 100.0 1.1E-43 2.5E-48 386.5 24.4 219 834-1062 2-232 (246)
162 COG4178 ABC-type uncharacteriz 100.0 3.3E-40 7.2E-45 381.3 53.5 474 554-1045 87-587 (604)
163 TIGR02314 ABC_MetN D-methionin 100.0 7.3E-44 1.6E-48 400.5 22.2 215 206-431 2-231 (343)
164 PRK14250 phosphate ABC transpo 100.0 2.1E-43 4.5E-48 383.1 25.0 225 834-1071 3-232 (241)
165 cd03369 ABCC_NFT1 Domain 2 of 100.0 2.4E-43 5.2E-48 374.0 25.0 207 829-1055 1-207 (207)
166 COG1118 CysA ABC-type sulfate/ 100.0 3.1E-44 6.7E-49 373.7 17.5 215 205-432 2-229 (345)
167 COG3842 PotA ABC-type spermidi 100.0 3.9E-44 8.5E-49 393.7 19.2 221 833-1069 4-235 (352)
168 PRK11432 fbpC ferric transport 100.0 1.2E-43 2.6E-48 401.1 23.2 218 834-1067 6-233 (351)
169 PRK11650 ugpC glycerol-3-phosp 100.0 1.7E-43 3.6E-48 401.2 24.4 219 834-1067 3-231 (356)
170 PRK13650 cbiO cobalt transport 100.0 1.9E-43 4E-48 391.0 24.0 217 834-1061 4-230 (279)
171 COG1116 TauB ABC-type nitrate/ 100.0 1.3E-43 2.9E-48 364.8 20.8 197 834-1049 3-211 (248)
172 COG4615 PvdE ABC-type sideroph 100.0 2E-40 4.3E-45 352.5 45.4 476 555-1052 50-529 (546)
173 PRK11153 metN DL-methionine tr 100.0 2.9E-43 6.3E-48 399.2 24.2 222 835-1067 2-237 (343)
174 TIGR03265 PhnT2 putative 2-ami 100.0 2.9E-43 6.2E-48 398.9 23.4 218 834-1067 4-231 (353)
175 PRK14273 phosphate ABC transpo 100.0 6.3E-43 1.4E-47 382.8 24.6 224 834-1067 7-245 (254)
176 PRK13647 cbiO cobalt transport 100.0 5.3E-43 1.2E-47 386.3 24.1 213 834-1059 4-226 (274)
177 TIGR01186 proV glycine betaine 100.0 3.1E-43 6.6E-48 397.4 22.5 208 849-1067 5-226 (363)
178 cd03261 ABC_Org_Solvent_Resist 100.0 3.2E-43 6.9E-48 380.7 21.7 214 206-432 1-228 (235)
179 PRK10744 pstB phosphate transp 100.0 8.7E-43 1.9E-47 382.6 25.4 222 832-1063 11-247 (260)
180 TIGR00972 3a0107s01c2 phosphat 100.0 7.2E-43 1.6E-47 380.7 24.4 222 835-1066 2-238 (247)
181 PRK13637 cbiO cobalt transport 100.0 5.2E-43 1.1E-47 388.7 23.6 217 835-1060 3-234 (287)
182 cd03219 ABC_Mj1267_LivG_branch 100.0 5E-43 1.1E-47 379.8 22.2 216 835-1060 1-232 (236)
183 cd03296 ABC_CysA_sulfate_impor 100.0 9.6E-43 2.1E-47 377.8 24.4 212 835-1062 3-228 (239)
184 PRK14242 phosphate transporter 100.0 8.1E-43 1.8E-47 381.9 23.8 220 834-1063 6-240 (253)
185 PRK13631 cbiO cobalt transport 100.0 8.4E-43 1.8E-47 390.7 24.1 221 204-431 20-266 (320)
186 cd03256 ABC_PhnC_transporter A 100.0 7.6E-43 1.6E-47 379.8 22.9 213 835-1060 1-234 (241)
187 cd03248 ABCC_TAP TAP, the Tran 100.0 1.1E-42 2.3E-47 374.5 23.7 218 202-419 8-226 (226)
188 PRK09536 btuD corrinoid ABC tr 100.0 9.7E-43 2.1E-47 397.9 24.7 221 834-1070 3-236 (402)
189 PRK10851 sulfate/thiosulfate t 100.0 9.2E-43 2E-47 394.8 24.1 217 834-1066 2-232 (353)
190 PRK13635 cbiO cobalt transport 100.0 1.2E-42 2.5E-47 384.2 24.0 215 834-1060 5-229 (279)
191 PRK09452 potA putrescine/sperm 100.0 1.4E-42 3.1E-47 394.8 25.2 217 834-1066 14-240 (375)
192 cd03263 ABC_subfamily_A The AB 100.0 7.6E-43 1.6E-47 374.2 21.7 211 835-1058 1-219 (220)
193 PRK13643 cbiO cobalt transport 100.0 1.2E-42 2.7E-47 385.9 24.0 216 835-1060 2-233 (288)
194 PRK13646 cbiO cobalt transport 100.0 8.9E-43 1.9E-47 386.9 22.8 220 835-1061 3-236 (286)
195 cd03258 ABC_MetN_methionine_tr 100.0 1.1E-42 2.4E-47 376.2 22.7 215 835-1060 2-230 (233)
196 TIGR03258 PhnT 2-aminoethylpho 100.0 1E-42 2.2E-47 394.7 23.3 218 833-1066 4-234 (362)
197 cd03224 ABC_TM1139_LivF_branch 100.0 1.2E-42 2.7E-47 373.2 22.7 217 835-1060 1-221 (222)
198 PRK14267 phosphate ABC transpo 100.0 1.2E-42 2.6E-47 380.6 23.1 225 834-1068 4-245 (253)
199 TIGR02315 ABC_phnC phosphonate 100.0 1.4E-42 2.9E-47 378.1 23.2 212 835-1059 2-234 (243)
200 PRK11650 ugpC glycerol-3-phosp 100.0 1.1E-42 2.4E-47 394.5 23.4 213 205-431 3-225 (356)
201 PRK14235 phosphate transporter 100.0 1.7E-42 3.7E-47 381.4 24.1 223 831-1063 16-254 (267)
202 cd03260 ABC_PstB_phosphate_tra 100.0 9.5E-43 2.1E-47 375.1 21.6 212 206-428 1-227 (227)
203 PRK13642 cbiO cobalt transport 100.0 2.2E-42 4.7E-47 382.3 25.0 216 834-1060 4-229 (277)
204 TIGR00960 3a0501s02 Type II (G 100.0 6.4E-43 1.4E-47 373.5 19.9 203 835-1049 2-216 (216)
205 PRK13636 cbiO cobalt transport 100.0 1.7E-42 3.7E-47 384.1 23.9 214 834-1060 5-231 (283)
206 cd03259 ABC_Carb_Solutes_like 100.0 7.1E-43 1.5E-47 372.3 19.9 203 835-1053 1-213 (213)
207 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.3E-42 2.8E-47 382.4 22.5 219 836-1068 26-258 (269)
208 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.5E-42 3.2E-47 377.1 22.6 218 835-1063 1-228 (242)
209 PRK14247 phosphate ABC transpo 100.0 1.7E-42 3.7E-47 378.7 22.9 226 834-1069 3-243 (250)
210 PRK14259 phosphate ABC transpo 100.0 3E-42 6.5E-47 379.5 25.0 221 833-1063 12-256 (269)
211 PRK11432 fbpC ferric transport 100.0 1.3E-42 2.7E-47 392.8 22.4 212 205-431 6-227 (351)
212 cd03291 ABCC_CFTR1 The CFTR su 100.0 9.4E-42 2E-46 374.9 28.4 220 831-1070 36-256 (282)
213 PRK11000 maltose/maltodextrin 100.0 2.2E-42 4.7E-47 395.1 24.2 217 834-1066 3-229 (369)
214 PRK15079 oligopeptide ABC tran 100.0 3.2E-42 6.9E-47 387.4 24.4 228 834-1071 8-263 (331)
215 PRK13634 cbiO cobalt transport 100.0 2E-42 4.3E-47 384.6 22.4 216 835-1060 3-235 (290)
216 PRK13650 cbiO cobalt transport 100.0 2.8E-42 6.1E-47 381.6 23.4 216 205-431 4-230 (279)
217 TIGR03005 ectoine_ehuA ectoine 100.0 3.1E-42 6.7E-47 376.9 23.5 218 835-1066 1-242 (252)
218 PRK14237 phosphate transporter 100.0 3.9E-42 8.5E-47 378.5 24.1 220 833-1062 19-253 (267)
219 PRK11831 putative ABC transpor 100.0 3.2E-42 7E-47 379.6 23.5 224 834-1071 7-244 (269)
220 PRK13651 cobalt transporter AT 100.0 3.2E-42 6.9E-47 383.9 23.6 216 835-1061 3-255 (305)
221 PRK14244 phosphate ABC transpo 100.0 1.8E-42 3.8E-47 378.6 21.0 222 835-1066 6-243 (251)
222 TIGR01186 proV glycine betaine 100.0 1.2E-42 2.5E-47 392.6 20.1 200 221-431 7-220 (363)
223 PRK13652 cbiO cobalt transport 100.0 4.1E-42 8.9E-47 380.1 24.0 213 835-1060 4-227 (277)
224 PRK14251 phosphate ABC transpo 100.0 2.9E-42 6.4E-47 377.1 22.5 224 834-1067 4-242 (251)
225 TIGR03265 PhnT2 putative 2-ami 100.0 1.8E-42 3.8E-47 392.4 21.4 212 205-431 4-225 (353)
226 cd03250 ABCC_MRP_domain1 Domai 100.0 5E-42 1.1E-46 363.0 23.5 200 835-1048 1-204 (204)
227 PRK14248 phosphate ABC transpo 100.0 4.4E-42 9.6E-47 378.8 24.0 219 834-1062 21-254 (268)
228 PRK14268 phosphate ABC transpo 100.0 3.6E-42 7.9E-47 377.3 23.2 223 834-1066 12-248 (258)
229 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.1E-42 1.1E-46 371.4 24.1 216 835-1061 2-222 (236)
230 cd03264 ABC_drug_resistance_li 100.0 3E-42 6.4E-47 366.9 21.8 203 835-1053 1-211 (211)
231 PRK11629 lolD lipoprotein tran 100.0 4E-42 8.6E-47 371.5 22.8 210 834-1054 5-228 (233)
232 cd03265 ABC_DrrA DrrA is the A 100.0 3.5E-42 7.7E-47 368.7 22.3 209 835-1058 1-219 (220)
233 PRK14274 phosphate ABC transpo 100.0 5.9E-42 1.3E-46 376.1 24.5 222 834-1065 12-248 (259)
234 PRK14236 phosphate transporter 100.0 5.9E-42 1.3E-46 378.2 24.5 221 832-1062 23-258 (272)
235 PRK13632 cbiO cobalt transport 100.0 5.1E-42 1.1E-46 378.4 23.9 215 834-1060 7-231 (271)
236 PRK13633 cobalt transporter AT 100.0 5.1E-42 1.1E-46 380.0 23.8 217 834-1061 4-234 (280)
237 PRK14245 phosphate ABC transpo 100.0 3.7E-42 8E-47 375.8 22.3 221 834-1064 3-238 (250)
238 PRK14240 phosphate transporter 100.0 5.4E-42 1.2E-46 374.8 23.6 224 833-1066 2-240 (250)
239 PRK10575 iron-hydroxamate tran 100.0 4.3E-42 9.4E-47 378.0 23.0 221 834-1070 11-245 (265)
240 cd03218 ABC_YhbG The ABC trans 100.0 4.3E-42 9.2E-47 371.5 22.5 216 835-1060 1-222 (232)
241 PRK14239 phosphate transporter 100.0 5.3E-42 1.1E-46 375.5 23.4 220 834-1063 5-239 (252)
242 PRK11607 potG putrescine trans 100.0 6.7E-42 1.5E-46 390.1 25.1 219 833-1067 18-246 (377)
243 cd03226 ABC_cobalt_CbiO_domain 100.0 2.2E-42 4.8E-47 366.0 19.5 199 836-1050 1-205 (205)
244 TIGR03411 urea_trans_UrtD urea 100.0 5.2E-42 1.1E-46 373.1 22.9 221 835-1060 3-231 (242)
245 cd03266 ABC_NatA_sodium_export 100.0 4.5E-42 9.7E-47 367.6 22.0 207 835-1053 2-218 (218)
246 TIGR00960 3a0501s02 Type II (G 100.0 2.3E-42 4.9E-47 369.2 19.7 203 206-419 2-216 (216)
247 PRK13537 nodulation ABC transp 100.0 4.3E-42 9.2E-47 383.8 22.7 213 834-1061 7-228 (306)
248 PRK14262 phosphate ABC transpo 100.0 5.2E-42 1.1E-46 374.9 22.7 227 834-1070 3-244 (250)
249 cd03268 ABC_BcrA_bacitracin_re 100.0 4.5E-42 9.8E-47 364.7 21.6 203 835-1053 1-208 (208)
250 PRK14256 phosphate ABC transpo 100.0 8.7E-42 1.9E-46 373.4 24.5 224 832-1065 2-241 (252)
251 PRK10070 glycine betaine trans 100.0 5.2E-42 1.1E-46 391.7 23.7 205 851-1066 42-260 (400)
252 PRK10619 histidine/lysine/argi 100.0 7E-42 1.5E-46 375.0 23.8 218 832-1062 3-243 (257)
253 PRK13635 cbiO cobalt transport 100.0 5.9E-42 1.3E-46 378.6 23.2 216 205-431 5-230 (279)
254 cd03219 ABC_Mj1267_LivG_branch 100.0 3.1E-42 6.7E-47 373.6 20.5 221 206-430 1-232 (236)
255 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.8E-42 6E-47 369.2 19.8 204 835-1049 1-218 (218)
256 PRK11308 dppF dipeptide transp 100.0 8.8E-42 1.9E-46 383.6 24.8 227 834-1070 5-254 (327)
257 PRK09452 potA putrescine/sperm 100.0 5.5E-42 1.2E-46 390.0 23.2 213 204-431 13-235 (375)
258 PRK13644 cbiO cobalt transport 100.0 8.2E-42 1.8E-46 376.8 24.0 213 835-1060 2-224 (274)
259 PRK13640 cbiO cobalt transport 100.0 9.8E-42 2.1E-46 377.8 24.6 216 833-1060 4-232 (282)
260 PRK14269 phosphate ABC transpo 100.0 5.1E-42 1.1E-46 373.6 21.8 218 205-431 2-231 (246)
261 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.4E-41 3.1E-46 360.4 24.5 203 204-425 5-207 (207)
262 PRK11614 livF leucine/isoleuci 100.0 1.2E-41 2.6E-46 368.9 24.2 218 834-1060 5-226 (237)
263 PRK14249 phosphate ABC transpo 100.0 1.2E-41 2.7E-46 371.9 24.5 218 834-1061 4-236 (251)
264 PRK13647 cbiO cobalt transport 100.0 9.3E-42 2E-46 376.4 23.3 212 205-428 4-225 (274)
265 TIGR03410 urea_trans_UrtE urea 100.0 4.8E-42 1E-46 370.4 20.5 213 835-1060 1-221 (230)
266 PRK14260 phosphate ABC transpo 100.0 9.9E-42 2.1E-46 374.1 23.3 221 833-1063 6-246 (259)
267 PRK09493 glnQ glutamine ABC tr 100.0 9.5E-42 2.1E-46 370.4 22.9 213 835-1061 2-226 (240)
268 PRK11231 fecE iron-dicitrate t 100.0 9.1E-42 2E-46 373.7 22.9 221 835-1071 3-236 (255)
269 cd03301 ABC_MalK_N The N-termi 100.0 5.7E-42 1.2E-46 365.5 20.7 203 835-1053 1-213 (213)
270 cd03247 ABCC_cytochrome_bd The 100.0 6.8E-42 1.5E-46 353.4 20.6 178 835-1053 1-178 (178)
271 PRK14243 phosphate transporter 100.0 1.6E-41 3.4E-46 373.0 24.8 220 834-1063 10-251 (264)
272 PRK14238 phosphate transporter 100.0 1.3E-41 2.8E-46 374.9 24.1 220 834-1063 24-258 (271)
273 PRK14261 phosphate ABC transpo 100.0 1.3E-41 2.8E-46 372.3 23.9 227 834-1070 6-247 (253)
274 PRK11264 putative amino-acid A 100.0 2.2E-41 4.7E-46 370.1 25.7 218 835-1062 4-235 (250)
275 PRK14254 phosphate ABC transpo 100.0 1.7E-41 3.6E-46 375.9 24.9 220 833-1062 38-271 (285)
276 PRK13643 cbiO cobalt transport 100.0 8.1E-42 1.8E-46 379.3 22.5 216 206-431 2-234 (288)
277 PRK10851 sulfate/thiosulfate t 100.0 6E-42 1.3E-46 388.1 21.8 212 205-431 2-227 (353)
278 PRK13637 cbiO cobalt transport 100.0 1E-41 2.3E-46 378.2 23.2 217 206-431 3-235 (287)
279 PRK14266 phosphate ABC transpo 100.0 1.7E-41 3.6E-46 370.9 24.4 224 834-1067 3-241 (250)
280 TIGR03258 PhnT 2-aminoethylpho 100.0 5.4E-42 1.2E-46 388.7 21.2 214 203-431 3-229 (362)
281 TIGR02211 LolD_lipo_ex lipopro 100.0 9.1E-42 2E-46 366.1 21.8 205 835-1050 2-220 (221)
282 PRK11124 artP arginine transpo 100.0 1.3E-41 2.7E-46 370.0 23.1 212 835-1060 3-230 (242)
283 PRK11153 metN DL-methionine tr 100.0 8.4E-42 1.8E-46 387.3 22.4 215 206-431 2-231 (343)
284 cd03263 ABC_subfamily_A The AB 100.0 8.7E-42 1.9E-46 365.9 21.3 211 206-428 1-219 (220)
285 PRK11247 ssuB aliphatic sulfon 100.0 1.5E-41 3.2E-46 369.9 23.3 204 834-1056 12-219 (257)
286 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.6E-42 1.2E-46 367.1 19.7 205 835-1055 1-218 (220)
287 PRK13648 cbiO cobalt transport 100.0 1.8E-41 3.9E-46 373.9 24.3 216 834-1061 7-232 (269)
288 cd03300 ABC_PotA_N PotA is an 100.0 8.9E-42 1.9E-46 368.3 21.2 211 835-1061 1-221 (232)
289 COG1118 CysA ABC-type sulfate/ 100.0 4.7E-42 1E-46 357.5 18.3 217 834-1066 2-233 (345)
290 PRK14270 phosphate ABC transpo 100.0 2E-41 4.3E-46 370.4 24.2 219 834-1062 4-237 (251)
291 cd03256 ABC_PhnC_transporter A 100.0 1.1E-41 2.4E-46 370.7 22.1 212 206-429 1-233 (241)
292 PRK14271 phosphate ABC transpo 100.0 3.3E-41 7.2E-46 372.1 26.2 220 834-1063 21-254 (276)
293 PRK14250 phosphate ABC transpo 100.0 2E-41 4.4E-46 367.5 24.0 215 205-431 3-222 (241)
294 TIGR02673 FtsE cell division A 100.0 7.5E-42 1.6E-46 364.8 20.3 201 835-1048 2-214 (214)
295 PRK09536 btuD corrinoid ABC tr 100.0 1E-41 2.3E-46 389.4 22.6 214 205-431 3-229 (402)
296 TIGR02769 nickel_nikE nickel i 100.0 2.3E-41 5E-46 372.2 24.4 226 835-1070 3-250 (265)
297 cd03296 ABC_CysA_sulfate_impor 100.0 1.3E-41 2.8E-46 368.9 22.0 211 206-431 3-227 (239)
298 PRK13548 hmuV hemin importer A 100.0 2.7E-41 5.8E-46 369.9 24.7 212 835-1060 3-230 (258)
299 PRK11022 dppD dipeptide transp 100.0 2.1E-41 4.4E-46 380.9 24.4 228 835-1070 4-253 (326)
300 PRK10253 iron-enterobactin tra 100.0 1.8E-41 3.8E-46 373.2 23.3 213 834-1060 7-233 (265)
301 PRK13638 cbiO cobalt transport 100.0 1.6E-41 3.4E-46 374.8 22.9 212 835-1060 2-225 (271)
302 PRK09473 oppD oligopeptide tra 100.0 1.3E-41 2.9E-46 382.7 22.6 229 834-1070 12-261 (330)
303 PRK13645 cbiO cobalt transport 100.0 1.8E-41 3.9E-46 377.7 23.4 219 832-1060 4-240 (289)
304 TIGR00972 3a0107s01c2 phosphat 100.0 1.5E-41 3.2E-46 370.4 22.3 217 206-431 2-233 (247)
305 PRK13649 cbiO cobalt transport 100.0 3.1E-41 6.7E-46 374.6 25.1 216 835-1060 3-234 (280)
306 PRK13641 cbiO cobalt transport 100.0 2.3E-41 4.9E-46 375.9 24.0 216 834-1060 2-234 (287)
307 TIGR03415 ABC_choXWV_ATP choli 100.0 1.3E-41 2.8E-46 385.5 22.3 209 850-1069 37-263 (382)
308 TIGR02315 ABC_phnC phosphonate 100.0 1.7E-41 3.7E-46 369.5 22.4 211 206-428 2-233 (243)
309 cd03259 ABC_Carb_Solutes_like 100.0 7.3E-42 1.6E-46 364.5 19.0 203 206-423 1-213 (213)
310 PRK13646 cbiO cobalt transport 100.0 1.7E-41 3.7E-46 376.7 22.6 220 205-431 2-236 (286)
311 PRK10895 lipopolysaccharide AB 100.0 2E-41 4.4E-46 368.1 22.8 217 834-1060 3-226 (241)
312 PRK14273 phosphate ABC transpo 100.0 2E-41 4.3E-46 371.0 22.8 219 204-431 6-239 (254)
313 PRK14252 phosphate ABC transpo 100.0 3E-41 6.5E-46 371.6 24.3 223 830-1062 12-251 (265)
314 PRK14242 phosphate transporter 100.0 1.5E-41 3.3E-46 371.9 21.7 218 205-431 6-238 (253)
315 TIGR00968 3a0106s01 sulfate AB 100.0 2.9E-41 6.3E-46 365.3 23.7 211 835-1061 1-221 (237)
316 PRK13634 cbiO cobalt transport 100.0 1.6E-41 3.5E-46 377.4 22.1 216 206-431 3-236 (290)
317 PRK14241 phosphate transporter 100.0 2.5E-41 5.4E-46 370.9 23.3 218 834-1061 4-243 (258)
318 cd03292 ABC_FtsE_transporter F 100.0 1.4E-41 3.1E-46 362.8 20.7 202 835-1049 1-214 (214)
319 PRK13651 cobalt transporter AT 100.0 1.9E-41 4.2E-46 377.5 22.7 215 206-431 3-255 (305)
320 cd03225 ABC_cobalt_CbiO_domain 100.0 1.2E-41 2.6E-46 362.4 20.1 201 836-1048 1-211 (211)
321 cd03235 ABC_Metallic_Cations A 100.0 9.9E-42 2.1E-46 363.5 19.4 198 836-1053 1-213 (213)
322 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.1E-41 2.4E-46 364.7 19.8 207 206-419 1-218 (218)
323 PRK14263 phosphate ABC transpo 100.0 3.7E-41 8E-46 368.9 24.3 224 834-1067 8-252 (261)
324 PRK14258 phosphate ABC transpo 100.0 3E-41 6.4E-46 370.5 23.4 222 833-1064 6-249 (261)
325 TIGR01288 nodI ATP-binding ABC 100.0 2.4E-41 5.2E-46 378.7 23.0 213 834-1061 4-225 (303)
326 PRK14275 phosphate ABC transpo 100.0 3E-41 6.5E-46 374.4 23.5 226 833-1068 38-278 (286)
327 PRK14253 phosphate ABC transpo 100.0 4.1E-41 8.9E-46 367.6 24.2 219 834-1062 3-235 (249)
328 cd03258 ABC_MetN_methionine_tr 100.0 2.4E-41 5.2E-46 365.7 22.0 214 206-430 2-230 (233)
329 PRK11000 maltose/maltodextrin 100.0 1.9E-41 4E-46 387.4 22.3 212 205-431 3-224 (369)
330 PRK13639 cbiO cobalt transport 100.0 2.2E-41 4.8E-46 373.9 22.1 213 835-1060 2-226 (275)
331 cd03224 ABC_TM1139_LivF_branch 100.0 2.1E-41 4.6E-46 363.6 21.3 216 206-429 1-220 (222)
332 cd03226 ABC_cobalt_CbiO_domain 100.0 1.2E-41 2.7E-46 360.3 19.0 199 207-420 1-205 (205)
333 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.5E-40 3.3E-45 365.3 28.3 219 202-438 36-255 (282)
334 cd03290 ABCC_SUR1_N The SUR do 100.0 4.7E-41 1E-45 359.4 23.7 210 836-1048 2-218 (218)
335 PRK10744 pstB phosphate transp 100.0 3E-41 6.4E-46 370.5 22.7 220 203-431 11-245 (260)
336 TIGR03873 F420-0_ABC_ATP propo 100.0 3.4E-41 7.4E-46 369.4 23.0 212 835-1060 2-226 (256)
337 cd03264 ABC_drug_resistance_li 100.0 2.1E-41 4.6E-46 360.3 20.8 203 206-423 1-211 (211)
338 cd03250 ABCC_MRP_domain1 Domai 100.0 3.8E-41 8.3E-46 356.2 22.5 199 206-418 1-204 (204)
339 TIGR03522 GldA_ABC_ATP gliding 100.0 3.1E-41 6.7E-46 377.1 22.8 212 835-1061 3-222 (301)
340 PRK10771 thiQ thiamine transpo 100.0 5.9E-41 1.3E-45 362.1 24.2 209 835-1061 2-220 (232)
341 PRK14272 phosphate ABC transpo 100.0 4E-41 8.6E-46 368.5 23.1 225 834-1068 4-244 (252)
342 PRK14265 phosphate ABC transpo 100.0 8.8E-41 1.9E-45 368.6 25.9 221 833-1063 19-261 (274)
343 PRK11300 livG leucine/isoleuci 100.0 4.8E-41 1E-45 368.6 23.7 220 834-1060 5-243 (255)
344 PRK10908 cell division protein 100.0 3.9E-41 8.5E-46 361.1 22.4 204 835-1051 2-217 (222)
345 PRK11629 lolD lipoprotein tran 100.0 3E-41 6.5E-46 364.6 21.5 209 205-424 5-228 (233)
346 cd03265 ABC_DrrA DrrA is the A 100.0 3E-41 6.5E-46 361.5 21.3 209 206-428 1-219 (220)
347 PRK15112 antimicrobial peptide 100.0 6.3E-41 1.4E-45 368.9 24.4 229 834-1073 4-253 (267)
348 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.6E-41 9.9E-46 357.8 22.4 201 835-1053 1-211 (211)
349 PRK13632 cbiO cobalt transport 100.0 4.8E-41 1E-45 370.7 23.3 216 205-431 7-232 (271)
350 PRK10584 putative ABC transpor 100.0 5.1E-41 1.1E-45 361.9 22.9 208 834-1052 6-227 (228)
351 PRK13536 nodulation factor exp 100.0 3.3E-41 7.2E-46 380.1 22.3 213 834-1061 41-262 (340)
352 PRK14255 phosphate ABC transpo 100.0 5E-41 1.1E-45 367.6 22.9 222 834-1065 5-241 (252)
353 PRK14246 phosphate ABC transpo 100.0 4.9E-41 1.1E-45 367.1 22.7 227 834-1070 10-251 (257)
354 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.8E-41 6.1E-46 367.0 20.7 218 206-431 1-226 (242)
355 PRK14235 phosphate transporter 100.0 3.7E-41 8.1E-46 370.7 22.0 219 203-430 17-251 (267)
356 PRK13636 cbiO cobalt transport 100.0 4.8E-41 1E-45 372.5 22.9 215 205-431 5-232 (283)
357 PRK11607 potG putrescine trans 100.0 4.5E-41 9.7E-46 383.3 23.2 213 204-431 18-240 (377)
358 cd03247 ABCC_cytochrome_bd The 100.0 3.8E-41 8.2E-46 347.9 20.4 178 206-423 1-178 (178)
359 PRK15093 antimicrobial peptide 100.0 5.3E-41 1.2E-45 379.1 23.3 229 834-1070 3-258 (330)
360 cd03269 ABC_putative_ATPase Th 100.0 3.3E-41 7.1E-46 358.6 20.4 201 835-1053 1-210 (210)
361 cd03266 ABC_NatA_sodium_export 100.0 4.6E-41 1E-45 359.8 21.6 206 206-423 2-218 (218)
362 PRK13640 cbiO cobalt transport 100.0 6.8E-41 1.5E-45 371.1 23.7 216 205-431 5-233 (282)
363 cd03268 ABC_BcrA_bacitracin_re 100.0 3.8E-41 8.3E-46 357.5 20.7 203 206-423 1-208 (208)
364 cd03246 ABCC_Protease_Secretio 100.0 4.8E-41 1E-45 345.2 20.7 172 835-1049 1-173 (173)
365 PRK11701 phnK phosphonate C-P 100.0 1.8E-40 3.9E-45 364.1 26.6 227 834-1070 6-251 (258)
366 PRK09984 phosphonate/organopho 100.0 1E-40 2.2E-45 366.9 24.6 229 834-1079 4-258 (262)
367 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 4.5E-41 9.7E-46 364.0 21.5 216 206-431 2-222 (236)
368 PRK13537 nodulation ABC transp 100.0 3.4E-41 7.3E-46 376.6 21.0 214 204-431 6-228 (306)
369 cd03218 ABC_YhbG The ABC trans 100.0 3.3E-41 7.2E-46 364.5 20.3 216 206-430 1-222 (232)
370 PRK11144 modC molybdate transp 100.0 6.6E-41 1.4E-45 381.3 23.7 212 835-1063 2-221 (352)
371 cd03257 ABC_NikE_OppD_transpor 100.0 8.7E-41 1.9E-45 360.5 23.4 212 835-1053 2-228 (228)
372 PRK13644 cbiO cobalt transport 100.0 8.9E-41 1.9E-45 368.6 23.8 213 206-430 2-224 (274)
373 PRK13642 cbiO cobalt transport 100.0 8.7E-41 1.9E-45 369.6 23.7 216 205-431 4-230 (277)
374 COG0410 LivF ABC-type branched 100.0 5.8E-41 1.2E-45 339.0 20.2 221 205-432 3-228 (237)
375 PRK14267 phosphate ABC transpo 100.0 5.6E-41 1.2E-45 367.4 21.7 218 205-431 4-238 (253)
376 COG0410 LivF ABC-type branched 100.0 9.5E-41 2.1E-45 337.4 21.5 221 834-1062 3-228 (237)
377 TIGR02211 LolD_lipo_ex lipopro 100.0 6E-41 1.3E-45 359.7 21.5 208 206-420 2-220 (221)
378 cd03299 ABC_ModC_like Archeal 100.0 1E-40 2.2E-45 360.6 23.3 211 835-1062 1-221 (235)
379 PRK10247 putative ABC transpor 100.0 6E-41 1.3E-45 359.9 21.3 210 834-1056 7-223 (225)
380 cd03262 ABC_HisP_GlnQ_permease 100.0 4E-41 8.7E-46 359.0 19.7 201 835-1049 1-213 (213)
381 PRK14264 phosphate ABC transpo 100.0 1.3E-40 2.8E-45 372.5 24.5 219 833-1061 44-290 (305)
382 cd03294 ABC_Pro_Gly_Bertaine T 100.0 3.2E-41 7E-46 371.4 19.2 212 207-431 26-251 (269)
383 PRK10575 iron-hydroxamate tran 100.0 6.8E-41 1.5E-45 368.5 21.8 213 205-430 11-237 (265)
384 COG4175 ProV ABC-type proline/ 100.0 2.9E-41 6.2E-46 351.2 17.6 217 205-432 4-256 (386)
385 PRK13633 cobalt transporter AT 100.0 9.1E-41 2E-45 370.0 22.8 216 205-431 4-234 (280)
386 PRK13648 cbiO cobalt transport 100.0 1.2E-40 2.5E-45 367.5 23.5 216 205-431 7-232 (269)
387 PRK13652 cbiO cobalt transport 100.0 1.1E-40 2.3E-45 368.9 23.3 214 206-431 4-228 (277)
388 PRK13547 hmuV hemin importer A 100.0 1.3E-40 2.8E-45 365.5 23.8 212 835-1060 2-244 (272)
389 cd03225 ABC_cobalt_CbiO_domain 100.0 4.8E-41 1E-45 357.8 19.7 201 207-418 1-211 (211)
390 PRK14247 phosphate ABC transpo 100.0 8E-41 1.7E-45 365.5 21.9 218 205-431 3-235 (250)
391 PRK14274 phosphate ABC transpo 100.0 1E-40 2.2E-45 366.3 22.7 218 205-431 12-244 (259)
392 PRK14259 phosphate ABC transpo 100.0 1.3E-40 2.8E-45 366.5 23.3 219 204-431 12-254 (269)
393 cd03301 ABC_MalK_N The N-termi 100.0 5.7E-41 1.2E-45 357.7 19.8 203 206-423 1-213 (213)
394 PRK11831 putative ABC transpor 100.0 9.5E-41 2.1E-45 367.9 22.0 214 205-431 7-234 (269)
395 PRK00349 uvrA excinuclease ABC 100.0 4.3E-40 9.3E-45 407.2 30.3 108 962-1069 818-936 (943)
396 PRK09493 glnQ glutamine ABC tr 100.0 8.4E-41 1.8E-45 363.0 21.1 217 206-431 2-226 (240)
397 PRK11247 ssuB aliphatic sulfon 100.0 1.3E-40 2.8E-45 362.4 22.5 205 204-426 11-219 (257)
398 TIGR01188 drrA daunorubicin re 100.0 8.3E-41 1.8E-45 374.2 21.4 200 850-1061 6-214 (302)
399 cd03246 ABCC_Protease_Secretio 100.0 9.6E-41 2.1E-45 343.0 20.1 172 206-419 1-173 (173)
400 PRK11231 fecE iron-dicitrate t 100.0 1.1E-40 2.4E-45 365.1 21.9 212 206-430 3-227 (255)
401 TIGR03411 urea_trans_UrtD urea 100.0 1.2E-40 2.5E-45 362.6 21.9 221 206-430 3-231 (242)
402 TIGR01277 thiQ thiamine ABC tr 100.0 1.5E-40 3.2E-45 354.1 22.2 202 835-1054 1-212 (213)
403 COG1131 CcmA ABC-type multidru 100.0 1E-40 2.2E-45 368.8 21.6 214 834-1061 4-227 (293)
404 cd03293 ABC_NrtD_SsuB_transpor 100.0 6.1E-41 1.3E-45 359.1 19.1 204 206-425 1-218 (220)
405 PRK15079 oligopeptide ABC tran 100.0 1E-40 2.2E-45 375.2 21.8 223 205-437 8-259 (331)
406 PRK13638 cbiO cobalt transport 100.0 1.4E-40 3.1E-45 367.2 22.3 213 206-431 2-226 (271)
407 cd03290 ABCC_SUR1_N The SUR do 100.0 2.2E-40 4.7E-45 354.3 23.1 210 207-418 2-218 (218)
408 PRK14240 phosphate transporter 100.0 1.8E-40 3.8E-45 362.8 22.8 219 204-431 2-235 (250)
409 PRK10418 nikD nickel transport 100.0 2.5E-40 5.4E-45 361.9 24.0 227 834-1074 4-245 (254)
410 cd03234 ABCG_White The White s 100.0 9.4E-41 2E-45 359.0 20.3 214 835-1053 4-226 (226)
411 TIGR01978 sufC FeS assembly AT 100.0 1.2E-40 2.6E-45 363.0 21.4 212 835-1059 1-233 (243)
412 PRK14237 phosphate transporter 100.0 1.8E-40 3.9E-45 365.3 23.0 220 203-431 18-252 (267)
413 TIGR03410 urea_trans_UrtE urea 100.0 6.3E-41 1.4E-45 361.7 19.0 211 206-428 1-219 (230)
414 TIGR02673 FtsE cell division A 100.0 8.8E-41 1.9E-45 356.6 19.9 201 206-418 2-214 (214)
415 PRK13649 cbiO cobalt transport 100.0 1.8E-40 3.8E-45 368.5 23.0 218 206-430 3-234 (280)
416 PRK11614 livF leucine/isoleuci 100.0 2.4E-40 5.1E-45 358.8 23.5 218 205-430 5-226 (237)
417 PRK13548 hmuV hemin importer A 100.0 2.4E-40 5.2E-45 362.4 23.7 212 206-430 3-230 (258)
418 PRK14248 phosphate ABC transpo 100.0 1.4E-40 3.1E-45 366.8 22.0 218 205-431 21-253 (268)
419 TIGR03005 ectoine_ehuA ectoine 100.0 1.3E-40 2.8E-45 364.1 21.4 217 206-431 1-237 (252)
420 PRK10070 glycine betaine trans 100.0 1E-40 2.3E-45 381.0 21.4 199 222-431 43-255 (400)
421 PRK14236 phosphate transporter 100.0 1.7E-40 3.7E-45 366.5 22.2 219 204-431 24-257 (272)
422 PRK11124 artP arginine transpo 100.0 2E-40 4.4E-45 360.5 22.5 217 205-430 2-230 (242)
423 TIGR02769 nickel_nikE nickel i 100.0 1.9E-40 4.2E-45 364.9 22.4 217 206-433 3-243 (265)
424 PRK13645 cbiO cobalt transport 100.0 1.6E-40 3.5E-45 370.0 22.0 221 204-430 5-240 (289)
425 PRK10247 putative ABC transpor 100.0 1.6E-40 3.5E-45 356.5 21.2 209 205-426 7-223 (225)
426 PRK14245 phosphate ABC transpo 100.0 1.2E-40 2.5E-45 364.0 20.4 218 205-431 3-235 (250)
427 cd03292 ABC_FtsE_transporter F 100.0 1.3E-40 2.9E-45 355.3 20.4 202 206-419 1-214 (214)
428 PRK11264 putative amino-acid A 100.0 2.6E-40 5.6E-45 361.7 23.1 218 205-431 3-234 (250)
429 TIGR01288 nodI ATP-binding ABC 100.0 1.3E-40 2.7E-45 372.9 21.1 217 205-431 4-225 (303)
430 PRK14249 phosphate ABC transpo 100.0 2.1E-40 4.6E-45 362.2 22.4 218 205-431 4-236 (251)
431 PRK10895 lipopolysaccharide AB 100.0 1.5E-40 3.2E-45 361.3 21.0 217 205-430 3-226 (241)
432 PRK14268 phosphate ABC transpo 100.0 1.6E-40 3.4E-45 364.4 21.2 219 204-431 11-243 (258)
433 PRK13641 cbiO cobalt transport 100.0 2E-40 4.3E-45 368.3 22.3 219 205-430 2-234 (287)
434 cd03257 ABC_NikE_OppD_transpor 100.0 1.4E-40 3E-45 358.9 20.4 211 206-423 2-228 (228)
435 PRK10253 iron-enterobactin tra 100.0 2.9E-40 6.2E-45 363.5 22.8 214 204-430 6-233 (265)
436 PRK13536 nodulation factor exp 100.0 1.6E-40 3.5E-45 374.5 21.2 217 205-431 41-262 (340)
437 cd03235 ABC_Metallic_Cations A 100.0 9.7E-41 2.1E-45 355.8 18.2 198 207-423 1-213 (213)
438 PRK14251 phosphate ABC transpo 100.0 1.5E-40 3.3E-45 363.6 20.1 218 205-431 4-236 (251)
439 PRK14239 phosphate transporter 100.0 2.2E-40 4.8E-45 362.7 21.4 218 205-431 5-237 (252)
440 TIGR03522 GldA_ABC_ATP gliding 100.0 2.3E-40 4.9E-45 370.2 21.7 216 206-431 3-222 (301)
441 TIGR02142 modC_ABC molybdenum 100.0 2.7E-40 5.8E-45 377.0 22.7 212 839-1066 4-227 (354)
442 PRK14243 phosphate transporter 100.0 3.5E-40 7.5E-45 362.4 22.8 218 205-431 10-249 (264)
443 PRK10619 histidine/lysine/argi 100.0 2.6E-40 5.6E-45 362.7 21.6 219 204-431 4-242 (257)
444 PRK11248 tauB taurine transpor 100.0 2.5E-40 5.3E-45 361.1 21.3 202 835-1055 2-215 (255)
445 PRK10584 putative ABC transpor 100.0 3.7E-40 7.9E-45 355.3 22.2 207 205-422 6-227 (228)
446 PRK14253 phosphate ABC transpo 100.0 3.4E-40 7.5E-45 360.3 22.2 217 205-430 3-233 (249)
447 PRK14271 phosphate ABC transpo 100.0 5.2E-40 1.1E-44 362.6 23.7 220 205-431 21-252 (276)
448 TIGR03415 ABC_choXWV_ATP choli 100.0 2.2E-40 4.9E-45 375.4 21.2 200 221-431 38-255 (382)
449 PRK14256 phosphate ABC transpo 100.0 3.5E-40 7.7E-45 360.7 22.0 219 204-431 3-237 (252)
450 COG4555 NatA ABC-type Na+ tran 100.0 5.7E-41 1.2E-45 327.9 13.9 219 206-431 2-223 (245)
451 TIGR03873 F420-0_ABC_ATP propo 100.0 3.6E-40 7.7E-45 361.3 21.9 212 206-430 2-226 (256)
452 PRK10419 nikE nickel transport 100.0 4.6E-40 9.9E-45 362.0 22.9 229 835-1071 4-251 (268)
453 PRK10908 cell division protein 100.0 4.2E-40 9.1E-45 353.1 21.9 204 206-421 2-217 (222)
454 PRK14244 phosphate ABC transpo 100.0 1.6E-40 3.5E-45 363.1 19.0 217 206-431 6-238 (251)
455 PRK14238 phosphate transporter 100.0 3.1E-40 6.7E-45 364.0 21.4 218 205-431 24-256 (271)
456 COG4175 ProV ABC-type proline/ 100.0 1.5E-40 3.3E-45 345.8 17.7 224 834-1068 4-262 (386)
457 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.3E-40 9.4E-45 350.3 21.7 201 206-423 1-211 (211)
458 PRK14270 phosphate ABC transpo 100.0 3.6E-40 7.7E-45 360.4 21.5 218 205-431 4-236 (251)
459 PRK14261 phosphate ABC transpo 100.0 3.2E-40 7E-45 361.2 21.2 218 205-431 6-238 (253)
460 COG4555 NatA ABC-type Na+ tran 100.0 1.9E-40 4.2E-45 324.2 17.2 213 835-1061 2-223 (245)
461 PRK11300 livG leucine/isoleuci 100.0 4.3E-40 9.2E-45 361.1 22.1 222 205-430 5-243 (255)
462 PRK13639 cbiO cobalt transport 100.0 3.4E-40 7.5E-45 364.4 21.2 214 206-431 2-227 (275)
463 PRK14262 phosphate ABC transpo 100.0 3.7E-40 8.1E-45 360.2 20.7 218 205-431 3-235 (250)
464 PRK09984 phosphonate/organopho 100.0 9.1E-40 2E-44 359.4 23.6 211 205-428 4-240 (262)
465 cd03262 ABC_HisP_GlnQ_permease 100.0 2.9E-40 6.4E-45 352.4 19.1 205 206-419 1-213 (213)
466 TIGR02982 heterocyst_DevA ABC 100.0 5.7E-40 1.2E-44 351.4 21.4 204 835-1049 2-219 (220)
467 PRK11308 dppF dipeptide transp 100.0 8.2E-40 1.8E-44 367.7 23.6 223 205-437 5-252 (327)
468 PRK11144 modC molybdate transp 100.0 4.4E-40 9.6E-45 374.5 21.7 211 206-432 2-220 (352)
469 cd03269 ABC_putative_ATPase Th 100.0 3.2E-40 7E-45 351.0 19.2 205 206-423 1-210 (210)
470 PRK10771 thiQ thiamine transpo 100.0 1E-39 2.2E-44 352.5 23.2 209 206-431 2-220 (232)
471 TIGR03740 galliderm_ABC gallid 100.0 6.1E-40 1.3E-44 352.1 21.2 205 835-1057 1-210 (223)
472 PRK11022 dppD dipeptide transp 100.0 8E-40 1.7E-44 368.0 22.9 219 205-431 3-244 (326)
473 PRK14260 phosphate ABC transpo 100.0 5.7E-40 1.2E-44 360.1 21.1 219 204-431 6-244 (259)
474 PRK09473 oppD oligopeptide tra 100.0 4.7E-40 1E-44 370.1 20.7 228 205-437 12-259 (330)
475 PRK14254 phosphate ABC transpo 100.0 9.1E-40 2E-44 362.0 22.7 219 204-431 38-270 (285)
476 COG1131 CcmA ABC-type multidru 100.0 5.6E-40 1.2E-44 362.9 20.8 214 205-431 4-227 (293)
477 TIGR02323 CP_lyasePhnK phospho 100.0 1.3E-39 2.8E-44 356.7 23.4 226 834-1069 3-247 (253)
478 cd03233 ABC_PDR_domain1 The pl 100.0 8.6E-40 1.9E-44 344.4 21.2 191 834-1053 3-202 (202)
479 PRK13547 hmuV hemin importer A 100.0 1.1E-39 2.4E-44 358.2 22.6 221 206-430 2-244 (272)
480 cd03230 ABC_DR_subfamily_A Thi 100.0 7.3E-40 1.6E-44 336.5 19.6 170 835-1049 1-173 (173)
481 COG0444 DppD ABC-type dipeptid 100.0 8.9E-40 1.9E-44 348.1 20.9 229 835-1071 2-254 (316)
482 PRK15112 antimicrobial peptide 100.0 1.4E-39 3.1E-44 358.2 23.1 226 205-440 4-251 (267)
483 PRK14241 phosphate transporter 100.0 7.6E-40 1.7E-44 359.1 20.9 218 205-431 4-243 (258)
484 TIGR00968 3a0106s01 sulfate AB 100.0 1.2E-39 2.5E-44 352.8 21.8 210 206-430 1-220 (237)
485 cd03300 ABC_PotA_N PotA is an 100.0 5.6E-40 1.2E-44 354.3 19.2 210 206-430 1-220 (232)
486 PRK14265 phosphate ABC transpo 100.0 2.2E-39 4.8E-44 357.5 24.3 219 204-431 19-259 (274)
487 cd03229 ABC_Class3 This class 100.0 8.9E-40 1.9E-44 337.5 19.8 172 835-1048 1-178 (178)
488 TIGR01978 sufC FeS assembly AT 100.0 7.8E-40 1.7E-44 356.6 20.5 214 206-428 1-232 (243)
489 PRK14272 phosphate ABC transpo 100.0 8.8E-40 1.9E-44 357.9 20.8 218 205-431 4-237 (252)
490 COG4619 ABC-type uncharacteriz 100.0 3.2E-40 7E-45 312.4 14.7 191 219-419 15-212 (223)
491 PRK14252 phosphate ABC transpo 100.0 1.2E-39 2.7E-44 358.7 21.7 218 204-430 15-249 (265)
492 PRK09544 znuC high-affinity zi 100.0 2.5E-39 5.5E-44 351.7 23.9 208 834-1070 4-217 (251)
493 PRK14275 phosphate ABC transpo 100.0 1E-39 2.2E-44 362.2 21.1 219 204-431 38-271 (286)
494 TIGR01277 thiQ thiamine ABC tr 100.0 1.8E-39 3.9E-44 345.7 22.2 202 206-424 1-212 (213)
495 COG1137 YhbG ABC-type (unclass 100.0 7.3E-41 1.6E-45 326.8 10.2 224 204-432 3-230 (243)
496 TIGR01188 drrA daunorubicin re 100.0 9.5E-40 2.1E-44 365.6 20.5 204 214-431 2-214 (302)
497 PRK14266 phosphate ABC transpo 100.0 1.5E-39 3.1E-44 355.6 21.4 218 205-431 3-235 (250)
498 PRK15093 antimicrobial peptide 100.0 2E-39 4.3E-44 366.3 22.7 225 205-437 3-256 (330)
499 PRK14263 phosphate ABC transpo 100.0 1.9E-39 4E-44 355.4 21.8 218 205-431 8-246 (261)
500 cd03228 ABCC_MRP_Like The MRP 100.0 1.9E-39 4E-44 332.8 20.3 171 835-1048 1-171 (171)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-197 Score=1770.98 Aligned_cols=1070 Identities=52% Similarity=0.845 Sum_probs=985.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc
Q 001411 2 QTGHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFV 81 (1082)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~ 81 (1082)
|++.+++.+.+|++++++.|+..|+|+++++.+.|++++.+.++.+.+.+...+.+++++++.+.++|++.++|||.+|+
T Consensus 148 Kvg~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~ 227 (1228)
T KOG0055|consen 148 KVGNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFN 227 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHH
Q 001411 82 GEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQA 161 (1082)
Q Consensus 82 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~ 161 (1082)
.|+.+.++|.+..+...+...+...+.++..++..++.++.+++.+|||+.++..+..++|.+++++++++.....+++.
T Consensus 228 gq~~e~~ry~~~L~~~~k~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa 307 (1228)
T KOG0055|consen 228 GEKKEIERYSKALENALKFGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQA 307 (1228)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCC-ccccceeEEEeCCCEEEEEc
Q 001411 162 APNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPH-MVFENLNFSVDAGKTFAFVG 240 (1082)
Q Consensus 162 ~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~-~~l~~i~l~i~~g~~~~ivG 240 (1082)
.|.+..+..+++|+.+|++.++..+..+.. ...+.......+.|+|+||+|+||.+++ ++|+|+||+|++|+.+||||
T Consensus 308 ~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~-~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG 386 (1228)
T KOG0055|consen 308 SPHLSAFAKARAAAYRIFETIDRKPSIDPY-SKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVG 386 (1228)
T ss_pred ccchHHHhccccchHHHHHHhcCCCCCCcc-cccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEEC
Confidence 999999999999999999999877665422 2222234456789999999999998874 49999999999999999999
Q ss_pred CCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHh
Q 001411 241 PSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAA 320 (1082)
Q Consensus 241 ~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~ 320 (1082)
||||||||++++|.|+|+|++|+|.+||.|+++++.+|+|++||.|+|+|.||++||+|||.||+|+++.+++.+||+++
T Consensus 387 ~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~a 466 (1228)
T KOG0055|consen 387 PSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAA 466 (1228)
T ss_pred CCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEcc
Q 001411 321 NAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAH 400 (1082)
Q Consensus 321 ~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH 400 (1082)
++++|+..||+||+|.+||+|.+|||||||||||||||++||+||||||||||||+++|+.++++|.+..+|+|+|+|||
T Consensus 467 na~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaH 546 (1228)
T KOG0055|consen 467 NAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAH 546 (1228)
T ss_pred cHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHhhhccccCCC--C--cccCCCCCCCC-CCCCCCCCcccch
Q 001411 401 RLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQSSEHLSNP--S--SICYSGSSRYS-SFRDFPSSRRYDV 475 (1082)
Q Consensus 401 ~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~-~~~~~~~~~~~~~ 475 (1082)
|++++++||+|++|++|+|+|.|+|+||++..|.|.++++.|......+. . ........+.. +....+..+....
T Consensus 547 RLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~ 626 (1228)
T KOG0055|consen 547 RLSTIRNADKIAVMEEGKIVEQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNR 626 (1228)
T ss_pred ehhhhhccCEEEEEECCEEEEecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCccc
Confidence 99999999999999999999999999999999999999998865442211 0 00000000000 0000000000000
Q ss_pred hhhh---hhhhhhccCCCCCCCchhHHHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHH
Q 001411 476 EFES---SKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVV 552 (1082)
Q Consensus 476 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (1082)
.... ....+.+..........++++++++++++|++++++.+++++.|...|++++.+++++..+...+++......
T Consensus 627 ~~~~~~~~~~e~~~~~~~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~ 706 (1228)
T KOG0055|consen 627 SNLLSVKPEGEDPEEPVSEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREV 706 (1228)
T ss_pred cccccccccccccccccccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHH
Confidence 0000 0000000000111145678999999999999999999999999999999999999999999876655555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHH
Q 001411 553 DQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADR 632 (1082)
Q Consensus 553 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~ 632 (1082)
..|.++|+++++..+++.+++.|++.+++++++.++|..+|+++++++++|||.++|+ |.|.+|+++|...++..+.+.
T Consensus 707 ~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~r 785 (1228)
T KOG0055|consen 707 RAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDR 785 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHH
Confidence 5599999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCc
Q 001411 633 LSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGI 712 (1082)
Q Consensus 633 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~ 712 (1082)
+..+++++..++.+++++|+++|+++++++++.|++++..+...+++..+..+.+..+.++.....|++++++||++|+.
T Consensus 786 l~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~ 865 (1228)
T KOG0055|consen 786 LSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCA 865 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 001411 713 EKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETL 792 (1082)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (1082)
|+++.+.|.+.++...+...+++.++++.+++++.+.++.+++++|+|.+++..|.+++.+++.+++++.+.+..+++..
T Consensus 866 e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~ 945 (1228)
T KOG0055|consen 866 EEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQAS 945 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCC
Q 001411 793 ALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQS 872 (1082)
Q Consensus 793 ~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~s 872 (1082)
.+.|++.++..|+.+++.+++++|..+++++.+...++.+|+|+|+||+|+||+||+.+||+|+||+|++||++|+||||
T Consensus 946 s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~S 1025 (1228)
T KOG0055|consen 946 SYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPS 1025 (1228)
T ss_pred hhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCC
Confidence 99999999999999999999999877765533434456899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcH
Q 001411 873 GSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANA 952 (1082)
Q Consensus 873 GSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l 952 (1082)
||||||++.+|.|||+|.+|.|.|||+||+++++++||++|++|+|||.||++||||||.||.++++++||.+|++.|++
T Consensus 1026 GsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANa 1105 (1228)
T KOG0055|consen 1026 GSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANA 1105 (1228)
T ss_pred CCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999666899999999999999
Q ss_pred HHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCc
Q 001411 953 HGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRL 1032 (1082)
Q Consensus 953 ~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl 1032 (1082)
|+||.+||+||||.|||+|.+||||||||||||||++|||||||||||||+||.++|+.||++|++...+||+|+|||||
T Consensus 1106 H~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRL 1185 (1228)
T KOG0055|consen 1106 HNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRL 1185 (1228)
T ss_pred HHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHHHHHhh
Q 001411 1033 STIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQ 1074 (1082)
Q Consensus 1033 ~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~~ 1074 (1082)
+||++||.|+|+++|+|+|+|||++|++ ++|.|++|++.|.
T Consensus 1186 STIqnaD~I~Vi~~G~VvE~GtH~~L~~-~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1186 STIQNADVIAVLKNGKVVEQGTHDELLA-KRGIYFRLVQLQS 1226 (1228)
T ss_pred hhhhcCCEEEEEECCEEEecccHHHHHh-CCCchHHHhhhcc
Confidence 9999999999999999999999999999 7999999998875
No 2
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-172 Score=1590.45 Aligned_cols=1035 Identities=23% Similarity=0.326 Sum_probs=840.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcc
Q 001411 7 LRYLSQFFVGFAVGFTSVWQL----TLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVG 82 (1082)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~l----~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~ 82 (1082)
+..+.....-++++.++.|.. +++.++++.+++.+..++++++++.+.+.++..+++.+.++|.++|||+||+|+|
T Consensus 319 ~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaW 398 (1381)
T KOG0054|consen 319 LHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAW 398 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhh
Confidence 344444444556666666654 4555566666777888999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCChHHHHHHHHHHHHHHHHHHHH
Q 001411 83 EAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGIL-VRHGDTNGGKAFTTIINVIFSGFALGQA 161 (1082)
Q Consensus 83 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v~~~~l~~g~~~~~~~~~~~~~~~l~~~ 161 (1082)
|+.|.+++++.|+++.+..+|.....++...+..+...+..+ +.+++|. ..++.+++..+|+++..+-....|+..+
T Consensus 399 E~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~--~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~ 476 (1381)
T KOG0054|consen 399 EKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSV--VTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFML 476 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888877766665555433 3455565 5577889989999887666667889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCC-CCCccccceeEEEeCCCEEEEEc
Q 001411 162 APNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPS-RPHMVFENLNFSVDAGKTFAFVG 240 (1082)
Q Consensus 162 ~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~-~~~~~l~~i~l~i~~g~~~~ivG 240 (1082)
+..+..+.++.+|.+|+.+|+..++..+ . ..........+..++++|.+|+|+. .+.+.|+||||+|++|+++||||
T Consensus 477 P~~i~~~vqa~VS~~Ri~~fl~~~e~~~-~-~~~~~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG 554 (1381)
T KOG0054|consen 477 PSVISQLVQAKVSLKRLKEFLLSEELDP-D-SVERSPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVG 554 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccCc-c-ccccCCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEEC
Confidence 9999999999999999999996543222 1 1110111223456999999999975 23449999999999999999999
Q ss_pred CCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHh
Q 001411 241 PSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAA 320 (1082)
Q Consensus 241 ~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~ 320 (1082)
+.|||||||+.+|+|++++.+|++.++| .++||||+||+|++||||||+||.|. +.+++.++.+.|
T Consensus 555 ~vGsGKSSLL~AiLGEm~~~sG~v~v~g-------------siaYv~Q~pWI~ngTvreNILFG~~~-d~~rY~~Vi~aC 620 (1381)
T KOG0054|consen 555 PVGSGKSSLLSAILGEMPKLSGSVAVNG-------------SVAYVPQQPWIQNGTVRENILFGSPY-DEERYDKVIKAC 620 (1381)
T ss_pred CCCCCHHHHHHHHhcCcccccceEEEcC-------------eEEEeccccHhhCCcHHHhhhcCccc-cHHHHHHHHHHc
Confidence 9999999999999999999999999998 49999999999999999999999886 467788888888
Q ss_pred chHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHH-HHHHHHHHHcCCCeEEEEc
Q 001411 321 NAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEL-IVQRALEKIMSNRTTIVVA 399 (1082)
Q Consensus 321 ~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~-~i~~~l~~~~~~~t~i~vt 399 (1082)
++.+|++.||.|+.|.|||+|.+|||||||||+||||+|+|+||++||||+||+|+|+.+ .+.++++++.++||+|+||
T Consensus 621 ~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVT 700 (1381)
T KOG0054|consen 621 ALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVT 700 (1381)
T ss_pred cCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEe
Confidence 899999999999999999999999999999999999999999999999999999999765 6678888888999999999
Q ss_pred cCccccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHhhhccccCC-CCcccCCCCCCCCCC-CCCCCCcccc---
Q 001411 400 HRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQSSEHLSN-PSSICYSGSSRYSSF-RDFPSSRRYD--- 474 (1082)
Q Consensus 400 H~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~--- 474 (1082)
|.+++++.||+|++|+||+|.+.|+++|+++.+..+.++......+...+ +.............. +.........
T Consensus 701 Hql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1381)
T KOG0054|consen 701 HQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEESEQEEEASEKDLESGESSRESESRSLESLSSEEEKS 780 (1381)
T ss_pred CchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccchhhccccccccccccccccchhhhhhhhhccccccc
Confidence 99999999999999999999999999999998888888854333222111 000000000000000 0000000000
Q ss_pred --hhhhhhhhhhhccCCCCCCCchhHHHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhH---
Q 001411 475 --VEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIK--- 549 (1082)
Q Consensus 475 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 549 (1082)
.+....+..+.++ +..+...+.-+..|.+...++....++ +..............+|..+|..+.....
T Consensus 781 ~~~~~~~~~~~~~ee---~~~G~v~~~vY~~Y~~a~~g~~~~~~~---~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~ 854 (1381)
T KOG0054|consen 781 KDEKEEEDKLVQEEE---RETGKVSWSVYKKYIKAAGGFLLVLLI---LLLFVLTQVLQIASNYWLSYWTDDGEDNGTTT 854 (1381)
T ss_pred ccccchhhHHHHHHH---HhcCEeeHHHHHHHHHhcccHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCcccccccC
Confidence 0000000000111 122222222222222222222211111 11111222334456677788865432211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHH
Q 001411 550 RVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSAL 629 (1082)
Q Consensus 550 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~ 629 (1082)
....+|+++|.+++++..++..++.+.+...+.++++.||++|+++++++||+|||. +|+|||+||||+|++.+|..+
T Consensus 855 ~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt--TP~GRILNRFSkD~~~vD~~L 932 (1381)
T KOG0054|consen 855 VSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDT--TPTGRILNRFSKDIDTVDVLL 932 (1381)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCC--CCccchhhhcccchHHHHHhh
Confidence 245679999999999999999999999999999999999999999999999999996 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH----HHHHHHHHHHccHH
Q 001411 630 ADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYS----RATSVAREAIANIR 705 (1082)
Q Consensus 630 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~e~l~g~~ 705 (1082)
|..+..++++++.+++.++++.+..|+. +++++|+.+++++++. |+...+|+++|..+ ...+|+.|++.|+.
T Consensus 933 p~~~~~~~~~~~~~l~~~~vi~~~~P~f---li~~~pl~v~~~~~~~-~Y~~tsReLkRLesitRSPi~sh~~Etl~Gls 1008 (1381)
T KOG0054|consen 933 PFTLEFFLQSLLNVLGILVVISYVTPWF---LIAIIPLGVIYYFVQR-YYLATSRELKRLESITRSPIYSHFSETLQGLS 1008 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhHHH---HHHHHHHHHHHHHHHH-HHHHHhHHHHHhhhcccchHHHhHHHHhcCcc
Confidence 9999999999999999998888887754 5666777766655554 45556899998653 33499999999999
Q ss_pred HHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 001411 706 TVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITA 785 (1082)
Q Consensus 706 tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 785 (1082)
|||||+.+++|.+++....|.++++.+.......|.....+++..+..+.+..+....-... .+.|.+..++.+.....
T Consensus 1009 TIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~-~~~g~vGLslsyal~lt 1087 (1381)
T KOG0054|consen 1009 TIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGL-ISPGLVGLSLSYALQLT 1087 (1381)
T ss_pred eeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC-CCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999988877777776666666555554444433332222 66788888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCC--CcccccccccEEEEeEEEECCCCCCcccccceeEEeeCC
Q 001411 786 LAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPA--SKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAG 863 (1082)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~--~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~G 863 (1082)
..+...+....++++.+.+++|+.+|.+.++|.+.+.+. .++.||.+|.|+|+|++.+|... .++|||||||+|+||
T Consensus 1088 ~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~ 1166 (1381)
T KOG0054|consen 1088 GLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPG 1166 (1381)
T ss_pred HHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCC
Confidence 888888999999999999999999999877662222222 24458999999999999999632 357999999999999
Q ss_pred cEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHH
Q 001411 864 RSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIEL 943 (1082)
Q Consensus 864 e~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei 943 (1082)
||||||||||||||||+++|+|+.+|.+|+|.|||+||+++++++||+++++|||||+||+||+|+|||| ..+++|++|
T Consensus 1167 eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDP-f~e~sD~~I 1245 (1381)
T KOG0054|consen 1167 EKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDP-FDEYSDDEI 1245 (1381)
T ss_pred ceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCc-ccccCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 568999999
Q ss_pred HHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCc
Q 001411 944 MKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGR 1023 (1082)
Q Consensus 944 ~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~ 1023 (1082)
|+||++++++++|+++|+|||++|.|+|.|||.||||++||||||||++|||+||||||++|++||..||++||+.|++|
T Consensus 1246 W~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dc 1325 (1381)
T KOG0054|consen 1246 WEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDC 1325 (1381)
T ss_pred HHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHHHHHhh
Q 001411 1024 TTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQ 1074 (1082)
Q Consensus 1024 TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~~ 1074 (1082)
|||+||||++||.|||||+|||+|+|+|+|+|++|++++++.|++++.+..
T Consensus 1326 TVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~~ 1376 (1381)
T KOG0054|consen 1326 TVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEAA 1376 (1381)
T ss_pred eEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHHH
Confidence 999999999999999999999999999999999999989999987776543
No 3
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3e-159 Score=1549.04 Aligned_cols=1067 Identities=32% Similarity=0.548 Sum_probs=895.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc
Q 001411 2 QTGHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFV 81 (1082)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~ 81 (1082)
+++.++..++.++++++++|+++|.|++++++++|+++++..++.+++++..++.++..++..+.+.|.++|+++||+|+
T Consensus 174 ~~~~~~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~ 253 (1466)
T PTZ00265 174 KFITIFTYASAFLGLYIWSLFKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYC 253 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhc
Confidence 35677888889999999999999999999999999999999999999988888888888999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CCChHHHHHHHHHHHH
Q 001411 82 GEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHG--------DTNGGKAFTTIINVIF 153 (1082)
Q Consensus 82 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~--------~l~~g~~~~~~~~~~~ 153 (1082)
.|+.+.++|.+...+..+...+.....++..++..++.++.+++++|+|++++.+| .+++|.+++++++.+.
T Consensus 254 ~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~ 333 (1466)
T PTZ00265 254 GEKTILKKFNLSEKLYSKYILKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLI 333 (1466)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHH
Confidence 99999999999998888888888888888888888888888999999999999975 5788988887776666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCC-CccccceeEEEeC
Q 001411 154 SGFALGQAAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRP-HMVFENLNFSVDA 232 (1082)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~-~~~l~~i~l~i~~ 232 (1082)
....+..+.+.+..++.+..|++|++++++.+++.+. ...+...+. .+.|+++||+|+|++++ .++|+|+||+|++
T Consensus 334 ~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~--~~~~~~~~~-~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~ 410 (1466)
T PTZ00265 334 SMFMLTIILPNITEYMKSLEATNSLYEIINRKPLVEN--NDDGKKLKD-IKKIQFKNVRFHYDTRKDVEIYKDLNFTLTE 410 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCCCccCCC-CCcEEEEEEEEEcCCCCCCceeccceEEEcC
Confidence 6666777888899999999999999999987654321 111111122 23799999999998643 3599999999999
Q ss_pred CCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEE-CCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCC-----
Q 001411 233 GKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILL-DGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKE----- 306 (1082)
Q Consensus 233 g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~-~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~----- 306 (1082)
||++||+||||||||||+++|+|+|+|++|+|.+ ||+++++++..++|++||||+|+|.||++||+|||.+|.+
T Consensus 411 Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~ 490 (1466)
T PTZ00265 411 GKTYAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDL 490 (1466)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCcccc
Confidence 9999999999999999999999999999999999 5799999999999999999999999999999999999742
Q ss_pred ----------------------------------------------------CCCHHHHHHHHHHhchHHHHhcCCCCcc
Q 001411 307 ----------------------------------------------------DASMDRVIEAAKAANAHSFVEGLPDGYQ 334 (1082)
Q Consensus 307 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~i~~lp~g~~ 334 (1082)
..+++++.++|+.+++++++.++|+||+
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~d 570 (1466)
T PTZ00265 491 EALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYE 570 (1466)
T ss_pred chhccccccccccccccccccccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccC
Confidence 1356789999999999999999999999
Q ss_pred ccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccccCCEEE
Q 001411 335 TQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIM 412 (1082)
Q Consensus 335 t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~~~d~i~ 412 (1082)
|.+|++|.+|||||||||+|||||+++|+|||||||||+||+++++.+++.|.++. +++|+|+||||+++++.||+|+
T Consensus 571 T~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Ii 650 (1466)
T PTZ00265 571 TLVGSNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIF 650 (1466)
T ss_pred ceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999999999999885 4799999999999999999999
Q ss_pred EEeCC-----------------------------------------------EEEEecCchhhhh-cCchhHHHHHhhhc
Q 001411 413 VLKNG-----------------------------------------------QVVESGTHVDLIS-KGGEYAALVNLQSS 444 (1082)
Q Consensus 413 ~l~~G-----------------------------------------------~i~~~g~~~~l~~-~~~~~~~~~~~~~~ 444 (1082)
+|++| +|+|+|+|+||++ .+|.|+.++..|..
T Consensus 651 vl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~ 730 (1466)
T PTZ00265 651 VLSNRERGSTVDVDIIGEDPTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKV 730 (1466)
T ss_pred EEeCCccccccccccccccccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcc
Confidence 99986 5999999999998 69999999977643
Q ss_pred cccCC--C--Cccc--CCCC-CCCC-CC--CCCC----CCcc--c--c-hhhhhhhhhhhccC-C-----C---CCC-Cc
Q 001411 445 EHLSN--P--SSIC--YSGS-SRYS-SF--RDFP----SSRR--Y--D-VEFESSKRRELQSS-D-----Q---SFA-PS 495 (1082)
Q Consensus 445 ~~~~~--~--~~~~--~~~~-~~~~-~~--~~~~----~~~~--~--~-~~~~~~~~~~~~~~-~-----~---~~~-~~ 495 (1082)
..... . .... .... .... .. .... .... . . .........+.... . . ... ..
T Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1466)
T PTZ00265 731 SSKKSSNNDNDKDSDMKSSAYKDSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAP 810 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccc
Confidence 32110 0 0000 0000 0000 00 0000 0000 0 0 00000000000000 0 0 001 11
Q ss_pred hhHHHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 496 PSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHY 575 (1082)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 575 (1082)
..+.++++..+++++.++++++++++.+...|++++.++.++..++.. .........|.+++++++++..++.+++.|
T Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~ 888 (1466)
T PTZ00265 811 NNLRIVYREIFSYKKDVTIIALSILVAGGLYPVFALLYAKYVSTLFDF--ANLEANSNKYSLYILVIAIAMFISETLKNY 888 (1466)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 133444555555666677788888888999999999999998876632 112223446777788888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 576 FYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSW 655 (1082)
Q Consensus 576 ~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 655 (1082)
+..+++.++..++|.++|++++++|++|||.+++++|++++|+++|++.++..+...+..++..++.++++++++++++|
T Consensus 889 ~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~ 968 (1466)
T PTZ00265 889 YNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCP 968 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999977799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHH--H-------------HHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHH
Q 001411 656 RLAAVVAASLPLLIGAFVAEQLFLKGFGG--D-------------YNRAYSRATSVAREAIANIRTVAAYGIEKRISIQF 720 (1082)
Q Consensus 656 ~l~~~~l~~~p~~~~~~~~~~~~~~~~~~--~-------------~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~ 720 (1082)
.+++++++++|++...+....+....... . .++...+....+.|++.|+++||+|+.|+++.++|
T Consensus 969 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~ 1048 (1466)
T PTZ00265 969 IVAAVLTGTYFIFMRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLI 1048 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHH
Confidence 99887765555544333222121111000 0 12235566789999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 721 ASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVK 800 (1082)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1082)
.+..+...+...+.....++.+++.+.+.++..++.+|+|..++..|.+++|++++++.+..+...++..+...++++.+
T Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 1128 (1466)
T PTZ00265 1049 EKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSEN 1128 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888889999999999999999999999999999999999999998877766666677888899999999
Q ss_pred HHHHHHHHHHhhcccccCCCCCCCCcc---cccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHH
Q 001411 801 GSQALGPVFGILYRKTAIQPDDPASKE---VTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKS 877 (1082)
Q Consensus 801 ~~~a~~ri~~~~~~~~~~~~~~~~~~~---~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKS 877 (1082)
+..+.+|++++++.+++.+..+..... ++...|.|+|+||+|+||++++.+||+|+||+|+|||++||||+||||||
T Consensus 1129 a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKS 1208 (1466)
T PTZ00265 1129 AKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKS 1208 (1466)
T ss_pred HHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHH
Confidence 999999999999876543221111111 12346789999999999876667899999999999999999999999999
Q ss_pred HHHHHHhccccC------------------------------------------------------CccEEEECCccCCC
Q 001411 878 TVISLVMRFYDP------------------------------------------------------ISGTVLIDGYDIRT 903 (1082)
Q Consensus 878 TL~~lL~rl~~p------------------------------------------------------~~G~I~idG~di~~ 903 (1082)
||+++|+|||+| ++|+|+|||+||++
T Consensus 1209 Tl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~ 1288 (1466)
T PTZ00265 1209 TVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICD 1288 (1466)
T ss_pred HHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHh
Confidence 999999999999 69999999999999
Q ss_pred CCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHH
Q 001411 904 LNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 983 (1082)
Q Consensus 904 i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 983 (1082)
+++++||++|+||||||+||+|||||||.+|.++++|+|+++|++.|++++||.+||+||||.|||+|.+||||||||||
T Consensus 1289 ~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIa 1368 (1466)
T PTZ00265 1289 YNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIA 1368 (1466)
T ss_pred CCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHH
Confidence 99999999999999999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhccCEEEEEeC----CEE-EEecChH
Q 001411 984 IARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRNADKIAVLQQ----GKV-AEIGSHE 1056 (1082)
Q Consensus 984 LARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~----G~i-ve~G~~~ 1056 (1082)
|||||+|+|+|||||||||+||++||+.|+++|++.. +++|+|+||||++++++||+|+||++ |++ +|+|+|+
T Consensus 1369 IARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~ 1448 (1466)
T PTZ00265 1369 IARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHE 1448 (1466)
T ss_pred HHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHH
Confidence 9999999999999999999999999999999999874 68999999999999999999999999 995 5999999
Q ss_pred HHhhhccchHHHHHHHh
Q 001411 1057 QLLRKENGIYKQLIRLQ 1073 (1082)
Q Consensus 1057 eLl~~~~g~f~~l~~~~ 1073 (1082)
||+++++|.|++||+.|
T Consensus 1449 eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1449 ELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred HHHhcCCChHHHHHhhc
Confidence 99975589999999876
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.2e-155 Score=1526.77 Aligned_cols=1002 Identities=21% Similarity=0.282 Sum_probs=773.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 37 LIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTY 116 (1082)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1082)
+++++..++.+++++..++.++..+++.+.+.|.++||++||+|+||+.+.+++.+.++++.+..++.....++...+..
T Consensus 452 l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~ 531 (1622)
T PLN03130 452 LMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILN 531 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566778888888889999999999999999999999999999999999999999988887777666555443332
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 001411 117 GLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDG 196 (1082)
Q Consensus 117 ~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~ 196 (1082)
... ..+.++++|+|++.+|.+|+|.+|+++..+.....|+..++..+..+.+++++++||.++++.++....+ ..
T Consensus 532 ~~~--~~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~-~~-- 606 (1622)
T PLN03130 532 SIP--VLVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLP-NP-- 606 (1622)
T ss_pred HHH--HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccc-CC--
Confidence 222 1345567899999999999999998877666667888899999999999999999999999654321111 00
Q ss_pred CCCCCCCCcEEEEEEEEECCCC-CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCC-cEEEECCeeCCCC
Q 001411 197 ITLPKLAGQIEFSEVCFAYPSR-PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTS-GKILLDGHDLKSL 274 (1082)
Q Consensus 197 ~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~-G~i~~~g~~~~~~ 274 (1082)
......+.|+++|++|+|+++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++ |+|.+.
T Consensus 607 -~~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~------- 678 (1622)
T PLN03130 607 -PLEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIR------- 678 (1622)
T ss_pred -cccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEc-------
Confidence 001112469999999999753 2459999999999999999999999999999999999999999 999864
Q ss_pred CHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 001411 275 QLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 354 (1082)
Q Consensus 275 ~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~l 354 (1082)
++|+||+|+||||++||||||+||.|. +++++.++++.|+++++++.||+|++|.+||+|.+|||||||||+|
T Consensus 679 ------~~Iayv~Q~p~LfngTIreNI~fg~~~-d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaL 751 (1622)
T PLN03130 679 ------GTVAYVPQVSWIFNATVRDNILFGSPF-DPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSM 751 (1622)
T ss_pred ------CeEEEEcCccccCCCCHHHHHhCCCcc-cHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHH
Confidence 579999999999999999999999885 6889999999999999999999999999999999999999999999
Q ss_pred HHhcccCCCeeEEeCcccCCCHHHHHHH-HHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhcCc
Q 001411 355 ARAVLRNPKILLLDEATSALDAESELIV-QRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGG 433 (1082)
Q Consensus 355 ARal~~~~~illlDEpts~LD~~~~~~i-~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 433 (1082)
|||+|++|+||||||||||||+++++.+ .+++.+..+++|+|+|||+++.++.||+|++|++|+++++|+|+|++++++
T Consensus 752 ARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~ 831 (1622)
T PLN03130 752 ARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGP 831 (1622)
T ss_pred HHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcch
Confidence 9999999999999999999999998876 466777778899999999999999999999999999999999999999888
Q ss_pred hhHHHHHhhhccccCCCCcccCC-CCCCCCCCCC--CCC-Ccccc-hhhh---hhhhhhhccCCCCCCCchhHHHHHHHh
Q 001411 434 EYAALVNLQSSEHLSNPSSICYS-GSSRYSSFRD--FPS-SRRYD-VEFE---SSKRRELQSSDQSFAPSPSIWELLKLN 505 (1082)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~-~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (1082)
.|.+++..+.............. .......... ... ..... .... .....+.++.+........++++++..
T Consensus 832 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~ 911 (1622)
T PLN03130 832 LFQKLMENAGKMEEYVEENGEEEDDQTSSKPVANGNANNLKKDSSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNAL 911 (1622)
T ss_pred hHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccchhhhhHHHHhcCccCHHHHHHHHHHh
Confidence 89888765432111000000000 0000000000 000 00000 0000 000000011111111111122222211
Q ss_pred cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 506 AAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLT 585 (1082)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 585 (1082)
+.+..+.+.+++.++ ...+ ..+...|..+|.............|+++|++++++..++.+++.+++.+.+.+++
T Consensus 912 -g~~~~~~~~~~~~~~----~~~~-~~~~~~wl~~w~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~ 985 (1622)
T PLN03130 912 -GGAWVVMILFLCYVL----TEVF-RVSSSTWLSEWTDQGTPKTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAA 985 (1622)
T ss_pred -ccHHHHHHHHHHHHH----HHHH-HHHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111111111 1111 1234455555543211111223457778888999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 586 ARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASL 665 (1082)
Q Consensus 586 ~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 665 (1082)
.++|.+++++++++|++|||. +|+|+++|||++|++.+|..++..+..++..++.+++.++++++.+|.. +++++
T Consensus 986 ~~L~~~l~~~ll~~p~~ffd~--~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~---~~~~~ 1060 (1622)
T PLN03130 986 KRLHDAMLGSILRAPMSFFHT--NPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTIS---LWAIM 1060 (1622)
T ss_pred HHHHHHHHHHHHcCCHHHhcc--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH
Confidence 999999999999999999985 8999999999999999999999999999999998888888887777632 33445
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHH----HHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 001411 666 PLLIGAFVAEQLFLKGFGGDYNRAY----SRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFG 741 (1082)
Q Consensus 666 p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1082)
|+.++++++.. +..+..++.++.. +...+++.|+++|+.|||+|+++++|.+++.+..+...+..+.......|.
T Consensus 1061 pl~~~~~~~~~-~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl 1139 (1622)
T PLN03130 1061 PLLVLFYGAYL-YYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWL 1139 (1622)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444333333 3334445555433 445689999999999999999999999999988888887766655555454
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC-CC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 001411 742 YGVSQLLSLCSYALGLWYASVLIKQKG-SN-----FGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRK 815 (1082)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~ 815 (1082)
.....++..+ +..+.+...+..+. .. .+.+...+.+.......+......+..++..+.+++|+.++++.+
T Consensus 1140 ~~~l~~~~~~---~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~ 1216 (1622)
T PLN03130 1140 AIRLETLGGL---MIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLP 1216 (1622)
T ss_pred HHHHHHHHHH---HHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3333332221 22222222233221 11 122222233333444555666667778899999999999998766
Q ss_pred ccCCCCCC--CCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccE
Q 001411 816 TAIQPDDP--ASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGT 893 (1082)
Q Consensus 816 ~~~~~~~~--~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~ 893 (1082)
+|.+...+ ...+.||.+|.|+|+||+|+|+++ .++||+|+||+|+||||||||||||||||||+++|+|+|+|++|+
T Consensus 1217 ~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~ 1295 (1622)
T PLN03130 1217 SEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGR 1295 (1622)
T ss_pred CcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCce
Confidence 55432111 112235778999999999999632 347999999999999999999999999999999999999999999
Q ss_pred EEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCC
Q 001411 894 VLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQ 973 (1082)
Q Consensus 894 I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~ 973 (1082)
|+|||+||+++++++||++|++|||||+||+||||+||+|+. +++|+|+|+||++++++++|.++|+||||+|||+|.+
T Consensus 1296 I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~n 1374 (1622)
T PLN03130 1296 ILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGEN 1374 (1622)
T ss_pred EEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCC
Confidence 999999999999999999999999999999999999999975 6899999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEec
Q 001411 974 LSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 974 LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G 1053 (1082)
|||||||||||||||||+|+|||||||||+||.+||+.||++|++.+++||+|+||||++|+.+||||+|||+|+|+|+|
T Consensus 1375 LSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~G 1454 (1622)
T PLN03130 1375 FSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFD 1454 (1622)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHhhhccchHHHHHHHhhc
Q 001411 1054 SHEQLLRKENGIYKQLIRLQQD 1075 (1082)
Q Consensus 1054 ~~~eLl~~~~g~f~~l~~~~~~ 1075 (1082)
+|+||+++++|.|++|++.+..
T Consensus 1455 t~~eLl~~~~g~f~~L~~~~~~ 1476 (1622)
T PLN03130 1455 TPENLLSNEGSAFSKMVQSTGA 1476 (1622)
T ss_pred CHHHHHhCCCCHHHHHHHHcCh
Confidence 9999998668999999987654
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.9e-154 Score=1514.77 Aligned_cols=999 Identities=20% Similarity=0.273 Sum_probs=771.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 41 AGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLF 120 (1082)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (1082)
+..++.+++++..++.++..+++.+.+.|.++||++||+|+||+.+.+++++.++++.+...+.....++...+.....
T Consensus 456 l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~- 534 (1495)
T PLN03232 456 LQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIP- 534 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 4556778888888999999999999999999999999999999999999999999998888877766655433322222
Q ss_pred HHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCC
Q 001411 121 CAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLP 200 (1082)
Q Consensus 121 ~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~ 200 (1082)
..+.++++|++++.+|.+|+|.+|+++..+.....|+..++..+..+.++++|++|+.++++.+++.... .. ...
T Consensus 535 -~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~-~~---~~~ 609 (1495)
T PLN03232 535 -VVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQ-NP---PLQ 609 (1495)
T ss_pred -HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccc-cC---CcC
Confidence 2233467899999999999999999877666667888899999999999999999999999755432111 00 011
Q ss_pred CCCCcEEEEEEEEECCCC-CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHH
Q 001411 201 KLAGQIEFSEVCFAYPSR-PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL 279 (1082)
Q Consensus 201 ~~~~~i~~~~v~~~y~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~ 279 (1082)
...+.|+++|++|+|+++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|.+. .+
T Consensus 610 ~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~------------~~ 677 (1495)
T PLN03232 610 PGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV------------VI 677 (1495)
T ss_pred CCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE------------Ee
Confidence 123469999999999753 34599999999999999999999999999999999999999998763 24
Q ss_pred hhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcc
Q 001411 280 REQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVL 359 (1082)
Q Consensus 280 ~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~ 359 (1082)
|++|+||+|+||||++||||||+||.+ .+++++.++++.|+++++++.||+||+|.+||+|.+|||||||||+||||+|
T Consensus 678 ~~~Iayv~Q~p~Lf~gTIreNI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly 756 (1495)
T PLN03232 678 RGSVAYVPQVSWIFNATVRENILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVY 756 (1495)
T ss_pred cCcEEEEcCccccccccHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHh
Confidence 678999999999999999999999986 5788999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeEEeCcccCCCHHHHHHHH-HHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhcCchhHHH
Q 001411 360 RNPKILLLDEATSALDAESELIVQ-RALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAAL 438 (1082)
Q Consensus 360 ~~~~illlDEpts~LD~~~~~~i~-~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 438 (1082)
++|+|+||||||||||+++++.+. +++....+++|+|+||||++.++.||+|++|++|+++++|+|+|++++++.|.++
T Consensus 757 ~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l 836 (1495)
T PLN03232 757 SNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKL 836 (1495)
T ss_pred cCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHH
Confidence 999999999999999999998775 4566667889999999999999999999999999999999999999999999988
Q ss_pred HHhhhccccCCCCcc-cCCCCC-CCCCCCCCCCCcccchhhhh--h-hhhhhccCCCCCCCchhHHHHHHHhcchhH-HH
Q 001411 439 VNLQSSEHLSNPSSI-CYSGSS-RYSSFRDFPSSRRYDVEFES--S-KRRELQSSDQSFAPSPSIWELLKLNAAEWP-YA 512 (1082)
Q Consensus 439 ~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 512 (1082)
+..+........... ...... ......+............. . ...++++ +..+...+..+..+.+...+ ++
T Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~---~~~g~v~~~vy~~y~~~~~~~~~ 913 (1495)
T PLN03232 837 MENAGKMDATQEVNTNDENILKLGPTVTIDVSERNLGSTKQGKRGRSVLVKQEE---RETGIISWNVLMRYNKAVGGLWV 913 (1495)
T ss_pred HHhcccccccccccccccccccccccccccccccccccccccccchhhhhhHHH---HhcCcccHHHHHHHHHHcCcHHH
Confidence 765432111100000 000000 00000000000000000000 0 0000011 11122222222222222111 11
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 513 VLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSM 592 (1082)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 592 (1082)
...++...+ ....+ ..+..+|..+|.............|+++|++++++..++.+++.+++.+.+.+++.++|.++
T Consensus 914 ~~~~~~~~~---~~~~~-~~~~~~wl~~w~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l 989 (1495)
T PLN03232 914 VMILLVCYL---TTEVL-RVSSSTWLSIWTDQSTPKSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAM 989 (1495)
T ss_pred HHHHHHHHH---HHHHH-HHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 11111 22455666666542211111235688899999999999999999999999999999999999
Q ss_pred HHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 593 FSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAF 672 (1082)
Q Consensus 593 ~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~ 672 (1082)
+++++++|++|||. +++|+++|||++|++.+|..++..+..++..++.++++++++++.++.. +++++|+.+.++
T Consensus 990 ~~~ll~~p~~ff~~--~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~---~~~~~~~~~~~~ 1064 (1495)
T PLN03232 990 LNSILRAPMLFFHT--NPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVSTIS---LWAIMPLLILFY 1064 (1495)
T ss_pred HHHHHcCCeeeeCc--CCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 99999999999985 8999999999999999999999999999888888888777776666432 333445444433
Q ss_pred HHHHHHHhhHHHHHHHH----HHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 001411 673 VAEQLFLKGFGGDYNRA----YSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLL 748 (1082)
Q Consensus 673 ~~~~~~~~~~~~~~~~~----~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1082)
+...+ ..+..++.++. .+...+++.|+++|+.|||+||.+++|.+++.+..+...+..+.......|.......+
T Consensus 1065 ~~~~~-~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~ 1143 (1495)
T PLN03232 1065 AAYLY-YQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETL 1143 (1495)
T ss_pred HHHHH-HHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33332 33334444443 34556899999999999999999999999999888888877665544444433222222
Q ss_pred HHHHHHHHHHHHHHHHH-hCCC----CHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCC
Q 001411 749 SLCSYALGLWYASVLIK-QKGS----NFGD-IMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDD 822 (1082)
Q Consensus 749 ~~~~~~~~~~~~~~l~~-~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~ 822 (1082)
..++..+.+...+. .+.+ .+.. +..++.+......++......+..++.++.+++|+.++++.+++.+...
T Consensus 1144 ---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~ 1220 (1495)
T PLN03232 1144 ---GGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAII 1220 (1495)
T ss_pred ---HHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 12222222333333 2221 1111 1122333334445666777788899999999999999997765543211
Q ss_pred CC--CcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcc
Q 001411 823 PA--SKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYD 900 (1082)
Q Consensus 823 ~~--~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~d 900 (1082)
.. ..+.||.+|.|+|+||+|+|+++ .++||+|+||+|+||||||||||||||||||+++|+|+|+|++|+|.|||+|
T Consensus 1221 ~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~d 1299 (1495)
T PLN03232 1221 ENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCD 1299 (1495)
T ss_pred cCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEE
Confidence 11 12235678899999999999632 3579999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 901 IRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 901 i~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
|+++++++||++|++|||||+||+|||||||+|+. +++|+|+|+|+++++++++|+++|+||||+|||+|.+|||||||
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQ 1378 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQ 1378 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHH
Confidence 99999999999999999999999999999999964 78999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhh
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
||||||||+|+|+|||||||||+||++||+.||++|++.+++||+|+||||++|+.+||||+|||+|+|+|+|+|+||++
T Consensus 1379 rlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~ 1458 (1495)
T PLN03232 1379 LLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLS 1458 (1495)
T ss_pred HHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hccchHHHHHHHhhcc
Q 001411 1061 KENGIYKQLIRLQQDK 1076 (1082)
Q Consensus 1061 ~~~g~f~~l~~~~~~~ 1076 (1082)
+++|.|++|++.+...
T Consensus 1459 ~~~~~f~~l~~~~~~~ 1474 (1495)
T PLN03232 1459 RDTSAFFRMVHSTGPA 1474 (1495)
T ss_pred CCCCHHHHHHHHhChh
Confidence 6667999999887643
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.3e-149 Score=1476.82 Aligned_cols=1011 Identities=21% Similarity=0.292 Sum_probs=789.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 29 LLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGVAK 108 (1082)
Q Consensus 29 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (1082)
++.++++++++++..++.+.+++..++.++..+++.+.+.|.++||++||+++||+.+.+++++.++++.+..++.....
T Consensus 461 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~ 540 (1522)
T TIGR00957 461 LAGVAVMVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLH 540 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556666677778888999999999999999999999999999999999999999999999999988877766665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 001411 109 GIGVGLTYGLLFCAWALLLWYAGILVRH--GDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKENS 186 (1082)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~--~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~ 186 (1082)
.+......... ..+.++.++.|.+.. +.++++.+|+.+..+.....|+..++..+..+.++++|++||.++++.++
T Consensus 541 ~~~~~~~~~~~--~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~ 618 (1522)
T TIGR00957 541 AVGTFTWVCTP--FLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEE 618 (1522)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 44332222111 122233456676663 56899999888755555667899999999999999999999999997543
Q ss_pred CCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEE
Q 001411 187 HSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILL 266 (1082)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~ 266 (1082)
+.+ .........+...+.|+++|++|+|++..+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+
T Consensus 619 ~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~ 697 (1522)
T TIGR00957 619 LEP-DSIERRTIKPGEGNSITVHNATFTWARDLPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHM 697 (1522)
T ss_pred ccc-ccccccccCCCCCCcEEEEEeEEEcCCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEE
Confidence 321 1000000001112369999999999754456999999999999999999999999999999999999999999999
Q ss_pred CCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCCh
Q 001411 267 DGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSG 346 (1082)
Q Consensus 267 ~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSg 346 (1082)
+| +|+||+|+||+|++||+|||.+|.+. +.+++.++++.+++.+++..+|+|++|.+|++|.+|||
T Consensus 698 ~g-------------~i~yv~Q~~~l~~~Ti~eNI~~g~~~-~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSG 763 (1522)
T TIGR00957 698 KG-------------SVAYVPQQAWIQNDSLRENILFGKAL-NEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSG 763 (1522)
T ss_pred CC-------------EEEEEcCCccccCCcHHHHhhcCCcc-CHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCH
Confidence 87 49999999999999999999999764 45677788888888999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHH---HcCCCeEEEEccCccccccCCEEEEEeCCEEEEec
Q 001411 347 GQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEK---IMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESG 423 (1082)
Q Consensus 347 Gqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~---~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g 423 (1082)
||||||+||||+|++|+|+|||||||+||+++++.+.+.+.+ +.+++|+|+|||+++.++.||+|++|++|++++.|
T Consensus 764 GQkqRiaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g 843 (1522)
T TIGR00957 764 GQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMG 843 (1522)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeC
Confidence 999999999999999999999999999999999999988853 45689999999999999999999999999999999
Q ss_pred CchhhhhcCchhHHHHHhhhccccCC--CCc------ccCCCC---CC--------CCCCCC----CCCC--c--cc--c
Q 001411 424 THVDLISKGGEYAALVNLQSSEHLSN--PSS------ICYSGS---SR--------YSSFRD----FPSS--R--RY--D 474 (1082)
Q Consensus 424 ~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~---~~--------~~~~~~----~~~~--~--~~--~ 474 (1082)
+++++.++++.|.++...+..+...+ ... ...... .. .....+ .... . .. .
T Consensus 844 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (1522)
T TIGR00957 844 SYQELLQRDGAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGS 923 (1522)
T ss_pred CHHHHHhcchhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccc
Confidence 99999998888888876432211100 000 000000 00 000000 0000 0 00 0
Q ss_pred h-hhhhhhh----hhhccCCCCCCCchhHHHHHHHhcc-hhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCch--
Q 001411 475 V-EFESSKR----RELQSSDQSFAPSPSIWELLKLNAA-EWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDS-- 546 (1082)
Q Consensus 475 ~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 546 (1082)
. ....... ......+.+..+...+..+..+.+. ++...++.++...+ ......+..+|..+|.....
T Consensus 924 ~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~l~~w~~~~~~~ 998 (1522)
T TIGR00957 924 SAELQKAEAKEETWKLMEADKAQTGQVELSVYWDYMKAIGLFITFLSIFLFVC-----NHVSALASNYWLSLWTDDPMVN 998 (1522)
T ss_pred cccccccccccchhhhHHHHHHhcCcccHHHHHHHHHHcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcccccc
Confidence 0 0000000 0000000011111111111111111 11111111111111 11122334555555643211
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHH
Q 001411 547 QIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVR 626 (1082)
Q Consensus 547 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~ 626 (1082)
........|.++|++++++..++.++..++..+.+.+++.++|.+++++++++|++|||. +++|+++|||++|++.+|
T Consensus 999 ~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnR~s~Di~~id 1076 (1522)
T TIGR00957 999 GTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFER--TPSGNLVNRFSKELDTVD 1076 (1522)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhcc--CChHHHHHHHHHHHHHHH
Confidence 011112356678888888888888888889999999999999999999999999999985 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH----HHHHHHHHHHHHc
Q 001411 627 SALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRA----YSRATSVAREAIA 702 (1082)
Q Consensus 627 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~e~l~ 702 (1082)
..++..+..++..++.+++.++++++.+|++++++ +|+++++++ .++++.+..++.++. .+...+++.|+++
T Consensus 1077 ~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~ 1152 (1522)
T TIGR00957 1077 SMIPPVIKMFMGSLFNVIGALIVILLATPIAAVII---PPLGLLYFF-VQRFYVASSRQLKRLESVSRSPVYSHFNETLL 1152 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhC
Confidence 99999999999999999988888888777654333 333333333 334443444555543 3455699999999
Q ss_pred cHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHH
Q 001411 703 NIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIK-QKGSNFGDIMKSFMVL 781 (1082)
Q Consensus 703 g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~ 781 (1082)
|+.|||+||++++|.+++.+..+..++..+.....+.|.....+++..+ +.++++...+. .+.++.|.+..++.+.
T Consensus 1153 Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~g~l~~~l~~~ 1229 (1522)
T TIGR00957 1153 GVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVGNC---IVLFAALFAVISRHSLSAGLVGLSVSYS 1229 (1522)
T ss_pred CcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999888777777766555554332 33334444443 5778999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCC--CCCCcccccccccEEEEeEEEECCCCCCcccccceeEE
Q 001411 782 IITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPD--DPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLK 859 (1082)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~--~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~ 859 (1082)
.....++..+...+..+++++.+++|+.++++.+++.+.. ....++.||.+|.|+|+||+|+|+++ .++||+||||+
T Consensus 1230 ~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~ 1308 (1522)
T TIGR00957 1230 LQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVT 1308 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEE
Confidence 8888899999999999999999999999999766543211 11112235778999999999999743 24799999999
Q ss_pred eeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCC
Q 001411 860 VSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDAS 939 (1082)
Q Consensus 860 I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~ 939 (1082)
|+||||||||||||||||||+++|+|+|+|++|+|.|||+||+++++++||++|++|||||+||+||||+||+|. ++++
T Consensus 1309 I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~-~~~s 1387 (1522)
T TIGR00957 1309 IHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPF-SQYS 1387 (1522)
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcc-cCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999985 4799
Q ss_pred HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHh
Q 001411 940 EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKL 1019 (1082)
Q Consensus 940 d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~ 1019 (1082)
|+|+|+|+++++++++|.++|+||||+|||+|.+|||||||||||||||||+|+|||||||||+||++||+.||++|++.
T Consensus 1388 deei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~ 1467 (1522)
T TIGR00957 1388 DEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQ 1467 (1522)
T ss_pred HHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHHHHHh
Q 001411 1020 MEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQ 1073 (1082)
Q Consensus 1020 ~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~ 1073 (1082)
+++||||+||||++++.+||||+|||+|+|+|+|+|+||+++ +|.|++|++..
T Consensus 1468 ~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1468 FEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKDA 1520 (1522)
T ss_pred cCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHHc
Confidence 999999999999999999999999999999999999999984 79999999864
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=4.6e-144 Score=1418.47 Aligned_cols=1033 Identities=19% Similarity=0.253 Sum_probs=791.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHH
Q 001411 10 LSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIES 89 (1082)
Q Consensus 10 ~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~ 89 (1082)
.+.+++++++++.+..+.+++.++++++++.+..++.+++.+..++.++..+++.+.++|.++|||+||+++||+.+.++
T Consensus 371 Pl~li~~~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~r 450 (1560)
T PTZ00243 371 PMVLLLSILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVAN 450 (1560)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444667777777777778888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 90 YSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIA 169 (1082)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~ 169 (1082)
+++.++++.+..++......+...+......+.. ++.+++|.+.++.+|++.+|+++..+.....|+..++..+..+.
T Consensus 451 i~~~R~~El~~l~~~~~~~~~~~~~~~~~p~l~~--~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~ 528 (1560)
T PTZ00243 451 IEDKRARELRYLRDVQLARVATSFVNNATPTLMI--AVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVL 528 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988877777665554444333332 23467788889999999999998777777789999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCC----CC-C-------CCC--C---------------CC----------------------
Q 001411 170 KGKAAAANIISIIKENSHSS----ER-P-------GDD--G---------------IT---------------------- 198 (1082)
Q Consensus 170 ~~~~a~~ri~~~l~~~~~~~----~~-~-------~~~--~---------------~~---------------------- 198 (1082)
++.+|++||.+||+.++... +. . ... . ..
T Consensus 529 ~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (1560)
T PTZ00243 529 QFLVSIKRISTFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCE 608 (1560)
T ss_pred HHHHHHHHHHHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhcccc
Confidence 99999999999996543100 00 0 000 0 00
Q ss_pred -----CCCCCCcEEEEEEEEECCC--------------------------------------CCCccccceeEEEeCCCE
Q 001411 199 -----LPKLAGQIEFSEVCFAYPS--------------------------------------RPHMVFENLNFSVDAGKT 235 (1082)
Q Consensus 199 -----~~~~~~~i~~~~v~~~y~~--------------------------------------~~~~~l~~i~l~i~~g~~ 235 (1082)
.....+.+.++|++|.++. .++++|+|+||+|++|++
T Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~ 688 (1560)
T PTZ00243 609 QCRPTKRHPSPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKL 688 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCE
Confidence 0001124677777776431 123489999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHH
Q 001411 236 FAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIE 315 (1082)
Q Consensus 236 ~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~ 315 (1082)
++|+||||||||||+++|+|+++|++|+|.++ ++|+||+|+||+|++||+|||.++.+. +.+++.+
T Consensus 689 ~~IiG~nGsGKSTLL~~i~G~~~~~~G~i~~~-------------~~i~yv~Q~~~l~~~Tv~enI~~~~~~-~~~~~~~ 754 (1560)
T PTZ00243 689 TVVLGATGSGKSTLLQSLLSQFEISEGRVWAE-------------RSIAYVPQQAWIMNATVRGNILFFDEE-DAARLAD 754 (1560)
T ss_pred EEEECCCCCcHHHHHHHHhcCCCCCCcEEEEC-------------CeEEEEeCCCccCCCcHHHHHHcCChh-hHHHHHH
Confidence 99999999999999999999999999999864 469999999999999999999998653 4556777
Q ss_pred HHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHH-HHHHHcCCCe
Q 001411 316 AAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQR-ALEKIMSNRT 394 (1082)
Q Consensus 316 ~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~-~l~~~~~~~t 394 (1082)
+++.++++++++.+|+|++|.+|++|.+|||||||||+||||||++|+|+|||||||+||+++++.+.+ ++....+++|
T Consensus 755 ~~~~~~l~~~l~~l~~g~~t~i~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~T 834 (1560)
T PTZ00243 755 AVRVSQLEADLAQLGGGLETEIGEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKT 834 (1560)
T ss_pred HHHHhhhHHHHHHhhccchHHhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCE
Confidence 888888999999999999999999999999999999999999999999999999999999998877765 4544556899
Q ss_pred EEEEccCccccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHhhhccccCCCC-cccC--CCCCCCC---CCCC-C
Q 001411 395 TIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQSSEHLSNPS-SICY--SGSSRYS---SFRD-F 467 (1082)
Q Consensus 395 ~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~---~~~~-~ 467 (1082)
+|+|||+++.++.||+|++|++|++++.|+++++++. +.|..+............. ...+ ....... .... .
T Consensus 835 vIlvTH~~~~~~~ad~ii~l~~G~i~~~G~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1560)
T PTZ00243 835 RVLATHQVHVVPRADYVVALGDGRVEFSGSSADFMRT-SLYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPV 913 (1560)
T ss_pred EEEEeCCHHHHHhCCEEEEEECCEEEEecCHHHHHhC-hHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999875 4576665432211100000 0000 0000000 0000 0
Q ss_pred CCCcccchhhh--h-----hhhhhhccCCCCCCCchhHHHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Q 001411 468 PSSRRYDVEFE--S-----SKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAF 540 (1082)
Q Consensus 468 ~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (1082)
........... . ....+.++......+...+++++.... .+.+..+. +..+ ...-....+..+|..+
T Consensus 914 ~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~Y~~~~g-~~~~~~~~-l~~~----~~~~~~~~~~~~wl~~ 987 (1560)
T PTZ00243 914 AKQEGNAEGGDGAALDAAAGRLMTREEKASGSVPWSTYVAYLRFCG-GLHAAGFV-LATF----AVTELVTVSSGVWLSM 987 (1560)
T ss_pred cccccccccccccccccccchhhhHHHHhcCcccHHHHHHHHHHhh-hHHHHHHH-HHHH----HHHHHHHHHHHHHHHH
Confidence 00000000000 0 000000000011111111222222111 11111100 0000 0111112334455666
Q ss_pred cCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHh
Q 001411 541 YSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAA 620 (1082)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~ 620 (1082)
|..... ......|+.+|+++.++..++.+++.+.....+.+.+.++|.+++++++++|++|||. +++|+++|||++
T Consensus 988 w~~~~~--~~~~~~~l~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~--~~~G~ilnR~s~ 1063 (1560)
T PTZ00243 988 WSTRSF--KLSAATYLYVYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDT--TPLGRILNRFSR 1063 (1560)
T ss_pred hccccc--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccC--CCccHHHHHHHh
Confidence 654221 1122356777887777777777777777777788889999999999999999999985 899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH----HHHHHHHH
Q 001411 621 DATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNR----AYSRATSV 696 (1082)
Q Consensus 621 D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 696 (1082)
|++.+|..++..+..++..++.+++.++++++.+|.+ +++++|+.++++.+.. +..+..++.++ ..++..++
T Consensus 1064 Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~---~~~~i~~~~~~~~i~~-~~~~~~r~~~r~~~~~~s~l~s~ 1139 (1560)
T PTZ00243 1064 DIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFV---LVALVPCGYLYYRLMQ-FYNSANREIRRIKSVAKSPVFTL 1139 (1560)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhcHHHHH
Confidence 9999999999999999999999998888888887743 3344454444433333 33334455554 34556799
Q ss_pred HHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCCHHHH
Q 001411 697 AREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIK--QKGSNFGDI 774 (1082)
Q Consensus 697 ~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~ 774 (1082)
+.|++.|+.|||+||.++.+.+++.+.++.+.+..+.......|......++..+...+..+++..... .+..+.|.+
T Consensus 1140 ~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l 1219 (1560)
T PTZ00243 1140 LEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLV 1219 (1560)
T ss_pred HHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHH
Confidence 999999999999999999999999999999999888877777777776666665555444445444332 344677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCC-CC------------------------CCCCc---
Q 001411 775 MKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQ-PD------------------------DPASK--- 826 (1082)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~-~~------------------------~~~~~--- 826 (1082)
..++.+......++..+...+..++..+.+++|+.++++..++++ +. ++...
T Consensus 1220 ~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1299 (1560)
T PTZ00243 1220 SLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSA 1299 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCccc
Confidence 667777777778888889999999999999999999986433221 00 00000
Q ss_pred -ccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCC
Q 001411 827 -EVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN 905 (1082)
Q Consensus 827 -~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~ 905 (1082)
+.++..|.|+|+||+|+|++. .++||+||||+|+||||||||||||||||||+++|+|+|+|++|+|+|||+||++++
T Consensus 1300 ~~~~~~~G~I~f~nVsf~Y~~~-~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~ 1378 (1560)
T PTZ00243 1300 APHPVQAGSLVFEGVQMRYREG-LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYG 1378 (1560)
T ss_pred CCCCCCCCeEEEEEEEEEeCCC-CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCC
Confidence 112356889999999999742 346999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHH
Q 001411 906 LRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 985 (1082)
Q Consensus 906 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLA 985 (1082)
+++||++|+||||||+||+||||+||+|+ ++++|+|+|+|+++++++++|.++|+||||.|||+|.|||||||||||||
T Consensus 1379 l~~LR~~I~iVpQdp~LF~gTIreNIdp~-~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLA 1457 (1560)
T PTZ00243 1379 LRELRRQFSMIPQDPVLFDGTVRQNVDPF-LEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMA 1457 (1560)
T ss_pred HHHHHhcceEECCCCccccccHHHHhCcc-cCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHH
Confidence 99999999999999999999999999995 57899999999999999999999999999999999999999999999999
Q ss_pred HHHccC-CCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccc
Q 001411 986 RAILKN-PSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENG 1064 (1082)
Q Consensus 986 RAlL~~-~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g 1064 (1082)
||||++ |+|||||||||+||++||+.|+++|++.+++||+|+||||++++.+||+|+||++|+|+|+|+|+||+++++|
T Consensus 1458 RALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~ 1537 (1560)
T PTZ00243 1458 RALLKKGSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQS 1537 (1560)
T ss_pred HHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCC
Confidence 999996 8999999999999999999999999999999999999999999999999999999999999999999986789
Q ss_pred hHHHHHHHhhc
Q 001411 1065 IYKQLIRLQQD 1075 (1082)
Q Consensus 1065 ~f~~l~~~~~~ 1075 (1082)
.|++|++.+..
T Consensus 1538 ~f~~l~~~~~~ 1548 (1560)
T PTZ00243 1538 IFHSMVEALGR 1548 (1560)
T ss_pred HHHHHHHHhCh
Confidence 99999987654
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=6.4e-142 Score=1398.84 Aligned_cols=1021 Identities=20% Similarity=0.275 Sum_probs=772.5
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHH
Q 001411 14 FVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHS 93 (1082)
Q Consensus 14 ~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~ 93 (1082)
++++++++......+++.++++++++++..++++++.+..++.++..+++.+.+.|.++|||+||+|+||+.+.+++++.
T Consensus 210 ~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~ 289 (1490)
T TIGR01271 210 ILLMGLIWELLEVNGFCGLGFLILLALFQACLGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNI 289 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHH
Confidence 33344444444456677777888888888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 001411 94 LKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALG-QAAPNLAAIAKGK 172 (1082)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~ 172 (1082)
++++.+...+......+...+..+.. ..+.++++++|.+.++ ++++.+|+++..+.....++. .++..+..+.++.
T Consensus 290 R~~El~~~~~~~~~~~~~~~~~~~~~--~~~~~~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~ 366 (1490)
T TIGR01271 290 RQDELKLTRKIAYLRYFYSSAFFFSG--FFVVFLSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSL 366 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988887776644444333322 2334556677777654 688999988755555555654 6788889999999
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCC--------------------------------CC
Q 001411 173 AAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSR--------------------------------PH 220 (1082)
Q Consensus 173 ~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~--------------------------------~~ 220 (1082)
+|++||.+||+.++... . .. ......++++|++|.|+.. .+
T Consensus 367 ~s~~RI~~fL~~~e~~~-~-~~-----~~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 439 (1490)
T TIGR01271 367 GAITKIQDFLCKEEYKT-L-EY-----NLTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVT 439 (1490)
T ss_pred HHHHHHHHHhcCccccc-c-cc-----cCCCCceEEecceEecCCccccccccccccccccccccccccccccccccccC
Confidence 99999999996543211 0 00 0112358999999999531 12
Q ss_pred ccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHH
Q 001411 221 MVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANN 300 (1082)
Q Consensus 221 ~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~n 300 (1082)
++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +|+||+|+||+|++||+||
T Consensus 440 ~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eN 506 (1490)
T TIGR01271 440 PVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGELEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDN 506 (1490)
T ss_pred cceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECC-------------EEEEEeCCCccCCccHHHH
Confidence 489999999999999999999999999999999999999999999998 4999999999999999999
Q ss_pred HhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHH
Q 001411 301 ILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEL 380 (1082)
Q Consensus 301 i~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~ 380 (1082)
|.||.+. +.+++.++++.+++.+++..+|+|++|.+|++|.+|||||||||+||||+|++|+|+|||||||+||+++++
T Consensus 507 I~~g~~~-~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~ 585 (1490)
T TIGR01271 507 IIFGLSY-DEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEK 585 (1490)
T ss_pred HHhcccc-chHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHH
Confidence 9999753 445666777777888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH-HHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHhhhc------c--------
Q 001411 381 IVQR-ALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQSS------E-------- 445 (1082)
Q Consensus 381 ~i~~-~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~------~-------- 445 (1082)
.+.+ ++.++.+++|+|+|||+++.++.||+|++|++|++++.|+++++.+.++.|.+.+..... +
T Consensus 586 ~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (1490)
T TIGR01271 586 EIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTE 665 (1490)
T ss_pred HHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHHHhcChHHHHHHhccccccccccccccccccc
Confidence 9887 567777789999999999999999999999999999999999998876666665531000 0
Q ss_pred -------c-cC----CCCc------ccCCC--C-----------------------------CCCCC-CCCCC-------
Q 001411 446 -------H-LS----NPSS------ICYSG--S-----------------------------SRYSS-FRDFP------- 468 (1082)
Q Consensus 446 -------~-~~----~~~~------~~~~~--~-----------------------------~~~~~-~~~~~------- 468 (1082)
. .. .+.. ..... . ...+. ..+..
T Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (1490)
T TIGR01271 666 TLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLV 745 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhccccccccccc
Confidence 0 00 0000 00000 0 00000 00000
Q ss_pred ---------C--Cc-----------cc--------c-------h-h---hhh------------hh------h-hhh---
Q 001411 469 ---------S--SR-----------RY--------D-------V-E---FES------------SK------R-REL--- 485 (1082)
Q Consensus 469 ---------~--~~-----------~~--------~-------~-~---~~~------------~~------~-~~~--- 485 (1082)
. .. .. . . . ... .. . .+.
T Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (1490)
T TIGR01271 746 PEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVY 825 (1490)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0 00 00 0 0 0 000 00 0 000
Q ss_pred --------c-------cCCCCCCCchh---HHHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCc--
Q 001411 486 --------Q-------SSDQSFAPSPS---IWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHD-- 545 (1082)
Q Consensus 486 --------~-------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 545 (1082)
+ ..+.+..+... ++++++. .+.+.++.+.+++.++ ......+..+|..+|....
T Consensus 826 ~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~-~g~~~~~~~~~~~~~~-----~~~~~~~~~~wl~~~~~~~~~ 899 (1490)
T TIGR01271 826 EISEEINEEDLKECFADERENVFETTTWNTYLRYITT-NRNLVFVLIFCLVIFL-----AEVAASLLGLWLITDNPSAPN 899 (1490)
T ss_pred cccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHh-cCcHHHHHHHHHHHHH-----HHHHHHHhhHHHHhccccccc
Confidence 0 00000011111 1122211 1111111111111111 1122334455555553210
Q ss_pred ------h-h-h---------HhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccc
Q 001411 546 ------S-Q-I---------KRVVDQV-ALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLD 607 (1082)
Q Consensus 546 ------~-~-~---------~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~ 607 (1082)
. . . .....+| .++|++++++..++.+++.+++.+.+.+++.++|.+++++++++|++||+.
T Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~- 978 (1490)
T TIGR01271 900 YVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNT- 978 (1490)
T ss_pred ccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-
Confidence 0 0 0 0011122 455556665566777888888999999999999999999999999999985
Q ss_pred CCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 001411 608 ENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYN 687 (1082)
Q Consensus 608 ~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~ 687 (1082)
+|+|+++|||++|++.+|+.++..+..++..++.+++.++++++++|++. ++++|++++++++..++ .+..++.+
T Consensus 979 -~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~---l~~~~l~~~~~~~~~~~-~~~~r~l~ 1053 (1490)
T TIGR01271 979 -MKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIF---IAAIPVAVIFIMLRAYF-LRTSQQLK 1053 (1490)
T ss_pred -CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 89999999999999999999999999999999999998888888887653 34555544444333333 33455555
Q ss_pred HH----HHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 688 RA----YSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVL 763 (1082)
Q Consensus 688 ~~----~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 763 (1082)
+. .+...+++.|++.|+.|||+||+++++.+++.+..+...+..+.......|......++..+......+++
T Consensus 1054 ~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~--- 1130 (1490)
T TIGR01271 1054 QLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIA--- 1130 (1490)
T ss_pred HHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 53 34456999999999999999999999999999999988777766655556655444443332222211111
Q ss_pred HHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCC----------------CCcc
Q 001411 764 IKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDP----------------ASKE 827 (1082)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~----------------~~~~ 827 (1082)
+.......|.+..++.+.......+......+..++..+.+++|+.++.+.+++.+...+ ..++
T Consensus 1131 ~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1210 (1490)
T TIGR01271 1131 IGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQK 1210 (1490)
T ss_pred HHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCC
Confidence 111223344444444444455556677777888999999999999999876554321100 0112
Q ss_pred cccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHH
Q 001411 828 VTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR 907 (1082)
Q Consensus 828 ~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~ 907 (1082)
.||..|.|+|+||+|+|+.. .+++|+|+||+|+||||||||||||||||||+++|+|+++ .+|+|+|||+||++++++
T Consensus 1211 ~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~ 1288 (1490)
T TIGR01271 1211 CWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQ 1288 (1490)
T ss_pred CCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHH
Confidence 35778999999999999742 4689999999999999999999999999999999999998 799999999999999999
Q ss_pred HHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 908 SLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 908 ~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
++|++|+||||||+||+||||+||+|+ .+++|+++|+||++++++++|.++|+||||+|+|+|.+||||||||||||||
T Consensus 1289 ~lR~~is~IpQdp~LF~GTIR~NLdp~-~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARA 1367 (1490)
T TIGR01271 1289 TWRKAFGVIPQKVFIFSGTFRKNLDPY-EQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARS 1367 (1490)
T ss_pred HHHhceEEEeCCCccCccCHHHHhCcc-cCCCHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHH
Confidence 999999999999999999999999995 4789999999999999999999999999999999999999999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccchHH
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYK 1067 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~ 1067 (1082)
|||+|+|||||||||+||++||+.|+++|++.+++||||+||||++++.+||||+||++|+|+|+|+|++|++ ++|.|+
T Consensus 1368 LLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~-~~~~f~ 1446 (1490)
T TIGR01271 1368 ILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLN-ETSLFK 1446 (1490)
T ss_pred HhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHc-CCcHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 689999
Q ss_pred HHHHHhhccC
Q 001411 1068 QLIRLQQDKN 1077 (1082)
Q Consensus 1068 ~l~~~~~~~~ 1077 (1082)
+|++.+....
T Consensus 1447 ~l~~~~~~~~ 1456 (1490)
T TIGR01271 1447 QAMSAADRLK 1456 (1490)
T ss_pred HHHHHhChhc
Confidence 9998765443
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.8e-109 Score=948.02 Aligned_cols=576 Identities=36% Similarity=0.592 Sum_probs=541.7
Q ss_pred hHHHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 497 SIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYF 576 (1082)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 576 (1082)
.+++++.+.++.|+++..++++.++......+.+.+.+++++.++.... ..........++.++.++..++.+++.++
T Consensus 134 ~~~rl~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~--~~~~~~~~~~~l~~l~~~~a~~~~~r~~~ 211 (716)
T KOG0058|consen 134 LLKRLLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDD--SADALKRACTILLGLFLIGALANAIRGGL 211 (716)
T ss_pred HHHHHHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999998888888777777777888888887766111 12233345566777788889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 577 YTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWR 656 (1082)
Q Consensus 577 ~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 656 (1082)
+.++++++..++|.++|+++++++++|||. |.+|++++|++.|...+.+.++..+...+.+.+..++++.++++.+|.
T Consensus 212 ~~~a~~rv~~rlR~~lF~sil~QdiaFFD~--nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~ 289 (716)
T KOG0058|consen 212 LQYAGERVVARLRTDLFRSLLRQDIAFFDE--NKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWR 289 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhcc--CCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHH
Confidence 999999999999999999999999999996 789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHH
Q 001411 657 LAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGH 736 (1082)
Q Consensus 657 l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (1082)
|+++.++.+|++++...++.+++++.+++.+.+.++++....|.+.+++|||+|+.|++..++|.+.+++..+...+...
T Consensus 290 Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~ 369 (716)
T KOG0058|consen 290 LTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAV 369 (716)
T ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 001411 737 ISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKT 816 (1082)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 816 (1082)
..+.+++...+..++.....+|+|..++..|.++.|++.+++++......++..+...+.++.++..|.+|++++++++|
T Consensus 370 a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P 449 (716)
T KOG0058|consen 370 AYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKP 449 (716)
T ss_pred HhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEE
Q 001411 817 AIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLI 896 (1082)
Q Consensus 817 ~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~i 896 (1082)
..+++ ....+. ..+|.|+|+||+|+||.||+.|||+|+||+|+|||+||+||||||||||++++|.|||+|++|+|++
T Consensus 450 ~i~~~-G~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~Ill 527 (716)
T KOG0058|consen 450 RIPLT-GTLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILL 527 (716)
T ss_pred CCCCC-Cccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 87765 222222 6789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCCh
Q 001411 897 DGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSG 976 (1082)
Q Consensus 897 dG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSg 976 (1082)
||+||+++++++||++||+|.|||+||++||+|||.||.+.++||||.+|+++|++|+||..+|+||||.|||+|.+|||
T Consensus 528 DG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSG 607 (716)
T KOG0058|consen 528 DGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSG 607 (716)
T ss_pred CCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChH
Q 001411 977 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHE 1056 (1082)
Q Consensus 977 GQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~ 1056 (1082)
||||||||||||+|||+|||||||||+||.++|..||++|.+..+++|||+|||||+||+.||+|+|+++|+|+|.|+|+
T Consensus 608 GQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~ 687 (716)
T KOG0058|consen 608 GQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHD 687 (716)
T ss_pred hHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccchHHHHHHHhhccCC
Q 001411 1057 QLLRKENGIYKQLIRLQQDKNP 1078 (1082)
Q Consensus 1057 eLl~~~~g~f~~l~~~~~~~~~ 1078 (1082)
||+++++|.|++|++.|....+
T Consensus 688 eLl~~~~gly~~Lv~~q~~~~~ 709 (716)
T KOG0058|consen 688 ELLSKPNGLYAKLVQRQLDSGE 709 (716)
T ss_pred HHhhCcccHHHHHHHHhcccCC
Confidence 9999888999999999876654
No 10
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-95 Score=882.58 Aligned_cols=578 Identities=44% Similarity=0.714 Sum_probs=536.2
Q ss_pred hHHHHHHHh-cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 497 SIWELLKLN-AAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHY 575 (1082)
Q Consensus 497 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 575 (1082)
++.+++++. +..+..+.++.+++++.|+..|++...+.++.+.+..............+.+.|+.+++..++..+++..
