Query 001411
Match_columns 1082
No_of_seqs 321 out of 4393
Neff 8.5
Searched_HMMs 29240
Date Tue Mar 26 16:15:50 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001411.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_713-717//hhsearch_pdb/001411hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1544.4 117.5 1070 3-1076 214-1319(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1374.5 104.2 1074 3-1078 186-1275(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 821.5 72.3 577 495-1074 59-654 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 755.7 59.5 576 497-1075 34-627 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 719.0 63.2 572 496-1077 23-594 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 715.8 71.0 568 501-1076 14-581 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 713.9 66.6 571 499-1074 3-577 (578)
8 2yl4_A ATP-binding cassette SU 1.0 1 1 703.9 72.9 579 498-1079 7-589 (595)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 698.0 75.9 567 498-1074 13-580 (582)
10 3b60_A Lipid A export ATP-bind 1.0 1 1 697.7 72.9 568 497-1074 12-580 (582)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1544.42 Aligned_cols=1070 Identities=39% Similarity=0.595 Sum_probs=920.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 57999899999999999997859999999999999999999999999999999999999999999999934999999511
Q 001411 3 TGHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVG 82 (1082)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~gi~~ik~~~~ 82 (1082)
++.++..+..++++++++|+++|.+++++++.+|+++++..++.+.+++...+.++..++.++.+.|.++|+++||+|++
T Consensus 214 l~~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~ 293 (1321)
T 4f4c_A 214 IGMAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNG 293 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999989999999999999999999999999999999999999999999999983999998214
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 49999999999999999979997998788999999999999999999999998087796789999999999999999999
Q 001411 83 EAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAA 162 (1082)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~ 162 (1082)
|+.+.++|.+..++..+...+.....+...++..++.++..++++|+|++++.+|.+++|.+++++.++.....++..+.
T Consensus 294 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~ 373 (1321)
T 4f4c_A 294 LRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAG 373 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 29999999999999999999999999999999999999999999999999999599869999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC-CCCCCCEEEEEECCCEEEEECC
Q ss_conf 999999999999999999972159999999998888889877489997899889999-8641010388748989999849
Q 001411 163 PNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGP 241 (1082)
Q Consensus 163 ~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~-~~~l~~is~~i~~G~~~~ivG~ 241 (1082)
+.+..++.+.++++|++++++.+++.+.. ........+..+.|+++||+|+||+++ .++|+|+||++++|+.++||||
T Consensus 374 ~~~~~~~~~~~s~~ri~~~l~~~~~~~~~-~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~ 452 (1321)
T 4f4c_A 374 PQLAVLGTAQGAASGIYEVLDRKPVIDSS-SKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGS 452 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCCSSCS-SSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEEC
T ss_conf 99999999999999999997178534566-65565677888767999855407999987433331886228827899805
Q ss_pred CCCCHHHHHHHHHHCCCCCCCEEEECCEECCCCCHHHHHHHCEEECCCCCCCHHCHHHHHHCCCCCCCHHHHHHHHHHHC
Q ss_conf 98808999999970788997679998950788787888411358736777672209998833999999999999999954
Q 001411 242 SGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAAN 321 (1082)
Q Consensus 242 sGsGKSTll~~l~g~~~~~~G~i~i~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~ 321 (1082)
||||||||+++|.|+|+|++|+|.+||+|+++++..++|++|+||+|+||||++||+|||++|.++.++++++++|+.++
T Consensus 453 sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~ 532 (1321)
T 4f4c_A 453 SGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMAN 532 (1321)
T ss_dssp SSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 89857788887545651644861579965011259998504666587533207861678864155220999999998756
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 49888629987554235899989968999999998605699765771754588989799999999977099739998049
Q 001411 322 AHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHR 401 (1082)
Q Consensus 322 ~~~~i~~l~~g~~t~~~~~g~~LSgGqkqrialARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~tvi~vtH~ 401 (1082)