T Consensus 14 ~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~~~lg~~~~~~~~~q~~ 93 (1228)
T KOG0055|consen 14 SFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYFVYLGVGVFISGFIQVS 93 (1228)
T ss_pred chHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444432 3345667788999999999999999999988887754332122234566788888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 576 FYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSW 655 (1082)
Q Consensus 576 ~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 655 (1082)
++.+.+++...++|.+.++++++++++|||. +..|.+.+|+++|++.+++.+++.+..+++.+.+++.++++.|+..|
T Consensus 94 c~~~~geRq~~riR~~yl~~iLrQdi~~fD~--~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~~W 171 (1228)
T KOG0055|consen 94 CWMRTGERQTARIRSKYLKAILRQDIGWFDT--NSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYYGW 171 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccceeec--ccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999997 44599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHH
Q 001411 656 RLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRG 735 (1082)
Q Consensus 656 ~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1082)
+++++++.++|++++......+.+.+...+.+..++++.+.+.|++.+++|+.+|+.|+...++|.+.++...+...+.+
T Consensus 172 ~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi~~g 251 (1228)
T KOG0055|consen 172 KLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGIKKG 251 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888888888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 001411 736 HISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRK 815 (1082)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~ 815 (1082)
.+.++..++..++.++.+++.+|+|..++..+..+.|.++.++..+...+..++++......+.++..+..++++.++..
T Consensus 252 ~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i~~~ 331 (1228)
T KOG0055|consen 252 LFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETIDRK 331 (1228)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEE
Q 001411 816 TAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVL 895 (1082)
Q Consensus 816 ~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~ 895 (1082)
++.++...........+|.|+|+||+|+||+||+.++|+|+||+|++||+|||||+|||||||++++|.|||+|++|+|+
T Consensus 332 ~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V~ 411 (1228)
T KOG0055|consen 332 PSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEVL 411 (1228)
T ss_pred CCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceEE
Confidence 87776542232334578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCC
Q 001411 896 IDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 975 (1082)
Q Consensus 896 idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LS 975 (1082)
|||.|+++++.++||++||+|.|||+||++||+|||.+|.|+++++|+.+|++.+++++||.+||+||||.|||+|.+||
T Consensus 412 idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qLS 491 (1228)
T KOG0055|consen 412 IDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQLS 491 (1228)
T ss_pred EcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecCh
Q 001411 976 GGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSH 1055 (1082)
Q Consensus 976 gGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~ 1055 (1082)
|||||||||||||+|+|+|||||||||+||+++|+.||++|++..+|+|.|+|||||+||+++|+|+||++|+|+|.|+|
T Consensus 492 GGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~G~h 571 (1228)
T KOG0055|consen 492 GGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQGTH 571 (1228)
T ss_pred hHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEecCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccchHHHHHHHhhccC
Q 001411 1056 EQLLRKENGIYKQLIRLQQDKN 1077 (1082)
Q Consensus 1056 ~eLl~~~~g~f~~l~~~~~~~~ 1077 (1082)
+||++++ |.|++|++.|....
T Consensus 572 ~ELi~~~-G~Y~~lv~~Q~~~~ 592 (1228)
T KOG0055|consen 572 DELIALG-GIYSSLVRLQELEK 592 (1228)
T ss_pred HHHHhcc-chHHHHHHHHhhhh
Confidence 9999964 99999999885443
No 11
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.1e-92 Score=852.44 Aligned_cols=517 Identities=34% Similarity=0.552 Sum_probs=490.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHH
Q 001411 551 VVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALA 630 (1082)
Q Consensus 551 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~ 630 (1082)
.+......++++++...++.+++.++..+.+.++...+-.++++|+++.|++||.. +++|++++|+ +|++.|++++.
T Consensus 192 tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~--r~~Ge~~sR~-~el~~Ir~flt 268 (709)
T COG2274 192 TLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEK--RSVGEIISRV-RELEQIREFLT 268 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccC--CChhhHHHHH-HHHHHHHHHHH
Confidence 34455666777788888999999999999999999999999999999999999974 7999999998 59999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHc
Q 001411 631 DRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAY 710 (1082)
Q Consensus 631 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~ 710 (1082)
......+.+++..++.++++++++|.+++++++.+|+.++..++..+++++..++.....++..++..|++.|++|||+.
T Consensus 269 ~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~ 348 (709)
T COG2274 269 GSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKAL 348 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHh
Confidence 99999999999999999999999999999999999999999999999999988888888889999999999999999999
Q ss_pred CcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 001411 711 GIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAE 790 (1082)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (1082)
+.|.++..+|.+.+.+..+..++......+...+..++..+...+.+|+|+.++..+.+|+|.++++.+....+..++..
T Consensus 349 ~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~ 428 (709)
T COG2274 349 AAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITR 428 (709)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEc
Q 001411 791 TLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVG 870 (1082)
Q Consensus 791 ~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG 870 (1082)
+.+.+.++.....+.+|+.++++.++|.+.+.. ....++..|.|+|+||+|+|+.+ ++++|+|+||+|+|||+|||||
T Consensus 429 L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~-~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG 506 (709)
T COG2274 429 LSQLWTDFQQAKVALERLGDILDTPPEQEGDKT-LIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVG 506 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccccccc-cccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEEC
Confidence 999999999999999999999998877554331 22345678999999999999854 3479999999999999999999
Q ss_pred CCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHh
Q 001411 871 QSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAA 950 (1082)
Q Consensus 871 ~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a 950 (1082)
+||||||||+|+|.|+|+|++|+|++||+|+++++++.+|++|+|||||++||+|||||||+++.|++++||+++||+.+
T Consensus 507 ~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~a 586 (709)
T COG2274 507 RSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLA 586 (709)
T ss_pred CCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEec
Q 001411 951 NAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAH 1030 (1082)
Q Consensus 951 ~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaH 1030 (1082)
++|+||.++|.||||+|||+|.+|||||||||+|||||+++|+||||||||||||++||+.|.+.|.+..++||+|+|||
T Consensus 587 g~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaH 666 (709)
T COG2274 587 GAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAH 666 (709)
T ss_pred CcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHHHHHh
Q 001411 1031 RLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQ 1073 (1082)
Q Consensus 1031 rl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~ 1073 (1082)
|++++++||||+|||+|+|+|+|+|+||++. +|.|+++|+.|
T Consensus 667 Rl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g~y~~l~~~q 708 (709)
T COG2274 667 RLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GGLYARLYQQQ 708 (709)
T ss_pred cchHhhhccEEEEccCCceeccCCHHHHHHh-cChHHHHHhcc
Confidence 9999999999999999999999999999995 99999999866
No 12
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=6.2e-87 Score=813.52 Aligned_cols=552 Identities=36% Similarity=0.568 Sum_probs=487.3
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 511 YAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRL 590 (1082)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 590 (1082)
.+.++.++.++........+..+..+++... . .......+...++++.++..++.++..+...+.+.+...++|.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~ 89 (567)
T COG1132 15 LLLLAILLLLLSALLSLLLPLLIGRIIDALL-A----DLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRR 89 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-h----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555555555555555544 1 1122233455555666677778888888888888999999999
Q ss_pred HHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 591 SMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIG 670 (1082)
Q Consensus 591 ~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~ 670 (1082)
++++++++.|++||+. +++|++++|+++|++.++..+......+...++..++.+++++..+|.+++++++..|++.+
T Consensus 90 ~~~~~l~~~~~~~~~~--~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~ 167 (567)
T COG1132 90 DLFEKLLRLPLSFFDK--AKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLAL 167 (567)
T ss_pred HHHHHHHhCCHHHhCc--CCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999999999985 78999999999999999999998866666678888888999999999999999999999888
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 671 AFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSL 750 (1082)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (1082)
......+..++..+..++...+..+.+.|+++|+++||+|+.++...+++.+..+...+...+.....+...++...+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (567)
T COG1132 168 VLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSS 247 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777766677788888888999999999999999999999999999999999888888887777777877788888899
Q ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCccccc
Q 001411 751 CSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTE 830 (1082)
Q Consensus 751 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~ 830 (1082)
+...+.++++..++..+.++.|.+..++.+......++.........+..+..+.+|++++++.+++....... ...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~---~~~ 324 (567)
T COG1132 248 LGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP---LKD 324 (567)
T ss_pred HHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC---CCC
Confidence 99999999999999999999999998888888888899999999999999999999999999875543222111 234
Q ss_pred ccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHh
Q 001411 831 IKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLR 910 (1082)
Q Consensus 831 ~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR 910 (1082)
..|.|+|+||+|+|++ ++++|+|+||+|+|||++||||||||||||++++|+|+|+|++|+|+|||+||+++++++||
T Consensus 325 ~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr 402 (567)
T COG1132 325 TIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLR 402 (567)
T ss_pred CCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHH
Confidence 5678999999999972 56899999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHcc
Q 001411 911 RKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILK 990 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~ 990 (1082)
++|++|||||+||+|||++||++|.++++|||+++|++.++++|||+++|+||||.|||+|.+||||||||||||||+++
T Consensus 403 ~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~ 482 (567)
T COG1132 403 KRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLR 482 (567)
T ss_pred HhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHHH
Q 001411 991 NPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLI 1070 (1082)
Q Consensus 991 ~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~ 1070 (1082)
+|||||||||||+||++||+.|++++++..+++|+|+||||++|+++||+|+|||+|+|+|+|+|+||++ .+|.|++||
T Consensus 483 ~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~-~~g~y~~l~ 561 (567)
T COG1132 483 NPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLA-KGGLYARLY 561 (567)
T ss_pred CCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHH-cCCHHHHHH
Confidence 9999999999999999999999999998888999999999999999999999999999999999999998 499999999
Q ss_pred HHhhc
Q 001411 1071 RLQQD 1075 (1082)
Q Consensus 1071 ~~~~~ 1075 (1082)
+.|..
T Consensus 562 ~~~~~ 566 (567)
T COG1132 562 QAQGG 566 (567)
T ss_pred HHhhc
Confidence 98753
No 13
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.9e-89 Score=782.78 Aligned_cols=440 Identities=46% Similarity=0.706 Sum_probs=418.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc
Q 001411 2 QTGHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFV 81 (1082)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~ 81 (1082)
++...+++..+.++++.+||+++|+|+++.++.+|+++++..+++++.++..++.|++.+++++..+|.+++|||||+|+
T Consensus 265 nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa 344 (716)
T KOG0058|consen 265 NLSDGLRNLVQGFGGLGFMFSLSWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFA 344 (716)
T ss_pred HHHHHHHHHHHHHHhHHHHhhhhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhh
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHH
Q 001411 82 GEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQA 161 (1082)
Q Consensus 82 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~ 161 (1082)
.|+.+.+||.+..++..+..+|.....+.+.+...+...+..+.++++|++++.+|.+|.|.+.+++++......++..+
T Consensus 345 ~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~l 424 (716)
T KOG0058|consen 345 AEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGL 424 (716)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888888899999999999999999999999999999999988999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCC-ccccceeEEEeCCCEEEEEc
Q 001411 162 APNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPH-MVFENLNFSVDAGKTFAFVG 240 (1082)
Q Consensus 162 ~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~-~~l~~i~l~i~~g~~~~ivG 240 (1082)
...+..++++..|.+|+++++|.+|..+.. ....+....+.|+|+||+|+||.++. ++|+|+||+|+|||.||+||
T Consensus 425 s~~ys~lmkgvGAs~rvFel~dr~P~i~~~---G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVG 501 (716)
T KOG0058|consen 425 SSFYSELMKGVGASERVFELMDRKPRIPLT---GTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVG 501 (716)
T ss_pred HHHHHHHHHhcchHHHHHHHhccCCCCCCC---CccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEEC
Confidence 999999999999999999999988775521 11122256789999999999998865 49999999999999999999
Q ss_pred CCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHh
Q 001411 241 PSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAA 320 (1082)
Q Consensus 241 ~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~ 320 (1082)
||||||||++++|.++|+|++|+|.+||+||+++++.+||++||+|.|||.||++||+|||.||.++.++|++..|++.+
T Consensus 502 PSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~A 581 (716)
T KOG0058|consen 502 PSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMA 581 (716)
T ss_pred CCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEcc
Q 001411 321 NAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAH 400 (1082)
Q Consensus 321 ~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH 400 (1082)
++|+||.++|+||+|.+||+|.+|||||||||||||||++||.||||||+|||||+++|..++++|.+..+++|||+|+|
T Consensus 582 Nah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAH 661 (716)
T KOG0058|consen 582 NAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAH 661 (716)
T ss_pred ChHHHHHhCccccccccCCccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCEEEEEeCCEEEEecCchhhhhcC-chhHHHHHhhhc
Q 001411 401 RLSTVRDVDTIMVLKNGQVVESGTHVDLISKG-GEYAALVNLQSS 444 (1082)
Q Consensus 401 ~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~~~~~~~~~~~ 444 (1082)
|++++++||+|+|+++|+++|.|+|+||+++. |.|.++++.|..
T Consensus 662 RLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 662 RLSTVRHADQIVVIDKGRVVEMGTHDELLSKPNGLYAKLVQRQLD 706 (716)
T ss_pred hhhHhhhccEEEEEcCCeEEecccHHHHhhCcccHHHHHHHHhcc
Confidence 99999999999999999999999999999997 899999987654
No 14
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.2e-85 Score=806.96 Aligned_cols=566 Identities=21% Similarity=0.292 Sum_probs=473.8
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 499 WELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYT 578 (1082)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 578 (1082)
.+++.+.+++++.+.++.++.++..+.....++.+..+++.....+. +. .....+..+++++.++..++.+++.++..
T Consensus 11 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK11174 11 RWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENI-PR-EALLPPFILLILLFVLRALLAWLRERVGF 88 (588)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666777777777777777666666667777776665432111 11 11223444555566677788888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 579 LMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLA 658 (1082)
Q Consensus 579 ~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 658 (1082)
+.+.+...++|.++++++++.|++||+. +++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.++
T Consensus 89 ~~~~~~~~~lr~~~~~~ll~~~~~~~~~--~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 166 (588)
T PRK11174 89 KAGQHIRQQIRQQVLDKLQQLGPAWIQG--KPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAG 166 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhcc--CCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999974 78999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 001411 659 AVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHIS 738 (1082)
Q Consensus 659 ~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (1082)
+++++++|++++......+..++..++.++...+..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+..+..
T Consensus 167 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (588)
T PRK11174 167 LILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMA 246 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888877777777777777778888889999999999999999999999999999999998888877776666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 739 GFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDI---------MKSFMVLIITALAVAETLALAPDIVKGSQALGPVF 809 (1082)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~ 809 (1082)
.+...+...+..+..++..+++...+ .|.+++|.+ +.++.+......++..+...+..+..+..+.+|+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~ 325 (588)
T PRK11174 247 FLSSAVLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLV 325 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666555555544444444443333 366776653 11112223345677788888889999999999999
Q ss_pred HhhcccccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC
Q 001411 810 GILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP 889 (1082)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p 889 (1082)
++++.+++.++.. ....+.+..+.|+|+||+|.|++ ++++|+|+||+|+|||++||||+||||||||+++|+|+| |
T Consensus 326 ~~l~~~~~~~~~~-~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p 401 (588)
T PRK11174 326 TFLETPLAHPQQG-EKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P 401 (588)
T ss_pred HHHcCCCcccCCC-ccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C
Confidence 9987654322111 10111123457999999988762 457999999999999999999999999999999999999 9
Q ss_pred CccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccC
Q 001411 890 ISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGD 969 (1082)
Q Consensus 890 ~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e 969 (1082)
++|+|.+||+|+++++.+++|++|+||||||+||+|||||||.++.|+++|+|+++|++.++++++|+++|+||||.|||
T Consensus 402 ~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge 481 (588)
T PRK11174 402 YQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGD 481 (588)
T ss_pred CCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccccccccc
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEE
Q 001411 970 RGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKV 1049 (1082)
Q Consensus 970 ~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~i 1049 (1082)
+|.+||||||||||||||++++|+|||||||||+||++||+.|+++|++..+++|+|+||||++++.+||+|+||++|+|
T Consensus 482 ~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i 561 (588)
T PRK11174 482 QAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQI 561 (588)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeE
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred EEecChHHHhhhccchHHHHHHHhh
Q 001411 1050 AEIGSHEQLLRKENGIYKQLIRLQQ 1074 (1082)
Q Consensus 1050 ve~G~~~eLl~~~~g~f~~l~~~~~ 1074 (1082)
+|.|+|+||++ ++|.|+++++.|.
T Consensus 562 ~e~G~~~eL~~-~~~~y~~l~~~q~ 585 (588)
T PRK11174 562 VQQGDYAELSQ-AGGLFATLLAHRQ 585 (588)
T ss_pred eecCCHHHHHh-cchHHHHHHHHhh
Confidence 99999999998 5899999998765
No 15
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=3.6e-85 Score=813.30 Aligned_cols=564 Identities=32% Similarity=0.508 Sum_probs=495.7
Q ss_pred hHHHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 497 SIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYF 576 (1082)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 576 (1082)
.+++++++.++.++++...+++.++..+.....++....+++........ ........+++++.++..++.+++.++
T Consensus 148 ~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~ 224 (711)
T TIGR00958 148 LLFRLLGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGP---PALASAIFFMCLLSIASSVSAGLRGGS 224 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666677777777777666666666666677777777655432211 112223344555566677778888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 577 YTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWR 656 (1082)
Q Consensus 577 ~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 656 (1082)
+.+.+.++..++|.+++++++++|++||+. +++|++++|+++|++.+++.+...+..++.+++.+++.+++++.++|.
T Consensus 225 ~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~--~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~ 302 (711)
T TIGR00958 225 FNYTMARINLRIREDLFRSLLRQDLGFFDE--NKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPR 302 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHcC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999985 789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHH
Q 001411 657 LAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGH 736 (1082)
Q Consensus 657 l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (1082)
+++++++.+|+.+++.....++.++..++.++...+..+++.|+++|+++||+|+.|+.+.++|.+..++..+...+...
T Consensus 303 l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 382 (711)
T TIGR00958 303 LTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKAL 382 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888888888888888899999999999999999999999999999999998888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 001411 737 ISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKT 816 (1082)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 816 (1082)
.......+...+..+..++.+++|.+++..|.++.|+++++..+......++..+...+..+.++..+.+|++++++.++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 462 (711)
T TIGR00958 383 AYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKP 462 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 76766666777777777888899999999999999999999888888999999999999999999999999999998765
Q ss_pred cCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEE
Q 001411 817 AIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLI 896 (1082)
Q Consensus 817 ~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~i 896 (1082)
+.+... ...+++..|.|+|+||+|+||++++.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++
T Consensus 463 ~~~~~~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i 540 (711)
T TIGR00958 463 NIPLTG--TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLL 540 (711)
T ss_pred CCCCCC--CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEE
Confidence 433211 111224567899999999998665678999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCCh
Q 001411 897 DGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSG 976 (1082)
Q Consensus 897 dG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSg 976 (1082)
||+|+++++.+++|++|+||||||++|+|||||||.++.++.+|+++++|++.++++++++++|+||||.+||+|.+|||
T Consensus 541 dg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 620 (711)
T TIGR00958 541 DGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSG 620 (711)
T ss_pred CCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChH
Q 001411 977 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHE 1056 (1082)
Q Consensus 977 GQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~ 1056 (1082)
|||||||||||++++|+|||||||||+||++||+.|++ ....+++|+|+||||++++..||+|+||++|+|+|+|+|+
T Consensus 621 GQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~ 698 (711)
T TIGR00958 621 GQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHK 698 (711)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHH
Confidence 99999999999999999999999999999999999999 3345789999999999999999999999999999999999
Q ss_pred HHhhhccchHHHHH
Q 001411 1057 QLLRKENGIYKQLI 1070 (1082)
Q Consensus 1057 eLl~~~~g~f~~l~ 1070 (1082)
||++ ++|.|++|+
T Consensus 699 eL~~-~~~~y~~lv 711 (711)
T TIGR00958 699 QLME-DQGCYKHLV 711 (711)
T ss_pred HHHh-CCCchHhcC
Confidence 9998 578999874
No 16
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.2e-83 Score=801.20 Aligned_cols=553 Identities=27% Similarity=0.373 Sum_probs=483.6
Q ss_pred chhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 507 AEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTA 586 (1082)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 586 (1082)
+.++.+...++..++..+.....++.+..+++....... ......+.++++++.++..++.+++.++..+.+.++..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (686)
T TIGR03797 133 GARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD---RSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDA 209 (686)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444455555554432211 11223345556666677788888999999999999999
Q ss_pred HHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 587 RVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLP 666 (1082)
Q Consensus 587 ~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p 666 (1082)
++|.++++++++.|++||+. +++|++++|++ |++.+++.+...+...+.+++.+++++++++.++|.+++++++++|
T Consensus 210 ~l~~~~~~~ll~~~~~~~~~--~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~ 286 (686)
T TIGR03797 210 SLQAAVWDRLLRLPVSFFRQ--YSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALAL 286 (686)
T ss_pred HHHHHHHHHHHcCCHHHHCC--CChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999974 79999999997 7999999998888888888888888888999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 001411 667 LLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQ 746 (1082)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (1082)
+.+++.++..+..++..++..+...+..+++.|+++|+++||++|.++++.++|.+..++..+...+......+...+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (686)
T TIGR03797 287 VAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNA 366 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877888777777888888888899999999999999999999999999999999999999998888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCc
Q 001411 747 LLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASK 826 (1082)
Q Consensus 747 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~ 826 (1082)
.+..+...+.+|+|.+++..|.++.|.++++.++......++..+...+..+..+..+.+|+.++++.+++.+... .
T Consensus 367 ~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~---~ 443 (686)
T TIGR03797 367 VLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK---T 443 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc---C
Confidence 8888888999999999999999999999999888888889999999999999999999999999987654432111 1
Q ss_pred ccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCH
Q 001411 827 EVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL 906 (1082)
Q Consensus 827 ~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~ 906 (1082)
.+.+..|.|+|+||+|+|+.. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|++++++
T Consensus 444 ~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~ 522 (686)
T TIGR03797 444 DPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDV 522 (686)
T ss_pred CCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCH
Confidence 112345789999999999733 4579999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
+++|++|+||||||++|+|||||||.++.+ ++|+++++|++.++++++|+++|+||||++||+|.+|||||||||+|||
T Consensus 523 ~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialAR 601 (686)
T TIGR03797 523 QAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIAR 601 (686)
T ss_pred HHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999888 9999999999999999999999999999999999999999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccchH
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIY 1066 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f 1066 (1082)
|++++|+|||||||||+||++||+.|++.|++. ++|+|+||||++++..||+|+||++|+|+|.|+|+||++ ++|.|
T Consensus 602 All~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~-~~~~y 678 (686)
T TIGR03797 602 ALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMA-REGLF 678 (686)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHh-CCcHH
Confidence 999999999999999999999999999999986 689999999999999999999999999999999999998 68999
Q ss_pred HHHHHHh
Q 001411 1067 KQLIRLQ 1073 (1082)
Q Consensus 1067 ~~l~~~~ 1073 (1082)
++|++.|
T Consensus 679 ~~l~~~q 685 (686)
T TIGR03797 679 AQLARRQ 685 (686)
T ss_pred HHHHHhc
Confidence 9999865
No 17
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-83 Score=726.33 Aligned_cols=550 Identities=25% Similarity=0.368 Sum_probs=486.4
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 517 VGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAI 596 (1082)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 596 (1082)
++.++.++......+++...+...+.... ......+...++++.++..+..+.+......++.++...||.++++++
T Consensus 7 ll~~l~~i~~i~qa~llA~~l~~l~~~~~---~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l 83 (559)
T COG4988 7 LLAVLSGIAIIAQAALLADILTKLIEGQL---FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKL 83 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555556666666666654421 223445667777788888899999999999999999999999999999
Q ss_pred HhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 597 LSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQ 676 (1082)
Q Consensus 597 l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~ 676 (1082)
.+.+..|-.. .|+|...+..+..++.++.++...+++.+.+.+.++..++.+++++|..+++++++.|++.+++++..
T Consensus 84 ~~~gp~~~~~--~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg 161 (559)
T COG4988 84 AKLGPAFIAQ--KPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVG 161 (559)
T ss_pred HhCChhhhcC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998764 79999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 677 LFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALG 756 (1082)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (1082)
...+..+++....+.+.+++|.+.++|+.|+|+||..++..++..+..++..+..++..+..-....+..++.++..++.
T Consensus 162 ~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlv 241 (559)
T COG4988 162 LAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALV 241 (559)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888999999999999999999999999999999999999999999999999988888777888888888777665
Q ss_pred H-HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccccccE
Q 001411 757 L-WYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNI 835 (1082)
Q Consensus 757 ~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I 835 (1082)
. ++|..++..|.+++...+.++...--+..++....+.+..-..+..+.+.++.+++.+.+..+........+.....|
T Consensus 242 Av~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ei 321 (559)
T COG4988 242 AVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEI 321 (559)
T ss_pred HHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCcee
Confidence 4 445555444788887777777777778889999999999999998999999999877654333221111112223346
Q ss_pred EEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEE
Q 001411 836 ELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGL 915 (1082)
Q Consensus 836 ~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~ 915 (1082)
+++|++|+||+ ++++++|+||+++||+++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+.||+++++
T Consensus 322 ~~~~l~~~y~~--g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~ 399 (559)
T COG4988 322 SLENLSFRYPD--GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISW 399 (559)
T ss_pred eecceEEecCC--CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeee
Confidence 66799999984 3389999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 001411 916 VQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSIL 995 (1082)
Q Consensus 916 VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~IL 995 (1082)
|||+|++|+|||||||.+++++.+|++++++++++++.+|+.. |+|+||.+||+|.+|||||+||++||||++++++++
T Consensus 400 v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~ 478 (559)
T COG4988 400 VSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLL 478 (559)
T ss_pred eCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEE
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHHHHHhhc
Q 001411 996 LLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQD 1075 (1082)
Q Consensus 996 lLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~~~ 1075 (1082)
|||||||+||.+||+.|++.|.+.++++|||+||||++.+.++|+|+|||+||++|.|+|++|.+ ++|.|++|+..|..
T Consensus 479 llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~-~~~~y~~l~~~q~~ 557 (559)
T COG4988 479 LLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSE-KQGLYANLLKQQEG 557 (559)
T ss_pred EecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhh-cCcHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999998 68999999998764
No 18
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.9e-83 Score=800.36 Aligned_cols=561 Identities=25% Similarity=0.390 Sum_probs=487.4
Q ss_pred HHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 500 ELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTL 579 (1082)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 579 (1082)
+++.+.++.++.+...++..++..+.....++.+..+++....... ......+..+++++.++..++.+++.++..+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (708)
T TIGR01193 146 KFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM---MGTLGIISIGLIIAYIIQQILSYIQIFLLNV 222 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555555554444444444444455555555555443211 1122233444555566677888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 580 MGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAA 659 (1082)
Q Consensus 580 ~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 659 (1082)
.+.++..++|.++++++++.|++||+. +++|++++|++ |.+.+.+.+...+...+.+++.+++.++++++++|.+++
T Consensus 223 ~~~~~~~~l~~~~~~~ll~l~~~~f~~--~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 299 (708)
T TIGR01193 223 LGQRLSIDIILSYIKHLFELPMSFFST--RRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFL 299 (708)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCC--CchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 999999999999999999999999975 89999999998 999999998888888888888888888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 001411 660 VVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISG 739 (1082)
Q Consensus 660 ~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (1082)
++++++|+++++.+...+..++..++..+...+..+.+.|+++|+++||+||.++.+.++|.+..++..+...+......
T Consensus 300 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (708)
T TIGR01193 300 LSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQ 379 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888888888888889999999999999999999999999999999999998888888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCC
Q 001411 740 FGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQ 819 (1082)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 819 (1082)
+...+..++..+...+.+|+|..++..|.++.|.++++..+......++..+...+..+..+..+.+|+.++++.+++.+
T Consensus 380 ~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 459 (708)
T TIGR01193 380 GQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFI 459 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 77777777777888889999999999999999999999888888889999999999999999999999999987655433
Q ss_pred CCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCc
Q 001411 820 PDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGY 899 (1082)
Q Consensus 820 ~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~ 899 (1082)
.... ....++..|.|+|+||+|+|+. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+
T Consensus 460 ~~~~-~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~ 536 (708)
T TIGR01193 460 NKKK-RTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGF 536 (708)
T ss_pred cccc-ccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCE
Confidence 2211 1112345678999999999973 457999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcceEEEcccCccccccHHHHhccC-CCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhH
Q 001411 900 DIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYG-NEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQ 978 (1082)
Q Consensus 900 di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~-~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQ 978 (1082)
|+++++++++|++|+||||||+||+|||||||.++ .++++|+++++|++.++++++|.++|+||||.+||+|.+|||||
T Consensus 537 ~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQ 616 (708)
T TIGR01193 537 SLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQ 616 (708)
T ss_pred EHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHH
Confidence 99999999999999999999999999999999998 47899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHH
Q 001411 979 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 979 rQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||||+||||++++|+|||||||||+||++||+.|++.|++. +++|+|+||||++++..||+|+||++|+++|.|+|+||
T Consensus 617 rQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L 695 (708)
T TIGR01193 617 KQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDEL 695 (708)
T ss_pred HHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999974 78999999999999999999999999999999999999
Q ss_pred hhhccchHHHHHH
Q 001411 1059 LRKENGIYKQLIR 1071 (1082)
Q Consensus 1059 l~~~~g~f~~l~~ 1071 (1082)
++ ++|.|++|++
T Consensus 696 ~~-~~~~y~~l~~ 707 (708)
T TIGR01193 696 LD-RNGFYASLIH 707 (708)
T ss_pred Hh-cCCcHHHHhh
Confidence 98 5899999985
No 19
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=8.6e-83 Score=797.17 Aligned_cols=509 Identities=28% Similarity=0.389 Sum_probs=464.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHH
Q 001411 555 VALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLS 634 (1082)
Q Consensus 555 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~ 634 (1082)
+...++++.++..++.+++.++....+.++..+++.++++++++.|++||+. .++|++++|++.| +.+++.+...+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~--~~~g~~~~r~~~~-~~i~~~~~~~~~ 272 (710)
T TIGR03796 196 LLLGMGLTALLQGVLTWLQLYYLRRLQIKLAVGMSARFLWHILRLPVRFFAQ--RHAGDIASRVQLN-DQVAEFLSGQLA 272 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC--CcccHHHHHhhhH-HHHHHHHHHHHH
Confidence 4445555666677888899999999999999999999999999999999975 8999999999998 689999998899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHH
Q 001411 635 IIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEK 714 (1082)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~ 714 (1082)
..+.+++.+++.+++++.++|.+++++++++|+.+++.++..+..++..++..+...+..+.+.|+++|+++||++|+++
T Consensus 273 ~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~ 352 (710)
T TIGR03796 273 TTALDAVMLVFYALLMLLYDPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLES 352 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCH
Confidence 99999999999999999999999999999999988888887777777777777788888999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 715 RISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLAL 794 (1082)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1082)
.+.++|.+...+..+...+......+...+...+..+...+.+|+|.+++..|.++.|.++++..+......++..+...
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~ 432 (710)
T TIGR03796 353 DFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGF 432 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888888888888888888889999999999999999999999888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCC---C-Cccc-ccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEE
Q 001411 795 APDIVKGSQALGPVFGILYRKTAIQPDDP---A-SKEV-TEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVV 869 (1082)
Q Consensus 795 ~~~~~~~~~a~~ri~~~~~~~~~~~~~~~---~-~~~~-~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIv 869 (1082)
+..+..+..+.+|+.++++.+++.+.... . .... ++..|.|+|+||+|+|+.. ++++|+|+||+|+|||++|||
T Consensus 433 ~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIv 511 (710)
T TIGR03796 433 GGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALV 511 (710)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEE
Confidence 99999999999999999876554322110 0 0111 2346789999999999842 457999999999999999999
Q ss_pred cCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHH
Q 001411 870 GQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKA 949 (1082)
Q Consensus 870 G~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~ 949 (1082)
|+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||||++|+|||||||.++.++++|+++++|++.
T Consensus 512 G~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~ 591 (710)
T TIGR03796 512 GGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKD 591 (710)
T ss_pred CCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998888999999999999
Q ss_pred hcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEe
Q 001411 950 ANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVA 1029 (1082)
Q Consensus 950 a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~Ia 1029 (1082)
++++++|.++|+||||.+||+|.+|||||||||+||||++++|+|||||||||+||++||+.|.+.|++ .++|+|+||
T Consensus 592 ~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~Iiit 669 (710)
T TIGR03796 592 AAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVA 669 (710)
T ss_pred hCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999999987 589999999
Q ss_pred cCchhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHHH
Q 001411 1030 HRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLI 1070 (1082)
Q Consensus 1030 Hrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~ 1070 (1082)
||++++..||||+||++|+|+|.|+|+||++ ++|.|++|+
T Consensus 670 Hrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll~-~~~~y~~l~ 709 (710)
T TIGR03796 670 HRLSTIRDCDEIIVLERGKVVQRGTHEELWA-VGGAYARLI 709 (710)
T ss_pred cCHHHHHhCCEEEEEeCCEEEEecCHHHHHH-cCCcHHHHh
Confidence 9999999999999999999999999999998 689999987
No 20
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.2e-82 Score=771.51 Aligned_cols=564 Identities=23% Similarity=0.305 Sum_probs=474.2
Q ss_pred HHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCch-hhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 501 LLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDS-QIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTL 579 (1082)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 579 (1082)
++++.+++++.+.+++++.++..+.....++.+..+++........ ........+...+++++++..++.++..++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (574)
T PRK11160 7 FLKLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHD 86 (574)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555555555555554444444444455554433211110 000011112233445566777888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 580 MGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAA 659 (1082)
Q Consensus 580 ~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 659 (1082)
.+.+...++|.++++++++.|+.||+. .++|++++|+++|++.++..+...+..++..++.++++++++++++|.+++
T Consensus 87 ~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 164 (574)
T PRK11160 87 ATFRVLTHLRVFTFSKLLPLSPAGLAR--YRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLAL 164 (574)
T ss_pred HHHHHHHHHHHHHHHHhhccChHhhcc--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999985 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 001411 660 VVAASLPLLIGA-FVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHIS 738 (1082)
Q Consensus 660 ~~l~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (1082)
++++++|+++++ .++..+..+...++.++...+..+.+.|.++|+++||+||.++++.++|.+..++..+...+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (574)
T PRK11160 165 TLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLT 244 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888876543 3455566666677778888899999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 001411 739 GFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLII-TALAVAETLALAPDIVKGSQALGPVFGILYRKTA 817 (1082)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 817 (1082)
++...+...+..+..++.+|+|..+ ..|.++.|.+++++.+... ...++..+...+..+..+..+.+|+.++++.+++
T Consensus 245 ~~~~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~ 323 (574)
T PRK11160 245 GLSQALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPE 323 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 8888888888888888888999888 4788899988776655433 3345566677788888999999999999886654
Q ss_pred CCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEC
Q 001411 818 IQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLID 897 (1082)
Q Consensus 818 ~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~id 897 (1082)
.+.... ....+..+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++|
T Consensus 324 ~~~~~~--~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~ 400 (574)
T PRK11160 324 VTFPTT--STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLN 400 (574)
T ss_pred CCCCcc--cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEC
Confidence 321111 1112345789999999999742 3479999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChh
Q 001411 898 GYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGG 977 (1082)
Q Consensus 898 G~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgG 977 (1082)
|+|+++++.+++|++|+||||||++|++||+|||.++.++++|++++++++.+++++++++ |+||||.+||+|.+||||
T Consensus 401 g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgG 479 (574)
T PRK11160 401 GQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGG 479 (574)
T ss_pred CEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHH
Confidence 9999999999999999999999999999999999999889999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHH
Q 001411 978 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQ 1057 (1082)
Q Consensus 978 QrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~e 1057 (1082)
||||+|||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|+|
T Consensus 480 qrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~ 559 (574)
T PRK11160 480 EQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQE 559 (574)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred HhhhccchHHHHHHH
Q 001411 1058 LLRKENGIYKQLIRL 1072 (1082)
Q Consensus 1058 Ll~~~~g~f~~l~~~ 1072 (1082)
|++ ++|.|++||+.
T Consensus 560 l~~-~~g~y~~l~~~ 573 (574)
T PRK11160 560 LLA-QQGRYYQLKQR 573 (574)
T ss_pred HHh-cCcHHHHHHhh
Confidence 998 68999999863
No 21
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=9.7e-82 Score=772.43 Aligned_cols=564 Identities=26% Similarity=0.361 Sum_probs=471.5
Q ss_pred HHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 501 LLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLM 580 (1082)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 580 (1082)
++.+.+++++.+.+..++.++..+.....++.+..+++..+....... .....+.++++++.++..++.+++.++....
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (592)
T PRK10790 14 LLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPL-GLVAGLAAAYVGLQLLAAGLHYAQSLLFNRA 92 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444455555555555555555555566666666665543221111 1111223334455556667778888889999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 581 GEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAV 660 (1082)
Q Consensus 581 ~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 660 (1082)
+.+...++|.++++++++.|++||+. .++|++++|+++|++.++..+...+..++..++.+++.++++++++|.++++
T Consensus 93 ~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li 170 (592)
T PRK10790 93 AVGVVQQLRTDVMDAALRQPLSAFDT--QPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALV 170 (592)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999975 7899999999999999999999999999999988888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 001411 661 VAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGF 740 (1082)
Q Consensus 661 ~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (1082)
+++++|+.++......+..+...++.++...+...++.|+++|+.+||+||.++++.+++.+..++..+...+.....++
T Consensus 171 ~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (592)
T PRK10790 171 AIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGF 250 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888777776677777777777777888899999999999999999999999999999888877776666655544
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCC
Q 001411 741 G-YGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQ 819 (1082)
Q Consensus 741 ~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 819 (1082)
. ..+...+..+...+..+++.. +..|.+++|.++++..+......++..+...+..+.+...+.+|+.++++.+++..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 329 (592)
T PRK10790 251 LLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQY 329 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccC
Confidence 3 233333333332222222333 56889999999988888888899999999999999999999999999987543321
Q ss_pred CCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCc
Q 001411 820 PDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGY 899 (1082)
Q Consensus 820 ~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~ 899 (1082)
.. ...++..+.|+|+||+|+|+. +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+
T Consensus 330 ~~----~~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~ 403 (592)
T PRK10790 330 GN----DDRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGR 403 (592)
T ss_pred CC----CccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCE
Confidence 11 111233567999999999973 357999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 900 DIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 900 di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
|+++++++.+|++|+||||||++|+||||+||.++. +++|++++++++.++++++|+++|+||||.+||+|.+||||||
T Consensus 404 ~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqr 482 (592)
T PRK10790 404 PLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQK 482 (592)
T ss_pred EhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHH
Confidence 999999999999999999999999999999999987 6899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHh
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
|||||||||+++|+|||||||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|+||+
T Consensus 483 QRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~ 562 (592)
T PRK10790 483 QLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLL 562 (592)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hhccchHHHHHHHhhcc
Q 001411 1060 RKENGIYKQLIRLQQDK 1076 (1082)
Q Consensus 1060 ~~~~g~f~~l~~~~~~~ 1076 (1082)
+ +++.|+++++.|...
T Consensus 563 ~-~~~~y~~l~~~~~~~ 578 (592)
T PRK10790 563 A-AQGRYWQMYQLQLAG 578 (592)
T ss_pred h-CCCHHHHHHHHHhhh
Confidence 8 579999999977544
No 22
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.8e-81 Score=769.87 Aligned_cols=511 Identities=32% Similarity=0.526 Sum_probs=464.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHH
Q 001411 558 IFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIV 637 (1082)
Q Consensus 558 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~ 637 (1082)
.++++.++..++.+++.+...+.+.+....+|.++++++++.|.++|+. .+.|++++|+++|++.+...+...+..++
T Consensus 70 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~ 147 (582)
T PRK11176 70 VVIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDK--QSTGTLLSRITYDSEQVASSSSGALITVV 147 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444566677778888888899999999999999999999999999974 78999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHH
Q 001411 638 QNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRIS 717 (1082)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~ 717 (1082)
.+++.+++.++++++++|.+++++++++|+.+++.....+..++..++.++...+..+++.|.++|+++||+||.++.+.
T Consensus 148 ~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~ 227 (582)
T PRK11176 148 REGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVET 227 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHH
Confidence 99999999999999999999999999888888877777777777777888888889999999999999999999999999
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 718 IQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPD 797 (1082)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1082)
++|.+..++..+...+......+...+...+..+...+.++++..++..|.+++|.++.++.+......++..+...+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~ 307 (582)
T PRK11176 228 KRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQ 307 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888888888888888888888899999999999999999988888877788889999999999
Q ss_pred HHHHHHHHHHHHHhhcccccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHH
Q 001411 798 IVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKS 877 (1082)
Q Consensus 798 ~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKS 877 (1082)
+..+..+.+|+.++++.+++.+.. . ...++..+.|+|+||+|+|+++ ++++|+|+||+|+|||++||||+||||||
T Consensus 308 ~~~~~~~~~ri~~~~~~~~~~~~~-~--~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKS 383 (582)
T PRK11176 308 FQRGMAACQTLFAILDLEQEKDEG-K--RVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKS 383 (582)
T ss_pred HHHHHHHHHHHHHHhcCCCcCCCC-C--cCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHH
Confidence 999999999999988754332211 1 1122345679999999999743 46799999999999999999999999999
Q ss_pred HHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCC-CCHHHHHHHHHHhcHHHHH
Q 001411 878 TVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNED-ASEIELMKATKAANAHGFI 956 (1082)
Q Consensus 878 TL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~-~~d~ei~~al~~a~l~~~i 956 (1082)
||+++|+|+|+|++|+|++||+|+++++.+++|++|+||||||++|+|||||||.++.++ ++|++++++++.+++++++
T Consensus 384 TLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i 463 (582)
T PRK11176 384 TIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFI 463 (582)
T ss_pred HHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHH
Confidence 999999999999999999999999999999999999999999999999999999998654 7999999999999999999
Q ss_pred hhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhh
Q 001411 957 SRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIR 1036 (1082)
Q Consensus 957 ~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~ 1036 (1082)
+++|+||||.+||+|.+|||||||||+|||||+++|+|||||||||+||++||+.+.+.|++..+++|+|+||||++++.
T Consensus 464 ~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~ 543 (582)
T PRK11176 464 NKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIE 543 (582)
T ss_pred HhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred ccCEEEEEeCCEEEEecChHHHhhhccchHHHHHHHhhc
Q 001411 1037 NADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQD 1075 (1082)
Q Consensus 1037 ~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~~~ 1075 (1082)
.||+|++|++|+|+|.|+|++|++ +++.|++|++.|.+
T Consensus 544 ~~D~Ii~l~~g~i~e~g~~~~l~~-~~~~y~~l~~~~~~ 581 (582)
T PRK11176 544 KADEILVVEDGEIVERGTHAELLA-QNGVYAQLHKMQFG 581 (582)
T ss_pred hCCEEEEEECCEEEEeCCHHHHHh-CCChHHHHHHHHhc
Confidence 999999999999999999999998 57999999987643
No 23
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.4e-81 Score=783.43 Aligned_cols=547 Identities=25% Similarity=0.409 Sum_probs=476.1
Q ss_pred cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 506 AAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLT 585 (1082)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 585 (1082)
+++++.+...++++++..+.....++.+..+++....... ......+..+++++.++..++.+++.++..+.+.++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (694)
T TIGR03375 143 KESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA---FETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGKKAD 219 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc---HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444445555554432211 1112233344445556677888889999999999999
Q ss_pred HHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 586 ARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASL 665 (1082)
Q Consensus 586 ~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 665 (1082)
.++|..+++++++.|++| + +.++|++++|+ +|++.+++.+...+...+.+++.+++.++++++++|.+++++++++
T Consensus 220 ~~l~~~~~~~ll~l~~~~-~--~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~ 295 (694)
T TIGR03375 220 LILSAKLFERVLGLRMEA-R--PASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPLVAI 295 (694)
T ss_pred HHHHHHHHHHHhCCCccc-C--CCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 999999999999999998 4 36999999999 7999999999988888888888888888888999999999999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 001411 666 PLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVS 745 (1082)
Q Consensus 666 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (1082)
|+.+++.+...+..++..++..+...+..+.+.|+++|+++||+|+.|+.+.++|.+..++..+...+......+...+.
T Consensus 296 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (694)
T TIGR03375 296 PLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFA 375 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888888888888888888999999999999999999999999999999999999999998888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCC
Q 001411 746 QLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPAS 825 (1082)
Q Consensus 746 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~ 825 (1082)
..+..+..++.+|+|+.++..|.+++|.++++..+......++..+...+..+.....+.+|+.++++.+++.+... ..
T Consensus 376 ~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~-~~ 454 (694)
T TIGR03375 376 QFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGT-RF 454 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CC
Confidence 88888888889999999999999999999999988888999999999999999999999999999998765432211 11
Q ss_pred cccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCC
Q 001411 826 KEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN 905 (1082)
Q Consensus 826 ~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~ 905 (1082)
...++..|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++
T Consensus 455 ~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~ 533 (694)
T TIGR03375 455 LHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQID 533 (694)
T ss_pred CCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCC
Confidence 1122345789999999999742 457999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHH
Q 001411 906 LRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 985 (1082)
Q Consensus 906 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLA 985 (1082)
++++|++|+||||||++|+|||+|||.++.++++++++++|++.++++++|+++|+||||.+||+|.+|||||||||+||
T Consensus 534 ~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalA 613 (694)
T TIGR03375 534 PADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALA 613 (694)
T ss_pred HHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhh
Q 001411 986 RAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 986 RAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++..||+|+||++|+|+|+|+|+||+++
T Consensus 614 Rall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 614 RALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 9999999999999999999999999999999998889999999999999999999999999999999999999874
No 24
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-84 Score=701.61 Aligned_cols=503 Identities=32% Similarity=0.450 Sum_probs=433.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 567 IPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTA 646 (1082)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~ 646 (1082)
+++.-+++++......-..+.+...+|+|+....+.|+-. ..+|+++.-..+..+.+. ++.....++...+.-+..+
T Consensus 273 G~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~--rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va 349 (790)
T KOG0056|consen 273 GFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLN--RRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVA 349 (790)
T ss_pred cchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeec--ccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhh
Confidence 4555667777777788889999999999999999999864 678988888777777666 4554445555555544444
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHh
Q 001411 647 FVIAF-ILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELS 725 (1082)
Q Consensus 647 ~~~~~-~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~ 725 (1082)
++..+ ..+|+.+++++.+..+.+...........++.|++.....+..+.-.+++-+.+|+|-||+|++..++|.+...
T Consensus 350 ~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil 429 (790)
T KOG0056|consen 350 MVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAIL 429 (790)
T ss_pred hhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHH
Confidence 44333 45888888877776666555444444444455566666677778888999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 726 QPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQAL 805 (1082)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 805 (1082)
++++..++....-.+.+.....+..+.......+..+++..+..+.|+++....++....+++.....++..++++..-+
T Consensus 430 ~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDm 509 (790)
T KOG0056|consen 430 KYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDM 509 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhH
Confidence 99999888766666666666665555555556666667778889999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhc
Q 001411 806 GPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMR 885 (1082)
Q Consensus 806 ~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~r 885 (1082)
++++++++++++... .|...+....+|.|+|+||+|.|. |++|||+||||+++||+.+|+|||||+||||++++|+|
T Consensus 510 Enmfdllkee~eVvd-~P~a~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfR 586 (790)
T KOG0056|consen 510 ENMFDLLKEEPEVVD-LPGAPPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFR 586 (790)
T ss_pred HHHHHHhhcCchhhc-CCCCCCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHH
Confidence 999999987766432 223333345689999999999996 67899999999999999999999999999999999999
Q ss_pred cccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccc
Q 001411 886 FYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQS 965 (1082)
Q Consensus 886 l~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt 965 (1082)
|||.++|+|.|||+||+.+..+.||++||+||||.+||++||.+||.|+.|.+++||+.+|++.|++||-|.++|+||+|
T Consensus 587 ffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t 666 (790)
T KOG0056|consen 587 FFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNT 666 (790)
T ss_pred HhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEe
Q 001411 966 HVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQ 1045 (1082)
Q Consensus 966 ~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~ 1045 (1082)
.|||+|-.||||||||+||||++|++|.|++||||||+||..||+.||.++.+..+++|.|+|||||+||.+||.|+|++
T Consensus 667 ~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~ 746 (790)
T KOG0056|consen 667 RVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVIS 746 (790)
T ss_pred hhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecChHHHhhhccchHHHHHHHhhc
Q 001411 1046 QGKVAEIGSHEQLLRKENGIYKQLIRLQQD 1075 (1082)
Q Consensus 1046 ~G~ive~G~~~eLl~~~~g~f~~l~~~~~~ 1075 (1082)
+|+|+|.|+|+||+++++|.|++||+.|+.
T Consensus 747 ~G~IvErG~HeeLl~rdgG~Ya~MWq~qqa 776 (790)
T KOG0056|consen 747 NGRIVERGRHEELLKRDGGAYADMWQAQQA 776 (790)
T ss_pred CCeEeecCcHHHHHhccCCcHHHHHHHHHh
Confidence 999999999999999889999999977653
No 25
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-81 Score=697.94 Aligned_cols=514 Identities=29% Similarity=0.442 Sum_probs=438.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHH
Q 001411 553 DQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADR 632 (1082)
Q Consensus 553 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~ 632 (1082)
...+..|.++.+...++.-++.+++.+..+++.+..-.++|++.++++++||.. ..+|.+.+...+-...+...+...
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~--~~tG~l~~~idRgsraI~~vl~~~ 151 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLS--RGTGALNRIIDRGSRAISFVLSAM 151 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcC--CCcchHHHHHHhhhhHHHHHHHHH
Confidence 345678888899999999999999999999999999999999999999999975 678988888888877777777666
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcC
Q 001411 633 LSIIVQNVALTVTAFVIA-FILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYG 711 (1082)
Q Consensus 633 l~~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~ 711 (1082)
+..++..++-+......+ .-..+..+++.+.++.....+.+.......++.++++++...+.+.+.+++.+.++||+||
T Consensus 152 V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfN 231 (591)
T KOG0057|consen 152 VFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFN 231 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcc
Confidence 666665555444333222 2334444444444444444444455555556677888899999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 001411 712 IEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAET 791 (1082)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1082)
.|++..++|...+.++.+...+....-++.......+.........+++..-+..+.+++|++............++..+
T Consensus 232 nE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~L 311 (591)
T KOG0057|consen 232 NEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFL 311 (591)
T ss_pred cHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHH
Confidence 99999999999999999988888777777777777777777777788888778888999999888777777777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcC
Q 001411 792 LALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQ 871 (1082)
Q Consensus 792 ~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~ 871 (1082)
...+..+.++..-+...+...+...... + ...++...+|.|+|+||+|+|+ |++++|+++||+|++||||||||+
T Consensus 312 g~vyr~~~q~l~Dm~~~~~l~~~~~~i~--~-~~~~i~~~~~~I~F~dV~f~y~--~k~~iL~gvsf~I~kGekVaIvG~ 386 (591)
T KOG0057|consen 312 GSVYRELRQALTDMRTLFILLEVDEDIQ--E-AALPIELFGGSIEFDDVHFSYG--PKRKVLKGVSFTIPKGEKVAIVGS 386 (591)
T ss_pred HHHHHHHHHHHHhHHHHHhhhhhhhhhh--h-ccCCcccCCCcEEEEeeEEEeC--CCCceecceeEEecCCCEEEEECC
Confidence 7777777766666555554432211111 1 0112334567899999999997 566799999999999999999999
Q ss_pred CCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhc
Q 001411 872 SGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAAN 951 (1082)
Q Consensus 872 sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~ 951 (1082)
|||||||++++|+||++ ++|+|+|||+||++++++.+|+.|||||||.+||++||-+||.||++.+++||+.++||+++
T Consensus 387 nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~ 465 (591)
T KOG0057|consen 387 NGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAG 465 (591)
T ss_pred CCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcC
Confidence 99999999999999999 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecC
Q 001411 952 AHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHR 1031 (1082)
Q Consensus 952 l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHr 1031 (1082)
+||.|.++|+||+|.|||+|..||||||||++||||+|++|+|+++|||||+||.+||+.|.++|.....++|+|+|+||
T Consensus 466 ~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~ 545 (591)
T KOG0057|consen 466 LHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHR 545 (591)
T ss_pred cHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred chhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHHHHHhhc
Q 001411 1032 LSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQD 1075 (1082)
Q Consensus 1032 l~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~~~ 1075 (1082)
++++.+||+|+|||+|+|+|+|+|+||++ +++.|+.+|..|..
T Consensus 546 l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~~~ 588 (591)
T KOG0057|consen 546 LDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQTS 588 (591)
T ss_pred chhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccccc
Confidence 99999999999999999999999999999 89999999987653
No 26
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.2e-80 Score=774.20 Aligned_cols=557 Identities=29% Similarity=0.434 Sum_probs=485.1
Q ss_pred chhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 507 AEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTA 586 (1082)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 586 (1082)
++++.+...++.+++..+.....++.+..+++....... ......+..+++++.++..++.+++.++....+.++..
T Consensus 136 ~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~---~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 212 (694)
T TIGR01846 136 RYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG---LSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTSRIDV 212 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333444455555554432211 11233344555666667788889999999999999999
Q ss_pred HHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 587 RVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLP 666 (1082)
Q Consensus 587 ~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p 666 (1082)
++|.++++++++.|++||+. +++|++++|+ +|++.+++.+...+...+.+++.+++.++++++++|.+++++++++|
T Consensus 213 ~l~~~~~~~l~~l~~~~f~~--~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~ 289 (694)
T TIGR01846 213 ELGARLYRHLLGLPLGYFES--RRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSLV 289 (694)
T ss_pred HHHHHHHHHHHcCCHHHcCC--CCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999975 8999999999 69999999998888888877777777788899999999999999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 001411 667 LLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQ 746 (1082)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (1082)
+++++.++..+..++..++..+...+..+++.|+++|+++||+||.++.+.++|.+..++..+...+......+...+..
T Consensus 290 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (694)
T TIGR01846 290 CYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIE 369 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888877777777777777777888899999999999999999999999999999999999999988888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCc
Q 001411 747 LLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASK 826 (1082)
Q Consensus 747 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~ 826 (1082)
++..+..++.+|+|.+++..|.++.|.++++..+......++..+...+..+..+..+.+|+.++++.+++.+.. ...
T Consensus 370 ~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~--~~~ 447 (694)
T TIGR01846 370 LIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA--GLA 447 (694)
T ss_pred HHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC--CCC
Confidence 888888889999999999999999999999888888889999999999999999999999999998765543221 111
Q ss_pred ccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCH
Q 001411 827 EVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL 906 (1082)
Q Consensus 827 ~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~ 906 (1082)
..+...|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.
T Consensus 448 ~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~ 526 (694)
T TIGR01846 448 ALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADP 526 (694)
T ss_pred CCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCH
Confidence 122345789999999999733 3579999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
+++|++|+||||||++|+|||||||.++.++++++++++|++.+++++++.++|+||||.++++|.+||||||||++|||
T Consensus 527 ~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lAR 606 (694)
T TIGR01846 527 AWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIAR 606 (694)
T ss_pred HHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999988889999999999999999999999999999999999999999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccchH
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIY 1066 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f 1066 (1082)
|++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++++..||+|+||++|+|+|.|+|++|++ ++|.|
T Consensus 607 all~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~-~~~~y 685 (694)
T TIGR01846 607 ALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLA-LQGLY 685 (694)
T ss_pred HHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHH-cCChH
Confidence 99999999999999999999999999999999888999999999999999999999999999999999999998 57999
Q ss_pred HHHHHHh
Q 001411 1067 KQLIRLQ 1073 (1082)
Q Consensus 1067 ~~l~~~~ 1073 (1082)
++|++.|
T Consensus 686 ~~l~~~~ 692 (694)
T TIGR01846 686 ARLWQQQ 692 (694)
T ss_pred HHHHHhh
Confidence 9999865
No 27
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-80 Score=686.57 Aligned_cols=503 Identities=25% Similarity=0.377 Sum_probs=427.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 001411 561 GLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNV 640 (1082)
Q Consensus 561 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~ 640 (1082)
++++...+..++..++.+.+..++...+|.++|+++...+..-.. ...+|+++||++.|++.+|+.+-..+...+..+
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~--r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~ 143 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLL--RYRSGDLLNRLVADVDALDNLYLRVIAPAVVAL 143 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHH--hcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHH
Confidence 466777788888888999999999999999999999887766554 367999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHH
Q 001411 641 ALTVTAFVIAFILSWRLAAVVAASLP-LLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQ 719 (1082)
Q Consensus 641 ~~~~~~~~~~~~~~~~l~~~~l~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~ 719 (1082)
....+..+...+++|.+++.+..++. +++++.++..++-++..+..+.......+++.|.+.|....+.||.++.+.+.
T Consensus 144 ~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~ 223 (573)
T COG4987 144 VLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTA 223 (573)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHH
Confidence 77777777777888888765554433 33344555666677777888888889999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 001411 720 FASELSQPNKQALLRGHISGFGYGVSQLLSLCSYA-LGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETL-ALAPD 797 (1082)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 797 (1082)
+.+..+...+.+.+...+..|.....+++..+... ..+|.+. .+..|..+......+++..+....++..+. .....
T Consensus 224 l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~-~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~ 302 (573)
T COG4987 224 LEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAA-QVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQH 302 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHH
Confidence 99999999999999999999988888887776666 5555554 233444443222222222222222222222 33456
Q ss_pred HHHHHHHHHHHHHhhcccccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHH
Q 001411 798 IVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKS 877 (1082)
Q Consensus 798 ~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKS 877 (1082)
..+...+..|+.++.+.+++...+.++ .+...-.++++||||+|+++ +.++|+|+||++++||||||+||||||||
T Consensus 303 lgq~~~Sa~Rl~~i~~q~~e~~~~~~~---~~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKS 378 (573)
T COG4987 303 LGQVIASARRLNDILDQKPEVTFPDEQ---TATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKS 378 (573)
T ss_pred hhHHHHHHHHHhhhccCCcccCCCccc---cCCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHH
Confidence 667788899999988877665443111 11111179999999999854 55899999999999999999999999999
Q ss_pred HHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHh
Q 001411 878 TVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFIS 957 (1082)
Q Consensus 878 TL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~ 957 (1082)
|++++|.|.|+|++|+|..+|++++.++.+++|+.|++++|.++||++|+|+||..++|++||||+|+++++++++++++
T Consensus 379 TllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~ 458 (573)
T COG4987 379 TLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLE 458 (573)
T ss_pred HHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc
Q 001411 958 RMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN 1037 (1082)
Q Consensus 958 ~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~ 1037 (1082)
+.|+||+|++||+|.+||||||||++|||+||++.|++||||||.+||++||++|.+.|.+..+|+|+|+||||+..++.
T Consensus 459 ~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~ 538 (573)
T COG4987 459 SAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLER 538 (573)
T ss_pred hChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEeCCEEEEecChHHHhhhccchHHHHHH
Q 001411 1038 ADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIR 1071 (1082)
Q Consensus 1038 ~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~~ 1071 (1082)
||||+|||+|+++|+|+|.+|++ ++|.|++|++
T Consensus 539 ~drIivl~~Gkiie~G~~~~Ll~-~~g~~~~l~q 571 (573)
T COG4987 539 MDRIIVLDNGKIIEEGTHAELLA-NNGRYKRLYQ 571 (573)
T ss_pred cCEEEEEECCeeeecCCHHhhhc-cccHHHHHhc
Confidence 99999999999999999999998 6899999975
No 28
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.3e-79 Score=752.85 Aligned_cols=562 Identities=33% Similarity=0.537 Sum_probs=499.3
Q ss_pred HHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 502 LKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMG 581 (1082)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 581 (1082)
+.+.+..++.++++.++.++.++..+..++.+..++...+.... ......+..+++++.++..++.+++.++..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 82 (571)
T TIGR02203 6 WSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD---RSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVS 82 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344555666666666666666666666666666654443221 112233444566777777888889999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 582 EHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVV 661 (1082)
Q Consensus 582 ~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 661 (1082)
.++...+|..+++++++.|.++|+. .+.|++++|+++|++.+++.+...+..++.+++.+++.++++++++|.+++++
T Consensus 83 ~~~~~~lr~~l~~~~~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~ 160 (571)
T TIGR02203 83 NKVVRDIRVRMFEKLLGLPVSFFDR--QPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIV 160 (571)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9999999999999999999999974 78999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 001411 662 AASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFG 741 (1082)
Q Consensus 662 l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1082)
+++.|+.+++.++..+..+....+..+...+..+.+.|.++|+.+||+++.++++.++|.+..++..+...+......+.
T Consensus 161 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (571)
T TIGR02203 161 VVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSIS 240 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888888888888888888999999999999999999999999999999999999999888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCC
Q 001411 742 YGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPD 821 (1082)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~ 821 (1082)
..+...+..+...+.+++|..++..|.+++|.++++..+......++..+...+..+..+..+.+|+.++++.+++.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 320 (571)
T TIGR02203 241 SPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG 320 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 88888888888889999999999999999999999999999999999999999999999999999999998765442211
Q ss_pred CCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccC
Q 001411 822 DPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDI 901 (1082)
Q Consensus 822 ~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di 901 (1082)
. ....+..+.|+|+||+|+|+++ +.++|+|+||+|+|||+++|+|+||||||||+++|+|+|+|++|+|++||+|+
T Consensus 321 ~---~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i 396 (571)
T TIGR02203 321 T---RAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDL 396 (571)
T ss_pred C---CCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeH
Confidence 1 1112345679999999999743 45799999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcceEEEcccCccccccHHHHhccCCC-CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 902 RTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNE-DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 902 ~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~-~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
++++.+++|++++||||||++|+|||||||.++.+ +.+|++++++++.+++++++.++|+||||.+|++|.+|||||||
T Consensus 397 ~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQ 476 (571)
T TIGR02203 397 ADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQ 476 (571)
T ss_pred HhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHH
Confidence 99999999999999999999999999999999876 79999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhh
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|||||||++++|+|||||||||+||++|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|+++++
T Consensus 477 RiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~ 556 (571)
T TIGR02203 477 RLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLA 556 (571)
T ss_pred HHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999998
Q ss_pred hccchHHHHHHHh
Q 001411 1061 KENGIYKQLIRLQ 1073 (1082)
Q Consensus 1061 ~~~g~f~~l~~~~ 1073 (1082)
.++.|+++++.+
T Consensus 557 -~~~~~~~~~~~~ 568 (571)
T TIGR02203 557 -RNGLYAQLHNMQ 568 (571)
T ss_pred -cCCHHHHHHHHh
Confidence 478999998765
No 29
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=7.3e-79 Score=745.76 Aligned_cols=565 Identities=28% Similarity=0.415 Sum_probs=473.7
Q ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 498 IWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFY 577 (1082)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 577 (1082)
++++..+.++.++.+.+.++..++..+.....++.+..+++...... ....+..+++++.++..+..++..++.
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (588)
T PRK13657 7 YARVLQYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKG------DIFPLLAAWAGFGLFNIIAGVLVARHA 80 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444555555555555555555555555566666665543321 111222333333333333444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 578 TLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRL 657 (1082)
Q Consensus 578 ~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 657 (1082)
.+...+...+++.++++++++.|..+|+. .+.|++++|+++|++.+...+...+..++..++..++.+++++.++|.+
T Consensus 81 ~~~~~~~~~~l~~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 158 (588)
T PRK13657 81 DRLAHRRRLAVLTEYFERIIQLPLAWHSQ--RGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRL 158 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHCc--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555666667779999999999999974 7999999999999999998888888888888888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHH
Q 001411 658 AAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHI 737 (1082)
Q Consensus 658 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (1082)
++++++++|+.+++.....+..+....+..+...+..+++.|.++|+++||+||.++.+.+++.+..++..+...+....
T Consensus 159 ~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (588)
T PRK13657 159 SLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSW 238 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888777666666666666677777788889999999999999999999999999999999998888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 001411 738 SGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTA 817 (1082)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 817 (1082)
..+...+.+++..+...+.+++|.+++..|.+++|.++++..+......++..+...+..+..+..+.+|+.++++.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~ 318 (588)
T PRK13657 239 WALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPD 318 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 77777788888888888899999999999999999999988888888888888888899999999999999998775443
Q ss_pred CCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEC
Q 001411 818 IQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLID 897 (1082)
Q Consensus 818 ~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~id 897 (1082)
.+.. +......+..+.|+|+||+|+|++ +.++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|.+|
T Consensus 319 ~~~~-~~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~ 395 (588)
T PRK13657 319 VRDP-PGAIDLGRVKGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILID 395 (588)
T ss_pred cCCC-CCCCCcCCCCCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEEC
Confidence 2111 111111223467999999999973 3469999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChh
Q 001411 898 GYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGG 977 (1082)
Q Consensus 898 G~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgG 977 (1082)
|+|+++++.+++|++|+||||||.+|+|||||||.++.++.+|++++++++.+++++++.++|+|+||.++++|.+||||
T Consensus 396 g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgG 475 (588)
T PRK13657 396 GTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGG 475 (588)
T ss_pred CEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHH
Confidence 99999999999999999999999999999999999988889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHH
Q 001411 978 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQ 1057 (1082)
Q Consensus 978 QrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~e 1057 (1082)
|||||||||||+++|+|||||||||+||++|++.|.+.|++..+++|+|+||||+++++.||+|++|++|+++|.|+|++
T Consensus 476 q~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~ 555 (588)
T PRK13657 476 ERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDE 555 (588)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998878999999999999999999999999999999999999
Q ss_pred HhhhccchHHHHHHHhh
Q 001411 1058 LLRKENGIYKQLIRLQQ 1074 (1082)
Q Consensus 1058 Ll~~~~g~f~~l~~~~~ 1074 (1082)
|++ +++.|++|++.+.
T Consensus 556 l~~-~~~~y~~l~~~~~ 571 (588)
T PRK13657 556 LVA-RGGRFAALLRAQG 571 (588)
T ss_pred HHH-CCChHHHHHHHhh
Confidence 998 5799999998664
No 30
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.1e-78 Score=744.69 Aligned_cols=563 Identities=33% Similarity=0.542 Sum_probs=484.8
Q ss_pred hcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 505 NAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHL 584 (1082)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 584 (1082)
.+..++.+.+.+++.++.++.....++.+..+++..+.... ......+..+++++.++..+..+++.++..+.+.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (576)
T TIGR02204 13 VRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS---SGLLNRYFAFLLVVALVLALGTAARFYLVTWLGERV 89 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555555555555555566666666665442211 112223344455555556667778888889999999
Q ss_pred HHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 585 TARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAAS 664 (1082)
Q Consensus 585 ~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 664 (1082)
...+|..+++++++.|.++|+. .+.|++++|+++|++.+++.+...+..++..++.+++++++++.++|.+++++++.
T Consensus 90 ~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 167 (576)
T TIGR02204 90 VADIRRAVFAHLISLSPSFFDK--NRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLA 167 (576)
T ss_pred HHHHHHHHHHHHHcCCHHHHcc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999999999975 67999999999999999999998898989999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 001411 665 LPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGV 744 (1082)
Q Consensus 665 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (1082)
+|+.++..++..+..++..++..+...+..+++.|.++|+++||+|+.++++.++|.+..++..+...+......+...+
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (576)
T TIGR02204 168 VPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAI 247 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888777777777777777888888888999999999999999999999999999999998888877777777776666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCC
Q 001411 745 SQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPA 824 (1082)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~ 824 (1082)
...+.++..++.+++|.+++..|.++.|.++++..+......++..+...+..+..+..+.+|+.++++.+++.+.....
T Consensus 248 ~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~ 327 (576)
T TIGR02204 248 VIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHP 327 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCC
Confidence 66666677778888999999999999999988888888888899999999999999999999999998765432211111
Q ss_pred CcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCC
Q 001411 825 SKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL 904 (1082)
Q Consensus 825 ~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i 904 (1082)
.....+..+.|+|+||+|+|+.+++.++|+|+||+|+|||+++|+|+||||||||+++|+|+|+|++|+|.+||+|++++
T Consensus 328 ~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~ 407 (576)
T TIGR02204 328 KTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQL 407 (576)
T ss_pred ccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhc
Confidence 11112234679999999999854336799999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHH
Q 001411 905 NLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 905 ~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaL 984 (1082)
+.+++|++|+|+||||++|+|||||||.++.|+.+|++++++++.+++.++++++|+|+||+++++|.+||||||||++|
T Consensus 408 ~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~l 487 (576)
T TIGR02204 408 DPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAI 487 (576)
T ss_pred CHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHH
Confidence 99999999999999999999999999999888889999999999999999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccc
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENG 1064 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g 1064 (1082)
|||++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|++ +++
T Consensus 488 aRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~-~~~ 566 (576)
T TIGR02204 488 ARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIA-KGG 566 (576)
T ss_pred HHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHH-cCC
Confidence 9999999999999999999999999999999999888999999999999999999999999999999999999998 689
Q ss_pred hHHHHHHHh
Q 001411 1065 IYKQLIRLQ 1073 (1082)
Q Consensus 1065 ~f~~l~~~~ 1073 (1082)
.|++|++.|
T Consensus 567 ~~~~l~~~~ 575 (576)
T TIGR02204 567 LYARLARLQ 575 (576)
T ss_pred hHHHHHhhc
Confidence 999999765
No 31
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=3.9e-79 Score=740.09 Aligned_cols=517 Identities=23% Similarity=0.279 Sum_probs=436.5
Q ss_pred cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 506 AAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQV--ALIFVGLAVVTIPVYLLQHYFYTLMGEH 583 (1082)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 583 (1082)
+++++.+.+..++.++..+.....++.+..+++....... ....+ ...++++.++..++.++..++....+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (529)
T TIGR02868 9 QPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP-----VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALR 83 (529)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444455555555554332110 11111 1112234455667777888888899999
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 584 LTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAA 663 (1082)
Q Consensus 584 ~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 663 (1082)
+..++|.++++++++.|.+||+. +++|++++|+++|++.++..+...+..++..++.++++++++++++|.+++++++
T Consensus 84 ~~~~lr~~~~~~ll~~~~~~~~~--~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~ 161 (529)
T TIGR02868 84 SLGRLRVRVYDRLARLALAGRRR--FQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAA 161 (529)
T ss_pred HHHHHHHHHHHHhhccCcccccc--CChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 99999999999999999999974 7899999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHH-HHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 001411 664 SLPLLIGAFVA-EQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGY 742 (1082)
Q Consensus 664 ~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (1082)
.+|++.++... ..+..+...++.++...+..+++.|.++|+++||+|++++.+.++|.+..++..+...+.....++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (529)
T TIGR02868 162 GLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGA 241 (529)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777655433 33444555566667778888999999999999999999999999999999999998888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCC
Q 001411 743 GVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDD 822 (1082)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~ 822 (1082)
.+..++..+..++.+|+|..++..|.++.|.+++++.+......++..+...+..+..+..+.+|+.++++.+++.+..+
T Consensus 242 ~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~ 321 (529)
T TIGR02868 242 AAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGV 321 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCC
Confidence 88888888888888999999999999999999888888888888888888888999999999999999987655422111
Q ss_pred CC-CcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccC
Q 001411 823 PA-SKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDI 901 (1082)
Q Consensus 823 ~~-~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di 901 (1082)
.. ....++..+.|+|+||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|+
T Consensus 322 ~~~~~~~~~~~~~I~~~~vsf~Y~~--~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i 399 (529)
T TIGR02868 322 VPAAGALGLGKPTLELRDLSFGYPG--SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSV 399 (529)
T ss_pred CCCCcccCCCCceEEEEEEEEecCC--CCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEh
Confidence 11 1111233567999999999974 34699999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHH
Q 001411 902 RTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 981 (1082)
Q Consensus 902 ~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 981 (1082)
+++ .+++|++|+||||||+||+|||||||.+|.|+++|+++++|++.++++++|.++|+||||++||+|.+||||||||
T Consensus 400 ~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQR 478 (529)
T TIGR02868 400 SSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQR 478 (529)
T ss_pred hhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCc
Q 001411 982 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRL 1032 (1082)
Q Consensus 982 laLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl 1032 (1082)
||||||++++|+|||||||||+||++||+.|++.+++..+++|+|+||||+
T Consensus 479 iaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 479 LALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 999999999999999999999999999999999999988899999999996
No 32
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.9e-80 Score=746.51 Aligned_cols=436 Identities=38% Similarity=0.567 Sum_probs=409.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 001411 5 HALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEA 84 (1082)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 84 (1082)
..+-++..+++.++++++++|.|++++++.+|++++...++.+.+++..++..+..++.++.+.|+++|+++||+.+.|.
T Consensus 273 ~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~ 352 (709)
T COG2274 273 TLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEP 352 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhH
Confidence 34455666677788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 85 KAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPN 164 (1082)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~ 164 (1082)
.+..+|++...+..+...+..........+..++..+..++++|+|+++|++|.+|+|.++++.+.......|+..+...
T Consensus 353 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~ 432 (709)
T COG2274 353 RFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQL 432 (709)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888876666667899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCC
Q 001411 165 LAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGS 244 (1082)
Q Consensus 165 ~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGs 244 (1082)
+..+++++.+.+|+.++++.++|.+.. ......++..++|+++||+|+|+.++.++|+|+||+|+|||++||||+|||
T Consensus 433 ~~~~q~~~~~~~rL~dil~~~~E~~~~--~~~~~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGs 510 (709)
T COG2274 433 WTDFQQAKVALERLGDILDTPPEQEGD--KTLIHLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGS 510 (709)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccccc--cccccccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCC
Confidence 999999999999999999887764311 112344566789999999999987655799999999999999999999999
Q ss_pred cHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHH
Q 001411 245 GKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHS 324 (1082)
Q Consensus 245 GKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~ 324 (1082)
|||||+|+|+|+|+|++|+|++||.|++++++.++|++||||+||+.||+|||+|||+++.|+.++|++.+||+.+++|+
T Consensus 511 GKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~ 590 (709)
T COG2274 511 GKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHE 590 (709)
T ss_pred CHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccc
Q 001411 325 FVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLST 404 (1082)
Q Consensus 325 ~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~ 404 (1082)
||.++|.||+|.+||+|.+||||||||++|||||+++|+||||||||||||+++|+.+.+.|.++.+++|+|+||||+++
T Consensus 591 fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~t 670 (709)
T COG2274 591 FIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLST 670 (709)
T ss_pred HHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHhh
Q 001411 405 VRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQ 442 (1082)
Q Consensus 405 ~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 442 (1082)
+++||||+||++|+|+++|+|+|+++.+|.|++++..|
T Consensus 671 i~~adrIiVl~~Gkiv~~gs~~ell~~~g~y~~l~~~q 708 (709)
T COG2274 671 IRSADRIIVLDQGKIVEQGSHEELLAQGGLYARLYQQQ 708 (709)
T ss_pred hhhccEEEEccCCceeccCCHHHHHHhcChHHHHHhcc
Confidence 99999999999999999999999999999999998643
No 33
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=8.3e-79 Score=794.21 Aligned_cols=570 Identities=29% Similarity=0.472 Sum_probs=501.4
Q ss_pred hhHHHHHHHh-cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 496 PSIWELLKLN-AAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQH 574 (1082)
Q Consensus 496 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 574 (1082)
.+++.++++. +.++..++++++++++.++..|+++.++..++..+... .....+.+.+++++++.+++.+++.
T Consensus 45 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~ 118 (1466)
T PTZ00265 45 IPFFLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLG------ENVNDIIFSLVLIGIFQFILSFISS 118 (1466)
T ss_pred ccHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666654 34566777888888889999999999999888876422 1123345566677777888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 575 YFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILS 654 (1082)
Q Consensus 575 ~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 654 (1082)
++..+.+.+...++|.++|++++++|++|||. ++.|.+++|++.|++.++..+...+..++..++.++++++++++++
T Consensus 119 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~--~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~s 196 (1466)
T PTZ00265 119 FCMDVVTTKILKTLKLEFLKSVFYQDGQFHDN--NPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKN 196 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999986 6889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHH
Q 001411 655 WRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLR 734 (1082)
Q Consensus 655 ~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (1082)
|.+++++++++|+++++.++..+..+...++.++...+..+.+.|++.|+++||+|+.|+.+.++|.+..+...+...+.
T Consensus 197 w~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~ 276 (1466)
T PTZ00265 197 ARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKA 276 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888888887777777777788999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 735 GHISGFGYGVSQLLSLCSYALGLWYASVLIKQK--------GSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALG 806 (1082)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 806 (1082)
....++..++..++.++.+++.+|+|.+++..| .++.|.+++.+.........+..+...+..+..+..+.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ 356 (1466)
T PTZ00265 277 NFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATN 356 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888888999999999999999875 467788777766665555566666777888899999999
Q ss_pred HHHHhhcccccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcc
Q 001411 807 PVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRF 886 (1082)
Q Consensus 807 ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl 886 (1082)
|++++++.+++.++.. ..... +..+.|+|+||+|+|+.+++.++|+|+||+|+|||++||||+||||||||+++|.|+
T Consensus 357 ri~~ii~~~~~~~~~~-~~~~~-~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl 434 (1466)
T PTZ00265 357 SLYEIINRKPLVENND-DGKKL-KDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERL 434 (1466)
T ss_pred HHHHHHcCCCCCCCCC-CCccC-CCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHh
Confidence 9999998766543211 11111 122479999999999865556799999999999999999999999999999999999
Q ss_pred ccCCccEEEE-CCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCC-----------------------------
Q 001411 887 YDPISGTVLI-DGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNE----------------------------- 936 (1082)
Q Consensus 887 ~~p~~G~I~i-dG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~----------------------------- 936 (1082)
|+|++|+|++ ||+|+++++.+++|++|+||||+|.||++||+|||.++..
T Consensus 435 ~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (1466)
T PTZ00265 435 YDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSC 514 (1466)
T ss_pred ccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccc
Confidence 9999999999 5799999999999999999999999999999999998631
Q ss_pred ----------------------------CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHH
Q 001411 937 ----------------------------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAI 988 (1082)
Q Consensus 937 ----------------------------~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAl 988 (1082)
+.+|+++++|++.+++++|+.++|+||||.+|++|.+|||||||||+|||||
T Consensus 515 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAl 594 (1466)
T PTZ00265 515 RAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAI 594 (1466)
T ss_pred cccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhccCEEEEEeCC-------------------
Q 001411 989 LKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRNADKIAVLQQG------------------- 1047 (1082)
Q Consensus 989 L~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G------------------- 1047 (1082)
+++|+|||||||||+||+++++.|++.|++.. +++|+|+||||+++++.||+|+||++|
T Consensus 595 l~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~ 674 (1466)
T PTZ00265 595 IRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDN 674 (1466)
T ss_pred hcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccccc
Confidence 99999999999999999999999999999985 489999999999999999999999986
Q ss_pred ----------------------------EEEEecChHHHhhhccchHHHHHHHhhc
Q 001411 1048 ----------------------------KVAEIGSHEQLLRKENGIYKQLIRLQQD 1075 (1082)
Q Consensus 1048 ----------------------------~ive~G~~~eLl~~~~g~f~~l~~~~~~ 1075 (1082)
+|+|+|+|+||++.++|.|+.|++.|..
T Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~ 730 (1466)
T PTZ00265 675 KENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKV 730 (1466)
T ss_pred cccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcc
Confidence 5999999999997669999999988754
No 34
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=5.8e-78 Score=733.58 Aligned_cols=566 Identities=28% Similarity=0.380 Sum_probs=478.2
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 499 WELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYT 578 (1082)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 578 (1082)
++++++.+++++.+.+.+++.++..+.....++.+..+++..+.... ...+..+++++.++..+..++..++..
T Consensus 8 ~~l~~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (585)
T TIGR01192 8 VRALSYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD------VLPTLALWAGFGVFNTIAYVLVAREAD 81 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555666666666666666666666677777777766543211 011222222233334444444555555
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 579 LMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLA 658 (1082)
Q Consensus 579 ~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 658 (1082)
....++..++|.++|+++++.|++||+. +++|++++|+++|++.+...+...+..++..++.+++.+++++.++|.++
T Consensus 82 ~~~~~~~~~lr~~~~~~l~~l~~~~~~~--~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 159 (585)
T TIGR01192 82 RLAHGRRATLLTEAFGRIISMPLSWHQQ--RGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLS 159 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666667777789999999999999985 78999999999999999999988888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 001411 659 AVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHIS 738 (1082)
Q Consensus 659 ~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (1082)
+++++++|+.+++.....+..+...++......+..+++.|+++|+++||+||.++.+.+++.+..++..+...+..+..
T Consensus 160 li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (585)
T TIGR01192 160 IVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWW 239 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999989888777777666666666667777888899999999999999999999999999999998888877777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC
Q 001411 739 GFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAI 818 (1082)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 818 (1082)
++...+...+..+..++.+++|.+++..|.++.|.++++..+......++..+...+..+..+..+.+|+.++++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~ 319 (585)
T TIGR01192 240 ALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQR 319 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 77777777777777888899999999999999999998888888888888888888999999999999999988754432
Q ss_pred CCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECC
Q 001411 819 QPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDG 898 (1082)
Q Consensus 819 ~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG 898 (1082)
+... .....++..+.|+|+||+|+|++ +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||
T Consensus 320 ~~~~-~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g 396 (585)
T TIGR01192 320 EEPA-DAPELPNVKGAVEFRHITFEFAN--SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDG 396 (585)
T ss_pred cCCc-cCCCCCCCCCeEEEEEEEEECCC--CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECC
Confidence 2111 10111223467999999999973 24689999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhH
Q 001411 899 YDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQ 978 (1082)
Q Consensus 899 ~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQ 978 (1082)
+|+++++.+.+|++++||||||.+|++|++|||.++.+++++++++++++.+++++++.++|+|+||.+|++|.+|||||
T Consensus 397 ~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq 476 (585)
T TIGR01192 397 IDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGE 476 (585)
T ss_pred EEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHH
Confidence 99999999999999999999999999999999999888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHH
Q 001411 979 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 979 rQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
|||++|||||+++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|
T Consensus 477 ~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 556 (585)
T TIGR01192 477 RQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQEL 556 (585)
T ss_pred HHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999988889999999999999999999999999999999999999
Q ss_pred hhhccchHHHHHHHhhcc
Q 001411 1059 LRKENGIYKQLIRLQQDK 1076 (1082)
Q Consensus 1059 l~~~~g~f~~l~~~~~~~ 1076 (1082)
++ ++|.|+++++.+...
T Consensus 557 ~~-~~~~y~~l~~~~~~~ 573 (585)
T TIGR01192 557 IQ-KDGRFYKLLRRSGLL 573 (585)
T ss_pred HH-CCChHHHHHHhCccc
Confidence 98 689999999877543
No 35
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.9e-78 Score=735.53 Aligned_cols=516 Identities=28% Similarity=0.418 Sum_probs=458.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHH
Q 001411 554 QVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRL 633 (1082)
Q Consensus 554 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l 633 (1082)
.|.++++++.++..++.++..++....+.+...++|.++++++++.|++||+. +++|++++|+++|++.++..+...+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~g~i~srl~~Dv~~i~~~~~~~~ 114 (569)
T PRK10789 37 MWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLR--HRTGDLMARATNDVDRVVFAAGEGV 114 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC--CCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 34455555556666777788888888999999999999999999999999974 7899999999999999998877777
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCc
Q 001411 634 SIIVQNVALTVTAFVIA-FILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGI 712 (1082)
Q Consensus 634 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~ 712 (1082)
..++..++..+++++++ +.++|.+++++++++|+.+++.....+..++..++.++...+..+.+.|+++|+++||+|++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~ 194 (569)
T PRK10789 115 LTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGL 194 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcc
Confidence 77777766666665555 57999999999999999888777777777777777777788889999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 001411 713 EKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETL 792 (1082)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (1082)
++.+.++|.+..++..+...+.....++...+.+....+...+.+++|.+++..|.++.|.++++..+......++....
T Consensus 195 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~ 274 (569)
T PRK10789 195 EDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALA 274 (569)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888777777777777777777788899999999999999999998888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCC
Q 001411 793 ALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQS 872 (1082)
Q Consensus 793 ~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~s 872 (1082)
..+..+..+..+.+|+.++++.+++.+... ...++..+.|+|+||+|+|+.. +.++|+|+||+|+|||++||+|+|
T Consensus 275 ~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~~~~~~~I~~~~v~~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~s 350 (569)
T PRK10789 275 WMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPVPEGRGELDVNIRQFTYPQT-DHPALENVNFTLKPGQMLGICGPT 350 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCCCCCCCcEEEEEEEEECCCC-CCccccCeeEEECCCCEEEEECCC
Confidence 999999999999999999987654322111 1112335679999999999742 357999999999999999999999
Q ss_pred CCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcH
Q 001411 873 GSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANA 952 (1082)
Q Consensus 873 GSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l 952 (1082)
|||||||+++|+|+|+|++|+|.+||+|+++++.+++|++++||||+|++|++||||||.++.++.++++++++++.+++
T Consensus 351 GsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l 430 (569)
T PRK10789 351 GSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASV 430 (569)
T ss_pred CCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999998888999999999999999
Q ss_pred HHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCc
Q 001411 953 HGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRL 1032 (1082)
Q Consensus 953 ~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl 1032 (1082)
++++.++|+|+||.+|++|.+||||||||++||||++++|+|||||||||+||+++++.+++.|++..+++|+|+||||+
T Consensus 431 ~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~ 510 (569)
T PRK10789 431 HDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRL 510 (569)
T ss_pred HHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999987899999999999
Q ss_pred hhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHHHHHhhcc
Q 001411 1033 STIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQDK 1076 (1082)
Q Consensus 1033 ~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~~~~ 1076 (1082)
+++..||+|++|++|+++|.|+|++|++ +++.|+++++.|...
T Consensus 511 ~~~~~~d~i~~l~~G~i~~~g~~~~l~~-~~~~y~~l~~~~~~~ 553 (569)
T PRK10789 511 SALTEASEILVMQHGHIAQRGNHDQLAQ-QSGWYRDMYRYQQLE 553 (569)
T ss_pred hHHHcCCEEEEEeCCEEEEecCHHHHHH-cCChHHHHHHHhhhc
Confidence 9999999999999999999999999997 579999999877543
No 36
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-79 Score=658.80 Aligned_cols=491 Identities=33% Similarity=0.468 Sum_probs=424.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 001411 575 YFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFV-IAFIL 653 (1082)
Q Consensus 575 ~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~-~~~~~ 653 (1082)
.++...+..+.+.+-.+.|.|+.++.+.|.-. ..+|.+.........-++..+...+...+..++-+....+ ....+
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~--r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~ 81 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLE--RRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVY 81 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhh--cccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 34566677788888899999999999999864 4555544444444444444555555555555554444333 34467
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHH
Q 001411 654 SWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALL 733 (1082)
Q Consensus 654 ~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~ 733 (1082)
+|+.+.+.++++.+.+++.....-..-.+.++.+.+.+++++...+++-+.+|+|.||-|+++..+|...++.+.++..+
T Consensus 82 ~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k 161 (497)
T COG5265 82 GWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIK 161 (497)
T ss_pred ccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHH
Confidence 89998888888888877766655555556778888899999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001411 734 RGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILY 813 (1082)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~ 813 (1082)
....-.++......+...........+...+..|.++.|+++..-.++.....++......+.++.++....++.+++++
T Consensus 162 ~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~ 241 (497)
T COG5265 162 VHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLD 241 (497)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhc
Confidence 77777777777777777777777788888888999999999888777777777887778888889999999999999887
Q ss_pred ccccCCCCCCCCcccc-cccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCcc
Q 001411 814 RKTAIQPDDPASKEVT-EIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISG 892 (1082)
Q Consensus 814 ~~~~~~~~~~~~~~~~-~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G 892 (1082)
.+.+... .+..++.+ -..|.|.|+||+|.|. |..|+|+|+||++++|+++||||+||+||||+.++|+|||++++|
T Consensus 242 ~~~~v~d-~pda~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG 318 (497)
T COG5265 242 VEAEVSD-APDAPPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG 318 (497)
T ss_pred cchhhcc-CCCCccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc
Confidence 6554332 22333444 3468899999999996 567999999999999999999999999999999999999999999
Q ss_pred EEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCC
Q 001411 893 TVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGV 972 (1082)
Q Consensus 893 ~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~ 972 (1082)
.|.|||+||+++..+.+|+.||+||||.+||++|+..|+.+|.|+++++|++.|++.+++++||+++|+||||.|||+|-
T Consensus 319 ~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 319 SITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred eEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEe
Q 001411 973 QLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEI 1052 (1082)
Q Consensus 973 ~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~ 1052 (1082)
.||||||||+||||++|++|+||+||||||+||..||+.||.+|++..+++|.++|||||+||.+||.|+||++|+|+|.
T Consensus 399 klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 399 KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChHHHhhhccchHHHHHH
Q 001411 1053 GSHEQLLRKENGIYKQLIR 1071 (1082)
Q Consensus 1053 G~~~eLl~~~~g~f~~l~~ 1071 (1082)
|+|+||++ .+|.|++||.
T Consensus 479 g~h~~ll~-~~g~ya~mw~ 496 (497)
T COG5265 479 GTHEELLA-AGGLYAEMWR 496 (497)
T ss_pred CcHHHHHH-cCChHHHHhc
Confidence 99999998 5999999995
No 37
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=4.1e-76 Score=713.65 Aligned_cols=525 Identities=23% Similarity=0.330 Sum_probs=449.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 512 AVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLS 591 (1082)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 591 (1082)
+.++++++++.++..+..++.+..+++....... . ......+.+++++++++..++.+++.++..+.+.+...++|.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 82 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAGE-P-LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRER 82 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-C-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555556666666666665432211 1 1223345556666777788888999999999999999999999
Q ss_pred HHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 592 MFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGA 671 (1082)
Q Consensus 592 l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~ 671 (1082)
+++++++.|..||+. .++|++++|+++|++.+++.+...+..++..++.+++.+++++.++|.+++++++++|+..++
T Consensus 83 l~~~l~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~ 160 (529)
T TIGR02857 83 LLAAVAALGPGWLQG--RPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIF 160 (529)
T ss_pred HHHHHHhCCchhhcc--CChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 999999999999974 899999999999999999999988899998888888888999999999999999888888777
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 672 FVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLC 751 (1082)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1082)
.+...+..+...++.++...+..+.+.|+++|+++||+|+.++++.++|.+..++..+...+..+...+...+..++..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (529)
T TIGR02857 161 MILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATL 240 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666776666777777788888999999999999999999999999999999888888777777776666666666665
Q ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccc
Q 001411 752 SYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEI 831 (1082)
Q Consensus 752 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~ 831 (1082)
...+...+++..+..|.+++|.++++..+......++..+...+..+..+..+.+|+.++++.+++.... .....+.
T Consensus 241 ~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~---~~~~~~~ 317 (529)
T TIGR02857 241 SVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGK---APVTAAP 317 (529)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC---cCCCCCC
Confidence 5555555555566689999999988877777778888888889999999999999999998743221111 1111122
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhc
Q 001411 832 KGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRR 911 (1082)
Q Consensus 832 ~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~ 911 (1082)
.+.|+|+||+|+|+++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|+
T Consensus 318 ~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~ 396 (529)
T TIGR02857 318 APSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRD 396 (529)
T ss_pred CCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHh
Confidence 4679999999999843 347999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccC
Q 001411 912 KIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 991 (1082)
Q Consensus 912 ~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~ 991 (1082)
+++||||||++|++||||||.++.++.+|++++++++.++++++++++|+||||.+||+|.+||||||||++||||++++
T Consensus 397 ~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~ 476 (529)
T TIGR02857 397 QIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRD 476 (529)
T ss_pred heEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999998888899999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEE
Q 001411 992 PSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVL 1044 (1082)
Q Consensus 992 ~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl 1044 (1082)
|+|||||||||+||++|++.|++.+++..+++|+|+||||++++..||+|+||
T Consensus 477 ~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 477 APLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999999999988899999999999999999999986
No 38
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3.2e-78 Score=687.86 Aligned_cols=479 Identities=29% Similarity=0.472 Sum_probs=370.0
Q ss_pred cEEEEEEEEECCCCCC--ccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCC----CcEEEECCeeCCCCCHHH
Q 001411 205 QIEFSEVCFAYPSRPH--MVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT----SGKILLDGHDLKSLQLKW 278 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~--~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~----~G~i~~~g~~~~~~~~~~ 278 (1082)
-++++|++..|..... .+++||||++.+||++||||+|||||||+++.|+|+.++. +|+|.++|.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 5899999999965433 3999999999999999999999999999999999999988 899999999998887765
Q ss_pred Hh----hhceEEccCCC-cChh--cHHHHHh----cCCCCC---CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCC
Q 001411 279 LR----EQMGLVSQEPA-LFAT--SIANNIL----LGKEDA---SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQL 344 (1082)
Q Consensus 279 ~~----~~i~~v~Q~~~-l~~~--ti~~ni~----~g~~~~---~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~L 344 (1082)
+| +.|+|++|+|. .+|. ||.+-|. ...... ..++..+.++.+++ |+-... ......|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl-------~~~~~~--~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGL-------PDPERR--DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCC-------CChhhh--ccCCccc
Confidence 53 47999999985 4554 6655554 222111 12233344444433 332222 4456799
Q ss_pred ChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCcccccc-CCEEEEEeCCEEEE
Q 001411 345 SGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVE 421 (1082)
Q Consensus 345 SgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~ 421 (1082)
|||||||+.||+||..+|++||+||||++||+.++++|++.|+++. .+.++|+|||++..+.+ ||||+||++|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999986 47899999999999876 89999999999999
Q ss_pred ecCchhhhhcCc-hhHH-HHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCCCchhHH
Q 001411 422 SGTHVDLISKGG-EYAA-LVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIW 499 (1082)
Q Consensus 422 ~g~~~~l~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (1082)
.|+.++++++.. .|.+ ++..
T Consensus 236 ~G~~~~i~~~p~hpYT~~Ll~a---------------------------------------------------------- 257 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGLLAA---------------------------------------------------------- 257 (539)
T ss_pred ecCHHHHHhccCCcccHHHHhh----------------------------------------------------------
Confidence 999999876421 0100 0000
Q ss_pred HHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 500 ELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTL 579 (1082)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 579 (1082)
T Consensus 258 -------------------------------------------------------------------------------- 257 (539)
T COG1123 258 -------------------------------------------------------------------------------- 257 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 580 MGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAA 659 (1082)
Q Consensus 580 ~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 659 (1082)
.|- .+..+ ..
T Consensus 258 -------------------~p~--~~~~~-~~------------------------------------------------ 267 (539)
T COG1123 258 -------------------VPR--LGDEK-II------------------------------------------------ 267 (539)
T ss_pred -------------------CCC--ccccc-cc------------------------------------------------
Confidence 000 00000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 001411 660 VVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISG 739 (1082)
Q Consensus 660 ~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (1082)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCC
Q 001411 740 FGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQ 819 (1082)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 819 (1082)
......
T Consensus 268 -------------------------------------------------------------------------~~~~~~- 273 (539)
T COG1123 268 -------------------------------------------------------------------------RLPRRG- 273 (539)
T ss_pred -------------------------------------------------------------------------cccccc-
Confidence 000000
Q ss_pred CCCCCCcccccccccEEEEeEEEECCCCC--------CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCc
Q 001411 820 PDDPASKEVTEIKGNIELRNVSFKYPVRP--------DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPIS 891 (1082)
Q Consensus 820 ~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~--------~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~ 891 (1082)
+ .+...-++++|++.+|..+. ...+++||||+|++||++||||+||||||||.++|+|+++|++
T Consensus 274 ~--------~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~ 345 (539)
T COG1123 274 P--------LRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSS 345 (539)
T ss_pred c--------cccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCC
Confidence 0 00122488999999998421 2368999999999999999999999999999999999999999
Q ss_pred cEEEECCcc--CCCCCHHHHhcceEEEcccCcc--c-cccHHHHhccCCC---CCC----HHHHHHHHHHhcHHHHHhhC
Q 001411 892 GTVLIDGYD--IRTLNLRSLRRKIGLVQQEPAL--F-STTIYENIKYGNE---DAS----EIELMKATKAANAHGFISRM 959 (1082)
Q Consensus 892 G~I~idG~d--i~~i~~~~lR~~i~~VpQdp~L--f-~gTIreNl~~~~~---~~~----d~ei~~al~~a~l~~~i~~l 959 (1082)
|+|.++|.| .+.-....+|+++-+|+|||+- - ..||+++|.-... ... .+.+.+.++.+++..-
T Consensus 346 G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~---- 421 (539)
T COG1123 346 GSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPE---- 421 (539)
T ss_pred ceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHH----
Confidence 999999977 3333355688899999999973 2 3699999863211 111 1224444556655431
Q ss_pred cccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc
Q 001411 960 PEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN 1037 (1082)
Q Consensus 960 p~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~ 1037 (1082)
........||||||||+||||||..+|++||+|||||+||+.+.+.|.+.|++..+ |.|.|+|||+++.++.
T Consensus 422 ------~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~ 495 (539)
T COG1123 422 ------FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRY 495 (539)
T ss_pred ------HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHh
Confidence 12334467999999999999999999999999999999999999999999998764 7899999999999987
Q ss_pred -cCEEEEEeCCEEEEecChHHHhhhccchHHHHHHH
Q 001411 1038 -ADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRL 1072 (1082)
Q Consensus 1038 -~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~~~ 1072 (1082)
||||+||++|+|||.|+.+++.+.+...|.+.+-.
T Consensus 496 i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~ 531 (539)
T COG1123 496 IADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLA 531 (539)
T ss_pred hCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHH
Confidence 99999999999999999999999888888887654
No 39
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.5e-74 Score=698.69 Aligned_cols=532 Identities=23% Similarity=0.345 Sum_probs=449.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 513 VLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSM 592 (1082)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 592 (1082)
...+++.++..+.....++.+..+++....... ......+..+++++.++..++.+++.++..+.+.++..++|.++
T Consensus 9 ~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~ 85 (544)
T TIGR01842 9 IIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS---VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPI 85 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444444445555556554432211 11223345555566666778888889999999999999999999
Q ss_pred HHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 593 FSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALAD-RLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGA 671 (1082)
Q Consensus 593 ~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~ 671 (1082)
++++++.|+.. .+...+++++|++.+++.+.. .+..++..++.++ .+++++.++|++++++++.+|++++.
T Consensus 86 ~~~ll~~~~~~-------~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~i 157 (544)
T TIGR01842 86 FAASFSATLRR-------GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVGL 157 (544)
T ss_pred HHHHhcCcccC-------ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 99999999842 245688999999999998876 4444454444443 44677889999999888888877766
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 672 FVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLC 751 (1082)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1082)
.++..+..++..++.++...+..+++.|+++|+++||+||.++.+.++|.+..++..+...+.....+....+...+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (544)
T TIGR01842 158 ALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIV 237 (544)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666677777888888999999999999999999999999999999998888888777777777777777777
Q ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccc
Q 001411 752 SYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEI 831 (1082)
Q Consensus 752 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~ 831 (1082)
...+.+++|.+++..|.++.|.++++..+......++......+..+..+..+.+|+.++++.+++.++. ...++.
T Consensus 238 ~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~----~~~~~~ 313 (544)
T TIGR01842 238 LQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA----MPLPEP 313 (544)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC----CCCCCC
Confidence 7788889999999999999999999988888888999999999999999999999999998765432211 111233
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhc
Q 001411 832 KGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRR 911 (1082)
Q Consensus 832 ~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~ 911 (1082)
.+.|+++||+|+|++. +.++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+.+++.+.+|+
T Consensus 314 ~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~ 392 (544)
T TIGR01842 314 EGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGK 392 (544)
T ss_pred CCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhh
Confidence 4679999999999732 357999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccC
Q 001411 912 KIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 991 (1082)
Q Consensus 912 ~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~ 991 (1082)
+++||||||++|++|++||+.++.+++++++++++++.++++++++++|+|+||.+|++|.+||||||||++||||++++
T Consensus 393 ~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~ 472 (544)
T TIGR01842 393 HIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGD 472 (544)
T ss_pred heEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999987777899999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhh
Q 001411 992 PSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 992 ~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|+|||||||||+||+++++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|++|++
T Consensus 473 ~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 473 PKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999999999875 6899999999999999999999999999999999999975
No 40
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.4e-74 Score=649.13 Aligned_cols=438 Identities=31% Similarity=0.419 Sum_probs=397.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcc
Q 001411 3 TGHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVG 82 (1082)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~ 82 (1082)
+++.+...+..+..++..|+++|.-++++++.+|++.+++.++++..++..+++...+.+..+.+.|.++|+.|+|.|+.
T Consensus 118 LPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~ 197 (559)
T COG4988 118 LPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGR 197 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcc
Confidence 35566666677777888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCChHHHHHHHHHHHHHHHHHHHH
Q 001411 83 EAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRH-GDTNGGKAFTTIINVIFSGFALGQA 161 (1082)
Q Consensus 83 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~-~~l~~g~~~~~~~~~~~~~~~l~~~ 161 (1082)
.+...+++.+..++.++..++.-+..-....+..++.++..+++..+.+....+ |+++....+.+++..--.+.|+..+
T Consensus 198 ~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~l 277 (559)
T COG4988 198 TEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDL 277 (559)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHH
Confidence 999999999999999999999988888888888888888888887777777777 8999887766665555667899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcC
Q 001411 162 APNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGP 241 (1082)
Q Consensus 162 ~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~ 241 (1082)
...++.-+.+.++.+.++.+++.+.+..+. ............+++++|++|.||+.+ ++++|+||++++|++++|||+
T Consensus 278 Gs~fH~~~~g~aa~d~i~~~l~~~~~~~~~-~~~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~talvG~ 355 (559)
T COG4988 278 GSFFHAAAAGEAAADKLFTLLESPVATPGS-GEKAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQLTALVGA 355 (559)
T ss_pred HHHHHHHhhhhhHHHHHHHHhcCCCCCCCC-ccccccccCCCceeeecceEEecCCCC-cccCCceeEecCCcEEEEECC
Confidence 999999999999999999999765543211 110011112233466669999999765 699999999999999999999
Q ss_pred CCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhc
Q 001411 242 SGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAAN 321 (1082)
Q Consensus 242 sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~ 321 (1082)
||||||||+++|+|+++|++|+|.+||+++++++.+.||++++||+|+|+||++|+||||++++++.+++++.++++.++
T Consensus 356 SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~ 435 (559)
T COG4988 356 SGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAG 435 (559)
T ss_pred CCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccC
Q 001411 322 AHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHR 401 (1082)
Q Consensus 322 ~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~ 401 (1082)
+.+++.. |+|+||.+||+|.+|||||+|||+|||||+++++++|||||||+||.+||+.+.+.|.++.+++|+|+||||
T Consensus 436 l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHr 514 (559)
T COG4988 436 LLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHR 514 (559)
T ss_pred HHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcC
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHhhh
Q 001411 402 LSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQS 443 (1082)
Q Consensus 402 ~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 443 (1082)
++.+..+|+|++|++|+++++|+|+++.++++.|++++..|.
T Consensus 515 l~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~~q~ 556 (559)
T COG4988 515 LEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLKQQE 556 (559)
T ss_pred hHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHHHHh
Confidence 999999999999999999999999999999999999997654
No 41
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.9e-74 Score=703.66 Aligned_cols=434 Identities=25% Similarity=0.347 Sum_probs=374.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 001411 5 HALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEA 84 (1082)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 84 (1082)
.++..+..+++.++++++++|.+++++++++|+++++...+.++.++..++.++..++..+.+.|.++|+++||+|++|+
T Consensus 143 ~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~ 222 (588)
T PRK11174 143 QMALAVLVPLLILIAVFPINWAAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGE 222 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccH
Confidence 45556667777788889999999999999999988888888999999889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHH------HHHH---HHHHHHH
Q 001411 85 KAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKA------FTTI---INVIFSG 155 (1082)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~------~~~~---~~~~~~~ 155 (1082)
.+.+++.+..++..+...+..+.......+..++..+..+++++++++.+. |.+|+|.+ +..+ .......
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~ 301 (588)
T PRK11174 223 AETESIRSASEDFRQRTMEVLRMAFLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFY 301 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHH
Confidence 999999998888888777776666655555555555555455555655544 77887753 1111 2222334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCE
Q 001411 156 FALGQAAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKT 235 (1082)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~ 235 (1082)
.|+..+...+..+.+++.+++|+.++++.+++.+ .... ........+.|+++||+|.|+++ +++|+|+||+++|||+
T Consensus 302 ~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~-~~~~-~~~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~ 378 (588)
T PRK11174 302 QPLRDLGTFYHAKAQAVGAAESLVTFLETPLAHP-QQGE-KELASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQR 378 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc-CCCc-cccCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCE
Confidence 6788888889999999999999999997654321 1111 00111123469999999877543 4599999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHH
Q 001411 236 FAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIE 315 (1082)
Q Consensus 236 ~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~ 315 (1082)
+|||||||||||||+++|+|+| |++|+|.+||+|+++++.+++|++|+||||+|+||++||+|||++|+|+.+++++++
T Consensus 379 vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~ 457 (588)
T PRK11174 379 IALVGPSGAGKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQ 457 (588)
T ss_pred EEEECCCCCCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999899999999
Q ss_pred HHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeE
Q 001411 316 AAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTT 395 (1082)
Q Consensus 316 ~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~ 395 (1082)
+|+.+++++++.++|+||||.+||+|.+|||||||||+|||||++||+|||||||||+||+++++.+++.|.++.+++|+
T Consensus 458 al~~a~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~Tv 537 (588)
T PRK11174 458 ALENAWVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTT 537 (588)
T ss_pred HHHHhCHHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred EEEccCccccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHhhh
Q 001411 396 IVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQS 443 (1082)
Q Consensus 396 i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 443 (1082)
|+||||++.++.||+|++|++|+++++|+|+||+++++.|++++..|.
T Consensus 538 IiItHrl~~i~~aD~Iivl~~G~i~e~G~~~eL~~~~~~y~~l~~~q~ 585 (588)
T PRK11174 538 LMVTHQLEDLAQWDQIWVMQDGQIVQQGDYAELSQAGGLFATLLAHRQ 585 (588)
T ss_pred EEEecChHHHHhCCEEEEEeCCeEeecCCHHHHHhcchHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999987654
No 42
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-74 Score=707.17 Aligned_cols=498 Identities=26% Similarity=0.394 Sum_probs=364.2
Q ss_pred cEEEEEEEEECCCC--CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCC----------
Q 001411 205 QIEFSEVCFAYPSR--PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLK---------- 272 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~---------- 272 (1082)
.|+++|++++|+.. ..++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 59999999999632 235999999999999999999999999999999999999999999999997552
Q ss_pred CCCHH---HHh-hhceEEccCC--CcChh-cHHHHHhcCCC---CCCH----HHHHHHHHHhchHHHHhcCCCCcccccc
Q 001411 273 SLQLK---WLR-EQMGLVSQEP--ALFAT-SIANNILLGKE---DASM----DRVIEAAKAANAHSFVEGLPDGYQTQVG 338 (1082)
Q Consensus 273 ~~~~~---~~~-~~i~~v~Q~~--~l~~~-ti~~ni~~g~~---~~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g 338 (1082)
..+.. .+| +.||||+|+| .+++. ||+||+.++.. .... +++.++++..++ ++ .+....
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL-------~~-~~~~~~ 163 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRI-------PE-AQTILS 163 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCC-------CC-hhhHHh
Confidence 12222 233 4799999998 56664 99999987521 1111 223333333322 11 012345
Q ss_pred CCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-C-CCeEEEEccCccccc-cCCEEEEEe
Q 001411 339 EGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-S-NRTTIVVAHRLSTVR-DVDTIMVLK 415 (1082)
Q Consensus 339 ~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~-~~t~i~vtH~~~~~~-~~d~i~~l~ 415 (1082)
....+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.++++. + ++|+|+|||+++.+. .||+|++|+
T Consensus 164 ~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~ 243 (623)
T PRK10261 164 RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243 (623)
T ss_pred CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEee
Confidence 5667899999999999999999999999999999999999999999999885 3 789999999999885 489999999
Q ss_pred CCEEEEecCchhhhhcCc-hhH-HHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCC
Q 001411 416 NGQVVESGTHVDLISKGG-EYA-ALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFA 493 (1082)
Q Consensus 416 ~G~i~~~g~~~~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (1082)
+|++++.|+++++..... .|. .+.... + ....
T Consensus 244 ~G~i~~~g~~~~~~~~~~~~~~~~l~~~~------------------~----------------------~~~~------ 277 (623)
T PRK10261 244 QGEAVETGSVEQIFHAPQHPYTRALLAAV------------------P----------------------QLGA------ 277 (623)
T ss_pred CCeecccCCHHHhhcCCCChhhhhhhhcc------------------C----------------------cccc------
Confidence 999999998877643210 000 000000 0 0000
Q ss_pred CchhHHHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 494 PSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQ 573 (1082)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 573 (1082)
+.. .
T Consensus 278 -----------------------------------------------~~~--~--------------------------- 281 (623)
T PRK10261 278 -----------------------------------------------MKG--L--------------------------- 281 (623)
T ss_pred -----------------------------------------------ccc--c---------------------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 574 HYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFIL 653 (1082)
Q Consensus 574 ~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 653 (1082)
..+-. +... .
T Consensus 282 ------------------------~~~~~-~~~~--~------------------------------------------- 291 (623)
T PRK10261 282 ------------------------DYPRR-FPLI--S------------------------------------------- 291 (623)
T ss_pred ------------------------cCCcc-cccc--c-------------------------------------------
Confidence 00000 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHH
Q 001411 654 SWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALL 733 (1082)
Q Consensus 654 ~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~ 733 (1082)
. ...
T Consensus 292 ------------------------------------------------------------------------~-~~~--- 295 (623)
T PRK10261 292 ------------------------------------------------------------------------L-EHP--- 295 (623)
T ss_pred ------------------------------------------------------------------------c-ccc---
Confidence 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001411 734 RGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILY 813 (1082)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~ 813 (1082)
+ . .
T Consensus 296 -------------------------------------------------------------------------~---~-~ 298 (623)
T PRK10261 296 -------------------------------------------------------------------------A---K-Q 298 (623)
T ss_pred -------------------------------------------------------------------------c---c-c
Confidence 0 0 0
Q ss_pred ccccCCCCCCCCcccccccccEEEEeEEEECCCCC--------CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhc
Q 001411 814 RKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRP--------DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMR 885 (1082)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~--------~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~r 885 (1082)
.+.......+ +...-|+++||+++|+.+. ..++|+||||+|++||++||+|+||||||||+++|.|
T Consensus 299 ~~~~~~~~~~------~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~G 372 (623)
T PRK10261 299 EPPIEQDTVV------DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLR 372 (623)
T ss_pred Cccccccccc------CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHc
Confidence 0000000000 0012499999999996311 2469999999999999999999999999999999999
Q ss_pred cccCCccEEEECCccCCCCCHH---HHhcceEEEcccCc--ccc-ccHHHHhccCC--CC-CCH----HHHHHHHHHhcH
Q 001411 886 FYDPISGTVLIDGYDIRTLNLR---SLRRKIGLVQQEPA--LFS-TTIYENIKYGN--ED-ASE----IELMKATKAANA 952 (1082)
Q Consensus 886 l~~p~~G~I~idG~di~~i~~~---~lR~~i~~VpQdp~--Lf~-gTIreNl~~~~--~~-~~d----~ei~~al~~a~l 952 (1082)
+.+|++|+|.++|.++...+.. .+|++|+||||+|. +++ .|+.+|+..+. .. ... +++.+.++.+++
T Consensus 373 l~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL 452 (623)
T PRK10261 373 LVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGL 452 (623)
T ss_pred CCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCC
Confidence 9999999999999999877643 46789999999983 665 59999986531 11 111 234455555555
Q ss_pred H-HHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEe
Q 001411 953 H-GFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVA 1029 (1082)
Q Consensus 953 ~-~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~Ia 1029 (1082)
. +.. ......||||||||++|||||+.+|+|||||||||+||+.+.+.|.+.|++..+ +.|+|+||
T Consensus 453 ~~~~~-----------~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~is 521 (623)
T PRK10261 453 LPEHA-----------WRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFIS 521 (623)
T ss_pred CHHHh-----------hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 2 222 223457999999999999999999999999999999999999999999998753 78999999
Q ss_pred cCchhhhc-cCEEEEEeCCEEEEecChHHHhhhccchHHH-HHHH
Q 001411 1030 HRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKENGIYKQ-LIRL 1072 (1082)
Q Consensus 1030 Hrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~-l~~~ 1072 (1082)
|+++.+.. ||||+||++|+|+|.|+++++..++...|.+ +++.
T Consensus 522 Hdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~~ 566 (623)
T PRK10261 522 HDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMAA 566 (623)
T ss_pred CCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHhh
Confidence 99999976 9999999999999999999998765556654 5443
No 43
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-75 Score=697.13 Aligned_cols=462 Identities=22% Similarity=0.403 Sum_probs=356.1
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC--CCcEEEECCeeCCCCCHHH-Hhh
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP--TSGKILLDGHDLKSLQLKW-LRE 281 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~--~~G~i~~~g~~~~~~~~~~-~~~ 281 (1082)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+... +++
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 4899999999974 3499999999999999999999999999999999999996 8999999999997766543 467
Q ss_pred hceEEccCCCcChh-cHHHHHhcCCCC-----CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 001411 282 QMGLVSQEPALFAT-SIANNILLGKED-----ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 355 (1082)
Q Consensus 282 ~i~~v~Q~~~l~~~-ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lA 355 (1082)
.++||+|++.+++. |++||+.++... .+.++..+. +.+.++.+ |++........+||||||||++||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la 155 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLR-----AQKLLAQL--KLDINPATPVGNLGLGQQQLVEIA 155 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHH-----HHHHHHHc--CCCCCcccchhhCCHHHHHHHHHH
Confidence 79999999988875 999999886431 111221111 12233333 444444556678999999999999
Q ss_pred HhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhcCc
Q 001411 356 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGG 433 (1082)
Q Consensus 356 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 433 (1082)
|||+.+|++||||||||+||+.+...+.+.|.++. +++|+|+|||+++.+.. ||+|++|++|+++..|+.+++...
T Consensus 156 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-- 233 (506)
T PRK13549 156 KALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTED-- 233 (506)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHH--
Confidence 99999999999999999999999999999998874 47899999999998865 899999999999987754332100
Q ss_pred hhHHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCCCchhHHHHHHHhcchhHHHH
Q 001411 434 EYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAV 513 (1082)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (1082)
+..
T Consensus 234 ---~~~-------------------------------------------------------------------------- 236 (506)
T PRK13549 234 ---DII-------------------------------------------------------------------------- 236 (506)
T ss_pred ---HHH--------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 514 LGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMF 593 (1082)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 593 (1082)
..
T Consensus 237 ------------------------~~------------------------------------------------------ 238 (506)
T PRK13549 237 ------------------------TM------------------------------------------------------ 238 (506)
T ss_pred ------------------------HH------------------------------------------------------
Confidence 00
Q ss_pred HHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 594 SAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFV 673 (1082)
Q Consensus 594 ~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~ 673 (1082)
. +.. +.
T Consensus 239 --~-------~~~---~~-------------------------------------------------------------- 244 (506)
T PRK13549 239 --M-------VGR---EL-------------------------------------------------------------- 244 (506)
T ss_pred --h-------hCc---Cc--------------------------------------------------------------
Confidence 0 000 00
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 674 AEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSY 753 (1082)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1082)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccccc
Q 001411 754 ALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKG 833 (1082)
Q Consensus 754 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g 833 (1082)
.+ ..+..... +...
T Consensus 245 ----------------------------------------------------~~------~~~~~~~~--------~~~~ 258 (506)
T PRK13549 245 ----------------------------------------------------TA------LYPREPHT--------IGEV 258 (506)
T ss_pred ----------------------------------------------------cc------cccccccC--------CCCc
Confidence 00 00000000 0012
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-CCccEEEECCccCCCCCH-HHHhc
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-PISGTVLIDGYDIRTLNL-RSLRR 911 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-p~~G~I~idG~di~~i~~-~~lR~ 911 (1082)
.|+++||+++|+.+.+.++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++...+. +.+|+
T Consensus 259 ~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~ 338 (506)
T PRK13549 259 ILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIAQ 338 (506)
T ss_pred eEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHHHHHHC
Confidence 4899999999953223469999999999999999999999999999999999999 599999999999875543 45678
Q ss_pred ceEEEcccC---cccc-ccHHHHhccCCC-C------CCHHHHHHHHHHhcHHHHHhhCcccccc-cccCCCCCCChhHH
Q 001411 912 KIGLVQQEP---ALFS-TTIYENIKYGNE-D------ASEIELMKATKAANAHGFISRMPEGYQS-HVGDRGVQLSGGQK 979 (1082)
Q Consensus 912 ~i~~VpQdp---~Lf~-gTIreNl~~~~~-~------~~d~ei~~al~~a~l~~~i~~lp~gldt-~v~e~G~~LSgGQr 979 (1082)
+++||||+| .+|+ .|+.+|+.++.. . .+.++. ...+.+.++.+ |++. ........||||||
T Consensus 339 ~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~LSgG~k 411 (506)
T PRK13549 339 GIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAE-----LKTILESIQRL--KVKTASPELAIARLSGGNQ 411 (506)
T ss_pred CCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHH-----HHHHHHHHHhc--CccCCCcccccccCCHHHH
Confidence 899999997 3554 699999976421 0 011111 11233344443 3321 23344567999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQ 1057 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~e 1057 (1082)
||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||++++|++|+++..|++++
T Consensus 412 qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~~~~ 491 (506)
T PRK13549 412 QKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLKGDLINHN 491 (506)
T ss_pred HHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEecccc
Confidence 99999999999999999999999999999999999999864 48899999999999865 99999999999999999988
Q ss_pred Hh
Q 001411 1058 LL 1059 (1082)
Q Consensus 1058 Ll 1059 (1082)
+.
T Consensus 492 ~~ 493 (506)
T PRK13549 492 LT 493 (506)
T ss_pred CC
Confidence 64
No 44
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.1e-74 Score=696.36 Aligned_cols=465 Identities=27% Similarity=0.456 Sum_probs=354.5
Q ss_pred cEEEEEEEEECCCC--CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCCCCHH
Q 001411 205 QIEFSEVCFAYPSR--PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSLQLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~~~~ 277 (1082)
.++++|++++|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999632 23599999999999999999999999999999999999987 799999999998776543
Q ss_pred H---Hh-hhceEEccCCC--cCh-hcHHHHHhcCC---CCCC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCC
Q 001411 278 W---LR-EQMGLVSQEPA--LFA-TSIANNILLGK---EDAS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQ 343 (1082)
Q Consensus 278 ~---~~-~~i~~v~Q~~~--l~~-~ti~~ni~~g~---~~~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~ 343 (1082)
. +| +.+||++|++. +++ .|+++|+.++. ...+ .+++.++++..++.+. .........+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~--------~~~~~~~~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQA--------AKRLTDYPHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------HHHHhhCCcc
Confidence 2 33 57999999985 444 48999986421 0111 1233334443333210 0123445568
Q ss_pred CChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCcccccc-CCEEEEEeCCEEE
Q 001411 344 LSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVV 420 (1082)
Q Consensus 344 LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~ 420 (1082)
||||||||++|||||+.+|++||||||||+||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|+++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~ 236 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV 236 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999874 37899999999998864 8999999999999
Q ss_pred EecCchhhhhcCchhHHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCCCchhHHH
Q 001411 421 ESGTHVDLISKGGEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWE 500 (1082)
Q Consensus 421 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (1082)
+.|+++++..... ....
T Consensus 237 ~~g~~~~~~~~~~--------------------------------------------------------------~~~~- 253 (529)
T PRK15134 237 EQNRAATLFSAPT--------------------------------------------------------------HPYT- 253 (529)
T ss_pred EeCCHHHHhhCCC--------------------------------------------------------------CHHH-
Confidence 8887655431100 0000
Q ss_pred HHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 501 LLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLM 580 (1082)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 580 (1082)
..
T Consensus 254 ---------------------------------------------~~--------------------------------- 255 (529)
T PRK15134 254 ---------------------------------------------QK--------------------------------- 255 (529)
T ss_pred ---------------------------------------------HH---------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 581 GEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAV 660 (1082)
Q Consensus 581 ~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 660 (1082)
+...+ +
T Consensus 256 ---------------~~~~~---------~-------------------------------------------------- 261 (529)
T PRK15134 256 ---------------LLNSE---------P-------------------------------------------------- 261 (529)
T ss_pred ---------------HHHhC---------c--------------------------------------------------
Confidence 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 001411 661 VAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGF 740 (1082)
Q Consensus 661 ~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (1082)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCC
Q 001411 741 GYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQP 820 (1082)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~ 820 (1082)
+ ..+. .+
T Consensus 262 ------------------------------------------------------------------~------~~~~-~~ 268 (529)
T PRK15134 262 ------------------------------------------------------------------S------GDPV-PL 268 (529)
T ss_pred ------------------------------------------------------------------c------cccc-cc
Confidence 0 0000 00
Q ss_pred CCCCCcccccccccEEEEeEEEECCCC--------CCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCcc
Q 001411 821 DDPASKEVTEIKGNIELRNVSFKYPVR--------PDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISG 892 (1082)
Q Consensus 821 ~~~~~~~~~~~~g~I~~~~Vs~~Y~~~--------~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G 892 (1082)
. .. ....|+++||+++|+.. .+.++|+|+||+|++||++||+|+||||||||+++|.|++ |++|
T Consensus 269 ~-~~------~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~-~~~G 340 (529)
T PRK15134 269 P-EP------ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLI-NSQG 340 (529)
T ss_pred C-CC------CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcC-CCCc
Confidence 0 00 01148999999999521 1246999999999999999999999999999999999998 4899
Q ss_pred EEEECCccCCCCCHHH---HhcceEEEcccC--cccc-ccHHHHhccCCC----CCC----HHHHHHHHHHhcHHHHHhh
Q 001411 893 TVLIDGYDIRTLNLRS---LRRKIGLVQQEP--ALFS-TTIYENIKYGNE----DAS----EIELMKATKAANAHGFISR 958 (1082)
Q Consensus 893 ~I~idG~di~~i~~~~---lR~~i~~VpQdp--~Lf~-gTIreNl~~~~~----~~~----d~ei~~al~~a~l~~~i~~ 958 (1082)
+|.+||.++..++... +|++++||||+| .+|+ .|+++|+.++.. ..+ ++.+.++++..++.+
T Consensus 341 ~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~---- 416 (529)
T PRK15134 341 EIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLDP---- 416 (529)
T ss_pred EEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCCH----
Confidence 9999999998776543 578899999998 3665 599999976421 011 123334444444421
Q ss_pred CcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh
Q 001411 959 MPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR 1036 (1082)
Q Consensus 959 lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~ 1036 (1082)
........+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.
T Consensus 417 ------~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~ 490 (529)
T PRK15134 417 ------ETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVR 490 (529)
T ss_pred ------HHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHH
Confidence 112334467999999999999999999999999999999999999999999998752 789999999999987
Q ss_pred c-cCEEEEEeCCEEEEecChHHHhhhcc
Q 001411 1037 N-ADKIAVLQQGKVAEIGSHEQLLRKEN 1063 (1082)
Q Consensus 1037 ~-~DrI~Vl~~G~ive~G~~~eLl~~~~ 1063 (1082)
. ||+|++|++|+|++.|+++++++.+.
T Consensus 491 ~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 518 (529)
T PRK15134 491 ALCHQVIVLRQGEVVEQGDCERVFAAPQ 518 (529)
T ss_pred HhcCeEEEEECCEEEEEcCHHHHhcCCC
Confidence 5 99999999999999999999986443
No 45
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=5.7e-73 Score=690.80 Aligned_cols=430 Identities=39% Similarity=0.636 Sum_probs=395.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHH
Q 001411 9 YLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIE 88 (1082)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~ 88 (1082)
.+..+++.+++++..+|.+++++++..|++.+...++.++.++..++.++..++..+.+.|.++|++++|+|+.++...+
T Consensus 136 ~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~ 215 (567)
T COG1132 136 SILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELK 215 (567)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHH
Confidence 56778888899999999999999999999998888888777888888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 89 SYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAI 168 (1082)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~ 168 (1082)
++.+..++..+...+.....+...++...+..+..++++++|++++..+.+++|.+.+++.+......|+..+...+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 295 (567)
T COG1132 216 RFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLL 295 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888887777777777778888888888899999999999999999998888777777778899999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHH
Q 001411 169 AKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKST 248 (1082)
Q Consensus 169 ~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKST 248 (1082)
..+..+++|++++++.+++..+.... .....+.|+++||+|+|++ ++++|+|+||+++|||++||||||||||||
T Consensus 296 ~~~~~a~~ri~~~l~~~~~~~~~~~~----~~~~~~~I~f~~vsf~y~~-~~~vl~~is~~i~~Ge~vaiVG~sGsGKST 370 (567)
T COG1132 296 QRASAAAERLFELLDEEPEVEDPPDP----LKDTIGSIEFENVSFSYPG-KKPVLKDISFSIEPGEKVAIVGPSGSGKST 370 (567)
T ss_pred HHHHHHHHHHHHHHcCCccccCCCCC----CCCCCCeEEEEEEEEEcCC-CCccccCceEEEcCCCEEEEECCCCCCHHH
Confidence 99999999999999875543211111 1223467999999999985 245999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhc
Q 001411 249 IISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEG 328 (1082)
Q Consensus 249 ll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~ 328 (1082)
|+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||+|+||++||+|||.+|+|+++++++++||+.+++++++.+
T Consensus 371 l~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~ 450 (567)
T COG1132 371 LIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIAN 450 (567)
T ss_pred HHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccC
Q 001411 329 LPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDV 408 (1082)
Q Consensus 329 lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~ 408 (1082)
+|+||||.+||+|.+||||||||++||||+++||+|||||||||+||+++|+.+++.+.++.++||+|+|+||+++++.|
T Consensus 451 lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~a 530 (567)
T COG1132 451 LPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNA 530 (567)
T ss_pred CcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999888889999999999999999
Q ss_pred CEEEEEeCCEEEEecCchhhhhcCchhHHHHHhhh
Q 001411 409 DTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQS 443 (1082)
Q Consensus 409 d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 443 (1082)
|+|+||++|+|++.|+|+||++++|.|++++..+.
T Consensus 531 D~IiVl~~G~i~e~G~h~eLl~~~g~y~~l~~~~~ 565 (567)
T COG1132 531 DRIIVLDNGRIVERGTHEELLAKGGLYARLYQAQG 565 (567)
T ss_pred CEEEEEECCEEEEecCHHHHHHcCCHHHHHHHHhh
Confidence 99999999999999999999999999999998654
No 46
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=9.8e-73 Score=703.16 Aligned_cols=428 Identities=29% Similarity=0.396 Sum_probs=389.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHH
Q 001411 7 LRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKA 86 (1082)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~ 86 (1082)
+..+..+++.++++++++|.+++++++++|+++++..++.+..++..++.++..++..+.+.|.++|+++||++|.|+.+
T Consensus 257 ~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~ 336 (686)
T TIGR03797 257 LLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRA 336 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHH
Confidence 33444455667778899999999999999998888888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 87 IESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLA 166 (1082)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~ 166 (1082)
.++|.+...+..+...+......+...+..++..+..++++++|++++.+|.+|+|.++++.........|+..+...+.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~ 416 (686)
T TIGR03797 337 FARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLI 416 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888877777777778888889999999999999999988887766777788999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcH
Q 001411 167 AIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGK 246 (1082)
Q Consensus 167 ~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGK 246 (1082)
.+++++.+.+|+.++++.+++.+ . .. .......+.|+++||+|+|++.++++|+|+||+|+|||++||+|+|||||
T Consensus 417 ~~~~~~~~~~ri~~~l~~~~e~~-~--~~-~~~~~~~~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGK 492 (686)
T TIGR03797 417 SILAVIPLWERAKPILEALPEVD-E--AK-TDPGKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGK 492 (686)
T ss_pred HHHHHHHHHHHHHHHhcCCcccc-c--Cc-CCCCCCCceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCH
Confidence 99999999999999997654422 1 11 11122346799999999997555569999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHH
Q 001411 247 STIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFV 326 (1082)
Q Consensus 247 STll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i 326 (1082)
|||+|+|+|+|+|++|+|.+||+|+++++++++|++||||||+|++|++||+|||.+++| .++++++++|+.+++++++
T Consensus 493 STLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i 571 (686)
T TIGR03797 493 STLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDI 571 (686)
T ss_pred HHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHH
Confidence 999999999999999999999999999999999999999999999999999999999988 8899999999999999999
Q ss_pred hcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc
Q 001411 327 EGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR 406 (1082)
Q Consensus 327 ~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~ 406 (1082)
+++|+|+||.+||+|.+|||||||||+|||||+++|+|||||||||+||+++|+.+.+.|+++ ++|+|+||||++.++
T Consensus 572 ~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~ 649 (686)
T TIGR03797 572 RAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIR 649 (686)
T ss_pred HhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999886 589999999999999
Q ss_pred cCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHh
Q 001411 407 DVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNL 441 (1082)
Q Consensus 407 ~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 441 (1082)
.||+|++|++|++++.|+|+|++++++.|++++..
T Consensus 650 ~~D~Iivl~~G~iv~~G~~~~Ll~~~~~y~~l~~~ 684 (686)
T TIGR03797 650 NADRIYVLDAGRVVQQGTYDELMAREGLFAQLARR 684 (686)
T ss_pred cCCEEEEEECCEEEEECCHHHHHhCCcHHHHHHHh
Confidence 99999999999999999999999999999998864
No 47
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-73 Score=687.02 Aligned_cols=459 Identities=21% Similarity=0.385 Sum_probs=350.5
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHH-Hhhhc
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW-LREQM 283 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~i 283 (1082)
.++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... .++.+
T Consensus 5 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 4899999999974 34999999999999999999999999999999999999999999999999998776554 34579
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCCC---------CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 001411 284 GLVSQEPALFAT-SIANNILLGKEDA---------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~~---------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~ 353 (1082)
+||+|++.+++. |++||+.++.... +.++..+ .+.+.++.+ |+.........+||||||||++
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv~ 155 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRV-----RAAMMLLRV--GLKVDLDEKVANLSISHKQMLE 155 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHH-----HHHHHHHHc--CCCCCcccchhhCCHHHHHHHH
Confidence 999999988876 9999998764210 1111111 112223333 4433445556789999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhc
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 156 ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 235 (510)
T PRK09700 156 IAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSND 235 (510)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCHH
Confidence 9999999999999999999999999999999999875 47899999999999864 899999999999887765443210
Q ss_pred CchhHHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCCCchhHHHHHHHhcchhHH
Q 001411 432 GGEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPY 511 (1082)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (1082)
+...
T Consensus 236 -----~~~~----------------------------------------------------------------------- 239 (510)
T PRK09700 236 -----DIVR----------------------------------------------------------------------- 239 (510)
T ss_pred -----HHHH-----------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 512 AVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLS 591 (1082)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 591 (1082)
.
T Consensus 240 ---------------------------~---------------------------------------------------- 240 (510)
T PRK09700 240 ---------------------------L---------------------------------------------------- 240 (510)
T ss_pred ---------------------------H----------------------------------------------------
Confidence 0
Q ss_pred HHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 592 MFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGA 671 (1082)
Q Consensus 592 l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~ 671 (1082)
+ +.... .
T Consensus 241 ----~-------~~~~~--~------------------------------------------------------------ 247 (510)
T PRK09700 241 ----M-------VGREL--Q------------------------------------------------------------ 247 (510)
T ss_pred ----h-------cCCCc--c------------------------------------------------------------
Confidence 0 00000 0
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 672 FVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLC 751 (1082)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1082)
.
T Consensus 248 ---------------------------------------------------------~---------------------- 248 (510)
T PRK09700 248 ---------------------------------------------------------N---------------------- 248 (510)
T ss_pred ---------------------------------------------------------c----------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccc
Q 001411 752 SYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEI 831 (1082)
Q Consensus 752 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~ 831 (1082)
+ .....+. +..+. .
T Consensus 249 -------------------------------------------------------~---~~~~~~~--~~~~~------~ 262 (510)
T PRK09700 249 -------------------------------------------------------R---FNAMKEN--VSNLA------H 262 (510)
T ss_pred -------------------------------------------------------c---ccccccc--cccCC------C
Confidence 0 0000000 00000 0
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCH-HHHh
Q 001411 832 KGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL-RSLR 910 (1082)
Q Consensus 832 ~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~-~~lR 910 (1082)
...|+++|++++|. .+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+. +.+|
T Consensus 263 ~~~l~~~~l~~~~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~ 337 (510)
T PRK09700 263 ETVFEVRNVTSRDR-----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVK 337 (510)
T ss_pred CcEEEEeCccccCC-----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHHHHHH
Confidence 11499999998763 38999999999999999999999999999999999999999999999999876544 4578
Q ss_pred cceEEEcccC---cccc-ccHHHHhccCCCC-----------CCHHHHHHHHHHhcHHHHHhhCccccc-ccccCCCCCC
Q 001411 911 RKIGLVQQEP---ALFS-TTIYENIKYGNED-----------ASEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQL 974 (1082)
Q Consensus 911 ~~i~~VpQdp---~Lf~-gTIreNl~~~~~~-----------~~d~ei~~al~~a~l~~~i~~lp~gld-t~v~e~G~~L 974 (1082)
++++||||++ .+|+ -|+++|+.++... ....+. ...+.+.++.+ |+. .........|
T Consensus 338 ~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~L 410 (510)
T PRK09700 338 KGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDE-----QRTAENQRELL--ALKCHSVNQNITEL 410 (510)
T ss_pred CCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHH-----HHHHHHHHHhc--CCCCCCccCccccC
Confidence 8999999984 5775 4999999864210 011110 11122333333 232 1233344569
Q ss_pred ChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEe
Q 001411 975 SGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEI 1052 (1082)
Q Consensus 975 SgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~ 1052 (1082)
|||||||++|||||+++|+|||||||||+||+.+.+.+.+.|++.. ++.|||+|||+++.+.. ||+|++|++|++++.
T Consensus 411 SgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~ 490 (510)
T PRK09700 411 SGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQI 490 (510)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999999864 47899999999998865 999999999999998
Q ss_pred cChHH
Q 001411 1053 GSHEQ 1057 (1082)
Q Consensus 1053 G~~~e 1057 (1082)
+++.+
T Consensus 491 ~~~~~ 495 (510)
T PRK09700 491 LTNRD 495 (510)
T ss_pred ecCcc
Confidence 87633
No 48
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.7e-72 Score=702.51 Aligned_cols=434 Identities=29% Similarity=0.388 Sum_probs=392.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcch
Q 001411 4 GHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGE 83 (1082)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e 83 (1082)
...+..+..+++.++++++++|.++++.++++|+++++..++.+..++..++.++..++..+.+.|.++|+++||++|+|
T Consensus 272 ~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e 351 (710)
T TIGR03796 272 ATTALDAVMLVFYALLMLLYDPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLE 351 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCC
Confidence 34556667777778888999999999999999999988899999999988899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 001411 84 AKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAP 163 (1082)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~ 163 (1082)
+.+.++|.+...+..+...+..........+..++..+..++++++|++++.+|.+|+|.++++.........|+..+..
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~ 431 (710)
T TIGR03796 352 SDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVG 431 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888887777777777778888899999999999999999988877777777788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCC---CCCCCC-CCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEE
Q 001411 164 NLAAIAKGKAAAANIISIIKENSHSSERPG---DDGITL-PKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFV 239 (1082)
Q Consensus 164 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~---~~~~~~-~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~iv 239 (1082)
.+..++++..+++|+.++++.+++.+.... ...... +...+.|+++||+|+|++.++++|+|+||+|+|||+++||
T Consensus 432 ~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIv 511 (710)
T TIGR03796 432 FGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALV 511 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEE
Confidence 999999999999999999976554321110 000111 2234679999999999865556999999999999999999
Q ss_pred cCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHH
Q 001411 240 GPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKA 319 (1082)
Q Consensus 240 G~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~ 319 (1082)
||||||||||+++|+|+|+|++|+|.+||.|+++++.+++|++|+||||+|++|++||+|||.++.|+.++++++++|+.
T Consensus 512 G~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~ 591 (710)
T TIGR03796 512 GGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKD 591 (710)
T ss_pred CCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred hchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEc
Q 001411 320 ANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVA 399 (1082)
Q Consensus 320 ~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vt 399 (1082)
+++++++.++|+|++|.+||+|.+|||||||||+||||++++|+|+|||||||+||+++|+.+.+.|++ .++|+|+||
T Consensus 592 ~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~Iiit 669 (710)
T TIGR03796 592 AAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVA 669 (710)
T ss_pred hCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999999986 489999999
Q ss_pred cCccccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHH
Q 001411 400 HRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALV 439 (1082)
Q Consensus 400 H~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 439 (1082)
||++.++.||+|++|++|++++.|+|+|++++++.|++++
T Consensus 670 Hrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll~~~~~y~~l~ 709 (710)
T TIGR03796 670 HRLSTIRDCDEIIVLERGKVVQRGTHEELWAVGGAYARLI 709 (710)
T ss_pred cCHHHHHhCCEEEEEeCCEEEEecCHHHHHHcCCcHHHHh
Confidence 9999999999999999999999999999999999998876
No 49
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=3.7e-72 Score=696.77 Aligned_cols=430 Identities=39% Similarity=0.580 Sum_probs=386.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcch
Q 001411 4 GHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGE 83 (1082)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e 83 (1082)
..++..+..+++.++++++++|.++++.++.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||.|++|
T Consensus 280 ~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e 359 (711)
T TIGR00958 280 NVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAE 359 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhccc
Confidence 34566677777788889999999999999999999888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 001411 84 AKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAP 163 (1082)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~ 163 (1082)
+.+.++|.+..++..+...+.....+....+..++..+..++++++|++++.+|.+|+|.+++++.+......|+..+..
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~ 439 (711)
T TIGR00958 360 EGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSY 439 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888887777766666655555666666777788999999999999999998888777777889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCC-CccccceeEEEeCCCEEEEEcCC
Q 001411 164 NLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGPS 242 (1082)
Q Consensus 164 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~-~~~l~~i~l~i~~g~~~~ivG~s 242 (1082)
.+..+.++..+.+|+.++++.+++.++. ....+.+..+.|+++||+|+||+++ +++|+|+||+|+|||+++|||||
T Consensus 440 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~---~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~S 516 (711)
T TIGR00958 440 VYSGMMQAVGASEKVFEYLDRKPNIPLT---GTLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPS 516 (711)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCC---CCCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCC
Confidence 9999999999999999999765443211 1111122346799999999998643 46999999999999999999999
Q ss_pred CCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhch
Q 001411 243 GSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANA 322 (1082)
Q Consensus 243 GsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~ 322 (1082)
|||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||+|+|++|++||+|||.+|.++.+++++.++++.+++
T Consensus 517 GsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l 596 (711)
T TIGR00958 517 GSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANA 596 (711)
T ss_pred CCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred HHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCc
Q 001411 323 HSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRL 402 (1082)
Q Consensus 323 ~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~ 402 (1082)
+++++++|+|+||.+||+|.+||||||||++||||++++|+|+|||||||+||+++++.+.+ . ...+++|+|+||||+
T Consensus 597 ~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~-~~~~~~TvIiItHrl 674 (711)
T TIGR00958 597 HDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-S-RSRASRTVLLIAHRL 674 (711)
T ss_pred HHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-h-hccCCCeEEEEeccH
Confidence 99999999999999999999999999999999999999999999999999999999999998 3 334689999999999
Q ss_pred cccccCCEEEEEeCCEEEEecCchhhhhcCchhHHH
Q 001411 403 STVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAAL 438 (1082)
Q Consensus 403 ~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 438 (1082)
++++.||+|++|++|+|+++|+|+||+++++.|+++
T Consensus 675 ~~i~~aD~IivL~~G~ive~Gt~~eL~~~~~~y~~l 710 (711)
T TIGR00958 675 STVERADQILVLKKGSVVEMGTHKQLMEDQGCYKHL 710 (711)
T ss_pred HHHHhCCEEEEEECCEEEEeeCHHHHHhCCCchHhc
Confidence 999999999999999999999999999998888775
No 50
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=8.2e-71 Score=667.50 Aligned_cols=533 Identities=19% Similarity=0.189 Sum_probs=427.1
Q ss_pred HHHHHHHhc-chhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 498 IWELLKLNA-AEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYF 576 (1082)
Q Consensus 498 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 576 (1082)
+++++.+.+ ++++.+.++.+.+++.++.....++.+..++..... . .. .....++++.++..++.++..++
T Consensus 5 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~---~--~~---~~~~~~~~~~~~~~~~~~~~~~~ 76 (555)
T TIGR01194 5 IGEILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENF---L--GQ---GSLFSFGGLCLLALLFRIGADIF 76 (555)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---c--cc---hHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555556 667766666666655555444444444433321100 0 00 01122444555666778888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 577 YTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWR 656 (1082)
Q Consensus 577 ~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 656 (1082)
....+.+...++|.++++++++.|+.||+. +++|++++|+++|++.++..+.. +..++..++.+++.++++++++|.
T Consensus 77 ~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 153 (555)
T TIGR01194 77 PAYAGMHIIANLRIALCEKILGAPIEEIDR--RGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVP 153 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHh--cCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999985 79999999999999999998864 777788888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHH--HHHHHHHHHHhhHHHHHHHH
Q 001411 657 LAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEK--RISIQFASELSQPNKQALLR 734 (1082)
Q Consensus 657 l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~--~~~~~~~~~~~~~~~~~~~~ 734 (1082)
+++++++.+|+.++...+..+..++...+.++...+..+.+.|.+.|++++|+|+.++ ...+++.+..++..+...+.
T Consensus 154 L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (555)
T TIGR01194 154 MFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIE 233 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999988888877776666666666666777778888999999999999999999953 55677777777777766655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 001411 735 GHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYR 814 (1082)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~ 814 (1082)
.........+...+..+...+.+|++... +.++.|.++++..+......++..+...+..+..+..+.+|+.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~ 310 (555)
T TIGR01194 234 ILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGER 310 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 54444444444444444444444554432 688999999888888888999999999999999999999999999753
Q ss_pred cccCCC--CCCC-Cc----ccccccccEEEEeEEEECCCCC--CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhc
Q 001411 815 KTAIQP--DDPA-SK----EVTEIKGNIELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMR 885 (1082)
Q Consensus 815 ~~~~~~--~~~~-~~----~~~~~~g~I~~~~Vs~~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~r 885 (1082)
..+.++ +.+. .. ++....+.|+|+||+|+|++.+ ..++|+|+||+|++||++|||||||||||||+++|.|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g 390 (555)
T TIGR01194 311 FNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCG 390 (555)
T ss_pred hccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhC
Confidence 211111 0010 00 1112346799999999997432 2369999999999999999999999999999999999
Q ss_pred cccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccc
Q 001411 886 FYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQS 965 (1082)
Q Consensus 886 l~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt 965 (1082)
+|+|++|+|.+||+|+++++.+++|+++++|+|||++|++|+++|+ .+++++++++++++.++++++++++|+||||
T Consensus 391 ~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t 467 (555)
T TIGR01194 391 LYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGGFST 467 (555)
T ss_pred CCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccccCC
Confidence 9999999999999999999999999999999999999999999996 3567899999999999999999999999999
Q ss_pred cccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHH-h-cCCceEEEEecCchhhhccCEEEE
Q 001411 966 HVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDK-L-MEGRTTIMVAHRLSTIRNADKIAV 1043 (1082)
Q Consensus 966 ~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~-~-~~~~TvI~IaHrl~ti~~~DrI~V 1043 (1082)
. .+|||||||||+||||++++|+|||||||||+||++|++.+++.+.+ . .+++|+|+||||++++..||+|+|
T Consensus 468 ~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~ 542 (555)
T TIGR01194 468 T-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIK 542 (555)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEE
Confidence 5 68999999999999999999999999999999999999999987753 3 368999999999999999999999
Q ss_pred EeCCEEEEe
Q 001411 1044 LQQGKVAEI 1052 (1082)
Q Consensus 1044 l~~G~ive~ 1052 (1082)
|++|+++|.
T Consensus 543 l~~G~i~~~ 551 (555)
T TIGR01194 543 LAAGCIVKD 551 (555)
T ss_pred EECCEEEEe
Confidence 999999974
No 51
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.8e-73 Score=687.41 Aligned_cols=453 Identities=26% Similarity=0.475 Sum_probs=344.4
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCC--CCCCcEEEEC----------------
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLY--EPTSGKILLD---------------- 267 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~--~~~~G~i~~~---------------- 267 (1082)
|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~ 78 (520)
T TIGR03269 1 IEVKNLTKKFDG--KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKV 78 (520)
T ss_pred CEEEEEEEEECC--eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccc
Confidence 478999999964 34999999999999999999999999999999999996 7999999997
Q ss_pred -------CeeCC-------CCC---HHHHhhhceEEccC-CCcChh-cHHHHHhcCCCC--CCH----HHHHHHHHHhch
Q 001411 268 -------GHDLK-------SLQ---LKWLREQMGLVSQE-PALFAT-SIANNILLGKED--ASM----DRVIEAAKAANA 322 (1082)
Q Consensus 268 -------g~~~~-------~~~---~~~~~~~i~~v~Q~-~~l~~~-ti~~ni~~g~~~--~~~----~~~~~~~~~~~~ 322 (1082)
|.++. ..+ ...+|+.++|++|+ +.+|+. |++||+.++... ... +++.++++..
T Consensus 79 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-- 156 (520)
T TIGR03269 79 GEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMV-- 156 (520)
T ss_pred ccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--
Confidence 32221 111 12456789999998 567764 999999875321 111 2233333333
Q ss_pred HHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEcc
Q 001411 323 HSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAH 400 (1082)
Q Consensus 323 ~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH 400 (1082)
|++........+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|||+|||
T Consensus 157 ---------gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtH 227 (520)
T TIGR03269 157 ---------QLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSH 227 (520)
T ss_pred ---------CChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeC
Confidence 33333444557899999999999999999999999999999999999999999999874 3789999999
Q ss_pred Cccccc-cCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhh
Q 001411 401 RLSTVR-DVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFES 479 (1082)
Q Consensus 401 ~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1082)
+++.+. .||+|++|++|+++..|+++++... +
T Consensus 228 d~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~---~-------------------------------------------- 260 (520)
T TIGR03269 228 WPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV---F-------------------------------------------- 260 (520)
T ss_pred CHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH---H--------------------------------------------
Confidence 999986 4899999999999876643222100 0
Q ss_pred hhhhhhccCCCCCCCchhHHHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHH
Q 001411 480 SKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIF 559 (1082)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (1082)
T Consensus 261 -------------------------------------------------------------------------------- 260 (520)
T TIGR03269 261 -------------------------------------------------------------------------------- 260 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 001411 560 VGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQN 639 (1082)
Q Consensus 560 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~ 639 (1082)
...
T Consensus 261 --------------------------------------------~~~--------------------------------- 263 (520)
T TIGR03269 261 --------------------------------------------MEG--------------------------------- 263 (520)
T ss_pred --------------------------------------------Hhh---------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHH
Q 001411 640 VALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQ 719 (1082)
Q Consensus 640 ~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~ 719 (1082)
+ .
T Consensus 264 ---------------~------------------------~--------------------------------------- 265 (520)
T TIGR03269 264 ---------------V------------------------S--------------------------------------- 265 (520)
T ss_pred ---------------c------------------------h---------------------------------------
Confidence 0 0
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 720 FASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIV 799 (1082)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1082)
T Consensus 266 -------------------------------------------------------------------------------- 265 (520)
T TIGR03269 266 -------------------------------------------------------------------------------- 265 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhhcccccCCCCCCCCcccccccccEEEEeEEEECCC--CCCcccccceeEEeeCCcEEEEEcCCCCCHH
Q 001411 800 KGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPV--RPDITIFENLNLKVSAGRSLAVVGQSGSGKS 877 (1082)
Q Consensus 800 ~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~--~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKS 877 (1082)
+. .. +. +. +. ....|+++||+++|+. +...++|+|+||+|++||++||+|+||||||
T Consensus 266 -------~~----~~-~~--~~-~~------~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKS 324 (520)
T TIGR03269 266 -------EV----EK-EC--EV-EV------GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKT 324 (520)
T ss_pred -------hh----cc-cc--cc-CC------CCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHH
Confidence 00 00 00 00 00 0124999999999952 1124699999999999999999999999999
Q ss_pred HHHHHHhccccCCccEEEEC-Cc---cCCCCC---HHHHhcceEEEcccCcccc-ccHHHHhccCCC-CCC----HHHHH
Q 001411 878 TVISLVMRFYDPISGTVLID-GY---DIRTLN---LRSLRRKIGLVQQEPALFS-TTIYENIKYGNE-DAS----EIELM 944 (1082)
Q Consensus 878 TL~~lL~rl~~p~~G~I~id-G~---di~~i~---~~~lR~~i~~VpQdp~Lf~-gTIreNl~~~~~-~~~----d~ei~ 944 (1082)
||+++|.|+++|++|+|.++ |. ++...+ ...+|++++||||++.+|+ .|+++|+.++.. ... ++++.
T Consensus 325 TLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 404 (520)
T TIGR03269 325 TLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARMKAV 404 (520)
T ss_pred HHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99999999999999999996 64 344333 2356788999999998887 499999975311 111 12233
Q ss_pred HHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-C-C
Q 001411 945 KATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-E-G 1022 (1082)
Q Consensus 945 ~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~-~ 1022 (1082)
++++..++.+. ..+.........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. + +
T Consensus 405 ~~l~~~~l~~~------~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g 478 (520)
T TIGR03269 405 ITLKMVGFDEE------KAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEME 478 (520)
T ss_pred HHHHhCCCCCc------cchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcC
Confidence 44444443210 00001233446799999999999999999999999999999999999999999999874 2 7
Q ss_pred ceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 1023 RTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 1023 ~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
.|||+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 479 ~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 479 QTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred cEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 899999999999975 99999999999999999998865
No 52
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=5.4e-73 Score=679.51 Aligned_cols=454 Identities=23% Similarity=0.391 Sum_probs=350.2
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHH-Hhhhc
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW-LREQM 283 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~i 283 (1082)
-|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999974 34999999999999999999999999999999999999999999999999987655443 35679
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCC------CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 284 GLVSQEPALFAT-SIANNILLGKED------ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
+|++|++.+++. |++||+.++... .+.++..+. +.+.++.+ |+.........+||||||||++|||
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 154 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAE-----ADKLLARL--NLRFSSDKLVGELSIGEQQMVEIAK 154 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHH-----HHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHH
Confidence 999999988865 999999986431 111111111 12233333 4433444556789999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhcCch
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGGE 434 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 434 (1082)
||+.+|++|||||||++||+.+.+.+.+.|.++. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~--- 231 (501)
T PRK10762 155 VLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTED--- 231 (501)
T ss_pred HHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHH---
Confidence 9999999999999999999999999999998874 46899999999998864 899999999999887654332100
Q ss_pred hHHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCCCchhHHHHHHHhcchhHHHHH
Q 001411 435 YAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVL 514 (1082)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (1082)
.+.
T Consensus 232 --~~~--------------------------------------------------------------------------- 234 (501)
T PRK10762 232 --SLI--------------------------------------------------------------------------- 234 (501)
T ss_pred --HHH---------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 515 GSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFS 594 (1082)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 594 (1082)
...
T Consensus 235 -----------------------~~~------------------------------------------------------ 237 (501)
T PRK10762 235 -----------------------EMM------------------------------------------------------ 237 (501)
T ss_pred -----------------------HHh------------------------------------------------------
Confidence 000
Q ss_pred HHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 595 AILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVA 674 (1082)
Q Consensus 595 ~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~ 674 (1082)
+...
T Consensus 238 ---------~~~~------------------------------------------------------------------- 241 (501)
T PRK10762 238 ---------VGRK------------------------------------------------------------------- 241 (501)
T ss_pred ---------cCCC-------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 675 EQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYA 754 (1082)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (1082)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCccccccccc
Q 001411 755 LGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGN 834 (1082)
Q Consensus 755 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~ 834 (1082)
. ....+.. +. ++....
T Consensus 242 -----------------------------------------------------~---~~~~~~~-~~-------~~~~~~ 257 (501)
T PRK10762 242 -----------------------------------------------------L---EDQYPRL-DK-------APGEVR 257 (501)
T ss_pred -----------------------------------------------------c---ccccccc-cc-------CCCCcE
Confidence 0 0000000 00 000114
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCH-HHHhcce
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL-RSLRRKI 913 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~-~~lR~~i 913 (1082)
|+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+|+++
T Consensus 258 l~~~~l~~--------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~~~i 329 (501)
T PRK10762 258 LKVDNLSG--------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGI 329 (501)
T ss_pred EEEeCccc--------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHHCCC
Confidence 88999983 36999999999999999999999999999999999999999999999999987665 3567889
Q ss_pred EEEcccC---ccc-cccHHHHhccCCCC--------CCHHHHHHHHHHhcHHHHHhhCccccc-ccccCCCCCCChhHHH
Q 001411 914 GLVQQEP---ALF-STTIYENIKYGNED--------ASEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 914 ~~VpQdp---~Lf-~gTIreNl~~~~~~--------~~d~ei~~al~~a~l~~~i~~lp~gld-t~v~e~G~~LSgGQrQ 980 (1082)
+||||+| .+| ..|+++|+.++... .+..+. ...+.++++.+ |++ .........|||||||
T Consensus 330 ~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~LSgGekq 402 (501)
T PRK10762 330 VYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADE-----QQAVSDFIRLF--NIKTPSMEQAIGLLSGGNQQ 402 (501)
T ss_pred EEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHH-----HHHHHHHHHhc--CCCCCCccCchhhCCHHHHH
Confidence 9999997 355 46999999863210 111111 11223334433 332 2234455679999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
|++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 403 rv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 482 (501)
T PRK10762 403 KVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGEFTREQA 482 (501)
T ss_pred HHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEeccccC
Confidence 9999999999999999999999999999999999999875 47899999999999865 999999999999999998876
Q ss_pred h
Q 001411 1059 L 1059 (1082)
Q Consensus 1059 l 1059 (1082)
.
T Consensus 483 ~ 483 (501)
T PRK10762 483 T 483 (501)
T ss_pred C
Confidence 4
No 53
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2e-71 Score=680.97 Aligned_cols=434 Identities=36% Similarity=0.549 Sum_probs=392.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 001411 5 HALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEA 84 (1082)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 84 (1082)
.++..+..+++.++++++++|.+++++++++|+.+++..++.+++++..++.++..++..+.+.|.++|+++||++|.|+
T Consensus 145 ~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~ 224 (582)
T PRK11176 145 TVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQE 224 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCH
Confidence 45666777777888889999999999999889888888888889888888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 85 KAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPN 164 (1082)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~ 164 (1082)
.+.++|++..++..+...+..+.......+..++..+..++++++|++++.+|.+|+|.+.+++.+......|+..+...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~ 304 (582)
T PRK11176 225 VETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNV 304 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888888777777777777777778889999999999999999877766666667889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCC
Q 001411 165 LAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGS 244 (1082)
Q Consensus 165 ~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGs 244 (1082)
+..+..++.+.+|+.++++.+++.+ . .. ...++..+.|+++||+|+|+++..++|+|+||+|++||+++|+|+|||
T Consensus 305 ~~~~~~~~~~~~ri~~~~~~~~~~~-~-~~--~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGs 380 (582)
T PRK11176 305 NAQFQRGMAACQTLFAILDLEQEKD-E-GK--RVIERAKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGS 380 (582)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcCC-C-CC--cCCCCCCCeEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCC
Confidence 9999999999999999997543321 1 11 111223357999999999986555699999999999999999999999
Q ss_pred cHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCC-CCHHHHHHHHHHhchH
Q 001411 245 GKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKED-ASMDRVIEAAKAANAH 323 (1082)
Q Consensus 245 GKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~-~~~~~~~~~~~~~~~~ 323 (1082)
|||||+++|+|+++|++|+|.+||+|+++++.+++|++|+||||+|++|++||+|||.+|.++ .++++++++|+.++++
T Consensus 381 GKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~ 460 (582)
T PRK11176 381 GKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAM 460 (582)
T ss_pred CHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcH
Confidence 999999999999999999999999999999999999999999999999999999999999765 5899999999999999
Q ss_pred HHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcc
Q 001411 324 SFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLS 403 (1082)
Q Consensus 324 ~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~ 403 (1082)
++++++|+|+||.+|++|.+||||||||++|||||+++|+|+|||||||+||+++++.+.+.|.++.+++|+|+||||++
T Consensus 461 ~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~ 540 (582)
T PRK11176 461 DFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS 540 (582)
T ss_pred HHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999878899999999999
Q ss_pred ccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHhh
Q 001411 404 TVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQ 442 (1082)
Q Consensus 404 ~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 442 (1082)
.++.||+|++|++|++++.|+|++++++++.|++++..+
T Consensus 541 ~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~~~y~~l~~~~ 579 (582)
T PRK11176 541 TIEKADEILVVEDGEIVERGTHAELLAQNGVYAQLHKMQ 579 (582)
T ss_pred HHHhCCEEEEEECCEEEEeCCHHHHHhCCChHHHHHHHH
Confidence 999999999999999999999999999999999998754
No 54
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-73 Score=680.65 Aligned_cols=457 Identities=25% Similarity=0.412 Sum_probs=347.6
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCH-HHHhhhc
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL-KWLREQM 283 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~~~~i 283 (1082)
.++++|++++|++. ++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+.|
T Consensus 4 ~l~~~~l~~~~~~~--~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPGV--KALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECCE--EEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 48999999999743 49999999999999999999999999999999999999999999999999875543 4567789
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCC-----CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHh
Q 001411 284 GLVSQEPALFAT-SIANNILLGKED-----ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 357 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARa 357 (1082)
+|++|++.+++. |++||+.++... .+..+..+ .+.+.++.+ |++........+||||||||++||||
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lara 154 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNY-----EAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAKA 154 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHH-----HHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHHH
Confidence 999999988876 999999986421 11111111 112233333 33333445567899999999999999
Q ss_pred cccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhcCchh
Q 001411 358 VLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGGEY 435 (1082)
Q Consensus 358 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 435 (1082)
|+.+|+++||||||++||+.+.+.+.+.|.++. +++|+|+|||+++.+.. ||+|++|++|+++..++..+...
T Consensus 155 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~----- 229 (501)
T PRK11288 155 LARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVD----- 229 (501)
T ss_pred HHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCC-----
Confidence 999999999999999999999999999998874 47899999999998865 89999999999975432100000
Q ss_pred HHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCCCchhHHHHHHHhcchhHHHHHH
Q 001411 436 AALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLG 515 (1082)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (1082)
. + .. .
T Consensus 230 -----------------------------------------------~--~----------~~---~------------- 234 (501)
T PRK11288 230 -----------------------------------------------R--D----------QL---V------------- 234 (501)
T ss_pred -----------------------------------------------H--H----------HH---H-------------
Confidence 0 0 00 0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 516 SVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSA 595 (1082)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 595 (1082)
. .
T Consensus 235 ----------------------~--------------------------------------------------------~ 236 (501)
T PRK11288 235 ----------------------Q--------------------------------------------------------A 236 (501)
T ss_pred ----------------------H--------------------------------------------------------H
Confidence 0 0
Q ss_pred HHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 596 ILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAE 675 (1082)
Q Consensus 596 ~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~ 675 (1082)
. .... .
T Consensus 237 ~-------~~~~---~---------------------------------------------------------------- 242 (501)
T PRK11288 237 M-------VGRE---I---------------------------------------------------------------- 242 (501)
T ss_pred h-------cCCC---c----------------------------------------------------------------
Confidence 0 0000 0
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 676 QLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYAL 755 (1082)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (1082)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccccccE
Q 001411 756 GLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNI 835 (1082)
Q Consensus 756 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I 835 (1082)
.+ .... .+. +. ....+
T Consensus 243 --------------------------------------------------~~------~~~~-~~~-~~------~~~~l 258 (501)
T PRK11288 243 --------------------------------------------------GD------IYGY-RPR-PL------GEVRL 258 (501)
T ss_pred --------------------------------------------------cc------cccc-ccc-CC------CCcEE
Confidence 00 0000 000 00 01148
Q ss_pred EEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCC-HHHHhcceE
Q 001411 836 ELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN-LRSLRRKIG 914 (1082)
Q Consensus 836 ~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-~~~lR~~i~ 914 (1082)
+++|++++ .+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+ .+.+|++++
T Consensus 259 ~~~~~~~~-------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 331 (501)
T PRK11288 259 RLDGLKGP-------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIRAGIM 331 (501)
T ss_pred EEeccccC-------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHhCCCE
Confidence 89999832 3899999999999999999999999999999999999999999999999987554 345678999
Q ss_pred EEcccCc---cc-cccHHHHhccCCCCC--------CHHHHHHHHHHhcHHHHHhhCccccc-ccccCCCCCCChhHHHH
Q 001411 915 LVQQEPA---LF-STTIYENIKYGNEDA--------SEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQLSGGQKQR 981 (1082)
Q Consensus 915 ~VpQdp~---Lf-~gTIreNl~~~~~~~--------~d~ei~~al~~a~l~~~i~~lp~gld-t~v~e~G~~LSgGQrQr 981 (1082)
|+||+|. +| ..|+.+|+.++.... ...+- ...+.+++..+ |++ ........+||||||||
T Consensus 332 ~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qr 404 (501)
T PRK11288 332 LCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWE-----AENADRFIRSL--NIKTPSREQLIMNLSGGNQQK 404 (501)
T ss_pred EcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHH-----HHHHHHHHHhc--CcccCCccCccccCCHHHHHH
Confidence 9999973 55 479999997642110 11110 11122333333 231 12333445799999999
Q ss_pred HHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHh
Q 001411 982 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 982 laLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .+.|||+|||+++.+.. ||++++|++|++++.|++++..
T Consensus 405 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 405 AILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred HHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 999999999999999999999999999999999998875 47899999999999965 9999999999999999998765
Q ss_pred h
Q 001411 1060 R 1060 (1082)
Q Consensus 1060 ~ 1060 (1082)
.
T Consensus 485 ~ 485 (501)
T PRK11288 485 E 485 (501)
T ss_pred H
Confidence 3
No 55
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.5e-71 Score=694.81 Aligned_cols=430 Identities=28% Similarity=0.414 Sum_probs=388.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHH
Q 001411 7 LRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKA 86 (1082)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~ 86 (1082)
+..+..+++.++++++++|.+++++++.+|+++++..++.+..++..++.++..++..+.+.|.++|+++||++|+|+.+
T Consensus 277 ~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~ 356 (708)
T TIGR01193 277 FLDMWILVIVGLFLVRQNMLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAER 356 (708)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHH
Confidence 34455556666778889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 87 IESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLA 166 (1082)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~ 166 (1082)
.++|.+...+..+...+.....+....+..++..+..++++++|++++.+|.+|+|.++++.........|+.++...+.
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~ 436 (708)
T TIGR01193 357 YSKIDSEFGDYLNKSFKYQKADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQP 436 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888877777777777777777778889999999999999999988887777777789999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcH
Q 001411 167 AIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGK 246 (1082)
Q Consensus 167 ~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGK 246 (1082)
.+++++.+.+|+.++++.+++.+... .....+...+.|+++||+|+|+++ +++|+|+||+|+|||+++|+|||||||
T Consensus 437 ~~~~~~~~~~ri~~~l~~~~e~~~~~--~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGK 513 (708)
T TIGR01193 437 KLQAARVANNRLNEVYLVDSEFINKK--KRTELNNLNGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGK 513 (708)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccc--cccCCCCCCCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCH
Confidence 99999999999999997654432111 101112334679999999999743 459999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcC-CCCCCHHHHHHHHHHhchHHH
Q 001411 247 STIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLG-KEDASMDRVIEAAKAANAHSF 325 (1082)
Q Consensus 247 STll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g-~~~~~~~~~~~~~~~~~~~~~ 325 (1082)
|||+++|+|+|+|++|+|++||+|+++++.+++|++|+||||+|+||++||+|||.++ .++.+++++.++|+.++++++
T Consensus 514 STLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~ 593 (708)
T TIGR01193 514 STLAKLLVGFFQARSGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDD 593 (708)
T ss_pred HHHHHHHhccCCCCCcEEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 577889999999999999999
Q ss_pred HhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccc
Q 001411 326 VEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTV 405 (1082)
Q Consensus 326 i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~ 405 (1082)
+.++|+|+||.+||+|.+|||||||||+||||++++|+|||||||||+||+++++.+.+.|.++ +++|+|+||||++.+
T Consensus 594 i~~lp~gldt~i~e~G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~ 672 (708)
T TIGR01193 594 IENMPLGYQTELSEEGSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVA 672 (708)
T ss_pred HHhcccccCcEecCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999885 679999999999999
Q ss_pred ccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHH
Q 001411 406 RDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVN 440 (1082)
Q Consensus 406 ~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 440 (1082)
+.||+|++|++|++++.|+|+|++++++.|+++++
T Consensus 673 ~~~D~i~~l~~G~i~~~G~~~~L~~~~~~y~~l~~ 707 (708)
T TIGR01193 673 KQSDKIIVLDHGKIIEQGSHDELLDRNGFYASLIH 707 (708)
T ss_pred HcCCEEEEEECCEEEEECCHHHHHhcCCcHHHHhh
Confidence 99999999999999999999999999999998864
No 56
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2.1e-72 Score=598.34 Aligned_cols=471 Identities=29% Similarity=0.490 Sum_probs=366.8
Q ss_pred cEEEEEEEEECC--CCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCCCCHH
Q 001411 205 QIEFSEVCFAYP--SRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSLQLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~--~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~~~~ 277 (1082)
-++++|++..|. +....++++|||++++||.+||||+||||||-..+.++|+++. -+|+|.++|.|+-..+..
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 478899988874 3334499999999999999999999999999999999999975 479999999999888877
Q ss_pred HHhh----hceEEccCCCc-Chh--cHHHH----HhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCC
Q 001411 278 WLRE----QMGLVSQEPAL-FAT--SIANN----ILLGKE---DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQ 343 (1082)
Q Consensus 278 ~~~~----~i~~v~Q~~~l-~~~--ti~~n----i~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~ 343 (1082)
.+|. +|++++|||.- .|. ||..- |.+-.. .+..+++.+.++.+++.+- .-.+.....+
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p--------~~rl~~yPHe 157 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEP--------EKRLDAYPHE 157 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCch--------hhhhhhCCcc
Confidence 7764 79999999942 222 54444 333221 1123455566666654321 1123344468
Q ss_pred CChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEE
Q 001411 344 LSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVV 420 (1082)
Q Consensus 344 LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~ 420 (1082)
|||||||||.||-||+.+|++||-||||.|||...+.+|.+.|+++.+ +..+++|||++..+++ ||||+||.+|+++
T Consensus 158 LSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~iv 237 (534)
T COG4172 158 LSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIV 237 (534)
T ss_pred cCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEe
Confidence 999999999999999999999999999999999999999999998853 7899999999999986 8999999999999
Q ss_pred EecCchhhhhcCc-hhHHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCCCchhHH
Q 001411 421 ESGTHVDLISKGG-EYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIW 499 (1082)
Q Consensus 421 ~~g~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (1082)
|.|+.+++.+... .|.+..
T Consensus 238 E~~~t~~lF~~PqHpYTr~L------------------------------------------------------------ 257 (534)
T COG4172 238 ETGTTETLFAAPQHPYTRKL------------------------------------------------------------ 257 (534)
T ss_pred ecCcHHHHhhCCCChHHHHH------------------------------------------------------------
Confidence 9998776654310 111000
Q ss_pred HHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 500 ELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTL 579 (1082)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 579 (1082)
T Consensus 258 -------------------------------------------------------------------------------- 257 (534)
T COG4172 258 -------------------------------------------------------------------------------- 257 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 580 MGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAA 659 (1082)
Q Consensus 580 ~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 659 (1082)
T Consensus 258 -------------------------------------------------------------------------------- 257 (534)
T COG4172 258 -------------------------------------------------------------------------------- 257 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 001411 660 VVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISG 739 (1082)
Q Consensus 660 ~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (1082)
T Consensus 258 -------------------------------------------------------------------------------- 257 (534)
T COG4172 258 -------------------------------------------------------------------------------- 257 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCC
Q 001411 740 FGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQ 819 (1082)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 819 (1082)
++.+|.-.
T Consensus 258 ------------------------------------------------------------------------l~aeP~g~ 265 (534)
T COG4172 258 ------------------------------------------------------------------------LAAEPSGD 265 (534)
T ss_pred ------------------------------------------------------------------------HhcCCCCC
Confidence 00000000
Q ss_pred CCCCCCcccccccccEEEEeEEEECCCCCC--------cccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCc
Q 001411 820 PDDPASKEVTEIKGNIELRNVSFKYPVRPD--------ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPIS 891 (1082)
Q Consensus 820 ~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~--------~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~ 891 (1082)
+. +.+.....-++.+||...|+-+++ ..++++|||+.++||++||||+|||||||+-.+|+|+.+++
T Consensus 266 ~~----p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~- 340 (534)
T COG4172 266 PP----PLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ- 340 (534)
T ss_pred CC----CCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-
Confidence 00 000011123777777777763321 24789999999999999999999999999999999999876
Q ss_pred cEEEECCccCCCCCHHH---HhcceEEEcccCc--ccc-ccHHHHhccC----CCCCC----HHHHHHHHHHhcHHHHHh
Q 001411 892 GTVLIDGYDIRTLNLRS---LRRKIGLVQQEPA--LFS-TTIYENIKYG----NEDAS----EIELMKATKAANAHGFIS 957 (1082)
Q Consensus 892 G~I~idG~di~~i~~~~---lR~~i~~VpQdp~--Lf~-gTIreNl~~~----~~~~~----d~ei~~al~~a~l~~~i~ 957 (1082)
|+|.++|.+|...+.+. +|+++-+|+|||+ |=+ .||.+-|.-| .|..+ |+.+.+|++.+|++.-..
T Consensus 341 G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~r 420 (534)
T COG4172 341 GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPATR 420 (534)
T ss_pred ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhHh
Confidence 99999999999988765 6899999999997 322 3665555433 23334 455778888888865432
Q ss_pred hCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhh
Q 001411 958 RMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTI 1035 (1082)
Q Consensus 958 ~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti 1035 (1082)
. .-...||||||||||||||++-+|++++||||||+||..-..+|.+.++++.+ +-+-++|||+|..+
T Consensus 421 ~----------RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~Vv 490 (534)
T COG4172 421 N----------RYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVV 490 (534)
T ss_pred h----------cCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHH
Confidence 1 12356999999999999999999999999999999999999999999998753 67999999999999
Q ss_pred hc-cCEEEEEeCCEEEEecChHHHhhhccchHHHHH
Q 001411 1036 RN-ADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLI 1070 (1082)
Q Consensus 1036 ~~-~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~ 1070 (1082)
+. ||+|+||.+|+|||+|+-+++++++...|.+-+
T Consensus 491 rAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~~L 526 (534)
T COG4172 491 RALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTRAL 526 (534)
T ss_pred HHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHHHH
Confidence 76 999999999999999999999998888887643
No 57
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.9e-72 Score=674.93 Aligned_cols=463 Identities=21% Similarity=0.388 Sum_probs=353.5
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHh-hhc
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLR-EQM 283 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~-~~i 283 (1082)
.++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...++ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999974 3499999999999999999999999999999999999999999999999999877665554 469
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCCCC--HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhccc
Q 001411 284 GLVSQEPALFAT-SIANNILLGKEDAS--MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLR 360 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~~~--~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~ 360 (1082)
+|++|++.+++. |++||+.++..... .+++.++++.. |++........+||||||||++|||||+.
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgG~~qrv~la~aL~~ 157 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAAL-----------GCQLDLDSSAGSLEVADRQIVEILRGLMR 157 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHc-----------CCCccccCChhhCCHHHHHHHHHHHHHHc
Confidence 999999988876 99999998753211 12233333333 33333445556899999999999999999
Q ss_pred CCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhcCchhHHH
Q 001411 361 NPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGGEYAAL 438 (1082)
Q Consensus 361 ~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 438 (1082)
+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.... .
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~-----~ 232 (510)
T PRK15439 158 DSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD-----I 232 (510)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH-----H
Confidence 999999999999999999999999998874 47899999999998864 8999999999999888766543210 0
Q ss_pred HHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCCCchhHHHHHHHhcchhHHHHHHHHH
Q 001411 439 VNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVG 518 (1082)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (1082)
......
T Consensus 233 ~~~~~~-------------------------------------------------------------------------- 238 (510)
T PRK15439 233 IQAITP-------------------------------------------------------------------------- 238 (510)
T ss_pred HHHHhC--------------------------------------------------------------------------
Confidence 000000
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001411 519 AILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILS 598 (1082)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~ 598 (1082)
....
T Consensus 239 ------------------------~~~~---------------------------------------------------- 242 (510)
T PRK15439 239 ------------------------AARE---------------------------------------------------- 242 (510)
T ss_pred ------------------------cccc----------------------------------------------------
Confidence 0000
Q ss_pred CCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 599 NEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLF 678 (1082)
Q Consensus 599 ~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~ 678 (1082)
..+ .. .
T Consensus 243 ~~~---~~----~------------------------------------------------------------------- 248 (510)
T PRK15439 243 KSL---SA----S------------------------------------------------------------------- 248 (510)
T ss_pred ccc---cc----c-------------------------------------------------------------------
Confidence 000 00 0
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 679 LKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLW 758 (1082)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (1082)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccccccEEEE
Q 001411 759 YASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELR 838 (1082)
Q Consensus 759 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~ 838 (1082)
.+. .. ..+...+..+ +.+..|+++
T Consensus 249 -----------------------------------------------~~~-~~--~~~~~~~~~~------~~~~~l~~~ 272 (510)
T PRK15439 249 -----------------------------------------------QKL-WL--ELPGNRRQQA------AGAPVLTVE 272 (510)
T ss_pred -----------------------------------------------ccc-cc--cccccccccC------CCCceEEEe
Confidence 000 00 0000000000 001148999
Q ss_pred eEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHH-HhcceEEEc
Q 001411 839 NVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS-LRRKIGLVQ 917 (1082)
Q Consensus 839 ~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~i~~Vp 917 (1082)
|++. .+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++...+... +|++|+|||
T Consensus 273 ~l~~--------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~ 344 (510)
T PRK15439 273 DLTG--------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVYLP 344 (510)
T ss_pred CCCC--------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEECC
Confidence 9983 1599999999999999999999999999999999999999999999999998776654 467899999
Q ss_pred ccC---cccc-ccHHHHhccCC----CC-CCHHHHHHHHHHhcHHHHHhhCccccc-ccccCCCCCCChhHHHHHHHHHH
Q 001411 918 QEP---ALFS-TTIYENIKYGN----ED-ASEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 918 Qdp---~Lf~-gTIreNl~~~~----~~-~~d~ei~~al~~a~l~~~i~~lp~gld-t~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|++ .+|. .|+.+|+.... +. ....+. +..+.++++.+ |++ .........||||||||++||||
T Consensus 345 q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~LSgG~kqrl~la~a 417 (510)
T PRK15439 345 EDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARE-----NAVLERYRRAL--NIKFNHAEQAARTLSGGNQQKVLIAKC 417 (510)
T ss_pred CChhhCCccCCCcHHHHHHhhhhhhhccccChHHH-----HHHHHHHHHHc--CCCCCCccCccccCCcHHHHHHHHHHH
Confidence 996 3665 49999985320 10 011111 11123334443 333 23344456799999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|+.+|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 418 l~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 492 (510)
T PRK15439 418 LEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAINV 492 (510)
T ss_pred HhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccCCH
Confidence 999999999999999999999999999999875 47899999999999976 99999999999999999988764
No 58
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=6.3e-71 Score=605.40 Aligned_cols=496 Identities=24% Similarity=0.340 Sum_probs=447.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHH
Q 001411 555 VALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLS 634 (1082)
Q Consensus 555 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~ 634 (1082)
...+.+++.++.+++-+++..+..+.+.++..+++..+|...+++|..- +..|+=. .--+|.+++++++...-.
T Consensus 65 Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~-----~~~g~~~-Q~LrDL~qvR~Fltg~g~ 138 (580)
T COG4618 65 LTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLR-----RGSGDGL-QPLRDLDQVRQFLTGTGL 138 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhh-----cCCCccc-cchhhHHHHHHHHcCCCc
Confidence 3344445556677788899999999999999999999999998777652 2233211 123699999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHH
Q 001411 635 IIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEK 714 (1082)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~ 714 (1082)
..+.+....-+++.++|.++++++++.++...+++...++..+..++..++..+...+.+.+...+.++.++|+++|+..
T Consensus 139 ~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~ 218 (580)
T COG4618 139 TAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLG 218 (580)
T ss_pred chhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccH
Confidence 88888888999999999999999999999888888888888888887777888888888899999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 715 RISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLAL 794 (1082)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1082)
...++|.+....+...+.+.+-..+....++..+-.......+.+|.+++..+++|.|.+++.-..+.....++..++..
T Consensus 219 ~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~ 298 (580)
T COG4618 219 NLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIAN 298 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHH
Confidence 99999999999888888888888888888899999999999999999999999999999999888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCC
Q 001411 795 APDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGS 874 (1082)
Q Consensus 795 ~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGS 874 (1082)
|.++..+..+..|+.+.+...|+..+ ..+.|..+|.+.++++++.-|+. ++|+|+|+||+++|||-+||+|||||
T Consensus 299 Wkq~~~Ar~s~~Rl~~lL~~~p~~~~----~m~LP~P~g~L~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgS 373 (580)
T COG4618 299 WKQFVAARQSYKRLNELLAELPAAAE----RMPLPAPQGALSVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGS 373 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHhCccccC----CCCCCCCCceeeEeeeeecCCCC-CCcceecceeEecCCceEEEECCCCc
Confidence 99999999999999999987654332 23345567999999999976643 56999999999999999999999999
Q ss_pred CHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHH
Q 001411 875 GKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHG 954 (1082)
Q Consensus 875 GKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~ 954 (1082)
|||||.++|.|.+.|++|+|++||-|+++++.+++-++|||.|||..||+|||+|||.-+.++.+++.|.+|++.++.||
T Consensus 374 GKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHe 453 (580)
T COG4618 374 GKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHE 453 (580)
T ss_pred cHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHH
Confidence 99999999999999999999999999999999999999999999999999999999998778899999999999999999
Q ss_pred HHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCch
Q 001411 955 FISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLS 1033 (1082)
Q Consensus 955 ~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ 1033 (1082)
.|.++|+||||.||++|..|||||||||+||||++.+|++++||||-||||.+-|+.+.++|.+.. +|+|+|+||||++
T Consensus 454 lIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs 533 (580)
T COG4618 454 LILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPS 533 (580)
T ss_pred HHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999875 6999999999999
Q ss_pred hhhccCEEEEEeCCEEEEecChHHHhhh
Q 001411 1034 TIRNADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 1034 ti~~~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
.+..+|+|+||++|++..+|+-+|.+++
T Consensus 534 ~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 534 ALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred HHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 9999999999999999999999999874
No 59
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.5e-71 Score=691.36 Aligned_cols=424 Identities=30% Similarity=0.455 Sum_probs=386.6
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHH
Q 001411 6 ALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAK 85 (1082)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 85 (1082)
.+..+..+++.++++++++|.++++.++.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||.+++|+.
T Consensus 266 ~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 345 (694)
T TIGR03375 266 ALIDLPFALLFLLVIAIIGGPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGR 345 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHH
Confidence 34455556666778889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 86 AIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNL 165 (1082)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~ 165 (1082)
+.++|.+...+..+...+..+.......+..++..+..++++++|++++.+|.+|+|.+++++.+......|+..+...+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~ 425 (694)
T TIGR03375 346 FQRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLL 425 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888888888777777777788888999999999999999998888777777778999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCc
Q 001411 166 AAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSG 245 (1082)
Q Consensus 166 ~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsG 245 (1082)
..+..++.+.+|+.++++.+++.+.. ......+...+.|+++||+|+|++..+++|+|+||+|+|||+++|+|+||||
T Consensus 426 ~~~~~~~~~~~ri~~il~~~~e~~~~--~~~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsG 503 (694)
T TIGR03375 426 TRYQQAKTALQSLDELMQLPVERPEG--TRFLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSG 503 (694)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCC--CCCCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCC
Confidence 99999999999999999765542211 1111112234679999999999865556999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHH
Q 001411 246 KSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSF 325 (1082)
Q Consensus 246 KSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~ 325 (1082)
||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||+|+|++|++||+|||.+++|+.++++++++++.++++++
T Consensus 504 KSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~ 583 (694)
T TIGR03375 504 KSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEF 583 (694)
T ss_pred HHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred HhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccc
Q 001411 326 VEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTV 405 (1082)
Q Consensus 326 i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~ 405 (1082)
++++|+|+||.+||+|.+||||||||++||||++++|+|+|||||||+||+++++.+.+.|.++.+++|+|+||||++++
T Consensus 584 i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~ 663 (694)
T TIGR03375 584 VRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLL 663 (694)
T ss_pred HHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred ccCCEEEEEeCCEEEEecCchhhhhc
Q 001411 406 RDVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 406 ~~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
+.||+|++|++|++++.|+|+||+++
T Consensus 664 ~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 664 DLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred HhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 99999999999999999999999864
No 60
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.5e-72 Score=674.85 Aligned_cols=460 Identities=23% Similarity=0.388 Sum_probs=347.1
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC--CCcEEEECCeeCCCCCHHH-Hhhh
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP--TSGKILLDGHDLKSLQLKW-LREQ 282 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~--~~G~i~~~g~~~~~~~~~~-~~~~ 282 (1082)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++...+... .++.
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 689999999974 3499999999999999999999999999999999999987 7999999999998766543 4567
Q ss_pred ceEEccCCCcChh-cHHHHHhcCCCC------CCHHHHHHHHHHhchHHHHhcCCCCccccc-cCCCCCCChHHHHHHHH
Q 001411 283 MGLVSQEPALFAT-SIANNILLGKED------ASMDRVIEAAKAANAHSFVEGLPDGYQTQV-GEGGTQLSGGQKQRIAI 354 (1082)
Q Consensus 283 i~~v~Q~~~l~~~-ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~-g~~g~~LSgGqkqri~l 354 (1082)
++||+|++.+++. |++||+.++... ...++..+ .+.+.++.+ |+.... .....+||||||||++|
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~i 152 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYL-----RAKNLLREL--QLDADNVTRPVGDYGGGQQQLVEI 152 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHH-----HHHHHHHHc--CCCCCcccCchhhCCHHHHHHHHH
Confidence 9999999988776 999999886421 11122111 112233333 332221 23356899999999999
Q ss_pred HHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhcC
Q 001411 355 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 432 (1082)
Q Consensus 355 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 432 (1082)
||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+++..|+.+++...
T Consensus 153 A~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~- 231 (500)
T TIGR02633 153 AKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED- 231 (500)
T ss_pred HHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH-
Confidence 999999999999999999999999999999998874 46899999999999865 899999999999866532211000
Q ss_pred chhHHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCCCchhHHHHHHHhcchhHHH
Q 001411 433 GEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYA 512 (1082)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (1082)
. ..
T Consensus 232 ----------------------------------------------------------------~---~~---------- 234 (500)
T TIGR02633 232 ----------------------------------------------------------------D---II---------- 234 (500)
T ss_pred ----------------------------------------------------------------H---HH----------
Confidence 0 00
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 513 VLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSM 592 (1082)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 592 (1082)
..
T Consensus 235 -------------------------~~----------------------------------------------------- 236 (500)
T TIGR02633 235 -------------------------TM----------------------------------------------------- 236 (500)
T ss_pred -------------------------HH-----------------------------------------------------
Confidence 00
Q ss_pred HHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 593 FSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAF 672 (1082)
Q Consensus 593 ~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~ 672 (1082)
. +.. +.
T Consensus 237 ---~-------~~~---~~------------------------------------------------------------- 242 (500)
T TIGR02633 237 ---M-------VGR---EI------------------------------------------------------------- 242 (500)
T ss_pred ---H-------hCc---cc-------------------------------------------------------------
Confidence 0 000 00
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 673 VAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCS 752 (1082)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1082)
T Consensus 243 -------------------------------------------------------------------------------- 242 (500)
T TIGR02633 243 -------------------------------------------------------------------------------- 242 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCccccccc
Q 001411 753 YALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIK 832 (1082)
Q Consensus 753 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~ 832 (1082)
. ...+. .+. +. .+
T Consensus 243 -----------------------------------------------------~------~~~~~-~~~-~~------~~ 255 (500)
T TIGR02633 243 -----------------------------------------------------T------SLYPH-EPH-EI------GD 255 (500)
T ss_pred -----------------------------------------------------c------ccccc-ccc-CC------CC
Confidence 0 00000 000 00 01
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-CccEEEECCccCCCCCH-HHHh
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-ISGTVLIDGYDIRTLNL-RSLR 910 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-~~G~I~idG~di~~i~~-~~lR 910 (1082)
..|+++|++++|+...+.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.++|.++...+. ..+|
T Consensus 256 ~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~ 335 (500)
T TIGR02633 256 VILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIR 335 (500)
T ss_pred ceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHh
Confidence 149999999999422234699999999999999999999999999999999999995 89999999999875443 5678
Q ss_pred cceEEEcccC---cccc-ccHHHHhccCCCC-------CCHHHHHHHHHHhcHHHHHhhCcccccc-cccCCCCCCChhH
Q 001411 911 RKIGLVQQEP---ALFS-TTIYENIKYGNED-------ASEIELMKATKAANAHGFISRMPEGYQS-HVGDRGVQLSGGQ 978 (1082)
Q Consensus 911 ~~i~~VpQdp---~Lf~-gTIreNl~~~~~~-------~~d~ei~~al~~a~l~~~i~~lp~gldt-~v~e~G~~LSgGQ 978 (1082)
++++||||++ .+|+ .|+++|+.++... ....+ ....+.++++.+ |+.. ........|||||
T Consensus 336 ~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~~~~~~~~LSgGq 408 (500)
T TIGR02633 336 AGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAA-----ELQIIGSAIQRL--KVKTASPFLPIGRLSGGN 408 (500)
T ss_pred CCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHH-----HHHHHHHHHHhc--CccCCCccCccccCCHHH
Confidence 8999999997 3665 5999999874210 11111 111122333333 2321 1233445799999
Q ss_pred HHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChH
Q 001411 979 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHE 1056 (1082)
Q Consensus 979 rQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~ 1056 (1082)
|||++|||||+++|++|||||||++||+.+.+.+++.|++.. ++.|||+|||+++.+.. ||+|++|++|+++..++..
T Consensus 409 kqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~~~ 488 (500)
T TIGR02633 409 QQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFVNH 488 (500)
T ss_pred HHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccc
Confidence 999999999999999999999999999999999999998864 47899999999999965 9999999999999877655
Q ss_pred HH
Q 001411 1057 QL 1058 (1082)
Q Consensus 1057 eL 1058 (1082)
++
T Consensus 489 ~~ 490 (500)
T TIGR02633 489 AL 490 (500)
T ss_pred cC
Confidence 43
No 61
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-73 Score=613.67 Aligned_cols=422 Identities=34% Similarity=0.482 Sum_probs=373.2
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 001411 22 TSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQG 101 (1082)
Q Consensus 22 ~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~ 101 (1082)
.++|+.++++++++.++..+...+..+..+..++...++.+..+...+++-+.++||.|+.|+.+.++|.+...++.+..
T Consensus 356 ~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E 435 (790)
T KOG0056|consen 356 KFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQE 435 (790)
T ss_pred hHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHH
Confidence 46888999998888888887777777888888888888888889999999999999999999999999999888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 102 KKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISI 181 (1082)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~ 181 (1082)
.|....-.+.+.....+..+..+....+.+|+|..+.+|+|+...+..+++....|++.+......++....-+++++++
T Consensus 436 ~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdl 515 (790)
T KOG0056|consen 436 WKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDL 515 (790)
T ss_pred HHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHH
Confidence 66544433333333333333333333455688889999999977667778888899999999999999999999999999
Q ss_pred HhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCC
Q 001411 182 IKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTS 261 (1082)
Q Consensus 182 l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~ 261 (1082)
++++++..+.+. ..+.....|.|+|+||+|.|+.+ +++|+||||+++||+.+|+|||||+||||++++|.++++.++
T Consensus 516 lkee~eVvd~P~--a~pl~~~~G~i~fsnvtF~Y~p~-k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~s 592 (790)
T KOG0056|consen 516 LKEEPEVVDLPG--APPLKVTQGKIEFSNVTFAYDPG-KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNS 592 (790)
T ss_pred hhcCchhhcCCC--CCCccccCCeEEEEEeEEecCCC-CceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccC
Confidence 988776542221 12223346889999999999653 469999999999999999999999999999999999999999
Q ss_pred cEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCC
Q 001411 262 GKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGG 341 (1082)
Q Consensus 262 G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g 341 (1082)
|.|.+||+|+++....++|++||+||||..|||+||..||.+++|.+++|++.+|++.+++||.|..+|+||+|.|||+|
T Consensus 593 GsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERG 672 (790)
T KOG0056|consen 593 GSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERG 672 (790)
T ss_pred ceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEE
Q 001411 342 TQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVE 421 (1082)
Q Consensus 342 ~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~ 421 (1082)
-.|||||||||||||+++++|.|++|||+|||||..+|+.|+.++.++..++|.|+|+||++++-+||.|+++++|+|+|
T Consensus 673 LkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvE 752 (790)
T KOG0056|consen 673 LKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVE 752 (790)
T ss_pred cccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCchhhhhc-CchhHHHHHhhhccc
Q 001411 422 SGTHVDLISK-GGEYAALVNLQSSEH 446 (1082)
Q Consensus 422 ~g~~~~l~~~-~~~~~~~~~~~~~~~ 446 (1082)
.|+|+||+++ +|.|++||+.|+...
T Consensus 753 rG~HeeLl~rdgG~Ya~MWq~qqa~g 778 (790)
T KOG0056|consen 753 RGRHEELLKRDGGAYADMWQAQQAMG 778 (790)
T ss_pred cCcHHHHHhccCCcHHHHHHHHHhcC
Confidence 9999999988 889999998776543
No 62
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.9e-71 Score=672.11 Aligned_cols=432 Identities=26% Similarity=0.378 Sum_probs=383.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcc
Q 001411 4 GHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAV-AGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVG 82 (1082)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~ 82 (1082)
+.++..+..+++.++++++++|.+++++++++|++.+ +..++.++.++..++.++..++..+.+.|.++|+++||+|+.
T Consensus 139 ~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~ 218 (574)
T PRK11160 139 SPLVAALVVILVLTIGLSFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGA 218 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCC
Confidence 3455666677777888899999999998888887655 446677777888888888999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH-HHHHHHHHHH
Q 001411 83 EAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINV-IFSGFALGQA 161 (1082)
Q Consensus 83 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~-~~~~~~l~~~ 161 (1082)
|+.+.+++++..++..+...+..+..+....+..++..+..++++++|++++ +|.+++|.+++++.+. +....++..+
T Consensus 219 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l 297 (574)
T PRK11160 219 EDRYRQQLEQTEQQWLAAQRRQANLTGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPV 297 (574)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888888777777777777788889999884 7889999877765443 2234567777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcC
Q 001411 162 APNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGP 241 (1082)
Q Consensus 162 ~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~ 241 (1082)
...+..++++..+++|+.++++.+++.+++.. . ......+.|+++||+|+|++.++++|+|+||+++|||+++|+||
T Consensus 298 ~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~~~-~--~~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~ 374 (574)
T PRK11160 298 AGAFQHLGQVIASARRINEITEQKPEVTFPTT-S--TAAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGR 374 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcc-c--CCCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECC
Confidence 78888999999999999999986554221111 1 11122457999999999986444699999999999999999999
Q ss_pred CCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhc
Q 001411 242 SGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAAN 321 (1082)
Q Consensus 242 sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~ 321 (1082)
||||||||+++|+|+++|++|+|.+||+++++++.+++|++|+||+|+|++|++||+|||.++.|+.+++++.++++.++
T Consensus 375 sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~ 454 (574)
T PRK11160 375 TGCGKSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVG 454 (574)
T ss_pred CCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred hHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccC
Q 001411 322 AHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHR 401 (1082)
Q Consensus 322 ~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~ 401 (1082)
+++++++ |+||||.+||+|.+||||||||++||||++++|+|+|||||||+||+++++.+.+.+.++.+++|+|+||||
T Consensus 455 l~~~i~~-p~GldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr 533 (574)
T PRK11160 455 LEKLLED-DKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHR 533 (574)
T ss_pred CHHHHcC-ccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 9999999 999999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred ccccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHH
Q 001411 402 LSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVN 440 (1082)
Q Consensus 402 ~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 440 (1082)
++.++.||+|++|++|++++.|+|+|++++++.|+++++
T Consensus 534 ~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~g~y~~l~~ 572 (574)
T PRK11160 534 LTGLEQFDRICVMDNGQIIEQGTHQELLAQQGRYYQLKQ 572 (574)
T ss_pred hhHHHhCCEEEEEeCCeEEEeCCHHHHHhcCcHHHHHHh
Confidence 999999999999999999999999999999999999875
No 63
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-71 Score=666.73 Aligned_cols=454 Identities=22% Similarity=0.373 Sum_probs=345.7
Q ss_pred EEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCH-HHHhhhceEE
Q 001411 208 FSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL-KWLREQMGLV 286 (1082)
Q Consensus 208 ~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~~~~i~~v 286 (1082)
++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..+++.++|+
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999974 349999999999999999999999999999999999999999999999999876543 3456789999
Q ss_pred ccCCCcChh-cHHHHHhcCCCC-----CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhccc
Q 001411 287 SQEPALFAT-SIANNILLGKED-----ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLR 360 (1082)
Q Consensus 287 ~Q~~~l~~~-ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~ 360 (1082)
+|++.++.. |++||+.++... .+.++..+ .+.+.++.+ |++........+||||||||++|||||+.
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~~ 151 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR-----DTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFSY 151 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHHh
Confidence 999987765 999999876421 11121111 122334443 45545566677899999999999999999
Q ss_pred CCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhcCchhHHH
Q 001411 361 NPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGGEYAAL 438 (1082)
Q Consensus 361 ~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 438 (1082)
+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++... ..
T Consensus 152 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-----~~ 226 (491)
T PRK10982 152 NAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD-----KI 226 (491)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH-----HH
Confidence 999999999999999999999999998874 47899999999998864 899999999999987754332100 00
Q ss_pred HHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCCCchhHHHHHHHhcchhHHHHHHHHH
Q 001411 439 VNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVG 518 (1082)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (1082)
.
T Consensus 227 ~------------------------------------------------------------------------------- 227 (491)
T PRK10982 227 I------------------------------------------------------------------------------- 227 (491)
T ss_pred H-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001411 519 AILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILS 598 (1082)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~ 598 (1082)
. ..
T Consensus 228 -------------------~--------------------------------------------------------~~-- 230 (491)
T PRK10982 228 -------------------A--------------------------------------------------------MM-- 230 (491)
T ss_pred -------------------H--------------------------------------------------------HH--
Confidence 0 00
Q ss_pred CCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 599 NEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLF 678 (1082)
Q Consensus 599 ~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~ 678 (1082)
+... .
T Consensus 231 -----~~~~---~------------------------------------------------------------------- 235 (491)
T PRK10982 231 -----VGRS---L------------------------------------------------------------------- 235 (491)
T ss_pred -----hCCC---c-------------------------------------------------------------------
Confidence 0000 0
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 679 LKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLW 758 (1082)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (1082)
T Consensus 236 -------------------------------------------------------------------------------- 235 (491)
T PRK10982 236 -------------------------------------------------------------------------------- 235 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccccccEEEE
Q 001411 759 YASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELR 838 (1082)
Q Consensus 759 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~ 838 (1082)
.+ ..+. +..+ +.+..|+++
T Consensus 236 -----------------------------------------------~~------~~~~--~~~~------~~~~~i~~~ 254 (491)
T PRK10982 236 -----------------------------------------------TQ------RFPD--KENK------PGEVILEVR 254 (491)
T ss_pred -----------------------------------------------cc------cccc--ccCC------CCCcEEEEe
Confidence 00 0000 0000 001249999
Q ss_pred eEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHH-HHhcceEEEc
Q 001411 839 NVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR-SLRRKIGLVQ 917 (1082)
Q Consensus 839 ~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~-~lR~~i~~Vp 917 (1082)
|++++|. ++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+.. .+|+.++|+|
T Consensus 255 ~l~~~~~-----~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~ 329 (491)
T PRK10982 255 NLTSLRQ-----PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFALVT 329 (491)
T ss_pred CcccccC-----cccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCEEcC
Confidence 9998752 489999999999999999999999999999999999999999999999999876654 4578899999
Q ss_pred ccCc---ccc-ccHHHH-----hccCCCC---CCHHHHHHHHHHhcHHHHHhhCccccc-ccccCCCCCCChhHHHHHHH
Q 001411 918 QEPA---LFS-TTIYEN-----IKYGNED---ASEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 918 Qdp~---Lf~-gTIreN-----l~~~~~~---~~d~ei~~al~~a~l~~~i~~lp~gld-t~v~e~G~~LSgGQrQrlaL 984 (1082)
|++. +|+ .|+.+| +...... .+..+.. ..+.++++.+ |+. ........+||||||||++|
T Consensus 330 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qrv~l 402 (491)
T PRK10982 330 EERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMK-----SDTQWVIDSM--RVKTPGHRTQIGSLSGGNQQKVII 402 (491)
T ss_pred CchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHH-----HHHHHHHHhc--CccCCCcccccccCCcHHHHHHHH
Confidence 9963 565 477666 3321110 1111111 1122333433 221 12344456799999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHh
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
|||++++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. |||+++|++|+++..++++++.
T Consensus 403 a~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 479 (491)
T PRK10982 403 GRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIVDTKTTT 479 (491)
T ss_pred HHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 999999999999999999999999999999998864 58999999999999965 9999999999999888775443
No 64
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3e-68 Score=689.53 Aligned_cols=220 Identities=27% Similarity=0.426 Sum_probs=185.5
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhc
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 283 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 283 (1082)
..|+++|+++.|++.++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. +...+|+.+
T Consensus 927 ~~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~I 1005 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSL 1005 (2272)
T ss_pred ceEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcE
Confidence 3699999999996333459999999999999999999999999999999999999999999999999864 456678899
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhccc
Q 001411 284 GLVSQEPALFAT-SIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLR 360 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~ 360 (1082)
|||+|++.+|+. |++|||.++... .+.++..+ .+.+.++.+ |++........+||||||||++|||||+.
T Consensus 1006 G~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~-----~v~~lL~~v--gL~~~~~~~~~~LSGGqKQRLsLArALi~ 1078 (2272)
T TIGR01257 1006 GMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL-----EMEAMLEDT--GLHHKRNEEAQDLSGGMQRKLSVAIAFVG 1078 (2272)
T ss_pred EEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHHc
Confidence 999999999876 999999874211 11111111 111223333 44444556667899999999999999999
Q ss_pred CCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhc
Q 001411 361 NPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 361 ~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
+|+++|||||||+||+.+++.+++.|+++++++|+|++||+++.+.. ||||++|++|++++.|++++|.++
T Consensus 1079 ~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~ 1150 (2272)
T TIGR01257 1079 DAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNC 1150 (2272)
T ss_pred CCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHh
Confidence 99999999999999999999999999998778999999999999875 899999999999999999998765
No 65
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.8e-71 Score=664.00 Aligned_cols=452 Identities=21% Similarity=0.294 Sum_probs=342.7
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
|+++|++++|++. .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 4 l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~ 81 (490)
T PRK10938 4 LQISQGTFRLSDT--KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSD 81 (490)
T ss_pred EEEEeEEEEcCCe--eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhce
Confidence 8899999999753 49999999999999999999999999999999999999999999999988876666667778999
Q ss_pred EccCCCc--C-------hhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 286 VSQEPAL--F-------ATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 286 v~Q~~~l--~-------~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
++|++.+ + ..|+++|+.++. ...+++.++++..++.+. ......+||||||||++|||
T Consensus 82 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la~ 148 (490)
T PRK10938 82 EWQRNNTDMLSPGEDDTGRTTAEIIQDEV--KDPARCEQLAQQFGITAL-----------LDRRFKYLSTGETRKTLLCQ 148 (490)
T ss_pred eccCcchhhcccchhhccccHHHhcccch--hHHHHHHHHHHHcCCHhh-----------hhCCcccCCHHHHHHHHHHH
Confidence 9998753 2 358999886542 113344455555544332 33445689999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC-CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhcCch
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIMS-NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGGE 434 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 434 (1082)
||+.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|+|||+++.+.. ||+|++|++|+++..|+++++.... .
T Consensus 149 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~-~ 227 (490)
T PRK10938 149 ALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA-L 227 (490)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch-h
Confidence 99999999999999999999999999999988754 6899999999998865 8999999999999888765543210 0
Q ss_pred hHHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCCCchhHHHHHHHhcchhHHHHH
Q 001411 435 YAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVL 514 (1082)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (1082)
...+..
T Consensus 228 ~~~~~~-------------------------------------------------------------------------- 233 (490)
T PRK10938 228 VAQLAH-------------------------------------------------------------------------- 233 (490)
T ss_pred hhhhhh--------------------------------------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 515 GSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFS 594 (1082)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 594 (1082)
..
T Consensus 234 ------------------------------~~------------------------------------------------ 235 (490)
T PRK10938 234 ------------------------------SE------------------------------------------------ 235 (490)
T ss_pred ------------------------------hh------------------------------------------------
Confidence 00
Q ss_pred HHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 595 AILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVA 674 (1082)
Q Consensus 595 ~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~ 674 (1082)
.+ ... ..+.
T Consensus 236 -----~~--~~~-~~~~--------------------------------------------------------------- 244 (490)
T PRK10938 236 -----QL--EGV-QLPE--------------------------------------------------------------- 244 (490)
T ss_pred -----cc--Ccc-ccCc---------------------------------------------------------------
Confidence 00 000 0000
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 675 EQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYA 754 (1082)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (1082)
T Consensus 245 -------------------------------------------------------------------------------- 244 (490)
T PRK10938 245 -------------------------------------------------------------------------------- 244 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCccccccccc
Q 001411 755 LGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGN 834 (1082)
Q Consensus 755 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~ 834 (1082)
.. .+.. +.... .....
T Consensus 245 ---------------------------------------------------------~~-~~~~-~~~~~-----~~~~~ 260 (490)
T PRK10938 245 ---------------------------------------------------------PD-EPSA-RHALP-----ANEPR 260 (490)
T ss_pred ---------------------------------------------------------cc-cccc-ccccC-----CCCce
Confidence 00 0000 00000 01124
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-CccEEEECCccCCC-CCHHHHhcc
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-ISGTVLIDGYDIRT-LNLRSLRRK 912 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-~~G~I~idG~di~~-i~~~~lR~~ 912 (1082)
|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.++|.++.. .+...+|++
T Consensus 261 l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 337 (490)
T PRK10938 261 IVLNNGVVSYN---DRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKH 337 (490)
T ss_pred EEEeceEEEEC---CeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhh
Confidence 99999999996 34699999999999999999999999999999999998875 69999999987642 234457889
Q ss_pred eEEEcccCcccc---ccHHHHhccCCC-------CCC---HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 913 IGLVQQEPALFS---TTIYENIKYGNE-------DAS---EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 913 i~~VpQdp~Lf~---gTIreNl~~~~~-------~~~---d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
|+|+||++.++. .|+++++.++.. ... ++++.++++..++.+. ........||||||
T Consensus 338 i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgGq~ 407 (490)
T PRK10938 338 IGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKR----------TADAPFHSLSWGQQ 407 (490)
T ss_pred ceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchh----------hccCchhhCCHHHH
Confidence 999999987642 467777653211 011 1234444444444320 22334467999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC-C-ceEEEEecCchhhhc--cCEEEEEeCCEEEEec
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME-G-RTTIMVAHRLSTIRN--ADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~-~-~TvI~IaHrl~ti~~--~DrI~Vl~~G~ive~G 1053 (1082)
||++|||||+++|++|||||||++||+.+.+.+.+.|++..+ + .|||+|||+++.+.. ||++++|++|+|++.-
T Consensus 408 qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 408 RLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred HHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceEEee
Confidence 999999999999999999999999999999999999998753 4 479999999999964 7999999999998753
No 66
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.4e-69 Score=674.96 Aligned_cols=431 Identities=35% Similarity=0.487 Sum_probs=392.1
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHH
Q 001411 9 YLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIE 88 (1082)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~ 88 (1082)
.+...++.++++++++|.+++++++++|+++++..++.+..++..++..+..++..+.+.|.++|+++||++|.|+.+.+
T Consensus 262 ~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~ 341 (694)
T TIGR01846 262 DLLFVVVFLAVMFFYSPTLTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQN 341 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHH
Confidence 34444555677889999999999999999988888888888888888888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 89 SYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAI 168 (1082)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~ 168 (1082)
+|.+...+..+...+..+..+....+..++..+..++++++|++++.+|.+|+|.++++.........|+..+...+..+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~ 421 (694)
T TIGR01846 342 RWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDF 421 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888887777777777888888999999999999999998887766666778999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHH
Q 001411 169 AKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKST 248 (1082)
Q Consensus 169 ~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKST 248 (1082)
++++.+++|+.++++.+++.+ .. .....+...+.|+++||+|+|++..+++|+|+||+++|||+++|+|+|||||||
T Consensus 422 ~~~~~~~~ri~~~l~~~~e~~-~~--~~~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKST 498 (694)
T TIGR01846 422 QQTGIALERLGDILNSPTEPR-SA--GLAALPELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKST 498 (694)
T ss_pred HHHHHHHHHHHHHHcCCCCcc-CC--CCCCCCCCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHH
Confidence 999999999999997654422 11 111122334679999999999755456999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhc
Q 001411 249 IISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEG 328 (1082)
Q Consensus 249 ll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~ 328 (1082)
|+++|+|+|+|++|+|.+||+|+++++.+++|++|+||+|+|++|++||+|||.++.|+.+++++.++|+.+++++++.+
T Consensus 499 L~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~ 578 (694)
T TIGR01846 499 LTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISE 578 (694)
T ss_pred HHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred CCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccC
Q 001411 329 LPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDV 408 (1082)
Q Consensus 329 lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~ 408 (1082)
+|+|+||.+|++|.+||||||||++||||++++|+|+|||||||+||+++++.+.+.|.++.+++|+|+||||++.++.|
T Consensus 579 lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~ 658 (694)
T TIGR01846 579 LPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRAC 658 (694)
T ss_pred CcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred CEEEEEeCCEEEEecCchhhhhcCchhHHHHHhh
Q 001411 409 DTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQ 442 (1082)
Q Consensus 409 d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 442 (1082)
|+|++|++|++++.|+|++++++++.|+++++.+
T Consensus 659 d~ii~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 692 (694)
T TIGR01846 659 DRIIVLEKGQIAESGRHEELLALQGLYARLWQQQ 692 (694)
T ss_pred CEEEEEeCCEEEEeCCHHHHHHcCChHHHHHHhh
Confidence 9999999999999999999999999999998654
No 67
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.4e-69 Score=664.22 Aligned_cols=435 Identities=37% Similarity=0.555 Sum_probs=396.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcch
Q 001411 4 GHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGE 83 (1082)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e 83 (1082)
..++..+..+++.++++++++|.+++++++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||.++.+
T Consensus 133 ~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~ 212 (571)
T TIGR02203 133 IVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQ 212 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhccc
Confidence 34556677777788888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 001411 84 AKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAP 163 (1082)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~ 163 (1082)
+.+.++|.+..++..+...+..+..+....+..++..+..++++++|++++.+|.+|+|.+++++.+......|+..+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~ 292 (571)
T TIGR02203 213 AYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTN 292 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888888877777777777888889999999999999999998888777777889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCC
Q 001411 164 NLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSG 243 (1082)
Q Consensus 164 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sG 243 (1082)
.+..+.+++.+.+|+.++++.+++.+.. . ...+...+.|+++||+|+|++.+.++|+|+||++++||+++|+|+||
T Consensus 293 ~~~~~~~~~~~~~ri~~~l~~~~~~~~~--~--~~~~~~~~~i~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sG 368 (571)
T TIGR02203 293 VNAPMQRGLAAAESLFTLLDSPPEKDTG--T--RAIERARGDVEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSG 368 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCC--C--CCCCCCCCeEEEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCC
Confidence 9999999999999999999765432211 1 11112345799999999998655569999999999999999999999
Q ss_pred CcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCC-CCCHHHHHHHHHHhch
Q 001411 244 SGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKE-DASMDRVIEAAKAANA 322 (1082)
Q Consensus 244 sGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~-~~~~~~~~~~~~~~~~ 322 (1082)
||||||+++|+|+++|++|+|.+||+++++++.+++|++|+||||+|++|++|++|||.++.+ +.+++++.++++.+++
T Consensus 369 sGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l 448 (571)
T TIGR02203 369 SGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYA 448 (571)
T ss_pred CCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcCh
Confidence 999999999999999999999999999999999999999999999999999999999999986 6789999999999999
Q ss_pred HHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCc
Q 001411 323 HSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRL 402 (1082)
Q Consensus 323 ~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~ 402 (1082)
++++.++|+|+||.+|++|.+||||||||++||||++++|+|+|||||||+||+++++.+.+.|.+..+++|+|+||||+
T Consensus 449 ~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~ 528 (571)
T TIGR02203 449 QDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRL 528 (571)
T ss_pred HHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHhh
Q 001411 403 STVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQ 442 (1082)
Q Consensus 403 ~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 442 (1082)
+.++.||+|++|++|++++.|+|++++++++.|+++++.+
T Consensus 529 ~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~~~~~~~~~~~ 568 (571)
T TIGR02203 529 STIEKADRIVVMDDGRIVERGTHNELLARNGLYAQLHNMQ 568 (571)
T ss_pred HHHHhCCEEEEEeCCEEEeeCCHHHHHHcCCHHHHHHHHh
Confidence 9999999999999999999999999999888999887644
No 68
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.3e-70 Score=606.39 Aligned_cols=411 Identities=32% Similarity=0.476 Sum_probs=352.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 27 LTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGV 106 (1082)
Q Consensus 27 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 106 (1082)
.+++.+..+..+..+......+..+..++..++.+.+...+-|.|.|.++||.||-|+.+.++|.....++.+...+...
T Consensus 177 ~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~ 256 (591)
T KOG0057|consen 177 FALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSS 256 (591)
T ss_pred HHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHh
Confidence 34444444444444555566677777778888888999999999999999999999999999999999999888887766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 001411 107 AKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKENS 186 (1082)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~ 186 (1082)
..++.+.....+.....+.+.+.|..-+.++.+|.|.+......+.....|+..+...+..+.++..-+.-++...+...
T Consensus 257 sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~ 336 (591)
T KOG0057|consen 257 SLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDE 336 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhh
Confidence 66666555555555556666677777788899999997766555556667888888888888777777766665543221
Q ss_pred CCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEE
Q 001411 187 HSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILL 266 (1082)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~ 266 (1082)
... ....+...+.+.|+|+||+|+|+++ +++|+++||+|++||++||||+|||||||++++|+|+++ ++|+|++
T Consensus 337 ~i~----~~~~~i~~~~~~I~F~dV~f~y~~k-~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~I 410 (591)
T KOG0057|consen 337 DIQ----EAALPIELFGGSIEFDDVHFSYGPK-RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILI 410 (591)
T ss_pred hhh----hccCCcccCCCcEEEEeeEEEeCCC-CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEE
Confidence 111 1011222345679999999999753 349999999999999999999999999999999999999 9999999
Q ss_pred CCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCCh
Q 001411 267 DGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSG 346 (1082)
Q Consensus 267 ~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSg 346 (1082)
||+|+++++++.+|+.|||||||..|||+||.+||.+|++.++++++.++|+.+++||.+.++|+||+|.+||+|..|||
T Consensus 411 dG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSG 490 (591)
T KOG0057|consen 411 DGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSG 490 (591)
T ss_pred CCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecCch
Q 001411 347 GQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHV 426 (1082)
Q Consensus 347 Gqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~ 426 (1082)
||||||+||||+++||+|+++|||||+||.+||+.+.+.+.+...+||+|+|.||+++++.||+|+++++|++.+.|+|+
T Consensus 491 GekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ 570 (591)
T KOG0057|consen 491 GEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHS 570 (591)
T ss_pred chHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred hhhhcCchhHHHHHhhh
Q 001411 427 DLISKGGEYAALVNLQS 443 (1082)
Q Consensus 427 ~l~~~~~~~~~~~~~~~ 443 (1082)
||+++++.|+++|..+.
T Consensus 571 ell~~s~~~~~~w~~~~ 587 (591)
T KOG0057|consen 571 ELLAPSELYADLWTTQT 587 (591)
T ss_pred HHhhhhhHHHHHhcccc
Confidence 99998889999987543
No 69
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.4e-69 Score=660.49 Aligned_cols=431 Identities=29% Similarity=0.427 Sum_probs=372.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 001411 5 HALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEA 84 (1082)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 84 (1082)
.++..+..+++.++++++++|.+++++++++|++++...++.+..++..++.++..++..+.+.|.++|+++||.|+.|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~ 224 (592)
T PRK10790 145 TVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQA 224 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhH
Confidence 44556666777777888899999999888888887777777777777777778888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 001411 85 KAIESYSHSLKEALKQGKKSGVAKGIG-VGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAP 163 (1082)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~ 163 (1082)
.+.+++.+..++..+...+..+..+.. ..+..++..+..+++++++++ +..|.+++|.+++++.+......|+..+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~ 303 (592)
T PRK10790 225 RFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTT 303 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998887777766655554432 223333332222223333344 578999999988877666677788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCC
Q 001411 164 NLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSG 243 (1082)
Q Consensus 164 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sG 243 (1082)
.+..+.++..+++|+.++++.+++.. . .. ..+...+.|+++||+|+|+++ .++|+|+||++++||+++|+|+||
T Consensus 304 ~~~~~~~~~~s~~ri~~~l~~~~~~~-~--~~--~~~~~~~~i~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SG 377 (592)
T PRK10790 304 QQSMLQQAVVAGERVFELMDGPRQQY-G--ND--DRPLQSGRIDIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTG 377 (592)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccC-C--CC--ccCCCCCeEEEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCC
Confidence 99999999999999999997543311 1 11 111223579999999999853 459999999999999999999999
Q ss_pred CcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchH
Q 001411 244 SGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAH 323 (1082)
Q Consensus 244 sGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~ 323 (1082)
||||||+++|+|+|+|++|+|.+||+|+++++++++|++|+||||+|++|++||+|||.++. +.+++++.++|+.++++
T Consensus 378 sGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~ 456 (592)
T PRK10790 378 SGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLA 456 (592)
T ss_pred CCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcH
Confidence 99999999999999999999999999999999999999999999999999999999999997 57889999999999999
Q ss_pred HHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcc
Q 001411 324 SFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLS 403 (1082)
Q Consensus 324 ~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~ 403 (1082)
++++++|+|+||.+||+|.+||||||||++|||||+++|+|+|||||||+||+++++.+.+.|+++.+++|+|+||||++
T Consensus 457 ~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~ 536 (592)
T PRK10790 457 ELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLS 536 (592)
T ss_pred HHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred ccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHhhh
Q 001411 404 TVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQS 443 (1082)
Q Consensus 404 ~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 443 (1082)
.++.||+|++|++|++++.|+|+|++++++.|+++++.+.
T Consensus 537 ~l~~~D~ii~l~~G~i~~~G~~~~L~~~~~~y~~l~~~~~ 576 (592)
T PRK10790 537 TIVEADTILVLHRGQAVEQGTHQQLLAAQGRYWQMYQLQL 576 (592)
T ss_pred HHHhCCEEEEEECCEEEEEcCHHHHHhCCCHHHHHHHHHh
Confidence 9999999999999999999999999999999999997654
No 70
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-69 Score=654.22 Aligned_cols=479 Identities=23% Similarity=0.389 Sum_probs=340.1
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
|+++|++++|+++ ++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ..|+|
T Consensus 2 l~i~~ls~~~~~~--~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----------~~i~~ 68 (530)
T PRK15064 2 LSTANITMQFGAK--PLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----------ERLGK 68 (530)
T ss_pred EEEEEEEEEeCCc--EeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEEEE
Confidence 7899999999743 4999999999999999999999999999999999999999999999873 35999
Q ss_pred EccCCCcChh-cHHHHHhcCCCCC----------------CHH---HHHHH----------HHHhchHHHHhcCCCCccc
Q 001411 286 VSQEPALFAT-SIANNILLGKEDA----------------SMD---RVIEA----------AKAANAHSFVEGLPDGYQT 335 (1082)
Q Consensus 286 v~Q~~~l~~~-ti~~ni~~g~~~~----------------~~~---~~~~~----------~~~~~~~~~i~~lp~g~~t 335 (1082)
++|++.++.. |++||+.++.... ..+ .+.+. -....+.+.++.+ |++.
T Consensus 69 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~ 146 (530)
T PRK15064 69 LRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGV--GIPE 146 (530)
T ss_pred EeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhC--CCCh
Confidence 9999988765 9999998753100 000 00000 0011122334444 4432
Q ss_pred cc-cCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEE
Q 001411 336 QV-GEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMV 413 (1082)
Q Consensus 336 ~~-g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~ 413 (1082)
.. .....+||||||||++|||||+.+|++|||||||++||+.+...+.+.|.+ .++|||+|||+++.+.. ||+|++
T Consensus 147 ~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~--~~~tiiivsHd~~~~~~~~d~i~~ 224 (530)
T PRK15064 147 EQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE--RNSTMIIISHDRHFLNSVCTHMAD 224 (530)
T ss_pred hHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEEE
Confidence 22 234578999999999999999999999999999999999999999999975 47899999999998865 899999
Q ss_pred EeCCEEE-EecCchhhhhcCchh-HHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCC
Q 001411 414 LKNGQVV-ESGTHVDLISKGGEY-AALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQS 491 (1082)
Q Consensus 414 l~~G~i~-~~g~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (1082)
|++|+++ ..|++++.++..... ..... .... ..
T Consensus 225 l~~g~i~~~~g~~~~~~~~~~~~~~~~~~-------------------------------------~~~~-~~------- 259 (530)
T PRK15064 225 LDYGELRVYPGNYDEYMTAATQARERLLA-------------------------------------DNAK-KK------- 259 (530)
T ss_pred EeCCEEEEecCCHHHHHHHHHHHHHHHHH-------------------------------------HHHH-HH-------
Confidence 9999994 778776654310000 00000 0000 00
Q ss_pred CCCchhHHHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHH
Q 001411 492 FAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYL 571 (1082)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 571 (1082)
.
T Consensus 260 ------------------------------------------------------~------------------------- 260 (530)
T PRK15064 260 ------------------------------------------------------A------------------------- 260 (530)
T ss_pred ------------------------------------------------------H-------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 572 LQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAF 651 (1082)
Q Consensus 572 ~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~ 651 (1082)
T Consensus 261 -------------------------------------------------------------------------------- 260 (530)
T PRK15064 261 -------------------------------------------------------------------------------- 260 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHH
Q 001411 652 ILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQA 731 (1082)
Q Consensus 652 ~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~ 731 (1082)
+.++.. ..+. + ..... . ......
T Consensus 261 ---------------------------------~~~~~~----~~~~---------~-~~~~~---~-------~~~~~~ 283 (530)
T PRK15064 261 ---------------------------------QIAELQ----SFVS---------R-FSANA---S-------KAKQAT 283 (530)
T ss_pred ---------------------------------HHHHHH----HHHH---------H-hhccc---h-------hhHHHH
Confidence 000000 0000 0 00000 0 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001411 732 LLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGI 811 (1082)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~ 811 (1082)
....++...
T Consensus 284 -----------------------------------------------------------------------~~~~~~~~~ 292 (530)
T PRK15064 284 -----------------------------------------------------------------------SRAKQIDKI 292 (530)
T ss_pred -----------------------------------------------------------------------HHHHHHhhc
Confidence 000000000
Q ss_pred h-cccccCCCCCCC--Cc-ccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccc
Q 001411 812 L-YRKTAIQPDDPA--SK-EVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFY 887 (1082)
Q Consensus 812 ~-~~~~~~~~~~~~--~~-~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~ 887 (1082)
. ...+........ .. .....+..|+++||+++|+ +.++|+|+||+|++||++||+||||||||||+++|+|++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~ 369 (530)
T PRK15064 293 KLEEVKPSSRQNPFIRFEQDKKLHRNALEVENLTKGFD---NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGEL 369 (530)
T ss_pred cccccCCccccCceeeCCCCCCCCCceEEEEeeEEeeC---CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 0 000000000000 00 0001123699999999996 346999999999999999999999999999999999999
Q ss_pred cCCccEEEECCccCCCCCHHHHhcceEEEcccCc--ccc-ccHHHHhccCC-CCCCHHHHHHHHHHhcHH-HHHhhCccc
Q 001411 888 DPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPA--LFS-TTIYENIKYGN-EDASEIELMKATKAANAH-GFISRMPEG 962 (1082)
Q Consensus 888 ~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~--Lf~-gTIreNl~~~~-~~~~d~ei~~al~~a~l~-~~i~~lp~g 962 (1082)
+|++|+|.++|. ++++|+||++. +++ .|+++|+.... +...++++.++++..++. +.
T Consensus 370 ~p~~G~i~~~~~-----------~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------- 431 (530)
T PRK15064 370 EPDSGTVKWSEN-----------ANIGYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDD------- 431 (530)
T ss_pred CCCCeEEEECCc-----------eEEEEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhH-------
Confidence 999999999983 57999999984 443 59999986432 222344566666666652 22
Q ss_pred ccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEE
Q 001411 963 YQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKI 1041 (1082)
Q Consensus 963 ldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI 1041 (1082)
......+||||||||++||||++++|+||||||||++||+.+.+.+.+.|++. +.|||+|||+++.+.. ||+|
T Consensus 432 ----~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i 505 (530)
T PRK15064 432 ----IKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRI 505 (530)
T ss_pred ----hcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEE
Confidence 22334679999999999999999999999999999999999999999999886 4599999999999876 9999
Q ss_pred EEEeCCEEE-EecChHHHhh
Q 001411 1042 AVLQQGKVA-EIGSHEQLLR 1060 (1082)
Q Consensus 1042 ~Vl~~G~iv-e~G~~~eLl~ 1060 (1082)
++|++|+++ +.|+++++++
T Consensus 506 ~~l~~g~i~~~~g~~~~~~~ 525 (530)
T PRK15064 506 IEITPDGVVDFSGTYEEYLR 525 (530)
T ss_pred EEEECCeEEEcCCCHHHHHH
Confidence 999999998 7899999876
No 71
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=7.5e-69 Score=652.93 Aligned_cols=429 Identities=30% Similarity=0.450 Sum_probs=383.8
Q ss_pred HHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHH
Q 001411 11 SQFFVGFAVG-FTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIES 89 (1082)
Q Consensus 11 ~~~~~~~~~~-~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~ 89 (1082)
..+++.++++ ++++|.+++++++++|+++++...+.++.++..++.++..++..+.+.|.++|+++||+|++|+.+.++
T Consensus 122 ~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~ 201 (569)
T PRK10789 122 VMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSAL 201 (569)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHH
Confidence 3334444444 578999999999999998888888888888888888888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 90 YSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIA 169 (1082)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~ 169 (1082)
|.+..++..+...+..+..+....+...+..+..++++++|++++.+|.+|+|.+++++.+......|+..+...+..+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~ 281 (569)
T PRK10789 202 FAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVE 281 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888888777777666666666666777788999999999999999988887777777788889999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHH
Q 001411 170 KGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTI 249 (1082)
Q Consensus 170 ~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl 249 (1082)
.++.+.+|+.++++.+++.+ . .. ...+...+.|+++|++|+|++.+.++|+|+||+++||++++|+||||||||||
T Consensus 282 ~~~~a~~ri~~ll~~~~~~~-~-~~--~~~~~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL 357 (569)
T PRK10789 282 RGSAAYSRIRAMLAEAPVVK-D-GS--EPVPEGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTGSGKSTL 357 (569)
T ss_pred HHHHHHHHHHHHHcCCCccc-C-CC--CCCCCCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECCCCCCHHHH
Confidence 99999999999997654321 1 11 11122345799999999998654569999999999999999999999999999
Q ss_pred HHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcC
Q 001411 250 ISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGL 329 (1082)
Q Consensus 250 l~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l 329 (1082)
+++|+|+++|++|+|.+||+++.+++..++|++|+||+|+|++|++|++|||.++.++.+++++.++++.+++++++.++
T Consensus 358 l~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~l 437 (569)
T PRK10789 358 LSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRL 437 (569)
T ss_pred HHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999998888899999999999999999999
Q ss_pred CCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCC
Q 001411 330 PDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVD 409 (1082)
Q Consensus 330 p~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d 409 (1082)
|+|++|.+|++|.+||||||||++||||++++|+|+|||||||+||+++++.+.+.|+++.+++|+|+||||++.++.||
T Consensus 438 p~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d 517 (569)
T PRK10789 438 PQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEAS 517 (569)
T ss_pred cCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred EEEEEeCCEEEEecCchhhhhcCchhHHHHHhhh
Q 001411 410 TIMVLKNGQVVESGTHVDLISKGGEYAALVNLQS 443 (1082)
Q Consensus 410 ~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 443 (1082)
+|++|++|++++.|+|++++++++.|++++..+.
T Consensus 518 ~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~~ 551 (569)
T PRK10789 518 EILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQQ 551 (569)
T ss_pred EEEEEeCCEEEEecCHHHHHHcCChHHHHHHHhh
Confidence 9999999999999999999999999999987654
No 72
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=8.1e-69 Score=657.06 Aligned_cols=430 Identities=32% Similarity=0.501 Sum_probs=384.1
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHH
Q 001411 10 LSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIES 89 (1082)
Q Consensus 10 ~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~ 89 (1082)
+..+++.++++++++|.+++++++++|+..++...+.++.++..++.++..++..+.+.|.++|+++||.|+.++.+.++
T Consensus 141 ~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~ 220 (588)
T PRK13657 141 LVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQA 220 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHH
Confidence 34444556666889999999998888888888888888888888888888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 90 YSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIA 169 (1082)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~ 169 (1082)
+.+..++..+...+..........+..++..+..++++++|++++.+|.+|+|.+++++.+......|+..+...+..+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~ 300 (588)
T PRK13657 221 LRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVF 300 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888877777777766766777777778888999999999999999988877666666778888999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHH
Q 001411 170 KGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTI 249 (1082)
Q Consensus 170 ~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl 249 (1082)
.+..+++|+.++++.+++.+.. ......+...+.|+++||+|+||++ +++|+|+||+++|||+++|+|+||||||||
T Consensus 301 ~~~~~~~~i~~l~~~~~~~~~~--~~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTL 377 (588)
T PRK13657 301 MAAPKLEEFFEVEDAVPDVRDP--PGAIDLGRVKGAVEFDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTL 377 (588)
T ss_pred HHHHHHHHHHHHhCCCcccCCC--CCCCCcCCCCCeEEEEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHH
Confidence 9999999999998754332111 1111111223579999999999853 359999999999999999999999999999
Q ss_pred HHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcC
Q 001411 250 ISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGL 329 (1082)
Q Consensus 250 l~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l 329 (1082)
+++|+|+|+|++|+|.+||+++++++.+++|++|+||||+|++|++||+|||++++|+.++++++++++.+++++++.++
T Consensus 378 l~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~l 457 (588)
T PRK13657 378 INLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERK 457 (588)
T ss_pred HHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999998888899999999999999999999
Q ss_pred CCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCC
Q 001411 330 PDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVD 409 (1082)
Q Consensus 330 p~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d 409 (1082)
|+|+||.+|++|.+||||||||++|||||+++|+|+|||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||
T Consensus 458 p~gldt~i~~~g~~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D 537 (588)
T PRK13657 458 PDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNAD 537 (588)
T ss_pred cccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999998878899999999999999999
Q ss_pred EEEEEeCCEEEEecCchhhhhcCchhHHHHHhh
Q 001411 410 TIMVLKNGQVVESGTHVDLISKGGEYAALVNLQ 442 (1082)
Q Consensus 410 ~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 442 (1082)
+|++|++|++++.|+|++++++++.|++++..+
T Consensus 538 ~ii~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 570 (588)
T PRK13657 538 RILVFDNGRVVESGSFDELVARGGRFAALLRAQ 570 (588)
T ss_pred EEEEEECCEEEEeCCHHHHHHCCChHHHHHHHh
Confidence 999999999999999999999999999998754
No 73
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3.7e-69 Score=703.62 Aligned_cols=213 Identities=27% Similarity=0.431 Sum_probs=181.7
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc---CCccEEEECCccCCCCCHHHH
Q 001411 834 NIELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD---PISGTVLIDGYDIRTLNLRSL 909 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~l 909 (1082)
.++++||+++|+.++ ++++|+|||++|+|||++||+||||||||||+++|.|..+ |++|+|.+||+++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 379999999996322 3579999999999999999999999999999999999998 78899999999985 257
Q ss_pred hcceEEEcccCc-cccccHHHHhccCC----C-CCCHHH----HHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 910 RRKIGLVQQEPA-LFSTTIYENIKYGN----E-DASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 910 R~~i~~VpQdp~-Lf~gTIreNl~~~~----~-~~~d~e----i~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
|++++||||++. ++..|+||||.++. + ..++++ +.++++..++. +..|+.+|+.|.+||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~-------~~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEME-------SYADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCh-------hhCCCeeCCCCCCCCHHHh
Confidence 899999999876 45679999998642 1 233333 34455555543 3468999988889999999
Q ss_pred HHHHHHHHHccCCC-EEEeeCCCCCCCHHHHHHHHHHHHHh-cCCceEEEEecCchhh--hccCEEEEEeCC-EEEEecC
Q 001411 980 QRVAIARAILKNPS-ILLLDEATSALDTASENLIQEALDKL-MEGRTTIMVAHRLSTI--RNADKIAVLQQG-KVAEIGS 1054 (1082)
Q Consensus 980 QrlaLARAlL~~~~-ILlLDEaTS~LD~~te~~I~~~l~~~-~~~~TvI~IaHrl~ti--~~~DrI~Vl~~G-~ive~G~ 1054 (1082)
||++|||||+.+|+ ||+||||||+||+.+...|++.|++. .+|+|||+++|+++.. ..+|+|++|++| +++++|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 99999999999999999999999987 4689999999999974 569999999997 9999999
Q ss_pred hHH
Q 001411 1055 HEQ 1057 (1082)
Q Consensus 1055 ~~e 1057 (1082)
+.+
T Consensus 988 ~~~ 990 (1394)
T TIGR00956 988 LGE 990 (1394)
T ss_pred ccc
Confidence 743
No 74
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-68 Score=593.21 Aligned_cols=414 Identities=26% Similarity=0.399 Sum_probs=354.0
Q ss_pred HHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHH
Q 001411 22 TSVWQLTLLTLA-VVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQ 100 (1082)
Q Consensus 22 ~~~~~l~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~ 100 (1082)
+++|.+++.... ++.+++++..++.+.-++..++.....+...+.+.|.++|....+.||.++.+.+.+.+....+.+.
T Consensus 155 f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~ 234 (573)
T COG4987 155 FFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKA 234 (573)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 466777664443 4444445666777777777777777888889999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 001411 101 GKKSGVAKGIGVGLTYGLLFCAWA-LLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAA-PNLAAIAKGKAAAANI 178 (1082)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~a~~ri 178 (1082)
..|..++..+...+..++..+..+ +++|.+ ..+-.|..+...+...++.++....++..+. ..+..+.+...|++|+
T Consensus 235 q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a-~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl 313 (573)
T COG4987 235 QRKQARFTGLSDAILLLIAGLLVIGLLLWMA-AQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRL 313 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHH
Confidence 999989888888877777666555 444444 3444566653333333333233334444444 5678889999999999
Q ss_pred HHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC
Q 001411 179 ISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE 258 (1082)
Q Consensus 179 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~ 258 (1082)
.++++.+++...+ . + ..+.....++++||||+||+++.++|+|+||++++||++||+|+||||||||+++|.|-|+
T Consensus 314 ~~i~~q~~e~~~~-~-~--~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~ 389 (573)
T COG4987 314 NDILDQKPEVTFP-D-E--QTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD 389 (573)
T ss_pred hhhccCCcccCCC-c-c--ccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC
Confidence 9999876654422 1 1 1111122799999999999887789999999999999999999999999999999999999
Q ss_pred CCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCcccccc
Q 001411 259 PTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVG 338 (1082)
Q Consensus 259 ~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g 338 (1082)
|++|+|.++|.++..++++.+|+.|++++|.+++|++|+|||+.+++|++++|+++++++.+++++.+++.|+|++|.+|
T Consensus 390 ~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lg 469 (573)
T COG4987 390 PQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLG 469 (573)
T ss_pred CCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCE
Q 001411 339 EGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQ 418 (1082)
Q Consensus 339 ~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~ 418 (1082)
|.|..||||||||++|||+|++|++++||||||.+||+.||+++++.+.+..++||+|+||||+..++.||+|+||++|+
T Consensus 470 e~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~Gk 549 (573)
T COG4987 470 EGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGK 549 (573)
T ss_pred cCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEECCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCchhhhhcCchhHHHHH
Q 001411 419 VVESGTHVDLISKGGEYAALVN 440 (1082)
Q Consensus 419 i~~~g~~~~l~~~~~~~~~~~~ 440 (1082)
++++|+|.+|++++|.|.++++
T Consensus 550 iie~G~~~~Ll~~~g~~~~l~q 571 (573)
T COG4987 550 IIEEGTHAELLANNGRYKRLYQ 571 (573)
T ss_pred eeecCCHHhhhccccHHHHHhc
Confidence 9999999999999999998864
No 75
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=5.3e-68 Score=650.38 Aligned_cols=436 Identities=39% Similarity=0.611 Sum_probs=385.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHH
Q 001411 6 ALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAK 85 (1082)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 85 (1082)
++..+..+++.++++++++|.+++++++.+|++++...++.+..++..++.++..++..+.+.|.++|+++||.++.|+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~ 218 (576)
T TIGR02204 139 ALRNALMCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDA 218 (576)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHH
Confidence 34455566666777888999999998888888888888889999998999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 86 AIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNL 165 (1082)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~ 165 (1082)
+.++|.+..++..+...+..........+..++.++..++++++|++++.+|.+|+|.++++..+......|+..++..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~ 298 (576)
T TIGR02204 219 ERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVW 298 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888887777776666666555555555666777889999999999999998777766666778899999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCC-CccccceeEEEeCCCEEEEEcCCCC
Q 001411 166 AAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGPSGS 244 (1082)
Q Consensus 166 ~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~-~~~l~~i~l~i~~g~~~~ivG~sGs 244 (1082)
..+.+++.+++|+.++++.+++.+...... ....+..+.|+++||+|+||+++ +++|+|+||+++|||+++|+|+|||
T Consensus 299 ~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~-~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGs 377 (576)
T TIGR02204 299 GELQRAAGAAERLIELLQAEPDIKAPAHPK-TLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGA 377 (576)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcCCCCCCCc-cCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCC
Confidence 999999999999999997544322111010 01111235699999999998543 4699999999999999999999999
Q ss_pred cHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHH
Q 001411 245 GKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHS 324 (1082)
Q Consensus 245 GKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~ 324 (1082)
|||||+++|+|+++|++|+|.+||.++++++.+++|++|+||||+|++|++||+|||.++.|+.++++++++++.+++.+
T Consensus 378 GKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~ 457 (576)
T TIGR02204 378 GKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHE 457 (576)
T ss_pred CHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888999999999999999
Q ss_pred HHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccc
Q 001411 325 FVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLST 404 (1082)
Q Consensus 325 ~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~ 404 (1082)
+++++|+|++|.+|++|.+||||||||++||||++++|+++|||||||+||+++++.+.+.++++.+++|+|+||||++.
T Consensus 458 ~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~ 537 (576)
T TIGR02204 458 FISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLAT 537 (576)
T ss_pred HHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998888999999999999
Q ss_pred cccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHhh
Q 001411 405 VRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQ 442 (1082)
Q Consensus 405 ~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 442 (1082)
++.+|+|++|++|++++.|+|++++++++.|+++++.+
T Consensus 538 ~~~~d~vi~l~~g~~~~~g~~~~l~~~~~~~~~l~~~~ 575 (576)
T TIGR02204 538 VLKADRIVVMDQGRIVAQGTHAELIAKGGLYARLARLQ 575 (576)
T ss_pred HHhCCEEEEEECCEEEeeecHHHHHHcCChHHHHHhhc
Confidence 99999999999999999999999999999999987643
No 76
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=2.1e-68 Score=646.29 Aligned_cols=396 Identities=25% Similarity=0.346 Sum_probs=346.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcch
Q 001411 5 HALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYT-ITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGE 83 (1082)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e 83 (1082)
.++..+..+++.++++++++|.+++++++.+|++.++...+. +..++..++.++..++..+.+.|.++|+++||+|++|
T Consensus 133 ~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~ 212 (529)
T TIGR02868 133 PLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGAL 212 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCCh
Confidence 445556666777788899999999998888787766554444 4445556677778889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 001411 84 AKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAP 163 (1082)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~ 163 (1082)
+.+.++|++..++..+...+..+..+....+..++..+..++++++|++++.+|.+|+|.+.+++.+......|+..+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~ 292 (529)
T TIGR02868 213 DPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPA 292 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888888777777777777778888999999999999999888777666666778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCC
Q 001411 164 NLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSG 243 (1082)
Q Consensus 164 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sG 243 (1082)
.+..+.++..+.+|+.++++.+++.++.........+...+.|+++||+|+|++++ ++|+|+||+++|||+++||||||
T Consensus 293 ~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~~-~vL~~isl~i~~G~~vaIvG~SG 371 (529)
T TIGR02868 293 AAQALTRVRAAAERIEEVTGAKGPRPEGVVPAAGALGLGKPTLELRDLSFGYPGSP-PVLDGVSLDLPPGERVAILGPSG 371 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCcccCCCCceEEEEEEEEecCCCC-ceeecceEEEcCCCEEEEECCCC
Confidence 89999999999999999997654322111110111111235699999999998643 59999999999999999999999
Q ss_pred CcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchH
Q 001411 244 SGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAH 323 (1082)
Q Consensus 244 sGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~ 323 (1082)
||||||+++|+|+|+|++|+|.+||+|++++ .+++|++|+||||+|++|++||+|||.+|.|+.++++++++|+.++++
T Consensus 372 sGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~ 450 (529)
T TIGR02868 372 SGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLA 450 (529)
T ss_pred CCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCH
Confidence 9999999999999999999999999999999 999999999999999999999999999999988999999999999999
Q ss_pred HHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCc
Q 001411 324 SFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRL 402 (1082)
Q Consensus 324 ~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~ 402 (1082)
+++.++|+|+||.+||+|.+||||||||++||||++++|+|+|||||||+||+++|+.+++.+.++.+++|+|+||||+
T Consensus 451 ~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 451 DWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999988899999999995
No 77
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.9e-67 Score=641.24 Aligned_cols=433 Identities=32% Similarity=0.477 Sum_probs=384.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHH
Q 001411 7 LRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKA 86 (1082)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~ 86 (1082)
+..+..+++.++++++++|.+++++++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.++.+
T Consensus 138 ~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~ 217 (585)
T TIGR01192 138 LATFVALFLLIPTAFAMDWRLSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAE 217 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHH
Confidence 33444455555677899999999999999998888888888888888888888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 87 IESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLA 166 (1082)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~ 166 (1082)
.+++.+..++..+...+..+..+....+..++..+..++++++|++++.+|.+++|.+++++.+......|+..+...+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~ 297 (585)
T TIGR01192 218 TSALKQFTNNLLSAQYPVLDWWALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFIT 297 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888887777777766666666666677777888999999999999999988877666666778888999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcH
Q 001411 167 AIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGK 246 (1082)
Q Consensus 167 ~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGK 246 (1082)
.+..++.+.+|+.++++.+++.++. ......+...+.++++||+|+|+++ +++|+|+||++++||+++|+|||||||
T Consensus 298 ~~~~~~~~~~ri~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGK 374 (585)
T TIGR01192 298 QIFEARAKLEDFFDLEDSVFQREEP--ADAPELPNVKGAVEFRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGK 374 (585)
T ss_pred HHHHHHHHHHHHHHHHcCCccccCC--ccCCCCCCCCCeEEEEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCH
Confidence 9999999999999998754332111 1101112234569999999999853 358999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHH
Q 001411 247 STIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFV 326 (1082)
Q Consensus 247 STll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i 326 (1082)
|||+++|+|+++|++|+|.+||.++++++.+++|+.++||+|+|++|++|++|||.++.++.++++++++++.+++++++
T Consensus 375 STL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i 454 (585)
T TIGR01192 375 TTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFI 454 (585)
T ss_pred HHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888899999999999999999
Q ss_pred hcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc
Q 001411 327 EGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR 406 (1082)
Q Consensus 327 ~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~ 406 (1082)
.++|+|++|.+|++|.+||||||||++|||||+++|+++|||||||+||+++++.+.+.|.++.+++|+|+||||++.++
T Consensus 455 ~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~ 534 (585)
T TIGR01192 455 LKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVR 534 (585)
T ss_pred HhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888999999999999999
Q ss_pred cCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHhh
Q 001411 407 DVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQ 442 (1082)
Q Consensus 407 ~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 442 (1082)
.||+|++|++|++++.|+|++++++++.|++++..+
T Consensus 535 ~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 570 (585)
T TIGR01192 535 NADLVLFLDQGRLIEKGSFQELIQKDGRFYKLLRRS 570 (585)
T ss_pred cCCEEEEEECCEEEEECCHHHHHHCCChHHHHHHhC
Confidence 999999999999999999999999999999998755
No 78
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.1e-69 Score=576.87 Aligned_cols=421 Identities=33% Similarity=0.498 Sum_probs=374.5
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHH
Q 001411 18 AVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEA 97 (1082)
Q Consensus 18 ~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~ 97 (1082)
++...++|+.+++.++.+.++.++......+.....++..++.+++++...++|-+.+++|.||.|+.+..+|.+.++.+
T Consensus 76 i~~~~~~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y 155 (497)
T COG5265 76 ILWRVYGWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETY 155 (497)
T ss_pred HHHhhcccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHH
Confidence 34456789999988888888887777777776677777788888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 98 LKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAAN 177 (1082)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~r 177 (1082)
.+...|.....++.......+.......+...++..+..|++|+|++...-..+...+.|+..+......+.+++.-.++
T Consensus 156 ~~a~~k~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~ 235 (497)
T COG5265 156 EKAAIKVHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEK 235 (497)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHH
Confidence 98888876655555555555555555666777888899999999997776666677778888888899999999999999
Q ss_pred HHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCC
Q 001411 178 IISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLY 257 (1082)
Q Consensus 178 i~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~ 257 (1082)
++++++.+.+..+.+..... .+...+.+.|+||+|.|..+ +++|+++||++++|+++++|||||+||||++++|.++|
T Consensus 236 mfdLl~~~~~v~d~pda~~L-~~~~~g~v~F~~V~F~y~~~-r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFy 313 (497)
T COG5265 236 MFDLLDVEAEVSDAPDAPPL-WPVRLGAVAFINVSFAYDPR-RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFY 313 (497)
T ss_pred HHHhhccchhhccCCCCccc-cccccceEEEEEEEeecccc-chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHh
Confidence 99999776554322111111 11335679999999999654 46999999999999999999999999999999999999
Q ss_pred CCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccc
Q 001411 258 EPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQV 337 (1082)
Q Consensus 258 ~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~ 337 (1082)
++++|.|.+||+|+++...+.+|+.||.||||..|||+|+..||.+|+|.++++++..+++.++++++|+.+|+||+|.|
T Consensus 314 D~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~V 393 (497)
T COG5265 314 DVNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGV 393 (497)
T ss_pred CCcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCC
Q 001411 338 GEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNG 417 (1082)
Q Consensus 338 g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G 417 (1082)
||+|-.|||||||||||||+++++|+||+|||+||+||.+||+.++..|++..+++|.++|+||++++-.||+|+||++|
T Consensus 394 gerglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g 473 (497)
T COG5265 394 GERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNG 473 (497)
T ss_pred chheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCchhhhhcCchhHHHHH
Q 001411 418 QVVESGTHVDLISKGGEYAALVN 440 (1082)
Q Consensus 418 ~i~~~g~~~~l~~~~~~~~~~~~ 440 (1082)
+|+|.|+|++|++.+|.|++||.