++++++.+|+||+|.+||+|.+|||||||||+||||+|++|+|+|||||||+||+++++.+++++.++.+++|+|+||||
T Consensus 533 l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHr 612 (1321)
T 4f4c_A 533 AEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHR 612 (1321)
T ss_dssp CHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSC
T ss_pred CHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 54688708888860755898877777879999999872599989984554468878999999999998479889997363
Q ss_pred CCCCCCCCEEEEEECCEEEEECCCHHHHHCCCHHHHHHHHHHCCCC-----CCCCCCC--------CCCC--CCCCCCCC
Q ss_conf 4300138979999497898841710322008325999985301256-----8998656--------7898--88888878
Q 001411 402 LSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQSSEHL-----SNPSSIC--------YSGS--SRYSSFRD 466 (1082)
Q Consensus 402 ~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~--------~~~~--~~~~~~~~ 466 (1082)
++++..||+|++|++|+|++.|+|+||+++++.|++++..+..... +...... .... .......+
T Consensus 613 ls~i~~aD~Iivl~~G~ive~Gth~eL~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1321)
T 4f4c_A 613 LSTIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDD 692 (1321)
T ss_dssp TTTTTTCSEEEEEETTEEEEEECHHHHHTTTCHHHHHHHHHHHHHHHHHHHCC---------------------------
T ss_pred HHHHHHCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 87898689899963996513689999998532799999962212222332334433223211122222342222222110
Q ss_pred CCCCCCC---CHHHHHHH-------------HHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9888664---12110124-------------4210147788899316999999820135799999999999876787999
Q 001411 467 FPSSRRY---DVEFESSK-------------RRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFA 530 (1082)
Q Consensus 467 ~~~~~~~---~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (1082)
.....+. ......+. ....+...........+++++.+.++.+..+.++.+.+.+.+...+.+.
T Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~ 772 (1321)
T 4f4c_A 693 IMNRVRSSTIGSITNGPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYS 772 (1321)
T ss_dssp -----------------------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 22111013212456774025777531540389999999970786310999999987789999999999999999999999
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999750999345674898999999999999999999999999999999999999999999981997643346777
Q 001411 531 LGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENN 610 (1082)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~i~~~~~~~f~~~~~~ 610 (1082)
+.+..++..+...... .......|..++++++++..++.++..+...+.+.++..++|.++++++++.|++||+..+++
T Consensus 773 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~ 851 (1321)
T 4f4c_A 773 VFFTSFMNVFAGNPAD-FLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNA 851 (1321)
T ss_dssp HHHHHHHHHTSSCSST-TTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGC
T ss_pred HHHHHHHHHHCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC
T ss_conf 9999999875179345-566789999999999999999999999999999999999999999888734993332167888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 45899999842999999998899999999999999999999997889999999999999999999999846899999999
Q 001411 611 TGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAY 690 (1082)
Q Consensus 611 ~G~l~~r~~~Di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1082)
+|++++|+++|++.++..++..+..++..++.++..++++++++|.+++++++++|++++..+...+.......+..+..
T Consensus 852 ~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1321)
T 4f4c_A 852 SGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEF 931 (1321)
T ss_dssp HHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHH
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 48888502505999999999999999998653777702213786899999999888999999999999999999999998
Q ss_pred HHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999997017999971717999999999983699999999999999999999999999999999999999817989
Q 001411 691 SRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSN 770 (1082)
Q Consensus 691 ~~~~~~~~e~l~gi~~Ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~ 770 (1082)
.+....+.|++.|+++||+|++++++.+++.+..+...+...+......+...+...+..+..++++|++..++..+..+
T Consensus 932 ~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~ 1011 (1321)
T 4f4c_A 932 ADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPT 1011 (1321)
T ss_dssp HHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 88988999999627988861414889999999999999999999999999999999999999999998757887537654
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC
Q ss_conf 88899--9999999999999999988999999999899999964233567999989854456556499986888889999
Q 001411 771 FGDIM--KSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRP 848 (1082)
Q Consensus 771 ~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~Vsf~Y~~~~ 848 (1082)
.+... ..+........++.......+.+.....+..|+.++++.+++.++.. ...+.++..|.|+|+||+|+||.++
T Consensus 1012 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~-~~~~~~~~~g~I~f~nVsf~Y~~~~ 1090 (1321)
T 4f4c_A 1012 MQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLS-LAGEKKKLYGKVIFKNVRFAYPERP 1090 (1321)
T ss_dssp SCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTC-CCSBCCCCCCCEEEEEEEECCTTSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCEEEEEEEEEECCCCC
T ss_conf 214789999999987788999999999999999999998999860766577766-7787888888189998798579999
Q ss_pred CCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCEEEECCCCCCCCCCHH
Q ss_conf 96530120387628958999838999778899988132669841899999507999978873332888366766642478
Q 001411 849 DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIY 928 (1082)
Q Consensus 849 ~~~vL~~isl~I~~Ge~iaIvG~SGsGKSTL~~lL~gl~~p~~G~I~idg~di~~~~~~~lr~~i~~vpQ~~~lf~gTIr 928 (1082)
+.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+|++++++++||++|+||||||++|+||||
T Consensus 1091 ~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIr 1170 (1321)
T 4f4c_A 1091 EIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIA 1170 (1321)
T ss_dssp SSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHH
T ss_pred CCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHH
T ss_conf 88212451699889899999899998199999999568638997899999986549999998545998789973272399
Q ss_pred HHHCCCC--CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH
Q ss_conf 8832399--88799999999999008899962746544422699998992499999999997039987785177789897
Q 001411 929 ENIKYGN--EDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDT 1006 (1082)
Q Consensus 929 eNl~~~~--~~~~d~ei~~a~~~a~l~~~I~~lp~gldt~i~e~g~~LSgGQkQrlaLARAll~~p~ILiLDEpTS~LD~ 1006 (1082)
|||++|. ++++|+++++|++.++++++|.+||+||||.+||+|.+||||||||||||||++++|+|||||||||+||+
T Consensus 1171 eNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~ 1250 (1321)
T 4f4c_A 1171 ENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDT 1250 (1321)
T ss_dssp HHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTS
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH
T ss_conf 99745499999999999999998298499971767899982388915699999999999999717998999681115789
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECCHHHHHHHCCCHHHHHHHHHHCC
Q ss_conf 9899999999986189649998069225530588999959889882596789510052489999984123
Q 001411 1007 ASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQDK 1076 (1082)
Q Consensus 1007 ~te~~I~~~L~~~~~~~TvI~IsHrl~~i~~~DrI~vl~~G~ive~G~~~eLl~~~~~~y~~l~~~~~~~ 1076 (1082)
+||+.|+++|++.+++||+|+||||++++.+||+|+||++|+|+|+|+|+||++ .+|.|++||+.|...
T Consensus 1251 ~tE~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~-~~g~y~~L~~~Q~~e 1319 (1321)
T 4f4c_A 1251 ESEKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMS-EKGAYYKLTQKQMTE 1319 (1321)
T ss_dssp HHHHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHH-CC-------------
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHH-CCCHHHHHHHHHHHC
T ss_conf 999999999999739998999606899999699999998989999888899984-980999999999850
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1374.53 Aligned_cols=1074 Identities=40% Similarity=0.673 Sum_probs=919.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 57999899999999999997859999999999999999999999999999999999999999999999934999999511
Q 001411 3 TGHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVG 82 (1082)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~gi~~ik~~~~ 82 (1082)
++.++..+..+++.++++++++|.+++++++.+|+++++..++.+..++...+.++..++.++.+.|.++|+++||+|++
T Consensus 186 ~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~ 265 (1284)
T 3g5u_A 186 IGMFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGG 265 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCC
T ss_conf 99999999999999999999989999999999999999999999999999999999999999999999978799998465
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 49999999999999999979997998788999999999999999999999998087796789999999999999999999
Q 001411 83 EAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAA 162 (1082)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~ 162 (1082)
|+.+.++|.+..++..+...+.....+...++..++.+...++++|+|++++..|.+++|.+++.+.+......++.++.