T Consensus 474 ~i~erg~h~~ll~~~g~ya~mw~ 496 (497)
T COG5265 474 RIVERGTHEELLAAGGLYAEMWR 496 (497)
T ss_pred EEEecCcHHHHHHcCChHHHHhc
Confidence 99999999999999999999984
No 79
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6.3e-68 Score=641.75 Aligned_cols=482 Identities=22% Similarity=0.330 Sum_probs=335.0
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.|+++|++++|++ ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..||
T Consensus 6 ~l~i~~l~~~y~~-~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~-----------~~i~ 73 (556)
T PRK11819 6 IYTMNRVSKVVPP-KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPG-----------IKVG 73 (556)
T ss_pred EEEEeeEEEEeCC-CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEEE
Confidence 4899999999972 135999999999999999999999999999999999999999999999752 4699
Q ss_pred EEccCCCcChh-cHHHHHhcCCCC----------------CC----------HHHHHHHHHH-------hchHHHHhcCC
Q 001411 285 LVSQEPALFAT-SIANNILLGKED----------------AS----------MDRVIEAAKA-------ANAHSFVEGLP 330 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~----------------~~----------~~~~~~~~~~-------~~~~~~i~~lp 330 (1082)
||+|+|.+++. |++||+.++... .. ..++.+.+.. ..+.+.++.+
T Consensus 74 ~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 152 (556)
T PRK11819 74 YLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL- 152 (556)
T ss_pred EEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC-
Confidence 99999999876 999999875310 00 0011111111 1122233333
Q ss_pred CCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CC
Q 001411 331 DGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VD 409 (1082)
Q Consensus 331 ~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d 409 (1082)
|++ .......+|||||||||+|||||+.+|++||||||||+||+.+..++.+.|+++. .|+|+|||+++.+.. ||
T Consensus 153 -gl~-~~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~--~tviiisHd~~~~~~~~d 228 (556)
T PRK11819 153 -RCP-PWDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYP--GTVVAVTHDRYFLDNVAG 228 (556)
T ss_pred -CCC-cccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCC--CeEEEEeCCHHHHHhhcC
Confidence 332 2345567899999999999999999999999999999999999999999998863 599999999999875 89
Q ss_pred EEEEEeCCEEE-EecCchhhhhcCchhHHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccC
Q 001411 410 TIMVLKNGQVV-ESGTHVDLISKGGEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSS 488 (1082)
Q Consensus 410 ~i~~l~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (1082)
+|++|++|+++ ..|++++..+....- . .. .. ...+
T Consensus 229 ~i~~l~~g~i~~~~g~~~~~~~~~~~~--~-~~------------------------------------~~---~~~~-- 264 (556)
T PRK11819 229 WILELDRGRGIPWEGNYSSWLEQKAKR--L-AQ------------------------------------EE---KQEA-- 264 (556)
T ss_pred eEEEEeCCEEEEecCCHHHHHHHHHHH--H-HH------------------------------------HH---HHHH--
Confidence 99999999986 667666543211000 0 00 00 0000
Q ss_pred CCCCCCchhHHHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHH
Q 001411 489 DQSFAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIP 568 (1082)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 568 (1082)
...
T Consensus 265 ----------------------------------------------------------~~~------------------- 267 (556)
T PRK11819 265 ----------------------------------------------------------ARQ------------------- 267 (556)
T ss_pred ----------------------------------------------------------HHH-------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 569 VYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFV 648 (1082)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~ 648 (1082)
..++ ++.. |.+. .+.+
T Consensus 268 -----------------~~~~-~~~~--------~~~~--~~~~------------------------------------ 283 (556)
T PRK11819 268 -----------------KALK-RELE--------WVRQ--SPKA------------------------------------ 283 (556)
T ss_pred -----------------HHHH-HHHH--------HHHH--hhhh------------------------------------
Confidence 0000 0000 0000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHH
Q 001411 649 IAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPN 728 (1082)
Q Consensus 649 ~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~ 728 (1082)
+ . . ...
T Consensus 284 -----------------------------------------------------------~-----------~--~--~~~ 289 (556)
T PRK11819 284 -----------------------------------------------------------R-----------Q--A--KSK 289 (556)
T ss_pred -----------------------------------------------------------h-----------H--H--HHH
Confidence 0 0 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 729 KQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPV 808 (1082)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri 808 (1082)
+ .....++.
T Consensus 290 ~-----------------------------------------------------------------------~~~~~~~~ 298 (556)
T PRK11819 290 A-----------------------------------------------------------------------RLARYEEL 298 (556)
T ss_pred H-----------------------------------------------------------------------HHHHHHHh
Confidence 0 00000000
Q ss_pred HHhhcccccCCC-CCCC-CcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcc
Q 001411 809 FGILYRKTAIQP-DDPA-SKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRF 886 (1082)
Q Consensus 809 ~~~~~~~~~~~~-~~~~-~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl 886 (1082)
.+. .+.+.+. .... .......+..|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+
T Consensus 299 ~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~ 373 (556)
T PRK11819 299 LSE--EYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFG---DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQ 373 (556)
T ss_pred hcc--cccccCCCceeecCCCCCCCCeEEEEEeEEEEEC---CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 000 0000000 0000 000001123599999999996 34699999999999999999999999999999999999
Q ss_pred ccCCccEEEECCccCCCCCHHHHhcceEEEcccC-cccc-ccHHHHhccCCCC----CCHHHHHHHHHHhcHHHHHhhCc
Q 001411 887 YDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEP-ALFS-TTIYENIKYGNED----ASEIELMKATKAANAHGFISRMP 960 (1082)
Q Consensus 887 ~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp-~Lf~-gTIreNl~~~~~~----~~d~ei~~al~~a~l~~~i~~lp 960 (1082)
++|++|+|.+++ ++ +|+|+||++ .++. -|+++|+.++... ..+.+..++++..++.+
T Consensus 374 ~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~------ 436 (556)
T PRK11819 374 EQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKG------ 436 (556)
T ss_pred CCCCCeEEEECC-ce----------EEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCCh------
Confidence 999999999954 21 599999997 5654 5999999864321 11223333444443321
Q ss_pred ccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cC
Q 001411 961 EGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-AD 1039 (1082)
Q Consensus 961 ~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D 1039 (1082)
.........||||||||++||||++.+|++|||||||++||+.+.+.+.+.|++. + .|+|+|||+++.+.. ||
T Consensus 437 ----~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d 510 (556)
T PRK11819 437 ----GDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIAT 510 (556)
T ss_pred ----hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCC
Confidence 0122334579999999999999999999999999999999999999999999986 3 499999999999865 99
Q ss_pred EEEEEeC-CEEEE-ecChHHHhhh
Q 001411 1040 KIAVLQQ-GKVAE-IGSHEQLLRK 1061 (1082)
Q Consensus 1040 rI~Vl~~-G~ive-~G~~~eLl~~ 1061 (1082)
+|++|++ |++.+ .|++++++++
T Consensus 511 ~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 511 HILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred EEEEEECCCeEEEecCCHHHHHHH
Confidence 9999996 88874 6888888764
No 80
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=6e-66 Score=680.87 Aligned_cols=472 Identities=18% Similarity=0.282 Sum_probs=381.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 578 TLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRL 657 (1082)
Q Consensus 578 ~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 657 (1082)
.+.+.++...++..+|+++++.+..+|+. .++|+++|++++|++.+++.+ ..+..+....+.+++++++++ +.+
T Consensus 366 ~~~~~~ir~~l~~~i~~k~l~l~~~~~~~--~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~---~~l 439 (1495)
T PLN03232 366 GRVGFRLRSTLVAAIFHKSLRLTHEARKN--FASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLY---QQL 439 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCC--CCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 56778888888889999999999998864 789999999999999999976 344444444444433333222 223
Q ss_pred HHHHHHHHHHHH---HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHH
Q 001411 658 AAVVAASLPLLI---GAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLR 734 (1082)
Q Consensus 658 ~~~~l~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (1082)
++..++.+++++ .+..+..+..++..++..+...+..+.+.|.++|+++||+|++|+.+.+++.+..++..+...+.
T Consensus 440 g~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~ 519 (1495)
T PLN03232 440 GVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKA 519 (1495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 332222222211 12233445555566666677777889999999999999999999999999998877777666665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 001411 735 GHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYR 814 (1082)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~ 814 (1082)
....++...+..... ..+...+++.+++..+.++.+.+++++........++..+...+..+..+..+.+|+.++++.
T Consensus 520 ~~~~~~~~~~~~~~~--~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~ 597 (1495)
T PLN03232 520 QLLSAFNSFILNSIP--VVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLS 597 (1495)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 555444333222211 123346778888888899999999988888888888888888889999999999999999876
Q ss_pred cccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEE
Q 001411 815 KTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTV 894 (1082)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I 894 (1082)
+++.....+ +..+..+.|+|+||+|+|+.+++.++|+|+||+|++||+++|||+||||||||+++|+|+++|++|.+
T Consensus 598 ~~~~~~~~~---~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i 674 (1495)
T PLN03232 598 EERILAQNP---PLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSS 674 (1495)
T ss_pred ccccccccC---CcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCE
Confidence 543211111 11122357999999999985445689999999999999999999999999999999999999999876
Q ss_pred EECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCC
Q 001411 895 LIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQL 974 (1082)
Q Consensus 895 ~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~L 974 (1082)
. .+|++|+||||+|.||+|||||||.+|.+ .++++++++++.++++++++.+|+|+||.|||+|.+|
T Consensus 675 ~------------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~L 741 (1495)
T PLN03232 675 V------------VIRGSVAYVPQVSWIFNATVRENILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNI 741 (1495)
T ss_pred E------------EecCcEEEEcCccccccccHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCccc
Confidence 3 46889999999999999999999999874 7899999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHH-HHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEec
Q 001411 975 SGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQE-ALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 975 SgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~-~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G 1053 (1082)
|||||||||||||++++|+|+|||||||+||++|++.|.+ .++...+++|+|+||||++++..||+|++|++|+|+|+|
T Consensus 742 SGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~G 821 (1495)
T PLN03232 742 SGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEG 821 (1495)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEec
Confidence 9999999999999999999999999999999999998855 466666899999999999999999999999999999999
Q ss_pred ChHHHhhhccchHHHHHHHhh
Q 001411 1054 SHEQLLRKENGIYKQLIRLQQ 1074 (1082)
Q Consensus 1054 ~~~eLl~~~~g~f~~l~~~~~ 1074 (1082)
+|+||++ +++.|+++++.+.
T Consensus 822 t~~eL~~-~~~~~~~l~~~~~ 841 (1495)
T PLN03232 822 TFAELSK-SGSLFKKLMENAG 841 (1495)
T ss_pred CHHHHHh-cchhHHHHHHhcc
Confidence 9999997 6789999987654
No 81
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.5e-67 Score=634.48 Aligned_cols=410 Identities=26% Similarity=0.393 Sum_probs=368.1
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHH
Q 001411 16 GFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLK 95 (1082)
Q Consensus 16 ~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~ 95 (1082)
.++++++++|.+++++++.+|+++++..++.+..++..++.++..++..+.+.|.++|+++||.|++|+.+.++|.+..+
T Consensus 132 ~~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~ 211 (544)
T TIGR01842 132 YLLVCFLLHPWIGILALGGAVVLVGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHS 211 (544)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHH
Confidence 34567889999999888888887777777778888888888888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 96 EALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAA 175 (1082)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~ 175 (1082)
+..+...+.....+....+..++..+..++++++|++++.+|.+|+|.+++++.+......|+..+...+..+.+++.+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~ 291 (544)
T TIGR01842 212 KYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAY 291 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877777777766666666666777788999999999999999998887777777789999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHh
Q 001411 176 ANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQR 255 (1082)
Q Consensus 176 ~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g 255 (1082)
+|+.++++.+++.+ . . ...+...+.++++|++|+|++.++++|+|+||+++|||+++|+||||||||||+++|+|
T Consensus 292 ~ri~~~l~~~~~~~-~--~--~~~~~~~~~i~~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g 366 (544)
T TIGR01842 292 KRLNELLANYPSRD-P--A--MPLPEPEGHLSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVG 366 (544)
T ss_pred HHHHHHHhCCcccc-C--C--CCCCCCCCeEEEEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 99999997654322 1 1 11122335799999999998654569999999999999999999999999999999999
Q ss_pred CCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccc
Q 001411 256 LYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQT 335 (1082)
Q Consensus 256 ~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t 335 (1082)
+++|++|+|.+||+++.+++.+++|+.++||||+|++|++|++|||.++.++.++++++++|+.++++++++++|+|++|
T Consensus 367 ~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t 446 (544)
T TIGR01842 367 IWPPTSGSVRLDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDT 446 (544)
T ss_pred CCCCCCceEEECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccc
Confidence 99999999999999999999999999999999999999999999999887777889999999999999999999999999
Q ss_pred cccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCccccccCCEEEEE
Q 001411 336 QVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRDVDTIMVL 414 (1082)
Q Consensus 336 ~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~~d~i~~l 414 (1082)
.+|++|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+.++. +++|+|+||||++.++.||+|++|
T Consensus 447 ~~~~~g~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l 526 (544)
T TIGR01842 447 VIGPGGATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVL 526 (544)
T ss_pred ccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999999999999885 579999999999999999999999
Q ss_pred eCCEEEEecCchhhhh
Q 001411 415 KNGQVVESGTHVDLIS 430 (1082)
Q Consensus 415 ~~G~i~~~g~~~~l~~ 430 (1082)
++|++++.|+|+++++
T Consensus 527 ~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 527 QDGRIARFGERDEVLA 542 (544)
T ss_pred ECCEEEeeCCHHHHhh
Confidence 9999999999999865
No 82
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=2.3e-67 Score=636.95 Aligned_cols=480 Identities=24% Similarity=0.336 Sum_probs=334.7
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
-++++|++++|++. .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +..||
T Consensus 4 ~i~~~nls~~~~~~-~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i~ 71 (552)
T TIGR03719 4 IYTMNRVSKVVPPK-KEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----------GIKVG 71 (552)
T ss_pred EEEEeeEEEecCCC-CeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEEE
Confidence 48999999999722 3599999999999999999999999999999999999999999999975 24699
Q ss_pred EEccCCCcChh-cHHHHHhcCCCC------------------CC--------HHHHHHHHHHhch-------HHHHhcCC
Q 001411 285 LVSQEPALFAT-SIANNILLGKED------------------AS--------MDRVIEAAKAANA-------HSFVEGLP 330 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~------------------~~--------~~~~~~~~~~~~~-------~~~i~~lp 330 (1082)
||+|+|++++. |++||+.++... .. ..++.++++.++. .+.++.+
T Consensus 72 ~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 150 (552)
T TIGR03719 72 YLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL- 150 (552)
T ss_pred EEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC-
Confidence 99999998865 999999875310 00 1122233322222 2223333
Q ss_pred CCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CC
Q 001411 331 DGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VD 409 (1082)
Q Consensus 331 ~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d 409 (1082)
|++ .......+||||||||++|||||+.+|++|||||||++||+.+...+.+.|.++ ++|+|+|||+++.+.. ||
T Consensus 151 -~l~-~~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~~~~~~d 226 (552)
T TIGR03719 151 -RCP-PWDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYFLDNVAG 226 (552)
T ss_pred -CCC-cccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcC
Confidence 332 134566789999999999999999999999999999999999999999999876 3699999999999876 89
Q ss_pred EEEEEeCCEEE-EecCchhhhhcCchhHHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccC
Q 001411 410 TIMVLKNGQVV-ESGTHVDLISKGGEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSS 488 (1082)
Q Consensus 410 ~i~~l~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (1082)
+|++|++|+++ ..|++++..+.... .... .. .+
T Consensus 227 ~v~~l~~g~i~~~~g~~~~~~~~~~~---~~~~------------------------------------~~---~~---- 260 (552)
T TIGR03719 227 WILELDRGRGIPWEGNYSSWLEQKEK---RLEQ------------------------------------EE---KE---- 260 (552)
T ss_pred eEEEEECCEEEEecCCHHHHHHHHHH---HHHH------------------------------------HH---HH----
Confidence 99999999976 66766655321000 0000 00 00
Q ss_pred CCCCCCchhHHHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHH
Q 001411 489 DQSFAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIP 568 (1082)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 568 (1082)
+ ..
T Consensus 261 -------------~-------------------------------------------~~--------------------- 263 (552)
T TIGR03719 261 -------------E-------------------------------------------SA--------------------- 263 (552)
T ss_pred -------------H-------------------------------------------HH---------------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 569 VYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFV 648 (1082)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~ 648 (1082)
...
T Consensus 264 -------------------~~~---------------------------------------------------------- 266 (552)
T TIGR03719 264 -------------------RQK---------------------------------------------------------- 266 (552)
T ss_pred -------------------HHH----------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHH
Q 001411 649 IAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPN 728 (1082)
Q Consensus 649 ~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~ 728 (1082)
+.++... ....... + + +. ..
T Consensus 267 ------------------------------------~~~~~~~----~~~~~~~--------~-------~--~~--~~- 286 (552)
T TIGR03719 267 ------------------------------------ALKRELE----WVRSSPK--------A-------R--QA--KS- 286 (552)
T ss_pred ------------------------------------HHHHHHH----HHHhhhh--------h-------H--HH--HH-
Confidence 0000000 0000000 0 0 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 729 KQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPV 808 (1082)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri 808 (1082)
+.. ....++.
T Consensus 287 ~~~----------------------------------------------------------------------~~~~~~~ 296 (552)
T TIGR03719 287 KAR----------------------------------------------------------------------LARYEEL 296 (552)
T ss_pred HHH----------------------------------------------------------------------HHHHHhh
Confidence 000 0000000
Q ss_pred HHhhcccccCCCCCCC--CcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcc
Q 001411 809 FGILYRKTAIQPDDPA--SKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRF 886 (1082)
Q Consensus 809 ~~~~~~~~~~~~~~~~--~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl 886 (1082)
.+ ...+..++.... .......+..|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+
T Consensus 297 ~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~ 371 (552)
T TIGR03719 297 LS--QEFQKRNETAEIYIPPGPRLGDKVIEAENLSKGFG---DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQ 371 (552)
T ss_pred hh--hcccccCCCceeecCCCCCCCCeEEEEeeEEEEEC---CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCC
Confidence 00 000000000000 000001123599999999996 34699999999999999999999999999999999999
Q ss_pred ccCCccEEEECCccCCCCCHHHHhcceEEEcccCc-ccc-ccHHHHhccCCCC--CC--HHHHHHHHHHhcHHHHHhhCc
Q 001411 887 YDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPA-LFS-TTIYENIKYGNED--AS--EIELMKATKAANAHGFISRMP 960 (1082)
Q Consensus 887 ~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~-Lf~-gTIreNl~~~~~~--~~--d~ei~~al~~a~l~~~i~~lp 960 (1082)
.+|++|+|.+++ ++ +|+|+||++. +++ .|+++|+.++... .. +.+..++++..++
T Consensus 372 ~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l-------- 432 (552)
T TIGR03719 372 EQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNF-------- 432 (552)
T ss_pred CCCCCeEEEECC-ce----------EEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCC--------
Confidence 999999999954 21 6999999973 554 5999999875321 11 2222333333333
Q ss_pred ccccc-cccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-c
Q 001411 961 EGYQS-HVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-A 1038 (1082)
Q Consensus 961 ~gldt-~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~ 1038 (1082)
+. ........||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++. . .|||+|||+++.+.. |
T Consensus 433 ---~~~~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~ 507 (552)
T TIGR03719 433 ---KGSDQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GCAVVISHDRWFLDRIA 507 (552)
T ss_pred ---ChhHhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhC
Confidence 21 123344679999999999999999999999999999999999999999999986 3 489999999999876 9
Q ss_pred CEEEEEeC-CEEEE-ecChHHHhh
Q 001411 1039 DKIAVLQQ-GKVAE-IGSHEQLLR 1060 (1082)
Q Consensus 1039 DrI~Vl~~-G~ive-~G~~~eLl~ 1060 (1082)
|+|++|++ |++++ .|+++++.+
T Consensus 508 d~i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 508 THILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred CEEEEEECCCeEEEeCCCHHHHHH
Confidence 99999997 68874 488877765
No 83
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.5e-65 Score=676.01 Aligned_cols=471 Identities=19% Similarity=0.292 Sum_probs=377.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 578 TLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRL 657 (1082)
Q Consensus 578 ~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 657 (1082)
...+.++...++..+|+++++.+..+++. .++|+++|++++|++.++..+. .+..++...+.+++++++++. .+
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~--~~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~---~l 439 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKK--FTSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQ---QL 439 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCC--CCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH---HH
Confidence 46777888888889999999999998864 7899999999999999999874 455555555544444443332 12
Q ss_pred HHHHHH---HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHH
Q 001411 658 AAVVAA---SLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLR 734 (1082)
Q Consensus 658 ~~~~l~---~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (1082)
++..++ ++.+++.+..+..+..++..++..+...+..+.+.|.++|+++||.|++|+.+.+++.+..++..+...+.
T Consensus 440 g~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~ 519 (1622)
T PLN03130 440 GVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKA 519 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 222221 11122222223334444455555566677779999999999999999999999999988777766555444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 001411 735 GHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYR 814 (1082)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~ 814 (1082)
.....+...+..... ..+...+++.+++..+.++.+.+++++........++..+...+..+..+..+.+|+.++++.
T Consensus 520 ~~~~~~~~~~~~~~~--~~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~ 597 (1622)
T PLN03130 520 QLLSAFNSFILNSIP--VLVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLA 597 (1622)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 444443332222211 134456678888888999999999888777777788888888889999999999999999865
Q ss_pred cccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCc-cE
Q 001411 815 KTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPIS-GT 893 (1082)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~-G~ 893 (1082)
++..+...+ +..+..+.|+|+||+|+|+.+++.++|+|+||+|++||+++|||+||||||||+++|+|+++|++ |+
T Consensus 598 ~e~~~~~~~---~~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~ 674 (1622)
T PLN03130 598 EERVLLPNP---PLEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDAS 674 (1622)
T ss_pred cccccccCC---cccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCce
Confidence 432211111 11112357999999999985445689999999999999999999999999999999999999999 99
Q ss_pred EEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCC
Q 001411 894 VLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQ 973 (1082)
Q Consensus 894 I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~ 973 (1082)
|.+ |.+|+||||+|.+|+|||||||.+|.+ .++++++++++.|+++++++.||+|++|.|||+|.+
T Consensus 675 I~l-------------~~~Iayv~Q~p~LfngTIreNI~fg~~-~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~ 740 (1622)
T PLN03130 675 VVI-------------RGTVAYVPQVSWIFNATVRDNILFGSP-FDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVN 740 (1622)
T ss_pred EEE-------------cCeEEEEcCccccCCCCHHHHHhCCCc-ccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCC
Confidence 974 678999999999999999999999876 689999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHH-HHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEe
Q 001411 974 LSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQ-EALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEI 1052 (1082)
Q Consensus 974 LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~-~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~ 1052 (1082)
||||||||||||||++++|+|+|||||||+||+++++.|. +.++...+++|+|+||||++.+..||+|++|++|+|+|+
T Consensus 741 LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~ 820 (1622)
T PLN03130 741 ISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEE 820 (1622)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEe
Confidence 9999999999999999999999999999999999998774 567777789999999999999999999999999999999
Q ss_pred cChHHHhhhccchHHHHHHHhh
Q 001411 1053 GSHEQLLRKENGIYKQLIRLQQ 1074 (1082)
Q Consensus 1053 G~~~eLl~~~~g~f~~l~~~~~ 1074 (1082)
|+|++|++ +++.|+++++.+.
T Consensus 821 Gt~~eL~~-~~~~~~~l~~~~~ 841 (1622)
T PLN03130 821 GTYEELSN-NGPLFQKLMENAG 841 (1622)
T ss_pred CCHHHHHh-cchhHHHHHHhcc
Confidence 99999997 6789999987643
No 84
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=9e-68 Score=580.56 Aligned_cols=410 Identities=28% Similarity=0.411 Sum_probs=372.5
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHH
Q 001411 17 FAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKE 96 (1082)
Q Consensus 17 ~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~ 96 (1082)
+.++|.+.+++.++.++...+++.+..+--...++-.++..+...+++.......+|.++|+++|+.+...++|.+.+.+
T Consensus 151 l~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~ 230 (580)
T COG4618 151 LAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAA 230 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHH
Confidence 55667778888888777777777777777777777778888888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 97 ALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAA 176 (1082)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ 176 (1082)
+...+.+..-..+...+++..+-++....++..|+|++++|++|+|.+++.-..+.....|+-.....|.++..++.|.+
T Consensus 231 ~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~ 310 (580)
T COG4618 231 YLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYK 310 (580)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHH
Confidence 99998888888888888888899999999999999999999999997766543333444578889999999999999999
Q ss_pred HHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhC
Q 001411 177 NIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRL 256 (1082)
Q Consensus 177 ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~ 256 (1082)
|+.++|+..+... .....|.+++.+.++++++.-|+.++++|+++||++++||.++||||||||||||.++|.|.
T Consensus 311 Rl~~lL~~~p~~~-----~~m~LP~P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~ 385 (580)
T COG4618 311 RLNELLAELPAAA-----ERMPLPAPQGALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGI 385 (580)
T ss_pred HHHHHHHhCcccc-----CCCCCCCCCceeeEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcc
Confidence 9999997655432 22455677889999999999888888899999999999999999999999999999999999
Q ss_pred CCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCcccc
Q 001411 257 YEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQ 336 (1082)
Q Consensus 257 ~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~ 336 (1082)
++|.+|.|++||.++++++.+.+-++|||.||+..||+|||+|||+-..++.+.+++.+|++.++.||.|.++|+||||.
T Consensus 386 w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~ 465 (580)
T COG4618 386 WPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTR 465 (580)
T ss_pred cccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCc
Confidence 99999999999999999999999999999999999999999999998777888999999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCccccccCCEEEEEe
Q 001411 337 VGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRDVDTIMVLK 415 (1082)
Q Consensus 337 ~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~~d~i~~l~ 415 (1082)
||+.|..|||||||||+||||||.||.+++||||.|+||.+.|+.+.++|.+.+ ++.|+|+||||++.+..+|+|++|+
T Consensus 466 iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~ 545 (580)
T COG4618 466 IGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQ 545 (580)
T ss_pred cCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeec
Confidence 999999999999999999999999999999999999999999999999999875 5789999999999999999999999
Q ss_pred CCEEEEecCchhhhhc
Q 001411 416 NGQVVESGTHVDLISK 431 (1082)
Q Consensus 416 ~G~i~~~g~~~~l~~~ 431 (1082)
+|++...|+.+|++++
T Consensus 546 ~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 546 DGRIAAFGPREEVLAK 561 (580)
T ss_pred CChHHhcCCHHHHHHH
Confidence 9999999999998864
No 85
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=1.3e-65 Score=622.24 Aligned_cols=472 Identities=19% Similarity=0.242 Sum_probs=372.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 566 TIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVT 645 (1082)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~ 645 (1082)
..++.++..++..+.+.++..++|.++++++++.|++||+. +++|++++|+++|++.+...+. .+..++.+++.+++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~--~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~ 137 (547)
T PRK10522 61 LMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQ--LGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLG 137 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc--cCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 34566778888899999999999999999999999999974 8899999999999999998765 46777888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcH---HHHHHHHHH
Q 001411 646 AFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIE---KRISIQFAS 722 (1082)
Q Consensus 646 ~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~---~~~~~~~~~ 722 (1082)
+++++++++|.+++++++++|+.+++.+...+..++..++.++...+..+++.|.++|+++++ ++.+ +.+.+++.+
T Consensus 138 ~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~ 216 (547)
T PRK10522 138 SAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEP 216 (547)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhH
Confidence 999999999999999999999887777766666666667777888889999999999999995 5443 456777777
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 723 ELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGS 802 (1082)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1082)
..++..+...+..........+.........++.++++... +..+.+..............++......+..+..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~ 293 (547)
T PRK10522 217 DAQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQ 293 (547)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77776665555444333333322222222222223333221 111222222222223334567888888889999999
Q ss_pred HHHHHHHHhhcccccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHH
Q 001411 803 QALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISL 882 (1082)
Q Consensus 803 ~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~l 882 (1082)
.+.+|+.++.+.+++.+.. .. ...+..+.|+|+||+|+|++ +.++|+|+||+|+|||++||+||||||||||+++
T Consensus 294 ~a~~ri~~l~~~~~~~~~~--~~-~~~~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~l 368 (547)
T PRK10522 294 VAFNKLNKLALAPYKAEFP--RP-QAFPDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAML 368 (547)
T ss_pred HHHHHHHHHhccccccccc--cc-cccCcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 9999999986543221111 11 11112357999999999973 3479999999999999999999999999999999
Q ss_pred HhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCccc
Q 001411 883 VMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEG 962 (1082)
Q Consensus 883 L~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~g 962 (1082)
|+|+|+|++|+|.+||+|+++++.+++|++++||||||++|++|+++| .++.++++++++++.+++.+++.. |+|
T Consensus 369 l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n----~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 443 (547)
T PRK10522 369 LTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE----GKPANPALVEKWLERLKMAHKLEL-EDG 443 (547)
T ss_pred HhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc----cCchHHHHHHHHHHHcCCchhhhc-ccc
Confidence 999999999999999999999999999999999999999999999999 245778888888888887766542 443
Q ss_pred ccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhccCE
Q 001411 963 YQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRNADK 1040 (1082)
Q Consensus 963 ldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~Dr 1040 (1082)
. .+|.+||||||||++||||++++|+|||||||||+||+++++.+.+.+.+.. +++|+|+||||++++..||+
T Consensus 444 ~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~ 518 (547)
T PRK10522 444 R-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADR 518 (547)
T ss_pred C-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCE
Confidence 2 1478999999999999999999999999999999999999999999998654 48999999999999999999
Q ss_pred EEEEeCCEEEEe-cChHHHh
Q 001411 1041 IAVLQQGKVAEI-GSHEQLL 1059 (1082)
Q Consensus 1041 I~Vl~~G~ive~-G~~~eLl 1059 (1082)
|++|++|+++|. |++.+-.
T Consensus 519 i~~l~~G~i~e~~~~~~~~~ 538 (547)
T PRK10522 519 LLEMRNGQLSELTGEERDAA 538 (547)
T ss_pred EEEEECCEEEEecCCchhhh
Confidence 999999999987 5554443
No 86
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=5.2e-66 Score=625.40 Aligned_cols=406 Identities=30% Similarity=0.393 Sum_probs=355.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 001411 5 HALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEA 84 (1082)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 84 (1082)
.++..+..+++.++++++++|.+++++++.+|+++++...+.++.++..++.++..++..+.+.|.++|+++||+|+.|+
T Consensus 124 ~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~ 203 (529)
T TIGR02857 124 QLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAK 203 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccH
Confidence 33445556666677788899999999988888888777778888888888888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 85 KAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPN 164 (1082)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~ 164 (1082)
.+.++|++..++..+...+..+.......+..++..+..+++++++++.+.+|.+|+|.+++++.+......|+..+...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~ 283 (529)
T TIGR02857 204 AQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGAD 283 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888877777666666655555555555555556677777899999998887766666666788888899
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCC
Q 001411 165 LAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGS 244 (1082)
Q Consensus 165 ~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGs 244 (1082)
+..+.+++.+++|+.++++.+++.. . ... ......+.|+++||+|+||++++++|+|+||+++|||+++|+|||||
T Consensus 284 ~~~~~~~~~~~~ri~~ll~~~~~~~-~--~~~-~~~~~~~~i~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGs 359 (529)
T TIGR02857 284 YHARADGVAAAEALFAVLDAPRPLA-G--KAP-VTAAPAPSLEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGA 359 (529)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccC-C--CcC-CCCCCCCeEEEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCC
Confidence 9999999999999999997432211 1 111 11111247999999999986555699999999999999999999999
Q ss_pred cHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHH
Q 001411 245 GKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHS 324 (1082)
Q Consensus 245 GKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~ 324 (1082)
|||||+++|+|+++|++|+|.+||.|+++++.+++|++++||+|+|++|++||+|||.++.++.+++++.++|+.+++++
T Consensus 360 GKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~ 439 (529)
T TIGR02857 360 GKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDE 439 (529)
T ss_pred CHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888999999999999999
Q ss_pred HHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccc
Q 001411 325 FVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLST 404 (1082)
Q Consensus 325 ~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~ 404 (1082)
+++++|+|+||.+||+|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+.++.+++|+|+||||++.
T Consensus 440 ~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~ 519 (529)
T TIGR02857 440 FVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLAL 519 (529)
T ss_pred HHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred cccCCEEEEE
Q 001411 405 VRDVDTIMVL 414 (1082)
Q Consensus 405 ~~~~d~i~~l 414 (1082)
++.||+|++|
T Consensus 520 ~~~~d~i~~l 529 (529)
T TIGR02857 520 AERADRIVVL 529 (529)
T ss_pred HHhCCEEEeC
Confidence 9999999985
No 87
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-66 Score=631.72 Aligned_cols=201 Identities=27% Similarity=0.422 Sum_probs=165.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++. .++
T Consensus 312 ~l~~~~l~~~y~---~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 312 LLKMEKVSAGYG---DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred eEEEEeeEEEeC---CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 599999999996 346999999999999999999999999999999999999999999999741 269
Q ss_pred EEEcccC--cccc-ccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHcc
Q 001411 914 GLVQQEP--ALFS-TTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILK 990 (1082)
Q Consensus 914 ~~VpQdp--~Lf~-gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~ 990 (1082)
+|+||++ .++. .|+.+|+....+...++++.+.++..++.+ ..+......||||||||++||||+++
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~----------~~~~~~~~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQG----------DKVTEETRRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCCh----------hHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 9999985 3443 478888742122223444555555554421 11222345799999999999999999
Q ss_pred CCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEE-EecChHHHhh
Q 001411 991 NPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVA-EIGSHEQLLR 1060 (1082)
Q Consensus 991 ~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv-e~G~~~eLl~ 1060 (1082)
+|++|||||||++||+.+...+.+.|++. + .|||+|||+++.+.. ||+|++|++|+++ ..|++++..+
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~-~-gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF-E-GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 99999999999999999999999999986 4 499999999999965 9999999999997 6799988754
No 88
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=3.3e-65 Score=674.76 Aligned_cols=432 Identities=23% Similarity=0.307 Sum_probs=359.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 001411 5 HALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEA 84 (1082)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 84 (1082)
.++..+..++++++++++.+|.++++++.+++++.++..++.+..++..+......+...+.+.|+++|+++||+||+++
T Consensus 1085 ~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~ 1164 (1522)
T TIGR00957 1085 MFMGSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQE 1164 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHH
Confidence 44556666677777777778876665555555555555555555555555566667788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 001411 85 KAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVR-HGDTNGGKAFTTIINVIFSGFALGQAAP 163 (1082)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~-~~~l~~g~~~~~~~~~~~~~~~l~~~~~ 163 (1082)
.+.+++.+..+...+..........+......++. .+++++.+++.+. .+.+++|.+.+++.+.+....++..+..
T Consensus 1165 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~ 1241 (1522)
T TIGR00957 1165 RFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVG---NCIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVR 1241 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888777776665554444444333333222 2233444555554 5789999887777777777788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCC--CCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcC
Q 001411 164 NLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLP--KLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGP 241 (1082)
Q Consensus 164 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~--~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~ 241 (1082)
.+..+..+..|.+|+.++++.+++.+...+. ...++ +..+.|+|+||+|+|+++..++|+|+||+|+|||++||||+
T Consensus 1242 ~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~-~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGr 1320 (1522)
T TIGR00957 1242 MSSEMETNIVAVERLKEYSETEKEAPWQIQE-TAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGR 1320 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccccC-CCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECC
Confidence 9999999999999999999765442210011 01111 23478999999999976545699999999999999999999
Q ss_pred CCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhc
Q 001411 242 SGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAAN 321 (1082)
Q Consensus 242 sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~ 321 (1082)
||||||||+++|.|+++|++|+|.+||+|+++++.+++|++|+||||||.||+|||||||.... +.+++++++|++.++
T Consensus 1321 TGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~ 1399 (1522)
T TIGR00957 1321 TGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAH 1399 (1522)
T ss_pred CCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999998332 468899999999999
Q ss_pred hHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccC
Q 001411 322 AHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHR 401 (1082)
Q Consensus 322 ~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~ 401 (1082)
+++++.++|+|+||.+||+|.+||||||||++|||||+++|+|||||||||+||+++++.+++.|++..+++|+|+||||
T Consensus 1400 l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHR 1479 (1522)
T TIGR00957 1400 LKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHR 1479 (1522)
T ss_pred cHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred ccccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHh
Q 001411 402 LSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNL 441 (1082)
Q Consensus 402 ~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 441 (1082)
++++..+|+|+||++|+|+|.|+|+||+++++.|+++++.
T Consensus 1480 l~ti~~~DrIlVld~G~IvE~G~~~eLl~~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1480 LNTIMDYTRVIVLDKGEVAEFGAPSNLLQQRGIFYSMAKD 1519 (1522)
T ss_pred HHHHHhCCEEEEEECCEEEEECCHHHHHhCCCHHHHHHHH
Confidence 9999999999999999999999999999999999998864
No 89
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=5.3e-64 Score=651.41 Aligned_cols=213 Identities=23% Similarity=0.402 Sum_probs=177.7
Q ss_pred cEEEEeEEEECCCC----------CCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC--CccEEEECCccC
Q 001411 834 NIELRNVSFKYPVR----------PDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP--ISGTVLIDGYDI 901 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~----------~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p--~~G~I~idG~di 901 (1082)
.+.|+||++..+.. ....+|+|||++|+|||.+||+||||||||||+++|.|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 69999999987521 123699999999999999999999999999999999999874 689999999886
Q ss_pred CCCCHHHHhcceEEEcccCcccc-ccHHHHhccCC----C-CCCHHH----HHHHHHHhcHHHHHhhCcccccccccCCC
Q 001411 902 RTLNLRSLRRKIGLVQQEPALFS-TTIYENIKYGN----E-DASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRG 971 (1082)
Q Consensus 902 ~~i~~~~lR~~i~~VpQdp~Lf~-gTIreNl~~~~----~-~~~d~e----i~~al~~a~l~~~i~~lp~gldt~v~e~G 971 (1082)
+ ...+|+.++||+|++.+++ .|++|||.++. + +.++++ +.+.++..++.+. .|+.+|..+
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 4 3457788999999998776 59999997642 1 223332 4455666665432 467777554
Q ss_pred -CCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchh-h-hccCEEEEEeC-
Q 001411 972 -VQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLST-I-RNADKIAVLQQ- 1046 (1082)
Q Consensus 972 -~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~t-i-~~~DrI~Vl~~- 1046 (1082)
..||||||||++|||||+.+|+||+||||||+||+.+...+.+.|++.. +|+|||+++|+++. + ..+|++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 6799999999999999999999999999999999999999999999875 48999999999984 4 56999999996
Q ss_pred CEEEEecChH
Q 001411 1047 GKVAEIGSHE 1056 (1082)
Q Consensus 1047 G~ive~G~~~ 1056 (1082)
|+++.+|++.
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999874
No 90
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.3e-64 Score=620.83 Aligned_cols=201 Identities=24% Similarity=0.429 Sum_probs=164.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+ +.++|+|+||+|++|+++||+|+||||||||+++|.|+++|++|+|.+ |.++ +|
T Consensus 319 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i 384 (635)
T PRK11147 319 VFEMENVNYQID---GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EV 384 (635)
T ss_pred eEEEeeeEEEEC---CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EE
Confidence 499999999996 346999999999999999999999999999999999999999999999 4432 59
Q ss_pred EEEcccC-cccc-ccHHHHhccCCCCC--C--HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 914 GLVQQEP-ALFS-TTIYENIKYGNEDA--S--EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 914 ~~VpQdp-~Lf~-gTIreNl~~~~~~~--~--d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
+|++|++ .+++ .|+.+|+.++.+.. . +.++.+.++..++.+ +..+.+ ...||||||||++||||
T Consensus 385 ~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~----~~~LSgGekqRl~la~a 454 (635)
T PRK11147 385 AYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHP------KRAMTP----VKALSGGERNRLLLARL 454 (635)
T ss_pred EEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCH------HHHhCh----hhhCCHHHHHHHHHHHH
Confidence 9999986 4655 49999998643321 1 223333333333311 112333 35699999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEe-CCEEEEe-cChHHHhh
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQ-QGKVAEI-GSHEQLLR 1060 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~-~G~ive~-G~~~eLl~ 1060 (1082)
++.+|++|||||||++||+.+...+.+.|++. +.|||+|||+++.+.. ||+|++|+ +|+|.++ |++++.++
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999999999999999999999875 4599999999999865 99999998 8999875 78888754
No 91
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.5e-64 Score=662.58 Aligned_cols=437 Identities=22% Similarity=0.254 Sum_probs=351.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 001411 5 HALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEA 84 (1082)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 84 (1082)
.++..+..++++++++++.+|.+.++++.++.++..+...+.+..++..+......+...+.+.|+++|+++||+|++++
T Consensus 1078 ~~~~~~~~~i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~ 1157 (1560)
T PTZ00243 1078 YLLQCLFSICSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAH 1157 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHH
Confidence 44556666677777777777744333222222222233444455555555555667778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCCChHHHHHHHHHHHHHHHHHHHHH
Q 001411 85 KAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILV--RHGDTNGGKAFTTIINVIFSGFALGQAA 162 (1082)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--~~~~l~~g~~~~~~~~~~~~~~~l~~~~ 162 (1082)
.+.+++.+..++..+...+......+......++..+..+++.+++.+.+ ..+.+++|.+..++.+......++..+.
T Consensus 1158 ~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~ 1237 (1560)
T PTZ00243 1158 LVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLV 1237 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888877776665555555544444444443333333444332 3455788876555555566667888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCC------------------------CCCCC----CCCCCCCcEEEEEEEEE
Q 001411 163 PNLAAIAKGKAAAANIISIIKENSHSSERP------------------------GDDGI----TLPKLAGQIEFSEVCFA 214 (1082)
Q Consensus 163 ~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~------------------------~~~~~----~~~~~~~~i~~~~v~~~ 214 (1082)
..+..+..++.|.+|+.++++..++.+.+. .+... ......+.|+|+||+|+
T Consensus 1238 ~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~ 1317 (1560)
T PTZ00243 1238 RQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMR 1317 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEE
Confidence 899999999999999999996432211000 00000 00112467999999999
Q ss_pred CCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcCh
Q 001411 215 YPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFA 294 (1082)
Q Consensus 215 y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~ 294 (1082)
|++...++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++|+||||||.||+
T Consensus 1318 Y~~~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~ 1397 (1560)
T PTZ00243 1318 YREGLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFD 1397 (1560)
T ss_pred eCCCCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCcccc
Confidence 97654459999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccC-CCeeEEeCcccC
Q 001411 295 TSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRN-PKILLLDEATSA 373 (1082)
Q Consensus 295 ~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~-~~illlDEpts~ 373 (1082)
+||||||..+. ..+++++++||+.+++++++.++|+|+||.+||+|.+|||||||||+|||||+++ |+|||||||||+
T Consensus 1398 gTIreNIdp~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSa 1476 (1560)
T PTZ00243 1398 GTVRQNVDPFL-EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATAN 1476 (1560)
T ss_pred ccHHHHhCccc-CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCcc
Confidence 99999998653 5688999999999999999999999999999999999999999999999999995 899999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhc-CchhHHHHHhh
Q 001411 374 LDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK-GGEYAALVNLQ 442 (1082)
Q Consensus 374 LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~~~ 442 (1082)
||+++++.+++.|++..+++|+|+||||++++..||+|+||++|+|++.|+|+||+++ ++.|++++..+
T Consensus 1477 LD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1477 IDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 9999999999999998889999999999999999999999999999999999999975 78999998654
No 92
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.2e-64 Score=618.69 Aligned_cols=201 Identities=29% Similarity=0.406 Sum_probs=165.3
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcc
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 912 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 912 (1082)
..|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+++ +.+
T Consensus 507 ~~L~~~~ls~~y~~--~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~ 573 (718)
T PLN03073 507 PIISFSDASFGYPG--GPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVR 573 (718)
T ss_pred ceEEEEeeEEEeCC--CCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------cee
Confidence 35999999999962 33699999999999999999999999999999999999999999999875 347
Q ss_pred eEEEcccCccccccHHHHhcc----CCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHH
Q 001411 913 IGLVQQEPALFSTTIYENIKY----GNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAI 988 (1082)
Q Consensus 913 i~~VpQdp~Lf~gTIreNl~~----~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAl 988 (1082)
|+|+||++. ...++.+|... ..+..+++++.++++..++.+.. .......||||||||++||||+
T Consensus 574 igyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~----------~~~~~~~LSgGqkqRvaLAraL 642 (718)
T PLN03073 574 MAVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNL----------ALQPMYTLSGGQKSRVAFAKIT 642 (718)
T ss_pred EEEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHH----------hcCCccccCHHHHHHHHHHHHH
Confidence 999999973 22345555321 12334566777777777764211 1223467999999999999999
Q ss_pred ccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEE-EecChHHHh
Q 001411 989 LKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVA-EIGSHEQLL 1059 (1082)
Q Consensus 989 L~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv-e~G~~~eLl 1059 (1082)
+++|++|||||||++||+.+...+.+.+++. + .|+|+|||+++.+.. ||+|++|++|+++ ..|++++..
T Consensus 643 ~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 643 FKKPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 9999999999999999999999999999875 3 499999999999975 9999999999998 568887754
No 93
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-64 Score=570.69 Aligned_cols=456 Identities=26% Similarity=0.421 Sum_probs=354.5
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHH-Hhhhc
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW-LREQM 283 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~i 283 (1082)
-++++|++++|++- ++|+|+||++.+||++|++|+||||||||+|+|+|.|+|++|+|.+||++....++.+ ....|
T Consensus 8 ll~~~~i~K~FggV--~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~GI 85 (500)
T COG1129 8 LLELRGISKSFGGV--KALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAGI 85 (500)
T ss_pred eeeeecceEEcCCc--eeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCCc
Confidence 48899999999853 4999999999999999999999999999999999999999999999999998776654 55679
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCCCC------HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 284 GLVSQEPALFAT-SIANNILLGKEDAS------MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~~~------~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
+.|+||..|++. ||.|||.+|++... ..++.+.++ +.++++ |.+........+||+||||.|+|||
T Consensus 86 ~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~-----~~l~~l--g~~~~~~~~v~~LsiaqrQ~VeIAr 158 (500)
T COG1129 86 ATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRAR-----ELLARL--GLDIDPDTLVGDLSIAQRQMVEIAR 158 (500)
T ss_pred EEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHH-----HHHHHc--CCCCChhhhhhhCCHHHHHHHHHHH
Confidence 999999999987 99999999976432 233333332 223333 2211133444589999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCc-hhhhhcCc
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTH-VDLISKGG 433 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~-~~l~~~~~ 433 (1082)
|+..+++|+|||||||+|+....+.+++.+++++ +|.++|+||||++++.. ||||.||+||+.+..++. .++-.
T Consensus 159 Al~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~--- 235 (500)
T COG1129 159 ALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSE--- 235 (500)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCH---
Confidence 9999999999999999999999999999999986 58999999999999865 999999999999875531 11100
Q ss_pred hhHHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCCCchhHHHHHHHhcchhHHHH
Q 001411 434 EYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAV 513 (1082)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (1082)
+ . +.
T Consensus 236 ----------------------------------------------------~----------~---lv----------- 239 (500)
T COG1129 236 ----------------------------------------------------D----------E---LV----------- 239 (500)
T ss_pred ----------------------------------------------------H----------H---HH-----------
Confidence 0 0 00
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 514 LGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMF 593 (1082)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 593 (1082)
..+
T Consensus 240 ------------------------~~M----------------------------------------------------- 242 (500)
T COG1129 240 ------------------------RLM----------------------------------------------------- 242 (500)
T ss_pred ------------------------HHh-----------------------------------------------------
Confidence 000
Q ss_pred HHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 594 SAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFV 673 (1082)
Q Consensus 594 ~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~ 673 (1082)
.|+
T Consensus 243 -----------------vGr------------------------------------------------------------ 245 (500)
T COG1129 243 -----------------VGR------------------------------------------------------------ 245 (500)
T ss_pred -----------------hCc------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 674 AEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSY 753 (1082)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1082)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccccc
Q 001411 754 ALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKG 833 (1082)
Q Consensus 754 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g 833 (1082)
+.-+..+. .+.. .+...
T Consensus 246 --------------------------------------------------------~~~~~~~~-~~~~------~~~~~ 262 (500)
T COG1129 246 --------------------------------------------------------ELEDLFPE-PPEE------GIGEP 262 (500)
T ss_pred --------------------------------------------------------chhhhccc-cccc------CCCCc
Confidence 00000000 0000 00112
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCH-HHHhcc
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL-RSLRRK 912 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~-~~lR~~ 912 (1082)
.++++|++.. ..++|+||++++||.+||.|--|||+|-++.+|+|..++.+|+|.+||.++.--++ +..+..
T Consensus 263 ~l~v~~l~~~-------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~Ai~~G 335 (500)
T COG1129 263 VLEVRNLSGG-------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRDAIKAG 335 (500)
T ss_pred EEEEecCCCC-------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHHHHHcC
Confidence 3678887642 14799999999999999999999999999999999998999999999998876664 578999
Q ss_pred eEEEcccCc----cccccHHHHhccCC-CCCCHH-HHHHHHHHhcHHHHHhhCcc---cccccccCCCCCCChhHHHHHH
Q 001411 913 IGLVQQEPA----LFSTTIYENIKYGN-EDASEI-ELMKATKAANAHGFISRMPE---GYQSHVGDRGVQLSGGQKQRVA 983 (1082)
Q Consensus 913 i~~VpQdp~----Lf~gTIreNl~~~~-~~~~d~-ei~~al~~a~l~~~i~~lp~---gldt~v~e~G~~LSgGQrQrla 983 (1082)
|+|||-|.. +...||++|+.+.. ...+.. -+....++....+++.+|.- +.+.++ .+||||.+|+++
T Consensus 336 i~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v----~~LSGGNQQKVv 411 (500)
T COG1129 336 IAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPI----GTLSGGNQQKVV 411 (500)
T ss_pred CEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchh----hcCCchhhhhHH
Confidence 999998874 44679999998751 111100 24445556666777777632 233333 569999999999
Q ss_pred HHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-ccCEEEEEeCCEEEEecChH
Q 001411 984 IARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHE 1056 (1082)
Q Consensus 984 LARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~ 1056 (1082)
|||+|..+|+||||||||.++|..+.+.|.+.|+++. +|.+||+||..+.++. .||||+||.+|+|+..=+.+
T Consensus 412 larwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e~~~~ 486 (500)
T COG1129 412 LARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGELDRE 486 (500)
T ss_pred HHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEEeccc
Confidence 9999999999999999999999999999999999976 6899999999999986 59999999999998743333
No 94
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=2.7e-61 Score=591.49 Aligned_cols=529 Identities=17% Similarity=0.122 Sum_probs=426.2
Q ss_pred HHHHHHHhcchhH-----HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 001411 498 IWELLKLNAAEWP-----YAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLL 572 (1082)
Q Consensus 498 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 572 (1082)
+.+++++..++|+ .+++.+++.++........++....+++.....+..........+.++++++.++..+..++
T Consensus 79 ~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~ 158 (659)
T TIGR00954 79 LDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYL 158 (659)
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555666665 45555555555555566666666776666543322222222333444555556666666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 573 QHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFI 652 (1082)
Q Consensus 573 ~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~ 652 (1082)
..++......++..++|.+.+++....++.|||. ++|++.+|+++|++.+.+.+...+..++..++.++++++.++.
T Consensus 159 ~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~---~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~ 235 (659)
T TIGR00954 159 LKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS---RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLT 235 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC---CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777888888899999999999988889999973 6899999999999999999999999999999998888887775
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHH
Q 001411 653 -LSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQA 731 (1082)
Q Consensus 653 -~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~ 731 (1082)
++|.+++++++.+|+..++..+..+...+...+.++..++..+.+.|.++|+++|++|+.++.+.+++.+..++..+..
T Consensus 236 ~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~ 315 (659)
T TIGR00954 236 ALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHL 315 (659)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988888888888888888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHH-h----CCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Q 001411 732 LLRGHISGFGYGVSQLLSLCS-Y-ALGLWYASVLIK-Q----KGSNFGDIMKSFMV----LIITALAVAETLALAPDIVK 800 (1082)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~-~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 800 (1082)
.+...+.++...+..++.... . .+.++.|...+. . |.++.|.++..+.. ......++..+......+..
T Consensus 316 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~ 395 (659)
T TIGR00954 316 NLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTR 395 (659)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888777765432 2 222333332332 2 67888876653332 33456778888888999999
Q ss_pred HHHHHHHHHHhhcccccCC------CCCCC--C--------------cccccccccEEEEeEEEECCCCCCcccccceeE
Q 001411 801 GSQALGPVFGILYRKTAIQ------PDDPA--S--------------KEVTEIKGNIELRNVSFKYPVRPDITIFENLNL 858 (1082)
Q Consensus 801 ~~~a~~ri~~~~~~~~~~~------~~~~~--~--------------~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl 858 (1082)
...+.+|+.++++..++.+ +..+. . .......+.|+++||+++|++ +.++|+|+||
T Consensus 396 ~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~isl 473 (659)
T TIGR00954 396 LAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLSF 473 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecceE
Confidence 9999999999987543211 00000 0 001123467999999999973 3479999999
Q ss_pred EeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCC---
Q 001411 859 KVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGN--- 935 (1082)
Q Consensus 859 ~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~--- 935 (1082)
+|++||++||+||||||||||+++|.|+++|++|+|.+|+ |++++||||+|.+|++|++||+.++.
T Consensus 474 ~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~ 542 (659)
T TIGR00954 474 EVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSE 542 (659)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChh
Confidence 9999999999999999999999999999999999999874 67899999999999999999998863
Q ss_pred ----CCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHH
Q 001411 936 ----EDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENL 1011 (1082)
Q Consensus 936 ----~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~ 1011 (1082)
++.++++++++++.+++++++.+ |.|+||..+ .+.+||||||||++||||++++|++||||||||+||+++++.
T Consensus 543 ~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~ 620 (659)
T TIGR00954 543 DMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGY 620 (659)
T ss_pred hhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHH
Confidence 34578899999999999999988 999999986 467999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCceEEEEecCchhhhccCEEEEEeC
Q 001411 1012 IQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQ 1046 (1082)
Q Consensus 1012 I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~ 1046 (1082)
+++.+++. ++|+|+||||++++..||+|++|+.
T Consensus 621 l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 621 MYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 99999874 8999999999999999999999973
No 95
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=7.4e-64 Score=602.18 Aligned_cols=437 Identities=23% Similarity=0.334 Sum_probs=318.3
Q ss_pred EEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEE-----------ECCeeCCCCCHH
Q 001411 209 SEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKIL-----------LDGHDLKSLQLK 277 (1082)
Q Consensus 209 ~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~-----------~~g~~~~~~~~~ 277 (1082)
++++++|+.+ ..+|++++ .+++||+++|+||||||||||+++|+|+++|++|+|. ++|.++.++..+
T Consensus 77 ~~~~~~yg~~-~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~ 154 (590)
T PRK13409 77 EEPVHRYGVN-GFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKK 154 (590)
T ss_pred cCceEEecCC-ceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHH
Confidence 3488999742 34899999 8999999999999999999999999999999999997 899887644321
Q ss_pred --HHhhh----ceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHH
Q 001411 278 --WLREQ----MGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 351 (1082)
Q Consensus 278 --~~~~~----i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqr 351 (1082)
..+.+ +.|++|.|.+|.+|++||+... ...+++.++++..+ ++........+||||||||
T Consensus 155 ~~~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~---~~~~~~~~~l~~l~-----------l~~~~~~~~~~LSgGe~qr 220 (590)
T PRK13409 155 LYNGEIKVVHKPQYVDLIPKVFKGKVRELLKKV---DERGKLDEVVERLG-----------LENILDRDISELSGGELQR 220 (590)
T ss_pred HhccCcceeecccchhhhhhhhcchHHHHHHhh---hHHHHHHHHHHHcC-----------CchhhcCChhhCCHHHHHH
Confidence 11122 4455666778888999999742 11233444444443 3333344556899999999
Q ss_pred HHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhh
Q 001411 352 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 352 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
++|||||+++|++||||||||+||+.+...+.+.|+++.+++|+|+|||+++.+.. +|+|++|+++. |
T Consensus 221 v~ia~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIivsHd~~~l~~~~D~v~vl~~~~----g------- 289 (590)
T PRK13409 221 VAIAAALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVVEHDLAVLDYLADNVHIAYGEP----G------- 289 (590)
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCc----c-------
Confidence 99999999999999999999999999999999999988668899999999999875 89999997531 1
Q ss_pred cCchhHHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCCCchhHHHHHHHhcchhH
Q 001411 431 KGGEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWP 510 (1082)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (1082)
.|... . .+ . ....
T Consensus 290 ---~~g~~-----------------~---~~---------------------~-------------~~~~---------- 302 (590)
T PRK13409 290 ---AYGVV-----------------S---KP---------------------K-------------GVRV---------- 302 (590)
T ss_pred ---cccee-----------------c---ch---------------------h-------------HHHH----------
Confidence 00000 0 00 0 0000
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 511 YAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRL 590 (1082)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 590 (1082)
+ +. .+. .
T Consensus 303 ------------~-------------i~---------------~~~----------------~----------------- 309 (590)
T PRK13409 303 ------------G-------------IN---------------EYL----------------K----------------- 309 (590)
T ss_pred ------------h-------------HH---------------HHH----------------H-----------------
Confidence 0 00 000 0
Q ss_pred HHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 591 SMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIG 670 (1082)
Q Consensus 591 ~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~ 670 (1082)
T Consensus 310 -------------------------------------------------------------------------------- 309 (590)
T PRK13409 310 -------------------------------------------------------------------------------- 309 (590)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 671 AFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSL 750 (1082)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (1082)
.+... |. ++ +. + .
T Consensus 310 ------~~~~~-----------------e~------~~-----------~~---~---~--------------------- 322 (590)
T PRK13409 310 ------GYLPE-----------------EN------MR-----------IR---P---E--------------------- 322 (590)
T ss_pred ------hcchh-----------------hh------hh-----------cc---c---c---------------------
Confidence 00000 00 00 00 0 0
Q ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCccccc
Q 001411 751 CSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTE 830 (1082)
Q Consensus 751 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~ 830 (1082)
.. .. +..++.... .
T Consensus 323 -----------------------------------------------------------~~-~~-~~~~~~~~~-----~ 336 (590)
T PRK13409 323 -----------------------------------------------------------PI-EF-EERPPRDES-----E 336 (590)
T ss_pred -----------------------------------------------------------Cc-ce-ecCCCcccc-----C
Confidence 00 00 000000000 0
Q ss_pred ccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHh
Q 001411 831 IKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLR 910 (1082)
Q Consensus 831 ~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR 910 (1082)
....++++|++++|+. ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++
T Consensus 337 ~~~~l~~~~ls~~~~~----~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~------------- 399 (590)
T PRK13409 337 RETLVEYPDLTKKLGD----FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE------------- 399 (590)
T ss_pred CceEEEEcceEEEECC----EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------
Confidence 1124999999999952 24899999999999999999999999999999999999999999986
Q ss_pred cceEEEcccCcc-ccccHHHHhccCCCCCC-HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHH
Q 001411 911 RKIGLVQQEPAL-FSTTIYENIKYGNEDAS-EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAI 988 (1082)
Q Consensus 911 ~~i~~VpQdp~L-f~gTIreNl~~~~~~~~-d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAl 988 (1082)
.+++|+||++.+ ++.|+++|+.++..... +....++++..++.+... .....||||||||++|||||
T Consensus 400 ~~i~y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~~-----------~~~~~LSGGe~QRvaiAraL 468 (590)
T PRK13409 400 LKISYKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLLD-----------KNVKDLSGGELQRVAIAACL 468 (590)
T ss_pred eeEEEecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHHh-----------CCcccCCHHHHHHHHHHHHH
Confidence 159999999875 46799999986432222 233455666666654322 23356999999999999999
Q ss_pred ccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecC
Q 001411 989 LKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGS 1054 (1082)
Q Consensus 989 L~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~ 1054 (1082)
+++|+||||||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||||++|++ ++...|+
T Consensus 469 ~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 469 SRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 999999999999999999999999999998743 7899999999999865 999999965 7777665
No 96
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.3e-62 Score=572.01 Aligned_cols=485 Identities=28% Similarity=0.419 Sum_probs=343.5
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.|+++|++++|+++ ++|+|+||++.+|++++|||+||||||||+|+|+|...|++|+|...+. -+++
T Consensus 3 ~i~~~~ls~~~g~~--~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-----------~~v~ 69 (530)
T COG0488 3 MITLENLSLAYGDR--PLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-----------LRVG 69 (530)
T ss_pred eEEEeeeEEeeCCc--eeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-----------ceEE
Confidence 48899999999754 4999999999999999999999999999999999999999999998752 2699
Q ss_pred EEccCCCcChh-cHHHHHhcCCCCCC--HHHHHHHHH-------------------------HhchHHHHhcCCCCcccc
Q 001411 285 LVSQEPALFAT-SIANNILLGKEDAS--MDRVIEAAK-------------------------AANAHSFVEGLPDGYQTQ 336 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~~~--~~~~~~~~~-------------------------~~~~~~~i~~lp~g~~t~ 336 (1082)
|++|++.+.+. ||.+.+..+..... ..+...+.. .+.+...+..| |+...
T Consensus 70 ~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~~ 147 (530)
T COG0488 70 YLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPDE 147 (530)
T ss_pred EeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCcc
Confidence 99999999866 99999987754211 001111100 01122233333 33332
Q ss_pred ccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEe
Q 001411 337 VGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLK 415 (1082)
Q Consensus 337 ~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~ 415 (1082)
.....+||||||.|++|||||+.+||+|||||||++||.++..++.+.|.++. + |+|+||||.+++.. |++|+.++
T Consensus 148 -~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~-g-tviiVSHDR~FLd~V~t~I~~ld 224 (530)
T COG0488 148 -DRPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYP-G-TVIVVSHDRYFLDNVATHILELD 224 (530)
T ss_pred -cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCC-C-cEEEEeCCHHHHHHHhhheEEec
Confidence 34456899999999999999999999999999999999999999999998753 4 99999999999987 79999999
Q ss_pred CCEEEEecCchhhhhcCchhHHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCCCc
Q 001411 416 NGQVVESGTHVDLISKGGEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPS 495 (1082)
Q Consensus 416 ~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (1082)
.|++...+ |.|..+........ . .+
T Consensus 225 ~g~l~~y~---------Gny~~~~~~r~~~~--------------------------------~---~~----------- 249 (530)
T COG0488 225 RGKLTPYK---------GNYSSYLEQKAERL--------------------------------R---QE----------- 249 (530)
T ss_pred CCceeEec---------CCHHHHHHHHHHHH--------------------------------H---HH-----------
Confidence 99875421 33433322111000 0 00
Q ss_pred hhHHHHHHHhcchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 496 PSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHY 575 (1082)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 575 (1082)
.+.+..
T Consensus 250 ---~~~~~~----------------------------------------------------------------------- 255 (530)
T COG0488 250 ---AAAYEK----------------------------------------------------------------------- 255 (530)
T ss_pred ---HHHHHH-----------------------------------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 576 FYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSW 655 (1082)
Q Consensus 576 ~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 655 (1082)
..+..++
T Consensus 256 -------------~~~~~~~------------------------------------------------------------ 262 (530)
T COG0488 256 -------------QQKELAK------------------------------------------------------------ 262 (530)
T ss_pred -------------HHHHHHH------------------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHH
Q 001411 656 RLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRG 735 (1082)
Q Consensus 656 ~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1082)
+..|.+++........++.
T Consensus 263 ---------------------------------------------------------~~~~i~r~~~~~~~~k~a~---- 281 (530)
T COG0488 263 ---------------------------------------------------------EQEWIRRGKAAASKAKKAK---- 281 (530)
T ss_pred ---------------------------------------------------------HHHHHHHHHhccchHHHHH----
Confidence 0000000000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcc
Q 001411 736 HISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGI-LYR 814 (1082)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~-~~~ 814 (1082)
.-....+++... ...
T Consensus 282 ----------------------------------------------------------------sr~k~l~k~~~~~~~~ 297 (530)
T COG0488 282 ----------------------------------------------------------------SRIKRLEKLEARLAEE 297 (530)
T ss_pred ----------------------------------------------------------------HHHHHHHHHHhhhhhc
Confidence 000001111100 000
Q ss_pred cccCCCCCCC--Ccccc---cccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC
Q 001411 815 KTAIQPDDPA--SKEVT---EIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP 889 (1082)
Q Consensus 815 ~~~~~~~~~~--~~~~~---~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p 889 (1082)
.+... ..+. ..++. ..+--++++|++++|+. ++++++++||.|.+|++|||+||||+|||||+++|.|-..|
T Consensus 298 ~~~~~-~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~--~~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~ 374 (530)
T COG0488 298 RPVEE-GKPLAFRFPPPGKRLGKLVLEFENVSKGYDG--GRLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGP 374 (530)
T ss_pred ccccc-cccceeeccCCcccCCCeeEEEeccccccCC--CceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhccc
Confidence 00000 0000 00001 11235999999999963 35799999999999999999999999999999999999999
Q ss_pred CccEEEECCccCCCCCHHHHhcceEEEcccC-ccc-cccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccc
Q 001411 890 ISGTVLIDGYDIRTLNLRSLRRKIGLVQQEP-ALF-STTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHV 967 (1082)
Q Consensus 890 ~~G~I~idG~di~~i~~~~lR~~i~~VpQdp-~Lf-~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v 967 (1082)
.+|+|.+.-. + ++||.+|+- .++ +.|+-+++.-..++..+.++...|.+.++..- -..++|
T Consensus 375 ~~G~v~~g~~-v----------~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~------~~~~~v 437 (530)
T COG0488 375 LSGTVKVGET-V----------KIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGE------DQEKPV 437 (530)
T ss_pred CCceEEeCCc-e----------EEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChH------HHhCch
Confidence 9999998632 2 599999998 444 34899999877666667888888888776532 123344
Q ss_pred cCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeC
Q 001411 968 GDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQ 1046 (1082)
Q Consensus 968 ~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~ 1046 (1082)
..||||||-|+.||+.++.+|.+|||||||.+||.+|...+.++|.++ .-|||+|||+.+.+.. |++|+++++
T Consensus 438 ----~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~ 511 (530)
T COG0488 438 ----GVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHDRYFLDRVATRIWLVED 511 (530)
T ss_pred ----hhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcceEEEEcC
Confidence 469999999999999999999999999999999999999999999886 3399999999999977 999999999
Q ss_pred CEEEEe-cChHHHhhh
Q 001411 1047 GKVAEI-GSHEQLLRK 1061 (1082)
Q Consensus 1047 G~ive~-G~~~eLl~~ 1061 (1082)
++.++ |.+++..+.
T Consensus 512 -~~~~~~g~y~~y~~~ 526 (530)
T COG0488 512 -KVEEFEGGYEDYLEQ 526 (530)
T ss_pred -ceeEcCCCHHHHHHh
Confidence 88887 899888763
No 97
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.1e-61 Score=535.52 Aligned_cols=457 Identities=26% Similarity=0.476 Sum_probs=357.1
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCC-HHHHhhhc
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ-LKWLREQM 283 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~~~~i 283 (1082)
.++++++++.||+ ..+++||||++++||++||+|+||+|||||+++|.|+|+|++|+|.+||++++--+ .+..|..|
T Consensus 4 ~l~~~~itK~f~~--~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~GI 81 (501)
T COG3845 4 ALEMRGITKRFPG--VVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLGI 81 (501)
T ss_pred eEEEeccEEEcCC--EEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcCC
Confidence 5899999999984 45999999999999999999999999999999999999999999999999998554 56678889
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCCC-----CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHh
Q 001411 284 GLVSQEPALFAT-SIANNILLGKEDA-----SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 357 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~~-----~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARa 357 (1082)
|+|+|++.|++. ||.|||.+|.+.. +..+..+ .+.+..+++ |++-...+....||-||||||.|-+|
T Consensus 82 GMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~-----~i~~l~~~y--Gl~vdp~~~V~dLsVG~qQRVEIlKa 154 (501)
T COG3845 82 GMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARA-----RIKELSERY--GLPVDPDAKVADLSVGEQQRVEILKA 154 (501)
T ss_pred cEEeeccccccccchhhhhhhcCccccccccCHHHHHH-----HHHHHHHHh--CCCCCccceeecCCcchhHHHHHHHH
Confidence 999999999987 9999999998743 1222111 111222222 55555556667899999999999999
Q ss_pred cccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhcCchh
Q 001411 358 VLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGGEY 435 (1082)
Q Consensus 358 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 435 (1082)
||++|++||||||||-|-|...+.+++.++.+. .|+|||+|||++.++.. |||+.||++|+++..-++ ..
T Consensus 155 Lyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~--~~------ 226 (501)
T COG3845 155 LYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDP--VA------ 226 (501)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecC--CC------
Confidence 999999999999999999999999999999885 58999999999999876 899999999998643210 00
Q ss_pred HHHHHhhhccccCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccCCCCCCCchhHHHHHHHhcchhHHHHHH
Q 001411 436 AALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLG 515 (1082)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (1082)
+ ... . .+.+
T Consensus 227 --------------------------~--------------~t~---~-------------ela~--------------- 235 (501)
T COG3845 227 --------------------------E--------------TTE---E-------------ELAE--------------- 235 (501)
T ss_pred --------------------------C--------------CCH---H-------------HHHH---------------
Confidence 0 000 0 0000
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 516 SVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSA 595 (1082)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 595 (1082)
++
T Consensus 236 --------------------lM---------------------------------------------------------- 237 (501)
T COG3845 236 --------------------LM---------------------------------------------------------- 237 (501)
T ss_pred --------------------Hh----------------------------------------------------------
Confidence 00
Q ss_pred HHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 596 ILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAE 675 (1082)
Q Consensus 596 ~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~ 675 (1082)
.|
T Consensus 238 ---------------vG--------------------------------------------------------------- 239 (501)
T COG3845 238 ---------------VG--------------------------------------------------------------- 239 (501)
T ss_pred ---------------cC---------------------------------------------------------------
Confidence 00
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 676 QLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYAL 755 (1082)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (1082)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccccccE
Q 001411 756 GLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNI 835 (1082)
Q Consensus 756 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I 835 (1082)
... .......+. .|-..-+
T Consensus 240 -----------~~v-------------------------------------------~~~~~~~~~-------~pg~~vL 258 (501)
T COG3845 240 -----------REV-------------------------------------------VLRVVKPPS-------TPGEVVL 258 (501)
T ss_pred -----------Ccc-------------------------------------------ccccccCCC-------CCCCeEE
Confidence 000 000000000 1112248
Q ss_pred EEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccC-CCCCHHHHhc-ce
Q 001411 836 ELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDI-RTLNLRSLRR-KI 913 (1082)
Q Consensus 836 ~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di-~~i~~~~lR~-~i 913 (1082)
+++|++..=+ + +.+.+++|||+|++||++||.|-.|-|-|.|+.+|.|+..|.+|+|.++|.|+ ...+...+|+ .+
T Consensus 259 ~V~~L~v~~~-~-~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~r~~G~ 336 (501)
T COG3845 259 EVEDLSVKDR-R-GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRERRRLGL 336 (501)
T ss_pred EEeeeEeecC-C-CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHHHhcCC
Confidence 9999998643 2 34689999999999999999999999999999999999999999999999997 6777777654 69
Q ss_pred EEEcccCc----cccccHHHHhccCCCCC---------CHHHHHHHHHHhcHHHHHhhC---cccccccccCCCCCCChh
Q 001411 914 GLVQQEPA----LFSTTIYENIKYGNEDA---------SEIELMKATKAANAHGFISRM---PEGYQSHVGDRGVQLSGG 977 (1082)
Q Consensus 914 ~~VpQdp~----Lf~gTIreNl~~~~~~~---------~d~ei~~al~~a~l~~~i~~l---p~gldt~v~e~G~~LSgG 977 (1082)
+|||.|.+ ..+-|+.||+.++..+. +-.++.+. ..+.++++ +.+.+++ ..+||||
T Consensus 337 ~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~-----a~~li~~fdVr~~~~~~~----a~~LSGG 407 (501)
T COG3845 337 AYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKF-----ARELIEEFDVRAPSPDAP----ARSLSGG 407 (501)
T ss_pred ccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHH-----HHHHHHHcCccCCCCCcc----hhhcCCc
Confidence 99999985 56779999997753221 11233222 22334332 2233333 3579999
Q ss_pred HHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecCh
Q 001411 978 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSH 1055 (1082)
Q Consensus 978 QrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~ 1055 (1082)
+.||+-+||-|.++|++||..+||.+||..+.+.|++.|.+.. +|+.|++||-+|+.+.. ||||.||.+|+++...+|
T Consensus 408 NqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~~~~~ 487 (501)
T COG3845 408 NQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVGIVPP 487 (501)
T ss_pred ceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceeccccc
Confidence 9999999999999999999999999999999999999999876 58999999999999965 999999999999988877
Q ss_pred HH
Q 001411 1056 EQ 1057 (1082)
Q Consensus 1056 ~e 1057 (1082)
++
T Consensus 488 ~~ 489 (501)
T COG3845 488 EE 489 (501)
T ss_pred cc
Confidence 66
No 98
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.4e-60 Score=628.70 Aligned_cols=433 Identities=18% Similarity=0.231 Sum_probs=337.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 001411 5 HALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEA 84 (1082)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 84 (1082)
.++..+..+++.++++++++|.++++++.++.+++++..++.+..++..+......+...+.+.|+++|+.+||+|++++
T Consensus 1005 ~~~~~~~~~i~~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~ 1084 (1490)
T TIGR01271 1005 DFIQLTLIVLGAIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQS 1084 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcH
Confidence 44555566667777777777766554333333333334444444455555556666778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHH
Q 001411 85 KAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAW--ALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAA 162 (1082)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~ 162 (1082)
.+.+++.+..+...+..........+......++..+.. +++++++. ..++.|.+..++.+.+....++..+.
T Consensus 1085 ~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~-----~~~~~g~~g~~l~~~~~l~~~l~~l~ 1159 (1490)
T TIGR01271 1085 YFETLFHKALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGT-----NQDGEGEVGIILTLAMNILSTLQWAV 1159 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCccHHHHHHHHHHHHHHHHHHHH
Confidence 999999988775544333322222222222222111111 11122222 22344443333333444445677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC------------CCCCC---CCCCcEEEEEEEEECCCCCCcccccee
Q 001411 163 PNLAAIAKGKAAAANIISIIKENSHSSERPGDD------------GITLP---KLAGQIEFSEVCFAYPSRPHMVFENLN 227 (1082)
Q Consensus 163 ~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~------------~~~~~---~~~~~i~~~~v~~~y~~~~~~~l~~i~ 227 (1082)
..+..+..+..|.+|+.++++.+++........ ...++ +..+.|+|+||+|+|++...++|+|+|
T Consensus 1160 ~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is 1239 (1490)
T TIGR01271 1160 NSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLS 1239 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccE
Confidence 888899999999999999997654422110000 00001 224689999999999765556999999
Q ss_pred EEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCC
Q 001411 228 FSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKED 307 (1082)
Q Consensus 228 l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~ 307 (1082)
|+|+|||++||||+||||||||+++|+|+++ ++|+|.+||.|+++++.+.+|++|+||||+|.||+||||+||.... .
T Consensus 1240 ~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~ 1317 (1490)
T TIGR01271 1240 FSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-Q 1317 (1490)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-C
Confidence 9999999999999999999999999999997 7999999999999999999999999999999999999999997543 4
Q ss_pred CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHH
Q 001411 308 ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALE 387 (1082)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~ 387 (1082)
.++++++++++.+++++++.++|+|+||.+||+|.+||||||||++|||||+++|+|||||||||+||+++++.|++.|+
T Consensus 1318 ~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~ 1397 (1490)
T TIGR01271 1318 WSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLK 1397 (1490)
T ss_pred CCHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHhhhc
Q 001411 388 KIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQSS 444 (1082)
Q Consensus 388 ~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 444 (1082)
+..+++|+|+||||++++..+|+|++|++|+|++.|+|++|+++++.|+++++....
T Consensus 1398 ~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1398 QSFSNCTVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNETSLFKQAMSAADR 1454 (1490)
T ss_pred HHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcCCcHHHHHHHHhCh
Confidence 988899999999999999999999999999999999999999888999999876543
No 99
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=6.6e-60 Score=572.23 Aligned_cols=407 Identities=18% Similarity=0.190 Sum_probs=335.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 001411 5 HALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEA 84 (1082)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 84 (1082)
.++..+..+++.++++++++|.+++++++++|+.+++..+..++.++...+.++..++.++.+.|.+.|++++|+|+.++
T Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~ 211 (555)
T TIGR01194 132 PIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRR 211 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHH
Confidence 44555666777788889999999999988888888777777777777788888888999999999999999999999954
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHH
Q 001411 85 --KAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAA 162 (1082)
Q Consensus 85 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~ 162 (1082)
...+++.+..++..+...+..........+..++..+...+++++|++. +.+|+|.+++++.+......|+..+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~ 288 (555)
T TIGR01194 212 LSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLV 288 (555)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567788777777776665554444333333333333334444555443 68999998888777777778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCC---CCCCCC---CCCCCCCcEEEEEEEEECCCC---CCccccceeEEEeCC
Q 001411 163 PNLAAIAKGKAAAANIISIIKENSHSSER---PGDDGI---TLPKLAGQIEFSEVCFAYPSR---PHMVFENLNFSVDAG 233 (1082)
Q Consensus 163 ~~~~~~~~~~~a~~ri~~~l~~~~~~~~~---~~~~~~---~~~~~~~~i~~~~v~~~y~~~---~~~~l~~i~l~i~~g 233 (1082)
..+..++++..+++|+.++++.+++.+.. +..... ......+.|+++||+|+|++. ..++|+|+||++++|
T Consensus 289 ~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G 368 (555)
T TIGR01194 289 SALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQG 368 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCC
Confidence 99999999999999999998532111100 000000 111223579999999999753 235999999999999
Q ss_pred CEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHH
Q 001411 234 KTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRV 313 (1082)
Q Consensus 234 ~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~ 313 (1082)
|+++|+||||||||||+++|+|+++|++|+|.+||.++++++..++|++++||+|++++|++|+++|+ .++.+++++
T Consensus 369 ~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~ 445 (555)
T TIGR01194 369 DIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNA 445 (555)
T ss_pred cEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999995 355678899
Q ss_pred HHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHH-HH-cC
Q 001411 314 IEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALE-KI-MS 391 (1082)
Q Consensus 314 ~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~-~~-~~ 391 (1082)
.++++.+++++++..+|+|++|. .+||||||||++||||++++|+|+|||||||+||+++++.+.+.+. .+ .+
T Consensus 446 ~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~ 520 (555)
T TIGR01194 446 QQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQ 520 (555)
T ss_pred HHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999994 6899999999999999999999999999999999999999988764 34 45
Q ss_pred CCeEEEEccCccccccCCEEEEEeCCEEEEe
Q 001411 392 NRTTIVVAHRLSTVRDVDTIMVLKNGQVVES 422 (1082)
Q Consensus 392 ~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~ 422 (1082)
++|+|+||||++.++.||+|++|++|++++.
T Consensus 521 ~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 521 GKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred CCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 8999999999999999999999999999864
No 100
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7e-56 Score=551.58 Aligned_cols=494 Identities=22% Similarity=0.297 Sum_probs=365.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHH
Q 001411 558 IFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIV 637 (1082)
Q Consensus 558 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~~~~ 637 (1082)
..+...++..++.--..+...+.+.++-.-+-..+|+|.++..-.-- .+.+.|+++|-++.|++.+++.... +..+.
T Consensus 247 ~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~--~~~t~G~ivNlms~D~~ri~~~~~~-~h~~w 323 (1381)
T KOG0054|consen 247 LLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAIYRKALRLSNSAR--GETTVGEIVNLMSVDAQRLSDAACF-LHLLW 323 (1381)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHhhhcCchhhc--cCCCcchhhhhhhhhHHHHHHHHHH-HHHHH
Confidence 33333334443333334445666677777777777888888766532 3578999999999999999987653 33333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHHHHH
Q 001411 638 QNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRIS 717 (1082)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~ 717 (1082)
...+.++.++.+++..--.-+++.++++.+++.+-....+..+++..+......+-.....|.++|+++||.|+||+.|.
T Consensus 324 ~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~ 403 (1381)
T KOG0054|consen 324 SAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFL 403 (1381)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHH
Confidence 34444444444333221111222222222233333334444444444555555556688999999999999999999999
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001411 718 IQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVL-IKQKGSNFGDIMKSFMVLIITALAVAETLALAP 796 (1082)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1082)
++..+.-++-.+.-.+.....++...+......+..++ .++... ...+..+....+.++......-.++...-....
T Consensus 404 ~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~--tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~ 481 (1381)
T KOG0054|consen 404 KKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVV--TFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVIS 481 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888776666655555555544443333333322222 222222 334455665666666666566666666667777
Q ss_pred HHHHHHHHHHHHHHhhcccccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCH
Q 001411 797 DIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGK 876 (1082)
Q Consensus 797 ~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGK 876 (1082)
.+.++..+++|+.+++..++..+.... ..+..+.+..|+++|.+|++.+....|.|+||||+|++|+.+||||++||||
T Consensus 482 ~~vqa~VS~~Ri~~fl~~~e~~~~~~~-~~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGK 560 (1381)
T KOG0054|consen 482 QLVQAKVSLKRLKEFLLSEELDPDSVE-RSPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGK 560 (1381)
T ss_pred HHHHHHHHHHHHHHHhcCcccCccccc-cCCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCH
Confidence 888889999999999875432221111 0122233456999999999975334469999999999999999999999999
Q ss_pred HHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHH
Q 001411 877 STVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFI 956 (1082)
Q Consensus 877 STL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i 956 (1082)
|||+++++|-.+..+|++.++|. ++||||+|.+|+|||||||.+|.| .+++.-.++++.|+|..-+
T Consensus 561 SSLL~AiLGEm~~~sG~v~v~gs-------------iaYv~Q~pWI~ngTvreNILFG~~-~d~~rY~~Vi~aC~L~~Dl 626 (1381)
T KOG0054|consen 561 SSLLSAILGEMPKLSGSVAVNGS-------------VAYVPQQPWIQNGTVRENILFGSP-YDEERYDKVIKACALKKDL 626 (1381)
T ss_pred HHHHHHHhcCcccccceEEEcCe-------------EEEeccccHhhCCcHHHhhhcCcc-ccHHHHHHHHHHccCHhHH
Confidence 99999999999999999999984 999999999999999999999764 6788889999999999999
Q ss_pred hhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHH-HHHHhcCCceEEEEecCchhh
Q 001411 957 SRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQE-ALDKLMEGRTTIMVAHRLSTI 1035 (1082)
Q Consensus 957 ~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~-~l~~~~~~~TvI~IaHrl~ti 1035 (1082)
+.||.|=.|.|||+|.||||||||||+||||++++++|.+||+|-|++|.++.+.|.+ .|+...+++|+|.|||.++.+
T Consensus 627 e~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L 706 (1381)
T KOG0054|consen 627 EILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFL 706 (1381)
T ss_pred hhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhh
Confidence 9999999999999999999999999999999999999999999999999999888766 465566899999999999999
Q ss_pred hccCEEEEEeCCEEEEecChHHHhhhccchHHHHHHH
Q 001411 1036 RNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRL 1072 (1082)
Q Consensus 1036 ~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~~~ 1072 (1082)
.+||+|+||++|+|+|.|+|+||++ .++.|.+|..+
T Consensus 707 ~~ad~Iivl~~G~I~~~Gty~el~~-~~~~~~~l~~~ 742 (1381)
T KOG0054|consen 707 PHADQIIVLKDGKIVESGTYEELLK-SGGDFAELAHE 742 (1381)
T ss_pred hhCCEEEEecCCeEecccCHHHHHh-cchhHHHHhhc
Confidence 9999999999999999999999997 67888888544
No 101
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=9.9e-56 Score=535.95 Aligned_cols=400 Identities=20% Similarity=0.221 Sum_probs=305.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcch
Q 001411 4 GHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGE 83 (1082)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e 83 (1082)
+.++..+..++++++++++++|.+++++++++|+.+++..++.++.++..++.++..++..+.+.|.++|+++++ ++.+
T Consensus 126 ~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~ 204 (547)
T PRK10522 126 PELVQGIILTLGSAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRE 204 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHH
Confidence 345566667777788889999999999999999988888888888888888888999999999999999999996 4333
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHH
Q 001411 84 ---AKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQ 160 (1082)
Q Consensus 84 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~ 160 (1082)
+.+.+++.+..++..+...+..........+..++..+...+++++++.. ..+ +.+.+..+.+..+....|+..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~pl~~ 281 (547)
T PRK10522 205 RAEYVFENEYEPDAQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSL-GWA--DTNVAATYSLTLLFLRTPLLS 281 (547)
T ss_pred HHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcC--ChHHHHHHHHHHHHHHHHHHH
Confidence 45677777777666665555444333322222222222222222333222 112 222222222222334468888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEc
Q 001411 161 AAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVG 240 (1082)
Q Consensus 161 ~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG 240 (1082)
+...+..+..+..+.+|+.++++.+++.+ ... ....+ ..+.++++||+|+|+++ .++|+|+||+++|||+++|+|
T Consensus 282 l~~~~~~~~~~~~a~~ri~~l~~~~~~~~-~~~--~~~~~-~~~~i~~~~v~f~y~~~-~~~l~~i~~~i~~G~~~aivG 356 (547)
T PRK10522 282 AVGALPTLLSAQVAFNKLNKLALAPYKAE-FPR--PQAFP-DWQTLELRNVTFAYQDN-GFSVGPINLTIKRGELLFLIG 356 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccc-ccc--ccccC-cCceEEEEEEEEEeCCC-CeEEecceEEEcCCCEEEEEC
Confidence 89999999999999999999875432211 111 11111 12479999999999853 359999999999999999999
Q ss_pred CCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHh
Q 001411 241 PSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAA 320 (1082)
Q Consensus 241 ~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~ 320 (1082)
|||||||||+++|+|+|+|++|+|.+||+++++++.+++|++|+||+|+|++|++|+++| + +..+++++.++++..
T Consensus 357 ~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~ 432 (547)
T PRK10522 357 GNGSGKSTLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERL 432 (547)
T ss_pred CCCCCHHHHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999999999 2 344566666666666
Q ss_pred chHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEE
Q 001411 321 NAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVV 398 (1082)
Q Consensus 321 ~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~v 398 (1082)
++.+++. .|+|. .+|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+.+.. +++|+|+|
T Consensus 433 ~l~~~~~-~~~~~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~i 506 (547)
T PRK10522 433 KMAHKLE-LEDGR-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAI 506 (547)
T ss_pred CCchhhh-ccccC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 5544443 23321 1478999999999999999999999999999999999999999999987653 47999999
Q ss_pred ccCccccccCCEEEEEeCCEEEEe
Q 001411 399 AHRLSTVRDVDTIMVLKNGQVVES 422 (1082)
Q Consensus 399 tH~~~~~~~~d~i~~l~~G~i~~~ 422 (1082)
|||++.++.||+|++|++|++++.
T Consensus 507 tH~~~~~~~~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 507 SHDDHYFIHADRLLEMRNGQLSEL 530 (547)
T ss_pred EechHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999876
No 102
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1.3e-52 Score=514.81 Aligned_cols=396 Identities=17% Similarity=0.165 Sum_probs=327.6
Q ss_pred HHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcc
Q 001411 4 GHALRYLSQFFVGFAVGFT-SVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVG 82 (1082)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~ 82 (1082)
..++..+..+++.++.++. ++|.+++++++.+|+.+++..++.+++.+...+.++..++..+...|.++|+++||+|+.
T Consensus 217 ~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~ 296 (659)
T TIGR00954 217 SNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQG 296 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCC
Confidence 3455666666766666665 899999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH-c----CCCChHHHHHHH-HH---H
Q 001411 83 EAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFC--AWALLLWYAGILVR-H----GDTNGGKAFTTI-IN---V 151 (1082)
Q Consensus 83 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~v~-~----~~l~~g~~~~~~-~~---~ 151 (1082)
|+.+.+++.+..++..+...+..+..+....+..++... ..++.++.|...+. . |.+|.|..+..+ .+ +
T Consensus 297 e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~ 376 (659)
T TIGR00954 297 NKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLL 376 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHH
Confidence 999999999999999999888888888777777666532 22233333443332 2 689988765532 22 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC-----C--CC-CC-------------CCCCCCCCCcEEEEE
Q 001411 152 IFSGFALGQAAPNLAAIAKGKAAAANIISIIKENSHSSE-----R--PG-DD-------------GITLPKLAGQIEFSE 210 (1082)
Q Consensus 152 ~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~-----~--~~-~~-------------~~~~~~~~~~i~~~~ 210 (1082)
.....|+..+...+..++++.++.+|+.++++.+++... + .. .. ........+.|+++|
T Consensus 377 ~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~n 456 (659)
T TIGR00954 377 LKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFEN 456 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEe
Confidence 334568888999999999999999999999975332110 0 00 00 000111234699999
Q ss_pred EEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCC
Q 001411 211 VCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEP 290 (1082)
Q Consensus 211 v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~ 290 (1082)
++|+|+++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+++ |++++||+|+|
T Consensus 457 v~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~ 524 (659)
T TIGR00954 457 IPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRP 524 (659)
T ss_pred eEEECCCC-CeeeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCC
Confidence 99999743 3599999999999999999999999999999999999999999999874 56799999999
Q ss_pred CcChhcHHHHHhcCC-------CCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCC
Q 001411 291 ALFATSIANNILLGK-------EDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPK 363 (1082)
Q Consensus 291 ~l~~~ti~~ni~~g~-------~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~ 363 (1082)
++|++|++|||.++. +..+++++.++++.+++++++++ |.|+||..+ .+.+||||||||++||||++++|+
T Consensus 525 ~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~ 602 (659)
T TIGR00954 525 YMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQ 602 (659)
T ss_pred CCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCC
Confidence 999999999999874 23456788999999999998887 999999876 567999999999999999999999
Q ss_pred eeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEe
Q 001411 364 ILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLK 415 (1082)
Q Consensus 364 illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~ 415 (1082)
++|||||||+||+++++.+.+.+++. ++|+|+||||++.++.||++++|+
T Consensus 603 illLDEpts~LD~~~~~~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~ 652 (659)
T TIGR00954 603 FAILDECTSAVSVDVEGYMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMD 652 (659)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEe
Confidence 99999999999999999999999774 799999999999999999999996
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.1e-54 Score=475.54 Aligned_cols=238 Identities=28% Similarity=0.499 Sum_probs=224.4
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcc
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 912 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 912 (1082)
|.|+|+||+++|+.. +.++|+|+||+|++||++||+|+||||||||+++|+|+++ .+|+|.|||+++.+++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 569999999999632 3569999999999999999999999999999999999998 78999999999999999999999
Q ss_pred eEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCC
Q 001411 913 IGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP 992 (1082)
Q Consensus 913 i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~ 992 (1082)
|+||||+|.+|++|+++|+++.. ..++++++++++.+++.+++.++|++||+.++++|.+||||||||+|||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYG-KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhcc-CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998643 35788999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHHHHH
Q 001411 993 SILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRL 1072 (1082)
Q Consensus 993 ~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~~~ 1072 (1082)
+||||||||++||+.+++.+++.|++.++++|+|+||||++++..||||+||++|+++++|+|++|++ ..+.|++++..
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~-~~~~~~~~~~~ 236 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLN-EKSHFKQAISP 236 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhh-CcHHHHHHHhh
Confidence 99999999999999999999999999888999999999999999999999999999999999999998 56899999876
Q ss_pred hh
Q 001411 1073 QQ 1074 (1082)
Q Consensus 1073 ~~ 1074 (1082)
..
T Consensus 237 ~~ 238 (275)
T cd03289 237 SD 238 (275)
T ss_pred cc
Confidence 54
No 104
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-51 Score=408.92 Aligned_cols=215 Identities=33% Similarity=0.564 Sum_probs=188.7
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCC-CCCHHHHhhhc
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLK-SLQLKWLREQM 283 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~-~~~~~~~~~~i 283 (1082)
-|+++|++++|++. .+|+|||+++++||.++|+||||||||||+++|.|+.+|++|+|.+||.++. ..+...+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 38999999999853 4999999999999999999999999999999999999999999999998774 33788899999
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCC---CC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 001411 284 GLVSQEPALFAT-SIANNILLGKED---AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 355 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~---~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lA 355 (1082)
|+|+|+..||+. |+.||+.++.-. .+ .++-.+.++++++.+..+..| .+||||||||||||
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAIA 148 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAIA 148 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHHH
Confidence 999999999988 999999987321 11 223334455666666666555 58999999999999
Q ss_pred HhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC-CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhcC
Q 001411 356 RAVLRNPKILLLDEATSALDAESELIVQRALEKIMS-NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 432 (1082)
Q Consensus 356 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 432 (1082)
|||..+|+++|+|||||||||+....+.+.++++.+ |.|.|+|||.+.+.+. ||||+.|++|+|+++|+++++..+.
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 999999999999999999999999999999999864 7899999999999987 7999999999999999999998764
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-51 Score=405.92 Aligned_cols=217 Identities=35% Similarity=0.570 Sum_probs=192.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCC-CCCHHHHhcc
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIR-TLNLRSLRRK 912 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~-~i~~~~lR~~ 912 (1082)
.|+++||+.+|. +..||+|||++|++||.++|+||||||||||+++|.++.+|++|+|.|||.++. +.+...+|++
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 489999999996 457999999999999999999999999999999999999999999999998764 3378899999
Q ss_pred eEEEcccCccccc-cHHHHhccCCC---CCCHH----HHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHH
Q 001411 913 IGLVQQEPALFST-TIYENIKYGNE---DASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 913 i~~VpQdp~Lf~g-TIreNl~~~~~---~~~d~----ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaL 984 (1082)
+|+|+|+..||+. |+.||+.++-- ..+.+ .-.+.|+++|+.+.....| .+||||||||+||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHH
Confidence 9999999999975 99999987521 12222 2334567777777766665 6899999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhc
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKE 1062 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~ 1062 (1082)
||||..+|+++++|||||+|||+.-..|.+.++++. .|.|+|+|||.+...++ ||||+.||+|+|+|.|+|+++..++
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 999999999999999999999999999999999986 58899999999999987 9999999999999999999999876
Q ss_pred cc
Q 001411 1063 NG 1064 (1082)
Q Consensus 1063 ~g 1064 (1082)
..
T Consensus 228 ~~ 229 (240)
T COG1126 228 KS 229 (240)
T ss_pred CC
Confidence 54
No 106
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-49 Score=446.88 Aligned_cols=227 Identities=30% Similarity=0.505 Sum_probs=201.0
Q ss_pred ccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCccCC-
Q 001411 829 TEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIR- 902 (1082)
Q Consensus 829 ~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~- 902 (1082)
|+..+.|+|+|++++|+. ...++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.|||+++.
T Consensus 75 ~~~~~~i~~~nls~~y~~-~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~ 153 (329)
T PRK14257 75 FNHANVFEIRNFNFWYMN-RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRS 153 (329)
T ss_pred CCcCceEEEEeeEEEecC-CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 567789999999999963 23579999999999999999999999999999999999997 57999999999997
Q ss_pred -CCCHHHHhcceEEEcccCccccccHHHHhccCCC--CCCHHHHH-----HHHHHhcHHHHHhhCcccccccccCCCCCC
Q 001411 903 -TLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNE--DASEIELM-----KATKAANAHGFISRMPEGYQSHVGDRGVQL 974 (1082)
Q Consensus 903 -~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~~~d~ei~-----~al~~a~l~~~i~~lp~gldt~v~e~G~~L 974 (1082)
++++..+|++++||||+|.+|++|+++||+++.. ..++++.+ ++++.+++ ++++++.+++.|.+|
T Consensus 154 ~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L-------~~~l~~~~~~~~~~L 226 (329)
T PRK14257 154 KKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAAL-------WDEVKDDLDKAGNAL 226 (329)
T ss_pred cccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCC-------cchhhhhhhCCcccC
Confidence 4566789999999999999999999999996421 24455543 34455543 445678899999999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 001411 975 SGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 975 SgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1053 (1082)
|||||||+|||||++++|+|||||||||+||+++.+.+++.|++.++++|+|+|||+++++.+ ||||+||++|+|+|.|
T Consensus 227 SgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g 306 (329)
T PRK14257 227 SGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAG 306 (329)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999998889999999999999987 9999999999999999
Q ss_pred ChHHHhhhcc
Q 001411 1054 SHEQLLRKEN 1063 (1082)
Q Consensus 1054 ~~~eLl~~~~ 1063 (1082)
+|+++...+.
T Consensus 307 ~~~~l~~~~~ 316 (329)
T PRK14257 307 ETKTIFIHPK 316 (329)
T ss_pred CHHHHhcCCC
Confidence 9999987544
No 107
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.4e-49 Score=439.86 Aligned_cols=199 Identities=29% Similarity=0.389 Sum_probs=165.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
-|.|+||+|.|++. ..++++++|-|.++++||+|||||+|||||++++.+...|+.|.|.-.-. .++
T Consensus 389 vi~~~nv~F~y~~~--~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H-----------~~~ 455 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDN--PMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH-----------NKL 455 (614)
T ss_pred eEEEeccccCCCCc--chhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc-----------ccc
Confidence 49999999999743 36899999999999999999999999999999999999999999865432 234
Q ss_pred EEEccc---CccccccHHHHhccCCCC-CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHc
Q 001411 914 GLVQQE---PALFSTTIYENIKYGNED-ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAIL 989 (1082)
Q Consensus 914 ~~VpQd---p~Lf~gTIreNl~~~~~~-~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL 989 (1082)
++.-|. -..++.|.-+++.+..++ ...+++...+.+.|+..-.+ +.++ .+||+|||.|++.||.++
T Consensus 456 ~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q------~~p~----~~LS~Gqr~rVlFa~l~~ 525 (614)
T KOG0927|consen 456 PRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQ------VVPM----SQLSDGQRRRVLFARLAV 525 (614)
T ss_pred hhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCcccc------ccch----hhcccccchhHHHHHHHh
Confidence 444443 345678888999877664 66778888888988864333 2333 579999999999999999
Q ss_pred cCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEe-cChHH
Q 001411 990 KNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEI-GSHEQ 1057 (1082)
Q Consensus 990 ~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~-G~~~e 1057 (1082)
+.|.||||||||++||.+|-..+.++|.++- -+||+|||+...|.. +++|.+.++|.+... |....
T Consensus 526 kqP~lLlLDEPtnhLDi~tid~laeaiNe~~--Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~~ 593 (614)
T KOG0927|consen 526 KQPHLLLLDEPTNHLDIETIDALAEAINEFP--GGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIEI 593 (614)
T ss_pred cCCcEEEecCCCcCCCchhHHHHHHHHhccC--CceeeeechhhHHHHHHHHhHhhccCceeecCccHHH
Confidence 9999999999999999999999999998863 489999999999976 999999999988764 55433
No 108
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-49 Score=412.69 Aligned_cols=226 Identities=37% Similarity=0.599 Sum_probs=193.8
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCC---HHHH
Q 001411 835 IELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN---LRSL 909 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---~~~l 909 (1082)
|+|++|++.|+... ..++|+||||+|++||+.||+|+||||||||++++.++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 89999999998521 246999999999999999999999999999999999999999999999998888776 5667
Q ss_pred hcceEEEcccCcccc-ccHHHHhccCCC--CCCHHH----HHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 910 RRKIGLVQQEPALFS-TTIYENIKYGNE--DASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 910 R~~i~~VpQdp~Lf~-gTIreNl~~~~~--~~~d~e----i~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
|++||+|+|++.|++ -|+.+|+.|... ..+.+| +.+.|+.+|+.|.-.+ -..+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~-----------yP~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADR-----------YPAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhcc-----------CchhcCcchhhHH
Confidence 899999999999997 799999998632 233444 4455566666555444 3478999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHh
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
+|||||..+|+||+.|||||+|||+|-+.|.+.|++.- -|-|+++|||-++.+++ ||||.||++|+|+|.|+-.++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999999864 37899999999999987 9999999999999999999999
Q ss_pred hhccch-HHHHHH
Q 001411 1060 RKENGI-YKQLIR 1071 (1082)
Q Consensus 1060 ~~~~g~-f~~l~~ 1071 (1082)
.++... =++++.
T Consensus 231 ~~Pk~~~t~~fi~ 243 (339)
T COG1135 231 ANPKHAITQEFIG 243 (339)
T ss_pred cCcchHHHHHHHH
Confidence 876443 344443
No 109
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.3e-48 Score=427.49 Aligned_cols=236 Identities=27% Similarity=0.479 Sum_probs=218.9
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhc
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 283 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 283 (1082)
+.|+++|++++|++...++|+|+||+|++||+++|+|+||||||||+++|.|+++ ++|+|.+||.++..++...+|+.|
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 3589999999997544459999999999999999999999999999999999998 799999999999989999999999
Q ss_pred eEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCC
Q 001411 284 GLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPK 363 (1082)
Q Consensus 284 ~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~ 363 (1082)
+||||+|++|++|+++|+....+ .+.++++++++.+++.+++.++|++++|.++++|.+||||||||++||||++++|+
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~ 158 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGK-WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAK 158 (275)
T ss_pred EEECCCcccchhhHHHHhhhccC-CCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999964322 35678999999999999999999999999999999999999999999999999999
Q ss_pred eeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHHHh
Q 001411 364 ILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNL 441 (1082)
Q Consensus 364 illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 441 (1082)
|+||||||++||+.+.+.+.+.|++..+++|+|+||||++.+..||+|++|++|++++.|+++++++..+.|++++..
T Consensus 159 illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~ 236 (275)
T cd03289 159 ILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISP 236 (275)
T ss_pred EEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhh
Confidence 999999999999999999999999877789999999999999889999999999999999999999977777777653
No 110
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-49 Score=399.02 Aligned_cols=214 Identities=33% Similarity=0.580 Sum_probs=191.2
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
|+|+|||+.|.+ ..+++|+||+|++||+++++|||||||||++|+|.|+++|++|+|++||+++++++...+|++|||
T Consensus 2 I~~~nvsk~y~~--~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGN--KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCC--ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 789999999984 349999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCcChh-cHHHHHhcCCCCC--C----HHHHHHHHHHhchH--HHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 286 VSQEPALFAT-SIANNILLGKEDA--S----MDRVIEAAKAANAH--SFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 286 v~Q~~~l~~~-ti~~ni~~g~~~~--~----~~~~~~~~~~~~~~--~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
|-|+.-||+. ||.|||++-..-. + .+++.+.+++.+++ ++..+.| .+|||||+|||.+||
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv~R 148 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHHHH
Confidence 9999999987 9999998753211 2 23455666666664 3555665 489999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccc-ccCCEEEEEeCCEEEEecCchhhhhcC
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTV-RDVDTIMVLKNGQVVESGTHVDLISKG 432 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~~ 432 (1082)
||+.+|+|+|+|||++||||-++..+++.+.++.+ ++|+|+|||++++. +.+|||.+|++|+++..++|++++++.
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 99999999999999999999999999999988754 79999999999976 569999999999999999999999874
No 111
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.6e-49 Score=387.49 Aligned_cols=220 Identities=33% Similarity=0.560 Sum_probs=199.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCc-----cEEEECCccCCC--CCH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPIS-----GTVLIDGYDIRT--LNL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~-----G~I~idG~di~~--i~~ 906 (1082)
.++++|+++.|. +..+|+|||+.|++++.+|++|||||||||++++|.|+.+... |+|.+||.||-+ ++.
T Consensus 7 ~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 7 AIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred eeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 589999999996 4579999999999999999999999999999999999999875 999999999976 578
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCC------CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNE------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~------~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
-.||+++|+|+|.|--|+.||.||+.||-. ..-|+-++++|+.|.+|+.+.. .+.+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHHH
Confidence 899999999999999999999999999831 1224558889999999998864 345567789999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHh
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
||||||||.-+|+|||||||||+|||.+-..|.+.|.++.++-|+++|||.+.-... +|+...|-.|+++|+|+-+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999889999999999988755 9999999999999999999998
Q ss_pred hhcc
Q 001411 1060 RKEN 1063 (1082)
Q Consensus 1060 ~~~~ 1063 (1082)
.++.
T Consensus 237 ~~P~ 240 (253)
T COG1117 237 TNPK 240 (253)
T ss_pred cCcc
Confidence 7553
No 112
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-48 Score=395.35 Aligned_cols=219 Identities=36% Similarity=0.586 Sum_probs=195.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+|+|||++|. +..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 79999999996 557999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccCcccc-ccHHHHhccCCC---CCCHH----HHHHHHHHhcHH--HHHhhCcccccccccCCCCCCChhHHHHHHH
Q 001411 915 LVQQEPALFS-TTIYENIKYGNE---DASEI----ELMKATKAANAH--GFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 915 ~VpQdp~Lf~-gTIreNl~~~~~---~~~d~----ei~~al~~a~l~--~~i~~lp~gldt~v~e~G~~LSgGQrQrlaL 984 (1082)
||-|..-||+ -||.+||.. -| ..+.+ .+.+.++.+++. +|..+.| ..|||||+||+.+
T Consensus 79 YviQqigLFPh~Tv~eNIa~-VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv 146 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIAT-VPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGV 146 (309)
T ss_pred hhhhhcccCCCccHHHHHHh-hhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHH
Confidence 9999999997 599999976 23 23443 445556666664 3555555 6799999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHHhhh
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
||||..+|+||+||||.++|||.|...+|+-+.+..+ ++|+|+|||++++.. -+|||+||++|+|+.+|+|++++++
T Consensus 147 ~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~ 226 (309)
T COG1125 147 ARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILAN 226 (309)
T ss_pred HHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999988754 799999999999875 5999999999999999999999988
Q ss_pred ccchHHH
Q 001411 1062 ENGIYKQ 1068 (1082)
Q Consensus 1062 ~~g~f~~ 1068 (1082)
+...|-+
T Consensus 227 Pan~FV~ 233 (309)
T COG1125 227 PANDFVE 233 (309)
T ss_pred ccHHHHH
Confidence 7766644
No 113
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-48 Score=407.65 Aligned_cols=216 Identities=35% Similarity=0.569 Sum_probs=191.6
Q ss_pred EEEEEEEEECCCC---CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHH---HH
Q 001411 206 IEFSEVCFAYPSR---PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK---WL 279 (1082)
Q Consensus 206 i~~~~v~~~y~~~---~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~ 279 (1082)
|++++||+.|+.. ...+|+|+||+|++||+.+|+|+||+|||||++++.++-.|++|+|.+||.++..++.. ..
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999763 23499999999999999999999999999999999999999999999999999877654 56
Q ss_pred hhhceEEccCCCcCh-hcHHHHHhcCCCCC------CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHH
Q 001411 280 REQMGLVSQEPALFA-TSIANNILLGKEDA------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRI 352 (1082)
Q Consensus 280 ~~~i~~v~Q~~~l~~-~ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri 352 (1082)
|++||+++|++.|++ .||.+|++|..+-+ -.+++.+.++.+++.+..++.| .+|||||||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 789999999999998 59999999975422 1346667777777766666555 58999999999
Q ss_pred HHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhh
Q 001411 353 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 353 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
+|||||..+|+|||.|||||||||+|.+.|.+.|++..+ +-|+++|||.++.++. ||||.||++|+++|+|+..++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 999999999999999999999999999999999998743 7899999999999987 9999999999999999999998
Q ss_pred hcC
Q 001411 430 SKG 432 (1082)
Q Consensus 430 ~~~ 432 (1082)
.+.
T Consensus 231 ~~P 233 (339)
T COG1135 231 ANP 233 (339)
T ss_pred cCc
Confidence 764
No 114
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-48 Score=384.97 Aligned_cols=220 Identities=30% Similarity=0.486 Sum_probs=197.5
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCC-----cEEEECCeeCCC--CCH
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTS-----GKILLDGHDLKS--LQL 276 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~-----G~i~~~g~~~~~--~~~ 276 (1082)
..++++|+++.|++ +.+|+|||++|++++++|++|||||||||||+++.++.+..+ |+|.++|+++.+ ++.
T Consensus 6 ~~~~~~~l~~yYg~--~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGD--KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECc--hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 45899999999984 349999999999999999999999999999999999998875 999999999975 579
Q ss_pred HHHhhhceEEccCCCcChhcHHHHHhcCCCCC------CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 277 KWLREQMGLVSQEPALFATSIANNILLGKEDA------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 277 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
..+|++||+|+|.|.-|+.||+||+++|..-. -++.+.++++.+.+++.+.. .+.+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHHH
Confidence 99999999999999999999999999984311 13557888899988877643 345677889999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++|||||.-+|+|||||||||||||.+...|++.|.+++++-|+|+|||+++...+ +|+...+..|+++|.|+.+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999989999999999998876 6999999999999999999887
Q ss_pred hcC
Q 001411 430 SKG 432 (1082)
Q Consensus 430 ~~~ 432 (1082)
.+.
T Consensus 237 ~~P 239 (253)
T COG1117 237 TNP 239 (253)
T ss_pred cCc
Confidence 653
No 115
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=5.4e-47 Score=414.94 Aligned_cols=240 Identities=32% Similarity=0.574 Sum_probs=222.8
Q ss_pred ccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHh
Q 001411 831 IKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLR 910 (1082)
Q Consensus 831 ~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR 910 (1082)
..|.|+++|++++|+.. ..++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 46789999999999732 24699999999999999999999999999999999999999999999999999999988999
Q ss_pred cceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHcc
Q 001411 911 RKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILK 990 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~ 990 (1082)
++++|++|+|.+|++|+++|+.+.. ...+++++++++.+++.+++..+|.|+++.+++.+.+||+|||||++||||+++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPEC-KCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCC-CCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999998742 234567888899999999999999999999999999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHHH
Q 001411 991 NPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLI 1070 (1082)
Q Consensus 991 ~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~ 1070 (1082)
+|++|||||||++||+++.+.+.+.+++..+++|+|++||+++.+..||||++|++|++++.|+++++.+..++.|+.++
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 253 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLV 253 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHH
Confidence 99999999999999999999999999987678999999999999988999999999999999999999987778899987
Q ss_pred HH
Q 001411 1071 RL 1072 (1082)
Q Consensus 1071 ~~ 1072 (1082)
..
T Consensus 254 ~~ 255 (257)
T cd03288 254 RT 255 (257)
T ss_pred hc
Confidence 64
No 116
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=5.1e-47 Score=411.10 Aligned_cols=235 Identities=47% Similarity=0.798 Sum_probs=217.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 5789999999632 357999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 001411 915 LVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSI 994 (1082)
Q Consensus 915 ~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~I 994 (1082)
|+||++.+|+.|+++|+.++.+..+.+++.++++..++.+++..+|.|+++.....+.+||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999886544556677788888899999999999999999889999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHHHH
Q 001411 995 LLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIR 1071 (1082)
Q Consensus 995 LlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~~ 1071 (1082)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++++ ..+.|+.+++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~-~~~~~~~~~~ 235 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLA-ENGLYAYLYQ 235 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHh-ccChHHHHHh
Confidence 999999999999999999999999877899999999999998899999999999999999999997 4788888775
No 117
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-45 Score=447.01 Aligned_cols=198 Identities=27% Similarity=0.437 Sum_probs=168.2
Q ss_pred cccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC--CccEEEECCccCCCCCHHHHhcceEEEcccCc-ccccc
Q 001411 850 ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP--ISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPA-LFSTT 926 (1082)
Q Consensus 850 ~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p--~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~-Lf~gT 926 (1082)
+..|+|||=-++||.-.|++|+||||||||+++|.+=.+- .+|+|+|||.+..+ +..++.+|||.|++. +=.-|
T Consensus 804 ~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~~T 880 (1391)
T KOG0065|consen 804 RQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPELT 880 (1391)
T ss_pred eEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcccc
Confidence 4689999999999999999999999999999999987543 47999999998765 789999999999774 55679
Q ss_pred HHHHhccCC-----CCCCHHH----HHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCC-CEEE
Q 001411 927 IYENIKYGN-----EDASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP-SILL 996 (1082)
Q Consensus 927 IreNl~~~~-----~~~~d~e----i~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~-~ILl 996 (1082)
|||-|.+.. .+.+++| +.++.+..++.++ =|..||..|..||..||.||.||=-|+.|| .||.
T Consensus 881 VrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~-------~daiVG~~G~GLs~eQRKrLTIgVELvA~P~~ilF 953 (1391)
T KOG0065|consen 881 VRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEY-------ADALVGLPGSGLSTEQRKRLTIGVELVANPSSILF 953 (1391)
T ss_pred hHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhh-------hhhhccCCCCCCCHHHhceeeEEEEEecCCceeEE
Confidence 999997752 2344444 4455555555444 356799999999999999999999999999 9999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhh--hccCEEEEEeC-CEEEEecChHH
Q 001411 997 LDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTI--RNADKIAVLQQ-GKVAEIGSHEQ 1057 (1082)
Q Consensus 997 LDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti--~~~DrI~Vl~~-G~ive~G~~~e 1057 (1082)
||||||+||+.+...|.+.+|+.. .|+||++.=|.++.. +.+|+++.|+. |+.|-+|++.+
T Consensus 954 LDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 954 LDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred ecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 999999999999999999999976 699999999999874 67999999974 79999988654
No 118
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-46 Score=420.49 Aligned_cols=222 Identities=31% Similarity=0.516 Sum_probs=194.3
Q ss_pred CCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC-----CCCcEEEECCeeCCC--CC
Q 001411 203 AGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQ 275 (1082)
Q Consensus 203 ~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~ 275 (1082)
.+.|+++|++++|++...++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.+||+++.. .+
T Consensus 78 ~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~ 157 (329)
T PRK14257 78 ANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKIS 157 (329)
T ss_pred CceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 35799999999997544469999999999999999999999999999999999996 579999999999973 44
Q ss_pred HHHHhhhceEEccCCCcChhcHHHHHhcCCCC--CCHHH-----HHHHHHHhchHHHHhcCCCCccccccCCCCCCChHH
Q 001411 276 LKWLREQMGLVSQEPALFATSIANNILLGKED--ASMDR-----VIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQ 348 (1082)
Q Consensus 276 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~~~~~-----~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGq 348 (1082)
...+|+.++||||+||+|++|++|||.|+... .++++ +.++++.++ +++++++.++++|.+|||||
T Consensus 158 ~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~-------L~~~l~~~~~~~~~~LSgGq 230 (329)
T PRK14257 158 SLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAA-------LWDEVKDDLDKAGNALSGGQ 230 (329)
T ss_pred hHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcC-------CcchhhhhhhCCcccCCHHH
Confidence 56788999999999999999999999987432 22222 233444443 44556788999999999999
Q ss_pred HHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchh
Q 001411 349 KQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVD 427 (1082)
Q Consensus 349 kqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~ 427 (1082)
|||++||||++++|+||||||||++||+++.+.+.+.|+++.+++|+|+|||+++++.. ||+|++|++|++++.|++++
T Consensus 231 kqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~ 310 (329)
T PRK14257 231 QQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKT 310 (329)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998888999999999999877 99999999999999999999
Q ss_pred hhhc
Q 001411 428 LISK 431 (1082)
Q Consensus 428 l~~~ 431 (1082)
+...
T Consensus 311 l~~~ 314 (329)
T PRK14257 311 IFIH 314 (329)
T ss_pred HhcC
Confidence 8764
No 119
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4.8e-46 Score=403.53 Aligned_cols=234 Identities=50% Similarity=0.837 Sum_probs=214.4
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|++++|++...++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 47899999997533459999999999999999999999999999999999999999999999999887777788889999
Q ss_pred EccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCee
Q 001411 286 VSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL 365 (1082)
Q Consensus 286 v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~il 365 (1082)
++|++++|+.|++||+.++.+....+++.++++..++.+.++.+|.|+++..+..+.+||||||||++||||++.+|+++
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 99999999999999999876544456677777878888999999999999999999999999999999999999999999
Q ss_pred EEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHH
Q 001411 366 LLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALV 439 (1082)
Q Consensus 366 llDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 439 (1082)
||||||++||+.+...+.+.|.++.+++|+|++||+++.+..||++++|++|++++.|+++++.++.+.|..++
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~ 234 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAYLY 234 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHHHH
Confidence 99999999999999999999999877899999999999998899999999999999999999988877777654
No 120
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-45 Score=399.86 Aligned_cols=235 Identities=55% Similarity=0.884 Sum_probs=217.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 478999999962 246999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 001411 915 LVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSI 994 (1082)
Q Consensus 915 ~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~I 994 (1082)
|+||+|.+|++|+++|+.++....+++++.++++.+++.+.+..+|.|+++.+.....+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999886655667778888899999999999999999999999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHHHHH
Q 001411 995 LLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRL 1072 (1082)
Q Consensus 995 LlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~~~ 1072 (1082)
|||||||++||+++.+.+.+.|++..++.|+|++||+++.+..||++++|++|++++.|+++++.+ +.+.|+.++..
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~-~~~~~~~~~~~ 235 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLA-KGGLYAEMWKA 235 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh-cccHHHHHHhc
Confidence 999999999999999999999998766889999999999998899999999999999999999987 56778777653
No 121
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=4e-46 Score=392.15 Aligned_cols=214 Identities=34% Similarity=0.575 Sum_probs=191.3
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++|++|+|++ +++|+|+||++++||+++|+||||||||||+|+|+|+++|.+|+|.+||+++.+++.+++.+.+|
T Consensus 2 ~L~~~~ls~~y~~--~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYGG--KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEECC--eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 3789999999984 45999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCc-ChhcHHHHHhcCCCCC----------CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 001411 285 LVSQEPAL-FATSIANNILLGKEDA----------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 285 ~v~Q~~~l-~~~ti~~ni~~g~~~~----------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~ 353 (1082)
||||++.. |+-||+|-+.+|+-.. +.+.+.++++..++.++.++ .-..||||||||+.
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r-----------~~~~LSGGerQrv~ 148 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADR-----------PVDELSGGERQRVL 148 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcC-----------cccccChhHHHHHH
Confidence 99999754 5669999999996421 23357777888877766544 23579999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCcccc-ccCCEEEEEeCCEEEEecCchhhhh
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTV-RDVDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
|||||+++|+|++||||||+||...+..+++.++++. +++|+|+|+|+++.. ++||++++|++|+++.+|+++|++.
T Consensus 149 iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT 228 (258)
T COG1120 149 IARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLT 228 (258)
T ss_pred HHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcC
Confidence 9999999999999999999999999999999999986 369999999999875 6799999999999999999999886
Q ss_pred c
Q 001411 431 K 431 (1082)
Q Consensus 431 ~ 431 (1082)
.
T Consensus 229 ~ 229 (258)
T COG1120 229 E 229 (258)
T ss_pred H
Confidence 5
No 122
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.1e-45 Score=398.70 Aligned_cols=236 Identities=62% Similarity=1.015 Sum_probs=214.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+...+.++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997432357999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 001411 915 LVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSI 994 (1082)
Q Consensus 915 ~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~I 994 (1082)
|+||+|.+|+.|+++|+.++......+++.+.++..++.+++..+|.|+++.......+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999886555556677778888899999999999999999988899999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHHHH
Q 001411 995 LLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIR 1071 (1082)
Q Consensus 995 LlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l~~ 1071 (1082)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++.+ ..+.++.++.
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~-~~~~~~~~~~ 236 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMA-QKGVYAKLVK 236 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhh-cChhHHHHhh
Confidence 999999999999999999999998767899999999999998899999999999999999999987 4565665553
No 123
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-45 Score=398.33 Aligned_cols=233 Identities=56% Similarity=0.923 Sum_probs=213.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+.+ ..++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999632 236999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 001411 915 LVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSI 994 (1082)
Q Consensus 915 ~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~I 994 (1082)
|+||+|.+|+.|++||+.++....+..++.+.++..++.++++.+|.|+++..+....+||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999986555566677778888899999999999999999988999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHH
Q 001411 995 LLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQL 1069 (1082)
Q Consensus 995 LlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l 1069 (1082)
|||||||++||+.+.+.+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|+++++.. ..+.|+.+
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~-~~~~~~~~ 233 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLA-QGGVYAKL 233 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHH-cCcchhhh
Confidence 999999999999999999999999877899999999999998899999999999999999999987 45655543
No 124
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2e-45 Score=394.33 Aligned_cols=221 Identities=37% Similarity=0.641 Sum_probs=206.9
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcc
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 912 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 912 (1082)
|.|+++|++++|+.. +.++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 468999999999732 3479999999999999999999999999999999999999999999999999998888899999
Q ss_pred eEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCC
Q 001411 913 IGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP 992 (1082)
Q Consensus 913 i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~ 992 (1082)
++|+||+|.+|++|+++|+.+.. ..+.+++.++++..++.+++.++|.|+++.+++.+.+||+|||||++|||||+++|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~-~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFG-EYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCC-CCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998753 35677889999999999999999999999999999999999999999999999999
Q ss_pred CEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecCh
Q 001411 993 SILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSH 1055 (1082)
Q Consensus 993 ~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~ 1055 (1082)
++|||||||++||+.+.+.+.+.|++..++.|+|++||+++.+..||++++|++|++++.|++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 999999999999999999999999988778899999999999988999999999999998863
No 125
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.4e-46 Score=374.20 Aligned_cols=219 Identities=30% Similarity=0.550 Sum_probs=190.8
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHH---HHh
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK---WLR 280 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~ 280 (1082)
..|++++|+++|+++ .+++|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|+++.+++.+ .+|
T Consensus 7 ~~I~vr~v~~~fG~~--~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 7 PLIEVRGVTKSFGDR--VILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred ceEEEeeeeeecCCE--EEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 469999999999754 499999999999999999999999999999999999999999999999999888754 568
Q ss_pred hhceEEccCCCcChh-cHHHHHhcCCCCC---CHHH----HHHHHHHhchHHH-HhcCCCCccccccCCCCCCChHHHHH
Q 001411 281 EQMGLVSQEPALFAT-SIANNILLGKEDA---SMDR----VIEAAKAANAHSF-VEGLPDGYQTQVGEGGTQLSGGQKQR 351 (1082)
Q Consensus 281 ~~i~~v~Q~~~l~~~-ti~~ni~~g~~~~---~~~~----~~~~~~~~~~~~~-i~~lp~g~~t~~g~~g~~LSgGqkqr 351 (1082)
+++|+++|+..||+. ||+||+.|...+. +.+. +...++++++... .+.+| .+||||.+.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHHH
Confidence 899999999999988 9999999864322 2222 3334455555554 44555 5899999999
Q ss_pred HHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhh
Q 001411 352 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 428 (1082)
Q Consensus 352 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 428 (1082)
+|||||+..||+|+++|||||+|||.+...+.+.|+++++ +.|+|+|||+++.+.. ||||+++.+|+|+..|+++|+
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999988864 6899999999998876 799999999999999999999
Q ss_pred hhcCchh
Q 001411 429 ISKGGEY 435 (1082)
Q Consensus 429 ~~~~~~~ 435 (1082)
.+....|
T Consensus 234 ~~sd~P~ 240 (263)
T COG1127 234 LASDDPW 240 (263)
T ss_pred HhCCCHH
Confidence 9876544
No 126
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-45 Score=395.36 Aligned_cols=227 Identities=52% Similarity=0.892 Sum_probs=211.5
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcc
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 912 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 912 (1082)
|.|+++|++++|+. ..++++|+||+|++||+++|+|+||||||||+++|.|+++|.+|+|.+||.++...+...+|++
T Consensus 1 ~~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 46899999999962 2469999999999999999999999999999999999999999999999999988888889999
Q ss_pred eEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCC
Q 001411 913 IGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP 992 (1082)
Q Consensus 913 i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~ 992 (1082)
++|+||++.+|++|+++|+.++.+...++++.++++..++.++++.+|.|+++.++....+||||||||++|||||+++|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999865555667788888999999999999999999999889999999999999999999999
Q ss_pred CEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhh
Q 001411 993 SILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 993 ~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|+++++.++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999999999999999999999988678999999999999988999999999999999999888763
No 127
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-45 Score=403.89 Aligned_cols=213 Identities=36% Similarity=0.579 Sum_probs=194.0
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.|+++|+++.|++.. +++|+||+|++||+++|+|||||||||||++|+|+.+|++|+|.++|+++++++++. +.||
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 589999999997543 899999999999999999999999999999999999999999999999999998876 6799
Q ss_pred EEccCCCcChh-cHHHHHhcCCCCC------CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHh
Q 001411 285 LVSQEPALFAT-SIANNILLGKEDA------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 357 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARa 357 (1082)
+|+|++.||+. ||+|||.||.... -++++.++++..++.+.+++.|. +||||||||||||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHHHH
Confidence 99999999988 9999999986543 25678888988888888887774 899999999999999
Q ss_pred cccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhcC
Q 001411 358 VLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISKG 432 (1082)
Q Consensus 358 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 432 (1082)
|.++|+++|||||+|+||++.+..+...|+++.+ +.|+|+||||..++. .+|||.+|++|+|.+.|++.|+..+.
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 9999999999999999999999999988888754 579999999988765 58999999999999999999998763
No 128
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.1e-45 Score=354.54 Aligned_cols=210 Identities=33% Similarity=0.558 Sum_probs=188.8
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
+.+++|.|.|...+ -..+++|++||++||+||||||||||+++++|+..|.+|+|.++|+|....++.+ +-+++
T Consensus 2 l~L~~V~~~y~~~~----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~--RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGHLP----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAE--RPVSM 75 (231)
T ss_pred ccccceEEeeCcce----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCccc--CChhh
Confidence 56789999997433 3578999999999999999999999999999999999999999999998777654 56999
Q ss_pred EccCCCcChh-cHHHHHhcCCCCC------CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhc
Q 001411 286 VSQEPALFAT-SIANNILLGKEDA------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 358 (1082)
Q Consensus 286 v~Q~~~l~~~-ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal 358 (1082)
++||..||.. ||++||.+|.... ..+++..++..+++..+.+++|. +||||||||+||||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHHH
Confidence 9999999988 9999999996431 35678899999999999999996 8999999999999999
Q ss_pred ccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhcC
Q 001411 359 LRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 432 (1082)
Q Consensus 359 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 432 (1082)
.++.+|++||||+|+|||.-++.+...+.++. ++.|++||||+++.+.. +|+++++++|+|.++|+.+++....
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~ 221 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGK 221 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccC
Confidence 99999999999999999999999999998875 36799999999998865 8999999999999999999887654
No 129
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=5.9e-46 Score=360.02 Aligned_cols=207 Identities=34% Similarity=0.583 Sum_probs=187.5
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCC---HHHHhhh
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ---LKWLREQ 282 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~---~~~~~~~ 282 (1082)
|+|+||+++|++. .++|+|+||+|++||++-|+||||||||||+|+|.+...|+.|+|.++|+|+..+. ..-+|++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 7899999999876 56999999999999999999999999999999999999999999999999998764 5568999
Q ss_pred ceEEccCCCcChh-cHHHHHhcCCCC-----C-CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 001411 283 MGLVSQEPALFAT-SIANNILLGKED-----A-SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 355 (1082)
Q Consensus 283 i~~v~Q~~~l~~~-ti~~ni~~g~~~-----~-~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lA 355 (1082)
||+|+||..|... ||.||++|...- . -.+++.++++.+++.+....+|. .|||||+||++||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaIA 149 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAIA 149 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHHH
Confidence 9999999998766 999999986432 1 24578889999999998888885 8999999999999
Q ss_pred HhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCccccccC-CEEEEEeCCEEEEecC
Q 001411 356 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRDV-DTIMVLKNGQVVESGT 424 (1082)
Q Consensus 356 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~~-d~i~~l~~G~i~~~g~ 424 (1082)
||+..+|++||-||||.+|||+....|++.+.++. .|.||++.||+.+.+..+ -|++.+++|+++....
T Consensus 150 RAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 150 RAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 99999999999999999999999999999999885 489999999999999876 7899999999987543
No 130
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-45 Score=373.87 Aligned_cols=227 Identities=33% Similarity=0.524 Sum_probs=190.6
Q ss_pred cEEEEeEEEECCCCCC-cccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCC-CHHHHhc
Q 001411 834 NIELRNVSFKYPVRPD-ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL-NLRSLRR 911 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~-~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i-~~~~lR~ 911 (1082)
.++++|+++.|+.+.. .++|+||||+|.+||++||||+||||||||.++|.|+.+|++|+|.+||.+.... +.+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 4899999999974321 1599999999999999999999999999999999999999999999999876654 3446788
Q ss_pred ceEEEcccCc--ccc-ccHHHHhc----cCCCCCCHHHHHHHHHHhcHHH-HHhhCcccccccccCCCCCCChhHHHHHH
Q 001411 912 KIGLVQQEPA--LFS-TTIYENIK----YGNEDASEIELMKATKAANAHG-FISRMPEGYQSHVGDRGVQLSGGQKQRVA 983 (1082)
Q Consensus 912 ~i~~VpQdp~--Lf~-gTIreNl~----~~~~~~~d~ei~~al~~a~l~~-~i~~lp~gldt~v~e~G~~LSgGQrQrla 983 (1082)
.+-+|+|||. |=+ -||++-|. ...-+....+++++++.+++.+ |..+.| ..||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 9999999997 222 35555553 3111234556899999999865 444444 579999999999
Q ss_pred HHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCC--ceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 984 IARAILKNPSILLLDEATSALDTASENLIQEALDKLMEG--RTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 984 LARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~--~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|||||.-+|++||||||||+||....++|++.+.+..++ -|.|+|||++..+.. ||||+||++|+++|.++-.++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 999999999999999999999999999999999998764 499999999999987 99999999999999999999998
Q ss_pred hccchHHHHHH
Q 001411 1061 KENGIYKQLIR 1071 (1082)
Q Consensus 1061 ~~~g~f~~l~~ 1071 (1082)
.+...|.+.+-
T Consensus 232 ~~~h~ytr~Ll 242 (252)
T COG1124 232 HPSHPYTRELL 242 (252)
T ss_pred CCccHHHHHHH
Confidence 65666766554
No 131
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-45 Score=379.23 Aligned_cols=195 Identities=37% Similarity=0.568 Sum_probs=172.3
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++++++.|++ ..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.++..- ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 4889999999986 4599999999999999999999999999999999999999999999999887432 35799
Q ss_pred EEccCCCcChh-cHHHHHhcCCCCC------CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHh
Q 001411 285 LVSQEPALFAT-SIANNILLGKEDA------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 357 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARa 357 (1082)
||+|++.||+= ||+||+.+|.+.. ..+++.+.++.+++.++-+..|. +||||||||||||||
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiARA 144 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIARA 144 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHHH
Confidence 99999999997 9999999986542 23456677777777777777664 899999999999999
Q ss_pred cccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCC
Q 001411 358 VLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNG 417 (1082)
Q Consensus 358 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G 417 (1082)
|+.+|+||+||||++|||+.|+..+++.+.++.+ ++|+++|||+.++.- .+|||++|.++
T Consensus 145 L~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 145 LATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred HhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 9999999999999999999999999999988753 689999999999865 58999999983
No 132
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.7e-45 Score=401.79 Aligned_cols=194 Identities=27% Similarity=0.381 Sum_probs=162.2
Q ss_pred ccEEEEeEEEECCCCCCc-ccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhc
Q 001411 833 GNIELRNVSFKYPVRPDI-TIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRR 911 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~-~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~ 911 (1082)
..+++.+|+|.|+. +. +.++++++.++.-.++++||++|+||||+++++.+-.+|..|.+.+.+ |.
T Consensus 361 p~l~i~~V~f~y~p--~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~ 427 (582)
T KOG0062|consen 361 PNLRISYVAFEYTP--SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RL 427 (582)
T ss_pred CeeEEEeeeccCCC--cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cc
Confidence 46999999999973 43 789999999999999999999999999999999999999999998866 67
Q ss_pred ceEEEcccCccc-cccHH--HHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHH
Q 001411 912 KIGLVQQEPALF-STTIY--ENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAI 988 (1082)
Q Consensus 912 ~i~~VpQdp~Lf-~gTIr--eNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAl 988 (1082)
+|+|-.|.-+=| +-.+. +-+.-..|..+++|+++.|...|+..-+...+ -..||||||-|+++|-..
T Consensus 428 ri~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~s----------i~~LSGGQKsrvafA~~~ 497 (582)
T KOG0062|consen 428 RIKYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQS----------IASLSGGQKSRVAFAACT 497 (582)
T ss_pred eecchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhcc----------ccccCCcchhHHHHHHHh
Confidence 899999977643 22111 11111134558999999988887765443221 256999999999999999
Q ss_pred ccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEE
Q 001411 989 LKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAE 1051 (1082)
Q Consensus 989 L~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive 1051 (1082)
..+|.+|||||||..||.++-..+-++|+.+-. -||+|||+.+.+.. |+.++|.++|+|.-
T Consensus 498 ~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F~G--GVv~VSHd~~fi~~~c~E~Wvve~g~vt~ 559 (582)
T KOG0062|consen 498 WNNPHLLVLDEPTNHLDRDSLGALAKALKNFNG--GVVLVSHDEEFISSLCKELWVVEDGKVTP 559 (582)
T ss_pred cCCCcEEEecCCCccccHHHHHHHHHHHHhcCC--cEEEEECcHHHHhhcCceeEEEcCCcEEe
Confidence 999999999999999999999999999987633 69999999999976 99999999999986
No 133
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.8e-45 Score=412.03 Aligned_cols=226 Identities=35% Similarity=0.537 Sum_probs=192.4
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHH---Hh
Q 001411 835 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS---LR 910 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR 910 (1082)
|+++||+++|+... ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++..++.++ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996321 247999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cceEEEcccCcccc-ccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHH
Q 001411 911 RKIGLVQQEPALFS-TTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 983 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~-gTIreNl~~~~~--~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 983 (1082)
++|+||||++.+|+ .|+++|+.++.. ..+. +.+.++++.+++.++..+ ....||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~-----------~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDS-----------YPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHHH
Confidence 89999999999995 799999986421 1222 335566777776655433 33679999999999
Q ss_pred HHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 984 IARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 984 LARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|||||+.+|+|||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|+|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998753 7899999999999966 99999999999999999999986
Q ss_pred hccchH-HHHHH
Q 001411 1061 KENGIY-KQLIR 1071 (1082)
Q Consensus 1061 ~~~g~f-~~l~~ 1071 (1082)
.+...+ +.++.
T Consensus 231 ~p~~~~~~~~~~ 242 (343)
T TIGR02314 231 HPKTPLAQKFIR 242 (343)
T ss_pred CCCcHHHHHHHh
Confidence 554433 44443
No 134
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.2e-45 Score=386.63 Aligned_cols=213 Identities=37% Similarity=0.577 Sum_probs=192.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.++++|++|+|+ ++++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|++||.++.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 378999999996 56799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccCc-cccccHHHHhccCCCC-------CC--H-HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 914 GLVQQEPA-LFSTTIYENIKYGNED-------AS--E-IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 914 ~~VpQdp~-Lf~gTIreNl~~~~~~-------~~--d-~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
+||||++. -|.-||+|=+.+|.-. .+ | +.+.+|++..++.++..+ .+ ..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r-------~~----~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADR-------PV----DELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcC-------cc----cccChhHHHHH
Confidence 99999964 5667999998877421 12 3 347788999999988654 23 45999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhh-hccCEEEEEeCCEEEEecChHHHh
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTI-RNADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti-~~~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
.|||||.++|+||+||||||+||....-.|++.+++.. +++|+|+|.|+++.. +.||++++|++|+|+.+|+|+|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999976 379999999999887 569999999999999999999998
Q ss_pred h
Q 001411 1060 R 1060 (1082)
Q Consensus 1060 ~ 1060 (1082)
.
T Consensus 228 T 228 (258)
T COG1120 228 T 228 (258)
T ss_pred C
Confidence 6
No 135
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-45 Score=393.24 Aligned_cols=231 Identities=55% Similarity=0.907 Sum_probs=211.0
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
|+++|++++|++...++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 47899999997543359999999999999999999999999999999999999999999999999887777778889999
Q ss_pred EccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCee
Q 001411 286 VSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL 365 (1082)
Q Consensus 286 v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~il 365 (1082)
++|++++|+.|++||+.++.+....+++.+.++..++.+.++.+|.|+++..+....+||||||||++|||||+.+|+++
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999876554556677777888888999999999999999999999999999999999999999999
Q ss_pred EEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhcCchhH
Q 001411 366 LLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYA 436 (1082)
Q Consensus 366 llDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 436 (1082)
||||||++||+.+...+.+.|.++.+++|+|++||+++.+..||++++|++|++++.|+++++....+.|+
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~ 231 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGGVYA 231 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCcchh
Confidence 99999999999999999999999877899999999999998899999999999999999988877655544
No 136
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=6.5e-45 Score=375.50 Aligned_cols=205 Identities=35% Similarity=0.530 Sum_probs=171.6
Q ss_pred EEEEEEEEECCCCC--CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHH---HH-
Q 001411 206 IEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK---WL- 279 (1082)
Q Consensus 206 i~~~~v~~~y~~~~--~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~- 279 (1082)
++++|+++.|.... ..+|+++||+|++||+++|+|||||||||||++|.|+..|++|+|.++|.|+..++.+ .+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996432 3499999999999999999999999999999999999999999999999999988743 33
Q ss_pred hhhceEEccCCCcChh-cHHHHHhcCC----CCC--CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHH
Q 001411 280 REQMGLVSQEPALFAT-SIANNILLGK----EDA--SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRI 352 (1082)
Q Consensus 280 ~~~i~~v~Q~~~l~~~-ti~~ni~~g~----~~~--~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri 352 (1082)
|++||||+|+..|++. |++|||.+.. ... ..++..+.++..++.+... .....+|||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 4579999999999887 9999998632 111 1223333444444433332 133468999999999
Q ss_pred HHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccccCCEEEEEeCCEEE
Q 001411 353 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIMVLKNGQVV 420 (1082)
Q Consensus 353 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~ 420 (1082)
||||||+.+|+|++.||||++||.++.+.+++.+.++. .++|+|+|||++.....|||++.|+||++.
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 99999999999999999999999999999999999884 378999999999999999999999999954
No 137
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.5e-45 Score=399.83 Aligned_cols=219 Identities=35% Similarity=0.610 Sum_probs=198.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|++ . .+|+|+||+|+.||.++|+|||||||||++++|.|+.+|++|+|.|||.|++++++++ +.|
T Consensus 3 ~i~l~~v~K~yg~--~-~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGS--F-EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCC--c-eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 5899999999962 1 2899999999999999999999999999999999999999999999999999999876 789
Q ss_pred EEEcccCccccc-cHHHHhccCCCC------CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 914 GLVQQEPALFST-TIYENIKYGNED------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 914 ~~VpQdp~Lf~g-TIreNl~~~~~~------~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
++|+|+..||+. ||++||.|+... ..++++.++++..++.+.+++.| .+||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHH
Confidence 999999999986 999999997432 22566888899999988888776 679999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhcc
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKEN 1063 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~~ 1063 (1082)
||+++|++++||||.|+||+.....+...|++..+ +.|+|.|||+...+.. +|||+||++|+|.+.|+|.|+.+++.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~ 226 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPA 226 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCcc
Confidence 99999999999999999999999999999998654 6899999999988865 99999999999999999999998777
Q ss_pred chHHH
Q 001411 1064 GIYKQ 1068 (1082)
Q Consensus 1064 g~f~~ 1068 (1082)
..|-.
T Consensus 227 n~fVA 231 (338)
T COG3839 227 NLFVA 231 (338)
T ss_pred chhhh
Confidence 66543
No 138
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.9e-45 Score=367.71 Aligned_cols=226 Identities=38% Similarity=0.600 Sum_probs=196.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHH---HHh
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SLR 910 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR 910 (1082)
.|++++|+++|. ++.|++||||+|++||.+||+|+||||||||++++.|+..|++|+|.|+|.|+.+++.+ .+|
T Consensus 8 ~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 8 LIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred eEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 599999999996 45799999999999999999999999999999999999999999999999999999864 569
Q ss_pred cceEEEcccCccccc-cHHHHhccCCCC---CCHHHHHH----HHHHhcHHHH-HhhCcccccccccCCCCCCChhHHHH
Q 001411 911 RKIGLVQQEPALFST-TIYENIKYGNED---ASEIELMK----ATKAANAHGF-ISRMPEGYQSHVGDRGVQLSGGQKQR 981 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~g-TIreNl~~~~~~---~~d~ei~~----al~~a~l~~~-i~~lp~gldt~v~e~G~~LSgGQrQr 981 (1082)
+++|+++|+-.||+. ||+||+.+...+ .+++++.+ -++.+|+..- -+. -.+.||||.+.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~-----------~PsELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADL-----------YPSELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhh-----------CchhhcchHHHH
Confidence 999999999999975 999999985332 34444433 2444555443 222 246899999999
Q ss_pred HHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 982 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 982 laLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
+||||||.-+|+||++|||||+|||.+...+-+.|++..+ +.|+++|||+++++.. ||||+++.+|+|+..|+++|+
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998754 7899999999999976 899999999999999999999
Q ss_pred hhhccchHHHHHHHh
Q 001411 1059 LRKENGIYKQLIRLQ 1073 (1082)
Q Consensus 1059 l~~~~g~f~~l~~~~ 1073 (1082)
.+.++.+.++.++-.
T Consensus 234 ~~sd~P~v~qf~~G~ 248 (263)
T COG1127 234 LASDDPWVRQFFNGI 248 (263)
T ss_pred HhCCCHHHHHHhcCC
Confidence 997777888877543
No 139
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.7e-44 Score=395.22 Aligned_cols=238 Identities=34% Similarity=0.591 Sum_probs=215.5
Q ss_pred CCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhh
Q 001411 202 LAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLRE 281 (1082)
Q Consensus 202 ~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~ 281 (1082)
..+.|+++|++++|++....+|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 45679999999999754345999999999999999999999999999999999999999999999999998888888899
Q ss_pred hceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccC
Q 001411 282 QMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRN 361 (1082)
Q Consensus 282 ~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~ 361 (1082)
.++|++|++++|++|++||+..... ...+++.++.+..++.+.+..+|.|+++.+++.+.+||||||||++||||++++
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~ 174 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRK 174 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999875432 234567777788888899999999999999999999999999999999999999
Q ss_pred CCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhc-CchhHHHHH
Q 001411 362 PKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK-GGEYAALVN 440 (1082)
Q Consensus 362 ~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~ 440 (1082)
|+++||||||++||+++++.+.+.+.++.+++|+|++||+++.+..||+|++|++|++++.|+++++.+. .+.|++++.
T Consensus 175 p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~ 254 (257)
T cd03288 175 SSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVR 254 (257)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHh
Confidence 9999999999999999999999999987778999999999999988999999999999999999998865 345666554
No 140
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-44 Score=389.35 Aligned_cols=226 Identities=50% Similarity=0.873 Sum_probs=208.4
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++|++++|++. ..+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 2 ~l~~~~l~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (229)
T cd03254 2 EIEFENVNFSYDEK-KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIG 80 (229)
T ss_pred eEEEEEEEEecCCC-CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEE
Confidence 58999999999742 24999999999999999999999999999999999999999999999999998877778888999
Q ss_pred EEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCe
Q 001411 285 LVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKI 364 (1082)
Q Consensus 285 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~i 364 (1082)
|++|++++|+.|++||+.++.+....+++.++++..++.+.++.+|.|+++.++....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~l 160 (229)
T cd03254 81 VVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPKI 160 (229)
T ss_pred EecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999988665556677778888889999999999999999999999999999999999999999999
Q ss_pred eEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhc
Q 001411 365 LLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 365 lllDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
+||||||++||+.+.+.+.+.|.++.+++|+|++||+++.+..||++++|++|++++.|+.+++.++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 161 LILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 9999999999999999999999988778999999999999888999999999999999988777543
No 141
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-45 Score=404.73 Aligned_cols=214 Identities=32% Similarity=0.558 Sum_probs=192.7
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhc
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 283 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 283 (1082)
..++++||+++|++ ..+++|+||+|++||+++++|||||||||+|++|+|+.+|++|+|.++|+++..++++ ++.|
T Consensus 4 ~~l~i~~v~k~yg~--~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFGD--FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecCC--eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 35999999999983 4599999999999999999999999999999999999999999999999999998876 4679
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCCC---C----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 001411 284 GLVSQEPALFAT-SIANNILLGKEDA---S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 355 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lA 355 (1082)
|+|+|+..||+. ||+|||.||.... . .+++.++++.+++.++-.+.|. +|||||+||||||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~-----------qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPH-----------QLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChh-----------hhChHHHHHHHHH
Confidence 999999999988 9999999997611 1 2478888888888887777664 8999999999999
Q ss_pred HhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCcccc-ccCCEEEEEeCCEEEEecCchhhhhcC
Q 001411 356 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTV-RDVDTIMVLKNGQVVESGTHVDLISKG 432 (1082)
Q Consensus 356 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~~ 432 (1082)
|||..+|++||||||+||||.+-+..++..++++. .+.|.|+|||+.++. ..+|||.||++|+|...|+++|+....
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999999988888764 378999999999875 568999999999999999999998764
No 142
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-44 Score=390.09 Aligned_cols=233 Identities=53% Similarity=0.850 Sum_probs=212.3
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|++++|++. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4689999999642 349999999999999999999999999999999999999999999999999988888888889999
Q ss_pred EccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCee
Q 001411 286 VSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL 365 (1082)
Q Consensus 286 v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~il 365 (1082)
++|++++|+.|++||+.++.+....+++.++++..++.+.+..+|.|+++.+..+..+||||||||++|||||+++|+++
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999876555556677778888888999999999999999999999999999999999999999999
Q ss_pred EEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhcCchhHHHH
Q 001411 366 LLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALV 439 (1082)
Q Consensus 366 llDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 439 (1082)
||||||++||+.+...+.+.|.++.+++|+|++||+++.+..||++++|++|++++.|+.+++......|+..+
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~~~~~ 233 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLYAEMW 233 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHHHHHH
Confidence 99999999999999999999998866889999999999998899999999999999999988877665555543
No 143
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.5e-44 Score=385.65 Aligned_cols=220 Identities=44% Similarity=0.761 Sum_probs=202.6
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcc
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 912 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 912 (1082)
|.|+++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 468999999999632 2469999999999999999999999999999999999999999999999999988887788899
Q ss_pred eEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCC
Q 001411 913 IGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP 992 (1082)
Q Consensus 913 i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~ 992 (1082)
++|+||+|.+|..|++||+.++....+.+++.++++..++.+.+..+|.|++|.+.+...+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998764444566778889999999999999999999999888999999999999999999999
Q ss_pred CEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEec
Q 001411 993 SILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 993 ~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G 1053 (1082)
++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999886668999999999988779999999999998765
No 144
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-45 Score=366.65 Aligned_cols=214 Identities=35% Similarity=0.576 Sum_probs=185.4
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCC---HHHHhh
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ---LKWLRE 281 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~---~~~~~~ 281 (1082)
.|+++||+..||+. ..+|+||||+|++||+++|+|+||||||||+++|.|+.+|++|+|.++|.++.... ...+|+
T Consensus 3 ~i~~~nl~k~yp~~-~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYPGG-HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecCCC-ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 48999999999853 46999999999999999999999999999999999999999999999999988776 556788
Q ss_pred hceEEccCCCcChh-cHHHHHhcCCCCC-----------CH---HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCCh
Q 001411 282 QMGLVSQEPALFAT-SIANNILLGKEDA-----------SM---DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSG 346 (1082)
Q Consensus 282 ~i~~v~Q~~~l~~~-ti~~ni~~g~~~~-----------~~---~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSg 346 (1082)
+|||++|++.|.+. ||.+|++.|+-.. +. ....++++..++.+. .-.+..+|||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~-----------A~qra~~LSG 150 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDK-----------AYQRASTLSG 150 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHH-----------HHHHhccCCc
Confidence 99999999999877 9999999875432 12 223344445544443 3345568999
Q ss_pred HHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccc-cCCEEEEEeCCEEEEec
Q 001411 347 GQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESG 423 (1082)
Q Consensus 347 Gqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g 423 (1082)
||+|||+|||||+++|+|+|-|||+|+|||.+.+.+++.|++.. .|.|+|+.-|+++..+ +||||+-|++|+|+.+|
T Consensus 151 GQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg 230 (258)
T COG3638 151 GQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDG 230 (258)
T ss_pred chhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeC
Confidence 99999999999999999999999999999999999999999874 4789999999999986 59999999999999999
Q ss_pred Cchhhhh
Q 001411 424 THVDLIS 430 (1082)
Q Consensus 424 ~~~~l~~ 430 (1082)
+++|+-+
T Consensus 231 ~~~el~~ 237 (258)
T COG3638 231 PASELTD 237 (258)
T ss_pred ChhhhhH
Confidence 9998644
No 145
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.8e-45 Score=353.69 Aligned_cols=208 Identities=32% Similarity=0.502 Sum_probs=187.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHH---HHhc
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SLRR 911 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR~ 911 (1082)
|+|+||+.+|+. +.++|+||||+|++||.+-++|||||||||++++|++...|+.|+|.++|.|++++.-+ -||+
T Consensus 2 I~f~~V~k~Y~~--g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPG--GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCC--CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 899999999984 46799999999999999999999999999999999999999999999999999988755 5899
Q ss_pred ceEEEcccCcccc-ccHHHHhccCCC------CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHH
Q 001411 912 KIGLVQQEPALFS-TTIYENIKYGNE------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 912 ~i~~VpQdp~Lf~-gTIreNl~~~~~------~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaL 984 (1082)
+||+|+||-.|.. -|+.||+++... ..-.+.+.++|+.+|+.+-...+| ..|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 9999999998775 599999988532 112356778999999999988888 5799999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecCh
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSH 1055 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~ 1055 (1082)
|||++.+|++||-||||-|||+++...|++.+.+.- .|.||++.||+.+.+.. --|++.+++|+++....+
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999999999874 59999999999999977 578999999999976544
No 146
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.5e-44 Score=346.77 Aligned_cols=210 Identities=36% Similarity=0.569 Sum_probs=188.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|.+++|.|+|..- | =.++++|++||+|||+||||||||||++++.||..|.+|+|.|+|+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~---~--~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHL---P--MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcc---e--EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 5788999999632 2 368999999999999999999999999999999999999999999999877664 46799
Q ss_pred EEcccCccccc-cHHHHhccCCCC------CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFST-TIYENIKYGNED------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~g-TIreNl~~~~~~------~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
+++||.-||.. ||++|+.+|... ...+.+..++.++|+.+|.++|| ..||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----------~~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----------GELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-----------cccCchHHHHHHHHHH
Confidence 99999999975 999999988431 23466889999999999999998 4699999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhc
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKE 1062 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~ 1062 (1082)
|+|+.|||+||||.|+|||.-.+.+...+.... ++.|+++|||.++.+.. +|+++++++|||+++|+-+++++..
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~ 221 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGK 221 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccC
Confidence 999999999999999999999999999998876 46799999999999865 9999999999999999999998743
No 147
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.5e-44 Score=383.89 Aligned_cols=219 Identities=39% Similarity=0.646 Sum_probs=203.6
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++|++++|++...++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (221)
T cd03244 2 DIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRIS 81 (221)
T ss_pred cEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEE
Confidence 58999999999754345999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCe
Q 001411 285 LVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKI 364 (1082)
Q Consensus 285 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~i 364 (1082)
|++|++.+++.|++||+.+... ...+++.++++..++.+++.++|.|+++..++.+.+||||||||++|||||+.+|++
T Consensus 82 ~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 82 IIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999986543 356778888888999999999999999999999999999999999999999999999
Q ss_pred eEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecC
Q 001411 365 LLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGT 424 (1082)
Q Consensus 365 lllDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~ 424 (1082)
+||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 999999999999999999999998877789999999999998899999999999998775
No 148
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-44 Score=381.19 Aligned_cols=215 Identities=39% Similarity=0.636 Sum_probs=194.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCC-CCCHHHHhcc
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIR-TLNLRSLRRK 912 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~-~i~~~~lR~~ 912 (1082)
.|+++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|++.|++|.|.+||.+++ ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48999999999844 58999999999999999999999999999999999999999999999999998 4788999999
Q ss_pred eEEEcccC--ccccccHHHHhccCCC--CCCHHH----HHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHH
Q 001411 913 IGLVQQEP--ALFSTTIYENIKYGNE--DASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 913 i~~VpQdp--~Lf~gTIreNl~~~~~--~~~d~e----i~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaL 984 (1082)
+|+|+|+| ++|..||.+.+++|.. ..+.+| +.++++.+++.++.++. ..+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----------p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRP-----------PFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCC-----------ccccCCcceeeHHh
Confidence 99999999 7999999999999743 234433 66777788887764443 36899999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhh
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
|.+|..+|+|||||||||+||+...+.+.+.++++.+ ++|+|+|||+++.+.. |||++||++|+++.+|+|+++.++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999999999864 4799999999999987 999999999999999999999874
No 149
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-44 Score=382.84 Aligned_cols=215 Identities=35% Similarity=0.643 Sum_probs=193.8
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCC-CCCHHHHhhhc
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLK-SLQLKWLREQM 283 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~-~~~~~~~~~~i 283 (1082)
.++++|++|+|+++ .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.++|.++. ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 47899999999876 56999999999999999999999999999999999999999999999999988 47888999999
Q ss_pred eEEccCC--CcChhcHHHHHhcCCCCC--C----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 001411 284 GLVSQEP--ALFATSIANNILLGKEDA--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 355 (1082)
Q Consensus 284 ~~v~Q~~--~l~~~ti~~ni~~g~~~~--~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lA 355 (1082)
|||+|+| ++|..||.|.++||..+. + .+++.++++.+++.++.++.| .+||||||||+|||
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaIA 150 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAIA 150 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHhh
Confidence 9999999 799999999999997643 2 245667777777766655554 58999999999999
Q ss_pred HhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhc
Q 001411 356 RAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 356 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
.+|+.+|+++|||||||+||+...+.+.+.++++.+ ++|+|++||+++.+.. ||++++|++|+++.+|++.++.+.
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 999999999999999999999999999999999864 4799999999999876 999999999999999999888764
No 150
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-44 Score=376.08 Aligned_cols=209 Identities=32% Similarity=0.543 Sum_probs=186.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++|++++|.+ . +||+||||+|++|+.+||+||||||||||+++++|+.+|++|+|.++|.+++.... +.+|
T Consensus 4 ~i~v~nl~v~y~~--~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGN--R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECC--E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 4999999999963 2 69999999999999999999999999999999999999999999999998876533 5789
Q ss_pred EEEcccC---ccccccHHHHhccCCCC----------CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 914 GLVQQEP---ALFSTTIYENIKYGNED----------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 914 ~~VpQdp---~Lf~gTIreNl~~~~~~----------~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
|||||.. .-|+-||+|=+..|... .+.+++.+||+++++.++..+ ++|+ |||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-------~i~~----LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-------QIGE----LSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-------cccc----cCcHHHH
Confidence 9999965 35889999999886321 124789999999999988644 5655 9999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME-GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
|+.|||||+.+|++|+|||||+++|+.++..+.+.|+++.+ ||||++|+|+++.+.. +|+|+.|+ ++++..|+|++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999999999999874 8999999999999965 99999996 578899999999
Q ss_pred hh
Q 001411 1059 LR 1060 (1082)
Q Consensus 1059 l~ 1060 (1082)
+.
T Consensus 226 ~~ 227 (254)
T COG1121 226 LT 227 (254)
T ss_pred cC
Confidence 86
No 151
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=4.9e-44 Score=388.02 Aligned_cols=232 Identities=64% Similarity=0.987 Sum_probs=208.6
Q ss_pred EEEEEEEEECCCCC-CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 206 IEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 206 i~~~~v~~~y~~~~-~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
++++|+++.|++.. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 46899999997532 35999999999999999999999999999999999999999999999999988777777778899
Q ss_pred EEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCe
Q 001411 285 LVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKI 364 (1082)
Q Consensus 285 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~i 364 (1082)
|++|++.+|+.|++||+.++.+....+++.+.++..++.+.+..+|.|+++..+....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655455566667777788888999999999999999999999999999999999999999
Q ss_pred eEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhcCchhHH
Q 001411 365 LLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAA 437 (1082)
Q Consensus 365 lllDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 437 (1082)
+||||||++||+.+.+.+.+.|.++.+++|+|++||+++.+..||++++|++|++++.|+.+++......+..
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~ 233 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQKGVYAK 233 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcChhHHH
Confidence 9999999999999999999999987777899999999999888999999999999999998888765544443
No 152
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-44 Score=399.87 Aligned_cols=220 Identities=27% Similarity=0.473 Sum_probs=186.7
Q ss_pred cEEEEeEEEECCCCC--CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCC-------
Q 001411 834 NIELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL------- 904 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i------- 904 (1082)
.|+++||+|+|+... +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.+.
T Consensus 21 ~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 21 ILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred eEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccccc
Confidence 599999999997321 24699999999999999999999999999999999999999999999999998653
Q ss_pred ---------CHHHHhcceEEEcccC--ccccccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhhCccccc-ccccCC
Q 001411 905 ---------NLRSLRRKIGLVQQEP--ALFSTTIYENIKYGNE--DASEIELMKATKAANAHGFISRMPEGYQ-SHVGDR 970 (1082)
Q Consensus 905 ---------~~~~lR~~i~~VpQdp--~Lf~gTIreNl~~~~~--~~~d~ei~~al~~a~l~~~i~~lp~gld-t~v~e~ 970 (1082)
+...+|++++||+|+| .+|+.|+++|+.++.. ..+.++..+ . ..++++.+ |++ ...+..
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~---~--~~~~l~~~--gL~~~~~~~~ 173 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK---L--AKFYLNKM--GLDDSYLERS 173 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH---H--HHHHHHHc--CCChhHhcCC
Confidence 3567899999999998 6999999999987521 233333221 1 12344443 454 345667
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-ccCEEEEEeCCE
Q 001411 971 GVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-NADKIAVLQQGK 1048 (1082)
Q Consensus 971 G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ 1048 (1082)
+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+. .||||+||++|+
T Consensus 174 ~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 174 PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 78999999999999999999999999999999999999999999998764 5889999999999885 599999999999
Q ss_pred EEEecChHHHhh
Q 001411 1049 VAEIGSHEQLLR 1060 (1082)
Q Consensus 1049 ive~G~~~eLl~ 1060 (1082)
+++.|+|+++.+
T Consensus 254 i~~~g~~~~~~~ 265 (320)
T PRK13631 254 ILKTGTPYEIFT 265 (320)
T ss_pred EEEeCCHHHHhc
Confidence 999999998765
No 153
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-44 Score=362.86 Aligned_cols=222 Identities=33% Similarity=0.535 Sum_probs=193.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCC---HHHHh
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN---LRSLR 910 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---~~~lR 910 (1082)
.|+++||+.+|| .+..+|+||||+|++||.|||+|+||||||||+++|.|+.+|++|+|.++|.++...+ ++.+|
T Consensus 3 ~i~~~nl~k~yp--~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYP--GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecC--CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 489999999998 3568999999999999999999999999999999999999999999999999999887 67789
Q ss_pred cceEEEcccCcccc-ccHHHHhccCCC-----------CCC---HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCC
Q 001411 911 RKIGLVQQEPALFS-TTIYENIKYGNE-----------DAS---EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 975 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~-gTIreNl~~~~~-----------~~~---d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LS 975 (1082)
++||+|+|++-|-+ -|+-+|+..|.- -.+ .....++|+++++.++.-. +..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~q-----------ra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQ-----------RASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHH-----------HhccCC
Confidence 99999999999886 499999976531 122 3345677888888776432 346799
Q ss_pred hhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEe
Q 001411 976 GGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEI 1052 (1082)
Q Consensus 976 gGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~ 1052 (1082)
|||+||++|||||..+|+|+|-|||+|+|||++.+.|++.|++.. .|.|||+.-|.++..+. ||||+-|++|+|+-.
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 999999999999999999999999999999999999999999864 47899999999999965 999999999999999
Q ss_pred cChHHHhhhccchHHHHHH
Q 001411 1053 GSHEQLLRKENGIYKQLIR 1071 (1082)
Q Consensus 1053 G~~~eLl~~~~g~f~~l~~ 1071 (1082)
|++.||-+ ..+...|.
T Consensus 230 g~~~el~~---~~~~~iYg 245 (258)
T COG3638 230 GPASELTD---EALDEIYG 245 (258)
T ss_pred CChhhhhH---HHHHHHhc
Confidence 99999643 33444443
No 154
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=5e-44 Score=384.82 Aligned_cols=219 Identities=48% Similarity=0.798 Sum_probs=199.9
Q ss_pred ccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHh
Q 001411 831 IKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLR 910 (1082)
Q Consensus 831 ~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR 910 (1082)
..+.|+++|++++|+.+.+.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45679999999999743234699999999999999999999999999999999999999999999999999888888888
Q ss_pred cceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHcc
Q 001411 911 RKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILK 990 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~ 990 (1082)
++++|+||+|.+|++|+++|+.++.......++++..+..++.++++.+|.|+++.+.....+||||||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999997654444556666667778889999999999998999999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEE
Q 001411 991 NPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKV 1049 (1082)
Q Consensus 991 ~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~i 1049 (1082)
+|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999998777899999999999988999999999975
No 155
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-44 Score=375.15 Aligned_cols=210 Identities=30% Similarity=0.544 Sum_probs=183.8
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.|+++|++|+|.++ ++|+||||++++|++++|+||||||||||+|+|+|+++|++|+|.+.|.+.+.... +.+||
T Consensus 4 ~i~v~nl~v~y~~~--~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR--PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE--eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 58999999999854 49999999999999999999999999999999999999999999999987654332 46799
Q ss_pred EEccCC---CcChhcHHHHHhcCCCCC----------CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHH
Q 001411 285 LVSQEP---ALFATSIANNILLGKEDA----------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 351 (1082)
Q Consensus 285 ~v~Q~~---~l~~~ti~~ni~~g~~~~----------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqr 351 (1082)
||||.. |-|+-||+|-+.+|.... +.+++.++++.+++.++.++ .-..|||||+||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-----------~i~~LSGGQ~QR 147 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-----------QIGELSGGQKQR 147 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-----------cccccCcHHHHH
Confidence 999965 678999999999985322 24778889998888766543 234799999999
Q ss_pred HHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC-CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhh
Q 001411 352 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS-NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 352 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|-|||||+++|++|+|||||+++|+.++..+.+.|.++++ |+||++||||++.+. ++|+|+.| |+++...|++++..
T Consensus 148 V~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~~ 226 (254)
T COG1121 148 VLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEVL 226 (254)
T ss_pred HHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhcc
Confidence 9999999999999999999999999999999999999865 899999999999875 58999999 56788999999987
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
+.
T Consensus 227 ~~ 228 (254)
T COG1121 227 TE 228 (254)
T ss_pred CH
Confidence 64
No 156
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-44 Score=365.53 Aligned_cols=222 Identities=33% Similarity=0.529 Sum_probs=186.0
Q ss_pred cEEEEEEEEECCCCCC--ccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCC-CHHHHhh
Q 001411 205 QIEFSEVCFAYPSRPH--MVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL-QLKWLRE 281 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~--~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~-~~~~~~~ 281 (1082)
.++++|+++.|+.... ++|+||||++.+||+++|+|+||||||||.++|+|+.+|++|+|.++|.++... .....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 4889999999975431 399999999999999999999999999999999999999999999999877643 3346778
Q ss_pred hceEEccCCCc-Chh--cHHHHHhcCCC----CCCHHHHHHHHHHhchHH-HHhcCCCCccccccCCCCCCChHHHHHHH
Q 001411 282 QMGLVSQEPAL-FAT--SIANNILLGKE----DASMDRVIEAAKAANAHS-FVEGLPDGYQTQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 282 ~i~~v~Q~~~l-~~~--ti~~ni~~g~~----~~~~~~~~~~~~~~~~~~-~i~~lp~g~~t~~g~~g~~LSgGqkqri~ 353 (1082)
.|.+|+|||.- +|. ||++-|.-+.. ....+++.++++.+++.+ ++.+.|+ +|||||+||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~-----------eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPH-----------ELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCch-----------hcChhHHHHHH
Confidence 89999999962 332 77776653321 123455777777777643 5556664 79999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCC--CeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhh
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSN--RTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~--~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
|||||..+|++||||||||+||+..+..|++.+.+++++ -|.|+|||++..+.+ ||||+||++|+++|.++.+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 999999999999999999999999999999999988764 599999999999987 89999999999999999999987
Q ss_pred c-CchhHH
Q 001411 431 K-GGEYAA 437 (1082)
Q Consensus 431 ~-~~~~~~ 437 (1082)
. ...|.+
T Consensus 232 ~~~h~ytr 239 (252)
T COG1124 232 HPSHPYTR 239 (252)
T ss_pred CCccHHHH
Confidence 6 334433
No 157
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-44 Score=387.82 Aligned_cols=212 Identities=40% Similarity=0.612 Sum_probs=182.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCH---HHHhc
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL---RSLRR 911 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~ 911 (1082)
|+++||+++|+ +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFG---GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 47899999996 3469999999999999999999999999999999999999999999999999987764 56789
Q ss_pred ceEEEcccCccccc-cHHHHhccCCC---CCCHH----HHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHH
Q 001411 912 KIGLVQQEPALFST-TIYENIKYGNE---DASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 983 (1082)
Q Consensus 912 ~i~~VpQdp~Lf~g-TIreNl~~~~~---~~~d~----ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 983 (1082)
+++||||++.+|+. |+++|+.++.. ..+.+ ++.++++..++.++. .....+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAE-----------DLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHH
Confidence 99999999999986 99999986421 12322 344455555544332 2333579999999999
Q ss_pred HHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 984 IARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 984 LARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999999998753 7899999999999875 99999999999999999999876
No 158
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.1e-43 Score=380.71 Aligned_cols=219 Identities=42% Similarity=0.724 Sum_probs=200.1
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++|+++.|++....+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (220)
T cd03245 2 RIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIG 81 (220)
T ss_pred eEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEE
Confidence 58999999999753345999999999999999999999999999999999999999999999999987777777788999
Q ss_pred EEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCe
Q 001411 285 LVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKI 364 (1082)
Q Consensus 285 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~i 364 (1082)
|++|++++|+.|++||+.++.+....+++.+.++..++.+.++..|.|++|.+.....+||||||||++||||++.+|++
T Consensus 82 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~l 161 (220)
T cd03245 82 YVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPI 161 (220)
T ss_pred EeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999989999999887554455667778888889889999999999999999999999999999999999999999
Q ss_pred eEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEec
Q 001411 365 LLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESG 423 (1082)
Q Consensus 365 lllDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g 423 (1082)
+||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 162 lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 162 LLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 99999999999999999999999986668999999999988789999999999998654
No 159
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3e-44 Score=386.80 Aligned_cols=212 Identities=37% Similarity=0.612 Sum_probs=183.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccc-----cCCccEEEECCccCCCCC--HH
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFY-----DPISGTVLIDGYDIRTLN--LR 907 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~-----~p~~G~I~idG~di~~i~--~~ 907 (1082)
|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.++|.++.+.+ ..
T Consensus 1 i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYG---DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 57899999996 346999999999999999999999999999999999999 999999999999998776 56
Q ss_pred HHhcceEEEcccCccccccHHHHhccCCCC---C----CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 908 SLRRKIGLVQQEPALFSTTIYENIKYGNED---A----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 908 ~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~---~----~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
.+|++++|+||++.+|..|++||+.++... . .++++.++++..++.+...+.++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 788999999999999988999999864221 1 12345566666666554433211 4689999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
|++|||||+++|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 999999999999999999999999999999999999988655899999999999865 999999999999999998764
No 160
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.1e-43 Score=366.34 Aligned_cols=207 Identities=39% Similarity=0.587 Sum_probs=174.0
Q ss_pred EEEEeEEEECCCCCC-cccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHH---HH-
Q 001411 835 IELRNVSFKYPVRPD-ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SL- 909 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~-~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~l- 909 (1082)
++++||+..|..... .++|+++||+|++||.|||+||||||||||+++|.++..|++|.|.++|.|+..++.+ .+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 679999999974322 4799999999999999999999999999999999999999999999999999999854 34
Q ss_pred hcceEEEcccCcccc-ccHHHHhccC----CCCC--CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 910 RRKIGLVQQEPALFS-TTIYENIKYG----NEDA--SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 910 R~~i~~VpQdp~Lf~-gTIreNl~~~----~~~~--~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
|++||+|+|+..|++ -|++||+.+. .... ..+...+.++.+++.+... .....+||||||||+
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 567999999999886 4999999842 1111 1233444555556654433 123467999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhccCEEEEEeCCEEEE
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRNADKIAVLQQGKVAE 1051 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive 1051 (1082)
||||||+.+|+|++.||||.+||.+|.+.|.+.+++.. .++|+|+|||+......|||++.|.+|++.+
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999999874 3789999999999999999999999999543
No 161
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-43 Score=386.54 Aligned_cols=219 Identities=32% Similarity=0.546 Sum_probs=191.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc---CCccEEEECCccCCCCCHHHHh
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD---PISGTVLIDGYDIRTLNLRSLR 910 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~lR 910 (1082)
.|+++||+++|+ +.++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++...+...+|
T Consensus 2 ~~~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYG---KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEEC---CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 378999999996 3469999999999999999999999999999999999985 6899999999999988888889
Q ss_pred cceEEEcccCccccccHHHHhccCCC--------CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 911 RKIGLVQQEPALFSTTIYENIKYGNE--------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~gTIreNl~~~~~--------~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
++++|+||+|.+|+.|+++|+.++.. ...++++.++++.+++.+++.. .....+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 99999999999999999999986421 1122345666777777554432 23445678999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhh
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
+|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999999987778999999999999864 999999999999999999999864
Q ss_pred c
Q 001411 1062 E 1062 (1082)
Q Consensus 1062 ~ 1062 (1082)
+
T Consensus 232 ~ 232 (246)
T PRK14269 232 P 232 (246)
T ss_pred C
Confidence 3
No 162
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=3.3e-40 Score=381.34 Aligned_cols=474 Identities=18% Similarity=0.142 Sum_probs=349.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccC---CChhHHHHHHHhhHHHHHHHHH
Q 001411 554 QVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDE---NNTGLLISTLAADATLVRSALA 630 (1082)
Q Consensus 554 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~---~~~G~il~r~s~D~~~i~~~~~ 630 (1082)
..+.+|.+++.+..+....+.|+......++-.-|-+.+.++-+...-.|+.... +..-..=.|+..|+...-+...
T Consensus 87 ~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~ 166 (604)
T COG4178 87 QQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTL 166 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHH
Confidence 3466777777778888888888888888888888888888888887744433211 0001223588889888777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 001411 631 DRLSIIVQNVALTVTAFVIAF---------------ILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATS 695 (1082)
Q Consensus 631 ~~l~~~~~~~~~~~~~~~~~~---------------~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (1082)
.....++.+++.++....+.. .+...+.+++++.+++.-++.....+.+-+..-+..+..+....
T Consensus 167 ~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~ 246 (604)
T COG4178 167 DLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRY 246 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHH
Confidence 666666666655554444433 12222223333333333333444445444444455555556666
Q ss_pred HHHHHHccHHHHHHcCcHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHH
Q 001411 696 VAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIM 775 (1082)
Q Consensus 696 ~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 775 (1082)
.+.-..++.+.|-.|+-|+...++..+..+.......+..........+.....++...+-..++.-....|.+++|+++
T Consensus 247 ~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lm 326 (604)
T COG4178 247 SLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLM 326 (604)
T ss_pred HHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHH
Confidence 66667788899999999988877777776666655444444444444444444555555555566666788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--cCCCCCCCC--ccc---ccccccEEEEeEEEECCCCC
Q 001411 776 KSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKT--AIQPDDPAS--KEV---TEIKGNIELRNVSFKYPVRP 848 (1082)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~--~~~~~~~~~--~~~---~~~~g~I~~~~Vs~~Y~~~~ 848 (1082)
.+..+...+..+++.....++.+..-.+...|+.++..... +.+++.+.. ... ...+..|+|+|++..-|+
T Consensus 327 qa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~-- 404 (604)
T COG4178 327 QAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPD-- 404 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCC--
Confidence 98888888888899999999999988899999988764322 111111111 100 111467999999999873
Q ss_pred CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHH
Q 001411 849 DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIY 928 (1082)
Q Consensus 849 ~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIr 928 (1082)
+.+.|+++||+|+|||.+-|.|+||||||||+++|.|+++-.+|+|.+-. -..+-|+||.|++-.||+|
T Consensus 405 ~~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~GtLr 473 (604)
T COG4178 405 GQTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGTLR 473 (604)
T ss_pred CCeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCccHH
Confidence 34789999999999999999999999999999999999999999987641 1358899999999999999
Q ss_pred HHhccCCCC--CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCH
Q 001411 929 ENIKYGNED--ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDT 1006 (1082)
Q Consensus 929 eNl~~~~~~--~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~ 1006 (1082)
|=|.|.... .+|+|+.++|.++++.++++++.+ ...-..-||+||||||++||.||++|++++||||||+||+
T Consensus 474 e~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-----~~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe 548 (604)
T COG4178 474 EALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-----EDRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDE 548 (604)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-----cCcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccCh
Confidence 999987644 789999999999999999998742 2224467999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEe
Q 001411 1007 ASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQ 1045 (1082)
Q Consensus 1007 ~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~ 1045 (1082)
++|..+.+.+++...++|+|.|+||.....-.++.+-++
T Consensus 549 ~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 549 ETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 999999999999999999999999988877777766554
No 163
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=7.3e-44 Score=400.53 Aligned_cols=215 Identities=34% Similarity=0.528 Sum_probs=184.6
Q ss_pred EEEEEEEEECCCC--CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHH---Hh
Q 001411 206 IEFSEVCFAYPSR--PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW---LR 280 (1082)
Q Consensus 206 i~~~~v~~~y~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~~ 280 (1082)
|+++|++++|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 235999999999999999999999999999999999999999999999999998876544 57
Q ss_pred hhceEEccCCCcCh-hcHHHHHhcCCCC--CC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 001411 281 EQMGLVSQEPALFA-TSIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 281 ~~i~~v~Q~~~l~~-~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~ 353 (1082)
++|+|++|++.+|+ .|++||+.++... .+ .+++.+.++..++.+.. .....+|||||||||+
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~-----------~~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKH-----------DSYPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHHHH
Confidence 78999999999996 5999999986421 11 22344455555444333 3445689999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhh
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
|||||+.+|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998854 7899999999999865 99999999999999999999876
Q ss_pred c
Q 001411 431 K 431 (1082)
Q Consensus 431 ~ 431 (1082)
.
T Consensus 231 ~ 231 (343)
T TIGR02314 231 H 231 (343)
T ss_pred C
Confidence 5
No 164
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-43 Score=383.05 Aligned_cols=225 Identities=36% Similarity=0.565 Sum_probs=192.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSF---GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 489999999996 34699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEcccCccccccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccC
Q 001411 914 GLVQQEPALFSTTIYENIKYGNED--ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 991 (1082)
Q Consensus 914 ~~VpQdp~Lf~gTIreNl~~~~~~--~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~ 991 (1082)
+|+||+|.+|+.|+++|+.++... ..++++.+.++..++.+ .........||||||||++||||++++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNK----------EYATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCH----------HHhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999864321 12334445555554421 112334567999999999999999999
Q ss_pred CCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhccchHHH
Q 001411 992 PSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKENGIYKQ 1068 (1082)
Q Consensus 992 ~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~ 1068 (1082)
|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+...|.+
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 229 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTK 229 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHH
Confidence 99999999999999999999999999864 37899999999999875 9999999999999999999998754445655
Q ss_pred HHH
Q 001411 1069 LIR 1071 (1082)
Q Consensus 1069 l~~ 1071 (1082)
.+.
T Consensus 230 ~~~ 232 (241)
T PRK14250 230 LFI 232 (241)
T ss_pred HHH
Confidence 543
No 165
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.4e-43 Score=373.98 Aligned_cols=207 Identities=39% Similarity=0.627 Sum_probs=184.7
Q ss_pred ccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHH
Q 001411 829 TEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS 908 (1082)
Q Consensus 829 ~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~ 908 (1082)
||..+.|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...
T Consensus 1 ~~~~~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~ 79 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLED 79 (207)
T ss_pred CCCCCeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHH
Confidence 3456789999999999732 246999999999999999999999999999999999999999999999999998888888
Q ss_pred HhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHH
Q 001411 909 LRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAI 988 (1082)
Q Consensus 909 lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAl 988 (1082)
+|++++||||+|.+|++|+++|+.+.. ..+++++.++++ +......|||||+||++||||+
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~~~l~~~~-~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral 140 (207)
T cd03369 80 LRSSLTIIPQDPTLFSGTIRSNLDPFD-EYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARAL 140 (207)
T ss_pred HHhhEEEEecCCcccCccHHHHhcccC-CCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHH
Confidence 999999999999999999999998643 334444444433 2345678999999999999999
Q ss_pred ccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecCh
Q 001411 989 LKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSH 1055 (1082)
Q Consensus 989 L~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~ 1055 (1082)
+++|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|+|
T Consensus 141 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 141 LKRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred hhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 9999999999999999999999999999998778999999999999988999999999999998875
No 166
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-44 Score=373.73 Aligned_cols=215 Identities=32% Similarity=0.505 Sum_probs=184.0
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCH-HHHhhhc
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL-KWLREQM 283 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~~~~i 283 (1082)
.|.++|+++.|+.. .+++|||++|+.||.+|+.|||||||||||++|+|+..|++|+|.+||..+.+.+. ....++|
T Consensus 2 ~i~i~~~~~~~~~~--~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~V 79 (345)
T COG1118 2 SIRINNVKKRFGAF--GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKV 79 (345)
T ss_pred ceeehhhhhhcccc--cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcce
Confidence 47889999999854 49999999999999999999999999999999999999999999999994433322 3334679
Q ss_pred eEEccCCCcChh-cHHHHHhcCCC------CC--CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 001411 284 GLVSQEPALFAT-SIANNILLGKE------DA--SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 354 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~------~~--~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~l 354 (1082)
|||+|+..||.. ||+|||+||.+ .. ...++.+.++.+++...-++.| .+|||||||||||
T Consensus 80 GfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQRVAL 148 (345)
T COG1118 80 GFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQRVAL 148 (345)
T ss_pred eEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHHHHH
Confidence 999999999976 99999999972 11 2345666677777666655655 4899999999999
Q ss_pred HHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 355 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 355 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
||||..+|++||||||+++||++..+.+.+.|+++.. +.|+++|||+.++.. .||||++|++|+|...|+++|+...
T Consensus 149 ARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~ 228 (345)
T COG1118 149 ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDH 228 (345)
T ss_pred HHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcC
Confidence 9999999999999999999999999999998888743 689999999999865 5999999999999999999999765
Q ss_pred C
Q 001411 432 G 432 (1082)
Q Consensus 432 ~ 432 (1082)
.
T Consensus 229 P 229 (345)
T COG1118 229 P 229 (345)
T ss_pred C
Confidence 3
No 167
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-44 Score=393.70 Aligned_cols=221 Identities=35% Similarity=0.597 Sum_probs=198.9
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcc
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 912 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 912 (1082)
..|+++||+.+|. +..+++|+||+|++||.++++|||||||||++++|.||..|++|+|.+||.|+..++++ ++.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcc
Confidence 3599999999996 56799999999999999999999999999999999999999999999999999998876 578
Q ss_pred eEEEcccCccccc-cHHHHhccCCC---CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHH
Q 001411 913 IGLVQQEPALFST-TIYENIKYGNE---DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 913 i~~VpQdp~Lf~g-TIreNl~~~~~---~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaL 984 (1082)
|++|+|+..||+. ||++|+.||.. ...+ +.+.++++.+++.++-.+.| .+|||||+||+||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHH
Confidence 9999999999974 99999999854 1222 36778899999988877655 5799999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHHhhh
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
||||..+|++||||||-|+||..-...++.-+++..+ |.|.|+|||+-+... -+|||+||++|+|...|+|+|+..+
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 9999999999999999999999999999999998753 889999999998875 5999999999999999999999988
Q ss_pred ccchHHHH
Q 001411 1062 ENGIYKQL 1069 (1082)
Q Consensus 1062 ~~g~f~~l 1069 (1082)
+...|-.-
T Consensus 228 P~~~fVA~ 235 (352)
T COG3842 228 PATRFVAD 235 (352)
T ss_pred cchHHHHH
Confidence 87766543
No 168
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-43 Score=401.09 Aligned_cols=218 Identities=33% Similarity=0.565 Sum_probs=190.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+ +.++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...++. +++|
T Consensus 6 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFG---SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEEC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 599999999996 35699999999999999999999999999999999999999999999999999887653 6789
Q ss_pred EEEcccCccccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 914 GLVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 914 ~~VpQdp~Lf~g-TIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
+||+|++.+|+. |++||+.++.. ..+ ++++.++++..++.++..+. ...||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~-----------~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRY-----------VDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHH
Confidence 999999999975 99999998632 122 34566677777776554433 3579999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhcc
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKEN 1063 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~~ 1063 (1082)
||+++|+|||||||||+||+.+.+.+++.|++..+ ++|+|+|||+++.+.. ||||+||++|+|++.|+|+++.+++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998754 7899999999999855 99999999999999999999987666
Q ss_pred chHH
Q 001411 1064 GIYK 1067 (1082)
Q Consensus 1064 g~f~ 1067 (1082)
..|.
T Consensus 230 ~~~~ 233 (351)
T PRK11432 230 SRFM 233 (351)
T ss_pred chHH
Confidence 5443
No 169
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-43 Score=401.23 Aligned_cols=219 Identities=29% Similarity=0.500 Sum_probs=191.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+. +.++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++.+++.. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3899999999941 34699999999999999999999999999999999999999999999999999887764 4789
Q ss_pred EEEcccCcccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 914 GLVQQEPALFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 914 ~~VpQdp~Lf~-gTIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
+||||++.+|+ .|+++|+.++.. ..+ .+.+.++++.+++.++..+.| .+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999996 599999988642 122 234667778888877665544 579999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhcc
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKEN 1063 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~~ 1063 (1082)
||+++|++||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++.
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~ 227 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPA 227 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCc
Confidence 99999999999999999999999999999998754 7899999999998854 99999999999999999999988665
Q ss_pred chHH
Q 001411 1064 GIYK 1067 (1082)
Q Consensus 1064 g~f~ 1067 (1082)
..|.
T Consensus 228 ~~~~ 231 (356)
T PRK11650 228 STFV 231 (356)
T ss_pred cHHH
Confidence 5453
No 170
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-43 Score=390.95 Aligned_cols=217 Identities=31% Similarity=0.542 Sum_probs=190.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999632224699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEcccC--ccccccHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHH
Q 001411 914 GLVQQEP--ALFSTTIYENIKYGNED--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 985 (1082)
Q Consensus 914 ~~VpQdp--~Lf~gTIreNl~~~~~~--~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLA 985 (1082)
+||+|+| .++..|+++||.++... .+ ++.+.++++.+++.++..+. ..+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKERE-----------PARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 36678999999875321 22 24466777777776655443 357999999999999
Q ss_pred HHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhh
Q 001411 986 RAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 986 RAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||||++|++|++++.|+++++.+.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 7999999999999978999999999999999999998763
No 171
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-43 Score=364.75 Aligned_cols=197 Identities=36% Similarity=0.574 Sum_probs=175.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.+++++|+++|+ ...||+|+||+|++||.|+|+||||||||||++++.|+.+|++|+|.++|.++... ...+
T Consensus 3 ~l~i~~v~~~f~---~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFG---GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeC---ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 489999999997 36799999999999999999999999999999999999999999999999988543 4579
Q ss_pred EEEcccCcccc-ccHHHHhccCCCCC------CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 914 GLVQQEPALFS-TTIYENIKYGNEDA------SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 914 ~~VpQdp~Lf~-gTIreNl~~~~~~~------~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
+||+|++.||+ -|+++|+.++.... ..+...+.++.+|+.+|-++.| .+||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHH
Confidence 99999999999 49999999875421 2345777888899888877766 689999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEeC--CEE
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQ--GKV 1049 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~--G~i 1049 (1082)
||+.+|+||+||||.++||+.|...+|+-+.+.. .++||++|||++++... +|||+||.+ |+|
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999999999998865 36899999999999754 999999999 555
No 172
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-40 Score=352.52 Aligned_cols=476 Identities=20% Similarity=0.258 Sum_probs=346.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHH
Q 001411 555 VALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLS 634 (1082)
Q Consensus 555 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~ffd~~~~~~G~il~r~s~D~~~i~~~~~~~l~ 634 (1082)
++..|.++..+..+...+.......++.+...++|.++.++++..|+.-++. -.+++++.++++|+..|. +-...++
T Consensus 50 ~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier--~~~~rlla~L~~Dvr~IS-f~~s~lp 126 (546)
T COG4615 50 VLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER--LGSARLLAGLTSDVRNIS-FAFSRLP 126 (546)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH--hcccchhhhhccccccee-ehHhhhH
Confidence 3444555555666666677778888999999999999999999999999875 789999999999999998 5556777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHcCcHH
Q 001411 635 IIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEK 714 (1082)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~ 714 (1082)
.+.+..+.++++.....+.++++.++..+.+.+.++.-++......+..+..++...+...+.+..++|.+.++...-..
T Consensus 127 ~~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~ 206 (546)
T COG4615 127 ELVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERA 206 (546)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHH
Confidence 88899999999999999999888766666555555554444444334445666777888899999999999988765322
Q ss_pred H--HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 001411 715 R--ISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETL 792 (1082)
Q Consensus 715 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (1082)
+ +.+.+...-....+..............+++.+.+....+.+|+.... +.-+........+.+.+...++.+..
T Consensus 207 ~~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~---~w~st~~a~tivlvlLflr~pL~s~v 283 (546)
T COG4615 207 EYVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSL---GWASTNVAATIVLVLLFLRTPLLSAV 283 (546)
T ss_pred HHHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccchhhHHHHHHHHHHHHhhHHHHHH
Confidence 2 122222111111111111111111112233334444444445554433 22222333333344556667888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCcccccccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCC
Q 001411 793 ALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQS 872 (1082)
Q Consensus 793 ~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~s 872 (1082)
...|.+..+..|..++..+...++..+-..+. ..|.-..|+++||.|+|+. ..--+..||++|++||.|-|+|.|
T Consensus 284 gilP~l~~AqvA~~kiakle~~~~~a~~~~~q---~~p~~~~lelrnvrfay~~--~~FhvgPiNl~ikrGelvFliG~N 358 (546)
T COG4615 284 GILPTLLTAQVAFNKIAKLELAPYKADFPRPQ---AFPDWKTLELRNVRFAYQD--NAFHVGPINLTIKRGELVFLIGGN 358 (546)
T ss_pred hhhhHHHHHHHHHHHHHHhhcCCccccCCCCC---cCCcccceeeeeeeeccCc--ccceecceeeEEecCcEEEEECCC
Confidence 88999999999999998875533322211111 1122346999999999973 224578899999999999999999
Q ss_pred CCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcH
Q 001411 873 GSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANA 952 (1082)
Q Consensus 873 GSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l 952 (1082)
||||||++++|.|+|.|++|+|++||.+++.-+++++|+-++-|+-|-+||+.++- + ...++.+.+..-+++..+
T Consensus 359 GsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll~----~-e~~as~q~i~~~LqrLel 433 (546)
T COG4615 359 GSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLLG----P-EGKASPQLIEKWLQRLEL 433 (546)
T ss_pred CCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhhC----C-ccCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999997651 1 122677777666666555
Q ss_pred HHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEec
Q 001411 953 HGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAH 1030 (1082)
Q Consensus 953 ~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaH 1030 (1082)
..... +.+| ... ...||-|||.|+|+--|++-+.+|+++||=-+--||.=++...+.+-... .|+|++.|||
T Consensus 434 ~~kts-l~d~---~fs--~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsH 507 (546)
T COG4615 434 AHKTS-LNDG---RFS--NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISH 507 (546)
T ss_pred hhhhc-ccCC---ccc--ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEec
Confidence 44322 1111 111 24699999999999999999999999999999999999999888876544 4999999999
Q ss_pred CchhhhccCEEEEEeCCEEEEe
Q 001411 1031 RLSTIRNADKIAVLQQGKVAEI 1052 (1082)
Q Consensus 1031 rl~ti~~~DrI~Vl~~G~ive~ 1052 (1082)
+-.--..|||++.|++|+++|.
T Consensus 508 Dd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 508 DDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred CchhhhhHHHHHHHhcCceeec
Confidence 9999999999999999999985
No 173
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-43 Score=399.16 Aligned_cols=222 Identities=36% Similarity=0.570 Sum_probs=187.5
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHH---Hh
Q 001411 835 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS---LR 910 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR 910 (1082)
|+++||+++|+... +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996211 357999999999999999999999999999999999999999999999999999887654 57
Q ss_pred cceEEEcccCcccc-ccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHH
Q 001411 911 RKIGLVQQEPALFS-TTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 983 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~-gTIreNl~~~~~--~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 983 (1082)
++|+||||++.+|. .|+++|+.++.. ..+. +++.+.++..++.++ ......+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDK-----------ADRYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHHHH
Confidence 89999999999986 699999986421 1222 234444555544433 33344679999999999
Q ss_pred HHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 984 IARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 984 LARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999999986
Q ss_pred hccchHH
Q 001411 1061 KENGIYK 1067 (1082)
Q Consensus 1061 ~~~g~f~ 1067 (1082)
.+...+.
T Consensus 231 ~~~~~~~ 237 (343)
T PRK11153 231 HPKHPLT 237 (343)
T ss_pred CCCcHHH
Confidence 5444343
No 174
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.9e-43 Score=398.89 Aligned_cols=218 Identities=31% Similarity=0.514 Sum_probs=188.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+ +.++|+|+||+|++||+++|+||||||||||+++|.|+.+|++|+|.+||.++.+.++. ++.+
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFG---AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 489999999996 34689999999999999999999999999999999999999999999999999887764 6789
Q ss_pred EEEcccCcccc-ccHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 914 GLVQQEPALFS-TTIYENIKYGNED--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 914 ~~VpQdp~Lf~-gTIreNl~~~~~~--~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
+||+|++.+|+ .|+++|+.++... .+ ++.+.++++..++.++. .....+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSE-----------RKYPGQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchh-----------hCChhhCCHHHHHHHHHHH
Confidence 99999999996 6999999976321 12 23344555555554443 3445689999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhcc
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKEN 1063 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~~ 1063 (1082)
||+++|++||||||||+||..+.+.+++.|++..+ +.|+|+|||+++.+.. ||||+||++|+++++|+|+++.+++.
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~ 227 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPA 227 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998754 7899999999999855 99999999999999999999998766
Q ss_pred chHH
Q 001411 1064 GIYK 1067 (1082)
Q Consensus 1064 g~f~ 1067 (1082)
..|.
T Consensus 228 ~~~~ 231 (353)
T TIGR03265 228 TPFV 231 (353)
T ss_pred CHHH
Confidence 5553
No 175
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-43 Score=382.83 Aligned_cols=224 Identities=33% Similarity=0.527 Sum_probs=190.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCCC--CCH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRT--LNL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~~ 906 (1082)
.|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYT---DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeC---CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 599999999996 34699999999999999999999999999999999999997 48999999998853 345
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCCC---CC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNED---AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~---~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
..+|++++|+||++.+|+.|+++|+.++... .+ ++.+.++++.+++.+.+ ++.+++ ...+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNT----NALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhC----CcccCCHHHH
Confidence 6788999999999999999999999864211 11 23455666666664333 233444 4567999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998767899999999999865 999999999999999999999
Q ss_pred hhhccchHH
Q 001411 1059 LRKENGIYK 1067 (1082)
Q Consensus 1059 l~~~~g~f~ 1067 (1082)
.+++...|.
T Consensus 237 ~~~~~~~~~ 245 (254)
T PRK14273 237 FFNPKNTKT 245 (254)
T ss_pred HhCCCChHH
Confidence 865544443
No 176
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-43 Score=386.26 Aligned_cols=213 Identities=32% Similarity=0.554 Sum_probs=187.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999962 34699999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEcccC--ccccccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHH
Q 001411 914 GLVQQEP--ALFSTTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 985 (1082)
Q Consensus 914 ~~VpQdp--~Lf~gTIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLA 985 (1082)
+||||+| .+|..|+++|+.++.. ..+ ++++.++++.+++.++..+.| ..||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999998 6888999999987521 122 234667777777766554433 47999999999999
Q ss_pred HHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHHh
Q 001411 986 RAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 986 RAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
|||+++|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+. .||||++|++|++++.|+++++.
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 99999999999999999999999999999999875 4789999999999985 59999999999999999997654
No 177
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.1e-43 Score=397.35 Aligned_cols=208 Identities=33% Similarity=0.544 Sum_probs=181.5
Q ss_pred CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHH----hcceEEEcccCcccc
Q 001411 849 DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSL----RRKIGLVQQEPALFS 924 (1082)
Q Consensus 849 ~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l----R~~i~~VpQdp~Lf~ 924 (1082)
+.++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.|||.++...+...+ |++++||||++.+|+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 3469999999999999999999999999999999999999999999999999999998887 789999999999997
Q ss_pred -ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEe
Q 001411 925 -TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLL 997 (1082)
Q Consensus 925 -gTIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlL 997 (1082)
.|+++|+.++.. ..+ .+.+.++++.+++.++..+ ...+||||||||++|||||+++|+||||
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~-----------~p~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHR-----------YPDELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhC-----------ChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 599999987532 112 2445666777776655444 3457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHHhhhccchHH
Q 001411 998 DEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLRKENGIYK 1067 (1082)
Q Consensus 998 DEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~ 1067 (1082)
|||||+||+.+.+.+++.+.+.. .++|+|+|||+++.+. .||||++|++|++++.|+|+++++++...|.
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~ 226 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYV 226 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHH
Confidence 99999999999999999999874 3799999999999875 4999999999999999999999876544443
No 178
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-43 Score=380.75 Aligned_cols=214 Identities=33% Similarity=0.550 Sum_probs=180.9
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCH---HHHhhh
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL---KWLREQ 282 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~~~~ 282 (1082)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++.
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 468999999974 349999999999999999999999999999999999999999999999999877654 567888
Q ss_pred ceEEccCCCcChh-cHHHHHhcCCC---CCCHH----HHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 001411 283 MGLVSQEPALFAT-SIANNILLGKE---DASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 354 (1082)
Q Consensus 283 i~~v~Q~~~l~~~-ti~~ni~~g~~---~~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~l 354 (1082)
|+|++|++.+|+. |++||+.++.. ..+.+ ++.++++.. |+.........+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgG~~qrv~i 147 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAV-----------GLRGAEDLYPAELSGGMKKRVAL 147 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHHHHHHHH
Confidence 9999999999986 99999987632 11222 223333333 33333344556899999999999
Q ss_pred HHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhc
Q 001411 355 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 355 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
||||+.+|+++||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 148 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 148 ARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999999999998753 7899999999998765 999999999999999999887654
Q ss_pred C
Q 001411 432 G 432 (1082)
Q Consensus 432 ~ 432 (1082)
.
T Consensus 228 ~ 228 (235)
T cd03261 228 D 228 (235)
T ss_pred C
Confidence 3
No 179
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-43 Score=382.64 Aligned_cols=222 Identities=34% Similarity=0.568 Sum_probs=190.4
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCccCCC--C
Q 001411 832 KGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--L 904 (1082)
Q Consensus 832 ~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i 904 (1082)
.+.|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .
T Consensus 11 ~~~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYG---KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeC---CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 45799999999996 3469999999999999999999999999999999999986 579999999999863 4
Q ss_pred CHHHHhcceEEEcccCccccccHHHHhccCCC---CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChh
Q 001411 905 NLRSLRRKIGLVQQEPALFSTTIYENIKYGNE---DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGG 977 (1082)
Q Consensus 905 ~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~---~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgG 977 (1082)
+...+|++++|+||+|.+|+.|+++|+.++.. ..+ +++++++++.+++.+.+. ........+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHH
Confidence 56678999999999999999999999986422 122 234566667666543322 2344556789999
Q ss_pred HHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChH
Q 001411 978 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHE 1056 (1082)
Q Consensus 978 QrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~ 1056 (1082)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988667899999999999865 9999999999999999999
Q ss_pred HHhhhcc
Q 001411 1057 QLLRKEN 1063 (1082)
Q Consensus 1057 eLl~~~~ 1063 (1082)
++...+.
T Consensus 241 ~~~~~~~ 247 (260)
T PRK10744 241 TIFTKPA 247 (260)
T ss_pred HHHhCCC
Confidence 9986433
No 180
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=7.2e-43 Score=380.72 Aligned_cols=222 Identities=34% Similarity=0.571 Sum_probs=188.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----ccEEEECCccCCCC--CHH
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPI-----SGTVLIDGYDIRTL--NLR 907 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~i--~~~ 907 (1082)
|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYG---EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEEC---CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 78999999996 346999999999999999999999999999999999999998 99999999998763 456
Q ss_pred HHhcceEEEcccCccccccHHHHhccCCC--C-CC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 908 SLRRKIGLVQQEPALFSTTIYENIKYGNE--D-AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 908 ~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~-~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
.+|++++|+||++.+|+.|+++|+.++.. . .+ ++++.++++.+++.+++. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 77899999999999999999999986421 1 11 234556666666653321 1223445679999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHh
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999865 9999999999999999999998
Q ss_pred hhccchH
Q 001411 1060 RKENGIY 1066 (1082)
Q Consensus 1060 ~~~~g~f 1066 (1082)
+.+...+
T Consensus 232 ~~~~~~~ 238 (247)
T TIGR00972 232 TNPKEKR 238 (247)
T ss_pred hCCCChH
Confidence 6544443
No 181
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-43 Score=388.66 Aligned_cols=217 Identities=34% Similarity=0.575 Sum_probs=184.5
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCC--HHHHh
Q 001411 835 IELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN--LRSLR 910 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--~~~lR 910 (1082)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++..+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 88999999997321 146999999999999999999999999999999999999999999999999998754 45788
Q ss_pred cceEEEcccC--ccccccHHHHhccCCC--CCCHH----HHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 911 RKIGLVQQEP--ALFSTTIYENIKYGNE--DASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 911 ~~i~~VpQdp--~Lf~gTIreNl~~~~~--~~~d~----ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
++|+||||+| .+|+.|+++|+.++.. ..+++ .+.++++.+++. +.+........||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 9999999998 5788999999986421 22333 344555555543 00223445578999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHHh
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
+|||||+.+|++|||||||++||+.+.+.+.+.|++..+ +.|||+|||+++.+. .||||++|++|++++.|++++++
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998753 789999999999985 59999999999999999999987
Q ss_pred h
Q 001411 1060 R 1060 (1082)
Q Consensus 1060 ~ 1060 (1082)
+
T Consensus 234 ~ 234 (287)
T PRK13637 234 K 234 (287)
T ss_pred h
Confidence 5
No 182
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=5e-43 Score=379.79 Aligned_cols=216 Identities=31% Similarity=0.550 Sum_probs=183.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHH-hcce
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSL-RRKI 913 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l-R~~i 913 (1082)
|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFG---GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEEC---CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 47899999996 3469999999999999999999999999999999999999999999999999988876654 6789
Q ss_pred EEEcccCccccc-cHHHHhccCCCCCC------------HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 914 GLVQQEPALFST-TIYENIKYGNEDAS------------EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 914 ~~VpQdp~Lf~g-TIreNl~~~~~~~~------------d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
+|+||++.+|++ |+++|+.++..... .++. ...+.+.++.+ |++.........|||||||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~q 150 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREA-----RERAEELLERV--GLADLADRPAGELSYGQQR 150 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHH-----HHHHHHHHHHc--CccchhhCChhhCCHHHHH
Confidence 999999999986 99999986532110 1111 11223444443 4554555566789999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
|++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 151 RLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEV 230 (236)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHh
Confidence 9999999999999999999999999999999999999875 58899999999999966 999999999999999999998
Q ss_pred hh
Q 001411 1059 LR 1060 (1082)
Q Consensus 1059 l~ 1060 (1082)
..
T Consensus 231 ~~ 232 (236)
T cd03219 231 RN 232 (236)
T ss_pred cc
Confidence 75
No 183
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-43 Score=377.80 Aligned_cols=212 Identities=33% Similarity=0.561 Sum_probs=181.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++||+++|+ +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 3 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFG---DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEEC---CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 78999999996 3469999999999999999999999999999999999999999999999999876553 367899
Q ss_pred EEcccCcccc-ccHHHHhccCCCCC------C----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHH
Q 001411 915 LVQQEPALFS-TTIYENIKYGNEDA------S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 983 (1082)
Q Consensus 915 ~VpQdp~Lf~-gTIreNl~~~~~~~------~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 983 (1082)
|+||+|.+|. .|+++|+.++.... + ++++.++++..++.++. .....+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLA-----------DRYPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhh-----------hcChhhCCHHHHHHHH
Confidence 9999999986 59999998753211 1 12344455555554333 3344679999999999
Q ss_pred HHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 984 IARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 984 LARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999998765 99999999999999999999976
Q ss_pred hc
Q 001411 1061 KE 1062 (1082)
Q Consensus 1061 ~~ 1062 (1082)
.+
T Consensus 227 ~~ 228 (239)
T cd03296 227 HP 228 (239)
T ss_pred CC
Confidence 43
No 184
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-43 Score=381.95 Aligned_cols=220 Identities=32% Similarity=0.565 Sum_probs=188.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCccCCC--CCH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LNL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 906 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 6 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYG---DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEEC---CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 499999999996 3469999999999999999999999999999999999975 589999999999865 345
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCC--C-----CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNE--D-----ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~-----~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
..+|++++|+||++.+|+.|+++|+.++.. . ..++++.++++.+++.+.+.. .......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHH
Confidence 678899999999999999999999986421 1 113456666777766544322 23445678999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667899999999999865 999999999999999999999
Q ss_pred hhhcc
Q 001411 1059 LRKEN 1063 (1082)
Q Consensus 1059 l~~~~ 1063 (1082)
.+.+.
T Consensus 236 ~~~~~ 240 (253)
T PRK14242 236 FTRPR 240 (253)
T ss_pred HcCCC
Confidence 86433
No 185
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-43 Score=390.70 Aligned_cols=221 Identities=25% Similarity=0.466 Sum_probs=186.5
Q ss_pred CcEEEEEEEEECCCCC---CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCC------
Q 001411 204 GQIEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL------ 274 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~---~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~------ 274 (1082)
..|+++|++|+|++.. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 3599999999997421 3499999999999999999999999999999999999999999999999998643
Q ss_pred ----------CHHHHhhhceEEccCC--CcChhcHHHHHhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCcc-ccccC
Q 001411 275 ----------QLKWLREQMGLVSQEP--ALFATSIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQ-TQVGE 339 (1082)
Q Consensus 275 ----------~~~~~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~g~ 339 (1082)
....+|+.|+||+|+| ++|+.|++|||.++... .+.++..+ . +.+.++.+ |++ ...++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~---~--~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK---L--AKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH---H--HHHHHHHc--CCChhHhcC
Confidence 3456788999999998 78999999999987421 22222211 1 12334444 554 45677
Q ss_pred CCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccc-ccCCEEEEEeCC
Q 001411 340 GGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTV-RDVDTIMVLKNG 417 (1082)
Q Consensus 340 ~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~-~~~d~i~~l~~G 417 (1082)
.+.+||||||||++|||||+.+|++|||||||++||+.+++.+.+.|.++. +++|+|+|||+++.+ +.||+|++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 888999999999999999999999999999999999999999999998874 478999999999987 469999999999
Q ss_pred EEEEecCchhhhhc
Q 001411 418 QVVESGTHVDLISK 431 (1082)
Q Consensus 418 ~i~~~g~~~~l~~~ 431 (1082)
++++.|+++++...
T Consensus 253 ~i~~~g~~~~~~~~ 266 (320)
T PRK13631 253 KILKTGTPYEIFTD 266 (320)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999988764
No 186
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-43 Score=379.78 Aligned_cols=213 Identities=36% Similarity=0.576 Sum_probs=182.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCC---HHHHhc
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN---LRSLRR 911 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---~~~lR~ 911 (1082)
++++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|+
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999963 246999999999999999999999999999999999999999999999999998876 456888
Q ss_pred ceEEEcccCcccc-ccHHHHhccCCCC--------------CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCCh
Q 001411 912 KIGLVQQEPALFS-TTIYENIKYGNED--------------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSG 976 (1082)
Q Consensus 912 ~i~~VpQdp~Lf~-gTIreNl~~~~~~--------------~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSg 976 (1082)
+++|+||++.+|. .|+++|+.++... ..++++.++++..++.+ .....+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLD-----------KAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChh-----------hhCCCcccCCH
Confidence 9999999999887 6999999764211 11223444444444433 33445578999
Q ss_pred hHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhh-ccCEEEEEeCCEEEEec
Q 001411 977 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 977 GQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G 1053 (1082)
|||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 99999999999999999999999999999999999999999875 3789999999999997 59999999999999999
Q ss_pred ChHHHhh
Q 001411 1054 SHEQLLR 1060 (1082)
Q Consensus 1054 ~~~eLl~ 1060 (1082)
+++++.+
T Consensus 228 ~~~~~~~ 234 (241)
T cd03256 228 PPAELTD 234 (241)
T ss_pred CHHHhhH
Confidence 9999743
No 187
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.1e-42 Score=374.50 Aligned_cols=218 Identities=52% Similarity=0.869 Sum_probs=195.9
Q ss_pred CCCcEEEEEEEEECCCCC-CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHh
Q 001411 202 LAGQIEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLR 280 (1082)
Q Consensus 202 ~~~~i~~~~v~~~y~~~~-~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~ 280 (1082)
..+.++++|++++|+++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...++
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 346799999999997532 3599999999999999999999999999999999999999999999999998777777778
Q ss_pred hhceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhccc
Q 001411 281 EQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLR 360 (1082)
Q Consensus 281 ~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~ 360 (1082)
+.++|++|++.+|+.|++||+.++.......++.+.+....+.+.++.+|.|+++.+.+...+||||||||++|||||+.
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 89999999999999999999998755444444555555567778899999999999999999999999999999999999
Q ss_pred CCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEE
Q 001411 361 NPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQV 419 (1082)
Q Consensus 361 ~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i 419 (1082)
+|+++||||||++||+.+...+.+.++++.+++|+|++||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999988777899999999999988999999999874
No 188
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=9.7e-43 Score=397.92 Aligned_cols=221 Identities=28% Similarity=0.519 Sum_probs=194.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.+++...+|++|
T Consensus 3 ~L~~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 489999999996 45799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccCcc-ccccHHHHhccCCC----------CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 914 GLVQQEPAL-FSTTIYENIKYGNE----------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 914 ~~VpQdp~L-f~gTIreNl~~~~~----------~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
+||||++.+ |+.|+++|+.++.. ..+.+.+.++++.+++.++..+ ...+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~-----------~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADR-----------PVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHH
Confidence 999999987 67899999987531 1123457778888888765433 2357999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHHhh
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
+|||||+++|+||||||||++||+.+...+++.|+++. +++|+|+++|+++.+. .||||++|++|++++.|+|++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999875 4789999999999995 599999999999999999999885
Q ss_pred hccchHHHHH
Q 001411 1061 KENGIYKQLI 1070 (1082)
Q Consensus 1061 ~~~g~f~~l~ 1070 (1082)
. ..+.+++
T Consensus 229 ~--~~l~~~~ 236 (402)
T PRK09536 229 A--DTLRAAF 236 (402)
T ss_pred c--HHHHHHh
Confidence 2 3444444
No 189
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=9.2e-43 Score=394.76 Aligned_cols=217 Identities=32% Similarity=0.543 Sum_probs=187.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++|++++|+ +.++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++|
T Consensus 2 ~L~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFG---RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 388999999996 3469999999999999999999999999999999999999999999999999987654 46789
Q ss_pred EEEcccCccccc-cHHHHhccCCC------CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 914 GLVQQEPALFST-TIYENIKYGNE------DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 914 ~~VpQdp~Lf~g-TIreNl~~~~~------~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
+||||++.+|+. |+++|+.++.. ..+ ++.+.++++..++.++..+ ....||||||||+
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LSgGq~QRv 145 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADR-----------YPAQLSGGQKQRV 145 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHH
Confidence 999999999974 99999987632 112 2345556666666544333 3357999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHh
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
+|||||+++|++||||||||+||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|+|++.|+|+++.
T Consensus 146 alArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 146 ALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999998754 7899999999999865 9999999999999999999998
Q ss_pred hhccchH
Q 001411 1060 RKENGIY 1066 (1082)
Q Consensus 1060 ~~~~g~f 1066 (1082)
+++...|
T Consensus 226 ~~p~~~~ 232 (353)
T PRK10851 226 REPATRF 232 (353)
T ss_pred hCccchH
Confidence 7655444
No 190
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-42 Score=384.23 Aligned_cols=215 Identities=33% Similarity=0.584 Sum_probs=189.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...++++|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 48999999999632 34699999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEcccC--ccccccHHHHhccCCCC--CCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHH
Q 001411 914 GLVQQEP--ALFSTTIYENIKYGNED--ASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 985 (1082)
Q Consensus 914 ~~VpQdp--~Lf~gTIreNl~~~~~~--~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLA 985 (1082)
+|+||+| .+++.|+++||.++... .+. +.+.++++..++.+++.+.| ..||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 46678999999875211 222 34566677777766655443 47999999999999
Q ss_pred HHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhh
Q 001411 986 RAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 986 RAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFK 229 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999999999998763 789999999999998899999999999999999999875
No 191
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.4e-42 Score=394.77 Aligned_cols=217 Identities=35% Similarity=0.603 Sum_probs=191.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++|++++|+ +.++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++..++.. ++++
T Consensus 14 ~L~l~~l~~~~~---~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFD---GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEEC---CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 599999999996 34699999999999999999999999999999999999999999999999999887764 5789
Q ss_pred EEEcccCccccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 914 GLVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 914 ~~VpQdp~Lf~g-TIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
+||+|++.+|+. |+++||.++.. ..+ ++++.++++..++.++..+.| .+||||||||++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999975 99999987632 122 234566777777777665554 579999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhcc
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKEN 1063 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~~ 1063 (1082)
||+++|++||||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+|+++.+++.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~ 237 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPK 237 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998764 7899999999999754 99999999999999999999988665
Q ss_pred chH
Q 001411 1064 GIY 1066 (1082)
Q Consensus 1064 g~f 1066 (1082)
..|
T Consensus 238 ~~~ 240 (375)
T PRK09452 238 NLF 240 (375)
T ss_pred cHH
Confidence 544
No 192
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=7.6e-43 Score=374.15 Aligned_cols=211 Identities=31% Similarity=0.530 Sum_probs=180.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++||+++|+.. ..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.... ..+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 5789999999631 156999999999999999999999999999999999999999999999999987643 66788999
Q ss_pred EEcccCccc-cccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALF-STTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf-~gTIreNl~~~~~--~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||++.+| ..|+++|+.++.. ..+. +++.++++..++.+.. ++ ...+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~----~~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-------NK----RARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-------hC----hhhhCCHHHHHHHHHHHH
Confidence 999999998 5799999976321 1121 2344555555554332 22 335799999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
++++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999999988777999999999999965 999999999999999999875
No 193
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-42 Score=385.85 Aligned_cols=216 Identities=25% Similarity=0.487 Sum_probs=183.1
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCC----CCHHH
Q 001411 835 IELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRT----LNLRS 908 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~----i~~~~ 908 (1082)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997321 1369999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcceEEEcccC--ccccccHHHHhccCCCC--CCHH----HHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 909 LRRKIGLVQQEP--ALFSTTIYENIKYGNED--ASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 909 lR~~i~~VpQdp--~Lf~gTIreNl~~~~~~--~~d~----ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
+|++++||+|+| .+|+.|+.+|+.++... .+.+ ++.++++.+++.+ ........+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~----------~~~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLAD----------EFWEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhccCCcccCCHHHHH
Confidence 899999999998 79999999999875321 2222 2344455555421 1123445689999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHH
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
|++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .||||++|++|++++.|+|+++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998865 4789999999999885 5999999999999999999998
Q ss_pred hh
Q 001411 1059 LR 1060 (1082)
Q Consensus 1059 l~ 1060 (1082)
..
T Consensus 232 ~~ 233 (288)
T PRK13643 232 FQ 233 (288)
T ss_pred Hc
Confidence 75
No 194
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-43 Score=386.94 Aligned_cols=220 Identities=32% Similarity=0.562 Sum_probs=185.1
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCC----CHHH
Q 001411 835 IELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL----NLRS 908 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~~ 908 (1082)
|+++||+++|+..+ ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 88999999996322 24699999999999999999999999999999999999999999999999999754 3467
Q ss_pred HhcceEEEcccC--ccccccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhhCcccccc-cccCCCCCCChhHHHHHH
Q 001411 909 LRRKIGLVQQEP--ALFSTTIYENIKYGNE--DASEIELMKATKAANAHGFISRMPEGYQS-HVGDRGVQLSGGQKQRVA 983 (1082)
Q Consensus 909 lR~~i~~VpQdp--~Lf~gTIreNl~~~~~--~~~d~ei~~al~~a~l~~~i~~lp~gldt-~v~e~G~~LSgGQrQrla 983 (1082)
+|++|+||||+| .+|+.|+.+|+.++.. ..+.++..+. +.+.++.+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 899999999998 5888999999987521 1233333221 12333333 5553 334567889999999999
Q ss_pred HHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHHhh
Q 001411 984 IARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 984 LARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+. .||||++|++|++++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999874 4799999999999985 599999999999999999999876
Q ss_pred h
Q 001411 1061 K 1061 (1082)
Q Consensus 1061 ~ 1061 (1082)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 3
No 195
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-42 Score=376.17 Aligned_cols=215 Identities=37% Similarity=0.585 Sum_probs=183.5
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHH---HHh
Q 001411 835 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SLR 910 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR 910 (1082)
|+++|++++|+.+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996321 12799999999999999999999999999999999999999999999999999877654 357
Q ss_pred cceEEEcccCcccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHH
Q 001411 911 RKIGLVQQEPALFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 983 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~-gTIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 983 (1082)
++++|+||+|.+|. .|+++|+.++.. ..+ .+++.++++..++.+... ....+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKAD-----------AYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhh-----------cChhhCCHHHHHHHH
Confidence 89999999999997 699999976421 111 234555566655544433 334679999999999
Q ss_pred HHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-C-CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 984 IARAILKNPSILLLDEATSALDTASENLIQEALDKLM-E-GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 984 LARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~-~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
||||++++|++|||||||++||+.+.+.+.+.|++.. + ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999999999999875 3 7899999999999865 99999999999999999998875
No 196
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1e-42 Score=394.74 Aligned_cols=218 Identities=30% Similarity=0.485 Sum_probs=188.6
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCc--cEEEECCccCCCCCHHHHh
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPIS--GTVLIDGYDIRTLNLRSLR 910 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~--G~I~idG~di~~i~~~~lR 910 (1082)
|.|+++||+++|+ +.++|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++...+. .+
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYG---ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEEC---CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 5799999999996 3469999999999999999999999999999999999999999 999999999987665 36
Q ss_pred cceEEEcccCccccc-cHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHH
Q 001411 911 RKIGLVQQEPALFST-TIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 983 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~g-TIreNl~~~~~--~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 983 (1082)
++|+||+|++.+|+. |+++||.++.. ..+. +.+.++++.+++.++..+. ..+||||||||++
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~-----------~~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHL-----------PAQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCC-----------hhhCCHHHHHHHH
Confidence 789999999999976 99999987532 1222 2345556666665544433 3579999999999
Q ss_pred HHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC---CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHh
Q 001411 984 IARAILKNPSILLLDEATSALDTASENLIQEALDKLME---GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 984 LARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~---~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
|||||+++|++||||||||+||+.+...+++.|++..+ +.|+|+|||+++.+.. ||||+||++|++++.|+|+++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999998754 6899999999999855 9999999999999999999998
Q ss_pred hhccchH
Q 001411 1060 RKENGIY 1066 (1082)
Q Consensus 1060 ~~~~g~f 1066 (1082)
+++...|
T Consensus 228 ~~p~~~~ 234 (362)
T TIGR03258 228 DAPADGF 234 (362)
T ss_pred hCcCcHH
Confidence 8665544
No 197
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.2e-42 Score=373.20 Aligned_cols=217 Identities=30% Similarity=0.463 Sum_probs=180.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHH-hcce
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSL-RRKI 913 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l-R~~i 913 (1082)
|+++||+++|+ +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYG---KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecC---CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 57899999996 3469999999999999999999999999999999999999999999999999988876654 6789
Q ss_pred EEEcccCccccc-cHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCC
Q 001411 914 GLVQQEPALFST-TIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP 992 (1082)
Q Consensus 914 ~~VpQdp~Lf~g-TIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~ 992 (1082)
+|+||++.+|++ |+++|+.++.......+..+.+ .+.++.++ +++.........||||||||++||||++++|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARL-----ERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHH-----HHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 9999998753322111111111 11122111 1222333455679999999999999999999
Q ss_pred CEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 993 SILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 993 ~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999875 47899999999999865 99999999999999999988764
No 198
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-42 Score=380.56 Aligned_cols=225 Identities=31% Similarity=0.473 Sum_probs=188.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCC--CCCH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIR--TLNL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~--~i~~ 906 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYG---SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeC---CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 489999999996 34699999999999999999999999999999999999987 4999999999987 4566
Q ss_pred HHHhcceEEEcccCccccc-cHHHHhccCCC--C--CC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChh
Q 001411 907 RSLRRKIGLVQQEPALFST-TIYENIKYGNE--D--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGG 977 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~g-TIreNl~~~~~--~--~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgG 977 (1082)
..+|++++|+||++.+|++ |+++|+.++.. . .+ ++.+.++++..++.+.+. ........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccChhhCCHH
Confidence 6788999999999999975 99999976421 1 01 234555666666543322 1233455789999
Q ss_pred HHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChH
Q 001411 978 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHE 1056 (1082)
Q Consensus 978 QrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~ 1056 (1082)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998667999999999999865 9999999999999999999
Q ss_pred HHhhhccchHHH
Q 001411 1057 QLLRKENGIYKQ 1068 (1082)
Q Consensus 1057 eLl~~~~g~f~~ 1068 (1082)
++.+.+...|.+
T Consensus 234 ~~~~~~~~~~~~ 245 (253)
T PRK14267 234 KVFENPEHELTE 245 (253)
T ss_pred HHHhCCCcHHHH
Confidence 998643333433
No 199
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.4e-42 Score=378.14 Aligned_cols=212 Identities=34% Similarity=0.554 Sum_probs=181.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCH---HHHhc
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL---RSLRR 911 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~ 911 (1082)
|+++||+++|+ .+.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++. ..+|+
T Consensus 2 l~~~~l~~~~~--~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYP--NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecC--CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 78999999996 13469999999999999999999999999999999999999999999999999987654 34788
Q ss_pred ceEEEcccCcccc-ccHHHHhccCCCC--------------CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCCh
Q 001411 912 KIGLVQQEPALFS-TTIYENIKYGNED--------------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSG 976 (1082)
Q Consensus 912 ~i~~VpQdp~Lf~-gTIreNl~~~~~~--------------~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSg 976 (1082)
+++|+||++.+|. .|+++|+.++... ..++++.++++..++.++ ......+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADK-----------AYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhh-----------hcCCcccCCH
Confidence 9999999999886 6999999764211 012234444555544333 3345568999
Q ss_pred hHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 001411 977 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 977 GQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1053 (1082)
|||||++|||||+++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999874 27899999999999865 9999999999999999
Q ss_pred ChHHHh
Q 001411 1054 SHEQLL 1059 (1082)
Q Consensus 1054 ~~~eLl 1059 (1082)
+++++.
T Consensus 229 ~~~~~~ 234 (243)
T TIGR02315 229 APSELD 234 (243)
T ss_pred CHHHhC
Confidence 999874
No 200
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-42 Score=394.49 Aligned_cols=213 Identities=31% Similarity=0.516 Sum_probs=184.9
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++|++++|++ ...+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|+++.+.++. ++.||
T Consensus 3 ~l~i~~l~~~~~~-~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDG-KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCC-CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 3899999999942 23599999999999999999999999999999999999999999999999999877654 46899
Q ss_pred EEccCCCcChh-cHHHHHhcCCCC--CC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHh
Q 001411 285 LVSQEPALFAT-SIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 357 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARa 357 (1082)
||+|++.+|+. ||+|||.|+... .+ .+++.++++..++.++.++.| .+|||||||||+||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalARA 148 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGRA 148 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999975 999999987532 11 234556666666655555544 5899999999999999
Q ss_pred cccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 358 VLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 358 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|+.+|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++..+
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 149 IVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999988754 689999999999775 5999999999999999999998765
No 201
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-42 Score=381.37 Aligned_cols=223 Identities=30% Similarity=0.542 Sum_probs=190.3
Q ss_pred ccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCCC--
Q 001411 831 IKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRT-- 903 (1082)
Q Consensus 831 ~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~-- 903 (1082)
..+.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++..
T Consensus 16 ~~~~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~ 92 (267)
T PRK14235 16 TEIKMRARDVSVFYG---EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPR 92 (267)
T ss_pred CCceEEEEeEEEEEC---CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccc
Confidence 345799999999996 34699999999999999999999999999999999999975 89999999999875
Q ss_pred CCHHHHhcceEEEcccCccccccHHHHhccCCC--CC--C----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCC
Q 001411 904 LNLRSLRRKIGLVQQEPALFSTTIYENIKYGNE--DA--S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 975 (1082)
Q Consensus 904 i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~~--~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LS 975 (1082)
.+...+|++++|+||+|.+|+.|+++|+.++.. .. + ++++.++++.+++.+++. ......+.+||
T Consensus 93 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS 165 (267)
T PRK14235 93 LDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLS 165 (267)
T ss_pred cchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCC
Confidence 345678899999999999999999999986421 10 1 234566677776654332 12334557899
Q ss_pred hhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecC
Q 001411 976 GGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGS 1054 (1082)
Q Consensus 976 gGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~ 1054 (1082)
||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|+++++|+
T Consensus 166 gGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~ 245 (267)
T PRK14235 166 GGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGD 245 (267)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999987667899999999999965 99999999999999999
Q ss_pred hHHHhhhcc
Q 001411 1055 HEQLLRKEN 1063 (1082)
Q Consensus 1055 ~~eLl~~~~ 1063 (1082)
++++..++.
T Consensus 246 ~~~~~~~~~ 254 (267)
T PRK14235 246 TEKMFTNPD 254 (267)
T ss_pred HHHHHhCCC
Confidence 999986433
No 202
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=9.5e-43 Score=375.11 Aligned_cols=212 Identities=34% Similarity=0.552 Sum_probs=179.1
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCC-----CCCCcEEEECCeeCCCCC--HHH
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLY-----EPTSGKILLDGHDLKSLQ--LKW 278 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~-----~~~~G~i~~~g~~~~~~~--~~~ 278 (1082)
|+++|++++|+++ ++|+|+||++++||+++|+||||||||||+++|+|++ +|++|+|.++|+++...+ ...
T Consensus 1 i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGDK--HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCCc--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 4789999999753 4999999999999999999999999999999999999 999999999999987766 556
Q ss_pred HhhhceEEccCCCcChhcHHHHHhcCCCCC---C----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHH
Q 001411 279 LREQMGLVSQEPALFATSIANNILLGKEDA---S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 351 (1082)
Q Consensus 279 ~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqr 351 (1082)
+++.++|++|++.+|+.|++||+.++.... . .+++.++++..++.+.+.+.++ +.+||||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~qr 149 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQR 149 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHHH
Confidence 788899999999999779999998753211 1 2234444554444333322210 46899999999
Q ss_pred HHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhh
Q 001411 352 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDL 428 (1082)
Q Consensus 352 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 428 (1082)
++|||||+.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 150 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 150 LCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 9999999999999999999999999999999999998865589999999999876 5999999999999999987654
No 203
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-42 Score=382.32 Aligned_cols=216 Identities=33% Similarity=0.554 Sum_probs=188.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743234699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEcccC--ccccccHHHHhccCCC--CCCHHH----HHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHH
Q 001411 914 GLVQQEP--ALFSTTIYENIKYGNE--DASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 985 (1082)
Q Consensus 914 ~~VpQdp--~Lf~gTIreNl~~~~~--~~~d~e----i~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLA 985 (1082)
+|+||+| .++..|+.+||.++.. ..++++ +.++++.+++.++..+ ....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTR-----------EPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHHHHHH
Confidence 9999998 4678899999986421 223333 4556666666555433 3367999999999999
Q ss_pred HHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhh
Q 001411 986 RAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 986 RAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|+++++++
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFA 229 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999998753 789999999999998899999999999999999999876
No 204
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=6.4e-43 Score=373.48 Aligned_cols=203 Identities=33% Similarity=0.570 Sum_probs=174.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHH---HHhc
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SLRR 911 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR~ 911 (1082)
|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999632 24699999999999999999999999999999999999999999999999998876543 4788
Q ss_pred ceEEEcccCcccc-ccHHHHhccCCC------CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHH
Q 001411 912 KIGLVQQEPALFS-TTIYENIKYGNE------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 912 ~i~~VpQdp~Lf~-gTIreNl~~~~~------~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaL 984 (1082)
+++|+||+|.+|. .|++||+.++.. ...++++.++++..++.++..+.| .+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999887 599999986411 112345667777777765544332 5799999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEE
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKV 1049 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~i 1049 (1082)
||||+++|+||||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 47899999999999975 999999999985
No 205
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-42 Score=384.09 Aligned_cols=214 Identities=29% Similarity=0.508 Sum_probs=185.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCC--CCCHHHHhc
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIR--TLNLRSLRR 911 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~--~i~~~~lR~ 911 (1082)
.|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999962 346999999999999999999999999999999999999999999999999984 344667899
Q ss_pred ceEEEcccC--ccccccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHH
Q 001411 912 KIGLVQQEP--ALFSTTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 983 (1082)
Q Consensus 912 ~i~~VpQdp--~Lf~gTIreNl~~~~~--~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 983 (1082)
+++|+||+| .+|+.|+++|+.++.. ..+. +.+.++++..++.++ ......+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHL-----------KDKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhCCcccCCHHHHHHHH
Confidence 999999998 5788999999986421 1222 234555566665443 23345789999999999
Q ss_pred HHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHHhh
Q 001411 984 IARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 984 LARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+. .||||++|++|++++.|+++++++
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998753 799999999999997 599999999999999999999876
No 206
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.1e-43 Score=372.27 Aligned_cols=203 Identities=39% Similarity=0.614 Sum_probs=173.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+. .+++++
T Consensus 1 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYG---SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeC---CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 47899999996 3469999999999999999999999999999999999999999999999999876543 577899
Q ss_pred EEcccCcccc-ccHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFS-TTIYENIKYGNED--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~-gTIreNl~~~~~~--~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||+|.+|. .|+++|+.++... .+ ++++.++++..++.++.. ....+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLN-----------RYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------cChhhCCHHHHHHHHHHHH
Confidence 9999999886 6999999764221 11 233455555555544433 3346799999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1053 (1082)
|+++|++|||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999874 37899999999999865 9999999999999875
No 207
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-42 Score=382.44 Aligned_cols=219 Identities=34% Similarity=0.555 Sum_probs=185.5
Q ss_pred EEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHH----hc
Q 001411 836 ELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSL----RR 911 (1082)
Q Consensus 836 ~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l----R~ 911 (1082)
.++||+++|. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ ++
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 4567777775 3468999999999999999999999999999999999999999999999999988765543 46
Q ss_pred ceEEEcccCcccc-ccHHHHhccCCC--CC----CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHH
Q 001411 912 KIGLVQQEPALFS-TTIYENIKYGNE--DA----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 912 ~i~~VpQdp~Lf~-gTIreNl~~~~~--~~----~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaL 984 (1082)
+++|+||++.+|. .|+++|+.++.. .. .++++.++++.+++.+++.+.| .+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHH
Confidence 8999999999885 699999976421 11 1234566677777766554433 4799999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhh
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
||||+++|+||||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999874 37899999999999865 999999999999999999999875
Q ss_pred ccchHHH
Q 001411 1062 ENGIYKQ 1068 (1082)
Q Consensus 1062 ~~g~f~~ 1068 (1082)
+...|.+
T Consensus 252 ~~~~~~~ 258 (269)
T cd03294 252 PANDYVR 258 (269)
T ss_pred cCcHHHH
Confidence 5554544
No 208
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-42 Score=377.07 Aligned_cols=218 Identities=35% Similarity=0.576 Sum_probs=184.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
++++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGG--GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCC--cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 478999999963 146999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcccCcccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~-gTIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||+|.+|+ .|+++|+.++.. ..+ ++++.++++..++.+ +......+.+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHHHH
Confidence 9999999996 699999976421 111 122333444443321 012344557899999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhcc
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKEN 1063 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~~ 1063 (1082)
++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.++..
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 228 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSPA 228 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCCC
Confidence 9999999999999999999999999999998753 7999999999998755 99999999999999999999976433
No 209
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-42 Score=378.72 Aligned_cols=226 Identities=29% Similarity=0.469 Sum_probs=191.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCCCCCHHH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRTLNLRS 908 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i~~~~ 908 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+...
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFG---QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEEC---CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 489999999996 34699999999999999999999999999999999999974 6999999999998888888
Q ss_pred HhcceEEEcccCccc-cccHHHHhccCCC--C--CC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 909 LRRKIGLVQQEPALF-STTIYENIKYGNE--D--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 909 lR~~i~~VpQdp~Lf-~gTIreNl~~~~~--~--~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
+|++|+|+||+|.+| ..|+++|+.++.. . .. ++++.++++.+++.+.+. ..+| ....+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~----~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK---DRLD----APAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh---hhhc----CCcccCCHHHH
Confidence 999999999999755 6799999976421 0 11 234566677776644322 1233 33467999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999999999999999867899999999999986 5999999999999999999999
Q ss_pred hhhccchHHHH
Q 001411 1059 LRKENGIYKQL 1069 (1082)
Q Consensus 1059 l~~~~g~f~~l 1069 (1082)
.+.+...+.+.
T Consensus 233 ~~~~~~~~~~~ 243 (250)
T PRK14247 233 FTNPRHELTEK 243 (250)
T ss_pred HcCCccHHHHH
Confidence 86544444433
No 210
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-42 Score=379.54 Aligned_cols=221 Identities=32% Similarity=0.523 Sum_probs=188.2
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCccCCC--CC
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LN 905 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 905 (1082)
..|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 12 ~~l~i~nl~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYG---TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEEC---CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 4699999999996 3469999999999999999999999999999999999987 589999999999863 56
Q ss_pred HHHHhcceEEEcccCccccccHHHHhccCCCC--C---CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 906 LRSLRRKIGLVQQEPALFSTTIYENIKYGNED--A---SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 906 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~--~---~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
...+|++++|+||+|.+|+.|++||+.++... . .++++.++++.+++...+ +........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDEC-------KDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchh-------hhhhCCCcccCCHHHHH
Confidence 67889999999999999999999999875321 1 133455566666554322 22334455679999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeC-----------CE
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQ-----------GK 1048 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~-----------G~ 1048 (1082)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999988667899999999999865 999999996 67
Q ss_pred EEEecChHHHhhhcc
Q 001411 1049 VAEIGSHEQLLRKEN 1063 (1082)
Q Consensus 1049 ive~G~~~eLl~~~~ 1063 (1082)
++|.|++++++..+.
T Consensus 242 ~~~~~~~~~~~~~~~ 256 (269)
T PRK14259 242 LVEFNETKKIFNSPK 256 (269)
T ss_pred EEEeCCHHHHHhCcC
Confidence 999999999986443
No 211
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-42 Score=392.83 Aligned_cols=212 Identities=32% Similarity=0.540 Sum_probs=184.1
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. ++.|+
T Consensus 6 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 81 (351)
T PRK11432 6 FVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDIC 81 (351)
T ss_pred EEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 5999999999974 3489999999999999999999999999999999999999999999999999876543 56899
Q ss_pred EEccCCCcChh-cHHHHHhcCCCC--CC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHh
Q 001411 285 LVSQEPALFAT-SIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 357 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARa 357 (1082)
||+|++.+|+. |++|||.|+... .+ .+++.++++..++.+..+ .....|||||||||+||||
T Consensus 82 ~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~-----------r~~~~LSgGq~QRVaLARa 150 (351)
T PRK11432 82 MVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFED-----------RYVDQISGGQQQRVALARA 150 (351)
T ss_pred EEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHHHHHH
Confidence 99999999976 999999987431 11 234555566555544433 3446899999999999999
Q ss_pred cccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 358 VLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 358 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|+.+|++||||||||+||+.+...+.+.|+++.+ ++|+|+|||+++.+. .||+|++|++|++++.|+++++..+
T Consensus 151 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 151 LILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred HHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999999998754 789999999999874 5899999999999999999998764
No 212
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=9.4e-42 Score=374.90 Aligned_cols=220 Identities=30% Similarity=0.491 Sum_probs=195.6
Q ss_pred ccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHh
Q 001411 831 IKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLR 910 (1082)
Q Consensus 831 ~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR 910 (1082)
..+.|+++|++++. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||
T Consensus 36 ~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g------------ 98 (282)
T cd03291 36 DDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG------------ 98 (282)
T ss_pred CCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC------------
Confidence 45579999999852 3599999999999999999999999999999999999999999999998
Q ss_pred cceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHcc
Q 001411 911 RKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILK 990 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~ 990 (1082)
+++|+||++.+|++|+++|+.++.. ..+.++.++++.+++.+.+..+|.++++.+++.+.+||||||||++|||||++
T Consensus 99 -~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~ 176 (282)
T cd03291 99 -RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYK 176 (282)
T ss_pred -EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhc
Confidence 3999999999999999999987532 33445667788888889999999999999999999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCHHHHHHHHHHH-HHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhhccchHHHH
Q 001411 991 NPSILLLDEATSALDTASENLIQEAL-DKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQL 1069 (1082)
Q Consensus 991 ~~~ILlLDEaTS~LD~~te~~I~~~l-~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l 1069 (1082)
+|+||||||||++||+++...+.+.+ ++..+++|+|+|||+++.+..||+|++|++|++++.|+++++.+. ...|.+.
T Consensus 177 ~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~~~ 255 (282)
T cd03291 177 DADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDFSSK 255 (282)
T ss_pred CCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHHHHH
Confidence 99999999999999999999888754 555568899999999999988999999999999999999999863 4455544
Q ss_pred H
Q 001411 1070 I 1070 (1082)
Q Consensus 1070 ~ 1070 (1082)
+
T Consensus 256 ~ 256 (282)
T cd03291 256 L 256 (282)
T ss_pred H
Confidence 4
No 213
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-42 Score=395.09 Aligned_cols=217 Identities=33% Similarity=0.539 Sum_probs=186.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++|++++|+ +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .+++|
T Consensus 3 ~l~i~~l~~~~~---~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~--~~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYG---DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPP--AERGV 77 (369)
T ss_pred EEEEEEEEEEeC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--hHCCE
Confidence 389999999996 3469999999999999999999999999999999999999999999999999987665 35789
Q ss_pred EEEcccCccccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 914 GLVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 914 ~~VpQdp~Lf~g-TIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
+||||++.+|+. |+++|+.++.. ..+ ++++.++++..++.++..+ ...+||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~-----------~~~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDR-----------KPKALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcC-----------ChhhCCHHHHHHHHHHH
Confidence 999999999975 99999987532 122 2345566666666554433 33579999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhcc
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKEN 1063 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~~ 1063 (1082)
||+++|++||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++...+.
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~ 226 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPA 226 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998753 7899999999998865 99999999999999999999987655
Q ss_pred chH
Q 001411 1064 GIY 1066 (1082)
Q Consensus 1064 g~f 1066 (1082)
..|
T Consensus 227 ~~~ 229 (369)
T PRK11000 227 NRF 229 (369)
T ss_pred cHH
Confidence 444
No 214
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.2e-42 Score=387.41 Aligned_cols=228 Identities=26% Similarity=0.434 Sum_probs=189.5
Q ss_pred cEEEEeEEEECCCCC----------CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCC
Q 001411 834 NIELRNVSFKYPVRP----------DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRT 903 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~----------~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~ 903 (1082)
-|+++|++++|+.+. ..++++||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999998
Q ss_pred CCHH---HHhcceEEEcccC--ccc-cccHHHHhccCC----CCCCHHH----HHHHHHHhcHHHHHhhCcccccccccC
Q 001411 904 LNLR---SLRRKIGLVQQEP--ALF-STTIYENIKYGN----EDASEIE----LMKATKAANAHGFISRMPEGYQSHVGD 969 (1082)
Q Consensus 904 i~~~---~lR~~i~~VpQdp--~Lf-~gTIreNl~~~~----~~~~d~e----i~~al~~a~l~~~i~~lp~gldt~v~e 969 (1082)
++.. .+|++|+||+|+| .+| ..||.+|+.++. +..+.++ +.++++.+++.+ .....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~----------~~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLP----------NLINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCh----------HHhcC
Confidence 8754 4678999999999 477 479999986421 1233333 334444444421 11233
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeC
Q 001411 970 RGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQ 1046 (1082)
Q Consensus 970 ~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~ 1046 (1082)
...+||||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4567999999999999999999999999999999999999999999998753 7899999999999976 999999999
Q ss_pred CEEEEecChHHHhhhccchHHH-HHH
Q 001411 1047 GKVAEIGSHEQLLRKENGIYKQ-LIR 1071 (1082)
Q Consensus 1047 G~ive~G~~~eLl~~~~g~f~~-l~~ 1071 (1082)
|+|+|.|+++++++++...|.+ ++.