T Consensus 266 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~ 345 (1284)
T 3g5u_A 266 QKKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQAS 345 (1284)
T ss_dssp CCSHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 39999999999999999999999999999999999999999999999999999299889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC-CCCCCCEEEEEECCCEEEEECC
Q ss_conf 999999999999999999972159999999998888889877489997899889999-8641010388748989999849
Q 001411 163 PNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGP 241 (1082)
Q Consensus 163 ~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~-~~~l~~is~~i~~G~~~~ivG~ 241 (1082)
+.+..++.+.++++|++++++.+++.... ...+...+...+.|+++||+|+|++++ .++|+|+||++++||+++|+||
T Consensus 346 ~~~~~~~~~~~a~~ri~~~l~~~~~~~~~-~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~ 424 (1284)
T 3g5u_A 346 PNIEAFANARGAAYEVFKIIDNKPSIDSF-SKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGN 424 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCCCCSSC-CSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECC
T ss_conf 99999999999999999997289867766-65677777777718999989976999987101254589759988999899
Q ss_pred CCCCHHHHHHHHHHCCCCCCCEEEECCEECCCCCHHHHHHHCEEECCCCCCCHHCHHHHHHCCCCCCCHHHHHHHHHHHC
Q ss_conf 98808999999970788997679998950788787888411358736777672209998833999999999999999954
Q 001411 242 SGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAAN 321 (1082)
Q Consensus 242 sGsGKSTll~~l~g~~~~~~G~i~i~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~ 321 (1082)
||||||||+++|+|+++|++|+|.+||+++.+.+..++|++++||+|+|++|++||+|||.+|.++.++++++++++.++
T Consensus 425 sGsGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~ 504 (1284)
T 3g5u_A 425 SGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEAN 504 (1284)
T ss_dssp SSSSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHC
T ss_conf 99979999999807889997389999998775799999865489868875377669999745798999999999999829
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 49888629987554235899989968999999998605699765771754588989799999999977099739998049
Q 001411 322 AHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHR 401 (1082)
Q Consensus 322 ~~~~i~~l~~g~~t~~~~~g~~LSgGqkqrialARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~tvi~vtH~ 401 (1082)
+++++..+|+|++|.+|++|.+||||||||++||||++++|+|++||||||+||+++++.+.+.++...+++|+|+||||
T Consensus 505 ~~~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~ 584 (1284)
T 3g5u_A 505 AYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHR 584 (1284)
T ss_dssp CHHHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSC
T ss_pred CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 69999746563345014787865999999999999995299989997987777999999999999997399989999407
Q ss_pred CCCCCCCCEEEEEECCEEEEECCCHHHHHCCCHHHHHHHHHHCCCCCCCCCC---CCCCC--CCCCCCCCCCC--CCCCC
Q ss_conf 4300138979999497898841710322008325999985301256899865---67898--88888878988--86641
Q 001411 402 LSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQSSEHLSNPSSI---CYSGS--SRYSSFRDFPS--SRRYD 474 (1082)
Q Consensus 402 ~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~--~~~~~ 474 (1082)
++.+..+|+|++|++|++++.|+|++++++++.|.+++..+........... ..... ........... .....
T Consensus 585 l~~i~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (1284)
T 3g5u_A 585 LSTVRNADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRST 664 (1284)
T ss_dssp HHHHTTCSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHTC--------------------------------------
T ss_pred HHHHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78997499899998999999788999986787799999974300221113333332222234433333333200034543
Q ss_pred -HH---H-HHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-HHH
Q ss_conf -21---1-01244210147788899316999999820135799999999999876787999999999997509993-456
Q 001411 475 -VE---F-ESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHD-SQI 548 (1082)
Q Consensus 475 -~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 548 (1082)
.. . ........++......+....++++.+.++.|+++.++.++..+.+...+.+++.+..++..+..... ...
T Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 744 (1284)
T 3g5u_A 665 RKSICGPHDQDRKLSTKEALDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQ 744 (1284)
T ss_dssp -------------------CCCCCSCCCTTHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 33445642233211024555313662589999998451579999999999999999999999999999998556850336
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 74898999999999999999999999999999999999999999999981997643346777458999998429999999
Q 001411 549 KRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSA 628 (1082)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~i~~~~~~~f~~~~~~~G~l~~r~~~Di~~i~~~ 628 (1082)
......+..++++++++..+..++..+...+.+.++..++|..++++++++|++||+..++++|++++|+++|++.++..