T Consensus 238 G~ive~g~~~~i~~~~~~py~~~l~~ 263 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTKALMS 263 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHHHHHh
Confidence 9999999999998766566765 443
No 215
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-42 Score=384.59 Aligned_cols=216 Identities=31% Similarity=0.510 Sum_probs=182.8
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCC----CCHHH
Q 001411 835 IELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRT----LNLRS 908 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~----i~~~~ 908 (1082)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 88999999996321 1469999999999999999999999999999999999999999999999999863 34667
Q ss_pred HhcceEEEcccC--ccccccHHHHhccCCC--CCCHHH----HHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 909 LRRKIGLVQQEP--ALFSTTIYENIKYGNE--DASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 909 lR~~i~~VpQdp--~Lf~gTIreNl~~~~~--~~~d~e----i~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
.|++++||||+| .+|+.|+++|+.++.. ..+.++ +.++++.+++.+. ........|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEE----------LLARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChh----------hhhCCcccCCHHHHH
Confidence 888999999998 6888999999987522 123332 3344444444311 123345679999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHH
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQ 1057 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~e 1057 (1082)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+ +.|||+|||+++.+. .||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998753 789999999999985 499999999999999999999
Q ss_pred Hhh
Q 001411 1058 LLR 1060 (1082)
Q Consensus 1058 Ll~ 1060 (1082)
+.+
T Consensus 233 ~~~ 235 (290)
T PRK13634 233 IFA 235 (290)
T ss_pred Hhc
Confidence 875
No 216
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-42 Score=381.56 Aligned_cols=216 Identities=36% Similarity=0.577 Sum_probs=186.5
Q ss_pred cEEEEEEEEECCCC-CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhc
Q 001411 205 QIEFSEVCFAYPSR-PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 283 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 283 (1082)
.++++|++++|++. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999742 23499999999999999999999999999999999999999999999999999877777888899
Q ss_pred eEEccCCC--cChhcHHHHHhcCCCC--CC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 001411 284 GLVSQEPA--LFATSIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 355 (1082)
Q Consensus 284 ~~v~Q~~~--l~~~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lA 355 (1082)
+||+|+|. ++..||+|||.++... .+ .+++.++++..++.++.++ ...+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKER-----------EPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHHHHHH
Confidence 99999984 5567999999987432 12 2345555566555544443 3468999999999999
Q ss_pred HhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhc
Q 001411 356 RAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 356 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 7899999999999878999999999999999998887654
No 217
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=3.1e-42 Score=376.92 Aligned_cols=218 Identities=31% Similarity=0.521 Sum_probs=184.7
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCC---------
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN--------- 905 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--------- 905 (1082)
|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFG---ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeC---CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 57999999996 346999999999999999999999999999999999999999999999999987653
Q ss_pred ----HHHHhcceEEEcccCcccc-ccHHHHhccCCC---CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCC
Q 001411 906 ----LRSLRRKIGLVQQEPALFS-TTIYENIKYGNE---DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQ 973 (1082)
Q Consensus 906 ----~~~lR~~i~~VpQdp~Lf~-gTIreNl~~~~~---~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~ 973 (1082)
...+|++++|++|++.+|. .|+++|+.++.. ... ++++.++++..++.++. ......
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKA-----------DHMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHh-----------hcChhh
Confidence 2467889999999999885 799999986311 111 23344555555554433 334467
Q ss_pred CChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEE
Q 001411 974 LSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVA 1050 (1082)
Q Consensus 974 LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv 1050 (1082)
||||||||++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 7899999999999865 9999999999999
Q ss_pred EecChHHHhhhccchH
Q 001411 1051 EIGSHEQLLRKENGIY 1066 (1082)
Q Consensus 1051 e~G~~~eLl~~~~g~f 1066 (1082)
+.|+++++.+.+...+
T Consensus 227 ~~g~~~~~~~~~~~~~ 242 (252)
T TIGR03005 227 EQGKPDEIFRQPKEER 242 (252)
T ss_pred EeCCHHHHhcCCCcHH
Confidence 9999999986544333
No 218
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-42 Score=378.50 Aligned_cols=220 Identities=30% Similarity=0.491 Sum_probs=189.4
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCccCCC--CC
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LN 905 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 905 (1082)
..|+++||+++|+ +.++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYG---KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEEC---CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 4699999999995 3579999999999999999999999999999999999997 579999999999864 34
Q ss_pred HHHHhcceEEEcccCccccccHHHHhccCCCC---CC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhH
Q 001411 906 LRSLRRKIGLVQQEPALFSTTIYENIKYGNED---AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQ 978 (1082)
Q Consensus 906 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~---~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQ 978 (1082)
...+|+.++|+||++.+|..|+++|+.++... .+ ++++.++++..++.+.+. ...+..+..|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHHH
Confidence 66789999999999999999999999874211 11 234555666666654432 23445667899999
Q ss_pred HHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHH
Q 001411 979 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQ 1057 (1082)
Q Consensus 979 rQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~e 1057 (1082)
|||++||||++++|++|||||||++||+.+.+.+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 248 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRN 248 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998777899999999999865 99999999999999999999
Q ss_pred Hhhhc
Q 001411 1058 LLRKE 1062 (1082)
Q Consensus 1058 Ll~~~ 1062 (1082)
+...+
T Consensus 249 ~~~~~ 253 (267)
T PRK14237 249 IFTNP 253 (267)
T ss_pred HhcCC
Confidence 97643
No 219
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3.2e-42 Score=379.59 Aligned_cols=224 Identities=27% Similarity=0.473 Sum_probs=187.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHH---HHh
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SLR 910 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR 910 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.. .+|
T Consensus 7 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRG---NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 489999999996 34699999999999999999999999999999999999999999999999999876643 457
Q ss_pred cceEEEcccCccccc-cHHHHhccCCC---CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 911 RKIGLVQQEPALFST-TIYENIKYGNE---DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~g-TIreNl~~~~~---~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
++++|+||++.+|++ |+++|+.++.. ..+. +.+.++++..++.+. ......+||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGA-----------AKLMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHH
Confidence 889999999999986 99999976321 1122 223344444444332 2233467999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHh
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
+|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999999866 9999999999999999999998
Q ss_pred hhccchHHHHHH
Q 001411 1060 RKENGIYKQLIR 1071 (1082)
Q Consensus 1060 ~~~~g~f~~l~~ 1071 (1082)
+.....+..++.
T Consensus 233 ~~~~~~~~~~~~ 244 (269)
T PRK11831 233 ANPDPRVRQFLD 244 (269)
T ss_pred cCCcHHHHHHHH
Confidence 644445555554
No 220
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-42 Score=383.85 Aligned_cols=216 Identities=28% Similarity=0.476 Sum_probs=182.3
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCC---------
Q 001411 835 IELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRT--------- 903 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~--------- 903 (1082)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 89999999997321 1369999999999999999999999999999999999999999999999887632
Q ss_pred ---------------CCHHHHhcceEEEcccC--ccccccHHHHhccCCC--CCCHH----HHHHHHHHhcHH-HHHhhC
Q 001411 904 ---------------LNLRSLRRKIGLVQQEP--ALFSTTIYENIKYGNE--DASEI----ELMKATKAANAH-GFISRM 959 (1082)
Q Consensus 904 ---------------i~~~~lR~~i~~VpQdp--~Lf~gTIreNl~~~~~--~~~d~----ei~~al~~a~l~-~~i~~l 959 (1082)
.+...+|++|+||||+| .+|..|+++||.++.. ..+.+ ++.++++.+++. ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~---- 158 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESY---- 158 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh----
Confidence 13467889999999986 6888999999987532 22332 344455555542 22
Q ss_pred cccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-c
Q 001411 960 PEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-N 1037 (1082)
Q Consensus 960 p~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~ 1037 (1082)
......+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+. .
T Consensus 159 -------~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~ 231 (305)
T PRK13651 159 -------LQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEW 231 (305)
T ss_pred -------hhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHh
Confidence 334456899999999999999999999999999999999999999999999874 4899999999999875 5
Q ss_pred cCEEEEEeCCEEEEecChHHHhhh
Q 001411 1038 ADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 1038 ~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
||||++|++|++++.|+++++.+.
T Consensus 232 adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 232 TKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999998764
No 221
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-42 Score=378.60 Aligned_cols=222 Identities=31% Similarity=0.542 Sum_probs=187.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCccCCCCC--HH
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRTLN--LR 907 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~i~--~~ 907 (1082)
-+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYG---SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEEC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 47899999996 3479999999999999999999999999999999999986 46999999999987653 34
Q ss_pred HHhcceEEEcccCccccccHHHHhccCCC--C------CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 908 SLRRKIGLVQQEPALFSTTIYENIKYGNE--D------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 908 ~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~------~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
.+|++++|+||++.+|++|+++|+.++.. . ..++++.++++..++.+.+ .+.+...+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEEL-------GDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhcChhhCCHHHH
Confidence 67899999999999999999999976411 1 1123455666666654332 1233445678999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999999
Q ss_pred hhhccchH
Q 001411 1059 LRKENGIY 1066 (1082)
Q Consensus 1059 l~~~~g~f 1066 (1082)
.+.+...|
T Consensus 236 ~~~~~~~~ 243 (251)
T PRK14244 236 FKNPQSSK 243 (251)
T ss_pred hcCCCChH
Confidence 87555444
No 222
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.2e-42 Score=392.63 Aligned_cols=200 Identities=35% Similarity=0.545 Sum_probs=176.1
Q ss_pred ccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHH----hhhceEEccCCCcChh-
Q 001411 221 MVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL----REQMGLVSQEPALFAT- 295 (1082)
Q Consensus 221 ~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~----~~~i~~v~Q~~~l~~~- 295 (1082)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...++.++ |+.|+||+|++++|+.
T Consensus 7 ~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~ 86 (363)
T TIGR01186 7 KGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHM 86 (363)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCC
Confidence 49999999999999999999999999999999999999999999999999999888777 7789999999999986
Q ss_pred cHHHHHhcCCCCC------CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeC
Q 001411 296 SIANNILLGKEDA------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDE 369 (1082)
Q Consensus 296 ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDE 369 (1082)
||+|||.++.+.. ..+++.++++..++..+ .+....+|||||||||+|||||+.+|+|+||||
T Consensus 87 TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~-----------~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 87 TILQNTSLGPELLGWPEQERKEKALELLKLVGLEEY-----------EHRYPDELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchh-----------hhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 9999999874321 12345555555555443 445556899999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCcccc-ccCCEEEEEeCCEEEEecCchhhhhc
Q 001411 370 ATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTV-RDVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 370 pts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|||+||+.+++.+++.+.++. .++|+|+|||+++++ +.||+|++|++|++++.|++++++.+
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999999998874 378999999999986 45999999999999999999999875
No 223
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-42 Score=380.12 Aligned_cols=213 Identities=34% Similarity=0.544 Sum_probs=186.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
++++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 4 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 789999999962 235999999999999999999999999999999999999999999999999998877788899999
Q ss_pred EEcccC--ccccccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 915 LVQQEP--ALFSTTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 915 ~VpQdp--~Lf~gTIreNl~~~~~--~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
||||+| .+|+.|+++|+.++.. ..+. +.+.++++.+++.++..+. ...||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRV-----------PHHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCC-----------cccCCHHHHHHHHHHH
Confidence 999998 4788899999976421 1222 3356667777766554433 3579999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHHhh
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
||+.+|++|||||||++||+.+.+.+.+.+++..+ ++|+|++||+++.+. .||||++|++|++++.|+++++++
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 99999999999999999999999999999998753 789999999999995 599999999999999999999975
No 224
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-42 Score=377.06 Aligned_cols=224 Identities=31% Similarity=0.499 Sum_probs=186.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCccCCC--CCH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LNL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 906 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYG---NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 489999999996 3469999999999999999999999999999999999997 479999999999864 345
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCCC--C-----CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNED--A-----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~--~-----~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
..+|+.++|++|++.+|+.|+++|+.++... . .++++.++++..+++... + ........+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~----~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET---K----DNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch---H----HHhccChhhCCHHHH
Confidence 6678899999999999999999999864211 1 122344555555553211 1 112345568999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999999865 999999999999999999999
Q ss_pred hhhccchHH
Q 001411 1059 LRKENGIYK 1067 (1082)
Q Consensus 1059 l~~~~g~f~ 1067 (1082)
...+...|.
T Consensus 234 ~~~~~~~~~ 242 (251)
T PRK14251 234 FIAPKKQIT 242 (251)
T ss_pred HhCCCCHHH
Confidence 764443343
No 225
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.8e-42 Score=392.43 Aligned_cols=212 Identities=31% Similarity=0.502 Sum_probs=183.2
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|+++.+.++. ++.|+
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999975 3489999999999999999999999999999999999999999999999999876654 56799
Q ss_pred EEccCCCcChh-cHHHHHhcCCCCC--C----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHh
Q 001411 285 LVSQEPALFAT-SIANNILLGKEDA--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 357 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~~--~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARa 357 (1082)
||+|++.+|+. ||+|||.|+.... + .+++.++++.. |++........+|||||||||+||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l-----------~L~~~~~~~~~~LSgGq~QRvaLARa 148 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLV-----------GLPGSERKYPGQLSGGQQQRVALARA 148 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCCchhhCChhhCCHHHHHHHHHHHH
Confidence 99999999975 9999999874321 1 12333444444 44444455667899999999999999
Q ss_pred cccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 358 VLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 358 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|+.+|+++|||||||+||+.++..+.+.|+++.+ +.|+|+|||+++++. .||+|++|++|++++.|+++++..+
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999999988754 689999999999875 5999999999999999999999865
No 226
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5e-42 Score=362.99 Aligned_cols=200 Identities=36% Similarity=0.583 Sum_probs=181.4
Q ss_pred EEEEeEEEECCCCCC--cccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcc
Q 001411 835 IELRNVSFKYPVRPD--ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 912 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~--~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 912 (1082)
|+++||+++|+...+ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 579999999974211 3699999999999999999999999999999999999999999999999 6
Q ss_pred eEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCC
Q 001411 913 IGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP 992 (1082)
Q Consensus 913 i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~ 992 (1082)
|+|+||+|.+|++|+++|+.++. ..++++.+++++.+++.+++..+|.|+++.+.+.+.+||+|||||++||||++++|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGK-PFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCC-CcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999853 34556778888899999999999999999999999999999999999999999999
Q ss_pred CEEEeeCCCCCCCHHHHHHHHH-HHHHhc-CCceEEEEecCchhhhccCEEEEEeCCE
Q 001411 993 SILLLDEATSALDTASENLIQE-ALDKLM-EGRTTIMVAHRLSTIRNADKIAVLQQGK 1048 (1082)
Q Consensus 993 ~ILlLDEaTS~LD~~te~~I~~-~l~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1048 (1082)
+++||||||++||+++.+.+.+ .+++.. +++|||++||+++.+..||+|++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 566553 4689999999999998899999999985
No 227
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-42 Score=378.81 Aligned_cols=219 Identities=30% Similarity=0.507 Sum_probs=185.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCccCCC--CCH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LNL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 906 (1082)
.|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 21 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYG---EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeC---CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 599999999996 3469999999999999999999999999999999999875 689999999999865 344
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCC---CC----CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNE---DA----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~---~~----~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
..+|++++|+||++.+|++|+++|+.++.. .. .++.+.++++..++.+.+. ........+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccCCHHHH
Confidence 577899999999999999999999986421 10 1233455555555432211 223345678999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667899999999998865 999999999999999999999
Q ss_pred hhhc
Q 001411 1059 LRKE 1062 (1082)
Q Consensus 1059 l~~~ 1062 (1082)
..++
T Consensus 251 ~~~~ 254 (268)
T PRK14248 251 FTSP 254 (268)
T ss_pred HhCC
Confidence 8643
No 228
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-42 Score=377.28 Aligned_cols=223 Identities=30% Similarity=0.505 Sum_probs=187.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCCCC--CH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRTL--NL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 906 (1082)
.|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 12 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYG---EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 599999999996 34699999999999999999999999999999999999985 799999999998653 34
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
..+|+.++|+||++.+|+.|+++|+.++.. ..+. +++.++++.+++.+.+ +.........|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHHH
Confidence 567889999999999999999999986421 1222 2345556665553221 11223445679999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHh
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987668999999999999865 9999999999999999999998
Q ss_pred hhccchH
Q 001411 1060 RKENGIY 1066 (1082)
Q Consensus 1060 ~~~~g~f 1066 (1082)
+++...|
T Consensus 242 ~~~~~~~ 248 (258)
T PRK14268 242 HNPREKS 248 (258)
T ss_pred cCCCCHH
Confidence 6544433
No 229
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.1e-42 Score=371.40 Aligned_cols=216 Identities=31% Similarity=0.555 Sum_probs=182.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... +++++
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYG---ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 78999999996 346999999999999999999999999999999999999999999999999998776544 46899
Q ss_pred EEcccCcc-ccccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccC
Q 001411 915 LVQQEPAL-FSTTIYENIKYGNE--DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 991 (1082)
Q Consensus 915 ~VpQdp~L-f~gTIreNl~~~~~--~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~ 991 (1082)
|+||++.+ +..|+++|+.++.. ..+.++..+ .+.++++.+ |++........+||||||||++||||++++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999987 46799999976421 122221111 122333333 444445556678999999999999999999
Q ss_pred CCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhh
Q 001411 992 PSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 992 ~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
|+||||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999875 37899999999999988999999999999999999999863
No 230
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-42 Score=366.92 Aligned_cols=203 Identities=29% Similarity=0.497 Sum_probs=177.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++||+++|+ +.++|+|+||+|++| ++||+|+||||||||+++|.|+++|++|+|.++|.++...+ ..+|++++
T Consensus 1 i~~~~~~~~~~---~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYG---KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEEC---CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 57999999996 346999999999999 99999999999999999999999999999999999998776 77899999
Q ss_pred EEcccCccccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~g-TIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||+|.+|.+ |+++|+.+... ..+ ++++.++++..++.++. ++. ..+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~----~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRA-------KKK----IGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHH-------hCc----hhhCCHHHHHHHHHHHH
Confidence 99999999986 99999975311 111 23456667777765543 222 35699999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1053 (1082)
++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. |||+++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999988767999999999999965 9999999999999865
No 231
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-42 Score=371.48 Aligned_cols=210 Identities=29% Similarity=0.472 Sum_probs=178.0
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHH---H
Q 001411 834 NIELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS---L 909 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---l 909 (1082)
.++++||+++|+.+. ..++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++..++... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 389999999997321 147999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cceEEEcccCccccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHH
Q 001411 910 R-RKIGLVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 981 (1082)
Q Consensus 910 R-~~i~~VpQdp~Lf~g-TIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 981 (1082)
| ++++|+||+|.+|+. |+++|+.++.. ..+ ++++.++++..++.+ .......+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEH-----------RANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCch-----------hhhCChhhCCHHHHHH
Confidence 3 689999999999875 99999976311 112 223445555554433 3334456899999999
Q ss_pred HHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhccCEEEEEeCCEEEEecC
Q 001411 982 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGS 1054 (1082)
Q Consensus 982 laLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~ 1054 (1082)
++||||++++|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999874 4789999999999999899999999999998775
No 232
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-42 Score=368.65 Aligned_cols=209 Identities=28% Similarity=0.486 Sum_probs=180.0
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYG---DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEEC---CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 57899999996 34699999999999999999999999999999999999999999999999988753 356788999
Q ss_pred EEcccCccccc-cHHHHhccCCC--CC----CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFST-TIYENIKYGNE--DA----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~g-TIreNl~~~~~--~~----~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||++.+|+. |+++|+.++.. .. .++++.++++..++.++..+ . ..+||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~----~~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADR-------L----VKTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-------C----hhhCCHHHHHHHHHHHH
Confidence 99999998875 99999976311 11 12345666777766554333 2 35799999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
++.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999999999999998753 7899999999999865 999999999999999998875
No 233
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-42 Score=376.09 Aligned_cols=222 Identities=30% Similarity=0.498 Sum_probs=187.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CccEEEECCccCCC--CCH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD--P---ISGTVLIDGYDIRT--LNL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--i~~ 906 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 12 ~l~i~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYG---QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEEC---CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 499999999996 3469999999999999999999999999999999999997 3 58999999999864 445
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCCC---CCHH----HHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNED---ASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~---~~d~----ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
..+|++++|+||++.+|++|+++|+.++... .+++ ++.++++..++.+++. ......+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHH
Confidence 6788999999999999999999999764211 1222 2344455555543322 223445568999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778899999999999865 999999999999999999999
Q ss_pred hhhccch
Q 001411 1059 LRKENGI 1065 (1082)
Q Consensus 1059 l~~~~g~ 1065 (1082)
.+++...
T Consensus 242 ~~~~~~~ 248 (259)
T PRK14274 242 FSNPDDQ 248 (259)
T ss_pred hhCCCCH
Confidence 8654443
No 234
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-42 Score=378.15 Aligned_cols=221 Identities=33% Similarity=0.552 Sum_probs=189.7
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCCC--C
Q 001411 832 KGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRT--L 904 (1082)
Q Consensus 832 ~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i 904 (1082)
.+.|+++||+++|+ +.++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 23 ~~~l~~~nl~~~~~---~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYG---DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEEC---CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 45699999999996 34699999999999999999999999999999999999984 89999999999875 3
Q ss_pred CHHHHhcceEEEcccCccccccHHHHhccCCC--CC-C----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChh
Q 001411 905 NLRSLRRKIGLVQQEPALFSTTIYENIKYGNE--DA-S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGG 977 (1082)
Q Consensus 905 ~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~~-~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgG 977 (1082)
+...+|++++|+||++.+|++|+++|+.++.. .. . ++.+.++++.+++.+.+. +..+..+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHH
Confidence 45678999999999999999999999986421 11 1 233566666666654332 2344556789999
Q ss_pred HHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChH
Q 001411 978 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHE 1056 (1082)
Q Consensus 978 QrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~ 1056 (1082)
||||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999998778899999999999865 9999999999999999999
Q ss_pred HHhhhc
Q 001411 1057 QLLRKE 1062 (1082)
Q Consensus 1057 eLl~~~ 1062 (1082)
++.+++
T Consensus 253 ~~~~~~ 258 (272)
T PRK14236 253 TLFTSP 258 (272)
T ss_pred HHhcCC
Confidence 998643
No 235
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-42 Score=378.44 Aligned_cols=215 Identities=33% Similarity=0.584 Sum_probs=186.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++|++++|+. .+.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~-~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPN-SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCC-CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 4899999999962 235799999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEcccC--ccccccHHHHhccCCC--CCCHHH----HHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHH
Q 001411 914 GLVQQEP--ALFSTTIYENIKYGNE--DASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 985 (1082)
Q Consensus 914 ~~VpQdp--~Lf~gTIreNl~~~~~--~~~d~e----i~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLA 985 (1082)
+|+||+| .++..|+++|+.++.. ..+.++ +.++++..++.++.. ....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLD-----------KEPQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CCcccCCHHHHHHHHHH
Confidence 9999998 4567899999986421 123332 344555555554433 33468999999999999
Q ss_pred HHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhh
Q 001411 986 RAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 986 RAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999999998753 489999999999988899999999999999999999876
No 236
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-42 Score=379.96 Aligned_cols=217 Identities=31% Similarity=0.528 Sum_probs=188.5
Q ss_pred cEEEEeEEEECCCCC---CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCC-HHHH
Q 001411 834 NIELRNVSFKYPVRP---DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN-LRSL 909 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~---~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-~~~l 909 (1082)
.|+++|++++|+... +.++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997321 246999999999999999999999999999999999999999999999999987654 4567
Q ss_pred hcceEEEcccCc--cccccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHH
Q 001411 910 RRKIGLVQQEPA--LFSTTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 981 (1082)
Q Consensus 910 R~~i~~VpQdp~--Lf~gTIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 981 (1082)
|++++|+||+|. +|..|+.+|+.++.. ..+ ++++.++++.+++.++..+.| .+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 677799999987521 112 345667777777776655433 5799999999
Q ss_pred HHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHh
Q 001411 982 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 982 laLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
++|||||+++|++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999874 378999999999999889999999999999999999987
Q ss_pred hh
Q 001411 1060 RK 1061 (1082)
Q Consensus 1060 ~~ 1061 (1082)
..
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 63
No 237
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-42 Score=375.85 Aligned_cols=221 Identities=30% Similarity=0.536 Sum_probs=186.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcc---ccC--CccEEEECCccCCCC--CH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRF---YDP--ISGTVLIDGYDIRTL--NL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl---~~p--~~G~I~idG~di~~i--~~ 906 (1082)
.|+++|++++|+ +.++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYG---DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEEC---CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 489999999996 34699999999999999999999999999999999997 444 589999999998764 34
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCC--CC-----CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNE--DA-----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~~-----~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
..+|++++|+||+|.+|+.|+++|+.++.. .. .+++++++++..++.+++. +.....+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCHHHH
Confidence 678899999999999999999999976421 11 1234555666665543332 233455678999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999855 999999999999999999999
Q ss_pred hhhccc
Q 001411 1059 LRKENG 1064 (1082)
Q Consensus 1059 l~~~~g 1064 (1082)
.+++..
T Consensus 233 ~~~~~~ 238 (250)
T PRK14245 233 FTNPEK 238 (250)
T ss_pred hcCCCC
Confidence 865433
No 238
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-42 Score=374.75 Aligned_cols=224 Identities=33% Similarity=0.572 Sum_probs=188.5
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCCC--CC
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRT--LN 905 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~ 905 (1082)
|.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 2 ~~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYG---DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEEC---CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 4699999999996 34699999999999999999999999999999999999863 68999999999875 45
Q ss_pred HHHHhcceEEEcccCccccccHHHHhccCCC--CC-----CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhH
Q 001411 906 LRSLRRKIGLVQQEPALFSTTIYENIKYGNE--DA-----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQ 978 (1082)
Q Consensus 906 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~~-----~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQ 978 (1082)
...+|++++|+||+|.+|+.|+++|+.++.. .. .++++.++++.+++.+.+. ........+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHH
Confidence 5678999999999999999999999986421 11 1234455555655543322 22344556899999
Q ss_pred HHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHH
Q 001411 979 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQ 1057 (1082)
Q Consensus 979 rQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~e 1057 (1082)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988668899999999998865 99999999999999999999
Q ss_pred HhhhccchH
Q 001411 1058 LLRKENGIY 1066 (1082)
Q Consensus 1058 Ll~~~~g~f 1066 (1082)
+...+...+
T Consensus 232 ~~~~~~~~~ 240 (250)
T PRK14240 232 LFTNPKDKR 240 (250)
T ss_pred HHhCCCChH
Confidence 976444333
No 239
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-42 Score=377.99 Aligned_cols=221 Identities=30% Similarity=0.462 Sum_probs=190.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.+
T Consensus 11 ~l~i~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVP---GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEEC---CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 599999999996 34699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEcccCccccc-cHHHHhccCCC----------CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 914 GLVQQEPALFST-TIYENIKYGNE----------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 914 ~~VpQdp~Lf~g-TIreNl~~~~~----------~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
+|+||++.++.+ |+++|+.++.. ...++++.++++.+++.++..+. ..+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRL-----------VDSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----------cccCCHHHHHHH
Confidence 999999877654 99999986421 11234566777777776554432 247999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-C-CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHh
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-E-GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~-~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
+|||||+.+|+||||||||++||+.+.+.+.+.|++.. + ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999999999999874 2 7899999999999965 9999999999999999999987
Q ss_pred hhccchHHHHH
Q 001411 1060 RKENGIYKQLI 1070 (1082)
Q Consensus 1060 ~~~~g~f~~l~ 1070 (1082)
.. .....++
T Consensus 237 ~~--~~~~~~~ 245 (265)
T PRK10575 237 RG--ETLEQIY 245 (265)
T ss_pred CH--HHHHHHh
Confidence 52 3344444
No 240
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=4.3e-42 Score=371.50 Aligned_cols=216 Identities=29% Similarity=0.463 Sum_probs=182.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHH-Hhcce
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS-LRRKI 913 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~i 913 (1082)
|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYG---KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeC---CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 47899999996 346999999999999999999999999999999999999999999999999998877655 45789
Q ss_pred EEEcccCccccc-cHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHcc
Q 001411 914 GLVQQEPALFST-TIYENIKYGNED--ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILK 990 (1082)
Q Consensus 914 ~~VpQdp~Lf~g-TIreNl~~~~~~--~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~ 990 (1082)
+|+||++.+|++ |+++|+.++.+. ...++.. ..+.+.++.+ |++........+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 999999864321 1221111 1122333333 44444455567899999999999999999
Q ss_pred CCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 991 NPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 991 ~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
+|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999999875 47899999999988765 99999999999999999999865
No 241
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-42 Score=375.46 Aligned_cols=220 Identities=32% Similarity=0.523 Sum_probs=185.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CccEEEECCccCCCC--CH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD--P---ISGTVLIDGYDIRTL--NL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~i--~~ 906 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++... +.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYN---KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 489999999996 3469999999999999999999999999999999999954 6 489999999998653 34
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCC---CCCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGN---EDAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~---~~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
..+|+.++||||+|.+|+.|+++|+.++. +... ++++.++++.+++.+.+. +.......+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHH
Confidence 56788999999999999999999998642 1111 233445566666543322 223445678999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667999999999999865 999999999999999999999
Q ss_pred hhhcc
Q 001411 1059 LRKEN 1063 (1082)
Q Consensus 1059 l~~~~ 1063 (1082)
.+.+.
T Consensus 235 ~~~~~ 239 (252)
T PRK14239 235 FMNPK 239 (252)
T ss_pred HhCCC
Confidence 86443
No 242
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-42 Score=390.10 Aligned_cols=219 Identities=31% Similarity=0.538 Sum_probs=188.2
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcc
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 912 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 912 (1082)
..|+++||+++|+ +.++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++..++. .|++
T Consensus 18 ~~l~l~~v~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFD---GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 3599999999996 3469999999999999999999999999999999999999999999999999987764 4789
Q ss_pred eEEEcccCccccc-cHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHH
Q 001411 913 IGLVQQEPALFST-TIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 985 (1082)
Q Consensus 913 i~~VpQdp~Lf~g-TIreNl~~~~~--~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLA 985 (1082)
++||+|++.+|+. |++||+.++.. ..+. +++.++++..++.++.++ ...+||||||||++||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~-----------~~~~LSgGq~QRVaLA 161 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKR-----------KPHQLSGGQRQRVALA 161 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHHHHH
Confidence 9999999999975 99999997632 1222 234455566665544333 3357999999999999
Q ss_pred HHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhc
Q 001411 986 RAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKE 1062 (1082)
Q Consensus 986 RAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~ 1062 (1082)
|||+++|++||||||||+||..+.+.+.+.|++.. .+.|+|+|||+++.+.. ||||+||++|++++.|+|+++..++
T Consensus 162 RAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 162 RSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999998888764 37899999999999755 9999999999999999999999866
Q ss_pred cchHH
Q 001411 1063 NGIYK 1067 (1082)
Q Consensus 1063 ~g~f~ 1067 (1082)
...|.
T Consensus 242 ~~~~~ 246 (377)
T PRK11607 242 TTRYS 246 (377)
T ss_pred ccHHH
Confidence 65543
No 243
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.2e-42 Score=366.00 Aligned_cols=199 Identities=30% Similarity=0.561 Sum_probs=173.0
Q ss_pred EEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEE
Q 001411 836 ELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGL 915 (1082)
Q Consensus 836 ~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~ 915 (1082)
+++||+++|+. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. ...|++++|
T Consensus 1 ~~~~l~~~~~~--~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKK--GTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCC--cCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 36899999963 1469999999999999999999999999999999999999999999999998864 457789999
Q ss_pred EcccC--ccccccHHHHhccCCCCC--CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccC
Q 001411 916 VQQEP--ALFSTTIYENIKYGNEDA--SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 991 (1082)
Q Consensus 916 VpQdp--~Lf~gTIreNl~~~~~~~--~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~ 991 (1082)
+||+| .+|+.|++||+.++.... .++++.++++..++.++..+.| ..||||||||++|||||+++
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhC
Confidence 99998 467899999998754322 2346777788877766544333 47999999999999999999
Q ss_pred CCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEE
Q 001411 992 PSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVA 1050 (1082)
Q Consensus 992 ~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv 1050 (1082)
|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999874 57899999999999975 9999999999985
No 244
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.2e-42 Score=373.13 Aligned_cols=221 Identities=27% Similarity=0.458 Sum_probs=183.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHH-hcce
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSL-RRKI 913 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l-R~~i 913 (1082)
|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |+.+
T Consensus 3 i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFD---GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 78999999996 3469999999999999999999999999999999999999999999999999988776654 5679
Q ss_pred EEEcccCccccc-cHHHHhccCCCCCCH--HH---HHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 914 GLVQQEPALFST-TIYENIKYGNEDASE--IE---LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 914 ~~VpQdp~Lf~g-TIreNl~~~~~~~~d--~e---i~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
+|+||++.+|++ |+++|+.++...... .. .........+.++++.+ |++.........||||||||++||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 999999999986 999999874321000 00 00000111122333332 34444445567899999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
++++|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999998777899999999999975 99999999999999999999875
No 245
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=4.5e-42 Score=367.63 Aligned_cols=207 Identities=25% Similarity=0.488 Sum_probs=176.6
Q ss_pred EEEEeEEEECCCCCC-cccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 835 IELRNVSFKYPVRPD-ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~-~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
|+++||+++|+.+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 789999999973211 269999999999999999999999999999999999999999999999999875 456778999
Q ss_pred EEEcccCccccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 914 GLVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 914 ~~VpQdp~Lf~g-TIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
+|+||+|.+|++ |+++|+.+... ..+ ++++.++++..++.+.. .....+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELL-----------DRRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hhhhhhcCHHHHHHHHHHH
Confidence 999999999985 99999975321 111 23445556666554443 3345679999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1053 (1082)
|++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999875 47899999999999865 9999999999998865
No 246
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.3e-42 Score=369.23 Aligned_cols=203 Identities=33% Similarity=0.542 Sum_probs=171.5
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHH---HHhhh
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK---WLREQ 282 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~~~ 282 (1082)
++++|++++|++...++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .+|+.
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 689999999974323599999999999999999999999999999999999999999999999998765533 46788
Q ss_pred ceEEccCCCcChh-cHHHHHhcCCCC--C----CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 001411 283 MGLVSQEPALFAT-SIANNILLGKED--A----SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 355 (1082)
Q Consensus 283 i~~v~Q~~~l~~~-ti~~ni~~g~~~--~----~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lA 355 (1082)
++|++|++.+|.. |++||+.++... . ..+++.++++..++.+... ....+||||||||++||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la 150 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAH-----------ALPMQLSGGEQQRVAIA 150 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHHHHHH
Confidence 9999999998875 999999875211 1 1234455555555544333 33458999999999999
Q ss_pred HhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEE
Q 001411 356 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQV 419 (1082)
Q Consensus 356 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i 419 (1082)
|||+.+|+++||||||++||+.+.+.+.+.|.++. +++|+|+|||+++.+.. ||++++|++|++
T Consensus 151 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 151 RAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999998874 47899999999999875 899999999974
No 247
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.3e-42 Score=383.84 Aligned_cols=213 Identities=27% Similarity=0.496 Sum_probs=183.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+ +..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.|+|.|+...+ ...|++|
T Consensus 7 ~i~i~~l~k~~~---~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 7 PIDFRNVEKRYG---DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred eEEEEeEEEEEC---CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 599999999996 346999999999999999999999999999999999999999999999999997754 4578999
Q ss_pred EEEcccCcccc-ccHHHHhccCCC--CCCHHH----HHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 914 GLVQQEPALFS-TTIYENIKYGNE--DASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 914 ~~VpQdp~Lf~-gTIreNl~~~~~--~~~d~e----i~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
+|+||++.+|. .|++||+.+... ..+..+ +.++++..++ ++..++++ .+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~----~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKL-------ENKADAKV----GELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------chHhcCch----hhCCHHHHHHHHHHH
Confidence 99999999886 699999985321 122222 2233333333 33445555 469999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhh
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
||+++|++|+|||||++||+.+.+.+++.|++.. +++|+|++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999875 47899999999999966 999999999999999999999754
No 248
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-42 Score=374.87 Aligned_cols=227 Identities=31% Similarity=0.523 Sum_probs=190.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCCCC--CH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRTL--NL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 906 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYG---EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeC---CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 489999999996 34699999999999999999999999999999999999984 899999999998753 34
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCC---CC----CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNE---DA----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~---~~----~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
..+|++++|+||+|.+|+.|+++|+.++.. .. .++++.++++.+++.+.+. ........+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVK-------SELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhH-------HHHhCChhhcCHHHH
Confidence 567889999999999999999999986421 11 1233555666666644332 223445678999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998755 999999999999999999999
Q ss_pred hhhccchHHHHH
Q 001411 1059 LRKENGIYKQLI 1070 (1082)
Q Consensus 1059 l~~~~g~f~~l~ 1070 (1082)
.+++...|.+.+
T Consensus 233 ~~~~~~~~~~~~ 244 (250)
T PRK14262 233 VERPKNKLTEEY 244 (250)
T ss_pred HhCCCChHHHHH
Confidence 864434454443
No 249
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.5e-42 Score=364.65 Aligned_cols=203 Identities=27% Similarity=0.464 Sum_probs=178.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++||+++|+ +.++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++... ..+|++++
T Consensus 1 l~~~~l~~~~~---~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYG---KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEEC---CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 47899999996 34799999999999999999999999999999999999999999999999998764 56788999
Q ss_pred EEcccCccc-cccHHHHhccCC--CCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccC
Q 001411 915 LVQQEPALF-STTIYENIKYGN--EDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 991 (1082)
Q Consensus 915 ~VpQdp~Lf-~gTIreNl~~~~--~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~ 991 (1082)
|+||++.+| ..|++||+.++. ...+++++.++++..++.+...+ ....||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKK-----------KVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhh-----------hHhhCCHHHHHHHHHHHHHhcC
Confidence 999999888 479999997642 12345667778888887665433 2357999999999999999999
Q ss_pred CCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 001411 992 PSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 992 ~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1053 (1082)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999865 47899999999999865 9999999999999865
No 250
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-42 Score=373.37 Aligned_cols=224 Identities=29% Similarity=0.501 Sum_probs=188.3
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CccEEEECCccCCCC--
Q 001411 832 KGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD--P---ISGTVLIDGYDIRTL-- 904 (1082)
Q Consensus 832 ~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~i-- 904 (1082)
+|.|+++|++++|+ +.++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++...
T Consensus 2 ~~~l~~~nl~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~ 78 (252)
T PRK14256 2 NNKVKLEQLNVHFG---KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGV 78 (252)
T ss_pred CcEEEEEEEEEEeC---CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccC
Confidence 36799999999996 3469999999999999999999999999999999999986 4 689999999998653
Q ss_pred CHHHHhcceEEEcccCcccc-ccHHHHhccCCC--C-CC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCCh
Q 001411 905 NLRSLRRKIGLVQQEPALFS-TTIYENIKYGNE--D-AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSG 976 (1082)
Q Consensus 905 ~~~~lR~~i~~VpQdp~Lf~-gTIreNl~~~~~--~-~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSg 976 (1082)
....+|++++|+||++.+|. .|+++|+.++.. . .+ ++++.++++..++.+.+.. .....+.+|||
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~ 151 (252)
T PRK14256 79 DPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKD-------RLKSNAMELSG 151 (252)
T ss_pred ChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcCcCCH
Confidence 44578899999999999998 599999976421 1 11 2334555666665443321 22345678999
Q ss_pred hHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecCh
Q 001411 977 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSH 1055 (1082)
Q Consensus 977 GQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~ 1055 (1082)
|||||++||||++++|++|||||||++||+.+.+.+.+.|++..++.|+|++||+++.+.. ||++++|++|+|++.|++
T Consensus 152 G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14256 152 GQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGET 231 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998777899999999999865 999999999999999999
Q ss_pred HHHhhhccch
Q 001411 1056 EQLLRKENGI 1065 (1082)
Q Consensus 1056 ~eLl~~~~g~ 1065 (1082)
+++...+...
T Consensus 232 ~~~~~~~~~~ 241 (252)
T PRK14256 232 KKIFTTPEKK 241 (252)
T ss_pred HHHHhCCCcH
Confidence 9998654443
No 251
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-42 Score=391.66 Aligned_cols=205 Identities=36% Similarity=0.577 Sum_probs=176.9
Q ss_pred ccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHH----hcceEEEcccCcccc-c
Q 001411 851 TIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSL----RRKIGLVQQEPALFS-T 925 (1082)
Q Consensus 851 ~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l----R~~i~~VpQdp~Lf~-g 925 (1082)
++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+ |++++||||++.+|+ .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999998876554 468999999999997 5
Q ss_pred cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeC
Q 001411 926 TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDE 999 (1082)
Q Consensus 926 TIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDE 999 (1082)
|++||+.++.. ..+ ++++.++++.+++.++..+. ..+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~-----------~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSY-----------PDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcC-----------cccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999987421 112 23455666777665554443 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhccchH
Q 001411 1000 ATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKENGIY 1066 (1082)
Q Consensus 1000 aTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~~g~f 1066 (1082)
|||+||+.+.+.+++.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+|++++.++...|
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999999999999999874 37899999999999865 99999999999999999999987554434
No 252
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=7e-42 Score=375.05 Aligned_cols=218 Identities=32% Similarity=0.513 Sum_probs=184.7
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCC-------
Q 001411 832 KGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL------- 904 (1082)
Q Consensus 832 ~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i------- 904 (1082)
.+.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..+
T Consensus 3 ~~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (257)
T PRK10619 3 ENKLNVIDLHKRYG---EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQL 79 (257)
T ss_pred CccEEEeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccc
Confidence 35699999999996 34699999999999999999999999999999999999999999999999988642
Q ss_pred ------CHHHHhcceEEEcccCccccc-cHHHHhccCC---CCCC----HHHHHHHHHHhcHHHHHhhCcccccccccCC
Q 001411 905 ------NLRSLRRKIGLVQQEPALFST-TIYENIKYGN---EDAS----EIELMKATKAANAHGFISRMPEGYQSHVGDR 970 (1082)
Q Consensus 905 ------~~~~lR~~i~~VpQdp~Lf~g-TIreNl~~~~---~~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~ 970 (1082)
....+|++++||||++.+|+. |++||+.++. .... ++++.++++..++.+.. ....
T Consensus 80 ~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~ 149 (257)
T PRK10619 80 KVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QGKY 149 (257)
T ss_pred ccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hhCC
Confidence 134678899999999999974 9999997531 1112 22344455555443322 1344
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCE
Q 001411 971 GVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGK 1048 (1082)
Q Consensus 971 G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1048 (1082)
...||||||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|+
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 150 PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 56899999999999999999999999999999999999999999999875 48999999999999986 99999999999
Q ss_pred EEEecChHHHhhhc
Q 001411 1049 VAEIGSHEQLLRKE 1062 (1082)
Q Consensus 1049 ive~G~~~eLl~~~ 1062 (1082)
+++.|+++++.+.+
T Consensus 230 i~~~~~~~~~~~~~ 243 (257)
T PRK10619 230 IEEEGAPEQLFGNP 243 (257)
T ss_pred EEEeCCHHHhhhCc
Confidence 99999999997643
No 253
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-42 Score=378.63 Aligned_cols=216 Identities=31% Similarity=0.532 Sum_probs=187.2
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++||+++|++...++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.|+
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999753445999999999999999999999999999999999999999999999999998877777888999
Q ss_pred EEccCC--CcChhcHHHHHhcCCCC--CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 285 LVSQEP--ALFATSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 285 ~v~Q~~--~l~~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
|++|++ .+++.|++|||.++... .+. +++.++++..++.+++... ...||||||||++|||
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qrv~lar 153 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNRE-----------PHRLSGGQKQRVAIAG 153 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCC-----------cccCCHHHHHHHHHHH
Confidence 999998 45677999999886321 122 3345555555555554444 3589999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhc
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
||+.+|+++||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 154 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 154 VLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998764 6899999999999888999999999999999999888664
No 254
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.1e-42 Score=373.60 Aligned_cols=221 Identities=27% Similarity=0.509 Sum_probs=183.7
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHH-hhhce
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL-REQMG 284 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~i~ 284 (1082)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 468999999974 349999999999999999999999999999999999999999999999999987776554 56799
Q ss_pred EEccCCCcChh-cHHHHHhcCCCCCCHHHH-------HHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 285 LVSQEPALFAT-SIANNILLGKEDASMDRV-------IEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~-------~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
|++|++.+|+. |++||+.++........+ ........+++.++.+ |++...+....+||||||||++|||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 156 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIAR 156 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHHH
Confidence 99999999887 999999876432110000 0000111223444444 5666667777899999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhh
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
||+.+|+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 157 ALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 9999999999999999999999999999999875 57899999999999865 89999999999999999888754
No 255
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.8e-42 Score=369.25 Aligned_cols=204 Identities=35% Similarity=0.497 Sum_probs=172.1
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHH----H
Q 001411 835 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS----L 909 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~----l 909 (1082)
|+++||+++|+... ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996311 147999999999999999999999999999999999999999999999999998876432 4
Q ss_pred hcceEEEcccCccccc-cHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 910 RRKIGLVQQEPALFST-TIYENIKYGNED--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 910 R~~i~~VpQdp~Lf~g-TIreNl~~~~~~--~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
|++++|+||+|.+|.+ |+++|+.++... .. ++++.++++..++.+ .......+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGD-----------RLNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCch-----------hhhcChhhcCHHHHHHH
Confidence 6789999999999986 999999874321 11 223444454444433 33344568999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhccCEEEEEeCCEE
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKV 1049 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~i 1049 (1082)
+|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998754 7899999999999888999999999974
No 256
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-42 Score=383.63 Aligned_cols=227 Identities=29% Similarity=0.477 Sum_probs=188.4
Q ss_pred cEEEEeEEEECCCCC-------CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCH
Q 001411 834 NIELRNVSFKYPVRP-------DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~-------~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~ 906 (1082)
-|+++|++++|+.+. ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+.+++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999988875
Q ss_pred H---HHhcceEEEcccCc--ccc-ccHHHHhccC---CCCCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCC
Q 001411 907 R---SLRRKIGLVQQEPA--LFS-TTIYENIKYG---NEDAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQ 973 (1082)
Q Consensus 907 ~---~lR~~i~~VpQdp~--Lf~-gTIreNl~~~---~~~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~ 973 (1082)
. .+|++|+||||+|. |++ -|+.+|+... ..... .+.+.++++.+++.+ ..++. ....
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~~~~~----~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------EHYDR----YPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------HHhcC----CCcc
Confidence 3 57889999999994 555 4898888531 11112 233555566666532 12333 3457
Q ss_pred CChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEE
Q 001411 974 LSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVA 1050 (1082)
Q Consensus 974 LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv 1050 (1082)
||||||||++|||||+.+|++||+||||++||..+.+.|.+.|++..+ +.|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 7899999999999975 9999999999999
Q ss_pred EecChHHHhhhccchHHHHH
Q 001411 1051 EIGSHEQLLRKENGIYKQLI 1070 (1082)
Q Consensus 1051 e~G~~~eLl~~~~g~f~~l~ 1070 (1082)
|.|+++++++++...|.+.+
T Consensus 235 e~g~~~~~~~~p~hpyt~~l 254 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQAL 254 (327)
T ss_pred EECCHHHHhcCCCCHHHHHH
Confidence 99999999986655666543
No 257
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=5.5e-42 Score=390.01 Aligned_cols=213 Identities=32% Similarity=0.564 Sum_probs=185.6
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhc
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 283 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 283 (1082)
..++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...++. ++.|
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 35999999999974 3489999999999999999999999999999999999999999999999999876654 4679
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCCC--C----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 284 GLVSQEPALFAT-SIANNILLGKEDA--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~~--~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
+||+|++.+|+. ||+|||.|+.... + .+++.++++..++.++.++.| .+|||||||||+|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999977 9999999874321 1 234555666666655555554 589999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
||+.+|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++..+
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999999998753 789999999999865 5999999999999999999998765
No 258
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-42 Score=376.80 Aligned_cols=213 Identities=33% Similarity=0.563 Sum_probs=184.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCC-HHHHhcce
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN-LRSLRRKI 913 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-~~~lR~~i 913 (1082)
|+++||+++|+. +.++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+++++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 789999999962 346999999999999999999999999999999999999999999999999998775 46788999
Q ss_pred EEEcccCc--cccccHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHH
Q 001411 914 GLVQQEPA--LFSTTIYENIKYGNED--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 985 (1082)
Q Consensus 914 ~~VpQdp~--Lf~gTIreNl~~~~~~--~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLA 985 (1082)
+|+||+|. +++.|+++|+.++... .+ ++.+.++++..++.++.. .....||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRH-----------RSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhc-----------CCcccCCHHHHHHHHHH
Confidence 99999985 6678999999875321 22 233445555555544433 33467999999999999
Q ss_pred HHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhh
Q 001411 986 RAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 986 RAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|||+++|+||||||||++||+.+...+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999865 4899999999999998899999999999999999999875
No 259
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-42 Score=377.82 Aligned_cols=216 Identities=30% Similarity=0.508 Sum_probs=188.9
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCc---cEEEECCccCCCCCHHHH
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPIS---GTVLIDGYDIRTLNLRSL 909 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~---G~I~idG~di~~i~~~~l 909 (1082)
+.|+++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++ |+|.+||.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 469999999999632 2469999999999999999999999999999999999999987 899999999988877788
Q ss_pred hcceEEEcccC--ccccccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHH
Q 001411 910 RRKIGLVQQEP--ALFSTTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 981 (1082)
Q Consensus 910 R~~i~~VpQdp--~Lf~gTIreNl~~~~~--~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 981 (1082)
|++++|+||+| .+++.|+++||.++.. ..+. +.+.++++.+++.++..+. ..+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSE-----------PANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCC-----------cccCCHHHHHH
Confidence 99999999998 4668899999986522 2233 2355667777776554443 36899999999
Q ss_pred HHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHh
Q 001411 982 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 982 laLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
++|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+..||+|++|++|++++.|+++++.
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999998753 78999999999999889999999999999999999987
Q ss_pred h
Q 001411 1060 R 1060 (1082)
Q Consensus 1060 ~ 1060 (1082)
.
T Consensus 232 ~ 232 (282)
T PRK13640 232 S 232 (282)
T ss_pred c
Confidence 5
No 260
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-42 Score=373.62 Aligned_cols=218 Identities=28% Similarity=0.465 Sum_probs=185.6
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC---CCCcEEEECCeeCCCCCHHHHhh
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE---PTSGKILLDGHDLKSLQLKWLRE 281 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~---~~~G~i~~~g~~~~~~~~~~~~~ 281 (1082)
.++++|+++.|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++...+...+|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 3789999999974 349999999999999999999999999999999999984 79999999999998877778888
Q ss_pred hceEEccCCCcChhcHHHHHhcCCCCC--------CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 001411 282 QMGLVSQEPALFATSIANNILLGKEDA--------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 282 ~i~~v~Q~~~l~~~ti~~ni~~g~~~~--------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~ 353 (1082)
.++|++|++.+|+.|++||+.++.... ..+++.++++..++.+++ .+...+.+.+||||||||++
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~qrv~ 152 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEV-------KDKLKQNALALSGGQQQRLC 152 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhh-------hHHhcCCcccCCHHHHHHHH
Confidence 999999999999999999998763110 112233344444433222 22345667899999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|||||+++|+++||||||++||+.+...+.+.|.++.+++|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 99999999999999999999999999999999998877899999999999876 5899999999999999999888653
No 261
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.4e-41 Score=360.36 Aligned_cols=203 Identities=36% Similarity=0.625 Sum_probs=179.6
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhc
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 283 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 283 (1082)
+.++++|++++|++...++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.|
T Consensus 5 ~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 84 (207)
T cd03369 5 GEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSSL 84 (207)
T ss_pred CeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46999999999975333599999999999999999999999999999999999999999999999999877777888899
Q ss_pred eEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCC
Q 001411 284 GLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPK 363 (1082)
Q Consensus 284 ~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~ 363 (1082)
+||+|+|.+|++|++||+.+... ...+++.++++ ++.....|||||+||++||||++.+|+
T Consensus 85 ~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p~ 145 (207)
T cd03369 85 TIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRPR 145 (207)
T ss_pred EEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999976542 23333333222 345667899999999999999999999
Q ss_pred eeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecCc
Q 001411 364 ILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTH 425 (1082)
Q Consensus 364 illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~ 425 (1082)
++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 146 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 146 VLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999988778999999999999878999999999999987753
No 262
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-41 Score=368.95 Aligned_cols=218 Identities=26% Similarity=0.417 Sum_probs=180.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHH-Hhcc
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS-LRRK 912 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~ 912 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +|+.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYG---KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeC---CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 489999999996 346999999999999999999999999999999999999999999999999998887654 6788
Q ss_pred eEEEcccCccccc-cHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccC
Q 001411 913 IGLVQQEPALFST-TIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 991 (1082)
Q Consensus 913 i~~VpQdp~Lf~g-TIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~ 991 (1082)
++|+||++.+|++ |+++|+.++....+..+..+.++ +.++.++ +++.........||||||||++||||++++
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIK-----WVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHH-----HHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999985 99999987532222222222111 1111111 111112234467999999999999999999
Q ss_pred CCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 992 PSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 992 ~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|+||||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999999865 48999999999998754 99999999999999999999975
No 263
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=371.94 Aligned_cols=218 Identities=30% Similarity=0.552 Sum_probs=186.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----ccEEEECCccCCCC--CH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPI-----SGTVLIDGYDIRTL--NL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~i--~~ 906 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~---~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYH---KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEEC---CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 589999999996 346999999999999999999999999999999999999997 69999999998653 45
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCC--CC-C----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNE--DA-S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~~-~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
..+|+.++||||+|.+|+.|+++|+.++.. .. . ++.+.++++..++++.+. ......+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCHHHH
Confidence 678999999999999999999999987421 11 1 123444555555544332 234456678999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667999999999999976 899999999999999999998
Q ss_pred hhh
Q 001411 1059 LRK 1061 (1082)
Q Consensus 1059 l~~ 1061 (1082)
...
T Consensus 234 ~~~ 236 (251)
T PRK14249 234 FSR 236 (251)
T ss_pred HhC
Confidence 754
No 264
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-42 Score=376.37 Aligned_cols=212 Identities=31% Similarity=0.563 Sum_probs=183.5
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++|++|+|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+..++++.|+
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999632 34999999999999999999999999999999999999999999999999998877788888999
Q ss_pred EEccCC--CcChhcHHHHHhcCCCC--CC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 285 LVSQEP--ALFATSIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 285 ~v~Q~~--~l~~~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
|++|+| .++..|+.||+.++... .+ .+++.++++..++.+...+.| ..||||||||++|||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~lar 151 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIAG 151 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999998 57888999999986321 11 134455555556555444443 489999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhh
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDL 428 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 428 (1082)
||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 152 aL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 152 VLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 9999999999999999999999999999999875 4789999999999985 5999999999999999998654
No 265
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.8e-42 Score=370.44 Aligned_cols=213 Identities=30% Similarity=0.470 Sum_probs=180.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHH-Hhcce
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS-LRRKI 913 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~i 913 (1082)
|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .++++
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYG---QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeC---CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 47899999996 346999999999999999999999999999999999999999999999999998877654 46789
Q ss_pred EEEcccCccccc-cHHHHhccCCCCC--CHHH-HHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHc
Q 001411 914 GLVQQEPALFST-TIYENIKYGNEDA--SEIE-LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAIL 989 (1082)
Q Consensus 914 ~~VpQdp~Lf~g-TIreNl~~~~~~~--~d~e-i~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL 989 (1082)
+|+||++.+|+. |+++|+.++.... ..++ ..++++..+ +++........+||||||||++|||||+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999986 9999998653221 1112 122222222 1222334455679999999999999999
Q ss_pred cCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 990 KNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 990 ~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~~ 221 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELDE 221 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcCh
Confidence 99999999999999999999999999998753 7899999999999975 99999999999999999999843
No 266
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-42 Score=374.07 Aligned_cols=221 Identities=32% Similarity=0.507 Sum_probs=188.2
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCCC--CC
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRT--LN 905 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~ 905 (1082)
+.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||+++.. .+
T Consensus 6 ~~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYN---TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEEC---CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 3599999999996 34699999999999999999999999999999999999985 48999999999864 44
Q ss_pred HHHHhcceEEEcccCccccccHHHHhccCCC------CCC-HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhH
Q 001411 906 LRSLRRKIGLVQQEPALFSTTIYENIKYGNE------DAS-EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQ 978 (1082)
Q Consensus 906 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~------~~~-d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQ 978 (1082)
...+|++++|+||+|.+|+.|+++|+.++.. ... ++.+.++++.+++.+++.. .....+..|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKD-------KLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 5678899999999999999999999976421 111 2335566777776554432 2234556799999
Q ss_pred HHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEe-----CCEEEEe
Q 001411 979 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQ-----QGKVAEI 1052 (1082)
Q Consensus 979 rQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~-----~G~ive~ 1052 (1082)
|||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999998777899999999999965 99999998 5999999
Q ss_pred cChHHHhhhcc
Q 001411 1053 GSHEQLLRKEN 1063 (1082)
Q Consensus 1053 G~~~eLl~~~~ 1063 (1082)
|+++++.+.+.
T Consensus 236 ~~~~~~~~~~~ 246 (259)
T PRK14260 236 GVTTQIFSNPL 246 (259)
T ss_pred CCHHHHhcCCC
Confidence 99999976443
No 267
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.5e-42 Score=370.43 Aligned_cols=213 Identities=31% Similarity=0.537 Sum_probs=181.7
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCC--HHHHhcc
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN--LRSLRRK 912 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--~~~lR~~ 912 (1082)
|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 2 l~~~~l~~~~~---~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFG---PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEEC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 78999999996 346999999999999999999999999999999999999999999999999987643 4567889
Q ss_pred eEEEcccCcccc-ccHHHHhccCCC---CCCHH----HHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHH
Q 001411 913 IGLVQQEPALFS-TTIYENIKYGNE---DASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 913 i~~VpQdp~Lf~-gTIreNl~~~~~---~~~d~----ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaL 984 (1082)
++|+||++.+|. .|+++|+.++.. ..+.. .+.++++..+ ++.........||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVG-----------LAERAHHYPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcC-----------ChHHHhcChhhcCHHHHHHHHH
Confidence 999999999886 599999986421 11222 2333344433 4333444556899999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhh
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
|||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999999999999875 47899999999999965 999999999999999999998753
No 268
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-42 Score=373.69 Aligned_cols=221 Identities=28% Similarity=0.480 Sum_probs=190.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++...+++.++
T Consensus 3 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYG---TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEEC---CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 78999999996 357999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEcccCccccc-cHHHHhccCCCC----------CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHH
Q 001411 915 LVQQEPALFST-TIYENIKYGNED----------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 983 (1082)
Q Consensus 915 ~VpQdp~Lf~g-TIreNl~~~~~~----------~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 983 (1082)
|+||++.+|.+ |+.+|+.++... ..++++.++++..++.+... .....||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLAD-----------RRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHc-----------CCcccCCHHHHHHHH
Confidence 99999998876 999999875211 11234556666666654432 234679999999999
Q ss_pred HHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhh
Q 001411 984 IARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 984 LARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
||||++++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~- 227 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT- 227 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC-
Confidence 9999999999999999999999999999999999865 47899999999999865 99999999999999999999875
Q ss_pred ccchHHHHHH
Q 001411 1062 ENGIYKQLIR 1071 (1082)
Q Consensus 1062 ~~g~f~~l~~ 1071 (1082)
...+.+.+.
T Consensus 228 -~~~~~~~~~ 236 (255)
T PRK11231 228 -PGLLRTVFD 236 (255)
T ss_pred -HHHHHHHhC
Confidence 244555553
No 269
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=5.7e-42 Score=365.45 Aligned_cols=203 Identities=34% Similarity=0.623 Sum_probs=173.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 1 i~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFG---NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEEC---CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 57899999996 34699999999999999999999999999999999999999999999999998766543 56899
Q ss_pred EEcccCcccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~-gTIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||++.+|. .|+++|+.++.. ..+ ++++.++++..++.++..+ ....||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDR-----------KPKQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhC-----------ChhhCCHHHHHHHHHHHH
Confidence 9999999885 699999986421 112 2234455666665544333 336799999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1053 (1082)
++++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|+++++|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999875 37899999999999876 9999999999999876
No 270
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=6.8e-42 Score=353.44 Aligned_cols=178 Identities=37% Similarity=0.661 Sum_probs=166.0
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+.+ +.++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999732 23699999999999999999999999999999999999999999999999988776 667889999
Q ss_pred EEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 001411 915 LVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSI 994 (1082)
Q Consensus 915 ~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~I 994 (1082)
|+||+|.+|+.|+++|+ ..+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 357999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCEEEEec
Q 001411 995 LLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 995 LlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G 1053 (1082)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999889999999999999865
No 271
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-41 Score=373.04 Aligned_cols=220 Identities=30% Similarity=0.495 Sum_probs=188.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCccCC--CCCH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIR--TLNL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~--~i~~ 906 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++. ..+.
T Consensus 10 ~l~i~~v~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYG---SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEEC---CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 499999999996 3469999999999999999999999999999999999986 37999999999985 3456
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCCC--C---CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNED--A---SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 981 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~--~---~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 981 (1082)
..+|++++|+||++.+|+.|+++|+.++... . .++++.++++.+++.+.+.. .....+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHH
Confidence 6788999999999999989999999875321 1 12345556677776554432 2344567899999999
Q ss_pred HHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEe---------CCEEEE
Q 001411 982 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQ---------QGKVAE 1051 (1082)
Q Consensus 982 laLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~---------~G~ive 1051 (1082)
++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|+ +|+|++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999988777899999999999865 99999998 899999
Q ss_pred ecChHHHhhhcc
Q 001411 1052 IGSHEQLLRKEN 1063 (1082)
Q Consensus 1052 ~G~~~eLl~~~~ 1063 (1082)
.|+++++.+.+.
T Consensus 240 ~~~~~~~~~~~~ 251 (264)
T PRK14243 240 FDRTEKIFNSPQ 251 (264)
T ss_pred eCCHHHHHhCCC
Confidence 999999986443
No 272
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-41 Score=374.92 Aligned_cols=220 Identities=29% Similarity=0.506 Sum_probs=185.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCccCCC--CCH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LNL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 906 (1082)
.++++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 24 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYG---EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEEC---CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 599999999996 3469999999999999999999999999999999999997 699999999999853 455
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCC--CCCH-----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNE--DASE-----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~~~d-----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
..+|++++|+||+|.+|..|+++|+.++.. ..++ +.+.++++..++.+ ++.......+.+||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWD-------ELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-------hHHHHHhcCcccCCHHHH
Confidence 678899999999999999999999986421 1221 12233344443322 222334456678999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999999
Q ss_pred hhhcc
Q 001411 1059 LRKEN 1063 (1082)
Q Consensus 1059 l~~~~ 1063 (1082)
...+.
T Consensus 254 ~~~~~ 258 (271)
T PRK14238 254 FSNPS 258 (271)
T ss_pred HcCCC
Confidence 86443
No 273
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-41 Score=372.26 Aligned_cols=227 Identities=30% Similarity=0.511 Sum_probs=190.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCCCC--CH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRTL--NL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 906 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++... +.
T Consensus 6 ~i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYG---EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEEC---CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 489999999996 34699999999999999999999999999999999999763 489999999999876 45
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCC--CC-C----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNE--DA-S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~~-~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
...|+.++|+||+|.+|+.|+++|+.++.. .. . ++.+.++++.+++.+.+ .+.....+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEV-------KDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhh-------HHHhhcChhhCCHHHH
Confidence 677889999999999999999999987521 11 1 22344555555543322 2334556678999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++||||++.+|+++||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999999965 999999999999999999999
Q ss_pred hhhccchHHHHH
Q 001411 1059 LRKENGIYKQLI 1070 (1082)
Q Consensus 1059 l~~~~g~f~~l~ 1070 (1082)
.+++...+.+.+
T Consensus 236 ~~~~~~~~~~~~ 247 (253)
T PRK14261 236 FENPHEELTENY 247 (253)
T ss_pred HhCCCcHHHHHH
Confidence 865444455444
No 274
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.2e-41 Score=370.14 Aligned_cols=218 Identities=34% Similarity=0.556 Sum_probs=181.7
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCC--------H
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN--------L 906 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--------~ 906 (1082)
++++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 4 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFH---GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEEC---CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 89999999996 346999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhcceEEEcccCcccc-ccHHHHhccCC---CCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 907 RSLRRKIGLVQQEPALFS-TTIYENIKYGN---EDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~-gTIreNl~~~~---~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
..+|++++||||++.+|+ .|+++|+.++. .....++..+. +.+.++.+ |++........+||||||||+
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv 153 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATAR-----ARELLAKV--GLAGKETSYPRRLSGGQQQRV 153 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CCcchhhCChhhCChHHHHHH
Confidence 567889999999999886 69999997631 11122221111 12233332 343334445678999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
+|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 233 (250)
T PRK11264 154 AIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFA 233 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999875 47899999999999965 99999999999999999999876
Q ss_pred hc
Q 001411 1061 KE 1062 (1082)
Q Consensus 1061 ~~ 1062 (1082)
.+
T Consensus 234 ~~ 235 (250)
T PRK11264 234 DP 235 (250)
T ss_pred CC
Confidence 43
No 275
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-41 Score=375.88 Aligned_cols=220 Identities=30% Similarity=0.556 Sum_probs=186.9
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCccCCC--CC
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LN 905 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 905 (1082)
..|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++.. .+
T Consensus 38 ~~l~i~~l~~~~~---~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYG---DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEEC---CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 3599999999996 3469999999999999999999999999999999999997 689999999999864 34
Q ss_pred HHHHhcceEEEcccCccccccHHHHhccCCC-----CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 906 LRSLRRKIGLVQQEPALFSTTIYENIKYGNE-----DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 906 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~-----~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
...+|++++||||++.+|+.|+++|+.++.. ...+++++++++..++...+.. .......+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKD-------QLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHH-------HHhCCcccCCHHHHH
Confidence 5678899999999999999999999986421 1123456666766665433221 233455689999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEE-EEeCCEEEEecChHHH
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIA-VLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~-Vl~~G~ive~G~~~eL 1058 (1082)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998767899999999999876 99975 5799999999999998
Q ss_pred hhhc
Q 001411 1059 LRKE 1062 (1082)
Q Consensus 1059 l~~~ 1062 (1082)
.+++
T Consensus 268 ~~~~ 271 (285)
T PRK14254 268 FENP 271 (285)
T ss_pred HhCc
Confidence 7643
No 276
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-42 Score=379.31 Aligned_cols=216 Identities=28% Similarity=0.505 Sum_probs=181.6
Q ss_pred EEEEEEEEECCCCC---CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCC----CCHHH
Q 001411 206 IEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKS----LQLKW 278 (1082)
Q Consensus 206 i~~~~v~~~y~~~~---~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~----~~~~~ 278 (1082)
|+++|++|+|+... ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997432 249999999999999999999999999999999999999999999999999863 33566
Q ss_pred HhhhceEEccCC--CcChhcHHHHHhcCCCCC--CHHH----HHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 279 LREQMGLVSQEP--ALFATSIANNILLGKEDA--SMDR----VIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 279 ~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~~~--~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
+|+.++||+|+| .+|+.|+.||+.|+.... +.++ +.++++..++. +........+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~----------~~~~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLA----------DEFWEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCC----------hhhccCCcccCCHHHHH
Confidence 788999999998 788899999999874321 2222 22333333321 12334556789999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDL 428 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 428 (1082)
|++|||||+.+|+++||||||++||+.+...+.+.|.++. +++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998875 4789999999999885 5999999999999999999988
Q ss_pred hhc
Q 001411 429 ISK 431 (1082)
Q Consensus 429 ~~~ 431 (1082)
...
T Consensus 232 ~~~ 234 (288)
T PRK13643 232 FQE 234 (288)
T ss_pred HcC
Confidence 653
No 277
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6e-42 Score=388.08 Aligned_cols=212 Identities=31% Similarity=0.497 Sum_probs=181.4
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...++ .++.|+
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 3789999999975 349999999999999999999999999999999999999999999999999976554 356799
Q ss_pred EEccCCCcChh-cHHHHHhcCCCC------CC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 001411 285 LVSQEPALFAT-SIANNILLGKED------AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~------~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~ 353 (1082)
||+|++.+|+. |++||+.++... .+ .+++.++++..++.+ .......+||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----------~~~~~~~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAH-----------LADRYPAQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCch-----------hhhCChhhCCHHHHHHHH
Confidence 99999999986 999999987431 11 123344444444433 334445689999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhh
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
|||||+.+|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998754 6899999999998754 89999999999999999999876
Q ss_pred c
Q 001411 431 K 431 (1082)
Q Consensus 431 ~ 431 (1082)
+
T Consensus 227 ~ 227 (353)
T PRK10851 227 E 227 (353)
T ss_pred C
Confidence 4
No 278
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-41 Score=378.25 Aligned_cols=217 Identities=34% Similarity=0.555 Sum_probs=182.5
Q ss_pred EEEEEEEEECCCCC---CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCC--HHHHh
Q 001411 206 IEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ--LKWLR 280 (1082)
Q Consensus 206 i~~~~v~~~y~~~~---~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~--~~~~~ 280 (1082)
|+++|++|+|++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...++
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997422 35999999999999999999999999999999999999999999999999997643 45678
Q ss_pred hhceEEccCC--CcChhcHHHHHhcCCCC--CCHH----HHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHH
Q 001411 281 EQMGLVSQEP--ALFATSIANNILLGKED--ASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRI 352 (1082)
Q Consensus 281 ~~i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri 352 (1082)
++||||+|+| .+|+.|++|||.++... .+.+ ++.++++.+++. +.+........||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 8999999998 57888999999986321 2222 233333333221 11345566789999999999
Q ss_pred HHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhh
Q 001411 353 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 353 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998753 789999999999875 59999999999999999998876
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
+.
T Consensus 234 ~~ 235 (287)
T PRK13637 234 KE 235 (287)
T ss_pred hC
Confidence 53
No 279
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-41 Score=370.87 Aligned_cols=224 Identities=32% Similarity=0.531 Sum_probs=191.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCccCCC--CCH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LNL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 906 (1082)
.++++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||.+++. .+.
T Consensus 3 ~l~~~~v~~~~~---~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFD---DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeC---CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 378999999996 3469999999999999999999999999999999999975 389999999999875 346
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCC--CC-C----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNE--DA-S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~~-~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
..+|++++|+||+|.+|+.|+++|+.++.. .. + ++.+.++++.+++.+++..+ ....+.+||+|||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK-------LDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH-------HhCCcccCCHHHH
Confidence 678999999999999999999999986421 11 1 23455667777776554421 2345568999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||+|||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999876 999999999999999999999
Q ss_pred hhhccchHH
Q 001411 1059 LRKENGIYK 1067 (1082)
Q Consensus 1059 l~~~~g~f~ 1067 (1082)
...+.+.+.
T Consensus 233 ~~~~~~~~~ 241 (250)
T PRK14266 233 FINPKDKRT 241 (250)
T ss_pred HhCCCChHH
Confidence 765555443
No 280
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5.4e-42 Score=388.74 Aligned_cols=214 Identities=29% Similarity=0.473 Sum_probs=183.4
Q ss_pred CCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCC--cEEEECCeeCCCCCHHHHh
Q 001411 203 AGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTS--GKILLDGHDLKSLQLKWLR 280 (1082)
Q Consensus 203 ~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~--G~i~~~g~~~~~~~~~~~~ 280 (1082)
.+.++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++ |+|.++|+++...++ .+
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 357999999999975 349999999999999999999999999999999999999999 999999999976655 35
Q ss_pred hhceEEccCCCcChh-cHHHHHhcCCCC--CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 001411 281 EQMGLVSQEPALFAT-SIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 281 ~~i~~v~Q~~~l~~~-ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~ 353 (1082)
+.|+||+|++.+|+. ||+|||.|+... .+. +++.++++..++.+ .......+|||||||||+
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~-----------~~~~~~~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGD-----------AAAHLPAQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCc-----------hhhCChhhCCHHHHHHHH
Confidence 679999999999977 999999986431 121 23444444444433 344445689999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC---CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhh
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS---NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~---~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|||||+.+|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999988754 689999999999875 59999999999999999999997
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
.+
T Consensus 228 ~~ 229 (362)
T TIGR03258 228 DA 229 (362)
T ss_pred hC
Confidence 65
No 281
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=9.1e-42 Score=366.06 Aligned_cols=205 Identities=30% Similarity=0.496 Sum_probs=172.5
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHH---Hh
Q 001411 835 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS---LR 910 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR 910 (1082)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996321 246999999999999999999999999999999999999999999999999998877654 34
Q ss_pred -cceEEEcccCcccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 911 -RKIGLVQQEPALFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 911 -~~i~~VpQdp~Lf~-gTIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
++++|+||+|.+|+ .|++||+.++.. ..+ .+++.++++..++. .........||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLE-----------HRINHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------hhhhCChhhCCHHHHHHH
Confidence 68999999999986 599999976311 111 12334444444443 333344567999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhccCEEEEEeCCEEE
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRNADKIAVLQQGKVA 1050 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~iv 1050 (1082)
+||||++++|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+..+|+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999999874 378999999999999889999999999986
No 282
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=369.97 Aligned_cols=212 Identities=30% Similarity=0.472 Sum_probs=179.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCC------CCCHHH
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIR------TLNLRS 908 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~------~i~~~~ 908 (1082)
|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...
T Consensus 3 l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYG---AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEEC---CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 78999999996 346999999999999999999999999999999999999999999999999873 123456
Q ss_pred HhcceEEEcccCccccc-cHHHHhccCC---CCCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 909 LRRKIGLVQQEPALFST-TIYENIKYGN---EDASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 909 lR~~i~~VpQdp~Lf~g-TIreNl~~~~---~~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
+|++++|+||+|.+|++ |+++|+..+. ..... +++.+.++..++ +........+|||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRL-----------KPYADRFPLHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-----------hhhhhCChhhCCHHHHH
Confidence 78899999999999975 9999997421 11122 223333444444 33334445689999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
|++||||++++|+||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999999875 47999999999999965 999999999999999999988
Q ss_pred hh
Q 001411 1059 LR 1060 (1082)
Q Consensus 1059 l~ 1060 (1082)
.+
T Consensus 229 ~~ 230 (242)
T PRK11124 229 TQ 230 (242)
T ss_pred cC
Confidence 65
No 283
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-42 Score=387.25 Aligned_cols=215 Identities=37% Similarity=0.589 Sum_probs=182.6
Q ss_pred EEEEEEEEECCC--CCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHH---Hh
Q 001411 206 IEFSEVCFAYPS--RPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW---LR 280 (1082)
Q Consensus 206 i~~~~v~~~y~~--~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~~ 280 (1082)
|+++|++|+|++ ...++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999972 2245999999999999999999999999999999999999999999999999998776543 47
Q ss_pred hhceEEccCCCcCh-hcHHHHHhcCCCC--CCHH----HHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 001411 281 EQMGLVSQEPALFA-TSIANNILLGKED--ASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 281 ~~i~~v~Q~~~l~~-~ti~~ni~~g~~~--~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~ 353 (1082)
++|+|++|++.+|+ .|++||+.++... .+.+ ++.+.++.. |++........+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELV-----------GLSDKADRYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CCchhhhCChhhCCHHHHHHHH
Confidence 78999999999887 5999999876321 1222 223333333 3443444556789999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhh
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998753 7899999999999865 99999999999999999999876
Q ss_pred c
Q 001411 431 K 431 (1082)
Q Consensus 431 ~ 431 (1082)
.
T Consensus 231 ~ 231 (343)
T PRK11153 231 H 231 (343)
T ss_pred C
Confidence 5
No 284
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=8.7e-42 Score=365.95 Aligned_cols=211 Identities=24% Similarity=0.422 Sum_probs=177.0
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
|+++|+++.|++...++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+++.++|
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEEE
Confidence 478999999975224599999999999999999999999999999999999999999999999998654 3566778999
Q ss_pred EccCCCcCh-hcHHHHHhcCCCC--CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhc
Q 001411 286 VSQEPALFA-TSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 358 (1082)
Q Consensus 286 v~Q~~~l~~-~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal 358 (1082)
++|++.+++ .|++||+.++... ... +++.++++..++. ........+||||||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLT-----------DKANKRARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-----------HHHhChhhhCCHHHHHHHHHHHHH
Confidence 999999884 6999999874211 111 2233333333332 223344568999999999999999
Q ss_pred ccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhh
Q 001411 359 LRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 428 (1082)
Q Consensus 359 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 428 (1082)
+.+|+++||||||++||+.+.+.+.+.|.++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999998777999999999999865 899999999999999988764
No 285
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-41 Score=369.86 Aligned_cols=204 Identities=31% Similarity=0.486 Sum_probs=178.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 12 ~l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYG---ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEEC---CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 499999999996 346999999999999999999999999999999999999999999999998753 567899
Q ss_pred EEEcccCcccc-ccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCC
Q 001411 914 GLVQQEPALFS-TTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP 992 (1082)
Q Consensus 914 ~~VpQdp~Lf~-gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~ 992 (1082)
+|+||++.+|+ .|+++|+.++.....++++.++++..++.+.. .....+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRA-----------NEWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHh-----------cCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 69999998753222345566677777665443 3344689999999999999999999
Q ss_pred CEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChH
Q 001411 993 SILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHE 1056 (1082)
Q Consensus 993 ~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~ 1056 (1082)
++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999999864 37899999999999865 9999999999999988754
No 286
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-42 Score=367.13 Aligned_cols=205 Identities=35% Similarity=0.521 Sum_probs=174.1
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 835 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
|+++|++++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999996311 1479999999999999999999999999999999999999999999999998863 46789
Q ss_pred EEEcccCcccc-ccHHHHhccCCC--CC----CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 914 GLVQQEPALFS-TTIYENIKYGNE--DA----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 914 ~~VpQdp~Lf~-gTIreNl~~~~~--~~----~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
+||||+|.+|+ .|+++|+.++.. .. .++++.++++..++.++..+ ...+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENA-----------YPHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhC-----------CcccCCHHHHHHHHHHH
Confidence 99999999987 699999976421 11 12345566666666544433 33579999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEe--CCEEEEecCh
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQ--QGKVAEIGSH 1055 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~--~G~ive~G~~ 1055 (1082)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999874 37899999999998865 99999999 7999998764
No 287
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=373.92 Aligned_cols=216 Identities=31% Similarity=0.481 Sum_probs=185.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++|++++|+.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 49999999999732 24699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEcccCc--cccccHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHH
Q 001411 914 GLVQQEPA--LFSTTIYENIKYGNED--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 985 (1082)
Q Consensus 914 ~~VpQdp~--Lf~gTIreNl~~~~~~--~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLA 985 (1082)
+|+||+|. ++..|+++|+.++... .. ++++.++++..++.++. .....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERA-----------DYEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------hCCcccCCHHHHHHHHHH
Confidence 99999994 4456899999764221 12 22344555555554332 234467999999999999
Q ss_pred HHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhccCEEEEEeCCEEEEecChHHHhhh
Q 001411 986 RAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 986 RAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
||++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||||++|++|++++.|+++++...
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 7899999999999988999999999999999999998763
No 288
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.9e-42 Score=368.27 Aligned_cols=211 Identities=38% Similarity=0.617 Sum_probs=183.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+ +.++++|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .++.++
T Consensus 1 l~~~~l~~~~~---~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYG---GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeC---CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 47999999996 3469999999999999999999999999999999999999999999999999987654 367899
Q ss_pred EEcccCccccc-cHHHHhccCCC------CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFST-TIYENIKYGNE------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~g-TIreNl~~~~~------~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||++.+|.+ |+++|+.++.. ...++++.++++..++.++..+.| .+||+|||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999975 99999986421 112345566666666665554433 5799999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhh
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999999999999999999999998753 7999999999999865 999999999999999999998764
No 289
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-42 Score=357.47 Aligned_cols=217 Identities=33% Similarity=0.599 Sum_probs=188.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCc---cCCCCCHHHHh
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGY---DIRTLNLRSLR 910 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~---di~~i~~~~lR 910 (1082)
.|+++|++..|+ ..++++|||++|+.||.+|+.||||||||||++++.|+..|++|.|.+||. |.++++.+ .
T Consensus 2 ~i~i~~~~~~~~---~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~--~ 76 (345)
T COG1118 2 SIRINNVKKRFG---AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVR--D 76 (345)
T ss_pred ceeehhhhhhcc---cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchh--h
Confidence 378899999996 457899999999999999999999999999999999999999999999999 77764433 4
Q ss_pred cceEEEcccCcccc-ccHHHHhccCCC----CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHH
Q 001411 911 RKIGLVQQEPALFS-TTIYENIKYGNE----DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 981 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~-gTIreNl~~~~~----~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 981 (1082)
++||+|+|+..||. .||++||.||.. ..+ ...+.+-|+.+++.++-++-| .+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHH
Confidence 67999999999986 699999999852 122 334455566676665555444 6899999999
Q ss_pred HHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 982 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 982 laLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
+||||||...|++|+||||.++||..-.+.+++-|++... ++|+++|||+.+.+.. ||||+||++|+|...|+|+|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 9999999999999999999999999999999999998753 7899999999999855 999999999999999999999
Q ss_pred hhhccchH
Q 001411 1059 LRKENGIY 1066 (1082)
Q Consensus 1059 l~~~~g~f 1066 (1082)
...+++.|
T Consensus 226 ~~~P~s~f 233 (345)
T COG1118 226 YDHPASRF 233 (345)
T ss_pred hcCCCccc
Confidence 88777655
No 290
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-41 Score=370.36 Aligned_cols=219 Identities=31% Similarity=0.515 Sum_probs=186.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCCCC--CH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRTL--NL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 906 (1082)
.|+++|++++|+ +.++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYG---EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEEC---CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 589999999996 34699999999999999999999999999999999999985 799999999998653 34
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCCC--C-C----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNED--A-S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~--~-~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
..+|++++|+||++.+|+.|+++|+.++... . + .+++.++++.+++.+.+. .........||+|||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVK-------DDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHHH
Confidence 5678999999999999999999999864211 1 1 123455666666543322 123345568999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++||||++++|+||||||||++||+.+.+.+.+.|++..++.|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999999865 999999999999999999999
Q ss_pred hhhc
Q 001411 1059 LRKE 1062 (1082)
Q Consensus 1059 l~~~ 1062 (1082)
...+
T Consensus 234 ~~~~ 237 (251)
T PRK14270 234 FLEP 237 (251)
T ss_pred hcCC
Confidence 7643
No 291
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-41 Score=370.66 Aligned_cols=212 Identities=37% Similarity=0.619 Sum_probs=179.8
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCC---HHHHhhh
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ---LKWLREQ 282 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~---~~~~~~~ 282 (1082)
++++|++++|++. ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ ...+++.
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4689999999751 34999999999999999999999999999999999999999999999999988766 4567788
Q ss_pred ceEEccCCCcCh-hcHHHHHhcCCCCC-----------C---HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChH
Q 001411 283 MGLVSQEPALFA-TSIANNILLGKEDA-----------S---MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGG 347 (1082)
Q Consensus 283 i~~v~Q~~~l~~-~ti~~ni~~g~~~~-----------~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgG 347 (1082)
++|++|++.+|+ .|++||+.++.... . .+++.++ ++.+ |+.......+.+||||
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~~--~l~~~~~~~~~~LS~G 148 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAA---------LERV--GLLDKAYQRADQLSGG 148 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHH---------HHHc--CChhhhCCCcccCCHH
Confidence 999999998887 59999998753210 1 1122222 3332 3444455667799999
Q ss_pred HHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecC
Q 001411 348 QKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGT 424 (1082)
Q Consensus 348 qkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~ 424 (1082)
||||++|||||+.+|+++||||||++||+.+...+.+.|+++. .++|+|++||+++.+. .||++++|++|++++.|+
T Consensus 149 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 228 (241)
T cd03256 149 QQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGP 228 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecC
Confidence 9999999999999999999999999999999999999999874 3789999999999987 589999999999999999
Q ss_pred chhhh
Q 001411 425 HVDLI 429 (1082)
Q Consensus 425 ~~~l~ 429 (1082)
++++.
T Consensus 229 ~~~~~ 233 (241)
T cd03256 229 PAELT 233 (241)
T ss_pred HHHhh
Confidence 88763
No 292
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-41 Score=372.05 Aligned_cols=220 Identities=29% Similarity=0.490 Sum_probs=186.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCCCCC-HH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRTLN-LR 907 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i~-~~ 907 (1082)
.++++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ..
T Consensus 21 ~l~i~nl~~~~~---~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFA---GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEEC---CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 589999999996 35799999999999999999999999999999999999986 6999999999988763 45
Q ss_pred HHhcceEEEcccCccccccHHHHhccCCC---CCCHHHHH----HHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 908 SLRRKIGLVQQEPALFSTTIYENIKYGNE---DASEIELM----KATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 908 ~lR~~i~~VpQdp~Lf~gTIreNl~~~~~---~~~d~ei~----~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
.+|++++|+||+|.+|+.|+++|+.++.. ..++++.. +.++..++.+ .+++.......+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWD-------AVKDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCc-------hhhhHhhCCcccCCHHHHH
Confidence 67899999999999999999999986421 12444432 2333333322 1223345566789999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHh
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999865 9999999999999999999998
Q ss_pred hhcc
Q 001411 1060 RKEN 1063 (1082)
Q Consensus 1060 ~~~~ 1063 (1082)
+.+.
T Consensus 251 ~~~~ 254 (276)
T PRK14271 251 SSPK 254 (276)
T ss_pred hCcC
Confidence 7543
No 293
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-41 Score=367.48 Aligned_cols=215 Identities=34% Similarity=0.560 Sum_probs=184.1
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++|++|+|++. ++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFGK--EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCCe--eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 48999999999753 4999999999999999999999999999999999999999999999999998777777888999
Q ss_pred EEccCCCcChhcHHHHHhcCCCCCC--HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCC
Q 001411 285 LVSQEPALFATSIANNILLGKEDAS--MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 362 (1082)
Q Consensus 285 ~v~Q~~~l~~~ti~~ni~~g~~~~~--~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~ 362 (1082)
|++|++.+|+.|++||+.++..... .+++.+.++..++.+ .........||||||||++||||++.+|
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrl~la~al~~~p 150 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNK----------EYATRDVKNLSGGEAQRVSIARTLANNP 150 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCH----------HHhhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999999999987643211 223333333333210 1234456789999999999999999999
Q ss_pred CeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhc
Q 001411 363 KILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 363 ~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
+++||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 151 EVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999874 37899999999998764 899999999999999999988754
No 294
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=7.5e-42 Score=364.80 Aligned_cols=201 Identities=37% Similarity=0.569 Sum_probs=174.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHH---HHhc
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SLRR 911 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR~ 911 (1082)
|+++|++++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 34699999999999999999999999999999999999999999999999999887643 4788
Q ss_pred ceEEEcccCcccc-ccHHHHhccCCC------CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHH
Q 001411 912 KIGLVQQEPALFS-TTIYENIKYGNE------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 912 ~i~~VpQdp~Lf~-gTIreNl~~~~~------~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaL 984 (1082)
+++|+||+|.+|. .|+++|+.++.. ...+++++++++..++.+...+.| .+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999986 699999986421 112345667777777765544332 5799999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCE
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGK 1048 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1048 (1082)
||||+++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999874 48999999999999976 99999999985
No 295
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1e-41 Score=389.44 Aligned_cols=214 Identities=26% Similarity=0.504 Sum_probs=187.3
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++|++++|++ ..+|+|+||++++||+++|+||||||||||+|+|+|+++|++|+|.++|+++..++...++++||
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4889999999975 34999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEccCCCc-ChhcHHHHHhcCCCCC----------CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 001411 285 LVSQEPAL-FATSIANNILLGKEDA----------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 285 ~v~Q~~~l-~~~ti~~ni~~g~~~~----------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~ 353 (1082)
||+|++.+ ++.|++||+.++.... ..+++.++++..++.+.. .....+||||||||++
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~-----------~~~~~~LSgGerQRv~ 149 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFA-----------DRPVTSLSGGERQRVL 149 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHH
Confidence 99999987 5679999999875211 123455555555554433 3345689999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|||||+++|++|||||||++||+.++..+++.|+++. +++|+|++||+++.+. .||++++|++|++++.|++++++..
T Consensus 150 IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 150 LARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 9999999999999999999999999999999999885 4789999999999985 5999999999999999999998764
No 296
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.3e-41 Score=372.25 Aligned_cols=226 Identities=29% Similarity=0.471 Sum_probs=185.1
Q ss_pred EEEEeEEEECCCC------CCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHH
Q 001411 835 IELRNVSFKYPVR------PDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS 908 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~------~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~ 908 (1082)
|+++||+++|+.. .+.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 1357999999999999999999999999999999999999999999999999998876543
Q ss_pred ---HhcceEEEcccCc--cc-cccHHHHhccCCC---CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCC
Q 001411 909 ---LRRKIGLVQQEPA--LF-STTIYENIKYGNE---DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 975 (1082)
Q Consensus 909 ---lR~~i~~VpQdp~--Lf-~gTIreNl~~~~~---~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LS 975 (1082)
+|++++|+||+|. ++ ..|+++|+.++.. ... ++++.++++..++.+ ......+..||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~LS 152 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRS----------EDADKLPRQLS 152 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCChhhCC
Confidence 6788999999983 44 4699999964211 111 223344444443321 22344557899
Q ss_pred hhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEe
Q 001411 976 GGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEI 1052 (1082)
Q Consensus 976 gGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~ 1052 (1082)
||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.
T Consensus 153 gGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 232 (265)
T TIGR02769 153 GGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEE 232 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEE
Confidence 9999999999999999999999999999999999999999998753 7899999999999975 999999999999999
Q ss_pred cChHHHhhhccchHHHHH
Q 001411 1053 GSHEQLLRKENGIYKQLI 1070 (1082)
Q Consensus 1053 G~~~eLl~~~~g~f~~l~ 1070 (1082)
|++++++..++..++++.
T Consensus 233 g~~~~~~~~~~~~~~~~~ 250 (265)
T TIGR02769 233 CDVAQLLSFKHPAGRNLQ 250 (265)
T ss_pred CCHHHHcCCCCHHHHHHH
Confidence 999999874333444454
No 297
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-41 Score=368.95 Aligned_cols=211 Identities=31% Similarity=0.509 Sum_probs=178.0
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 78 (239)
T cd03296 3 IEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGF 78 (239)
T ss_pred EEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEE
Confidence 789999999975 349999999999999999999999999999999999999999999999999875543 2567999
Q ss_pred EccCCCcCh-hcHHHHHhcCCCCC------CH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 001411 286 VSQEPALFA-TSIANNILLGKEDA------SM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 354 (1082)
Q Consensus 286 v~Q~~~l~~-~ti~~ni~~g~~~~------~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~l 354 (1082)
++|+|.+|+ .|++||+.++.... .. +++.++++.. |++........+||||||||++|
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrl~l 147 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLV-----------QLDWLADRYPAQLSGGQRQRVAL 147 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHc-----------CChhhhhcChhhCCHHHHHHHHH
Confidence 999999886 49999998764211 11 1222333333 33334445567899999999999
Q ss_pred HHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 355 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 355 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
||||+.+|+++||||||++||+++.+.+.+.|.++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 148 ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 9999999999999999999999999999999998753 689999999999875 4899999999999999999887643
No 298
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-41 Score=369.93 Aligned_cols=212 Identities=30% Similarity=0.465 Sum_probs=185.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++...++++++
T Consensus 3 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLG---GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 78999999996 346999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEcccCcc-ccccHHHHhccCCCCC------CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPAL-FSTTIYENIKYGNEDA------SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~L-f~gTIreNl~~~~~~~------~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||++.+ +..|+++|+.++.... .++.+.++++..++.+... .....||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAG-----------RDYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhc-----------CCcccCCHHHHHHHHHHHH
Confidence 99999987 6789999998743211 1234556666666654332 2346799999999999999
Q ss_pred Hc------cCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHH
Q 001411 988 IL------KNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 988 lL------~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
|+ ++|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+. .||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999875 4789999999999986 4999999999999999999998
Q ss_pred hh
Q 001411 1059 LR 1060 (1082)
Q Consensus 1059 l~ 1060 (1082)
.+
T Consensus 229 ~~ 230 (258)
T PRK13548 229 LT 230 (258)
T ss_pred hC
Confidence 75
No 299
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=380.94 Aligned_cols=228 Identities=26% Similarity=0.396 Sum_probs=185.9
Q ss_pred EEEEeEEEECCCCCC-cccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc----CCccEEEECCccCCCCCHHHH
Q 001411 835 IELRNVSFKYPVRPD-ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD----PISGTVLIDGYDIRTLNLRSL 909 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~-~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~----p~~G~I~idG~di~~i~~~~l 909 (1082)
|+++||+++|+.+.. .++|+||||+|++||.+||||+||||||||+++|+|+++ |++|+|.+||.|+.+++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 899999999974222 369999999999999999999999999999999999998 489999999999999887665
Q ss_pred hc----ceEEEcccCc--ccc-ccHHHH----hccCCC---CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCC
Q 001411 910 RR----KIGLVQQEPA--LFS-TTIYEN----IKYGNE---DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 975 (1082)
Q Consensus 910 R~----~i~~VpQdp~--Lf~-gTIreN----l~~~~~---~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LS 975 (1082)
|+ +|+||||+|. +++ -|+.+| +..... ....+.+.++++.+++.+.. ........+||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~l~~~p~~LS 155 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPA--------SRLDVYPHQLS 155 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhCCchhCC
Confidence 43 6999999995 443 355544 433111 11123456667777664321 11234556899
Q ss_pred hhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh-ccCEEEEEeCCEEEEe
Q 001411 976 GGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEI 1052 (1082)
Q Consensus 976 gGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~ 1052 (1082)
||||||++|||||+.+|++||+||||++||+.+...|.+.|++..+ +.|+|+|||+++.+. .||||+||++|+|+|.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998753 789999999999995 5999999999999999
Q ss_pred cChHHHhhhccchHHHHH
Q 001411 1053 GSHEQLLRKENGIYKQLI 1070 (1082)
Q Consensus 1053 G~~~eLl~~~~g~f~~l~ 1070 (1082)
|+++++++++...|.+.+
T Consensus 236 g~~~~~~~~p~hpyt~~l 253 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQAL 253 (326)
T ss_pred CCHHHHhhCCCChHHHHH
Confidence 999999986666666543
No 300
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-41 Score=373.15 Aligned_cols=213 Identities=29% Similarity=0.451 Sum_probs=187.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++++
T Consensus 7 ~l~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 7 RLRGEQLTLGYG---KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred EEEEEEEEEEEC---CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 599999999996 34699999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEcccCcccc-ccHHHHhccCC-CC---------CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 914 GLVQQEPALFS-TTIYENIKYGN-ED---------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 914 ~~VpQdp~Lf~-gTIreNl~~~~-~~---------~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
+|+||++.+|. .|+++|+.++. +. ..++.++++++..++.++.. .....||||||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLAD-----------QSVDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhc-----------CCcccCChHHHHHH
Confidence 99999998875 69999998642 11 11234566677666655432 34467999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHh
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
+||||++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999998865 9999999999999999999987
Q ss_pred h
Q 001411 1060 R 1060 (1082)
Q Consensus 1060 ~ 1060 (1082)
.
T Consensus 233 ~ 233 (265)
T PRK10253 233 T 233 (265)
T ss_pred h
Confidence 5
No 301
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=374.77 Aligned_cols=212 Identities=30% Similarity=0.466 Sum_probs=181.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCC--CCCHHHHhcc
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIR--TLNLRSLRRK 912 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~--~i~~~~lR~~ 912 (1082)
|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|++
T Consensus 2 l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQ---DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcC---CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 78999999996 346999999999999999999999999999999999999999999999999985 3445678899
Q ss_pred eEEEcccCc--cccccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHH
Q 001411 913 IGLVQQEPA--LFSTTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 913 i~~VpQdp~--Lf~gTIreNl~~~~~--~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaL 984 (1082)
++||||+|. +|..|+.+|+.++.. ..+. +++.++++..++.++. .....+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-----------HQPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-----------cCCchhCCHHHHHHHHH
Confidence 999999985 577899999976311 1222 2344555555554432 22346799999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFA 225 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999874 47899999999999965 99999999999999999999875
No 302
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.3e-41 Score=382.67 Aligned_cols=229 Identities=28% Similarity=0.458 Sum_probs=187.5
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC---ccEEEECCccCCCCCHHHH
Q 001411 834 NIELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPI---SGTVLIDGYDIRTLNLRSL 909 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~---~G~I~idG~di~~i~~~~l 909 (1082)
.++++|++++|+.+. ..++|+||||+|++||++||+|+||||||||+++|+|+++|. +|+|.+||.|+..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 489999999996322 246999999999999999999999999999999999999996 9999999999999887765
Q ss_pred h----cceEEEcccC--cccc-ccHHHHhccC---CCCCCHHH----HHHHHHHhcHHHHHhhCcccccccccCCCCCCC
Q 001411 910 R----RKIGLVQQEP--ALFS-TTIYENIKYG---NEDASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 975 (1082)
Q Consensus 910 R----~~i~~VpQdp--~Lf~-gTIreNl~~~---~~~~~d~e----i~~al~~a~l~~~i~~lp~gldt~v~e~G~~LS 975 (1082)
| ++|+|||||| .+++ -|+.+|+... ....+.++ +.+.++.+++ |++. ..++..+.+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL-------~~~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKM-------PEAR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-------CChH-HHhcCCcccCC
Confidence 3 4799999999 4554 4777766421 11123222 3333443333 3322 22455677899
Q ss_pred hhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEe
Q 001411 976 GGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEI 1052 (1082)
Q Consensus 976 gGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~ 1052 (1082)
||||||++|||||+.+|++||+|||||+||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998754 7899999999999975 999999999999999
Q ss_pred cChHHHhhhccchHHHHH
Q 001411 1053 GSHEQLLRKENGIYKQLI 1070 (1082)
Q Consensus 1053 G~~~eLl~~~~g~f~~l~ 1070 (1082)
|+++++++++...|.+.+
T Consensus 244 g~~~~i~~~p~~pyt~~l 261 (330)
T PRK09473 244 GNARDVFYQPSHPYSIGL 261 (330)
T ss_pred CCHHHHHhCCCCHHHHHH
Confidence 999999987666676643
No 303
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=377.65 Aligned_cols=219 Identities=33% Similarity=0.540 Sum_probs=181.5
Q ss_pred cccEEEEeEEEECCCCC--CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCC----C-
Q 001411 832 KGNIELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRT----L- 904 (1082)
Q Consensus 832 ~g~I~~~~Vs~~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~----i- 904 (1082)
.+.|+++|++++|+.++ ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 36799999999997432 1359999999999999999999999999999999999999999999999998852 2
Q ss_pred CHHHHhcceEEEcccC--ccccccHHHHhccCCC--CCCHHHHH----HHHHHhcHHHHHhhCcccccccccCCCCCCCh
Q 001411 905 NLRSLRRKIGLVQQEP--ALFSTTIYENIKYGNE--DASEIELM----KATKAANAHGFISRMPEGYQSHVGDRGVQLSG 976 (1082)
Q Consensus 905 ~~~~lR~~i~~VpQdp--~Lf~gTIreNl~~~~~--~~~d~ei~----~al~~a~l~~~i~~lp~gldt~v~e~G~~LSg 976 (1082)
+...+|++++|+||+| .+|..|+++|+.++.. ....++.. +.++..+ +|++ ........|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~-------L~~~---~~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQ-------LPED---YVKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-------CChh---HhcCChhhCCH
Confidence 4567889999999998 4778899999986421 12233322 2222222 2211 23345568999
Q ss_pred hHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 001411 977 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 977 GQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1053 (1082)
|||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g 233 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIG 233 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999998753 7899999999999854 9999999999999999
Q ss_pred ChHHHhh
Q 001411 1054 SHEQLLR 1060 (1082)
Q Consensus 1054 ~~~eLl~ 1060 (1082)
+++++.+
T Consensus 234 ~~~~~~~ 240 (289)
T PRK13645 234 SPFEIFS 240 (289)
T ss_pred CHHHHhc
Confidence 9998865
No 304
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.5e-41 Score=370.36 Aligned_cols=217 Identities=31% Similarity=0.515 Sum_probs=182.5
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCC-----CcEEEECCeeCCCC--CHHH
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT-----SGKILLDGHDLKSL--QLKW 278 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~-----~G~i~~~g~~~~~~--~~~~ 278 (1082)
++++|++++|++. .+++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++... +...
T Consensus 2 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGEK--EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECCe--eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 7899999999753 4999999999999999999999999999999999999998 99999999998753 3556
Q ss_pred HhhhceEEccCCCcChhcHHHHHhcCCCC---CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHH
Q 001411 279 LREQMGLVSQEPALFATSIANNILLGKED---ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 351 (1082)
Q Consensus 279 ~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqr 351 (1082)
+++.++|++|++.+|+.|++||+.++... ... +++.++++..++.+++ .........+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~qr 152 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEV-------KDRLHDSALGLSGGQQQR 152 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcch-------hhHhhCCcccCCHHHHHH
Confidence 78899999999999999999999875321 111 2233344444332111 033455667899999999
Q ss_pred HHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhh
Q 001411 352 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 352 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 153 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 153 LCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999999999998876789999999999876 489999999999999999988764
Q ss_pred c
Q 001411 431 K 431 (1082)
Q Consensus 431 ~ 431 (1082)
.
T Consensus 233 ~ 233 (247)
T TIGR00972 233 N 233 (247)
T ss_pred C
Confidence 3
No 305
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-41 Score=374.57 Aligned_cols=216 Identities=32% Similarity=0.530 Sum_probs=181.6
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCC----CHHH
Q 001411 835 IELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL----NLRS 908 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~~ 908 (1082)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997321 14699999999999999999999999999999999999999999999999998764 3567
Q ss_pred HhcceEEEcccC--ccccccHHHHhccCCC--CCCHHHH----HHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 909 LRRKIGLVQQEP--ALFSTTIYENIKYGNE--DASEIEL----MKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 909 lR~~i~~VpQdp--~Lf~gTIreNl~~~~~--~~~d~ei----~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
+|++|+|+||+| .+|+.|+++|+.++.. ..+.++. .++++..++.+ ........+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISE----------SLFEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHHH
Confidence 889999999998 6888999999986421 1233332 22333333321 1234455679999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
|++|||||+++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999875 47899999999999865 999999999999999999998
Q ss_pred hh
Q 001411 1059 LR 1060 (1082)
Q Consensus 1059 l~ 1060 (1082)
.+
T Consensus 233 ~~ 234 (280)
T PRK13649 233 FQ 234 (280)
T ss_pred hc
Confidence 75
No 306
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-41 Score=375.88 Aligned_cols=216 Identities=33% Similarity=0.555 Sum_probs=181.2
Q ss_pred cEEEEeEEEECCCCC--CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCC----CHH
Q 001411 834 NIELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL----NLR 907 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~ 907 (1082)
.|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 14699999999999999999999999999999999999999999999999998653 345
Q ss_pred HHhcceEEEcccC--ccccccHHHHhccCCC--CCCHHH----HHHHHHHhcHHHHHhhCcccccc-cccCCCCCCChhH
Q 001411 908 SLRRKIGLVQQEP--ALFSTTIYENIKYGNE--DASEIE----LMKATKAANAHGFISRMPEGYQS-HVGDRGVQLSGGQ 978 (1082)
Q Consensus 908 ~lR~~i~~VpQdp--~Lf~gTIreNl~~~~~--~~~d~e----i~~al~~a~l~~~i~~lp~gldt-~v~e~G~~LSgGQ 978 (1082)
..|+.++|+||+| .+|..|+++|+.++.. ..+.++ +.++++.++ ++. .......+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g-----------L~~~~~~~~~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVG-----------LSEDLISKSPFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------CChhHhhCCcccCCHHH
Confidence 6788999999998 5888899999976421 122222 233333433 331 2234456899999
Q ss_pred HHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-ccCEEEEEeCCEEEEecChH
Q 001411 979 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHE 1056 (1082)
Q Consensus 979 rQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~ 1056 (1082)
|||++|||||+++|++|||||||++||+.+.+.+.+.|++.. ++.|||++||+++.+. .||+|++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999875 4789999999999986 49999999999999999999
Q ss_pred HHhh
Q 001411 1057 QLLR 1060 (1082)
Q Consensus 1057 eLl~ 1060 (1082)
++++
T Consensus 231 ~~~~ 234 (287)
T PRK13641 231 EIFS 234 (287)
T ss_pred HHhc
Confidence 9875
No 307
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.3e-41 Score=385.51 Aligned_cols=209 Identities=29% Similarity=0.439 Sum_probs=177.4
Q ss_pred cccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCc----cCCCCCHHHH---h-cceEEEcccCc
Q 001411 850 ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGY----DIRTLNLRSL---R-RKIGLVQQEPA 921 (1082)
Q Consensus 850 ~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~----di~~i~~~~l---R-~~i~~VpQdp~ 921 (1082)
..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. ++...+...+ | ++|+||||++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 35899999999999999999999999999999999999999999999995 6777765554 3 58999999999
Q ss_pred ccc-ccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 001411 922 LFS-TTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSI 994 (1082)
Q Consensus 922 Lf~-gTIreNl~~~~~--~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~I 994 (1082)
+|+ .|+++|+.++.. ..+. +...++++.+++.++..+ ...+||||||||++|||||+++|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~-----------~~~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADK-----------KPGELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 997 699999987531 1122 334566666666554333 3357999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHHhhhccchHHHH
Q 001411 995 LLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLRKENGIYKQL 1069 (1082)
Q Consensus 995 LlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~l 1069 (1082)
||||||||+||+.+.+.+++.|.+..+ ++|+|+|||+++.+. .||||++|++|++++.|++++++.++...|.+.
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~~~ 263 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVAD 263 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHHHH
Confidence 999999999999999999999998753 789999999999985 599999999999999999999987655545443
No 308
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.7e-41 Score=369.51 Aligned_cols=211 Identities=35% Similarity=0.601 Sum_probs=178.3
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCH---HHHhhh
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL---KWLREQ 282 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~~~~ 282 (1082)
++++|++++|+. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++.
T Consensus 2 l~~~~l~~~~~~-~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPN-GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCC-CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 679999999972 2349999999999999999999999999999999999999999999999999876653 346788
Q ss_pred ceEEccCCCcChh-cHHHHHhcCCCCC-----------C---HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChH
Q 001411 283 MGLVSQEPALFAT-SIANNILLGKEDA-----------S---MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGG 347 (1082)
Q Consensus 283 i~~v~Q~~~l~~~-ti~~ni~~g~~~~-----------~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgG 347 (1082)
++|++|++.+|+. |++||+.++.... . .+++.++ ++.+ |+.........+||||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~~--~l~~~~~~~~~~LSgG 149 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSA---------LERV--GLADKAYQRADQLSGG 149 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHH---------HHHc--CcHhhhcCCcccCCHH
Confidence 9999999998874 9999998764211 0 1122222 3333 4444455667799999
Q ss_pred HHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecC
Q 001411 348 QKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGT 424 (1082)
Q Consensus 348 qkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~ 424 (1082)
||||++|||||+.+|+++||||||++||+.+.+.+.+.|.++. .++|+|++||+++.+. .||++++|++|++++.|+
T Consensus 150 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 229 (243)
T TIGR02315 150 QQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGA 229 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCC
Confidence 9999999999999999999999999999999999999999874 3689999999999985 589999999999999999
Q ss_pred chhh
Q 001411 425 HVDL 428 (1082)
Q Consensus 425 ~~~l 428 (1082)
++++
T Consensus 230 ~~~~ 233 (243)
T TIGR02315 230 PSEL 233 (243)
T ss_pred HHHh
Confidence 8876
No 309
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-42 Score=364.46 Aligned_cols=203 Identities=36% Similarity=0.581 Sum_probs=170.6
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEEE
Confidence 468999999975 349999999999999999999999999999999999999999999999999876443 4678999
Q ss_pred EccCCCcCh-hcHHHHHhcCCCCC--CH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhc
Q 001411 286 VSQEPALFA-TSIANNILLGKEDA--SM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 358 (1082)
Q Consensus 286 v~Q~~~l~~-~ti~~ni~~g~~~~--~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal 358 (1082)
++|++.++. .|++||+.++.... .. +++.++++.. |++........+||||||||++|||||
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgG~~qrl~la~al 145 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELV-----------GLEGLLNRYPHELSGGQQQRVALARAL 145 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHc-----------CChhhhhcChhhCCHHHHHHHHHHHHH
Confidence 999998886 49999998753211 11 2233333333 333334445568999999999999999
Q ss_pred ccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCcccccc-CCEEEEEeCCEEEEec
Q 001411 359 LRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 423 (1082)
Q Consensus 359 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g 423 (1082)
+.+|+++||||||++||+.+.+.+.+.|.++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999874 37899999999998754 8999999999998765
No 310
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=376.72 Aligned_cols=220 Identities=32% Similarity=0.593 Sum_probs=184.7
Q ss_pred cEEEEEEEEECCCCC---CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCC----CHH
Q 001411 205 QIEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL----QLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~---~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~----~~~ 277 (1082)
.++++|++|+|++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997422 3599999999999999999999999999999999999999999999999998653 345
Q ss_pred HHhhhceEEccCC--CcChhcHHHHHhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccc-cccCCCCCCChHHHHHH
Q 001411 278 WLREQMGLVSQEP--ALFATSIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQT-QVGEGGTQLSGGQKQRI 352 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t-~~g~~g~~LSgGqkqri 352 (1082)
.+|+.||||+|+| .+|+.|+.|||.++... .+.++..+. +.+.++.+ |+++ .....+.+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv 154 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKI 154 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHH
Confidence 6788999999997 68888999999986422 122222221 12333333 6653 45567789999999999
Q ss_pred HHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhh
Q 001411 353 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 353 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
+|||||+.+|+++||||||++||+.+...+.+.|+++. .++|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 155 ~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 155 AIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred HHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999874 3789999999999875 58999999999999999998886
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
+.
T Consensus 235 ~~ 236 (286)
T PRK13646 235 KD 236 (286)
T ss_pred hC
Confidence 54
No 311
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-41 Score=368.08 Aligned_cols=217 Identities=27% Similarity=0.478 Sum_probs=183.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHH-Hhcc
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS-LRRK 912 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~ 912 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYK---GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 388999999996 347999999999999999999999999999999999999999999999999998877644 5789
Q ss_pred eEEEcccCccccc-cHHHHhccCCC---CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHH
Q 001411 913 IGLVQQEPALFST-TIYENIKYGNE---DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAI 988 (1082)
Q Consensus 913 i~~VpQdp~Lf~g-TIreNl~~~~~---~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAl 988 (1082)
++|+||++.+|++ |++||+.++.. ..+.++. ...+.++++.+ |++.........||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 9999999998874 99999986421 1122211 11223344443 444445556678999999999999999
Q ss_pred ccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 989 LKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 989 L~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
+++|++|||||||++||+.+.+.+.+.+++.. +++|+|++||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999999999998865 47899999999988755 99999999999999999999875
No 312
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-41 Score=371.00 Aligned_cols=219 Identities=29% Similarity=0.449 Sum_probs=183.4
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCC--CCH
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKS--LQL 276 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~~ 276 (1082)
..++++|++++|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 6 AIIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred ceEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 46999999999974 3499999999999999999999999999999999999997 49999999998853 344
Q ss_pred HHHhhhceEEccCCCcChhcHHHHHhcCCCCC---C----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHH
Q 001411 277 KWLREQMGLVSQEPALFATSIANNILLGKEDA---S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQK 349 (1082)
Q Consensus 277 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqk 349 (1082)
..+++.|+|++|++.+|+.|++|||.++.... . .+++.++++..++.+.+ ++. ....+.+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~----~~~~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDK----LNTNALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHH----HhCCcccCCHHHH
Confidence 56788899999999999899999998864211 1 12334444444432211 122 3345678999999
Q ss_pred HHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhh
Q 001411 350 QRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 428 (1082)
Q Consensus 350 qri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 428 (1082)
||++|||||+.+|+++||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999998754 899999999999999999988
Q ss_pred hhc
Q 001411 429 ISK 431 (1082)
Q Consensus 429 ~~~ 431 (1082)
.++
T Consensus 237 ~~~ 239 (254)
T PRK14273 237 FFN 239 (254)
T ss_pred HhC
Confidence 654
No 313
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-41 Score=371.55 Aligned_cols=223 Identities=30% Similarity=0.498 Sum_probs=190.0
Q ss_pred cccccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCC--
Q 001411 830 EIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIR-- 902 (1082)
Q Consensus 830 ~~~g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~-- 902 (1082)
+..+.|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 12 ~~~~~l~~~~l~~~~~---~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~ 88 (265)
T PRK14252 12 PTQQKSEVNKLNFYYG---GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNIL 88 (265)
T ss_pred CCCceEEEEEEEEEEC---CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccc
Confidence 4456799999999996 34699999999999999999999999999999999999975 7999999998874
Q ss_pred --CCCHHHHhcceEEEcccCccccccHHHHhccCCC--C-----CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCC
Q 001411 903 --TLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNE--D-----ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQ 973 (1082)
Q Consensus 903 --~i~~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~-----~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~ 973 (1082)
......+|++++|+||++.+|.+|+++|+.++.. . ..++++.++++.+++.+.+ ....+.....
T Consensus 89 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~ 161 (265)
T PRK14252 89 SPEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEV-------KDRLGDLAFN 161 (265)
T ss_pred ccccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhh-------hHHHhCCccc
Confidence 3345678899999999999999999999986421 1 1134566666666654322 2334455678
Q ss_pred CChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEe
Q 001411 974 LSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEI 1052 (1082)
Q Consensus 974 LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~ 1052 (1082)
||||||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 162 LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~ 241 (265)
T PRK14252 162 LSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEF 241 (265)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999999988767899999999999965 999999999999999
Q ss_pred cChHHHhhhc
Q 001411 1053 GSHEQLLRKE 1062 (1082)
Q Consensus 1053 G~~~eLl~~~ 1062 (1082)
|+++++...+
T Consensus 242 g~~~~~~~~~ 251 (265)
T PRK14252 242 GATDTIFIKP 251 (265)
T ss_pred CCHHHHHhCC
Confidence 9999997533
No 314
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=371.91 Aligned_cols=218 Identities=29% Similarity=0.510 Sum_probs=183.9
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC-----CCCcEEEECCeeCCC--CCHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~~~ 277 (1082)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+..
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999974 349999999999999999999999999999999999974 689999999999864 3455
Q ss_pred HHhhhceEEccCCCcChhcHHHHHhcCCCC--C-C----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 278 WLREQMGLVSQEPALFATSIANNILLGKED--A-S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
.+++.++|++|++.+|+.|++||+.++... . . .+++.++++..++.+.+ .+..+....+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~q 156 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEV-------KDRLHESALGLSGGQQQ 156 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCHHHHH
Confidence 678899999999999989999999875311 1 1 22344444444443222 22345667799999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++|||||+.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999876789999999999885 59999999999999999998876
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
+.
T Consensus 237 ~~ 238 (253)
T PRK14242 237 TR 238 (253)
T ss_pred cC
Confidence 53
No 315
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.9e-41 Score=365.28 Aligned_cols=211 Identities=36% Similarity=0.560 Sum_probs=181.7
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+ +.++|+|+||+|.+||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 i~i~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFG---SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEEC---CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 57899999996 3469999999999999999999999999999999999999999999999999886653 478899
Q ss_pred EEcccCccccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~g-TIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||+|.+|++ |+++|+.++.. ..+ ++++.++++..++.++.. ....+||+||+||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGD-----------RYPNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------CChhhCCHHHHHHHHHHHH
Confidence 99999999975 99999986432 111 233455555555544433 2336799999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhh
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
++++|+++||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999998654 7899999999999865 999999999999999999999753
No 316
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=377.37 Aligned_cols=216 Identities=29% Similarity=0.485 Sum_probs=181.3
Q ss_pred EEEEEEEEECCCCC---CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCC----CCHHH
Q 001411 206 IEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKS----LQLKW 278 (1082)
Q Consensus 206 i~~~~v~~~y~~~~---~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~----~~~~~ 278 (1082)
++++|++|+|++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997422 359999999999999999999999999999999999999999999999999863 34556
Q ss_pred HhhhceEEccCC--CcChhcHHHHHhcCCCC--CCHH----HHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 279 LREQMGLVSQEP--ALFATSIANNILLGKED--ASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 279 ~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
+++.|+||+|+| .+|+.|++|||.++... .+.+ ++.++++..++.+ .........|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPE----------ELLARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCh----------hhhhCCcccCCHHHHH
Confidence 778899999998 68888999999987432 1222 2333333333321 1234556789999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVD 427 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 427 (1082)
|++|||||+.+|+++||||||++||+.+...+.+.|+++.+ +.|+|++||+++.+. .||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998753 789999999999875 599999999999999999988
Q ss_pred hhhc
Q 001411 428 LISK 431 (1082)
Q Consensus 428 l~~~ 431 (1082)
+.+.
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 8654
No 317
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-41 Score=370.90 Aligned_cols=218 Identities=32% Similarity=0.532 Sum_probs=184.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCCC--CCH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRT--LNL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~~ 906 (1082)
.++++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 4 ~l~i~~v~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYG---SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEEC---CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 489999999996 34699999999999999999999999999999999999974 69999999999853 445
Q ss_pred HHHhcceEEEcccCcccc-ccHHHHhccCCC---CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhH
Q 001411 907 RSLRRKIGLVQQEPALFS-TTIYENIKYGNE---DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQ 978 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~-gTIreNl~~~~~---~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQ 978 (1082)
..+|+.++|++|++.+|+ .|+++|+.++.. ..+ ++.+.++++.+++.+.+. ........+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVK-------DRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHH
Confidence 678899999999999997 599999975421 111 233455566666543321 22334556799999
Q ss_pred HHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEe------CCEEEE
Q 001411 979 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQ------QGKVAE 1051 (1082)
Q Consensus 979 rQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~------~G~ive 1051 (1082)
|||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 99999999999999999999999999999999999999988667899999999999864 99999997 899999
Q ss_pred ecChHHHhhh
Q 001411 1052 IGSHEQLLRK 1061 (1082)
Q Consensus 1052 ~G~~~eLl~~ 1061 (1082)
.|++++++..
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999999764
No 318
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.4e-41 Score=362.80 Aligned_cols=202 Identities=35% Similarity=0.534 Sum_probs=173.0
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCH---HHHhc
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL---RSLRR 911 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~ 911 (1082)
|+++|++++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPN--GTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCC--CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 478999999963 2469999999999999999999999999999999999999999999999999987754 35788
Q ss_pred ceEEEcccCcccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHH
Q 001411 912 KIGLVQQEPALFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 912 ~i~~VpQdp~Lf~-gTIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaL 984 (1082)
+++||||+|.+|+ .|+++|+.++.. ..+ ++++.++++..++.+...+ ...+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRA-----------LPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------ChhhcCHHHHHHHHH
Confidence 9999999999998 499999986421 112 2345566666666544333 335799999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEE
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKV 1049 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~i 1049 (1082)
||||+++|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 57999999999999976 999999999974
No 319
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-41 Score=377.54 Aligned_cols=215 Identities=27% Similarity=0.471 Sum_probs=180.0
Q ss_pred EEEEEEEEECCCCC---CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCC---------
Q 001411 206 IEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKS--------- 273 (1082)
Q Consensus 206 i~~~~v~~~y~~~~---~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~--------- 273 (1082)
|+++|++|+|++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+...
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 78999999997532 249999999999999999999999999999999999999999999999877531
Q ss_pred ---------------CCHHHHhhhceEEccCC--CcChhcHHHHHhcCCCC--CCHH----HHHHHHHHhchHHHHhcCC
Q 001411 274 ---------------LQLKWLREQMGLVSQEP--ALFATSIANNILLGKED--ASMD----RVIEAAKAANAHSFVEGLP 330 (1082)
Q Consensus 274 ---------------~~~~~~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~----~~~~~~~~~~~~~~i~~lp 330 (1082)
.+...+++.||||+|+| .+|..||+|||.|+... ...+ ++.++++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~---------- 152 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELV---------- 152 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHc----------
Confidence 13456788999999986 67888999999987432 2222 233333333
Q ss_pred CCcc-ccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccc-cc
Q 001411 331 DGYQ-TQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTV-RD 407 (1082)
Q Consensus 331 ~g~~-t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~-~~ 407 (1082)
|++ ........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+ +.
T Consensus 153 -gL~~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~ 231 (305)
T PRK13651 153 -GLDESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEW 231 (305)
T ss_pred -CCChhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHh
Confidence 332 23455667899999999999999999999999999999999999999999998875 478999999999977 45
Q ss_pred CCEEEEEeCCEEEEecCchhhhhc
Q 001411 408 VDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 408 ~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
||||++|++|++++.|+++++.+.
T Consensus 232 adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 232 TKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999988654
No 320
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.2e-41 Score=362.35 Aligned_cols=201 Identities=42% Similarity=0.682 Sum_probs=171.8
Q ss_pred EEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEE
Q 001411 836 ELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGL 915 (1082)
Q Consensus 836 ~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~ 915 (1082)
+++||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 478999999631 2469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EcccCc--cccccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 916 VQQEPA--LFSTTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 916 VpQdp~--Lf~gTIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
+||+|. ++..|+++|+.++.. ..+ ++++.+.++..++.++. ......||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLR-----------DRSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCHHHHHHHHHHHH
Confidence 999983 678899999976421 112 22344455555554433 33446799999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCE
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGK 1048 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1048 (1082)
|+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999999875 47899999999999987 99999999985
No 321
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=9.9e-42 Score=363.46 Aligned_cols=198 Identities=30% Similarity=0.535 Sum_probs=169.3
Q ss_pred EEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEE
Q 001411 836 ELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGL 915 (1082)
Q Consensus 836 ~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~ 915 (1082)
+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++|
T Consensus 1 ~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYG---GHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEEC---CEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 3689999996 346999999999999999999999999999999999999999999999998764 47889999
Q ss_pred EcccCcc---ccccHHHHhccCCCC----------CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 916 VQQEPAL---FSTTIYENIKYGNED----------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 916 VpQdp~L---f~gTIreNl~~~~~~----------~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
+||+|.+ |+.|++||+.++... ..++++.++++..++.++..+ ...+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADR-----------QIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHH
Confidence 9999986 568999999864321 112346666777666554432 3357999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1053 (1082)
+|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999999875 57899999999999965 9999999986 55554
No 322
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.1e-41 Score=364.65 Aligned_cols=207 Identities=33% Similarity=0.514 Sum_probs=171.1
Q ss_pred EEEEEEEEECCCCC--CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHH----HH
Q 001411 206 IEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK----WL 279 (1082)
Q Consensus 206 i~~~~v~~~y~~~~--~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~----~~ 279 (1082)
++++|++++|++.. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 46899999997521 3599999999999999999999999999999999999999999999999998776543 24
Q ss_pred hhhceEEccCCCcChh-cHHHHHhcCCCCC--CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 280 REQMGLVSQEPALFAT-SIANNILLGKEDA--SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 280 ~~~i~~v~Q~~~l~~~-ti~~ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
++.++|++|++.+|+. |++||+.++.... ...+.. ..+.+.++.+ |++........+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERR-----ERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHH-----HHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 5689999999999886 9999998864321 111111 1112233333 4444455566789999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccccCCEEEEEeCCEE
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRDVDTIMVLKNGQV 419 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~~d~i~~l~~G~i 419 (1082)
||+.+|+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+..||++++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999998854 7899999999998888999999999974
No 323
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-41 Score=368.90 Aligned_cols=224 Identities=29% Similarity=0.435 Sum_probs=191.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCCCC--CH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRTL--NL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 906 (1082)
.+.+++++++|. +.++|+|+||+|+|||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 8 ~~~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYG---NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 388999999995 34799999999999999999999999999999999999987 799999999998643 44
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCC-----CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNE-----DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 981 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~-----~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 981 (1082)
..+|++++|+||+|.+|..|+++|+.++.. ....+++.++++.+++.+.+.. ..++...+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHH
Confidence 567889999999999999999999987521 1123456777777776554432 2345667899999999
Q ss_pred HHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEe--------CCEEEEe
Q 001411 982 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQ--------QGKVAEI 1052 (1082)
Q Consensus 982 laLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~--------~G~ive~ 1052 (1082)
++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998777899999999999865 99999996 8999999
Q ss_pred cChHHHhhhccchHH
Q 001411 1053 GSHEQLLRKENGIYK 1067 (1082)
Q Consensus 1053 G~~~eLl~~~~g~f~ 1067 (1082)
|+++++++++...+.
T Consensus 238 g~~~~~~~~~~~~~~ 252 (261)
T PRK14263 238 GPTAQIFQNPREQLT 252 (261)
T ss_pred CCHHHHHhCCCcHHH
Confidence 999999864443343
No 324
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-41 Score=370.48 Aligned_cols=222 Identities=29% Similarity=0.503 Sum_probs=188.6
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----ccEEEECCccCCC--CC
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPI-----SGTVLIDGYDIRT--LN 905 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--i~ 905 (1082)
+.|+++||+++|+ +.++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+
T Consensus 6 ~~l~~~nl~~~~~---~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYD---TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeC---CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 3699999999996 236999999999999999999999999999999999999985 8999999999853 34
Q ss_pred HHHHhcceEEEcccCccccccHHHHhccCC------CCCC-HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhH
Q 001411 906 LRSLRRKIGLVQQEPALFSTTIYENIKYGN------EDAS-EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQ 978 (1082)
Q Consensus 906 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~------~~~~-d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQ 978 (1082)
...+|+.++|+||++.+|+.|++||+.++. +... ++.+.++++.+++.+++.. ..+..+..|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKH-------KIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 567889999999999999999999997642 1111 2345566667766544432 2344567899999
Q ss_pred HHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEeC-----CEEE
Q 001411 979 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQ-----GKVA 1050 (1082)
Q Consensus 979 rQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~-----G~iv 1050 (1082)
|||++|||||+++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999999853 48999999999999865 999999999 9999
Q ss_pred EecChHHHhhhccc
Q 001411 1051 EIGSHEQLLRKENG 1064 (1082)
Q Consensus 1051 e~G~~~eLl~~~~g 1064 (1082)
+.|+|+++.+.+..
T Consensus 236 ~~~~~~~~~~~~~~ 249 (261)
T PRK14258 236 EFGLTKKIFNSPHD 249 (261)
T ss_pred EeCCHHHHHhCCCC
Confidence 99999999865443
No 325
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.4e-41 Score=378.72 Aligned_cols=213 Identities=29% Similarity=0.473 Sum_probs=180.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYG---DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeC---CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 489999999996 34699999999999999999999999999999999999999999999999998754 35678999
Q ss_pred EEEcccCcccc-ccHHHHhccCCC--CCCHHHH----HHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 914 GLVQQEPALFS-TTIYENIKYGNE--DASEIEL----MKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 914 ~~VpQdp~Lf~-gTIreNl~~~~~--~~~d~ei----~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
+|+||++.+|. .|+++|+.+... ..+..+. .++++..++ ++.+++.+ ..||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l-------~~~~~~~~----~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARL-------ESKADVRV----ALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCC-------hhHhcCch----hhCCHHHHHHHHHHH
Confidence 99999999885 699999974211 1233332 233333333 22334443 569999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhh
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999874 47899999999999965 999999999999999999999753
No 326
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-41 Score=374.41 Aligned_cols=226 Identities=30% Similarity=0.481 Sum_probs=187.6
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCccCCCC--C
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRTL--N 905 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~i--~ 905 (1082)
..|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +
T Consensus 38 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 38 PHVVAKNFSIYYG---EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred eEEEEeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 3589999999996 3469999999999999999999999999999999999865 4999999999998643 3
Q ss_pred HHHHhcceEEEcccCccccccHHHHhccCCC--CC-C----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhH
Q 001411 906 LRSLRRKIGLVQQEPALFSTTIYENIKYGNE--DA-S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQ 978 (1082)
Q Consensus 906 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~~-~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQ 978 (1082)
...+|++++||||+|.+|+.|++||+.++.. .. + ++.+.++++..++.+.+. .........|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS-------DRLDKNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh-------hHhhCChhhCCHHH
Confidence 3467899999999999999999999986421 11 1 223445555555432221 12234456799999
Q ss_pred HHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHH
Q 001411 979 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQ 1057 (1082)
Q Consensus 979 rQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~e 1057 (1082)
|||++|||||+++|++|||||||++||+++.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999865 99999999999999999999
Q ss_pred HhhhccchHHH
Q 001411 1058 LLRKENGIYKQ 1068 (1082)
Q Consensus 1058 Ll~~~~g~f~~ 1068 (1082)
+.+++...|.+
T Consensus 268 ~~~~~~~~~~~ 278 (286)
T PRK14275 268 LFTNPKDRMTE 278 (286)
T ss_pred HHhCCCcHHHH
Confidence 98754444433
No 327
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-41 Score=367.58 Aligned_cols=219 Identities=31% Similarity=0.546 Sum_probs=186.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCC-CCCHH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIR-TLNLR 907 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~-~i~~~ 907 (1082)
.++++|++++|+ +.++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+..
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYG---ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEEC---CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 489999999996 34699999999999999999999999999999999999986 5999999999986 45667
Q ss_pred HHhcceEEEcccCccccccHHHHhccCCC--CC-C----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 908 SLRRKIGLVQQEPALFSTTIYENIKYGNE--DA-S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 908 ~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~~-~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
.+|+.++|+||+|.+|+.|+++|+.++.. .. . ++++.++++.+++.+.+. .........|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHH
Confidence 88999999999999999999999986421 11 1 123444555555543322 2234445679999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHh
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
|++|||||+.+|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998767899999999999876 9999999999999999999987
Q ss_pred hhc
Q 001411 1060 RKE 1062 (1082)
Q Consensus 1060 ~~~ 1062 (1082)
.++
T Consensus 233 ~~~ 235 (249)
T PRK14253 233 SNP 235 (249)
T ss_pred cCC
Confidence 543
No 328
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-41 Score=365.73 Aligned_cols=214 Identities=36% Similarity=0.566 Sum_probs=180.0
Q ss_pred EEEEEEEEECCCCC--CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHH---HHh
Q 001411 206 IEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK---WLR 280 (1082)
Q Consensus 206 i~~~~v~~~y~~~~--~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~ 280 (1082)
|+++|++++|+++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68999999997531 1599999999999999999999999999999999999999999999999998776543 347
Q ss_pred hhceEEccCCCcCh-hcHHHHHhcCCCC--CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 001411 281 EQMGLVSQEPALFA-TSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 281 ~~i~~v~Q~~~l~~-~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~ 353 (1082)
+.++|++|++.+|+ .|++||+.++... .+. +++.+.++.. |++........+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELV-----------GLEDKADAYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHC-----------CChhhhhcChhhCCHHHHHHHH
Confidence 78999999999997 5999999875321 111 2233333333 3444444555789999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhh
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
||||++.+|+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998743 7899999999999865 89999999999999998887754
No 329
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-41 Score=387.40 Aligned_cols=212 Identities=31% Similarity=0.501 Sum_probs=181.2
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...++. ++.|+
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 4899999999974 3499999999999999999999999999999999999999999999999999766543 46799
Q ss_pred EEccCCCcChh-cHHHHHhcCCCC--CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHh
Q 001411 285 LVSQEPALFAT-SIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 357 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARa 357 (1082)
||+|++.+|+. |++|||.++... ... +++.++++..++.+ .......+|||||||||+||||
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-----------~~~~~~~~LSgGq~QRvaLAra 147 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAH-----------LLDRKPKALSGGQRQRVAIGRT 147 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChh-----------hhcCChhhCCHHHHHHHHHHHH
Confidence 99999999976 999999987431 111 23444455444433 3344456899999999999999
Q ss_pred cccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 358 VLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 358 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|+.+|++||||||||+||+.+++.+.+.|+++.+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 148 L~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 148 LVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999999988743 789999999999875 5899999999999999999988654
No 330
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-41 Score=373.88 Aligned_cols=213 Identities=35% Similarity=0.567 Sum_probs=181.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCC--CCHHHHhcc
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRT--LNLRSLRRK 912 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~--i~~~~lR~~ 912 (1082)
|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++. .+...+|++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999962 3469999999999999999999999999999999999999999999999999853 334568899
Q ss_pred eEEEcccC--ccccccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHH
Q 001411 913 IGLVQQEP--ALFSTTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 913 i~~VpQdp--~Lf~gTIreNl~~~~~--~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaL 984 (1082)
|+|+||+| .+|+.|+++|+.++.. ..+. +.+.++++..++.++. + .....||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-------~----~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFE-------N----KPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhh-------c----CChhhCCHHHHHHHHH
Confidence 99999998 4788999999976421 1222 2344555555554332 2 2345799999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhh
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
|||++++|++|||||||++||+.+...+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFS 226 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999875 47899999999999875 99999999999999999999875
No 331
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.1e-41 Score=363.63 Aligned_cols=216 Identities=26% Similarity=0.446 Sum_probs=178.3
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHH-hhhce
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL-REQMG 284 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~i~ 284 (1082)
|+++|++++|++. ++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.... ++.++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGKS--QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCCe--eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 4789999999753 49999999999999999999999999999999999999999999999999887766544 56799
Q ss_pred EEccCCCcChh-cHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCC
Q 001411 285 LVSQEPALFAT-SIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPK 363 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~ 363 (1082)
|++|++.+|+. |++||+.++.......+..+ +...+.+.+.. ++........+||||||||++|||||+.+|+
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~--~~~~~l~~~~~----l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 152 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKA--RLERVYELFPR----LKERRKQLAGTLSGGEQQMLAIARALMSRPK 152 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHH--HHHHHHHHHHh----hhhhhhCchhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999887 99999988643221111111 11111122211 2233445667899999999999999999999
Q ss_pred eeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhh
Q 001411 364 ILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 364 illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
++||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 153 LLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred EEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 999999999999999999999998875 47899999999998755 8999999999999999887764
No 332
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.2e-41 Score=360.30 Aligned_cols=199 Identities=31% Similarity=0.532 Sum_probs=169.5
Q ss_pred EEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEE
Q 001411 207 EFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLV 286 (1082)
Q Consensus 207 ~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v 286 (1082)
+++|++++|++. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ..+++.++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 367999999752 349999999999999999999999999999999999999999999999998753 4567789999
Q ss_pred ccCC--CcChhcHHHHHhcCCCCC--CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCC
Q 001411 287 SQEP--ALFATSIANNILLGKEDA--SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 362 (1082)
Q Consensus 287 ~Q~~--~l~~~ti~~ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~ 362 (1082)
+|++ .+++.|++||+.++.+.. ..+++.++++..++.++.++ ....||||||||++|||||+.+|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKER-----------HPLSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCC-----------CchhCCHHHHHHHHHHHHHHhCC
Confidence 9998 467789999998864322 22455666666655444333 33589999999999999999999
Q ss_pred CeeEEeCcccCCCHHHHHHHHHHHHHH-cCCCeEEEEccCcccccc-CCEEEEEeCCEEE
Q 001411 363 KILLLDEATSALDAESELIVQRALEKI-MSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVV 420 (1082)
Q Consensus 363 ~illlDEpts~LD~~~~~~i~~~l~~~-~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~ 420 (1082)
+++||||||++||+.+.+.+.+.|+++ .+++|+|++||+++.+.. ||++++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 999999999999999999999999987 457899999999999864 8999999999874
No 333
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.5e-40 Score=365.33 Aligned_cols=219 Identities=30% Similarity=0.499 Sum_probs=193.1
Q ss_pred CCCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhh
Q 001411 202 LAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLRE 281 (1082)
Q Consensus 202 ~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~ 281 (1082)
..+.|+++|+++.. .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 36 ~~~~l~i~nls~~~----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g------------- 98 (282)
T cd03291 36 DDNNLFFSNLCLVG----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG------------- 98 (282)
T ss_pred CCCeEEEEEEEEec----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------
Confidence 34579999999962 3499999999999999999999999999999999999999999999998
Q ss_pred hceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccC
Q 001411 282 QMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRN 361 (1082)
Q Consensus 282 ~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~ 361 (1082)
.|+|++|++++++.|++||+.++... ...++.++++..++.+.+..+|.++++.+++.+..||||||||++|||||+.+
T Consensus 99 ~i~yv~q~~~l~~~tv~enl~~~~~~-~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~ 177 (282)
T cd03291 99 RISFSSQFSWIMPGTIKENIIFGVSY-DEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKD 177 (282)
T ss_pred EEEEEeCcccccccCHHHHhhccccc-CHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcC
Confidence 39999999999999999999986432 23445566777788888999999999999999999999999999999999999
Q ss_pred CCeeEEeCcccCCCHHHHHHHHHHH-HHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhcCchhHHH
Q 001411 362 PKILLLDEATSALDAESELIVQRAL-EKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAAL 438 (1082)
Q Consensus 362 ~~illlDEpts~LD~~~~~~i~~~l-~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 438 (1082)
|++|||||||++||+.+...+.+.+ ..+.+++|+|++||+++.+..||++++|++|++++.|+++++......|...
T Consensus 178 p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~ 255 (282)
T cd03291 178 ADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSLRPDFSSK 255 (282)
T ss_pred CCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhcchHHHHH
Confidence 9999999999999999999888754 5555678999999999999889999999999999999999987654445433
No 334
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=4.7e-41 Score=359.41 Aligned_cols=210 Identities=29% Similarity=0.501 Sum_probs=186.7
Q ss_pred EEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCH----HHHhc
Q 001411 836 ELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL----RSLRR 911 (1082)
Q Consensus 836 ~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~----~~lR~ 911 (1082)
.+.|+.|+|+. +.++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~--~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGS--GLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCC--CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 57899999973 3579999999999999999999999999999999999999999999999998876542 34577
Q ss_pred ceEEEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccC
Q 001411 912 KIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 991 (1082)
Q Consensus 912 ~i~~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~ 991 (1082)
.++|++|+|.+|+.|+++|+.++.+ .++++..++++..++.+.+..+|.|+++.++....+||||||||++||||++++
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999999999999987543 345667788889999888999999999999988899999999999999999999
Q ss_pred CCEEEeeCCCCCCCHHHHHHHHH--HHHHhc-CCceEEEEecCchhhhccCEEEEEeCCE
Q 001411 992 PSILLLDEATSALDTASENLIQE--ALDKLM-EGRTTIMVAHRLSTIRNADKIAVLQQGK 1048 (1082)
Q Consensus 992 ~~ILlLDEaTS~LD~~te~~I~~--~l~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1048 (1082)
|++|||||||++||+.+.+.+.+ .++... .+.|+|++||+++.+..||++++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998887 454443 3689999999999998899999999984
No 335
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-41 Score=370.51 Aligned_cols=220 Identities=32% Similarity=0.531 Sum_probs=185.8
Q ss_pred CCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC-----CCCcEEEECCeeCCC--CC
Q 001411 203 AGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQ 275 (1082)
Q Consensus 203 ~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~ 275 (1082)
.+.++++|++++|++. ++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~~--~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGKF--HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCCe--EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 3569999999999753 49999999999999999999999999999999999986 589999999999853 45
Q ss_pred HHHHhhhceEEccCCCcChhcHHHHHhcCCCC---CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHH
Q 001411 276 LKWLREQMGLVSQEPALFATSIANNILLGKED---ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQ 348 (1082)
Q Consensus 276 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGq 348 (1082)
...+|++|+|++|++.+|+.|++||+.++... .+. +++.++++..++.+ ++....++...+|||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWN-------EVKDKLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCCh-------hhHHHHhcCCCCCCHHH
Confidence 56778899999999999999999999876321 122 23444444444322 22234566778999999
Q ss_pred HHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchh
Q 001411 349 KQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVD 427 (1082)
Q Consensus 349 kqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 427 (1082)
|||++|||||+.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 241 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDT 241 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999998876789999999999885 589999999999999999988
Q ss_pred hhhc
Q 001411 428 LISK 431 (1082)
Q Consensus 428 l~~~ 431 (1082)
+...
T Consensus 242 ~~~~ 245 (260)
T PRK10744 242 IFTK 245 (260)
T ss_pred HHhC
Confidence 8653
No 336
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=3.4e-41 Score=369.37 Aligned_cols=212 Identities=28% Similarity=0.436 Sum_probs=184.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
++++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 2 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAG---GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEEC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 78999999996 347999999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEcccCc-cccccHHHHhccCCCC----------CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHH
Q 001411 915 LVQQEPA-LFSTTIYENIKYGNED----------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 983 (1082)
Q Consensus 915 ~VpQdp~-Lf~gTIreNl~~~~~~----------~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 983 (1082)
|+||++. .+..|+++|+.++... ..++.+.++++.+++.+.. ......||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLA-----------DRDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCHHHHHHHH
Confidence 9999996 4568999999774211 1122455566666654432 2344679999999999
Q ss_pred HHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHHhh
Q 001411 984 IARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 984 LARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eLl~ 1060 (1082)
||||++.+|+++||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999999875 3789999999999995 599999999999999999999875
No 337
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-41 Score=360.31 Aligned_cols=203 Identities=26% Similarity=0.482 Sum_probs=173.6
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
|+++|++|.|+++ ++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.++...+ ..+++.++|
T Consensus 1 i~~~~~~~~~~~~--~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGKK--RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECCE--EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 4789999999753 4999999999999 99999999999999999999999999999999999987666 667889999
Q ss_pred EccCCCcChh-cHHHHHhcCCC--CCC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhc
Q 001411 286 VSQEPALFAT-SIANNILLGKE--DAS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 358 (1082)
Q Consensus 286 v~Q~~~l~~~-ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal 358 (1082)
++|++.+|.. |++||+.+... ... .+++.++++..++.+..+ ....+||||||||++|||||
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-----------KKIGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-----------CchhhCCHHHHHHHHHHHHH
Confidence 9999999886 99999986421 111 233445555555443322 33458999999999999999
Q ss_pred ccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEec
Q 001411 359 LRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESG 423 (1082)
Q Consensus 359 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g 423 (1082)
+++|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999999999999876799999999999986 48999999999998764
No 338
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.8e-41 Score=356.24 Aligned_cols=199 Identities=38% Similarity=0.581 Sum_probs=179.7
Q ss_pred EEEEEEEEECCCCC---CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhh
Q 001411 206 IEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQ 282 (1082)
Q Consensus 206 i~~~~v~~~y~~~~---~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 282 (1082)
++++||+++|++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 47899999997542 2599999999999999999999999999999999999999999999998 5
Q ss_pred ceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCC
Q 001411 283 MGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 362 (1082)
Q Consensus 283 i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~ 362 (1082)
|+|++|+|++|+.|++||+.++... ..++..++++.+++.+++..+|.|++|.+++.+.+||||||||++||||++.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPF-DEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCc-CHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999987443 345667778888888999999999999999999999999999999999999999
Q ss_pred CeeEEeCcccCCCHHHHHHHHH-HHHHHc-CCCeEEEEccCccccccCCEEEEEeCCE
Q 001411 363 KILLLDEATSALDAESELIVQR-ALEKIM-SNRTTIVVAHRLSTVRDVDTIMVLKNGQ 418 (1082)
Q Consensus 363 ~illlDEpts~LD~~~~~~i~~-~l~~~~-~~~t~i~vtH~~~~~~~~d~i~~l~~G~ 418 (1082)
+++||||||++||+++.+.+.+ .+..+. +++|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888887 455553 4689999999999988899999999984
No 339
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3.1e-41 Score=377.09 Aligned_cols=212 Identities=22% Similarity=0.432 Sum_probs=183.7
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
++++|++++|+ +..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.+ +...+|++++
T Consensus 3 l~~~~l~~~~~---~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYG---TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEEC---CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 78999999996 3569999999999999999999999999999999999999999999999999877 4467889999
Q ss_pred EEcccCccccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~g-TIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||+|.+|++ |++||+.+... ..+ .+++.++++..++ +........+||||||||++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGL-----------RPEQHKKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCC-----------chHhcCchhhCCHHHHHHHHHHHH
Confidence 99999999976 99999975321 112 1233344444443 333444557899999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhh
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
|+++|++|||||||++||+.+.+.+++.|++..+++|+|++||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999998778999999999999876 999999999999999999999753
No 340
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-41 Score=362.08 Aligned_cols=209 Identities=34% Similarity=0.550 Sum_probs=182.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++||+++|+. .+ .|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .+++++
T Consensus 2 l~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---LP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVS 74 (232)
T ss_pred eEEEEEEEEECC---cc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEE
Confidence 789999999962 22 49999999999999999999999999999999999999999999999887654 357899
Q ss_pred EEcccCccccc-cHHHHhccCC-CC-----CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFST-TIYENIKYGN-ED-----ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~g-TIreNl~~~~-~~-----~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||++.+|.+ |+++|+.++. +. ..++++.++++..++.+++.+.| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999985 9999998642 11 12345777888888776665544 4799999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhh
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999998753 7899999999999865 999999999999999999999863
No 341
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-41 Score=368.54 Aligned_cols=225 Identities=32% Similarity=0.521 Sum_probs=185.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----ccEEEECCccCCC--CCH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPI-----SGTVLIDGYDIRT--LNL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--i~~ 906 (1082)
.++++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYG---DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEEC---CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 388999999996 347999999999999999999999999999999999999874 8999999999875 345
Q ss_pred HHHhcceEEEcccCccccc-cHHHHhccCCC--CC-CHHHHHH----HHHHhcHHHHHhhCcccccccccCCCCCCChhH
Q 001411 907 RSLRRKIGLVQQEPALFST-TIYENIKYGNE--DA-SEIELMK----ATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQ 978 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~g-TIreNl~~~~~--~~-~d~ei~~----al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQ 978 (1082)
..+|++++|+||+|.+|+. |+++|+.++.. .. .+++..+ .++..++++.+ ++.++. ...+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLKT----PATGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhcC----CcccCCHHH
Confidence 5788999999999999984 99999975421 11 2333222 23333333222 223343 346799999
Q ss_pred HHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHH
Q 001411 979 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQ 1057 (1082)
Q Consensus 979 rQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~e 1057 (1082)
|||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667999999999999976 99999999999999999999
Q ss_pred HhhhccchHHH
Q 001411 1058 LLRKENGIYKQ 1068 (1082)
Q Consensus 1058 Ll~~~~g~f~~ 1068 (1082)
++..+...+..
T Consensus 234 ~~~~~~~~~~~ 244 (252)
T PRK14272 234 LFTNPRDERTE 244 (252)
T ss_pred HHhCcCcHHHH
Confidence 98755444433
No 342
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-41 Score=368.63 Aligned_cols=221 Identities=33% Similarity=0.507 Sum_probs=188.3
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCccCCC--CC
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRT--LN 905 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~ 905 (1082)
..|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~---~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 19 SVFEVEGVKVFYG---GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred ceEEEeeEEEEeC---CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 3699999999996 34699999999999999999999999999999999999864 58999999999864 34
Q ss_pred HHHHhcceEEEcccCccccccHHHHhccCCCC-----CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHH
Q 001411 906 LRSLRRKIGLVQQEPALFSTTIYENIKYGNED-----ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 906 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~-----~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 980 (1082)
...+|++|+|+||++.+|+.|+.+|+.++... ..++++.++++.+++.+.+.. ........|||||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD-------KLKEKGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH-------HhcCCcccCCHHHHH
Confidence 45678999999999999999999999874211 123445566777776544432 233455679999999
Q ss_pred HHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEe---------CCEEE
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQ---------QGKVA 1050 (1082)
Q Consensus 981 rlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~---------~G~iv 1050 (1082)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||++++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999999999999998778899999999999965 99999997 89999
Q ss_pred EecChHHHhhhcc
Q 001411 1051 EIGSHEQLLRKEN 1063 (1082)
Q Consensus 1051 e~G~~~eLl~~~~ 1063 (1082)
+.|+++++...+.
T Consensus 249 ~~g~~~~~~~~~~ 261 (274)
T PRK14265 249 EFSPTEQMFGSPQ 261 (274)
T ss_pred EeCCHHHHHhCCC
Confidence 9999999986443
No 343
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-41 Score=368.58 Aligned_cols=220 Identities=25% Similarity=0.455 Sum_probs=183.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHH-hcc
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSL-RRK 912 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l-R~~ 912 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |..
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 489999999996 3579999999999999999999999999999999999999999999999999988876654 456
Q ss_pred eEEEcccCccccc-cHHHHhccCCCCCC--------------HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChh
Q 001411 913 IGLVQQEPALFST-TIYENIKYGNEDAS--------------EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGG 977 (1082)
Q Consensus 913 i~~VpQdp~Lf~g-TIreNl~~~~~~~~--------------d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgG 977 (1082)
++|+||+|.+|++ |+++|+.++..... +.+..+. ...+.++++.+ |++........+||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~--gl~~~~~~~~~~LS~G 157 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEA--LDRAATWLERV--GLLEHANRQAGNLAYG 157 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHH--HHHHHHHHHhC--ChhhhhhCChhhCCHH
Confidence 9999999999986 99999987421100 0000000 11122333333 4544555666789999
Q ss_pred HHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecC
Q 001411 978 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGS 1054 (1082)
Q Consensus 978 QrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~ 1054 (1082)
||||++||||++.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+
T Consensus 158 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~ 237 (255)
T PRK11300 158 QQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGT 237 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999999999999999999998743 7899999999999866 99999999999999999
Q ss_pred hHHHhh
Q 001411 1055 HEQLLR 1060 (1082)
Q Consensus 1055 ~~eLl~ 1060 (1082)
++++..
T Consensus 238 ~~~~~~ 243 (255)
T PRK11300 238 PEEIRN 243 (255)
T ss_pred HHHHhh
Confidence 999875
No 344
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.9e-41 Score=361.08 Aligned_cols=204 Identities=30% Similarity=0.477 Sum_probs=173.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHH---Hhc
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS---LRR 911 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR~ 911 (1082)
|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++... +|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999952 346999999999999999999999999999999999999999999999999998776543 688
Q ss_pred ceEEEcccCccc-cccHHHHhccCC--CCCCHH----HHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHH
Q 001411 912 KIGLVQQEPALF-STTIYENIKYGN--EDASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 912 ~i~~VpQdp~Lf-~gTIreNl~~~~--~~~~d~----ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaL 984 (1082)
+++|+||+|.+| ..|+++|+.++. ...+++ ++.++++..++.+... ....+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAK-----------NFPIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CCchhCCHHHHHHHHH
Confidence 999999999874 679999998642 122322 3445555555544433 2346799999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEE
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAE 1051 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive 1051 (1082)
|||++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999999874 47899999999999976 89999999999863
No 345
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-41 Score=364.65 Aligned_cols=209 Identities=29% Similarity=0.515 Sum_probs=176.6
Q ss_pred cEEEEEEEEECCCCC--CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHH---H
Q 001411 205 QIEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW---L 279 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~--~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~ 279 (1082)
.++++|++|+|++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997432 35999999999999999999999999999999999999999999999999998776543 3
Q ss_pred h-hhceEEccCCCcChh-cHHHHHhcCCC--CCCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHH
Q 001411 280 R-EQMGLVSQEPALFAT-SIANNILLGKE--DASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 351 (1082)
Q Consensus 280 ~-~~i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqr 351 (1082)
+ +.++|++|++.+|+. |++||+.++.. .... +++.++++.. |++........+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAV-----------GLEHRANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCchhhhCChhhCCHHHHHH
Confidence 3 579999999998876 99999987421 1111 1223333333 44444555667899999999
Q ss_pred HHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccccCCEEEEEeCCEEEEecC
Q 001411 352 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGT 424 (1082)
Q Consensus 352 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~ 424 (1082)
++||||++.+|+++||||||++||+.+...+.+.|.++. +++|+|++||+++.+..+|++++|++|++++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999874 4789999999999998889999999999998775
No 346
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-41 Score=361.46 Aligned_cols=209 Identities=26% Similarity=0.457 Sum_probs=175.9
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
|+++|++++|++. ++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+++.++|
T Consensus 1 i~~~~~~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGDF--EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECCE--EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEEE
Confidence 4789999999753 499999999999999999999999999999999999999999999999988653 3566778999
Q ss_pred EccCCCcChh-cHHHHHhcCCCC--CC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhc
Q 001411 286 VSQEPALFAT-SIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 358 (1082)
Q Consensus 286 v~Q~~~l~~~-ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal 358 (1082)
++|++.+++. |++||+.++... .. .+++.+.++..++.+.. .....+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAA-----------DRLVKTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCChhhCCHHHHHHHHHHHHH
Confidence 9999998876 999999864211 11 22344455555544333 233458999999999999999
Q ss_pred ccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhh
Q 001411 359 LRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 428 (1082)
Q Consensus 359 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 428 (1082)
+.+|+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999988753 6899999999998865 899999999999999887654
No 347
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=6.3e-41 Score=368.93 Aligned_cols=229 Identities=27% Similarity=0.456 Sum_probs=189.4
Q ss_pred cEEEEeEEEECCCC------CCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHH
Q 001411 834 NIELRNVSFKYPVR------PDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR 907 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~------~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~ 907 (1082)
.|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 124799999999999999999999999999999999999999999999999999766666
Q ss_pred HHhcceEEEcccCc--ccc-ccHHHHhccCC---CCC----CHHHHHHHHHHhcHH-HHHhhCcccccccccCCCCCCCh
Q 001411 908 SLRRKIGLVQQEPA--LFS-TTIYENIKYGN---EDA----SEIELMKATKAANAH-GFISRMPEGYQSHVGDRGVQLSG 976 (1082)
Q Consensus 908 ~lR~~i~~VpQdp~--Lf~-gTIreNl~~~~---~~~----~d~ei~~al~~a~l~-~~i~~lp~gldt~v~e~G~~LSg 976 (1082)
..|++++|+||+|. +++ -|+.+|+.+.. ... .++++.++++.+++. +.. +. ...+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHA-------SY----YPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHH-------hc----CchhcCH
Confidence 66788999999985 444 38888886421 111 124466677777663 222 22 2357999
Q ss_pred hHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 001411 977 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 977 GQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1053 (1082)
|||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999875 37899999999999976 9999999999999999
Q ss_pred ChHHHhhhc-cchHHHHHHHh
Q 001411 1054 SHEQLLRKE-NGIYKQLIRLQ 1073 (1082)
Q Consensus 1054 ~~~eLl~~~-~g~f~~l~~~~ 1073 (1082)
+++++.+.+ ...+++++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~ 253 (267)
T PRK15112 233 STADVLASPLHELTKRLIAGH 253 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHhc
Confidence 999998643 34566777643
No 348
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-41 Score=357.79 Aligned_cols=201 Identities=33% Similarity=0.540 Sum_probs=174.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+. .. .|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 579999999962 22 39999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEcccCccccc-cHHHHhccCCC-C-----CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFST-TIYENIKYGNE-D-----ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~g-TIreNl~~~~~-~-----~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||+|.+|++ |+++|+.++.. . .+++++.++++..++.+...+.| .+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 99999986432 1 12445677788877766554433 4799999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1053 (1082)
++++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999875 37899999999999966 9999999999998865
No 349
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-41 Score=370.67 Aligned_cols=216 Identities=29% Similarity=0.563 Sum_probs=183.5
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++|++++|++...++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+|+.++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 58999999999743345999999999999999999999999999999999999999999999999998777778888999
Q ss_pred EEccCCC--cChhcHHHHHhcCCCC--CCHHH----HHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 285 LVSQEPA--LFATSIANNILLGKED--ASMDR----VIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 285 ~v~Q~~~--l~~~ti~~ni~~g~~~--~~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
|++|+|. ++..|++||+.++... .+.++ +.+.++..++.+ .......+||||||||++|||
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~lar 155 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMED-----------YLDKEPQNLSGGQKQRVAIAS 155 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHH-----------HhhCCcccCCHHHHHHHHHHH
Confidence 9999983 4567999999875321 12222 333344444433 334455689999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhc
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
||+.+|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 156 al~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 156 VLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998753 4899999999998888999999999999999998887653
No 350
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=5.1e-41 Score=361.92 Aligned_cols=208 Identities=29% Similarity=0.428 Sum_probs=177.2
Q ss_pred cEEEEeEEEECCCCCC-cccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHH---H
Q 001411 834 NIELRNVSFKYPVRPD-ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS---L 909 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~-~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---l 909 (1082)
.|+++||+++|+.... .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+... +
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999973211 36999999999999999999999999999999999999999999999999998877653 3
Q ss_pred -hcceEEEcccCccccc-cHHHHhccCC--CCCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHH
Q 001411 910 -RRKIGLVQQEPALFST-TIYENIKYGN--EDAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 981 (1082)
Q Consensus 910 -R~~i~~VpQdp~Lf~g-TIreNl~~~~--~~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 981 (1082)
+++++|+||+|.+|+. |+++|+.++. ...+ .+++.++++..++.++..+. ...||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHL-----------PAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHH
Confidence 3689999999999875 9999997531 1111 23456666676665554433 35799999999
Q ss_pred HHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-C-CceEEEEecCchhhhccCEEEEEeCCEEEEe
Q 001411 982 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-E-GRTTIMVAHRLSTIRNADKIAVLQQGKVAEI 1052 (1082)
Q Consensus 982 laLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~-~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~ 1052 (1082)
++|||||+++|++|||||||++||+.+.+.+.+.|++.. + ++|||+|||+++.+..||++++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999999999874 3 7899999999999988999999999999874
No 351
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.3e-41 Score=380.06 Aligned_cols=213 Identities=30% Similarity=0.499 Sum_probs=181.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+ +..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.+.+ ..+|++|
T Consensus 41 ~i~i~nl~k~y~---~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYG---DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 499999999996 346999999999999999999999999999999999999999999999999997654 5688999
Q ss_pred EEEcccCccc-cccHHHHhccCCC--CCCHHHH----HHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 914 GLVQQEPALF-STTIYENIKYGNE--DASEIEL----MKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 914 ~~VpQdp~Lf-~gTIreNl~~~~~--~~~d~ei----~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
+|+||++.+| ..|++||+.+... ..+..+. .++++..+ +++..++.+ .+||||||||++|||
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~-------L~~~~~~~~----~~LS~G~kqrv~lA~ 185 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFAR-------LESKADARV----SDLSGGMKRRLTLAR 185 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-------CchhhCCCh----hhCCHHHHHHHHHHH
Confidence 9999999987 5699999975321 1222222 22233332 333445554 469999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhh
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
||+.+|++|||||||++||+.+.+.+++.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999875 48999999999999965 999999999999999999999763
No 352
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-41 Score=367.61 Aligned_cols=222 Identities=32% Similarity=0.519 Sum_probs=185.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CccEEEECCccCCC--CCH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD--P---ISGTVLIDGYDIRT--LNL 906 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--i~~ 906 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYG---KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEEC---CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 489999999996 3469999999999999999999999999999999999975 4 58999999999864 345
Q ss_pred HHHhcceEEEcccCccccccHHHHhccCCC--CC-C----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 907 RSLRRKIGLVQQEPALFSTTIYENIKYGNE--DA-S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~--~~-~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
..+|++++|+||+|.+|+.|+++|+.++.. .. . ++++.++++.+++.+.+ .........+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEV-------KDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccch-------hhHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 11 1 23344555555543322 2223445568999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.+.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667899999999999865 999999999999999999999
Q ss_pred hhhccch
Q 001411 1059 LRKENGI 1065 (1082)
Q Consensus 1059 l~~~~g~ 1065 (1082)
...+...
T Consensus 235 ~~~~~~~ 241 (252)
T PRK14255 235 FLNPKEK 241 (252)
T ss_pred hcCCCCh
Confidence 8654433
No 353
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-41 Score=367.07 Aligned_cols=227 Identities=27% Similarity=0.474 Sum_probs=189.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEC------CccCCCCCHH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLID------GYDIRTLNLR 907 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~id------G~di~~i~~~ 907 (1082)
.|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++ |.++.+++..
T Consensus 10 ~i~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYIN---DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecC---CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 599999999996 3469999999999999999999999999999999999999998666555 5777777778
Q ss_pred HHhcceEEEcccCccccc-cHHHHhccCCC--CC-CHHH----HHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHH
Q 001411 908 SLRRKIGLVQQEPALFST-TIYENIKYGNE--DA-SEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 979 (1082)
Q Consensus 908 ~lR~~i~~VpQdp~Lf~g-TIreNl~~~~~--~~-~d~e----i~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQr 979 (1082)
.+|++++|+||+|.+|.+ |+++|+.++.. .. .+++ +.++++..++.+++. ......+..||+|||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVY-------DRLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccch-------hhhcCCcccCCHHHH
Confidence 889999999999999976 99999986421 11 2222 344555555543221 123345567999999
Q ss_pred HHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHH
Q 001411 980 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQL 1058 (1082)
Q Consensus 980 QrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eL 1058 (1082)
||++||||++++|++|||||||++||..+.+.+.+.|++..+++|+|+|||+++.+. .||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999998877799999999999995 5999999999999999999999
Q ss_pred hhhccchHHHHH
Q 001411 1059 LRKENGIYKQLI 1070 (1082)
Q Consensus 1059 l~~~~g~f~~l~ 1070 (1082)
.+.+...|.+.+
T Consensus 240 ~~~~~~~~~~~~ 251 (257)
T PRK14246 240 FTSPKNELTEKY 251 (257)
T ss_pred HhCCCcHHHHHH
Confidence 875555565544
No 354
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-41 Score=367.04 Aligned_cols=218 Identities=33% Similarity=0.553 Sum_probs=181.8
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|++++|++. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4689999999752 349999999999999999999999999999999999999999999999999988777777889999
Q ss_pred EccCCCcCh-hcHHHHHhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccc--cccCCCCCCChHHHHHHHHHHhccc
Q 001411 286 VSQEPALFA-TSIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQT--QVGEGGTQLSGGQKQRIAIARAVLR 360 (1082)
Q Consensus 286 v~Q~~~l~~-~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t--~~g~~g~~LSgGqkqri~lARal~~ 360 (1082)
++|++.+|+ .|++||+.++... ...++.. ..+.+.++.+ |+.. .....+.+||||||||++|||||+.
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~~ 152 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKIR-----ERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALAA 152 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHhc
Confidence 999999986 5999999875321 1111111 1112233333 3332 4456678999999999999999999
Q ss_pred CCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 361 NPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 361 ~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
+|+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 153 ~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 153 DPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999998753 789999999999875 5899999999999999998887543
No 355
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-41 Score=370.72 Aligned_cols=219 Identities=31% Similarity=0.496 Sum_probs=184.6
Q ss_pred CCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCC--CC
Q 001411 203 AGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKS--LQ 275 (1082)
Q Consensus 203 ~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~ 275 (1082)
.+.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 17 ~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~ 94 (267)
T PRK14235 17 EIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLD 94 (267)
T ss_pred CceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccc
Confidence 357999999999974 3499999999999999999999999999999999999975 89999999999864 34
Q ss_pred HHHHhhhceEEccCCCcChhcHHHHHhcCCCC--C--C----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChH
Q 001411 276 LKWLREQMGLVSQEPALFATSIANNILLGKED--A--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGG 347 (1082)
Q Consensus 276 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~--~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgG 347 (1082)
...+|+.++|++|++.+|+.|+.||+.++... . . .+++.++++..++.+.+ ....+..+.+||||
T Consensus 95 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG 167 (267)
T PRK14235 95 VVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEV-------KDRLHEPGTGLSGG 167 (267)
T ss_pred hHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCHH
Confidence 56678899999999999988999999875310 0 1 12334444444442221 12345567789999
Q ss_pred HHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCch
Q 001411 348 QKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHV 426 (1082)
Q Consensus 348 qkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~ 426 (1082)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 168 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 247 (267)
T PRK14235 168 QQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTE 247 (267)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988767899999999999854 8999999999999999998
Q ss_pred hhhh
Q 001411 427 DLIS 430 (1082)
Q Consensus 427 ~l~~ 430 (1082)
++..
T Consensus 248 ~~~~ 251 (267)
T PRK14235 248 KMFT 251 (267)
T ss_pred HHHh
Confidence 8764
No 356
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-41 Score=372.50 Aligned_cols=215 Identities=29% Similarity=0.504 Sum_probs=183.0
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCC--CCCHHHHhhh
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLK--SLQLKWLREQ 282 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~--~~~~~~~~~~ 282 (1082)
.|+++|++|+|++. ..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. ..+...+++.
T Consensus 5 ~l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSDG-THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 48999999999632 34999999999999999999999999999999999999999999999999984 3345677889
Q ss_pred ceEEccCC--CcChhcHHHHHhcCCCC--CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 001411 283 MGLVSQEP--ALFATSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 354 (1082)
Q Consensus 283 i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~l 354 (1082)
++|++|++ .+++.|++||+.++... .+. +++.++++..++ .........+||||||||++|
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL-----------~~~~~~~~~~LS~G~~qrl~l 152 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGI-----------EHLKDKPTHCLSFGQKKRVAI 152 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCC-----------hhhhhCCcccCCHHHHHHHHH
Confidence 99999998 57888999999875321 122 233344444443 333445667999999999999
Q ss_pred HHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 355 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 355 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
||||+.+|++|||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+. .||++++|++|++++.|+++++.+.
T Consensus 153 araL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 153 AGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999998753 789999999999986 5999999999999999999988764
No 357
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-41 Score=383.33 Aligned_cols=213 Identities=29% Similarity=0.484 Sum_probs=181.7
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhc
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 283 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 283 (1082)
..++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|+++.+.++ .++.|
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 35999999999974 349999999999999999999999999999999999999999999999999877654 46789
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCC--CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 284 GLVSQEPALFAT-SIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
|||+|++.+|+. |+.|||.|+... .+. +++.+.++..++.+ .......+|||||||||+|||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~-----------~~~~~~~~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQE-----------FAKRKPHQLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHHHHHHHHHHH
Confidence 999999999987 999999987431 122 23334444444433 334445689999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
||+.+|++||||||||+||+.++..+.+.|+++. .+.|+|+|||+++++. .||+|++|++|++++.|+++++..+
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999998887764 3689999999999865 5999999999999999999998765
No 358
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.8e-41 Score=347.87 Aligned_cols=178 Identities=35% Similarity=0.658 Sum_probs=164.6
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
|+++|++++|++...++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+++.++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 478999999976433599999999999999999999999999999999999999999999999988665 5667888999
Q ss_pred EccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCee
Q 001411 286 VSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL 365 (1082)
Q Consensus 286 v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~il 365 (1082)
++|++++|+.|++||+ ...||||||||++||||++.+|+++
T Consensus 80 ~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~l 120 (178)
T cd03247 80 LNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPIV 120 (178)
T ss_pred EccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999998 3579999999999999999999999
Q ss_pred EEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccccCCEEEEEeCCEEEEec
Q 001411 366 LLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESG 423 (1082)
Q Consensus 366 llDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g 423 (1082)
||||||++||+.+.+.+.+.|.++.+++|+|++||+++.++.||++++|++|++++.|
T Consensus 121 llDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 121 LLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999887788999999999999889999999999998754
No 359
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-41 Score=379.07 Aligned_cols=229 Identities=22% Similarity=0.359 Sum_probs=187.8
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc----CCccEEEECCccCCCCCHHH
Q 001411 834 NIELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD----PISGTVLIDGYDIRTLNLRS 908 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~----p~~G~I~idG~di~~i~~~~ 908 (1082)
-|+++|++++|+.+. ...+|+||||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||+++.+++.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 389999999996321 2469999999999999999999999999999999999986 58999999999999888766
Q ss_pred Hh----cceEEEcccCc--ccc-ccHHHHhccCC------C----C--CCHHHHHHHHHHhcHHHHHhhCcccccccccC
Q 001411 909 LR----RKIGLVQQEPA--LFS-TTIYENIKYGN------E----D--ASEIELMKATKAANAHGFISRMPEGYQSHVGD 969 (1082)
Q Consensus 909 lR----~~i~~VpQdp~--Lf~-gTIreNl~~~~------~----~--~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e 969 (1082)
++ ++|+||||+|. +++ .||.+|+.... . . ...+++.++++.+++.+.-. ....
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~--------~~~~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKD--------AMRS 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHH--------HHhC
Confidence 53 47999999997 333 58988885310 0 0 01234566677776643210 1123
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeC
Q 001411 970 RGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQ 1046 (1082)
Q Consensus 970 ~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~ 1046 (1082)
....||||||||++|||||+.+|+||||||||++||+.+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 3467999999999999999999999999999999999999999999998753 7899999999999965 999999999
Q ss_pred CEEEEecChHHHhhhccchHHHHH
Q 001411 1047 GKVAEIGSHEQLLRKENGIYKQLI 1070 (1082)
Q Consensus 1047 G~ive~G~~~eLl~~~~g~f~~l~ 1070 (1082)
|+|+|.|+++++++++...|.+.+
T Consensus 235 G~ive~g~~~~i~~~p~~~y~~~l 258 (330)
T PRK15093 235 GQTVETAPSKELVTTPHHPYTQAL 258 (330)
T ss_pred CEEEEECCHHHHHhCCCCHHHHHH
Confidence 999999999999876666776533
No 360
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-41 Score=358.60 Aligned_cols=201 Identities=25% Similarity=0.517 Sum_probs=170.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+|++++
T Consensus 1 l~~~~l~~~~~---~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFG---RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 47899999996 3469999999999999999999999999999999999999999999999998753 5678999
Q ss_pred EEcccCccccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~g-TIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||++.+|++ |+++|+.++.. ..+ ++++.++++..++. ........+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrl~la~a 142 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELS-----------EYANKRVEELSKGNQQKVQFIAA 142 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCCh-----------HHHhCcHhhCCHHHHHHHHHHHH
Confidence 99999999875 99999976321 111 22333444444443 33334456799999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1053 (1082)
++++|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 143 l~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 143 VIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999999999999999865 47899999999999865 9999999999998865
No 361
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=4.6e-41 Score=359.79 Aligned_cols=206 Identities=26% Similarity=0.444 Sum_probs=173.9
Q ss_pred EEEEEEEEECCCCCC--ccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhc
Q 001411 206 IEFSEVCFAYPSRPH--MVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 283 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~--~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 283 (1082)
++++|++++|++... ++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. ...++++.+
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999975421 59999999999999999999999999999999999999999999999999875 345678899
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCC--CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 284 GLVSQEPALFAT-SIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
+|++|++.+|+. |++||+.+.... ... +++.++++.. |++........+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRL-----------GMEELLDRRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CCHHHHhhhhhhcCHHHHHHHHHHH
Confidence 999999999986 999999764221 111 2233333333 4444455566789999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEec
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 423 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g 423 (1082)
|++.+|+++||||||++||+.+.+.+.+.|.++. +++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999875 47899999999998764 8999999999998754
No 362
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-41 Score=371.09 Aligned_cols=216 Identities=31% Similarity=0.562 Sum_probs=185.6
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCC---cEEEECCeeCCCCCHHHHhh
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTS---GKILLDGHDLKSLQLKWLRE 281 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~---G~i~~~g~~~~~~~~~~~~~ 281 (1082)
.++++|++|+|++...++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...+...+++
T Consensus 5 ~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~ 84 (282)
T PRK13640 5 IVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIRE 84 (282)
T ss_pred eEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHh
Confidence 589999999997533459999999999999999999999999999999999999998 89999999998777777788
Q ss_pred hceEEccCCC--cChhcHHHHHhcCCCC--CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 001411 282 QMGLVSQEPA--LFATSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 282 ~i~~v~Q~~~--l~~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~ 353 (1082)
+++|++|+|. +++.|+.|||.++... .+. +++.++++..++.+... ....+||||||||++
T Consensus 85 ~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LS~G~~qrv~ 153 (282)
T PRK13640 85 KVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYID-----------SEPANLSGGQKQRVA 153 (282)
T ss_pred heEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhc-----------CCcccCCHHHHHHHH
Confidence 9999999984 5677999999876332 122 23445555555544443 344689999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhc
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|||||+.+|+++||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 154 laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 154 IAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999998753 7899999999999888999999999999999999887653
No 363
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.8e-41 Score=357.52 Aligned_cols=203 Identities=25% Similarity=0.466 Sum_probs=174.3
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ..+++.++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 478999999974 3599999999999999999999999999999999999999999999999988654 456778999
Q ss_pred EccCCCcCh-hcHHHHHhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCC
Q 001411 286 VSQEPALFA-TSIANNILLGKE--DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 362 (1082)
Q Consensus 286 v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~ 362 (1082)
++|++.+++ .|++||+.++.. ..+.+++.++++..++.+.. ......||||||||++||||++.+|
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al~~~p 145 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSA-----------KKKVKGFSLGMKQRLGIALALLGNP 145 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHH-----------hhhHhhCCHHHHHHHHHHHHHhcCC
Confidence 999998885 599999987532 12345566666666554443 3344689999999999999999999
Q ss_pred CeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEec
Q 001411 363 KILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 423 (1082)
Q Consensus 363 ~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g 423 (1082)
+++||||||++||+.+.+.+.+.|.++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 146 DLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999998875 47899999999998864 8999999999998764
No 364
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=4.8e-41 Score=345.25 Aligned_cols=172 Identities=44% Similarity=0.741 Sum_probs=162.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+.. ..++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 5789999999732 246999999999999999999999999999999999999999999999999999999889999999
Q ss_pred EEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 001411 915 LVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSI 994 (1082)
Q Consensus 915 ~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~I 994 (1082)
|++|+|.+|++|+++|+ ||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhccCEEEEEeCCEE
Q 001411 995 LLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRNADKIAVLQQGKV 1049 (1082)
Q Consensus 995 LlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~i 1049 (1082)
|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999999875 47899999999999988999999999974
No 365
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.8e-40 Score=364.14 Aligned_cols=227 Identities=27% Similarity=0.438 Sum_probs=185.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcc-----CCCCCHHH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYD-----IRTLNLRS 908 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~d-----i~~i~~~~ 908 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYG---PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcC---CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 489999999996 3469999999999999999999999999999999999999999999999998 87776554
Q ss_pred ----HhcceEEEcccCc--cc-cccHHHHhccCC---CCCCHHHHHHHHHHhcHHHHHhhCccccc-ccccCCCCCCChh
Q 001411 909 ----LRRKIGLVQQEPA--LF-STTIYENIKYGN---EDASEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQLSGG 977 (1082)
Q Consensus 909 ----lR~~i~~VpQdp~--Lf-~gTIreNl~~~~---~~~~d~ei~~al~~a~l~~~i~~lp~gld-t~v~e~G~~LSgG 977 (1082)
+|+.++|+||++. ++ ..|+.+|+.+.. ......++.+ .+.++++.+ |++ +.....+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3667999999984 33 348888875421 1111112211 234455554 333 3455667889999
Q ss_pred HHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecC
Q 001411 978 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGS 1054 (1082)
Q Consensus 978 QrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~ 1054 (1082)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998653 7899999999999975 99999999999999999
Q ss_pred hHHHhhhccchHHHHH
Q 001411 1055 HEQLLRKENGIYKQLI 1070 (1082)
Q Consensus 1055 ~~eLl~~~~g~f~~l~ 1070 (1082)
++++..++...|.+.+
T Consensus 236 ~~~~~~~~~~~~~~~~ 251 (258)
T PRK11701 236 TDQVLDDPQHPYTQLL 251 (258)
T ss_pred HHHHhcCCCCHHHHHH
Confidence 9999865544565443
No 366
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1e-40 Score=366.94 Aligned_cols=229 Identities=25% Similarity=0.406 Sum_probs=189.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC---ccEEEECCccCCCC-----C
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPI---SGTVLIDGYDIRTL-----N 905 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~---~G~I~idG~di~~i-----~ 905 (1082)
.|+++||+++|+ +.++|+|+||+|++||+++|+|+||||||||+++|.|+++|+ +|+|.+||.++... +
T Consensus 4 ~l~~~nl~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFN---QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeC---CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 489999999996 346999999999999999999999999999999999999986 49999999998654 2
Q ss_pred HHHHhcceEEEcccCcccc-ccHHHHhccCCCC--------------CCHHHHHHHHHHhcHHHHHhhCcccccccccCC
Q 001411 906 LRSLRRKIGLVQQEPALFS-TTIYENIKYGNED--------------ASEIELMKATKAANAHGFISRMPEGYQSHVGDR 970 (1082)
Q Consensus 906 ~~~lR~~i~~VpQdp~Lf~-gTIreNl~~~~~~--------------~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~ 970 (1082)
...+|++++|+||++.+|. .|+++|+.++... ...+++.++++..++.+.. ...
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFA-----------HQR 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHH-----------hCC
Confidence 4567889999999999887 5999999864211 0122345555555554433 334
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhh-ccCEEEEEeCC
Q 001411 971 GVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIR-NADKIAVLQQG 1047 (1082)
Q Consensus 971 G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~Vl~~G 1047 (1082)
...||||||||++||||++.+|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+. .||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46799999999999999999999999999999999999999999999875 3789999999999875 59999999999
Q ss_pred EEEEecChHHHhhhccchHHHHHHHhhccCCc
Q 001411 1048 KVAEIGSHEQLLRKENGIYKQLIRLQQDKNPE 1079 (1082)
Q Consensus 1048 ~ive~G~~~eLl~~~~g~f~~l~~~~~~~~~~ 1079 (1082)
++++.|+++++ . +....+++.......++
T Consensus 230 ~i~~~g~~~~~-~--~~~~~~~~~~~~~~~~~ 258 (262)
T PRK09984 230 HVFYDGSSQQF-D--NERFDHLYRSINRVEEN 258 (262)
T ss_pred EEEEeCCHHHh-c--cHHHHHHHhhhhccccc
Confidence 99999999997 2 24567777665544443
No 367
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=4.5e-41 Score=364.00 Aligned_cols=216 Identities=29% Similarity=0.519 Sum_probs=181.8
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... ++.++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEE
Confidence 689999999974 34999999999999999999999999999999999999999999999999987665544 458999
Q ss_pred EccCCCcC-hhcHHHHHhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCC
Q 001411 286 VSQEPALF-ATSIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 362 (1082)
Q Consensus 286 v~Q~~~l~-~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~ 362 (1082)
++|++.++ ..|++||+.++... ...++..+ .+.+.++.+ |++........+||||||||++|||||+.+|
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~p 151 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHRP 151 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999874 56999999875321 11111111 112333333 5555566777899999999999999999999
Q ss_pred CeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhc
Q 001411 363 KILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 363 ~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
+++||||||++||+.+.+.+.+.|.++. +++|+|++||+++.+..||++++|++|++++.|+++++.+.
T Consensus 152 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 152 ALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 9999999999999999999999999875 37899999999999888999999999999999998888764
No 368
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.4e-41 Score=376.60 Aligned_cols=214 Identities=29% Similarity=0.494 Sum_probs=179.7
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhc
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 283 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 283 (1082)
..++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...|++|
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 35999999999974 34999999999999999999999999999999999999999999999999987644 4578899
Q ss_pred eEEccCCCcCh-hcHHHHHhcCCCC--CCHHH----HHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 284 GLVSQEPALFA-TSIANNILLGKED--ASMDR----VIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 284 ~~v~Q~~~l~~-~ti~~ni~~g~~~--~~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
|||||++.++. .|++||+.+.... .+..+ +.++++.. .+++..++. ..+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-------~l~~~~~~~----~~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFA-------KLENKADAK----VGELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-------CCchHhcCc----hhhCCHHHHHHHHHHH
Confidence 99999999886 4999999853221 12222 22222222 233333333 3579999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhc
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
||+.+|++++|||||++||+.+.+.+++.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999885 47899999999999865 999999999999999999988654
No 369
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.3e-41 Score=364.53 Aligned_cols=216 Identities=29% Similarity=0.473 Sum_probs=181.2
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHH-hhhce
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL-REQMG 284 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~i~ 284 (1082)
++++|++++|+++ .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ ++.++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGKR--KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCCE--EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 4789999999743 49999999999999999999999999999999999999999999999999877665543 56799
Q ss_pred EEccCCCcChh-cHHHHHhcCCCCC--CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccC
Q 001411 285 LVSQEPALFAT-SIANNILLGKEDA--SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRN 361 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~ 361 (1082)
|++|++.+|+. |++||+.++.+.. ..++..+ .+.+.++.+ |++........+||||||||++||||++.+
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 151 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKEREE-----KLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALATN 151 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999987 9999998753211 1111111 122334443 555556667789999999999999999999
Q ss_pred CCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhh
Q 001411 362 PKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 362 ~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 152 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 152 PKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 99999999999999999999999998875 4789999999998765 489999999999999999887754
No 370
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-41 Score=381.30 Aligned_cols=212 Identities=31% Similarity=0.496 Sum_probs=184.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCC----CHHHHh
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL----NLRSLR 910 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~~lR 910 (1082)
|++ |++++|+. . .+ |+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +....|
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 677 99999962 2 23 99999999999999999999999999999999999999999999998653 244568
Q ss_pred cceEEEcccCcccc-ccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHc
Q 001411 911 RKIGLVQQEPALFS-TTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAIL 989 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~-gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL 989 (1082)
++++||||++.+|+ .|+++|+.++.....++++.++++..++.++..+ ...+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDR-----------YPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhC-----------CcccCCHHHHHHHHHHHHHH
Confidence 89999999999996 5999999986544445667777777776555443 33679999999999999999
Q ss_pred cCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhcc
Q 001411 990 KNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKEN 1063 (1082)
Q Consensus 990 ~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~~ 1063 (1082)
++|++||||||||+||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++.
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~ 221 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSA 221 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcc
Confidence 99999999999999999999999999998753 6899999999998865 99999999999999999999987654
No 371
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=8.7e-41 Score=360.50 Aligned_cols=212 Identities=35% Similarity=0.556 Sum_probs=173.2
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCH---HHHh
Q 001411 835 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL---RSLR 910 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR 910 (1082)
|+++||+++|+.+. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996321 1269999999999999999999999999999999999999999999999999988774 5778
Q ss_pred cceEEEcccC--ccc-cccHHHHhccCC----CCCCHHHHHHHHHHhcHHHHHhhCccccc-ccccCCCCCCChhHHHHH
Q 001411 911 RKIGLVQQEP--ALF-STTIYENIKYGN----EDASEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 911 ~~i~~VpQdp--~Lf-~gTIreNl~~~~----~~~~d~ei~~al~~a~l~~~i~~lp~gld-t~v~e~G~~LSgGQrQrl 982 (1082)
++++|+||+| .++ ..|+++|+.++. +...+++...+. .+.++.+ |++ ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 9999999999 344 579999997531 111111111110 1222222 332 234455578999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh-ccCEEEEEeCCEEEEec
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G 1053 (1082)
+|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998754 789999999999997 49999999999998865
No 372
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-41 Score=368.56 Aligned_cols=213 Identities=30% Similarity=0.537 Sum_probs=181.2
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCC-HHHHhhhce
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ-LKWLREQMG 284 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~~~~i~ 284 (1082)
++++|++++|++. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 6899999999632 34999999999999999999999999999999999999999999999999987765 356788899
Q ss_pred EEccCCC--cChhcHHHHHhcCCCC--CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 285 LVSQEPA--LFATSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 285 ~v~Q~~~--l~~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
|++|+|. +++.|++|||.++... .+. +++.++++..+ ++.........||||||||++|||
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LS~G~~qrv~lar 149 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIG-----------LEKYRHRSPKTLSGGQGQCVALAG 149 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCC-----------CHHHhcCCcccCCHHHHHHHHHHH
Confidence 9999985 5677999999876421 122 22333333333 333344555789999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhh
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
||+.+|+++||||||++||+.+...+.+.++++. ++.|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 150 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 150 ILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 9999999999999999999999999999998875 4789999999999998899999999999999999888754
No 373
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-41 Score=369.56 Aligned_cols=216 Identities=30% Similarity=0.527 Sum_probs=185.1
Q ss_pred cEEEEEEEEECCCCC-CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhc
Q 001411 205 QIEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 283 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~-~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 283 (1082)
.++++|++++|++.. .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 489999999997432 3499999999999999999999999999999999999999999999999999877777788899
Q ss_pred eEEccCCC--cChhcHHHHHhcCCC--CCCHH----HHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 001411 284 GLVSQEPA--LFATSIANNILLGKE--DASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 355 (1082)
Q Consensus 284 ~~v~Q~~~--l~~~ti~~ni~~g~~--~~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lA 355 (1082)
+|++|+|. ++..|+.|||.++.. ....+ ++.++++..++.+... .....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKT-----------REPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHHHHH
Confidence 99999984 667799999987532 11222 3344555555544333 34468999999999999
Q ss_pred HhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhc
Q 001411 356 RAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 356 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|||+.+|+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998754 7899999999999888999999999999999999988754
No 374
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.8e-41 Score=338.97 Aligned_cols=221 Identities=27% Similarity=0.456 Sum_probs=190.2
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHH-hhhc
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL-REQM 283 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~i 283 (1082)
-++++|++..|+. ..+|++|||++++||+++|+|+||+|||||+++|+|+.+|.+|+|.++|+|++..++... |..|
T Consensus 3 mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 4789999999975 349999999999999999999999999999999999999999999999999999987664 6679
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCC
Q 001411 284 GLVSQEPALFAT-SIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 362 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~ 362 (1082)
+||||.-.+|+. ||+||+.+|......++. ....+++..+-+| -+......++.+|||||+|.+||||||..+|
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~----~~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~P 155 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEA----QERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSRP 155 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhccccccc----ccccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcCC
Confidence 999999999988 999999987433221111 1111223344455 4666778888999999999999999999999
Q ss_pred CeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccc-ccCCEEEEEeCCEEEEecCchhhhhcC
Q 001411 363 KILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTV-RDVDTIMVLKNGQVVESGTHVDLISKG 432 (1082)
Q Consensus 363 ~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~~ 432 (1082)
++|+|||||.+|-|.-.+.|.+.|+++++ +.||++|-++.... +.+||.+||++|+|+.+|+.+||.++.
T Consensus 156 klLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 156 KLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred CEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 99999999999999999999999999874 56999999999876 458999999999999999999998763
No 375
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-41 Score=367.39 Aligned_cols=218 Identities=30% Similarity=0.454 Sum_probs=182.6
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCC--CCCHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLK--SLQLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~--~~~~~ 277 (1082)
.++++|++++|++. ++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++. ..+..
T Consensus 4 ~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGSN--HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCCe--eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 48999999999753 499999999999999999999999999999999999987 4999999999986 44556
Q ss_pred HHhhhceEEccCCCcChh-cHHHHHhcCCCC----CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHH
Q 001411 278 WLREQMGLVSQEPALFAT-SIANNILLGKED----ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQ 348 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~-ti~~ni~~g~~~----~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGq 348 (1082)
.+++.++|++|++.+|+. |++||+.++... ... +++.++++..++.+. ..........+|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~G~ 154 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDE-------VKDRLNDYPSNLSGGQ 154 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccc-------hhhhhccChhhCCHHH
Confidence 678899999999999976 999999875311 011 223333333333211 1223455677899999
Q ss_pred HHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchh
Q 001411 349 KQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVD 427 (1082)
Q Consensus 349 kqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~ 427 (1082)
|||++|||||+++|+++||||||++||+.+.+.+.+.|.++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRK 234 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988767899999999998764 89999999999999999998
Q ss_pred hhhc
Q 001411 428 LISK 431 (1082)
Q Consensus 428 l~~~ 431 (1082)
+...
T Consensus 235 ~~~~ 238 (253)
T PRK14267 235 VFEN 238 (253)
T ss_pred HHhC
Confidence 8654
No 376
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.5e-41 Score=337.39 Aligned_cols=221 Identities=30% Similarity=0.470 Sum_probs=187.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHH-Hhcc
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS-LRRK 912 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~ 912 (1082)
-++++||+..|. ...+|++|||++++||+++++||||+||||++++++|+.+|.+|+|.++|.||+..+++. .|..
T Consensus 3 mL~v~~l~~~YG---~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYG---KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeeccc---ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 378999999996 357999999999999999999999999999999999999999999999999999998876 5888
Q ss_pred eEEEcccCcccc-ccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccC
Q 001411 913 IGLVQQEPALFS-TTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 991 (1082)
Q Consensus 913 i~~VpQdp~Lf~-gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~ 991 (1082)
|+||||...+|+ -||.|||..|.....+++-++ ..+.+.-+-+| -|.......+.+|||||+|-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~----~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQE----RDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhccccccccc----ccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 999999999996 599999997632222211111 01122222334 244455667788999999999999999999
Q ss_pred CCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhc
Q 001411 992 PSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKE 1062 (1082)
Q Consensus 992 ~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~ 1062 (1082)
|++|+|||||.+|-|.--+.|.++|++..+ +.||+.|-++.....+ +||.+||++|+|+..|+.+||.+++
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 999999999999999999999999999874 5699999999999865 9999999999999999999999753
No 377
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=6e-41 Score=359.70 Aligned_cols=208 Identities=30% Similarity=0.521 Sum_probs=170.9
Q ss_pred EEEEEEEEECCCCC--CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHH---Hh
Q 001411 206 IEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW---LR 280 (1082)
Q Consensus 206 i~~~~v~~~y~~~~--~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~~ 280 (1082)
++++|++++|++.. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996422 34999999999999999999999999999999999999999999999999988776543 33
Q ss_pred -hhceEEccCCCcChh-cHHHHHhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 281 -EQMGLVSQEPALFAT-SIANNILLGKE--DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 281 -~~i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
+.++|++|++.+|+. |++||+.++.. .....+..+. +.+.++.+ |++.........||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKER-----AYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 679999999998864 99999987421 1111111111 11223332 4444445556789999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccccCCEEEEEeCCEEE
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIMVLKNGQVV 420 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~ 420 (1082)
||+.+|++|||||||++||+.+...+.+.|.++. .++|+|++||+++.+..+|+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999999875 368999999999998889999999999975
No 378
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-40 Score=360.59 Aligned_cols=211 Identities=36% Similarity=0.609 Sum_probs=182.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+ + ++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 1 l~~~~l~~~~~---~-~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWK---E-FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDIS 74 (235)
T ss_pred CeeEeEEEEeC---C-ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEE
Confidence 47899999996 2 37999999999999999999999999999999999999999999999999987654 378999
Q ss_pred EEcccCcccc-ccHHHHhccCCCC--C----CHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFS-TTIYENIKYGNED--A----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~-gTIreNl~~~~~~--~----~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||++.+|. .|+++|+.++... . .++++.++++..++.+++.+. ...||||||||++||||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lara 143 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRK-----------PETLSGGEQQRVAIARA 143 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcC-----------cccCCHHHHHHHHHHHH
Confidence 9999999995 7999999864221 1 123456667777766554433 35799999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhc
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKE 1062 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~ 1062 (1082)
++++|++|+|||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 9999999999999999999999999999998653 8999999999999875 9999999999999999999998643
No 379
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=6e-41 Score=359.88 Aligned_cols=210 Identities=30% Similarity=0.492 Sum_probs=180.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+ +.++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~i~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAG---DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeC---CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 499999999996 34699999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEcccCccccccHHHHhccCC---CC-CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHc
Q 001411 914 GLVQQEPALFSTTIYENIKYGN---ED-ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAIL 989 (1082)
Q Consensus 914 ~~VpQdp~Lf~gTIreNl~~~~---~~-~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL 989 (1082)
+|+||++.+|+.|+++|+.++. .. ..++++.+.++..++.+ +.......+||||||||++|||||+
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHHHHHh
Confidence 9999999999999999997531 11 11223334444444421 2334456789999999999999999
Q ss_pred cCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhccCEEEEEe-CCEEEEecChH
Q 001411 990 KNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQ-QGKVAEIGSHE 1056 (1082)
Q Consensus 990 ~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~-~G~ive~G~~~ 1056 (1082)
++|+++||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999999999998753 789999999999998899999995 56667788885
No 380
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=4e-41 Score=359.02 Aligned_cols=201 Identities=34% Similarity=0.575 Sum_probs=170.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCC--CCHHHHhcc
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRT--LNLRSLRRK 912 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~--i~~~~lR~~ 912 (1082)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999963 469999999999999999999999999999999999999999999999999853 455678899
Q ss_pred eEEEcccCcccc-ccHHHHhccCCC---CCCHH----HHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHH
Q 001411 913 IGLVQQEPALFS-TTIYENIKYGNE---DASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 984 (1082)
Q Consensus 913 i~~VpQdp~Lf~-gTIreNl~~~~~---~~~d~----ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaL 984 (1082)
++|+||+|.+|+ .|++||+.++.. ..+.+ ++.++++..++.+ .......+||||||||++|
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~l 146 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLAD-----------KADAYPAQLSGGQQQRVAI 146 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHh-----------HhhhCccccCHHHHHHHHH
Confidence 999999999986 699999976421 12222 2334444444433 3333446899999999999
Q ss_pred HHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEE
Q 001411 985 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKV 1049 (1082)
Q Consensus 985 ARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~i 1049 (1082)
|||++++|++|||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++
T Consensus 147 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 147 ARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999875 47899999999999965 999999999975
No 381
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=372.50 Aligned_cols=219 Identities=30% Similarity=0.534 Sum_probs=187.0
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCccCCCC--C
Q 001411 833 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRTL--N 905 (1082)
Q Consensus 833 g~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~i--~ 905 (1082)
..|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++... +
T Consensus 44 ~~l~i~nl~~~~~---~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYG---DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 3699999999996 3469999999999999999999999999999999999986 6899999999998753 4
Q ss_pred HHHHhcceEEEcccCccccccHHHHhccCCCC-------------------CCHHHHHHHHHHhcHHHHHhhCccccccc
Q 001411 906 LRSLRRKIGLVQQEPALFSTTIYENIKYGNED-------------------ASEIELMKATKAANAHGFISRMPEGYQSH 966 (1082)
Q Consensus 906 ~~~lR~~i~~VpQdp~Lf~gTIreNl~~~~~~-------------------~~d~ei~~al~~a~l~~~i~~lp~gldt~ 966 (1082)
...+|++++|+||++.+|++|+++|+.++... ..++++.++++.+++.+ ++++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWD-------EVNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCch-------hhhHH
Confidence 56788999999999999999999999864210 01233455555555432 33344
Q ss_pred ccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhc-cCEE-EEE
Q 001411 967 VGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKI-AVL 1044 (1082)
Q Consensus 967 v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI-~Vl 1044 (1082)
....+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++..++.|+|+|||+++.+.. ||+| ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 55667889999999999999999999999999999999999999999999998777899999999999865 9997 578
Q ss_pred eCCEEEEecChHHHhhh
Q 001411 1045 QQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 1045 ~~G~ive~G~~~eLl~~ 1061 (1082)
++|++++.|+++++.+.
T Consensus 274 ~~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 274 TGGELVEYDDTDKIFEN 290 (305)
T ss_pred cCCEEEEeCCHHHHHhC
Confidence 99999999999999764
No 382
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-41 Score=371.36 Aligned_cols=212 Identities=33% Similarity=0.510 Sum_probs=178.2
Q ss_pred EEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHH----hhh
Q 001411 207 EFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL----REQ 282 (1082)
Q Consensus 207 ~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~----~~~ 282 (1082)
.++|+++.|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 46688888864 348999999999999999999999999999999999999999999999999887665443 457
Q ss_pred ceEEccCCCcCh-hcHHHHHhcCCCC--CC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 001411 283 MGLVSQEPALFA-TSIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 355 (1082)
Q Consensus 283 i~~v~Q~~~l~~-~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lA 355 (1082)
++|++|++.+|+ .|++||+.++... .. .+++.++++..++.+.+.+ ...+||||||||++||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrv~lA 172 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHK-----------YPDELSGGMQQRVGLA 172 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------CcccCCHHHHHHHHHH
Confidence 999999999885 5999999875321 11 2334455555555444443 3458999999999999
Q ss_pred HhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 356 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 356 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|||+.+|++|||||||++||+.+.+.+.+.|.++. .++|+|++||+++.+. .||++++|++|++++.|+++++.+.
T Consensus 173 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 173 RALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999999999999999999998874 3789999999999875 4899999999999999999988754
No 383
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-41 Score=368.47 Aligned_cols=213 Identities=29% Similarity=0.458 Sum_probs=184.0
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++|++++|++. .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 11 ~l~i~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPGR--TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECCE--EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 58999999999743 4999999999999999999999999999999999999999999999999998777778888999
Q ss_pred EEccCCCcChh-cHHHHHhcCCCC----------CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 001411 285 LVSQEPALFAT-SIANNILLGKED----------ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~----------~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~ 353 (1082)
|++|++.++.. |+.||+.++... ...+++.++++..++.+.+.. ...+||||||||++
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~ 157 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHR-----------LVDSLSGGERQRAW 157 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcC-----------CcccCCHHHHHHHH
Confidence 99999877665 999999876321 012345555666555444333 33589999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhh
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
|||||+.+|+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 99999999999999999999999999999999998743 789999999999985 589999999999999999888765
No 384
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-41 Score=351.23 Aligned_cols=217 Identities=34% Similarity=0.581 Sum_probs=192.2
Q ss_pred cEEEEEEEEECCCCCC----------------------ccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCc
Q 001411 205 QIEFSEVCFAYPSRPH----------------------MVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSG 262 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~----------------------~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G 262 (1082)
.|+++||++-|+.++. ..++|+||+++.||+..|.|-||||||||++++.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 5888999988865321 147899999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHHh----hhceEEccCCCcChh-cHHHHHhcCCCCC------CHHHHHHHHHHhchHHHHhcCCC
Q 001411 263 KILLDGHDLKSLQLKWLR----EQMGLVSQEPALFAT-SIANNILLGKEDA------SMDRVIEAAKAANAHSFVEGLPD 331 (1082)
Q Consensus 263 ~i~~~g~~~~~~~~~~~~----~~i~~v~Q~~~l~~~-ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~lp~ 331 (1082)
+|.++|.|+..++.+++| +++++|+|+.-|++. ||.||..||.+-. ..++..++++.++++.+-.+.|+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 999999999999877664 579999999999987 9999999997532 34566778888888888877775
Q ss_pred CccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccc-ccC
Q 001411 332 GYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTV-RDV 408 (1082)
Q Consensus 332 g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~-~~~ 408 (1082)
+||||+||||.|||||..+|+|||+|||+|||||--+..+++.|.++.+ +||+|+|||++++. +-.
T Consensus 164 -----------eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 164 -----------ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred -----------cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 8999999999999999999999999999999999999999999887743 69999999999986 457
Q ss_pred CEEEEEeCCEEEEecCchhhhhcC
Q 001411 409 DTIMVLKNGQVVESGTHVDLISKG 432 (1082)
Q Consensus 409 d~i~~l~~G~i~~~g~~~~l~~~~ 432 (1082)
|||..|++|+|+..|+|+|++.+.
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~P 256 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNP 256 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCc
Confidence 999999999999999999999774
No 385
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-41 Score=370.01 Aligned_cols=216 Identities=30% Similarity=0.511 Sum_probs=184.2
Q ss_pred cEEEEEEEEECCCC----CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCC-HHHH
Q 001411 205 QIEFSEVCFAYPSR----PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ-LKWL 279 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~----~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~ 279 (1082)
-++++|++++|++. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.... ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 48999999999742 235999999999999999999999999999999999999999999999999987543 3557
Q ss_pred hhhceEEccCCC--cChhcHHHHHhcCCCC--CC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHH
Q 001411 280 REQMGLVSQEPA--LFATSIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 351 (1082)
Q Consensus 280 ~~~i~~v~Q~~~--l~~~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqr 351 (1082)
++.++|++|+|. ++..|+.+|+.++... .+ .+++.++++..++.+++.+ ...+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRH-----------APHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHH
Confidence 888999999984 6767999999886321 11 2334555555555544444 346899999999
Q ss_pred HHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhh
Q 001411 352 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 352 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
++|||||+.+|+++||||||++||+.+...+.+.|.++. .+.|+|++||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999874 378999999999998889999999999999999999987
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
.+
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 54
No 386
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=367.50 Aligned_cols=216 Identities=32% Similarity=0.531 Sum_probs=183.6
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++|++++|++....+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 58999999999754345999999999999999999999999999999999999999999999999998877778888999
Q ss_pred EEccCCC--cChhcHHHHHhcCCCC--CCHH----HHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 285 LVSQEPA--LFATSIANNILLGKED--ASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 285 ~v~Q~~~--l~~~ti~~ni~~g~~~--~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
|++|+|. ++..|+++|+.++... ...+ ++.++++..++.+ .......+||||||||++|||
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~lar 155 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLE-----------RADYEPNALSGGQKQRVAIAG 155 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCch-----------hhhCCcccCCHHHHHHHHHHH
Confidence 9999985 4455899999886432 1222 2333333333322 333455689999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccccCCEEEEEeCCEEEEecCchhhhhc
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|++.+|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 156 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 156 VLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998753 6899999999998878999999999999999999888654
No 387
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=368.89 Aligned_cols=214 Identities=29% Similarity=0.522 Sum_probs=183.7
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|++++|+++ ..+|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.++|
T Consensus 4 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (277)
T PRK13652 4 IETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGL 82 (277)
T ss_pred EEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEE
Confidence 7899999999643 249999999999999999999999999999999999999999999999999887777778889999
Q ss_pred EccCC--CcChhcHHHHHhcCCC--CCCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHh
Q 001411 286 VSQEP--ALFATSIANNILLGKE--DASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 357 (1082)
Q Consensus 286 v~Q~~--~l~~~ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARa 357 (1082)
|+|++ .+++.|+.||+.++.. ..+. +++.++++..++.+.+.+ ....||||||||++||||
T Consensus 83 v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrl~lara 151 (277)
T PRK13652 83 VFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDR-----------VPHHLSGGEKKRVAIAGV 151 (277)
T ss_pred EecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcC-----------CcccCCHHHHHHHHHHHH
Confidence 99998 3677899999987532 1122 234455555555444333 345899999999999999
Q ss_pred cccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 358 VLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 358 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|+.+|+++||||||++||+.+.+.+.+.++++.+ +.|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 152 L~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 152 IAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 9999999999999999999999999999998753 789999999999985 6999999999999999999998754
No 388
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=365.48 Aligned_cols=212 Identities=26% Similarity=0.396 Sum_probs=183.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC--------ccEEEECCccCCCCCH
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPI--------SGTVLIDGYDIRTLNL 906 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~--------~G~I~idG~di~~i~~ 906 (1082)
|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+.
T Consensus 2 l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARR---HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEEC---CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 78999999996 346999999999999999999999999999999999999998 9999999999988888
Q ss_pred HHHhcceEEEcccCc-cccccHHHHhccCCC-C------CC---HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCC
Q 001411 907 RSLRRKIGLVQQEPA-LFSTTIYENIKYGNE-D------AS---EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 975 (1082)
Q Consensus 907 ~~lR~~i~~VpQdp~-Lf~gTIreNl~~~~~-~------~~---d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LS 975 (1082)
..+|+.++|+||++. +|+.|+++|+.++.. . .+ ++.++++++..++ ++.++.....||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGA-----------TALVGRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCc-----------HhhhcCCcccCC
Confidence 888889999999986 578899999976421 1 11 1234445555544 334445567899
Q ss_pred hhHHHHHHHHHHHc---------cCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh-ccCEEEE
Q 001411 976 GGQKQRVAIARAIL---------KNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAV 1043 (1082)
Q Consensus 976 gGQrQrlaLARAlL---------~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~V 1043 (1082)
||||||++|||||+ .+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+. .||++++
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~ 227 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAM 227 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999 59999999999999999999999999998753 789999999999996 4999999
Q ss_pred EeCCEEEEecChHHHhh
Q 001411 1044 LQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 1044 l~~G~ive~G~~~eLl~ 1060 (1082)
|++|++++.|++++++.
T Consensus 228 l~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 228 LADGAIVAHGAPADVLT 244 (272)
T ss_pred EECCeEEEecCHHHHcC
Confidence 99999999999999875
No 389
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.8e-41 Score=357.78 Aligned_cols=201 Identities=36% Similarity=0.642 Sum_probs=169.3
Q ss_pred EEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEE
Q 001411 207 EFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLV 286 (1082)
Q Consensus 207 ~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v 286 (1082)
+++|++++|++....+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.|+|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 36899999975223599999999999999999999999999999999999999999999999999877777788899999
Q ss_pred ccCCC--cChhcHHHHHhcCCCC--CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhc
Q 001411 287 SQEPA--LFATSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 358 (1082)
Q Consensus 287 ~Q~~~--l~~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal 358 (1082)
+|++. +++.|++||+.++... ... +++.+.++..+ ++.........||||||||++|||||
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSgG~~qrv~laral 149 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVG-----------LEGLRDRSPFTLSGGQKQRVAIAGVL 149 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------cHhhhcCCcccCCHHHHHHHHHHHHH
Confidence 99984 5678999999875321 111 12233333333 33334455578999999999999999
Q ss_pred ccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC-CCeEEEEccCcccccc-CCEEEEEeCCE
Q 001411 359 LRNPKILLLDEATSALDAESELIVQRALEKIMS-NRTTIVVAHRLSTVRD-VDTIMVLKNGQ 418 (1082)
Q Consensus 359 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~vtH~~~~~~~-~d~i~~l~~G~ 418 (1082)
+.+|+++||||||++||+.+++.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|+
T Consensus 150 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 150 AMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999998754 7899999999999876 99999999884
No 390
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-41 Score=365.52 Aligned_cols=218 Identities=31% Similarity=0.463 Sum_probs=183.1
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCCCCHHHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSLQLKWL 279 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~~~~~~ 279 (1082)
.++++|++++|++. ++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+...+
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQV--EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECCe--eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 48999999999753 499999999999999999999999999999999999974 79999999999987777788
Q ss_pred hhhceEEccCCCcC-hhcHHHHHhcCCCCC----C----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 280 REQMGLVSQEPALF-ATSIANNILLGKEDA----S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 280 ~~~i~~v~Q~~~l~-~~ti~~ni~~g~~~~----~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
++.|+|++|++.++ +.|++||+.++.... . .+++.++++..++.+. .+........+|||||||
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgG~~q 153 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDE-------VKDRLDAPAGKLSGGQQQ 153 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcc-------hhhhhcCCcccCCHHHHH
Confidence 88999999999765 569999998753210 1 1233344444433211 112334556789999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++|||||+++|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 99999999999999999999999999999999999998877899999999999885 58999999999999999998886
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
+.
T Consensus 234 ~~ 235 (250)
T PRK14247 234 TN 235 (250)
T ss_pred cC
Confidence 54
No 391
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=366.35 Aligned_cols=218 Identities=29% Similarity=0.449 Sum_probs=182.6
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC--C---CCcEEEECCeeCCC--CCHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE--P---TSGKILLDGHDLKS--LQLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~--~---~~G~i~~~g~~~~~--~~~~ 277 (1082)
.|+++|+++.|++. ++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|+++.. .+..
T Consensus 12 ~l~i~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQH--HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECCe--eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 58999999999743 49999999999999999999999999999999999997 3 69999999999863 3455
Q ss_pred HHhhhceEEccCCCcChhcHHHHHhcCCCCC---CHH----HHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 278 WLREQMGLVSQEPALFATSIANNILLGKEDA---SMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~---~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
.+++.++|++|++.+|+.|++||+.++.... ..+ ++.++++..++.+.+ .+.....+.+|||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEV-------KDRLHTQALSLSGGQQQ 162 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhhhhCCcccCCHHHHH
Confidence 6788999999999999999999998763211 112 222333333332211 23345667789999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++|||||+.+|+++||||||++||+.+...+.+.|.++.+++|+|+|||+++.+. .||++++|++|++++.|+++++.
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999999999999999999999999877789999999999876 48999999999999999999886
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
.+
T Consensus 243 ~~ 244 (259)
T PRK14274 243 SN 244 (259)
T ss_pred hC
Confidence 54
No 392
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=366.51 Aligned_cols=219 Identities=30% Similarity=0.501 Sum_probs=183.9
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC-----CCCcEEEECCeeCCC--CCH
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQL 276 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 276 (1082)
..++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 12 ~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~ 89 (269)
T PRK14259 12 IIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDP 89 (269)
T ss_pred ceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCH
Confidence 35999999999975 349999999999999999999999999999999999987 699999999998853 456
Q ss_pred HHHhhhceEEccCCCcChhcHHHHHhcCCCCC--C---HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHH
Q 001411 277 KWLREQMGLVSQEPALFATSIANNILLGKEDA--S---MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 351 (1082)
Q Consensus 277 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~--~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqr 351 (1082)
..+|+.++|++|++.+|+.|++||+.++.... . .+++.++++..++. .++++.......+||||||||
T Consensus 90 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~LS~G~~qr 162 (269)
T PRK14259 90 VEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVW-------DECKDKLNESGYSLSGGQQQR 162 (269)
T ss_pred HHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCc-------chhhhhhCCCcccCCHHHHHH
Confidence 67788899999999999889999999864321 1 12233334433322 223334556677899999999
Q ss_pred HHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeC-----------CEE
Q 001411 352 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKN-----------GQV 419 (1082)
Q Consensus 352 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~-----------G~i 419 (1082)
++|||||+.+|+++||||||++||+.+...+.+.|.++.+++|+|++||+++.+. .||++++|++ |++
T Consensus 163 l~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~ 242 (269)
T PRK14259 163 LCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYL 242 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceE
Confidence 9999999999999999999999999999999999998876789999999999885 5899999996 678
Q ss_pred EEecCchhhhhc
Q 001411 420 VESGTHVDLISK 431 (1082)
Q Consensus 420 ~~~g~~~~l~~~ 431 (1082)
++.|+++++...
T Consensus 243 ~~~~~~~~~~~~ 254 (269)
T PRK14259 243 VEFNETKKIFNS 254 (269)
T ss_pred EEeCCHHHHHhC
Confidence 999999888653
No 393
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=5.7e-41 Score=357.74 Aligned_cols=203 Identities=33% Similarity=0.567 Sum_probs=170.7
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
|+++|++++|++. ++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ++.++|
T Consensus 1 i~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGNV--TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECCe--eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 4789999999753 499999999999999999999999999999999999999999999999998765432 467999
Q ss_pred EccCCCcCh-hcHHHHHhcCCCC--CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhc
Q 001411 286 VSQEPALFA-TSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 358 (1082)
Q Consensus 286 v~Q~~~l~~-~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal 358 (1082)
++|++.+|+ .|++||+.++... ... +++.++++..++ +........+||||||||++|||||
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qr~~laral 145 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQI-----------EHLLDRKPKQLSGGQRQRVALGRAI 145 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------HHHHhCChhhCCHHHHHHHHHHHHH
Confidence 999999886 4999999875321 111 223333444433 3334445568999999999999999
Q ss_pred ccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCcccccc-CCEEEEEeCCEEEEec
Q 001411 359 LRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 423 (1082)
Q Consensus 359 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g 423 (1082)
+.+|+++||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999875 37899999999998765 8999999999998765
No 394
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=9.5e-41 Score=367.92 Aligned_cols=214 Identities=25% Similarity=0.461 Sum_probs=180.3
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHH---HHhh
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK---WLRE 281 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~~ 281 (1082)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+++
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 5899999999974 3499999999999999999999999999999999999999999999999998766543 3567
Q ss_pred hceEEccCCCcChh-cHHHHHhcCCCC---CCHH----HHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 001411 282 QMGLVSQEPALFAT-SIANNILLGKED---ASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 282 ~i~~v~Q~~~l~~~-ti~~ni~~g~~~---~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~ 353 (1082)
.++|++|++.+|+. |+.||+.++... .+.+ ++.+.++.. |+.........+||||||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgGq~qrv~ 153 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAV-----------GLRGAAKLMPSELSGGMARRAA 153 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHc-----------CChhhhhCChhhCCHHHHHHHH
Confidence 89999999999986 999999864211 1111 222233333 3333334455689999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhh
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
|||||+.+|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998743 6899999999998865 89999999999999999999876
Q ss_pred c
Q 001411 431 K 431 (1082)
Q Consensus 431 ~ 431 (1082)
.
T Consensus 234 ~ 234 (269)
T PRK11831 234 N 234 (269)
T ss_pred C
Confidence 4
No 395
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=4.3e-40 Score=407.23 Aligned_cols=108 Identities=30% Similarity=0.510 Sum_probs=95.6
Q ss_pred cccc-cccCCCCCCChhHHHHHHHHHHHccCC---CEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh
Q 001411 962 GYQS-HVGDRGVQLSGGQKQRVAIARAILKNP---SILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR 1036 (1082)
Q Consensus 962 gldt-~v~e~G~~LSgGQrQrlaLARAlL~~~---~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~ 1036 (1082)
|++. .++.....||||||||++|||+|+++| +++||||||++||+.+.+.+.+.|++.. ++.|||+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 5554 467777889999999999999999999 9999999999999999999999999875 5889999999999998
Q ss_pred ccCEEEEE------eCCEEEEecChHHHhhhccchHHHH
Q 001411 1037 NADKIAVL------QQGKVAEIGSHEQLLRKENGIYKQL 1069 (1082)
Q Consensus 1037 ~~DrI~Vl------~~G~ive~G~~~eLl~~~~g~f~~l 1069 (1082)
.||+|++| ++|+|++.|+|+++.+.+.+.-.+.
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~~~s~t~~~ 936 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKVEASYTGRY 936 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhCcccHHHHH
Confidence 99999999 6999999999999997655443333
No 396
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8.4e-41 Score=363.03 Aligned_cols=217 Identities=31% Similarity=0.553 Sum_probs=181.1
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCC--CHHHHhhhc
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL--QLKWLREQM 283 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~--~~~~~~~~i 283 (1082)
++++|++++|++ .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++... +...+++.+
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999974 3499999999999999999999999999999999999999999999999998754 345677889
Q ss_pred eEEccCCCcCh-hcHHHHHhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcc
Q 001411 284 GLVSQEPALFA-TSIANNILLGKE---DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVL 359 (1082)
Q Consensus 284 ~~v~Q~~~l~~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~ 359 (1082)
+|++|++.++. .|++||+.++.. ....++..+ .+.+.++.+ |++.........||||||||++||||++
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~ 152 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKV--GLAERAHHYPSELSGGQQQRVAIARALA 152 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHHh
Confidence 99999998886 499999987531 111111111 112233333 4544455566789999999999999999
Q ss_pred cCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhc
Q 001411 360 RNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 360 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
.+|+++||||||++||+++...+.+.|.++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 153 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 153 VKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 9999999999999999999999999998875 47899999999999865 899999999999999998887653
No 397
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=362.37 Aligned_cols=205 Identities=31% Similarity=0.463 Sum_probs=175.1
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhc
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 283 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 283 (1082)
..|+++|++++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+++.+
T Consensus 11 ~~l~i~~l~~~~~~~--~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 11 TPLLLNAVSKRYGER--TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred CcEEEEEEEEEECCc--ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 359999999999753 4999999999999999999999999999999999999999999999998753 456789
Q ss_pred eEEccCCCcCh-hcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCC
Q 001411 284 GLVSQEPALFA-TSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 362 (1082)
Q Consensus 284 ~~v~Q~~~l~~-~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~ 362 (1082)
+|++|++.+|+ .|++||+.++......+++.++++..++.+ .......+||||||||++|||||+.+|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLAD-----------RANEWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChh-----------HhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999887 599999988643222334455555554433 334455789999999999999999999
Q ss_pred CeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCch
Q 001411 363 KILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHV 426 (1082)
Q Consensus 363 ~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~ 426 (1082)
+++||||||++||+.+...+.+.|.++. .++|+|+|||+++.+. .||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998873 3789999999999875 58999999999999888654
No 398
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=8.3e-41 Score=374.18 Aligned_cols=200 Identities=28% Similarity=0.477 Sum_probs=172.4
Q ss_pred cccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceEEEcccCccccc-cHH
Q 001411 850 ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFST-TIY 928 (1082)
Q Consensus 850 ~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~VpQdp~Lf~g-TIr 928 (1082)
.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|++++|+||++.+|+. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 469999999999999999999999999999999999999999999999999876 345778999999999999876 999
Q ss_pred HHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCC
Q 001411 929 ENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATS 1002 (1082)
Q Consensus 929 eNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS 1002 (1082)
+|+.+... ..+ ++.+.++++..++.+. ......+||||||||++|||||+++|++|||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEA-----------ADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhH-----------hCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99976321 112 2234455555555432 223345799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhh
Q 001411 1003 ALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 1003 ~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
+||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999875 47899999999999975 999999999999999999999764
No 399
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=9.6e-41 Score=342.98 Aligned_cols=172 Identities=44% Similarity=0.748 Sum_probs=161.4
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|++++|++...++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 47899999997533459999999999999999999999999999999999999999999999999988888888899999
Q ss_pred EccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCee
Q 001411 286 VSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL 365 (1082)
Q Consensus 286 v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~il 365 (1082)
++|++++|+.|++||+ ||||||||++||||++.+|+++
T Consensus 81 ~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~l 118 (173)
T cd03246 81 LPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRIL 118 (173)
T ss_pred ECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999997 9999999999999999999999
Q ss_pred EEeCcccCCCHHHHHHHHHHHHHHcC-CCeEEEEccCccccccCCEEEEEeCCEE
Q 001411 366 LLDEATSALDAESELIVQRALEKIMS-NRTTIVVAHRLSTVRDVDTIMVLKNGQV 419 (1082)
Q Consensus 366 llDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~vtH~~~~~~~~d~i~~l~~G~i 419 (1082)
||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||++++|++|++
T Consensus 119 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 119 VLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999988754 7899999999999888999999999974
No 400
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=365.12 Aligned_cols=212 Identities=26% Similarity=0.463 Sum_probs=182.8
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|++++|++ ..+|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+..++++.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999974 349999999999999999999999999999999999999999999999999887777788888999
Q ss_pred EccCCCcChh-cHHHHHhcCCCC-------C---CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 001411 286 VSQEPALFAT-SIANNILLGKED-------A---SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 354 (1082)
Q Consensus 286 v~Q~~~l~~~-ti~~ni~~g~~~-------~---~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~l 354 (1082)
++|++.++++ |+.||+.++... . ..+++.++++..++.+ ........||||||||++|
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~l 149 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINH-----------LADRRLTDLSGGQRQRAFL 149 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHH-----------HHcCCcccCCHHHHHHHHH
Confidence 9999988876 999999886311 0 1223444444444433 2334556899999999999
Q ss_pred HHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhh
Q 001411 355 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 355 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
|||++.+|++|||||||++||+.+...+.+.|.++. +++|+|++||+++.+. .||++++|++|+++..|+++++..
T Consensus 150 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 150 AMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 999999999999999999999999999999998875 4789999999999876 489999999999999999988765
No 401
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.2e-40 Score=362.57 Aligned_cols=221 Identities=24% Similarity=0.449 Sum_probs=183.8
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHH-Hhhhce
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW-LREQMG 284 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~i~ 284 (1082)
|+++|+++.|++. ++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.++
T Consensus 3 i~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 3 LYLEGLSVSFDGF--KALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred EEEEeeEEEcCCe--EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 7899999999753 4999999999999999999999999999999999999999999999999987776554 345799
Q ss_pred EEccCCCcChh-cHHHHHhcCCCCCC--HHH---HHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhc
Q 001411 285 LVSQEPALFAT-SIANNILLGKEDAS--MDR---VIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 358 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~~~--~~~---~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal 358 (1082)
|++|++.+|++ |++||+.++..... ... .........+.+.++.+ |++.........||||||||++||||+
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~laral 158 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGMLL 158 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 99999999987 99999987532110 000 00000111123344444 555556667789999999999999999
Q ss_pred ccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhh
Q 001411 359 LRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 359 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
+.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 159 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 159 MQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred hcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 9999999999999999999999999999998777899999999999865 99999999999999999888764
No 402
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.5e-40 Score=354.09 Aligned_cols=202 Identities=35% Similarity=0.589 Sum_probs=175.7
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
++++||+++|+ . .++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ .+|+.++
T Consensus 1 ~~~~~l~~~~~---~--~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYE---H--LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeC---C--cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 36899999995 1 468999999999999999999999999999999999999999999999987654 4678899
Q ss_pred EEcccCccccc-cHHHHhccCC-CC-----CCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFST-TIYENIKYGN-ED-----ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~g-TIreNl~~~~-~~-----~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||+|.+|.+ |+++|+.++. +. ..++++.++++..++.+...+.| .+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 9999997532 11 12345667778877766655543 4799999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecC
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGS 1054 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~ 1054 (1082)
++++|+|+||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999999998753 7899999999999865 99999999999999874
No 403
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1e-40 Score=368.78 Aligned_cols=214 Identities=34% Similarity=0.565 Sum_probs=187.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+.+|.. +..+|+||||+|++||.+|++||||||||||+++|+|++.|++|+|.++|.|...- ...+|+++
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4789999999962 35799999999999999999999999999999999999999999999999998765 77889999
Q ss_pred EEEcccCccccc-cHHHHhccCCC------CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHH
Q 001411 914 GLVQQEPALFST-TIYENIKYGNE------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 986 (1082)
Q Consensus 914 ~~VpQdp~Lf~g-TIreNl~~~~~------~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLAR 986 (1082)
|||||+|.+++. |++|||.+... ...++.+.+.++..++.+.- ......||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-----------NKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-----------CcchhhcCHHHHHHHHHHH
Confidence 999999998865 99999987421 12245677788887775521 2234569999999999999
Q ss_pred HHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC-C-ceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhh
Q 001411 987 AILKNPSILLLDEATSALDTASENLIQEALDKLME-G-RTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 987 AlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~-~-~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
||+.+|++|||||||++||+.+...+.+.|++..+ + +||++.||.++.+.. ||+|++|++|+++..|+++++...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999864 5 799999999999987 999999999999999999998753
No 404
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-41 Score=359.10 Aligned_cols=204 Identities=34% Similarity=0.502 Sum_probs=170.8
Q ss_pred EEEEEEEEECCCCC--CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhc
Q 001411 206 IEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 283 (1082)
Q Consensus 206 i~~~~v~~~y~~~~--~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 283 (1082)
++++|++++|++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. +++.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 46899999997421 359999999999999999999999999999999999999999999999998763 35679
Q ss_pred eEEccCCCcCh-hcHHHHHhcCCCC--CC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 001411 284 GLVSQEPALFA-TSIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 356 (1082)
Q Consensus 284 ~~v~Q~~~l~~-~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lAR 356 (1082)
+||+|++.+|+ .|++||+.++... .. .+++.+.++..++.+ .......+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSG-----------FENAYPHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh-----------hhhCCcccCCHHHHHHHHHHH
Confidence 99999999887 5999999875321 11 123344444444433 334444689999999999999
Q ss_pred hcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccc-cCCEEEEEe--CCEEEEecCc
Q 001411 357 AVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVR-DVDTIMVLK--NGQVVESGTH 425 (1082)
Q Consensus 357 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~-~~d~i~~l~--~G~i~~~g~~ 425 (1082)
||+.+|+++||||||++||+.+...+.+.|+++. .++|+|++||+++.+. .||++++|+ +|++++.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999873 3789999999999875 589999999 7999988764
No 405
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1e-40 Score=375.15 Aligned_cols=223 Identities=26% Similarity=0.388 Sum_probs=183.5
Q ss_pred cEEEEEEEEECCCC-----------CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCC
Q 001411 205 QIEFSEVCFAYPSR-----------PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKS 273 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~-----------~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~ 273 (1082)
-++++|++++|+.. ...+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 58999999999631 2349999999999999999999999999999999999999999999999999988
Q ss_pred CCHHH---HhhhceEEccCC--CcCh-hcHHHHHhcCC----CCCCHHH----HHHHHHHhchHHHHhcCCCCccccccC
Q 001411 274 LQLKW---LREQMGLVSQEP--ALFA-TSIANNILLGK----EDASMDR----VIEAAKAANAHSFVEGLPDGYQTQVGE 339 (1082)
Q Consensus 274 ~~~~~---~~~~i~~v~Q~~--~l~~-~ti~~ni~~g~----~~~~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~g~ 339 (1082)
.+... +|++|+||+|+| .+++ .||.|||.++. +..+.++ +.+.++..++. +.....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~----------~~~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLL----------PNLINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCC----------hHHhcC
Confidence 76543 567899999998 4664 59999997532 1122222 22333333331 112345
Q ss_pred CCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeC
Q 001411 340 GGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKN 416 (1082)
Q Consensus 340 ~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~ 416 (1082)
...+|||||||||+|||||+.+|++||+||||++||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 5678999999999999999999999999999999999999999999998753 7899999999999875 999999999
Q ss_pred CEEEEecCchhhhhcC-chhHH
Q 001411 417 GQVVESGTHVDLISKG-GEYAA 437 (1082)
Q Consensus 417 G~i~~~g~~~~l~~~~-~~~~~ 437 (1082)
|++++.|+.+++.++. ..|.+
T Consensus 238 G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHH
Confidence 9999999999998653 34544
No 406
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=367.21 Aligned_cols=213 Identities=30% Similarity=0.458 Sum_probs=178.2
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCC--CCCHHHHhhhc
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLK--SLQLKWLREQM 283 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~--~~~~~~~~~~i 283 (1082)
++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++. ..+...+|+.|
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 689999999974 34999999999999999999999999999999999999999999999999985 23445677889
Q ss_pred eEEccCCC--cChhcHHHHHhcCCC--CCCHH----HHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 001411 284 GLVSQEPA--LFATSIANNILLGKE--DASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 355 (1082)
Q Consensus 284 ~~v~Q~~~--l~~~ti~~ni~~g~~--~~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lA 355 (1082)
+|++|++. ++..|+.+|+.++.. ..+.+ ++.++++..++.++ ......+||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~la 148 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHF-----------RHQPIQCLSHGQKKRVAIA 148 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhH-----------hcCCchhCCHHHHHHHHHH
Confidence 99999985 567799999987421 11222 23334444443322 2344568999999999999
Q ss_pred HhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 356 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 356 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|||+.+|+++||||||++||+.+...+.+.|.++. +++|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 149 raL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 149 GALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999875 4789999999999985 4999999999999999998887654
No 407
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.2e-40 Score=354.31 Aligned_cols=210 Identities=28% Similarity=0.446 Sum_probs=184.5
Q ss_pred EEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCH----HHHhhh
Q 001411 207 EFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL----KWLREQ 282 (1082)
Q Consensus 207 ~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~----~~~~~~ 282 (1082)
.+.|+.|+|++. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ...|+.
T Consensus 2 ~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 80 (218)
T cd03290 2 QVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYS 80 (218)
T ss_pred eeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcce
Confidence 578999999754 459999999999999999999999999999999999999999999999998765432 235677
Q ss_pred ceEEccCCCcChhcHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCC
Q 001411 283 MGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 362 (1082)
Q Consensus 283 i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~ 362 (1082)
++|++|++.+|+.|++||+.++.+. ..++..++++..++.+.+..+|.|+++.++....+||||||||++||||++.+|
T Consensus 81 i~~~~q~~~~~~~t~~~nl~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 81 VAYAAQKPWLLNATVEENITFGSPF-NKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred EEEEcCCCccccccHHHHHhhcCcC-CHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 9999999999988999999987543 345566777888888888889999999999999999999999999999999999
Q ss_pred CeeEEeCcccCCCHHHHHHHHH--HHHHHc-CCCeEEEEccCccccccCCEEEEEeCCE
Q 001411 363 KILLLDEATSALDAESELIVQR--ALEKIM-SNRTTIVVAHRLSTVRDVDTIMVLKNGQ 418 (1082)
Q Consensus 363 ~illlDEpts~LD~~~~~~i~~--~l~~~~-~~~t~i~vtH~~~~~~~~d~i~~l~~G~ 418 (1082)
+++||||||++||+.+...+.+ .+..+. .++|+|++||+++.+..||++++|++|+
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 9999999999999999988887 455443 3689999999999988899999999874
No 408
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=362.81 Aligned_cols=219 Identities=32% Similarity=0.558 Sum_probs=182.8
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCC--CCH
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKS--LQL 276 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~~ 276 (1082)
+.++++|+++.|++. ++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGDF--QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECCc--eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 358999999999753 499999999999999999999999999999999999763 69999999999864 345
Q ss_pred HHHhhhceEEccCCCcChhcHHHHHhcCCCCC---C----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHH
Q 001411 277 KWLREQMGLVSQEPALFATSIANNILLGKEDA---S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQK 349 (1082)
Q Consensus 277 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqk 349 (1082)
..+|+.++|++|++.+|+.|++||+.++.... . .+++.++++..++.+ ++.......+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWD-------EVKDRLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhHHHHhcCCCCCCHHHH
Confidence 56788999999999999899999998763211 1 122333344443322 222334556778999999
Q ss_pred HHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhh
Q 001411 350 QRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 428 (1082)
Q Consensus 350 qri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 428 (1082)
||++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778899999999998765 899999999999999998887
Q ss_pred hhc
Q 001411 429 ISK 431 (1082)
Q Consensus 429 ~~~ 431 (1082)
...
T Consensus 233 ~~~ 235 (250)
T PRK14240 233 FTN 235 (250)
T ss_pred HhC
Confidence 643
No 409
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.5e-40 Score=361.92 Aligned_cols=227 Identities=27% Similarity=0.440 Sum_probs=186.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC----CccEEEECCccCCCCCHHHH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP----ISGTVLIDGYDIRTLNLRSL 909 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p----~~G~I~idG~di~~i~~~~l 909 (1082)
.|+++||+++|. .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..
T Consensus 4 ~l~~~~l~~~~~----~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~ 77 (254)
T PRK10418 4 QIELRNIALQAA----QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALR 77 (254)
T ss_pred EEEEeCeEEEec----cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--ccc
Confidence 489999999992 3699999999999999999999999999999999999999 999999999998632 223
Q ss_pred hcceEEEcccCc-ccc--ccHHHHhccC----CCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 910 RRKIGLVQQEPA-LFS--TTIYENIKYG----NEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 910 R~~i~~VpQdp~-Lf~--gTIreNl~~~----~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
++.++||||+|. .|. .|+.+|+... .....+++++++++.+++.++ ++.++.....||||||||+
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHH
Confidence 467999999985 343 4887776431 112234556677777666432 1133455678999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHh
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1059 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl 1059 (1082)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999999865 9999999999999999999998
Q ss_pred hhccc-hHHHHHHHhh
Q 001411 1060 RKENG-IYKQLIRLQQ 1074 (1082)
Q Consensus 1060 ~~~~g-~f~~l~~~~~ 1074 (1082)
+++.. .++.++..+.
T Consensus 230 ~~~~~~~~~~~~~~~~ 245 (254)
T PRK10418 230 NAPKHAVTRSLVSAHL 245 (254)
T ss_pred hCCCCHHHHHHHHhhh
Confidence 75444 4555666544
No 410
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=9.4e-41 Score=359.00 Aligned_cols=214 Identities=26% Similarity=0.419 Sum_probs=170.7
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc---CCccEEEECCccCCCCCHHHHh
Q 001411 835 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD---PISGTVLIDGYDIRTLNLRSLR 910 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~lR 910 (1082)
+.|+||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 67999999997432 3579999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cceEEEcccCccccc-cHHHHhccCCCCCCHHHHHHHHHHhcHHH-HHhhCcccccccccCCCCCCChhHHHHHHHHHHH
Q 001411 911 RKIGLVQQEPALFST-TIYENIKYGNEDASEIELMKATKAANAHG-FISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAI 988 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~g-TIreNl~~~~~~~~d~ei~~al~~a~l~~-~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAl 988 (1082)
++++|+||++.+|++ |++||+.++...................+ .++.+ +++.........||||||||++|||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 999999999999987 99999986421110000000011111111 22221 233233345578999999999999999
Q ss_pred ccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCc-hhh-hccCEEEEEeCCEEEEec
Q 001411 989 LKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRL-STI-RNADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 989 L~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl-~ti-~~~DrI~Vl~~G~ive~G 1053 (1082)
+++|++|||||||++||+.+.+.+.+.|++.. +++|+|++||++ +.+ ..||+|++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999875 478999999998 465 559999999999999876
No 411
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.2e-40 Score=362.97 Aligned_cols=212 Identities=24% Similarity=0.351 Sum_probs=175.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccc--cCCccEEEECCccCCCCCHHHH-hc
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFY--DPISGTVLIDGYDIRTLNLRSL-RR 911 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~--~p~~G~I~idG~di~~i~~~~l-R~ 911 (1082)
|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.+||.++...+.... |.
T Consensus 1 l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVE---DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEEC---CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 57899999996 346999999999999999999999999999999999994 7999999999999988877664 45
Q ss_pred ceEEEcccCccccc-cHHHHhccCCCC---------CC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCC-CCCh
Q 001411 912 KIGLVQQEPALFST-TIYENIKYGNED---------AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGV-QLSG 976 (1082)
Q Consensus 912 ~i~~VpQdp~Lf~g-TIreNl~~~~~~---------~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~-~LSg 976 (1082)
.++|+||+|.+|++ |+++|+.+.... .+ ++.+.++++..++.+ . ....... .|||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~---~~~~~~~~~LS~ 147 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDE-------E---FLNRSVNEGFSG 147 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCch-------h---hcccccccCcCH
Confidence 69999999999876 899998653110 11 122333343433321 1 1122222 4999
Q ss_pred hHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhc--cCEEEEEeCCEEEEec
Q 001411 977 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN--ADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 977 GQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~--~DrI~Vl~~G~ive~G 1053 (1082)
|||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 148 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g 227 (243)
T TIGR01978 148 GEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSG 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEec
Confidence 99999999999999999999999999999999999999999875 47899999999999975 7999999999999999
Q ss_pred ChHHHh
Q 001411 1054 SHEQLL 1059 (1082)
Q Consensus 1054 ~~~eLl 1059 (1082)
+++++.
T Consensus 228 ~~~~~~ 233 (243)
T TIGR01978 228 DVELAK 233 (243)
T ss_pred CHHHhc
Confidence 998654
No 412
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=365.32 Aligned_cols=220 Identities=29% Similarity=0.462 Sum_probs=185.3
Q ss_pred CCcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC-----CCCcEEEECCeeCCC--CC
Q 001411 203 AGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQ 275 (1082)
Q Consensus 203 ~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~ 275 (1082)
...|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 18 ~~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 18 EIALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred CeEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 346999999999974 359999999999999999999999999999999999996 589999999999864 34
Q ss_pred HHHHhhhceEEccCCCcChhcHHHHHhcCCCCC---CH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHH
Q 001411 276 LKWLREQMGLVSQEPALFATSIANNILLGKEDA---SM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQ 348 (1082)
Q Consensus 276 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~---~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGq 348 (1082)
...+++.|+|++|++.+|+.|++||+.++.... .. +++.++++..++.+. .++..+..+.+|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------i~~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQ-------VKDDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCch-------hhhhhcCCcccCCHHH
Confidence 556788899999999999899999998753211 11 223333444433222 2234567778999999
Q ss_pred HHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchh
Q 001411 349 KQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVD 427 (1082)
Q Consensus 349 kqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 427 (1082)
|||++||||++++|+++||||||++||+.+.+.+.+.|.++.++.|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 248 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRN 248 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999998877789999999999875 599999999999999999988
Q ss_pred hhhc
Q 001411 428 LISK 431 (1082)
Q Consensus 428 l~~~ 431 (1082)
+...
T Consensus 249 ~~~~ 252 (267)
T PRK14237 249 IFTN 252 (267)
T ss_pred HhcC
Confidence 8653
No 413
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.3e-41 Score=361.70 Aligned_cols=211 Identities=28% Similarity=0.452 Sum_probs=178.3
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHH-Hhhhce
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW-LREQMG 284 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~i~ 284 (1082)
|+++|+++.|++. ++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+... .++.++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQS--HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCCe--EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 4789999999753 4999999999999999999999999999999999999999999999999998776554 466899
Q ss_pred EEccCCCcChh-cHHHHHhcCCCCC--CHH-HHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhccc
Q 001411 285 LVSQEPALFAT-SIANNILLGKEDA--SMD-RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLR 360 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~~~~--~~~-~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~ 360 (1082)
|++|++.+|+. |++||+.++.... ..+ ...++++..+ ++.........+||||||||++|||||++
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999986 9999998764321 111 1122222221 12233455667899999999999999999
Q ss_pred CCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhh
Q 001411 361 NPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 428 (1082)
Q Consensus 361 ~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 428 (1082)
+|+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|+++++|++++.|+++++
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 9999999999999999999999999998754 6899999999999875 899999999999999998887
No 414
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=8.8e-41 Score=356.55 Aligned_cols=201 Identities=31% Similarity=0.519 Sum_probs=170.1
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHH---HHhhh
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK---WLREQ 282 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~~~ 282 (1082)
++++|++++|+++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++..++.. .+++.
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 6899999999532 3599999999999999999999999999999999999999999999999999876543 46778
Q ss_pred ceEEccCCCcCh-hcHHHHHhcCCCC--C----CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 001411 283 MGLVSQEPALFA-TSIANNILLGKED--A----SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 355 (1082)
Q Consensus 283 i~~v~Q~~~l~~-~ti~~ni~~g~~~--~----~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lA 355 (1082)
++|++|++.+|. .|++||+.++... . ..+++.++++..++.+.+.+ ...+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la 149 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADA-----------FPEQLSGGEQQRVAIA 149 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHHHHH
Confidence 999999999986 5999999875211 1 12344555555555443333 3358999999999999
Q ss_pred HhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCE
Q 001411 356 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQ 418 (1082)
Q Consensus 356 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~ 418 (1082)
|||+.+|+++||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|+
T Consensus 150 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 150 RAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999875 47899999999999875 89999999885
No 415
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=368.48 Aligned_cols=218 Identities=30% Similarity=0.507 Sum_probs=180.6
Q ss_pred EEEEEEEEECCCCC---CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCC----CHHH
Q 001411 206 IEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL----QLKW 278 (1082)
Q Consensus 206 i~~~~v~~~y~~~~---~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~----~~~~ 278 (1082)
++++|++++|++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997432 3599999999999999999999999999999999999999999999999998753 3456
Q ss_pred HhhhceEEccCC--CcChhcHHHHHhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCcc-ccccCCCCCCChHHHHHHH
Q 001411 279 LREQMGLVSQEP--ALFATSIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQ-TQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 279 ~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~g~~g~~LSgGqkqri~ 353 (1082)
+++.|+|++|++ .+|+.|++||+.++... .+.++..+.+ .+.++.+ |++ ........+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALA-----REKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788899999998 67888999999875321 1222222111 1222222 333 2345566789999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC-CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhh
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS-NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
|||||+.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQ 234 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998754 789999999999886 489999999999999999888765
No 416
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-40 Score=358.79 Aligned_cols=218 Identities=26% Similarity=0.412 Sum_probs=179.6
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHH-Hhhhc
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW-LREQM 283 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~i 283 (1082)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... +++.+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 4899999999974 34999999999999999999999999999999999999999999999999988776543 57789
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCC
Q 001411 284 GLVSQEPALFAT-SIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 362 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~ 362 (1082)
+|++|++.+|+. |++||+.++......++..+.+. +.++.++ ++..........||||||||++||||++.+|
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIK-----WVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQP 156 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHH-----HHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhCC
Confidence 999999999985 99999988643222222111111 1111111 1111223455689999999999999999999
Q ss_pred CeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhh
Q 001411 363 KILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 363 ~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 157 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 157 RLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 9999999999999999999999998875 4789999999999765 589999999999999999998864
No 417
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-40 Score=362.41 Aligned_cols=212 Identities=28% Similarity=0.476 Sum_probs=181.6
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|++++|++. .+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 3 l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (258)
T PRK13548 3 LEARNLSVRLGGR--TLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAV 80 (258)
T ss_pred EEEEeEEEEeCCe--eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEE
Confidence 7899999999753 49999999999999999999999999999999999999999999999999887777777888999
Q ss_pred EccCCCc-ChhcHHHHHhcCCCCC--C----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhc
Q 001411 286 VSQEPAL-FATSIANNILLGKEDA--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 358 (1082)
Q Consensus 286 v~Q~~~l-~~~ti~~ni~~g~~~~--~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal 358 (1082)
++|++.+ ++.|++||+.++.... . .+++.++++..++.+ ........||||||||++|||||
T Consensus 81 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGe~qrv~la~al 149 (258)
T PRK13548 81 LPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAH-----------LAGRDYPQLSGGEQQRVQLARVL 149 (258)
T ss_pred EccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHh-----------HhcCCcccCCHHHHHHHHHHHHH
Confidence 9999987 5669999998764211 1 123344444444433 33445568999999999999999
Q ss_pred c------cCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhh
Q 001411 359 L------RNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 359 ~------~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
+ .+|+++||||||++||+.+...+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 150 ~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 150 AQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVL 229 (258)
T ss_pred hcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHh
Confidence 9 5999999999999999999999999999875 4789999999999886 59999999999999999988876
Q ss_pred h
Q 001411 430 S 430 (1082)
Q Consensus 430 ~ 430 (1082)
.
T Consensus 230 ~ 230 (258)
T PRK13548 230 T 230 (258)
T ss_pred C
Confidence 5
No 418
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=366.82 Aligned_cols=218 Identities=28% Similarity=0.471 Sum_probs=181.5
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC-----CCCcEEEECCeeCCC--CCHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~~~ 277 (1082)
.++++|++++|++ ..+|+|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 5899999999974 349999999999999999999999999999999999864 799999999999864 3345
Q ss_pred HHhhhceEEccCCCcChhcHHHHHhcCCCCC---C----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 278 WLREQMGLVSQEPALFATSIANNILLGKEDA---S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
.+++.++|++|++.+|+.|++||+.++.... . .+.+.++++..++. .+.....+..+.+|||||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~~~~~~~LSgGq~q 171 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALW-------DEVKDRLHSSALSLSGGQQQ 171 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCC-------cchHHHHhcCcccCCHHHHH
Confidence 6788899999999999999999998753211 1 11223333333221 11123345667799999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 172 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 172 RLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred HHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999876789999999999875 58999999999999999988876
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
.+
T Consensus 252 ~~ 253 (268)
T PRK14248 252 TS 253 (268)
T ss_pred hC
Confidence 54
No 419
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.3e-40 Score=364.14 Aligned_cols=217 Identities=33% Similarity=0.534 Sum_probs=179.9
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCC----------
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ---------- 275 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~---------- 275 (1082)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 478999999975 34999999999999999999999999999999999999999999999999886542
Q ss_pred ---HHHHhhhceEEccCCCcCh-hcHHHHHhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHH
Q 001411 276 ---LKWLREQMGLVSQEPALFA-TSIANNILLGKE---DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQ 348 (1082)
Q Consensus 276 ---~~~~~~~i~~v~Q~~~l~~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGq 348 (1082)
...+++.++|++|++.+|+ .|+.||+.++.. ....++..+ .+.+.++.+ |++.........|||||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~ 151 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEK-----RAMELLDMV--GLADKADHMPAQLSGGQ 151 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhHhhcChhhcCHHH
Confidence 2456788999999999886 699999987521 111111111 112233333 44444555667899999
Q ss_pred HHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCc
Q 001411 349 KQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTH 425 (1082)
Q Consensus 349 kqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~ 425 (1082)
|||++|||||+.+|+++||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+. .||++++|++|++++.|++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 231 (252)
T TIGR03005 152 QQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKP 231 (252)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999998753 789999999999985 5899999999999999999
Q ss_pred hhhhhc
Q 001411 426 VDLISK 431 (1082)
Q Consensus 426 ~~l~~~ 431 (1082)
+++.+.
T Consensus 232 ~~~~~~ 237 (252)
T TIGR03005 232 DEIFRQ 237 (252)
T ss_pred HHHhcC
Confidence 888654
No 420
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=381.02 Aligned_cols=199 Identities=33% Similarity=0.553 Sum_probs=170.8
Q ss_pred cccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHH----hhhceEEccCCCcChh-c
Q 001411 222 VFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL----REQMGLVSQEPALFAT-S 296 (1082)
Q Consensus 222 ~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~----~~~i~~v~Q~~~l~~~-t 296 (1082)
+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +++++||+|++.+|+. |
T Consensus 43 ~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~T 122 (400)
T PRK10070 43 GVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMT 122 (400)
T ss_pred EEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCC
Confidence 7999999999999999999999999999999999999999999999999988776543 3579999999999975 9
Q ss_pred HHHHHhcCCCC--CC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCc
Q 001411 297 IANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEA 370 (1082)
Q Consensus 297 i~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEp 370 (1082)
++||+.++... .. .+++.++++..++.+. ......+||||||||++|||||+.+|++||||||
T Consensus 123 v~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~-----------~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEP 191 (400)
T PRK10070 123 VLDNTAFGMELAGINAEERREKALDALRQVGLENY-----------AHSYPDELSGGMRQRVGLARALAINPDILLMDEA 191 (400)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChh-----------hhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 99999986321 11 2234444555544333 3344468999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 371 TSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 371 ts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|++||+.+.+.+++.|.++. .++|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 192 ts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 192 FSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 99999999999999999874 4789999999999875 5899999999999999999998765
No 421
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=366.50 Aligned_cols=219 Identities=30% Similarity=0.488 Sum_probs=184.6
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCC--CCH
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKS--LQL 276 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~~ 276 (1082)
+.++++|++++|+++ ++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 24 ~~l~~~nl~~~~~~~--~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~ 101 (272)
T PRK14236 24 TALEVRNLNLFYGDK--QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDV 101 (272)
T ss_pred cEEEEEEEEEEECCe--eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCH
Confidence 469999999999743 499999999999999999999999999999999999884 89999999999864 345
Q ss_pred HHHhhhceEEccCCCcChhcHHHHHhcCCCCC---C----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHH
Q 001411 277 KWLREQMGLVSQEPALFATSIANNILLGKEDA---S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQK 349 (1082)
Q Consensus 277 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqk 349 (1082)
..+++.++|++|++.+|+.|++||+.++.... . .+++.++++..++.+. ..+..+..+.+||||||
T Consensus 102 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~Gq~ 174 (272)
T PRK14236 102 AELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDE-------VKDRLHENAFGLSGGQQ 174 (272)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChh-------HHHHhhCCcccCCHHHH
Confidence 56788999999999999899999998753211 1 1223344444433222 22345667789999999
Q ss_pred HHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhh
Q 001411 350 QRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDL 428 (1082)
Q Consensus 350 qri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 428 (1082)
||++|||||+++|+++||||||++||+.+...+.+.|.++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 175 qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 254 (272)
T PRK14236 175 QRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTL 254 (272)
T ss_pred HHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHH
Confidence 999999999999999999999999999999999999999877789999999999875 5899999999999999998887
Q ss_pred hhc
Q 001411 429 ISK 431 (1082)
Q Consensus 429 ~~~ 431 (1082)
...
T Consensus 255 ~~~ 257 (272)
T PRK14236 255 FTS 257 (272)
T ss_pred hcC
Confidence 643
No 422
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-40 Score=360.50 Aligned_cols=217 Identities=27% Similarity=0.501 Sum_probs=179.1
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCC------CCCHHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLK------SLQLKW 278 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~------~~~~~~ 278 (1082)
.++++|+++.|++. .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...
T Consensus 2 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 2 SIQLNGINCFYGAH--QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEEeeEEEECCe--eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 37899999999753 4999999999999999999999999999999999999999999999999873 123456
Q ss_pred HhhhceEEccCCCcChh-cHHHHHhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 001411 279 LREQMGLVSQEPALFAT-SIANNILLGKE---DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 354 (1082)
Q Consensus 279 ~~~~i~~v~Q~~~l~~~-ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~l 354 (1082)
+++.|+|++|++.+|+. |++||+.++.. ....++..+ .+.+.++.+ |++..+.....+||||||||++|
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~l 152 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALA-----RAEKLLERL--RLKPYADRFPLHLSGGQQQRVAI 152 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHH
Confidence 77889999999999876 99999974311 111111111 112333333 45445555667899999999999
Q ss_pred HHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhh
Q 001411 355 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 355 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
|||++.+|+++||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 153 aral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 153 ARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 999999999999999999999999999999999875 47899999999999864 89999999999999999887643
No 423
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.9e-40 Score=364.91 Aligned_cols=217 Identities=30% Similarity=0.452 Sum_probs=180.2
Q ss_pred EEEEEEEEECCCC-------CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHH-
Q 001411 206 IEFSEVCFAYPSR-------PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK- 277 (1082)
Q Consensus 206 i~~~~v~~~y~~~-------~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~- 277 (1082)
++++|++|+|++. ...+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 24599999999999999999999999999999999999999999999999998876654
Q ss_pred --HHhhhceEEccCCC--cCh-hcHHHHHhcCCC---CCC----HHHHHHHHHHhchHHHHhcCCCCcc-ccccCCCCCC
Q 001411 278 --WLREQMGLVSQEPA--LFA-TSIANNILLGKE---DAS----MDRVIEAAKAANAHSFVEGLPDGYQ-TQVGEGGTQL 344 (1082)
Q Consensus 278 --~~~~~i~~v~Q~~~--l~~-~ti~~ni~~g~~---~~~----~~~~~~~~~~~~~~~~i~~lp~g~~-t~~g~~g~~L 344 (1082)
.+++.|+|++|++. +++ .|++||+.++.. ... .+++.++ ++.+ |++ ......+..|
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~---------l~~~--gl~~~~~~~~~~~L 151 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAEL---------LDMV--GLRSEDADKLPRQL 151 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHH---------HHHc--CCChhhhhCChhhC
Confidence 35778999999983 443 599999965321 111 1222233 3333 443 2345667789
Q ss_pred ChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEE
Q 001411 345 SGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVE 421 (1082)
Q Consensus 345 SgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~ 421 (1082)
|||||||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+. .||++++|++|++++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 231 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVE 231 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999998753 789999999999987 489999999999999
Q ss_pred ecCchhhhhcCc
Q 001411 422 SGTHVDLISKGG 433 (1082)
Q Consensus 422 ~g~~~~l~~~~~ 433 (1082)
.|+++++.....
T Consensus 232 ~g~~~~~~~~~~ 243 (265)
T TIGR02769 232 ECDVAQLLSFKH 243 (265)
T ss_pred ECCHHHHcCCCC
Confidence 999999986433
No 424
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=370.05 Aligned_cols=221 Identities=27% Similarity=0.491 Sum_probs=180.1
Q ss_pred CcEEEEEEEEECCCCC---CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCC----C-C
Q 001411 204 GQIEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKS----L-Q 275 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~---~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~----~-~ 275 (1082)
+.|+++|++++|+++. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. . +
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 5699999999997542 249999999999999999999999999999999999999999999999998752 2 3
Q ss_pred HHHHhhhceEEccCC--CcChhcHHHHHhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHH
Q 001411 276 LKWLREQMGLVSQEP--ALFATSIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 351 (1082)
Q Consensus 276 ~~~~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqr 351 (1082)
...+|+.|+|++|++ .+|+.|++||+.++... ...++..+.+ ..+.+.+ .+|.+ ........||||||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~--~~ll~~~-~L~~~---~~~~~~~~LS~Gq~qr 158 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKV--PELLKLV-QLPED---YVKRSPFELSGGQKRR 158 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHH--HHHHHHc-CCChh---HhcCChhhCCHHHHHH
Confidence 456788899999998 46778999999876421 1222221111 1111111 23222 3445667899999999
Q ss_pred HHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhh
Q 001411 352 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDL 428 (1082)
Q Consensus 352 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 428 (1082)
++|||||+.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 159 v~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 238 (289)
T PRK13645 159 VALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEI 238 (289)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999988743 789999999999875 5899999999999999998887
Q ss_pred hh
Q 001411 429 IS 430 (1082)
Q Consensus 429 ~~ 430 (1082)
..
T Consensus 239 ~~ 240 (289)
T PRK13645 239 FS 240 (289)
T ss_pred hc
Confidence 54
No 425
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.6e-40 Score=356.53 Aligned_cols=209 Identities=29% Similarity=0.495 Sum_probs=178.7
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.|+++|+++.|++. ++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 7 ~i~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGDA--KILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCCc--eeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 58999999999743 4999999999999999999999999999999999999999999999999998888777888999
Q ss_pred EEccCCCcChhcHHHHHhcCCC---CC-CHHHHHHHHHHhchHHHHhcCCCCcc-ccccCCCCCCChHHHHHHHHHHhcc
Q 001411 285 LVSQEPALFATSIANNILLGKE---DA-SMDRVIEAAKAANAHSFVEGLPDGYQ-TQVGEGGTQLSGGQKQRIAIARAVL 359 (1082)
Q Consensus 285 ~v~Q~~~l~~~ti~~ni~~g~~---~~-~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~g~~g~~LSgGqkqri~lARal~ 359 (1082)
|++|++.+|+.|++||+.++.. .. ..+++. +.++.+ |+. +.......+||||||||++|||||+
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~---------~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFL---------DDLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHHHHHH---------HHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHh
Confidence 9999999999999999986421 11 111222 233333 342 3456677899999999999999999
Q ss_pred cCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccccCCEEEEEe-CCEEEEecCch
Q 001411 360 RNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIMVLK-NGQVVESGTHV 426 (1082)
Q Consensus 360 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~~~d~i~~l~-~G~i~~~g~~~ 426 (1082)
++|+++||||||++||+.+.+.+.+.|.++. .++|+|++||+++.++.||++++|+ ++..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999999874 3789999999999998899999995 66777888775
No 426
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=364.02 Aligned_cols=218 Identities=31% Similarity=0.496 Sum_probs=181.8
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhC---CCC--CCcEEEECCeeCCCC--CHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRL---YEP--TSGKILLDGHDLKSL--QLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~---~~~--~~G~i~~~g~~~~~~--~~~ 277 (1082)
.++++|+++.|++ ..+|+|+||++++||+++|+||||||||||+++|+|+ ++| ++|+|.++|+++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 4889999999975 3499999999999999999999999999999999997 454 589999999998653 345
Q ss_pred HHhhhceEEccCCCcChhcHHHHHhcCCCCC---CH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 278 WLREQMGLVSQEPALFATSIANNILLGKEDA---SM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~---~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
.+++.++|++|++.+|+.|++||+.++.... .. +++.++++..++ ++...+.....+.+|||||||
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~~~~~~~LS~G~~q 153 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAAL-------WDEVKDKLKESAFALSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCC-------CcchhhhhhCCcccCCHHHHH
Confidence 6788899999999999889999998753211 11 122333333332 222223456677899999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++|||||+.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999999999999999999999999877899999999999885 58999999999999999999886
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
++
T Consensus 234 ~~ 235 (250)
T PRK14245 234 TN 235 (250)
T ss_pred cC
Confidence 54
No 427
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.3e-40 Score=355.26 Aligned_cols=202 Identities=33% Similarity=0.526 Sum_probs=169.9
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCH---HHHhhh
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL---KWLREQ 282 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~~~~ 282 (1082)
++++|++++|++. ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++.
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4689999999743 359999999999999999999999999999999999999999999999999877654 346778
Q ss_pred ceEEccCCCcChh-cHHHHHhcCCCC--CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 001411 283 MGLVSQEPALFAT-SIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 355 (1082)
Q Consensus 283 i~~v~Q~~~l~~~-ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lA 355 (1082)
++|++|++.+|+. |++||+.++... ... +++.++++..++.+. ......+||||||||++||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la 148 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHK-----------HRALPAELSGGEQQRVAIA 148 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCChhhcCHHHHHHHHHH
Confidence 9999999999885 999999875321 111 233444444444333 3334458999999999999
Q ss_pred HhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEE
Q 001411 356 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQV 419 (1082)
Q Consensus 356 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i 419 (1082)
|||+.+|+++||||||++||+++.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++
T Consensus 149 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 149 RAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999874 47899999999999875 899999999974
No 428
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.6e-40 Score=361.69 Aligned_cols=218 Identities=30% Similarity=0.531 Sum_probs=181.1
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCC--------H
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ--------L 276 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~--------~ 276 (1082)
.++++|++++|+++ ++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ .
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHGQ--TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECCe--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 38899999999753 4999999999999999999999999999999999999999999999999986432 3
Q ss_pred HHHhhhceEEccCCCcCh-hcHHHHHhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHH
Q 001411 277 KWLREQMGLVSQEPALFA-TSIANNILLGKE---DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRI 352 (1082)
Q Consensus 277 ~~~~~~i~~v~Q~~~l~~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri 352 (1082)
..+++.++|++|++.+|+ .|++||+.++.. ....++..+. +.+.++.+ |++........+||||||||+
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv 153 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATAR-----ARELLAKV--GLAGKETSYPRRLSGGQQQRV 153 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CCcchhhCChhhCChHHHHHH
Confidence 456788999999999886 599999986421 1111111111 12233333 444445566789999999999
Q ss_pred HHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC-CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhh
Q 001411 353 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS-NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 353 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
+|||||+.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 154 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 233 (250)
T PRK11264 154 AIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFA 233 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999988754 7899999999999865 89999999999999999988764
Q ss_pred c
Q 001411 431 K 431 (1082)
Q Consensus 431 ~ 431 (1082)
.
T Consensus 234 ~ 234 (250)
T PRK11264 234 D 234 (250)
T ss_pred C
Confidence 3
No 429
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.3e-40 Score=372.88 Aligned_cols=217 Identities=28% Similarity=0.486 Sum_probs=178.0
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+|+.++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 4899999999974 3499999999999999999999999999999999999999999999999988653 355688899
Q ss_pred EEccCCCcCh-hcHHHHHhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccC
Q 001411 285 LVSQEPALFA-TSIANNILLGKE--DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRN 361 (1082)
Q Consensus 285 ~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~ 361 (1082)
|++|++.+++ .|++||+.+... ..+..+..+.+. +.++.+ |+.........+||||||||++|||||+.+
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~ll~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~ 153 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIP-----SLLEFA--RLESKADVRVALLSGGMKRRLTLARALIND 153 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHH-----HHHHHC--CChhHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 9999999886 499999975211 112222222111 111111 222223344468999999999999999999
Q ss_pred CCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhc
Q 001411 362 PKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 362 ~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|+++||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 154 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 154 PQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 99999999999999999999999999874 47899999999999864 999999999999999999888643
No 430
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-40 Score=362.18 Aligned_cols=218 Identities=31% Similarity=0.518 Sum_probs=183.3
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCC-----CcEEEECCeeCCCC--CHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT-----SGKILLDGHDLKSL--QLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~-----~G~i~~~g~~~~~~--~~~ 277 (1082)
.++++|++|+|++ ..+|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 5899999999974 34999999999999999999999999999999999999997 69999999988643 445
Q ss_pred HHhhhceEEccCCCcChhcHHHHHhcCCCC--C-CH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 278 WLREQMGLVSQEPALFATSIANNILLGKED--A-SM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
.+++.++|++|++.+|+.|++||+.++... . .. +.+.++++..++.+ +........+.+|||||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~Gq~q 154 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWD-------EVKDNLHKSGLALSGGQQQ 154 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCch-------hhhhHhhCCcccCCHHHHH
Confidence 678899999999999999999999876321 1 11 12222333333222 2233456777899999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988667899999999999876 7999999999999999988876
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
..
T Consensus 235 ~~ 236 (251)
T PRK14249 235 SR 236 (251)
T ss_pred hC
Confidence 53
No 431
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=361.29 Aligned_cols=217 Identities=26% Similarity=0.478 Sum_probs=182.5
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHH-Hhhhc
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW-LREQM 283 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~i 283 (1082)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 3789999999974 35999999999999999999999999999999999999999999999999988776544 56789
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCC---CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcc
Q 001411 284 GLVSQEPALFAT-SIANNILLGKED---ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVL 359 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~ 359 (1082)
+|++|++.+++. |++||+.++... .+.++.. ..+.+.++.+ |++.........||||||||++||||++
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~ 153 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE-----DRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARALA 153 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHH-----HHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHHh
Confidence 999999998885 999999875321 1111111 1122344444 4555556677899999999999999999
Q ss_pred cCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhh
Q 001411 360 RNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 360 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
.+|++|||||||++||+.+.+.+.+.+.++. +++|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 154 ANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 9999999999999999999999999998875 4789999999998775 589999999999999999988764
No 432
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=364.40 Aligned_cols=219 Identities=29% Similarity=0.450 Sum_probs=182.1
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCCC--CH
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSL--QL 276 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 276 (1082)
..++++|+++.|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 11 ~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 11 PQIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eeEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 35999999999974 3499999999999999999999999999999999999985 899999999988643 23
Q ss_pred HHHhhhceEEccCCCcChhcHHHHHhcCCCC--CCHH----HHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 277 KWLREQMGLVSQEPALFATSIANNILLGKED--ASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 277 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
..+++.++|++|++.+|+.|++||+.++... .+.+ ++.++++..++.+ ............|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWD-------ETSDRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc-------chhhhhcCChhhCCHHHHH
Confidence 4567889999999999999999999875321 1222 2333333333211 1122345566789999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999999998876799999999999885 48999999999999999998886
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
..
T Consensus 242 ~~ 243 (258)
T PRK14268 242 HN 243 (258)
T ss_pred cC
Confidence 43
No 433
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-40 Score=368.31 Aligned_cols=219 Identities=30% Similarity=0.531 Sum_probs=180.3
Q ss_pred cEEEEEEEEECCCCC---CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCC----CHH
Q 001411 205 QIEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL----QLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~---~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~----~~~ 277 (1082)
.|+++|++++|++.. ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997421 3599999999999999999999999999999999999999999999999998643 245
Q ss_pred HHhhhceEEccCC--CcChhcHHHHHhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCcc-ccccCCCCCCChHHHHHH
Q 001411 278 WLREQMGLVSQEP--ALFATSIANNILLGKE--DASMDRVIEAAKAANAHSFVEGLPDGYQ-TQVGEGGTQLSGGQKQRI 352 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~g~~g~~LSgGqkqri 352 (1082)
..++.|+|++|+| .+|+.|++|||.++.. ..+.++..+. +.+.++.+ |++ ........+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEK-----ALKWLKKV--GLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhHhhCCcccCCHHHHHHH
Confidence 6677899999998 5777899999987532 1122221111 11223332 443 234556678999999999
Q ss_pred HHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhh
Q 001411 353 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 353 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
+|||||+.+|++|||||||++||+.+.+.+.+.|.++. ++.|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 155 ~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 155 AIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999875 4789999999999875 599999999999999999988765
No 434
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.4e-40 Score=358.93 Aligned_cols=211 Identities=35% Similarity=0.537 Sum_probs=172.9
Q ss_pred EEEEEEEEECCCCC--CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCH---HHHh
Q 001411 206 IEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL---KWLR 280 (1082)
Q Consensus 206 i~~~~v~~~y~~~~--~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~~ 280 (1082)
++++||+++|++.. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68999999997531 259999999999999999999999999999999999999999999999999987663 5678
Q ss_pred hhceEEccCCC--cC-hhcHHHHHhcCCC----CCCHHHHHHHHHHhchHHHHhcCCCCcc-ccccCCCCCCChHHHHHH
Q 001411 281 EQMGLVSQEPA--LF-ATSIANNILLGKE----DASMDRVIEAAKAANAHSFVEGLPDGYQ-TQVGEGGTQLSGGQKQRI 352 (1082)
Q Consensus 281 ~~i~~v~Q~~~--l~-~~ti~~ni~~g~~----~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~g~~g~~LSgGqkqri 352 (1082)
+.++|++|++. ++ ..|++||+.++.. ....+....+. .+.++.+ |+. ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 89999999993 44 4699999976421 11111111110 1223333 342 345666778999999999
Q ss_pred HHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEec
Q 001411 353 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESG 423 (1082)
Q Consensus 353 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g 423 (1082)
+|||||+.+|+++||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998754 789999999999987 59999999999998754
No 435
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=363.55 Aligned_cols=214 Identities=26% Similarity=0.435 Sum_probs=183.9
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhc
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 283 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 283 (1082)
..|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.+
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999975 3499999999999999999999999999999999999999999999999999887777788899
Q ss_pred eEEccCCCcCh-hcHHHHHhcCC-CC------CC---HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHH
Q 001411 284 GLVSQEPALFA-TSIANNILLGK-ED------AS---MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRI 352 (1082)
Q Consensus 284 ~~v~Q~~~l~~-~ti~~ni~~g~-~~------~~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri 352 (1082)
+|++|++.+|. .|++||+.++. +. .. .+++.++++..++.+. .......||||||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHL-----------ADQSVDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHH-----------hcCCcccCChHHHHHH
Confidence 99999998875 59999998753 11 01 1234445555444333 3445578999999999
Q ss_pred HHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhh
Q 001411 353 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 353 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
+||||++.+|+++||||||++||+.+.+.+.+.|.++.+ +.|+|++||+++.+. .||++++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 689999999999875 58999999999999999998876
Q ss_pred h
Q 001411 430 S 430 (1082)
Q Consensus 430 ~ 430 (1082)
.
T Consensus 233 ~ 233 (265)
T PRK10253 233 T 233 (265)
T ss_pred h
Confidence 5
No 436
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.6e-40 Score=374.49 Aligned_cols=217 Identities=28% Similarity=0.491 Sum_probs=179.3
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.|+++|++++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.... ...++.||
T Consensus 41 ~i~i~nl~k~y~~~--~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGDK--AVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 59999999999743 4999999999999999999999999999999999999999999999999987544 46788899
Q ss_pred EEccCCCcCh-hcHHHHHhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccC
Q 001411 285 LVSQEPALFA-TSIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRN 361 (1082)
Q Consensus 285 ~v~Q~~~l~~-~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~ 361 (1082)
|+||++.++. .|++||+.+.... .+..+..+.++ .+.+. ..+++..++ ...+||||||||++|||||+.+
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~--~ll~~-~~L~~~~~~----~~~~LS~G~kqrv~lA~aL~~~ 190 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIP--SLLEF-ARLESKADA----RVSDLSGGMKRRLTLARALIND 190 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHH--HHHHH-cCCchhhCC----ChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999875 4999999853211 12222221111 11111 133333333 4458999999999999999999
Q ss_pred CCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhc
Q 001411 362 PKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 362 ~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|+++||||||++||+.+.+.+++.|.++. +++|+|++||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 191 P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 191 PQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 99999999999999999999999999875 47899999999999865 999999999999999999998653
No 437
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=9.7e-41 Score=355.81 Aligned_cols=198 Identities=33% Similarity=0.562 Sum_probs=165.2
Q ss_pred EEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEE
Q 001411 207 EFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLV 286 (1082)
Q Consensus 207 ~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v 286 (1082)
+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++. .+++.++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 36799999975 34999999999999999999999999999999999999999999999998764 467789999
Q ss_pred ccCCCc---ChhcHHHHHhcCCCCC----------CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 001411 287 SQEPAL---FATSIANNILLGKEDA----------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 287 ~Q~~~l---~~~ti~~ni~~g~~~~----------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~ 353 (1082)
+|++.+ ++.|++||+.++.... ..+++.++++..++.+.. .....+||||||||++
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~ 142 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELA-----------DRQIGELSGGQQQRVL 142 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHH-----------hCCcccCCHHHHHHHH
Confidence 999876 5679999998764311 112344445555444333 3344689999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEec
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 423 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g 423 (1082)
|||||+.+|+++||||||++||+.+.+.+.+.|.++. +++|+|++||+++.+.. ||++++|++| +++.|
T Consensus 143 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 143 LARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999999875 57899999999999865 8999999886 55543
No 438
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=363.57 Aligned_cols=218 Identities=31% Similarity=0.501 Sum_probs=181.3
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC-----CCCcEEEECCeeCCC--CCHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~~~ 277 (1082)
.|+++|++|+|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 4899999999974 349999999999999999999999999999999999997 489999999998854 3445
Q ss_pred HHhhhceEEccCCCcChhcHHHHHhcCCCCC---CH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 278 WLREQMGLVSQEPALFATSIANNILLGKEDA---SM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~---~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
.+++.++|++|++.+|+.|++||+.++.... .. +++.++++..+++. .........+.+|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~Gq~q 154 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWK-------ETKDNLDRNAQAFSGGQQQ 154 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCc-------chHHHhccChhhCCHHHHH
Confidence 6778899999999999999999998753211 11 12333333333311 0112234566799999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++||||++++|+++||||||++||+.+.+.+.+.|.++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767899999999998765 8999999999999999998876
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
..
T Consensus 235 ~~ 236 (251)
T PRK14251 235 IA 236 (251)
T ss_pred hC
Confidence 44
No 439
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-40 Score=362.66 Aligned_cols=218 Identities=28% Similarity=0.471 Sum_probs=181.1
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCC--CC---CCcEEEECCeeCCCC--CHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLY--EP---TSGKILLDGHDLKSL--QLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~--~~---~~G~i~~~g~~~~~~--~~~ 277 (1082)
.++++|++++|+++ .+|+|+||++++||+++|+||||||||||+++|+|++ +| ++|+|.++|+++... +..
T Consensus 5 ~l~~~~l~~~~~~~--~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNKK--KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECCe--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 48999999999743 4999999999999999999999999999999999985 36 599999999998642 345
Q ss_pred HHhhhceEEccCCCcChhcHHHHHhcCCCC---CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 278 WLREQMGLVSQEPALFATSIANNILLGKED---ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
.+++.++|++|++.+|+.|++||+.++... ... +++.++++..++.+ +..+..+....+|||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~~q 155 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWD-------EVKDRLHDSALGLSGGQQQ 155 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCch-------hHHHHHhcCcccCCHHHHH
Confidence 677889999999999999999999875211 111 22233333333221 1223455667789999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999998866789999999999875 58999999999999999999886
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
+.
T Consensus 236 ~~ 237 (252)
T PRK14239 236 MN 237 (252)
T ss_pred hC
Confidence 54
No 440
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.3e-40 Score=370.15 Aligned_cols=216 Identities=23% Similarity=0.445 Sum_probs=183.0
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +...+++.+||
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999974 349999999999999999999999999999999999999999999999999876 34567889999
Q ss_pred EccCCCcChh-cHHHHHhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCC
Q 001411 286 VSQEPALFAT-SIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 362 (1082)
Q Consensus 286 v~Q~~~l~~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~ 362 (1082)
+||++.+++. |++||+.+.... ...++..+. +.+.++.+ |++.........||||||||++|||||+.+|
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~p 152 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQR-----VEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHDP 152 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcCC
Confidence 9999999876 999999753211 111111111 11223333 4555556667799999999999999999999
Q ss_pred CeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhc
Q 001411 363 KILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 363 ~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
+++||||||++||+.+.+.+++.++++.+++|+|++||+++.+.. ||+|++|++|+++..|+++++.+.
T Consensus 153 ~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 153 KVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 999999999999999999999999998778999999999998865 999999999999999999998654
No 441
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.7e-40 Score=377.04 Aligned_cols=212 Identities=31% Similarity=0.500 Sum_probs=179.1
Q ss_pred eEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCC----HHHHhcceE
Q 001411 839 NVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN----LRSLRRKIG 914 (1082)
Q Consensus 839 ~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~----~~~lR~~i~ 914 (1082)
|++++|+. .. + |+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 4 ~l~~~~~~---~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGD---FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECC---EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 89999962 33 4 999999999999999999999999999999999999999999999986542 345688999
Q ss_pred EEcccCccccc-cHHHHhccCCCCCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHc
Q 001411 915 LVQQEPALFST-TIYENIKYGNEDASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAIL 989 (1082)
Q Consensus 915 ~VpQdp~Lf~g-TIreNl~~~~~~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL 989 (1082)
||||++.+|+. |+++|+.++...... +.+.+.++..++.+ .......+||||||||++|||||+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LSgGqkqRvalAraL~ 147 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGH-----------LLGRLPGRLSGGEKQRVAIGRALL 147 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChh-----------HhcCChhhCCHHHHHHHHHHHHHH
Confidence 99999999975 999999876432221 22444555554443 333445689999999999999999
Q ss_pred cCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhccchH
Q 001411 990 KNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKENGIY 1066 (1082)
Q Consensus 990 ~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~~g~f 1066 (1082)
++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++...|
T Consensus 148 ~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 227 (354)
T TIGR02142 148 SSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPW 227 (354)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCccc
Confidence 99999999999999999999999999998753 7899999999999865 99999999999999999999987655444
No 442
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-40 Score=362.40 Aligned_cols=218 Identities=29% Similarity=0.467 Sum_probs=183.9
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC-----CCCcEEEECCeeCCC--CCHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~~~ 277 (1082)
.|+++||+++|++. ++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+..
T Consensus 10 ~l~i~~v~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGSF--LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECCE--EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 58999999999743 49999999999999999999999999999999999986 489999999998853 3456
Q ss_pred HHhhhceEEccCCCcChhcHHHHHhcCCCCC--C---HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHH
Q 001411 278 WLREQMGLVSQEPALFATSIANNILLGKEDA--S---MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRI 352 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~--~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri 352 (1082)
.+++.++|++|++.+|+.|++||+.++.... . .+++.++++.+++.+.+. ...+..+.+||||||||+
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-------DKLKQSGLSLSGGQQQRL 160 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-------HHhcCCcccCCHHHHHHH
Confidence 7788899999999999889999998764311 1 123334445444433332 234556778999999999
Q ss_pred HHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEe---------CCEEEEe
Q 001411 353 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLK---------NGQVVES 422 (1082)
Q Consensus 353 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~---------~G~i~~~ 422 (1082)
+|||||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||+|++|+ +|++++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~ 240 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEF 240 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999998777899999999998765 89999998 8999999
Q ss_pred cCchhhhhc
Q 001411 423 GTHVDLISK 431 (1082)
Q Consensus 423 g~~~~l~~~ 431 (1082)
|+++++.+.
T Consensus 241 ~~~~~~~~~ 249 (264)
T PRK14243 241 DRTEKIFNS 249 (264)
T ss_pred CCHHHHHhC
Confidence 999998654
No 443
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=362.67 Aligned_cols=219 Identities=30% Similarity=0.526 Sum_probs=180.7
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCC---------
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL--------- 274 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~--------- 274 (1082)
+.++++|+++.|++ ..+|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (257)
T PRK10619 4 NKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKV 81 (257)
T ss_pred ccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccccc
Confidence 46999999999974 3499999999999999999999999999999999999999999999999987532
Q ss_pred ----CHHHHhhhceEEccCCCcChh-cHHHHHhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccccc-cCCCCCCC
Q 001411 275 ----QLKWLREQMGLVSQEPALFAT-SIANNILLGKE---DASMDRVIEAAKAANAHSFVEGLPDGYQTQV-GEGGTQLS 345 (1082)
Q Consensus 275 ----~~~~~~~~i~~v~Q~~~l~~~-ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~-g~~g~~LS 345 (1082)
....+++.++|++|++.+++. |++||+.++.. ....++..+ .+.+.++.+ |+.... ......||
T Consensus 82 ~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~~LS 154 (257)
T PRK10619 82 ADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARE-----RAVKYLAKV--GIDERAQGKYPVHLS 154 (257)
T ss_pred ccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHH-----HHHHHHHHc--CCChhhhhCCcccCC
Confidence 134567889999999999975 99999986421 111111111 111223333 443332 45667899
Q ss_pred hHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEec
Q 001411 346 GGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 423 (1082)
Q Consensus 346 gGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g 423 (1082)
||||||++|||||+++|+++||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 155 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~ 234 (257)
T PRK10619 155 GGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEG 234 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999875 47999999999999875 8999999999999999
Q ss_pred Cchhhhhc
Q 001411 424 THVDLISK 431 (1082)
Q Consensus 424 ~~~~l~~~ 431 (1082)
+++++...
T Consensus 235 ~~~~~~~~ 242 (257)
T PRK10619 235 APEQLFGN 242 (257)
T ss_pred CHHHhhhC
Confidence 99887653
No 444
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=361.10 Aligned_cols=202 Identities=30% Similarity=0.465 Sum_probs=171.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +..++
T Consensus 2 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYG---GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeC---CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 78999999996 34699999999999999999999999999999999999999999999999998642 34699
Q ss_pred EEcccCcccc-ccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFS-TTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~-gTIreNl~~~~~--~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
|+||++.+|+ .|+++|+.++.. .... +++.++++..++.+. ......+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGA-----------EKRYIWQLSGGQRQRVGIARA 142 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhH-----------hhCChhhCCHHHHHHHHHHHH
Confidence 9999999887 699999976421 1121 234455555555433 233456799999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhc-cCEEEEEe--CCEEEEecCh
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQ--QGKVAEIGSH 1055 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~--~G~ive~G~~ 1055 (1082)
|+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|++++.+++
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999999999999999999863 37999999999999865 99999998 5999998754
No 445
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.7e-40 Score=355.26 Aligned_cols=207 Identities=28% Similarity=0.373 Sum_probs=174.0
Q ss_pred cEEEEEEEEECCCCC--CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHH---H
Q 001411 205 QIEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW---L 279 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~--~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~ 279 (1082)
.++++|++++|++.. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 489999999997532 24999999999999999999999999999999999999999999999999998776543 2
Q ss_pred -hhhceEEccCCCcChh-cHHHHHhcCCC--CCC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHH
Q 001411 280 -REQMGLVSQEPALFAT-SIANNILLGKE--DAS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 351 (1082)
Q Consensus 280 -~~~i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqr 351 (1082)
++.++|++|++.+++. |+.||+.++.. ... .+++.++++..++.+.+.+ ....||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDH-----------LPAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------ChhhCCHHHHHH
Confidence 3579999999998875 99999986421 111 2334455555555444333 345899999999
Q ss_pred HHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccccCCEEEEEeCCEEEEe
Q 001411 352 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRDVDTIMVLKNGQVVES 422 (1082)
Q Consensus 352 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~~d~i~~l~~G~i~~~ 422 (1082)
++|||||+.+|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999998743 6899999999999888999999999999753
No 446
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-40 Score=360.28 Aligned_cols=217 Identities=28% Similarity=0.485 Sum_probs=182.9
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCC-CCCHHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLK-SLQLKW 278 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~-~~~~~~ 278 (1082)
.++++|+++.|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4889999999974 3499999999999999999999999999999999999986 5999999999885 345667
Q ss_pred HhhhceEEccCCCcChhcHHHHHhcCCCC--CC-H----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHH
Q 001411 279 LREQMGLVSQEPALFATSIANNILLGKED--AS-M----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 351 (1082)
Q Consensus 279 ~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~~-~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqr 351 (1082)
+++.++|++|++.+|+.|++||+.++... .. . +++.++++..++.+ ++.+.......+||||||||
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~LS~G~~qr 153 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWD-------EVKDRLKSHAFGLSGGQQQR 153 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCch-------hhhHHhhcCcccCCHHHHHH
Confidence 78899999999999999999999876321 11 1 22333344443322 22234456667899999999
Q ss_pred HHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhh
Q 001411 352 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 352 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFS 233 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999998777899999999999775 89999999999999999887754
No 447
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-40 Score=362.58 Aligned_cols=220 Identities=28% Similarity=0.492 Sum_probs=184.1
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCCCC-HHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSLQ-LKW 278 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~~-~~~ 278 (1082)
.++++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++...+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 5899999999974 3599999999999999999999999999999999999986 7999999999987653 456
Q ss_pred HhhhceEEccCCCcChhcHHHHHhcCCCC---CCHHHHHHHHHHhchHHHHh--cCCCCccccccCCCCCCChHHHHHHH
Q 001411 279 LREQMGLVSQEPALFATSIANNILLGKED---ASMDRVIEAAKAANAHSFVE--GLPDGYQTQVGEGGTQLSGGQKQRIA 353 (1082)
Q Consensus 279 ~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~--~lp~g~~t~~g~~g~~LSgGqkqri~ 353 (1082)
+++.++|++|++.+|+.|++||+.++... .+.++..+.+. +.++ .++..+.+.+...+.+||||||||++
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~-----~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~ 173 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQ-----ARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLC 173 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHH-----HHHHHcCCCchhhhHhhCCcccCCHHHHHHHH
Confidence 78899999999999999999999876321 12323222111 1122 22222234456677899999999999
Q ss_pred HHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhc
Q 001411 354 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 354 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|||||+.+|+++||||||++||+.+.+.+.+.|.++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 174 LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 252 (276)
T PRK14271 174 LARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSS 252 (276)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999988667899999999998764 899999999999999999998764
No 448
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.2e-40 Score=375.42 Aligned_cols=200 Identities=28% Similarity=0.447 Sum_probs=169.6
Q ss_pred ccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCe----eCCCCCHHHH---h-hhceEEccCCCc
Q 001411 221 MVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGH----DLKSLQLKWL---R-EQMGLVSQEPAL 292 (1082)
Q Consensus 221 ~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~----~~~~~~~~~~---~-~~i~~v~Q~~~l 292 (1082)
.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++...+...+ | ++|+||+|++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 3899999999999999999999999999999999999999999999996 5655655443 3 579999999999
Q ss_pred Ch-hcHHHHHhcCCCC--CC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCee
Q 001411 293 FA-TSIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL 365 (1082)
Q Consensus 293 ~~-~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~il 365 (1082)
|+ .|++||+.++... .+ .+++.++++..++.++ ......+||||||||++|||||+.+|+||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~-----------~~~~~~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQW-----------ADKKPGELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 98 5999999987421 11 1234445555544333 33444589999999999999999999999
Q ss_pred EEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccc-ccCCEEEEEeCCEEEEecCchhhhhc
Q 001411 366 LLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTV-RDVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 366 llDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|||||||+||+.+.+.+++.|.++.+ ++|+|+|||+++.+ +.||+|++|++|++++.|++++++.+
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 99999999999999999999998753 78999999999987 55999999999999999999999865
No 449
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-40 Score=360.67 Aligned_cols=219 Identities=28% Similarity=0.490 Sum_probs=182.5
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC--C---CCcEEEECCeeCCCC--CH
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE--P---TSGKILLDGHDLKSL--QL 276 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~--~---~~G~i~~~g~~~~~~--~~ 276 (1082)
+.|+++|++++|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|+++... +.
T Consensus 3 ~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 80 (252)
T PRK14256 3 NKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDP 80 (252)
T ss_pred cEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCCh
Confidence 46999999999974 349999999999999999999999999999999999986 4 699999999998643 34
Q ss_pred HHHhhhceEEccCCCcChh-cHHHHHhcCCCC---CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHH
Q 001411 277 KWLREQMGLVSQEPALFAT-SIANNILLGKED---ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQ 348 (1082)
Q Consensus 277 ~~~~~~i~~v~Q~~~l~~~-ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGq 348 (1082)
..+++.++|++|++.+|+. |++||+.++... .+. +++.++++..++.+.+ ....+..+.+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~ 153 (252)
T PRK14256 81 VSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEV-------KDRLKSNAMELSGGQ 153 (252)
T ss_pred HHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hHHhhCCcCcCCHHH
Confidence 5678889999999999884 999999865211 111 2233444444432222 123345667899999
Q ss_pred HHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchh
Q 001411 349 KQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVD 427 (1082)
Q Consensus 349 kqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 427 (1082)
|||++||||++.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 154 ~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14256 154 QQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKK 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999999877789999999999985 599999999999999999988
Q ss_pred hhhc
Q 001411 428 LISK 431 (1082)
Q Consensus 428 l~~~ 431 (1082)
+...
T Consensus 234 ~~~~ 237 (252)
T PRK14256 234 IFTT 237 (252)
T ss_pred HHhC
Confidence 8654
No 450
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-41 Score=327.93 Aligned_cols=219 Identities=27% Similarity=0.453 Sum_probs=181.9
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
+++.+++++|+. ...+++|+||+++.||+++|.|||||||||+|++|.+++.|++|.|++||.|... ++...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcce
Confidence 678999999975 3349999999999999999999999999999999999999999999999998754 46678899999
Q ss_pred EccCCCcChh-cHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCe
Q 001411 286 VSQEPALFAT-SIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKI 364 (1082)
Q Consensus 286 v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~i 364 (1082)
++-+.-|+.. |++|||.|...-....+..-.++.+.+ .+.| +++..+..+..++|-|+||||+|||||.+||++
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l---~k~l--~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i 154 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKARIAEL---SKRL--QLLEYLDRRVGEFSTGMKQKVAIARALVHDPSI 154 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHH---HHHh--ChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCe
Confidence 9987777766 999999875321111111112222222 2222 333344445568999999999999999999999
Q ss_pred eEEeCcccCCCHHHHHHHHHHHHHHcC-CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 365 LLLDEATSALDAESELIVQRALEKIMS-NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 365 lllDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
++||||||+||..+.+.+.+.+.+++. +++||+.||.++.++ -||+|+++.+|+++..|+.+++.++
T Consensus 155 ~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 155 LVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred EEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 999999999999999999999999876 899999999999998 5999999999999999999988765
No 451
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=3.6e-40 Score=361.33 Aligned_cols=212 Identities=27% Similarity=0.473 Sum_probs=181.1
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|+++.|++. .+|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 2 l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGGR--LIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECCE--EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 6899999999753 49999999999999999999999999999999999999999999999999988887778888999
Q ss_pred EccCCCc-ChhcHHHHHhcCCCCC-------C---HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 001411 286 VSQEPAL-FATSIANNILLGKEDA-------S---MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 354 (1082)
Q Consensus 286 v~Q~~~l-~~~ti~~ni~~g~~~~-------~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~l 354 (1082)
++|++.+ +..|++||+.++.... . .+++.++++..++ ..........||||||||++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrl~l 148 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTEL-----------SHLADRDMSTLSGGERQRVHV 148 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCc-----------HhhhcCCcccCCHHHHHHHHH
Confidence 9999864 4569999998763210 0 1123333333333 333445567899999999999
Q ss_pred HHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC-CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhh
Q 001411 355 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS-NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 355 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
|||++.+|+++||||||++||+.+...+.+.|.++.+ +.|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 149 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 149 ARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999998754 689999999999985 599999999999999999988764
No 452
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=4.6e-40 Score=362.02 Aligned_cols=229 Identities=28% Similarity=0.454 Sum_probs=187.7
Q ss_pred EEEEeEEEECCCC------CCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCH--
Q 001411 835 IELRNVSFKYPVR------PDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL-- 906 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~------~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~-- 906 (1082)
|+++||+++|+.. .+.++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++..++.
T Consensus 4 l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~ 83 (268)
T PRK10419 4 LNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQ 83 (268)
T ss_pred EEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhH
Confidence 8999999999631 03579999999999999999999999999999999999999999999999999988765
Q ss_pred -HHHhcceEEEcccCc--cc-cccHHHHhccCCC---CCCHHHHHHHHHHhcHHHHHhhCcccccc-cccCCCCCCChhH
Q 001411 907 -RSLRRKIGLVQQEPA--LF-STTIYENIKYGNE---DASEIELMKATKAANAHGFISRMPEGYQS-HVGDRGVQLSGGQ 978 (1082)
Q Consensus 907 -~~lR~~i~~VpQdp~--Lf-~gTIreNl~~~~~---~~~d~ei~~al~~a~l~~~i~~lp~gldt-~v~e~G~~LSgGQ 978 (1082)
..+|+.++|+||++. ++ ..|+++|+.+... ..+. ......+.+.+..+ |+++ ........|||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~-----~~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge 156 (268)
T PRK10419 84 RKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDK-----AERLARASEMLRAV--DLDDSVLDKRPPQLSGGQ 156 (268)
T ss_pred HHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCH-----HHHHHHHHHHHHHc--CCChhHhhCCCccCChHH
Confidence 357889999999983 44 4699999864211 1111 11122334444444 5553 3455677899999
Q ss_pred HHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecCh
Q 001411 979 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSH 1055 (1082)
Q Consensus 979 rQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~ 1055 (1082)
|||++|||||+++|+||||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|++
T Consensus 157 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~ 236 (268)
T PRK10419 157 LQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPV 236 (268)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCCh
Confidence 9999999999999999999999999999999999999998753 7899999999999975 999999999999999999
Q ss_pred HHHhhhccchHHHHHH
Q 001411 1056 EQLLRKENGIYKQLIR 1071 (1082)
Q Consensus 1056 ~eLl~~~~g~f~~l~~ 1071 (1082)
+++.. .++.|..-+.
T Consensus 237 ~~~~~-~~~~~~~~~~ 251 (268)
T PRK10419 237 GDKLT-FSSPAGRVLQ 251 (268)
T ss_pred hhccC-CCCHHHHHHH
Confidence 99986 4555554443
No 453
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=4.2e-40 Score=353.11 Aligned_cols=204 Identities=30% Similarity=0.492 Sum_probs=170.4
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHH---HHhhh
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK---WLREQ 282 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~~~ 282 (1082)
++++|++++|++. ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+++.
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 6899999999432 3599999999999999999999999999999999999999999999999998776543 36788
Q ss_pred ceEEccCCCcC-hhcHHHHHhcCCC--CCCHH----HHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 001411 283 MGLVSQEPALF-ATSIANNILLGKE--DASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 355 (1082)
Q Consensus 283 i~~v~Q~~~l~-~~ti~~ni~~g~~--~~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lA 355 (1082)
++|++|++.++ +.|++||+.++.. ..+.+ ++.++++..++.+ .......+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~la 149 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLD-----------KAKNFPIQLSGGEQQRVGIA 149 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhhCCchhCCHHHHHHHHHH
Confidence 99999999875 5699999987531 11222 2333334333333 23344568999999999999
Q ss_pred HhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEE
Q 001411 356 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVE 421 (1082)
Q Consensus 356 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~ 421 (1082)
||++.+|+++||||||++||+.+.+.+.+.|.++. ++.|+|++||+++.+.. ||+|++|++|+++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 150 RAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999999999874 46899999999999876 89999999999863
No 454
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=363.10 Aligned_cols=217 Identities=29% Similarity=0.501 Sum_probs=180.1
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC-----CCCcEEEECCeeCCCCC--HHH
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKSLQ--LKW 278 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~~~--~~~ 278 (1082)
-+++|++|+|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999974 349999999999999999999999999999999999986 47999999999886543 335
Q ss_pred HhhhceEEccCCCcChhcHHHHHhcCCC--CC--C----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 279 LREQMGLVSQEPALFATSIANNILLGKE--DA--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 279 ~~~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~--~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
+++.++|++|++.+|+.|++||+.++.. .. . .+++.++++..++.+. +.+.++..+.+|||||||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~Gq~q 156 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEE-------LGDRLKDSAFELSGGQQQ 156 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCch-------hhhHhhcChhhCCHHHHH
Confidence 6788999999999999999999987521 11 1 1223333343333221 122345667789999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++|||||+++|+++||||||++||+.+.+.+.+.|.++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 157 RLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999865 8999999999999999988876
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
..
T Consensus 237 ~~ 238 (251)
T PRK14244 237 KN 238 (251)
T ss_pred cC
Confidence 53
No 455
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-40 Score=363.97 Aligned_cols=218 Identities=30% Similarity=0.475 Sum_probs=182.4
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC-----CCCcEEEECCeeCCC--CCHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~~~ 277 (1082)
.++++|++++|++. .+|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+..
T Consensus 24 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 101 (271)
T PRK14238 24 VFDTQNLNLWYGED--HALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSVE 101 (271)
T ss_pred EEEEeeeEEEECCc--ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccHH
Confidence 59999999999743 49999999999999999999999999999999999987 699999999999853 3455
Q ss_pred HHhhhceEEccCCCcChhcHHHHHhcCCC--CCCHH-H----HHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 278 WLREQMGLVSQEPALFATSIANNILLGKE--DASMD-R----VIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~~~~-~----~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
.+++.++|++|++.+|..|++||+.++.. ....+ . +.++++..++ .+++.......+.+|||||||
T Consensus 102 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~l~~~~~~~~~~LSgGe~q 174 (271)
T PRK14238 102 ELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAI-------WDELKDRLHDNAYGLSGGQQQ 174 (271)
T ss_pred HHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCC-------cchHHHHHhcCcccCCHHHHH
Confidence 67888999999999998999999987532 11111 1 1222222211 113333456677899999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++|||||+.+|+++||||||++||+.+.+.+.+.|.++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 175 rv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 254 (271)
T PRK14238 175 RLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIF 254 (271)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988777999999999999764 8999999999999999998886
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
..
T Consensus 255 ~~ 256 (271)
T PRK14238 255 SN 256 (271)
T ss_pred cC
Confidence 54
No 456
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-40 Score=345.81 Aligned_cols=224 Identities=35% Similarity=0.595 Sum_probs=194.7
Q ss_pred cEEEEeEEEECCCCCCc---------------------ccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCcc
Q 001411 834 NIELRNVSFKYPVRPDI---------------------TIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISG 892 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~---------------------~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G 892 (1082)
.|+++||+.-|..++.. --++|+||+|+.||+.-|.|-||||||||++++.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 48889998877643221 137999999999999999999999999999999999999999
Q ss_pred EEEECCccCCCCCHHHHh----cceEEEcccCcccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHhhCcc
Q 001411 893 TVLIDGYDIRTLNLRSLR----RKIGLVQQEPALFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPE 961 (1082)
Q Consensus 893 ~I~idG~di~~i~~~~lR----~~i~~VpQdp~Lf~-gTIreNl~~~~~--~~~----d~ei~~al~~a~l~~~i~~lp~ 961 (1082)
+|++||.||..++.++|| +++++|+|.--||+ -||.+|..||.. ..+ .+...++++.+|+.+|-.+.|
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp- 162 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP- 162 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc-
Confidence 999999999999987764 57999999999997 599999999853 222 234567788999988877766
Q ss_pred cccccccCCCCCCChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhh-hcc
Q 001411 962 GYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTI-RNA 1038 (1082)
Q Consensus 962 gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti-~~~ 1038 (1082)
.+||||+|||+.|||||..+|+||+||||.|+|||--...+|+-|.++.+ .+|+++|||+|++. +-.
T Consensus 163 ----------~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 163 ----------NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred ----------ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 57999999999999999999999999999999999999999999987653 78999999999997 459
Q ss_pred CEEEEEeCCEEEEecChHHHhhhccchHHH
Q 001411 1039 DKIAVLQQGKVAEIGSHEQLLRKENGIYKQ 1068 (1082)
Q Consensus 1039 DrI~Vl~~G~ive~G~~~eLl~~~~g~f~~ 1068 (1082)
|||..|++|+|+..|||+|++.++..-|-+
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~ 262 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVR 262 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHH
Confidence 999999999999999999999877655543
No 457
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-40 Score=350.27 Aligned_cols=201 Identities=27% Similarity=0.502 Sum_probs=170.9
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
|+++|++++|++. . .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 1 i~~~~l~~~~~~~---~-~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ---P-MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE---e-cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 4789999999742 1 39999999999999999999999999999999999999999999999876554 3567999
Q ss_pred EccCCCcChh-cHHHHHhcCCCC------CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhc
Q 001411 286 VSQEPALFAT-SIANNILLGKED------ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 358 (1082)
Q Consensus 286 v~Q~~~l~~~-ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal 358 (1082)
++|++.+|+. |++||+.++... ...+++.++++..++.+...+. ..+||||||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ia~al 143 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRL-----------PGELSGGERQRVALARVL 143 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCC-----------cccCCHHHHHHHHHHHHH
Confidence 9999999976 999999876421 1123455566666655544443 358999999999999999
Q ss_pred ccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCcccccc-CCEEEEEeCCEEEEec
Q 001411 359 LRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 423 (1082)
Q Consensus 359 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g 423 (1082)
+.+|+++||||||++||++++..+.+.|+++. .++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999875 37899999999999865 8999999999998654
No 458
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-40 Score=360.43 Aligned_cols=218 Identities=28% Similarity=0.457 Sum_probs=183.1
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCCC--CHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSL--QLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~--~~~ 277 (1082)
.++++|+++.|++ ..+|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 5899999999974 3499999999999999999999999999999999999875 799999999998643 345
Q ss_pred HHhhhceEEccCCCcChhcHHHHHhcCCCCC---CH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 278 WLREQMGLVSQEPALFATSIANNILLGKEDA---SM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~---~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
.+++.++|++|++.+|+.|++||+.++.... +. +++.++++..++.+ ++..........|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~~q 154 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWD-------EVKDDLKKSALKLSGGQQQ 154 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCch-------hhhhHhhCCcccCCHHHHH
Confidence 6678899999999999999999998753211 11 22334444444322 2222345566789999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++||||++.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988767899999999998765 8999999999999999999886
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
..
T Consensus 235 ~~ 236 (251)
T PRK14270 235 LE 236 (251)
T ss_pred cC
Confidence 54
No 459
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=361.20 Aligned_cols=218 Identities=27% Similarity=0.442 Sum_probs=183.4
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCCC--CHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSL--QLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~--~~~ 277 (1082)
.|+++|++|+|+++ .+|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|+++... +..
T Consensus 6 ~i~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGEK--HALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECCe--eeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 48999999999743 499999999999999999999999999999999999763 489999999998765 445
Q ss_pred HHhhhceEEccCCCcChhcHHHHHhcCCCCC---CH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 278 WLREQMGLVSQEPALFATSIANNILLGKEDA---SM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~---~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
..++.++|++|++.+|+.|++||+.++.... .. +++.++++..++ .+++.+..+..+.+|||||||
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~l~~~~~~~~~~LS~G~~q 156 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAAL-------WDEVKDRLHDSALSLSGGQQQ 156 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcC-------chhhHHHhhcChhhCCHHHHH
Confidence 6678899999999999999999999863211 11 122333333322 223334466777899999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++||||++.+|+++||||||++||+.+.+.+.+.|.++.+++|+|++||+++.+. .||++++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 157 RLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHH
Confidence 99999999999999999999999999999999999998876789999999999986 58999999999999999998876
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
..
T Consensus 237 ~~ 238 (253)
T PRK14261 237 EN 238 (253)
T ss_pred hC
Confidence 43
No 460
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-40 Score=324.22 Aligned_cols=213 Identities=31% Similarity=0.520 Sum_probs=183.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
+++++++.+|++ ...+++||||+++.||.+||.|+|||||||++++|..++.|++|.|+|||+|+.+- +...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhcc
Confidence 688999999973 33489999999999999999999999999999999999999999999999999874 567899999
Q ss_pred EEcccCcccc-ccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHH
Q 001411 915 LVQQEPALFS-TTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 987 (1082)
Q Consensus 915 ~VpQdp~Lf~-gTIreNl~~~~~--~~~d----~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARA 987 (1082)
+++-+.-|+. -|.||||.|+.. +-++ .++.+.-+..++.+. +|..++ +||-|+|||++||||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~-------~~rRv~----~~S~G~kqkV~iARA 147 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEY-------LDRRVG----EFSTGMKQKVAIARA 147 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHH-------HHHHHh----hhchhhHHHHHHHHH
Confidence 9997777775 599999988532 2222 233344444455444 344554 599999999999999
Q ss_pred HccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHHHhhh
Q 001411 988 ILKNPSILLLDEATSALDTASENLIQEALDKLME-GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLRK 1061 (1082)
Q Consensus 988 lL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~eLl~~ 1061 (1082)
|+++|+|++||||||+||..+.+.+++-|++... +++||+-||-++.++ -||||+++.+|+++..|+++++.+.
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 9999999999999999999999999999998864 999999999999998 5999999999999999999999764
No 461
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-40 Score=361.06 Aligned_cols=222 Identities=24% Similarity=0.457 Sum_probs=183.4
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHH-hhhc
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL-REQM 283 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~i 283 (1082)
.++++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 4899999999974 349999999999999999999999999999999999999999999999999987765544 4569
Q ss_pred eEEccCCCcChh-cHHHHHhcCCCCCC----------HHHH--HHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 284 GLVSQEPALFAT-SIANNILLGKEDAS----------MDRV--IEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 284 ~~v~Q~~~l~~~-ti~~ni~~g~~~~~----------~~~~--~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
+|++|++.+|+. |++||+.++..... .... ........+.+.++.+ |++........+|||||||
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~q 160 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQR 160 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHHH
Confidence 999999999986 99999997632100 0000 0000011122334444 5666667778899999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVD 427 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~ 427 (1082)
|++|||||+.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 161 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 240 (255)
T PRK11300 161 RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEE 240 (255)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHH
Confidence 99999999999999999999999999999999999998753 6899999999999865 89999999999999999888
Q ss_pred hhh
Q 001411 428 LIS 430 (1082)
Q Consensus 428 l~~ 430 (1082)
+..
T Consensus 241 ~~~ 243 (255)
T PRK11300 241 IRN 243 (255)
T ss_pred Hhh
Confidence 754
No 462
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-40 Score=364.40 Aligned_cols=214 Identities=32% Similarity=0.550 Sum_probs=179.5
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCC--CCHHHHhhhc
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKS--LQLKWLREQM 283 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~--~~~~~~~~~i 283 (1082)
++++|++++|++. .++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...+++.|
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPDG-TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 6899999999732 349999999999999999999999999999999999999999999999999852 2345678899
Q ss_pred eEEccCC--CcChhcHHHHHhcCCCC--CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 001411 284 GLVSQEP--ALFATSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 355 (1082)
Q Consensus 284 ~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lA 355 (1082)
+|++|++ .+++.|+.||+.++... .+. +++.++++..++. ........+||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~-----------~~~~~~~~~LS~Gq~qrv~la 149 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGME-----------GFENKPPHHLSGGQKKRVAIA 149 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCc-----------hhhcCChhhCCHHHHHHHHHH
Confidence 9999997 57888999999875321 111 2233344444332 223344568999999999999
Q ss_pred HhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhhhc
Q 001411 356 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 356 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|||+.+|+++||||||++||+.+...+.+.|.++. +++|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 150 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 150 GILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999875 4789999999999886 5999999999999999999888653
No 463
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-40 Score=360.22 Aligned_cols=218 Identities=31% Similarity=0.515 Sum_probs=182.2
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCCC--CHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSL--QLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~--~~~ 277 (1082)
.|+++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999974 3499999999999999999999999999999999999984 899999999988653 334
Q ss_pred HHhhhceEEccCCCcChhcHHHHHhcCCCC---CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 278 WLREQMGLVSQEPALFATSIANNILLGKED---ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
.+++.++|++|++.+|+.|++||+.++... ... +++.++++..++.+.+ +...+....+|||||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~q 153 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEV-------KSELNKPGTRLSGGQQQ 153 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchh-------HHHHhCChhhcCHHHHH
Confidence 567889999999999999999999875311 111 1233344444332221 22345667899999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++|||||+.+|+++||||||++||+.+...+.+.|.++.+++|+|++||+++.+. .||++++|++|++++.|+++++.
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 99999999999999999999999999999999999998877789999999999765 59999999999999999998886
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
+.
T Consensus 234 ~~ 235 (250)
T PRK14262 234 ER 235 (250)
T ss_pred hC
Confidence 53
No 464
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=9.1e-40 Score=359.37 Aligned_cols=211 Identities=28% Similarity=0.454 Sum_probs=177.4
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCC---CcEEEECCeeCCCC-----CH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT---SGKILLDGHDLKSL-----QL 276 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~---~G~i~~~g~~~~~~-----~~ 276 (1082)
-++++|+++.|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +.
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 4899999999974 34999999999999999999999999999999999999986 49999999988643 23
Q ss_pred HHHhhhceEEccCCCcChh-cHHHHHhcCCCCC-----------C---HHHHHHHHHHhchHHHHhcCCCCccccccCCC
Q 001411 277 KWLREQMGLVSQEPALFAT-SIANNILLGKEDA-----------S---MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGG 341 (1082)
Q Consensus 277 ~~~~~~i~~v~Q~~~l~~~-ti~~ni~~g~~~~-----------~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g 341 (1082)
..+++.++|++|++.+|+. |++||+.++.... . .+++.++++..++ +.......
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~ 150 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGM-----------VHFAHQRV 150 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCC-----------HHHHhCCc
Confidence 5567889999999998875 9999998763211 0 1123333333333 33344556
Q ss_pred CCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc--CCCeEEEEccCccccc-cCCEEEEEeCCE
Q 001411 342 TQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVR-DVDTIMVLKNGQ 418 (1082)
Q Consensus 342 ~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~G~ 418 (1082)
.+||||||||++|||||+.+|++|||||||++||+++.+.+.+.|+++. +++|+|++||+++.+. .||+|++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~ 230 (262)
T PRK09984 151 STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGH 230 (262)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 6899999999999999999999999999999999999999999999875 3789999999999865 589999999999
Q ss_pred EEEecCchhh
Q 001411 419 VVESGTHVDL 428 (1082)
Q Consensus 419 i~~~g~~~~l 428 (1082)
+++.|+++++
T Consensus 231 i~~~g~~~~~ 240 (262)
T PRK09984 231 VFYDGSSQQF 240 (262)
T ss_pred EEEeCCHHHh
Confidence 9999999886
No 465
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.9e-40 Score=352.37 Aligned_cols=205 Identities=35% Similarity=0.563 Sum_probs=169.7
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCC--CCHHHHhhhc
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKS--LQLKWLREQM 283 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~--~~~~~~~~~i 283 (1082)
++++|++++|++ .++|+++||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...+++.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 468999999975 349999999999999999999999999999999999999999999999998853 3445678899
Q ss_pred eEEccCCCcCh-hcHHHHHhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcc
Q 001411 284 GLVSQEPALFA-TSIANNILLGKE---DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVL 359 (1082)
Q Consensus 284 ~~v~Q~~~l~~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~ 359 (1082)
+|++|++.+|+ .|++||+.++.. ....++..+. +.+.++.+ |++..+.....+||||||||++||||++
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~ 151 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEER-----ALELLEKV--GLADKADAYPAQLSGGQQQRVAIARALA 151 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHH-----HHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHHh
Confidence 99999999887 599999987532 1122211111 11223333 4444455556789999999999999999
Q ss_pred cCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC-CCeEEEEccCcccccc-CCEEEEEeCCEE
Q 001411 360 RNPKILLLDEATSALDAESELIVQRALEKIMS-NRTTIVVAHRLSTVRD-VDTIMVLKNGQV 419 (1082)
Q Consensus 360 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~vtH~~~~~~~-~d~i~~l~~G~i 419 (1082)
.+|+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++
T Consensus 152 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 152 MNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999998754 7899999999999865 999999999974
No 466
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=5.7e-40 Score=351.43 Aligned_cols=204 Identities=31% Similarity=0.468 Sum_probs=173.3
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHH---HHh
Q 001411 835 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SLR 910 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR 910 (1082)
++++||+++|+... ..++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996321 25699999999999999999999999999999999999999999999999999877643 468
Q ss_pred cceEEEcccCcccc-ccHHHHhccCCC---CCCHH----HHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHH
Q 001411 911 RKIGLVQQEPALFS-TTIYENIKYGNE---DASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 982 (1082)
Q Consensus 911 ~~i~~VpQdp~Lf~-gTIreNl~~~~~---~~~d~----ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 982 (1082)
+.++|+||+|.+|. .|+.+|+.++.. ..+.+ .+.++++..++.+++. ....+||+|||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLD-----------YYPHNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhh-----------cChhhCCHHHHHHH
Confidence 89999999999997 699999986431 12222 3444455555544433 34467999999999
Q ss_pred HHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhccCEEEEEeCCEE
Q 001411 983 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKV 1049 (1082)
Q Consensus 983 aLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~i 1049 (1082)
+||||++++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999999999998763 7999999999997777999999999986
No 467
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-40 Score=367.69 Aligned_cols=223 Identities=27% Similarity=0.453 Sum_probs=182.3
Q ss_pred cEEEEEEEEECCCC--------CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCH
Q 001411 205 QIEFSEVCFAYPSR--------PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL 276 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~--------~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~ 276 (1082)
-|+++|+++.|+.. ...+|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 48999999999631 2359999999999999999999999999999999999999999999999999987764
Q ss_pred H---HHhhhceEEccCCC--cChh-cHHHHHhcCC---CCCC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCC
Q 001411 277 K---WLREQMGLVSQEPA--LFAT-SIANNILLGK---EDAS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQ 343 (1082)
Q Consensus 277 ~---~~~~~i~~v~Q~~~--l~~~-ti~~ni~~g~---~~~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~ 343 (1082)
. .+|++|+||+|+|. +++. |+.+|+..+. .... .+++.++++..++.+ . .......+
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~----~~~~~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------E----HYDRYPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------H----HhcCCCcc
Confidence 3 46778999999983 5554 8998886321 1111 223444444444421 1 12334568
Q ss_pred CChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEE
Q 001411 344 LSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVV 420 (1082)
Q Consensus 344 LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~ 420 (1082)
||||||||++|||||+.+|++||+||||++||..++..+.+.|.++.+ +.|+|+|||+++.+.. ||+|++|++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 7899999999999975 9999999999999
Q ss_pred EecCchhhhhcC-chhHH
Q 001411 421 ESGTHVDLISKG-GEYAA 437 (1082)
Q Consensus 421 ~~g~~~~l~~~~-~~~~~ 437 (1082)
+.|+.+++.++. ..|.+
T Consensus 235 e~g~~~~~~~~p~hpyt~ 252 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQ 252 (327)
T ss_pred EECCHHHHhcCCCCHHHH
Confidence 999999998753 23443
No 468
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-40 Score=374.51 Aligned_cols=211 Identities=27% Similarity=0.425 Sum_probs=179.5
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCC----CHHHHhh
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL----QLKWLRE 281 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~----~~~~~~~ 281 (1082)
|++ |++++|++. .+ |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +....++
T Consensus 2 l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 566 899999642 23 89999999999999999999999999999999999999999999988642 2344577
Q ss_pred hceEEccCCCcChh-cHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhccc
Q 001411 282 QMGLVSQEPALFAT-SIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLR 360 (1082)
Q Consensus 282 ~i~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~ 360 (1082)
.++||+|++.+|+. |++||+.++......+++.+.++..++.+.. .....+||||||||++|||||+.
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLL-----------DRYPGSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhh-----------hCCcccCCHHHHHHHHHHHHHHc
Confidence 89999999999975 9999999875433344555555555544333 34456899999999999999999
Q ss_pred CCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhcC
Q 001411 361 NPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 432 (1082)
Q Consensus 361 ~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 432 (1082)
+|+++||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..+.
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p 220 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASS 220 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCc
Confidence 9999999999999999999999999988753 6899999999998754 8999999999999999999997653
No 469
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-40 Score=350.97 Aligned_cols=205 Identities=25% Similarity=0.511 Sum_probs=169.3
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|+++.|++ ..+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+++.++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 478999999974 349999999999999999999999999999999999999999999999987753 45678999
Q ss_pred EccCCCcChh-cHHHHHhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCC
Q 001411 286 VSQEPALFAT-SIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 362 (1082)
Q Consensus 286 v~Q~~~l~~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~ 362 (1082)
++|++.+++. |++||+.++... ....+..+ .+.+.++.+ |++........+||||||||++||||++.+|
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 147 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEARR-----RIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHDP 147 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHHHH-----HHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcCC
Confidence 9999998875 999999864211 11111111 112233333 4444445566789999999999999999999
Q ss_pred CeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEec
Q 001411 363 KILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 423 (1082)
Q Consensus 363 ~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g 423 (1082)
+++||||||++||+.+.+.+.+.++++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 148 ~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 148 ELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 9999999999999999999999998875 46899999999998864 8999999999998754
No 470
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-39 Score=352.50 Aligned_cols=209 Identities=30% Similarity=0.535 Sum_probs=178.9
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|++++|++. ..|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ++.++|
T Consensus 2 l~~~~l~~~~~~~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~--~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHHL----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPS--RRPVSM 75 (232)
T ss_pred eEEEEEEEEECCc----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChh--hccEEE
Confidence 6899999999742 2499999999999999999999999999999999999999999999998765442 467999
Q ss_pred EccCCCcChh-cHHHHHhcCCC-C-----CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhc
Q 001411 286 VSQEPALFAT-SIANNILLGKE-D-----ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 358 (1082)
Q Consensus 286 v~Q~~~l~~~-ti~~ni~~g~~-~-----~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal 358 (1082)
++|++.+|++ |+.||+.++.. . ...+++.++++..++.+.+++.| ..||||||||++||||+
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral 144 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARCL 144 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999986 99999987531 1 11234556666666655554444 48999999999999999
Q ss_pred ccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhc
Q 001411 359 LRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 359 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
+++|+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999998743 7899999999999865 899999999999999999888754
No 471
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=6.1e-40 Score=352.12 Aligned_cols=205 Identities=28% Similarity=0.461 Sum_probs=177.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
++++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ++.++
T Consensus 1 l~l~~v~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~ 73 (223)
T TIGR03740 1 LETKNLSKRFG---KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIG 73 (223)
T ss_pred CEEEeEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEE
Confidence 47899999996 346999999999999999999999999999999999999999999999999875422 35799
Q ss_pred EEcccCcccc-ccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccC
Q 001411 915 LVQQEPALFS-TTIYENIKYGNE--DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 991 (1082)
Q Consensus 915 ~VpQdp~Lf~-gTIreNl~~~~~--~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~ 991 (1082)
|+||++.+|. .|+++|+.++.. ..+++++.++++..++.+...+ ...+||||||||++||||++++
T Consensus 74 ~~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~~rv~laral~~~ 142 (223)
T TIGR03740 74 SLIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGKK-----------KAKQFSLGMKQRLGIAIALLNH 142 (223)
T ss_pred EEcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHhh-----------hHhhCCHHHHHHHHHHHHHhcC
Confidence 9999999886 699999975321 2245567777777777654332 3357999999999999999999
Q ss_pred CCEEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-ccCEEEEEeCCEEEEecChHH
Q 001411 992 PSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQ 1057 (1082)
Q Consensus 992 ~~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~G~~~e 1057 (1082)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|++.+
T Consensus 143 p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 143 PKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 99999999999999999999999999875 4789999999999986 499999999999999999875
No 472
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-40 Score=368.03 Aligned_cols=219 Identities=26% Similarity=0.418 Sum_probs=177.6
Q ss_pred cEEEEEEEEECCCCC--CccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC----CCCcEEEECCeeCCCCCHHH
Q 001411 205 QIEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE----PTSGKILLDGHDLKSLQLKW 278 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~--~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~----~~~G~i~~~g~~~~~~~~~~ 278 (1082)
-++++|+++.|+... ..+|+||||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++..++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 379999999997532 249999999999999999999999999999999999997 48999999999998887665
Q ss_pred Hhh----hceEEccCCC--cChh-cHHHHHh----cCCCCC---CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCC
Q 001411 279 LRE----QMGLVSQEPA--LFAT-SIANNIL----LGKEDA---SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQL 344 (1082)
Q Consensus 279 ~~~----~i~~v~Q~~~--l~~~-ti~~ni~----~g~~~~---~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~L 344 (1082)
+++ .|+||+|+|. +.+. |+.+++. ...... ..+++.++++..++.+. ....+....+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~--------~~~l~~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDP--------ASRLDVYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------HHHHhCCchhC
Confidence 543 6999999985 4432 6655543 211111 12234444444443211 12345566799
Q ss_pred ChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEE
Q 001411 345 SGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVE 421 (1082)
Q Consensus 345 SgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~ 421 (1082)
||||||||+|||||+.+|++||+||||++||+.++..+.+.|+++.+ +.|+|+|||+++.+. .||+|++|++|+|++
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998853 789999999999985 599999999999999
Q ss_pred ecCchhhhhc
Q 001411 422 SGTHVDLISK 431 (1082)
Q Consensus 422 ~g~~~~l~~~ 431 (1082)
.|+++++.++
T Consensus 235 ~g~~~~~~~~ 244 (326)
T PRK11022 235 TGKAHDIFRA 244 (326)
T ss_pred ECCHHHHhhC
Confidence 9999999875
No 473
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-40 Score=360.14 Aligned_cols=219 Identities=32% Similarity=0.479 Sum_probs=183.6
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCC--CCH
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKS--LQL 276 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~~ 276 (1082)
..++++|++++|++ ..+|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 36999999999974 3499999999999999999999999999999999999985 48999999998854 345
Q ss_pred HHHhhhceEEccCCCcChhcHHHHHhcCCCC---CC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHH
Q 001411 277 KWLREQMGLVSQEPALFATSIANNILLGKED---AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQK 349 (1082)
Q Consensus 277 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqk 349 (1082)
..+++.++|++|++.+|+.|++||+.++... .. .+.+.++++..++.+++. ......+..||||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVK-------DKLNKSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhh-------hHhcCCcccCCHHHH
Confidence 5678899999999999999999999875311 11 123344555554433222 234456678999999
Q ss_pred HHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEe-----CCEEEEec
Q 001411 350 QRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLK-----NGQVVESG 423 (1082)
Q Consensus 350 qri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~-----~G~i~~~g 423 (1082)
||++|||||+++|+++||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999988777899999999999865 89999997 59999999
Q ss_pred Cchhhhhc
Q 001411 424 THVDLISK 431 (1082)
Q Consensus 424 ~~~~l~~~ 431 (1082)
+++++.+.
T Consensus 237 ~~~~~~~~ 244 (259)
T PRK14260 237 VTTQIFSN 244 (259)
T ss_pred CHHHHhcC
Confidence 99988643
No 474
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=4.7e-40 Score=370.10 Aligned_cols=228 Identities=26% Similarity=0.429 Sum_probs=182.6
Q ss_pred cEEEEEEEEECCCC--CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCC---CcEEEECCeeCCCCCHHHH
Q 001411 205 QIEFSEVCFAYPSR--PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT---SGKILLDGHDLKSLQLKWL 279 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~ 279 (1082)
-++++|+++.|+.. ...+++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++..++..++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 58999999999632 234999999999999999999999999999999999999996 9999999999988876655
Q ss_pred h----hhceEEccCC--CcChh-cHHHHHhcCC---CCCCHHHH-HHHHHHhchHHHHhcCCCCccccccCCCCCCChHH
Q 001411 280 R----EQMGLVSQEP--ALFAT-SIANNILLGK---EDASMDRV-IEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQ 348 (1082)
Q Consensus 280 ~----~~i~~v~Q~~--~l~~~-ti~~ni~~g~---~~~~~~~~-~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGq 348 (1082)
+ +.|+||+|+| .+++. |+.+|+.... ...+.++. ..+.+.. +. ..+|++. ..++..+.+|||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L---~~-vgL~~~~-~~~~~~p~~LSgG~ 166 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRML---DA-VKMPEAR-KRMKMYPHEFSGGM 166 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHH---HH-cCCCChH-HHhcCCcccCCHHH
Confidence 3 4799999998 45543 7777775321 11122221 1111111 11 2344433 23567778999999
Q ss_pred HHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecCc
Q 001411 349 KQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTH 425 (1082)
Q Consensus 349 kqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~ 425 (1082)
|||++|||||+.+|+++|+|||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+. .||+|++|++|+|++.|++
T Consensus 167 ~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~ 246 (330)
T PRK09473 167 RQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNA 246 (330)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999998854 789999999999986 4899999999999999999
Q ss_pred hhhhhcC-chhHH
Q 001411 426 VDLISKG-GEYAA 437 (1082)
Q Consensus 426 ~~l~~~~-~~~~~ 437 (1082)
+++.+.. ..|.+
T Consensus 247 ~~i~~~p~~pyt~ 259 (330)
T PRK09473 247 RDVFYQPSHPYSI 259 (330)
T ss_pred HHHHhCCCCHHHH
Confidence 9998753 34544
No 475
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-40 Score=362.02 Aligned_cols=219 Identities=28% Similarity=0.485 Sum_probs=182.2
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC-----CCCcEEEECCeeCCC--CCH
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQL 276 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 276 (1082)
..|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 38 ~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 35999999999975 349999999999999999999999999999999999997 689999999999854 345
Q ss_pred HHHhhhceEEccCCCcChhcHHHHHhcCCCC--C---CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHH
Q 001411 277 KWLREQMGLVSQEPALFATSIANNILLGKED--A---SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 351 (1082)
Q Consensus 277 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~---~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqr 351 (1082)
..+++.++|++|++.+|+.|++||+.++... . ..+++.++++..++...+ ....+....+||||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LSgGe~qr 188 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEV-------KDQLDSSGLDLSGGQQQR 188 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchh-------HHHHhCCcccCCHHHHHH
Confidence 5678899999999999988999999875221 1 122344444444332111 123456677999999999
Q ss_pred HHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEE-EEeCCEEEEecCchhhh
Q 001411 352 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIM-VLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 352 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~-~l~~G~i~~~g~~~~l~ 429 (1082)
++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+++ +|++|++++.|+++++.
T Consensus 189 v~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~ 268 (285)
T PRK14254 189 LCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIF 268 (285)
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999998767899999999999865 89975 57999999999988876
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
.+
T Consensus 269 ~~ 270 (285)
T PRK14254 269 EN 270 (285)
T ss_pred hC
Confidence 43
No 476
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.6e-40 Score=362.88 Aligned_cols=214 Identities=30% Similarity=0.537 Sum_probs=184.1
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhce
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 284 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 284 (1082)
.++++|++++|++ ...+|+||||++++||++|++||||||||||+|+|+|++.|++|+|.++|.+...- ....+++||
T Consensus 4 ~i~~~~l~k~~~~-~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG-DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC-CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 4788999999973 23499999999999999999999999999999999999999999999999988655 677889999
Q ss_pred EEccCCCcChh-cHHHHHhcCC-----CC-CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHh
Q 001411 285 LVSQEPALFAT-SIANNILLGK-----ED-ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 357 (1082)
Q Consensus 285 ~v~Q~~~l~~~-ti~~ni~~g~-----~~-~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARa 357 (1082)
|+||+|.+++. |++||+.|.. +. ...+++.+.++..++.+. -......||+|||||++||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDK-----------ANKKVRTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchh-----------hCcchhhcCHHHHHHHHHHHH
Confidence 99999998877 9999998742 21 123456666666554331 134456899999999999999
Q ss_pred cccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC-C-CeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhc
Q 001411 358 VLRNPKILLLDEATSALDAESELIVQRALEKIMS-N-RTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 358 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~-~-~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|+.+|++|||||||++||+.+...+.+.|+++.+ + +||+++||.++.+.. ||+|++|++|+++..|+.+++...
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999999865 4 699999999999876 999999999999999998887543
No 477
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=1.3e-39 Score=356.70 Aligned_cols=226 Identities=28% Similarity=0.431 Sum_probs=183.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcc-----CCCCCHHH
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYD-----IRTLNLRS 908 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~d-----i~~i~~~~ 908 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +..++...
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (253)
T TIGR02323 3 LLQVSGLSKSYG---GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAE 79 (253)
T ss_pred eEEEeeeEEEeC---CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHH
Confidence 489999999996 3468999999999999999999999999999999999999999999999988 77766543
Q ss_pred ----HhcceEEEcccCc--c-ccccHHHHhccC---CCCCCHHHHHHHHHHhcHHHHHhhCccccc-ccccCCCCCCChh
Q 001411 909 ----LRRKIGLVQQEPA--L-FSTTIYENIKYG---NEDASEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQLSGG 977 (1082)
Q Consensus 909 ----lR~~i~~VpQdp~--L-f~gTIreNl~~~---~~~~~d~ei~~al~~a~l~~~i~~lp~gld-t~v~e~G~~LSgG 977 (1082)
+++.++|++|+|. + +..|+.+|+... .......+. ...+.++++.+ |++ +........||||
T Consensus 80 ~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~LSgG 152 (253)
T TIGR02323 80 RRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNI-----RAAAHDWLEEV--EIDPTRIDDLPRAFSGG 152 (253)
T ss_pred HHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHH-----HHHHHHHHHHc--CCChhhhhcCchhcCHH
Confidence 3467999999985 2 345888887531 000011111 12334455554 343 3455567789999
Q ss_pred HHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecC
Q 001411 978 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGS 1054 (1082)
Q Consensus 978 QrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~ 1054 (1082)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 153 ~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~ 232 (253)
T TIGR02323 153 MQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGL 232 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999998643 7899999999999975 99999999999999999
Q ss_pred hHHHhhhccchHHHH
Q 001411 1055 HEQLLRKENGIYKQL 1069 (1082)
Q Consensus 1055 ~~eLl~~~~g~f~~l 1069 (1082)
++++..++...|.++
T Consensus 233 ~~~~~~~~~~~~~~~ 247 (253)
T TIGR02323 233 TDQVLDDPQHPYTQL 247 (253)
T ss_pred HHHHhcCCCCHHHHH
Confidence 999986544455544
No 478
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-40 Score=344.38 Aligned_cols=191 Identities=25% Similarity=0.382 Sum_probs=163.7
Q ss_pred cEEEEeEEEECCCC-CCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc---CCccEEEECCccCCCCCHHHH
Q 001411 834 NIELRNVSFKYPVR-PDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD---PISGTVLIDGYDIRTLNLRSL 909 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~-~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~l 909 (1082)
.+.++||+|.|+.. .+.++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 37899999999843 35679999999999999999999999999999999999999 89999999999988765 457
Q ss_pred hcceEEEcccCcccc-ccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHH
Q 001411 910 RRKIGLVQQEPALFS-TTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAI 988 (1082)
Q Consensus 910 R~~i~~VpQdp~Lf~-gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAl 988 (1082)
|++++|+||++.+|. .|+++|+.++.. . . .+ +....||+|||||++|||||
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~------~----~--------------~~----~~~~~LS~Ge~qrl~laral 133 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALR------C----K--------------GN----EFVRGISGGERKRVSIAEAL 133 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhh------h----c--------------cc----cchhhCCHHHHHHHHHHHHH
Confidence 889999999998887 499999986321 0 0 12 23357999999999999999
Q ss_pred ccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEec-Cchhhh-ccCEEEEEeCCEEEEec
Q 001411 989 LKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAH-RLSTIR-NADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 989 L~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaH-rl~ti~-~~DrI~Vl~~G~ive~G 1053 (1082)
+++|++|||||||++||+++.+.+.+.|++..+ ++|+|+++| +++.+. .||+|++|++|++++.|
T Consensus 134 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 134 VSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 999999999999999999999999999998754 567666655 556764 59999999999999865
No 479
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=358.18 Aligned_cols=221 Identities=24% Similarity=0.404 Sum_probs=182.2
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCC--------CcEEEECCeeCCCCCHH
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT--------SGKILLDGHDLKSLQLK 277 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~--------~G~i~~~g~~~~~~~~~ 277 (1082)
++++|++++|+++ .+|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++...+..
T Consensus 2 l~~~nl~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRHR--AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECCE--eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 6899999999753 4999999999999999999999999999999999999998 99999999999877777
Q ss_pred HHhhhceEEccCCC-cChhcHHHHHhcCCCCC-CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 001411 278 WLREQMGLVSQEPA-LFATSIANNILLGKEDA-SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 355 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~-l~~~ti~~ni~~g~~~~-~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lA 355 (1082)
.+++.++|++|++. +|..|++||+.++.... .............+.+.++.+ |+++..+....+||||||||++||
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 157 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA--GATALVGRDVTTLSGGELARVQFA 157 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHH
Confidence 78888999999986 56779999998763210 000000000001112223333 555666777789999999999999
Q ss_pred Hhcc---------cCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEec
Q 001411 356 RAVL---------RNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESG 423 (1082)
Q Consensus 356 Ral~---------~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g 423 (1082)
|||+ .+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|+|||+++.+. .||++++|++|++++.|
T Consensus 158 ral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~g 237 (272)
T PRK13547 158 RVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAHG 237 (272)
T ss_pred HHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEec
Confidence 9999 59999999999999999999999999998753 689999999999986 59999999999999999
Q ss_pred Cchhhhh
Q 001411 424 THVDLIS 430 (1082)
Q Consensus 424 ~~~~l~~ 430 (1082)
+++++..
T Consensus 238 ~~~~~~~ 244 (272)
T PRK13547 238 APADVLT 244 (272)
T ss_pred CHHHHcC
Confidence 9988865
No 480
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-40 Score=336.47 Aligned_cols=170 Identities=38% Similarity=0.689 Sum_probs=158.0
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
++++||+++|+. .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 76 (173)
T cd03230 1 IEVRNLSKRYGK---KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIG 76 (173)
T ss_pred CEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEE
Confidence 478999999962 36999999999999999999999999999999999999999999999999988765 67789999
Q ss_pred EEcccCccccc-cHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCC
Q 001411 915 LVQQEPALFST-TIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPS 993 (1082)
Q Consensus 915 ~VpQdp~Lf~g-TIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~ 993 (1082)
|+||+|.+|.+ |+++|+. ||||||||++|||||+++|+
T Consensus 77 ~~~q~~~~~~~~tv~~~~~-----------------------------------------LS~G~~qrv~laral~~~p~ 115 (173)
T cd03230 77 YLPEEPSLYENLTVRENLK-----------------------------------------LSGGMKQRLALAQALLHDPE 115 (173)
T ss_pred EEecCCccccCCcHHHHhh-----------------------------------------cCHHHHHHHHHHHHHHcCCC
Confidence 99999999886 9999974 99999999999999999999
Q ss_pred EEEeeCCCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-ccCEEEEEeCCEE
Q 001411 994 ILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-NADKIAVLQQGKV 1049 (1082)
Q Consensus 994 ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~i 1049 (1082)
+|||||||++||+.+.+.+.+.|++.. ++.|+|++||+.+.+. .||+|++|++|++
T Consensus 116 illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 116 LLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 999999999999999999999999875 4689999999999987 4999999999974
No 481
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-40 Score=348.10 Aligned_cols=229 Identities=29% Similarity=0.521 Sum_probs=185.1
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-C----CccEEEECCccCCCCCHHH
Q 001411 835 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-P----ISGTVLIDGYDIRTLNLRS 908 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-p----~~G~I~idG~di~~i~~~~ 908 (1082)
++++|++.+|.... ...+++||||+|++||++||||.|||||||+.++++|+.+ | .+|+|.++|.|+-+++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 57899999997432 2479999999999999999999999999999999999997 3 5799999999999999875
Q ss_pred Hh----cceEEEcccCcc-cc--ccHHHHh----ccCCCCCC----HHHHHHHHHHhcHHHHHhhCcccccccccCCCCC
Q 001411 909 LR----RKIGLVQQEPAL-FS--TTIYENI----KYGNEDAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQ 973 (1082)
Q Consensus 909 lR----~~i~~VpQdp~L-f~--gTIreNl----~~~~~~~~----d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~ 973 (1082)
+| +.|++|||||.- |+ -||.+-+ ..-....+ .+...+.++.+++.+-- ..+..-..+
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~--------~~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPE--------RRLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHH--------HHHhhCCcc
Confidence 43 479999999851 22 1333332 22010001 23455666777665321 112233468
Q ss_pred CChhHHHHHHHHHHHccCCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEE
Q 001411 974 LSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVA 1050 (1082)
Q Consensus 974 LSgGQrQrlaLARAlL~~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv 1050 (1082)
||||||||+.||-||+.+|++||-||||++||..+.++|.+.|++..+ +.|+|+|||++..+.. ||||+||..|+||
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 999999999999999999999999999999999999999999998864 8899999999999865 9999999999999
Q ss_pred EecChHHHhhhccchHHHHHH
Q 001411 1051 EIGSHEQLLRKENGIYKQLIR 1071 (1082)
Q Consensus 1051 e~G~~~eLl~~~~g~f~~l~~ 1071 (1082)
|.|+.+++++++...|.+.+-
T Consensus 234 E~g~~~~i~~~P~HPYT~~Ll 254 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGLL 254 (316)
T ss_pred EeCCHHHHhcCCCChHHHHHH
Confidence 999999999988888877653
No 482
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.4e-39 Score=358.16 Aligned_cols=226 Identities=26% Similarity=0.436 Sum_probs=182.9
Q ss_pred cEEEEEEEEECCCC-------CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHH
Q 001411 205 QIEFSEVCFAYPSR-------PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~-------~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~ 277 (1082)
.|+++|++++|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 23599999999999999999999999999999999999999999999999998755555
Q ss_pred HHhhhceEEccCCC--cChh-cHHHHHhcCCC---CCC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChH
Q 001411 278 WLREQMGLVSQEPA--LFAT-SIANNILLGKE---DAS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGG 347 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~--l~~~-ti~~ni~~g~~---~~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgG 347 (1082)
..++.++|++|++. +++. |+.+|+.++.. ... .+++.++++..++.+. .......+||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LS~G 153 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPD----------HASYYPHMLAPG 153 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChH----------HHhcCchhcCHH
Confidence 66678999999985 4444 89999875321 111 1234444555444211 112334589999
Q ss_pred HHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecC
Q 001411 348 QKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGT 424 (1082)
Q Consensus 348 qkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~ 424 (1082)
||||++|||||+.+|+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 154 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 233 (267)
T PRK15112 154 QKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGS 233 (267)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCC
Confidence 99999999999999999999999999999999999999998753 7899999999999876 89999999999999999
Q ss_pred chhhhhcC--chhHHHHH
Q 001411 425 HVDLISKG--GEYAALVN 440 (1082)
Q Consensus 425 ~~~l~~~~--~~~~~~~~ 440 (1082)
++++.... ..+..++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~ 251 (267)
T PRK15112 234 TADVLASPLHELTKRLIA 251 (267)
T ss_pred HHHHhcCCCCHHHHHHHH
Confidence 99987653 33445554
No 483
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-40 Score=359.14 Aligned_cols=218 Identities=32% Similarity=0.528 Sum_probs=180.9
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCC--CCHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKS--LQLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~~~ 277 (1082)
.++++|++++|++. .+|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+..
T Consensus 4 ~l~i~~v~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGSF--HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECCE--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 48999999999753 499999999999999999999999999999999999974 79999999998853 3455
Q ss_pred HHhhhceEEccCCCcChh-cHHHHHhcCCCC---CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHH
Q 001411 278 WLREQMGLVSQEPALFAT-SIANNILLGKED---ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQK 349 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~-ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqk 349 (1082)
.+++.++|++|++.+|+. |++||+.++... ... +++.++++..++.+. ..........+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~G~~ 154 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNE-------VKDRLDKPGGGLSGGQQ 154 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchh-------hhhHhhCCcccCCHHHH
Confidence 678889999999998875 999999865311 111 223333433333211 12334556678999999
Q ss_pred HHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEe------CCEEEEe
Q 001411 350 QRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLK------NGQVVES 422 (1082)
Q Consensus 350 qri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~------~G~i~~~ 422 (1082)
||++|||||+.+|+++||||||++||+.+...+.+.|.++.+++|+|++||+++.+. .||+|++|+ +|++++.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 999999999999999999999999999999999999998876789999999999875 589999997 8999999
Q ss_pred cCchhhhhc
Q 001411 423 GTHVDLISK 431 (1082)
Q Consensus 423 g~~~~l~~~ 431 (1082)
|+++++...
T Consensus 235 ~~~~~~~~~ 243 (258)
T PRK14241 235 DDTEKIFSN 243 (258)
T ss_pred CCHHHHHhC
Confidence 999888653
No 484
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.2e-39 Score=352.77 Aligned_cols=210 Identities=34% Similarity=0.522 Sum_probs=177.6
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|++++|+++ ++|+|+||++.+||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 1 i~i~~l~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGSF--QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECCe--eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 4789999999753 49999999999999999999999999999999999999999999999999876543 4678999
Q ss_pred EccCCCcChh-cHHHHHhcCCCCC--C----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhc
Q 001411 286 VSQEPALFAT-SIANNILLGKEDA--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 358 (1082)
Q Consensus 286 v~Q~~~l~~~-ti~~ni~~g~~~~--~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal 358 (1082)
++|++.+|++ |++||+.++.... + .+++.++++..++ .........+|||||+||++|||||
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~lS~G~~qrl~laral 145 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQL-----------EGLGDRYPNQLSGGQRQRVALARAL 145 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCC-----------HhHhhCChhhCCHHHHHHHHHHHHH
Confidence 9999999976 9999998764321 1 1222333333333 2233444568999999999999999
Q ss_pred ccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhh
Q 001411 359 LRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 359 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
+++|+++||||||++||+++++.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 146 ~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 220 (237)
T TIGR00968 146 AVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYD 220 (237)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHc
Confidence 999999999999999999999999999998754 6899999999998765 89999999999999999888864
No 485
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-40 Score=354.28 Aligned_cols=210 Identities=33% Similarity=0.541 Sum_probs=178.5
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
|+++|++++|++. .+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+. .++.++|
T Consensus 1 l~~~~l~~~~~~~--~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGGF--VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCCe--eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 4689999999753 49999999999999999999999999999999999999999999999999876554 2578999
Q ss_pred EccCCCcChh-cHHHHHhcCCCC--CC----HHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhc
Q 001411 286 VSQEPALFAT-SIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 358 (1082)
Q Consensus 286 v~Q~~~l~~~-ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal 358 (1082)
++|++.+|.+ |++||+.++... .+ .+++.++++..++.+.+ .....+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~lS~G~~qrl~laral 145 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYA-----------NRKPSQLSGGQQQRVAIARAL 145 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHHHH
Confidence 9999999876 999999865321 11 22344444444444433 344468999999999999999
Q ss_pred ccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhh
Q 001411 359 LRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 430 (1082)
Q Consensus 359 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 430 (1082)
+.+|+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~ 220 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYE 220 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHh
Confidence 999999999999999999999999999998753 7899999999998764 89999999999999998887764
No 486
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-39 Score=357.49 Aligned_cols=219 Identities=30% Similarity=0.453 Sum_probs=183.3
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCC--CCH
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKS--LQL 276 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~~ 276 (1082)
..|+++|++++|++. .+|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~~--~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 19 SVFEVEGVKVFYGGF--LALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred ceEEEeeEEEEeCCe--EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 369999999999753 499999999999999999999999999999999999863 69999999998864 334
Q ss_pred HHHhhhceEEccCCCcChhcHHHHHhcCCCCC-----CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHH
Q 001411 277 KWLREQMGLVSQEPALFATSIANNILLGKEDA-----SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 351 (1082)
Q Consensus 277 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~-----~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqr 351 (1082)
..+++.|+|++|++.+|+.|+.||+.++.... ..+.+.++++.+++.+.+ .......+..||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEV-------KDKLKEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhh-------HHHhcCCcccCCHHHHHH
Confidence 56788999999999999889999998763211 112233444444443222 223445667899999999
Q ss_pred HHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEe---------CCEEEE
Q 001411 352 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLK---------NGQVVE 421 (1082)
Q Consensus 352 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~---------~G~i~~ 421 (1082)
++|||||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+. .||++++|+ +|++++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~ 249 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE 249 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 9999999999999999999999999999999999999877789999999999886 489999997 899999
Q ss_pred ecCchhhhhc
Q 001411 422 SGTHVDLISK 431 (1082)
Q Consensus 422 ~g~~~~l~~~ 431 (1082)
.|+++++...
T Consensus 250 ~g~~~~~~~~ 259 (274)
T PRK14265 250 FSPTEQMFGS 259 (274)
T ss_pred eCCHHHHHhC
Confidence 9999988654
No 487
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.9e-40 Score=337.45 Aligned_cols=172 Identities=47% Similarity=0.748 Sum_probs=159.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCC--HHHHhcc
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN--LRSLRRK 912 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--~~~lR~~ 912 (1082)
|+++|++++|+ +.++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+++ ...+++.
T Consensus 1 i~~~~l~~~~~---~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (178)
T cd03229 1 LELKNVSKRYG---QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRR 77 (178)
T ss_pred CEEEEEEEEEC---CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhc
Confidence 57899999996 346999999999999999999999999999999999999999999999999998876 5678899
Q ss_pred eEEEcccCcccc-ccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccC
Q 001411 913 IGLVQQEPALFS-TTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 991 (1082)
Q Consensus 913 i~~VpQdp~Lf~-gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~ 991 (1082)
++|+||+|.+|. .|+++|+.+. ||||||||++||||++++
T Consensus 78 i~~~~q~~~~~~~~t~~~~l~~~---------------------------------------lS~G~~qr~~la~al~~~ 118 (178)
T cd03229 78 IGMVFQDFALFPHLTVLENIALG---------------------------------------LSGGQQQRVALARALAMD 118 (178)
T ss_pred EEEEecCCccCCCCCHHHheeec---------------------------------------CCHHHHHHHHHHHHHHCC
Confidence 999999999886 4999999763 999999999999999999
Q ss_pred CCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCE
Q 001411 992 PSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGK 1048 (1082)
Q Consensus 992 ~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1048 (1082)
|+++||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.+ ||+|++|++|+
T Consensus 119 p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 119 PDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 999999999999999999999999998754 6899999999999985 99999999985
No 488
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=7.8e-40 Score=356.57 Aligned_cols=214 Identities=26% Similarity=0.373 Sum_probs=172.4
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCC--CCCCcEEEECCeeCCCCCHHHH-hhh
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLY--EPTSGKILLDGHDLKSLQLKWL-REQ 282 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~--~~~~G~i~~~g~~~~~~~~~~~-~~~ 282 (1082)
|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|+++...+.... +..
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 478999999974 34999999999999999999999999999999999994 7999999999999987776554 445
Q ss_pred ceEEccCCCcChh-cHHHHHhcCCCC---------CCHHHHHHHHHHhchHHHHhcCCCCccc-cccCCCC-CCChHHHH
Q 001411 283 MGLVSQEPALFAT-SIANNILLGKED---------ASMDRVIEAAKAANAHSFVEGLPDGYQT-QVGEGGT-QLSGGQKQ 350 (1082)
Q Consensus 283 i~~v~Q~~~l~~~-ti~~ni~~g~~~---------~~~~~~~~~~~~~~~~~~i~~lp~g~~t-~~g~~g~-~LSgGqkq 350 (1082)
++|++|++.+|++ |++||+.+.... .+.++..+ .+.+.++.+ |++. ....... .|||||||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~q 151 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLK-----LLKAKLALL--GMDEEFLNRSVNEGFSGGEKK 151 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHH-----HHHHHHHHc--CCchhhcccccccCcCHHHHH
Confidence 9999999998886 999999764211 01111111 111222222 2321 1223333 59999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc--CCEEEEEeCCEEEEecCchh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD--VDTIMVLKNGQVVESGTHVD 427 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~--~d~i~~l~~G~i~~~g~~~~ 427 (1082)
|++|||||+.+|+++||||||++||+.+.+.+.+.|.++. +++|+|+|||+++.+.. ||++++|++|++++.|++++
T Consensus 152 rl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (243)
T TIGR01978 152 RNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVEL 231 (243)
T ss_pred HHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHH
Confidence 9999999999999999999999999999999999999875 46899999999999875 79999999999999998765
Q ss_pred h
Q 001411 428 L 428 (1082)
Q Consensus 428 l 428 (1082)
+
T Consensus 232 ~ 232 (243)
T TIGR01978 232 A 232 (243)
T ss_pred h
Confidence 4
No 489
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-40 Score=357.89 Aligned_cols=218 Identities=33% Similarity=0.535 Sum_probs=179.6
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCC-----CcEEEECCeeCCC--CCHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT-----SGKILLDGHDLKS--LQLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~-----~G~i~~~g~~~~~--~~~~ 277 (1082)
-++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 3789999999974 35999999999999999999999999999999999999874 8999999999864 3445
Q ss_pred HHhhhceEEccCCCcChh-cHHHHHhcCCCC--C-CHHHHHHHH----HHhchHHHHhcCCCCccccccCCCCCCChHHH
Q 001411 278 WLREQMGLVSQEPALFAT-SIANNILLGKED--A-SMDRVIEAA----KAANAHSFVEGLPDGYQTQVGEGGTQLSGGQK 349 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~-ti~~ni~~g~~~--~-~~~~~~~~~----~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqk 349 (1082)
.+++.++|++|++.+|+. |+.||+.++... . ..++..+.+ +..++.+ +..........+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~ 154 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWD-------EVKDRLKTPATGLSGGQQ 154 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcch-------hhhhhhcCCcccCCHHHH
Confidence 678889999999999885 999999865321 1 222222221 2222111 111223345678999999
Q ss_pred HHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhh
Q 001411 350 QRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 428 (1082)
Q Consensus 350 qri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 428 (1082)
||++|||||+++|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14272 155 QRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQL 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777999999999999875 899999999999999999988
Q ss_pred hhc
Q 001411 429 ISK 431 (1082)
Q Consensus 429 ~~~ 431 (1082)
...
T Consensus 235 ~~~ 237 (252)
T PRK14272 235 FTN 237 (252)
T ss_pred HhC
Confidence 654
No 490
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.2e-40 Score=312.42 Aligned_cols=191 Identities=32% Similarity=0.554 Sum_probs=166.1
Q ss_pred CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcChhcHH
Q 001411 219 PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIA 298 (1082)
Q Consensus 219 ~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~ 298 (1082)
..++|+++||++.+||+++|+||||||||||+|.++-+.+|++|++++.|++++.++++.+|++|+||.|.|.||.+||.
T Consensus 15 ~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~tVe 94 (223)
T COG4619 15 DAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGDTVE 94 (223)
T ss_pred CCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccccccchh
Confidence 44599999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCC---C-CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCC
Q 001411 299 NNILLGKED---A-SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSAL 374 (1082)
Q Consensus 299 ~ni~~g~~~---~-~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~illlDEpts~L 374 (1082)
||+.|...- . +..... +++.+.. -.++.+..+..+||||||||+||+|-|---|+||+||||||+|
T Consensus 95 DNlifP~~~r~rr~dr~aa~---------~llar~~-l~~~~L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~TsAL 164 (223)
T COG4619 95 DNLIFPWQIRNRRPDRAAAL---------DLLARFA-LPDSILTKNITELSGGEKQRIALIRNLQFMPKILLLDEITSAL 164 (223)
T ss_pred hccccchHHhccCCChHHHH---------HHHHHcC-CchhhhcchhhhccchHHHHHHHHHHhhcCCceEEecCchhhc
Confidence 999986321 0 111111 2333321 1245667778899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHc--CCCeEEEEccCccc-cccCCEEEEEeCCEE
Q 001411 375 DAESELIVQRALEKIM--SNRTTIVVAHRLST-VRDVDTIMVLKNGQV 419 (1082)
Q Consensus 375 D~~~~~~i~~~l~~~~--~~~t~i~vtH~~~~-~~~~d~i~~l~~G~i 419 (1082)
|+.+.+.|.+.|.++. ++..++.|||+.+. ++.+|+++-+..|++
T Consensus 165 D~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~ 212 (223)
T COG4619 165 DESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHA 212 (223)
T ss_pred ChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcc
Confidence 9999999999998875 46899999999998 788999999999875
No 491
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=358.73 Aligned_cols=218 Identities=28% Similarity=0.448 Sum_probs=184.1
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCC----CC
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLK----SL 274 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~----~~ 274 (1082)
+.|+++|++++|++. ++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++. ..
T Consensus 15 ~~l~~~~l~~~~~~~--~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~~~ 92 (265)
T PRK14252 15 QKSEVNKLNFYYGGY--QALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSPEV 92 (265)
T ss_pred ceEEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccccc
Confidence 569999999999753 499999999999999999999999999999999999875 7999999998774 23
Q ss_pred CHHHHhhhceEEccCCCcChhcHHHHHhcCCCC--C-----CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChH
Q 001411 275 QLKWLREQMGLVSQEPALFATSIANNILLGKED--A-----SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGG 347 (1082)
Q Consensus 275 ~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-----~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgG 347 (1082)
+...+++.++|++|++.+|+.|++||+.++... . ..+++.++++.+++.+ ++.+..+.....||||
T Consensus 93 ~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G 165 (265)
T PRK14252 93 DPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-------EVKDRLGDLAFNLSGG 165 (265)
T ss_pred CHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-------hhhHHHhCCcccCCHH
Confidence 445678889999999999999999999875311 1 1233444444443322 3334456667899999
Q ss_pred HHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEeCCEEEEecCch
Q 001411 348 QKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHV 426 (1082)
Q Consensus 348 qkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~ 426 (1082)
||||++|||||+++|+++||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+. .||++++|++|++++.|+++
T Consensus 166 ~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~~~ 245 (265)
T PRK14252 166 QQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGATD 245 (265)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999998877789999999999986 58999999999999999998
Q ss_pred hhhh
Q 001411 427 DLIS 430 (1082)
Q Consensus 427 ~l~~ 430 (1082)
++..
T Consensus 246 ~~~~ 249 (265)
T PRK14252 246 TIFI 249 (265)
T ss_pred HHHh
Confidence 8764
No 492
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2.5e-39 Score=351.66 Aligned_cols=208 Identities=26% Similarity=0.465 Sum_probs=180.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcce
Q 001411 834 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 913 (1082)
Q Consensus 834 ~I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 913 (1082)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +..+
T Consensus 4 ~l~~~~l~~~~~---~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i 69 (251)
T PRK09544 4 LVSLENVSVSFG---QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRI 69 (251)
T ss_pred EEEEeceEEEEC---CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCE
Confidence 489999999996 34699999999999999999999999999999999999999999999987 3479
Q ss_pred EEEcccCcccc---ccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHcc
Q 001411 914 GLVQQEPALFS---TTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILK 990 (1082)
Q Consensus 914 ~~VpQdp~Lf~---gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~ 990 (1082)
+|+||+|.++. .|+++|+.+. +..+++++.++++..++.++..+ ....||||||||++||||+++
T Consensus 70 ~~v~q~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qrv~laral~~ 137 (251)
T PRK09544 70 GYVPQKLYLDTTLPLTVNRFLRLR-PGTKKEDILPALKRVQAGHLIDA-----------PMQKLSGGETQRVLLARALLN 137 (251)
T ss_pred EEeccccccccccChhHHHHHhcc-ccccHHHHHHHHHHcCChHHHhC-----------ChhhCCHHHHHHHHHHHHHhc
Confidence 99999998765 4899998652 33456778888888888766543 235799999999999999999
Q ss_pred CCCEEEeeCCCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChHHHhhhccchHH
Q 001411 991 NPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKENGIYK 1067 (1082)
Q Consensus 991 ~~~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G~~~eLl~~~~g~f~ 1067 (1082)
+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++ ++++.|+++++.. ...|.
T Consensus 138 ~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~--~~~~~ 214 (251)
T PRK09544 138 RPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSL--HPEFI 214 (251)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhC--CHHHH
Confidence 9999999999999999999999999998753 7899999999999865 999999965 7999999999875 45566
Q ss_pred HHH
Q 001411 1068 QLI 1070 (1082)
Q Consensus 1068 ~l~ 1070 (1082)
+++
T Consensus 215 ~~~ 217 (251)
T PRK09544 215 SMF 217 (251)
T ss_pred HHh
Confidence 665
No 493
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=362.22 Aligned_cols=219 Identities=28% Similarity=0.457 Sum_probs=181.5
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC-----CCCcEEEECCeeCCCC--CH
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKSL--QL 276 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~~--~~ 276 (1082)
..++++|++++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.++... +.
T Consensus 38 ~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 38 PHVVAKNFSIYYGEF--EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred eEEEEeeeEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 358999999999753 49999999999999999999999999999999999864 4999999999988643 33
Q ss_pred HHHhhhceEEccCCCcChhcHHHHHhcCCCC--C-CH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHH
Q 001411 277 KWLREQMGLVSQEPALFATSIANNILLGKED--A-SM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQK 349 (1082)
Q Consensus 277 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqk 349 (1082)
..+|+.++|++|++.+|+.|++||+.++... . .. +++.++++..++.+ +...........||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LSgGq~ 188 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWD-------EVSDRLDKNALGLSGGQQ 188 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCcc-------chhhHhhCChhhCCHHHH
Confidence 4578889999999999988999999876321 1 11 22333333333211 111233456678999999
Q ss_pred HHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhh
Q 001411 350 QRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 428 (1082)
Q Consensus 350 qri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 428 (1082)
||++|||||+.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~ 268 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQL 268 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999999864 899999999999999999888
Q ss_pred hhc
Q 001411 429 ISK 431 (1082)
Q Consensus 429 ~~~ 431 (1082)
..+
T Consensus 269 ~~~ 271 (286)
T PRK14275 269 FTN 271 (286)
T ss_pred HhC
Confidence 654
No 494
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.8e-39 Score=345.72 Aligned_cols=202 Identities=33% Similarity=0.544 Sum_probs=172.4
Q ss_pred EEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceE
Q 001411 206 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 285 (1082)
Q Consensus 206 i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 285 (1082)
++++|++++|+. .++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ .+++.++|
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999962 568999999999999999999999999999999999999999999999987543 35678999
Q ss_pred EccCCCcChh-cHHHHHhcCC-CCC-----CHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhc
Q 001411 286 VSQEPALFAT-SIANNILLGK-EDA-----SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 358 (1082)
Q Consensus 286 v~Q~~~l~~~-ti~~ni~~g~-~~~-----~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal 358 (1082)
++|+|.+|.. |++||+.++. +.. ..+++.++++..++.+...+.| .+||||||||++||||+
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 143 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARCL 143 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999875 9999998642 111 1234555666666655544444 48999999999999999
Q ss_pred ccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCccccc-cCCEEEEEeCCEEEEecC
Q 001411 359 LRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGT 424 (1082)
Q Consensus 359 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~G~i~~~g~ 424 (1082)
+.+|+++||||||++||+.+.+.+.+.|.++.+ ++|+|+|||+++.+. .||++++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999998753 689999999999876 489999999999998874
No 495
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=7.3e-41 Score=326.82 Aligned_cols=224 Identities=26% Similarity=0.487 Sum_probs=188.0
Q ss_pred CcEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHH-hhh
Q 001411 204 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL-REQ 282 (1082)
Q Consensus 204 ~~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~ 282 (1082)
..+..+|+.++|.++ ++++++||++++||+|++.||||+||||.+.++.|+.+|++|+|.+||.|++.++.... |-.
T Consensus 3 ~~L~a~~l~K~y~kr--~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKKR--KVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCCe--eeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 357889999999754 49999999999999999999999999999999999999999999999999999987654 556
Q ss_pred ceEEccCCCcChh-cHHHHHhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccC
Q 001411 283 MGLVSQEPALFAT-SIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRN 361 (1082)
Q Consensus 283 i~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~ 361 (1082)
|||+||+|.+|.+ ||+|||..-.+... .....+.+...+++.++.+ .+...-...+..||||||+|+.|||||..+
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~-~d~~~~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIARaLa~~ 157 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIRE-KDLKKAERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIARALAAN 157 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhh-cchhHHHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHHHHhcC
Confidence 9999999999988 99999986543211 1111122222233334433 556666778899999999999999999999
Q ss_pred CCeeEEeCcccCCCHHHHHHHHHHHHHHcC-CCeEEEEccCcc-ccccCCEEEEEeCCEEEEecCchhhhhcC
Q 001411 362 PKILLLDEATSALDAESELIVQRALEKIMS-NRTTIVVAHRLS-TVRDVDTIMVLKNGQVVESGTHVDLISKG 432 (1082)
Q Consensus 362 ~~illlDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~vtH~~~-~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 432 (1082)
|+.++||||++++||.+...|++.++.++. |.-|++.-|+.. ++.-|||.+++.+|++..+|+++|+.++.
T Consensus 158 P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n~ 230 (243)
T COG1137 158 PKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNNE 230 (243)
T ss_pred CCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcCh
Confidence 999999999999999999999999988864 678888889875 57889999999999999999999998753
No 496
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=9.5e-40 Score=365.62 Aligned_cols=204 Identities=25% Similarity=0.452 Sum_probs=171.4
Q ss_pred ECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCCCCcEEEECCeeCCCCCHHHHhhhceEEccCCCcC
Q 001411 214 AYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALF 293 (1082)
Q Consensus 214 ~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~ 293 (1082)
+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ....+++.+||++|++.++
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 4543 349999999999999999999999999999999999999999999999999865 3456788899999999998
Q ss_pred hh-cHHHHHhcCCCC--CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHhcccCCCeeE
Q 001411 294 AT-SIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILL 366 (1082)
Q Consensus 294 ~~-ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri~lARal~~~~~ill 366 (1082)
+. |++||+.+.... .+. +++.++++..+ +.........+||||||||++|||||+.+|++||
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lll 147 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFE-----------LGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLF 147 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------ChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 76 999999864211 111 22333333333 3333344556899999999999999999999999
Q ss_pred EeCcccCCCHHHHHHHHHHHHHHc-CCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhhhc
Q 001411 367 LDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 431 (1082)
Q Consensus 367 lDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 431 (1082)
|||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 148 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 148 LDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999999999875 47899999999999865 999999999999999999988654
No 497
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-39 Score=355.58 Aligned_cols=218 Identities=31% Similarity=0.502 Sum_probs=184.0
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC-----CCCcEEEECCeeCCCC--CHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKSL--QLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~~--~~~ 277 (1082)
.++++||++.|++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||.++... +..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 3789999999974 349999999999999999999999999999999999864 4899999999998653 455
Q ss_pred HHhhhceEEccCCCcChhcHHHHHhcCCCC---CCH----HHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHH
Q 001411 278 WLREQMGLVSQEPALFATSIANNILLGKED---ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 350 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkq 350 (1082)
.+++.++|++|++.+|+.|++||+.++... .+. +++.++++..++.+++.. ..+..+..|||||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~q 153 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKD-------KLDKSALGLSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHH-------HHhCCcccCCHHHHH
Confidence 678899999999999999999999875321 111 234445555555443321 234567789999999
Q ss_pred HHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCcccccc-CCEEEEEeCCEEEEecCchhhh
Q 001411 351 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 429 (1082)
Q Consensus 351 ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 429 (1082)
|++|||||+++|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. +|++++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14266 154 RLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIF 233 (250)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778899999999998866 7999999999999999998886
Q ss_pred hc
Q 001411 430 SK 431 (1082)
Q Consensus 430 ~~ 431 (1082)
..
T Consensus 234 ~~ 235 (250)
T PRK14266 234 IN 235 (250)
T ss_pred hC
Confidence 44
No 498
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=366.27 Aligned_cols=225 Identities=23% Similarity=0.368 Sum_probs=181.0
Q ss_pred cEEEEEEEEECCCC--CCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCC----CCCcEEEECCeeCCCCCHHH
Q 001411 205 QIEFSEVCFAYPSR--PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE----PTSGKILLDGHDLKSLQLKW 278 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~----~~~G~i~~~g~~~~~~~~~~ 278 (1082)
-++++|++++|+.. ...+|+|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|+++...+...
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 37899999999632 2349999999999999999999999999999999999986 58999999999998877655
Q ss_pred Hh----hhceEEccCCC--cCh-hcHHHHHhcCCC---C-----CC----HHHHHHHHHHhchHHHHhcCCCCccccccC
Q 001411 279 LR----EQMGLVSQEPA--LFA-TSIANNILLGKE---D-----AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGE 339 (1082)
Q Consensus 279 ~~----~~i~~v~Q~~~--l~~-~ti~~ni~~g~~---~-----~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~ 339 (1082)
++ +.|+||+|+|. +.+ .||.+|+..... . .. .+++.+.++..++.+. ......
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~--------~~~~~~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDH--------KDAMRS 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCCh--------HHHHhC
Confidence 43 47999999996 333 389999864210 0 01 1233444444444211 012344
Q ss_pred CCCCCChHHHHHHHHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcC--CCeEEEEccCcccccc-CCEEEEEeC
Q 001411 340 GGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKN 416 (1082)
Q Consensus 340 ~g~~LSgGqkqri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~t~i~vtH~~~~~~~-~d~i~~l~~ 416 (1082)
...+|||||||||+|||||+.+|++|||||||++||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 4568999999999999999999999999999999999999999999998754 7899999999999965 999999999
Q ss_pred CEEEEecCchhhhhcC-chhHH
Q 001411 417 GQVVESGTHVDLISKG-GEYAA 437 (1082)
Q Consensus 417 G~i~~~g~~~~l~~~~-~~~~~ 437 (1082)
|+|++.|+.+++..+. ..|.+
T Consensus 235 G~ive~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 235 GQTVETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred CEEEEECCHHHHHhCCCCHHHH
Confidence 9999999999987653 34544
No 499
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=355.44 Aligned_cols=218 Identities=29% Similarity=0.439 Sum_probs=185.2
Q ss_pred cEEEEEEEEECCCCCCccccceeEEEeCCCEEEEEcCCCCcHHHHHHHHHhCCCC-----CCcEEEECCeeCCCC--CHH
Q 001411 205 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSL--QLK 277 (1082)
Q Consensus 205 ~i~~~~v~~~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~--~~~ 277 (1082)
.+.+++.+++|++ ..+|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++... +..
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 5889999999964 3499999999999999999999999999999999999986 799999999998643 344
Q ss_pred HHhhhceEEccCCCcChhcHHHHHhcCCCC-----CCHHHHHHHHHHhchHHHHhcCCCCccccccCCCCCCChHHHHHH
Q 001411 278 WLREQMGLVSQEPALFATSIANNILLGKED-----ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRI 352 (1082)
Q Consensus 278 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~g~~g~~LSgGqkqri 352 (1082)
.+++.++|++|++++|+.|+.||+.++... ...+++.++++..++.+.+. ...++...+||||||||+
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVK-------DKLKVSGLSLSGGQQQRL 158 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHHHHH
Confidence 667889999999999989999999876421 11234555666555433332 233456778999999999
Q ss_pred HHHHhcccCCCeeEEeCcccCCCHHHHHHHHHHHHHHcCCCeEEEEccCccccc-cCCEEEEEe--------CCEEEEec
Q 001411 353 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLK--------NGQVVESG 423 (1082)
Q Consensus 353 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~vtH~~~~~~-~~d~i~~l~--------~G~i~~~g 423 (1082)
+|||||+++|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+. .||+|++|+ +|++++.|
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g 238 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMG 238 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeC
Confidence 999999999999999999999999999999999999877789999999999876 489999996 89999999
Q ss_pred Cchhhhhc
Q 001411 424 THVDLISK 431 (1082)
Q Consensus 424 ~~~~l~~~ 431 (1082)
+++++.+.
T Consensus 239 ~~~~~~~~ 246 (261)
T PRK14263 239 PTAQIFQN 246 (261)
T ss_pred CHHHHHhC
Confidence 99998754
No 500
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-39 Score=332.79 Aligned_cols=171 Identities=58% Similarity=0.948 Sum_probs=161.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccCCCCCHHHHhcceE
Q 001411 835 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 914 (1082)
Q Consensus 835 I~~~~Vs~~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 914 (1082)
|+++|++++|+.. ..++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++...+...+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (171)
T cd03228 1 IEFKNVSFSYPGR-PKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIA 79 (171)
T ss_pred CEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEE
Confidence 4789999999732 236999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEcccCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhhCcccccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 001411 915 LVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSI 994 (1082)
Q Consensus 915 ~VpQdp~Lf~gTIreNl~~~~~~~~d~ei~~al~~a~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlaLARAlL~~~~I 994 (1082)
|+||+|.+|+.|+.||+ ||+|||||++||||++++|++
T Consensus 80 ~~~~~~~~~~~t~~e~l------------------------------------------LS~G~~~rl~la~al~~~p~l 117 (171)
T cd03228 80 YVPQDPFLFSGTIRENI------------------------------------------LSGGQRQRIAIARALLRDPPI 117 (171)
T ss_pred EEcCCchhccchHHHHh------------------------------------------hCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhccCEEEEEeCCE
Q 001411 995 LLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGK 1048 (1082)
Q Consensus 995 LlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1048 (1082)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|+
T Consensus 118 lllDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 118 LILDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EEEECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 999999999999999999999998877899999999999998899999999985
Done!