T Consensus 745 ~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~ 824 (1284)
T 3g5u_A 745 RQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGA 824 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 77999999999999999999999999999999999999999999999983998887578998899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 98899999999999999999999997889999999999999999999999846899999999999999999970179999
Q 001411 629 LADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVA 708 (1082)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik 708 (1082)
+...+..++..+..++..+++++.++|.+++++++.+|+++++.+...+..........+...+....+.|++.|+++||
T Consensus 825 ~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~ 904 (1284)
T 3g5u_A 825 TGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVV 904 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999996999999999999999999999999999999999999999999999998899999
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 71717999999999983699999999999999999999999999999999999999817989888999999999999999
Q 001411 709 AYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAV 788 (1082)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~g~~~~~~~~~~~~~~~~ 788 (1082)
+|++++.+.++|.+..+...+...+...+......+.+.+.++..++++|+|.+++..+.++++.++.++.+......++
T Consensus 905 a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1284)
T 3g5u_A 905 SLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAV 984 (1284)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 84659999999999999999999999999999999999999999999999999999909806999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEE
Q ss_conf 99998899999999989999996423356799998985445655649998688888999996530120387628958999
Q 001411 789 AETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAV 868 (1082)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~iaI 868 (1082)
.......+.+..+..+..|+.+.++.+++..+.......+++..+.|+++||+|+|+.+++.++|+|+||+|++||++||
T Consensus 985 ~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~i 1064 (1284)
T 3g5u_A 985 GQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLAL 1064 (1284)
T ss_dssp HHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEE
T ss_conf 99999999999999999999999838876666555665456777857999989977999987002030599769988999
Q ss_pred ECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCEEEECCCCCCCCCCHHHHHCCCCC--CCCHHHHHHH
Q ss_conf 83899977889998813266984189999950799997887333288836676664247888323998--8799999999
Q 001411 869 VGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNE--DASEIELMKA 946 (1082)
Q Consensus 869 vG~SGsGKSTL~~lL~gl~~p~~G~I~idg~di~~~~~~~lr~~i~~vpQ~~~lf~gTIreNl~~~~~--~~~d~ei~~a 946 (1082)
|||||||||||+++|.|+|+|++|+|.+||+|+++++.+.+|++++||||||.+|++||+||+.++.+ ..++++++++
T Consensus 1065 vG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~ 1144 (1284)
T 3g5u_A 1065 VGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRA 1144 (1284)
T ss_dssp ECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 88999978999999946867899779899998000789999702689877874066669999746687789999999999
Q ss_pred HHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 99900889996274654442269999899249999999999703998778517778989798999999999861896499
Q 001411 947 TKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTI 1026 (1082)
Q Consensus 947 ~~~a~l~~~I~~lp~gldt~i~e~g~~LSgGQkQrlaLARAll~~p~ILiLDEpTS~LD~~te~~I~~~L~~~~~~~TvI 1026 (1082)
++.++++++++++|+||||.+||+|.+||||||||+|||||++++|+|||||||||+||+.+++.|++.|++..+++|+|
T Consensus 1145 ~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi 1224 (1284)
T 3g5u_A 1145 AKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCI 1224 (1284)
T ss_dssp HHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEE
T ss_pred HHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99839599997270424561178889338999999999999974999999868755579999999999999867999899
Q ss_pred EEECCCHHHHCCCEEEEEECCEEEEECCHHHHHHHCCCHHHHHHHHHHCCCC
Q ss_conf 9806922553058899995988988259678951005248999998412398
Q 001411 1027 MVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQDKNP 1078 (1082)
Q Consensus 1027 ~IsHrl~~i~~~DrI~vl~~G~ive~G~~~eLl~~~~~~y~~l~~~~~~~~~ 1078 (1082)
+||||++++..||||++|++|+++|.|+|++|++ .+|.|++||..|.....
T Consensus 1225 ~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~-~~g~y~~l~~~q~~~~~ 1275 (1284)
T 3g5u_A 1225 VIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLA-QKGIYFSMVSVQAGAKR 1275 (1284)
T ss_dssp EECSCTTGGGSCSEEEEEETBEEEEEECHHHHHH-SCSHHHHHHHHHC----
T ss_pred EEECCHHHHHCCCEEEEEECCEEEEECCHHHHHH-CCCHHHHHHHHHHHCCC
T ss_conf 9955879998099899998998999778999984-77779999999761322
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=821.52 Aligned_cols=577 Identities=36% Similarity=0.592 Sum_probs=517.0
Q ss_pred CHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------------C----CHHHHHHHHHH
Q ss_conf 31699999982013-57999999999998767879999999999975099--------------9----34567489899
Q 001411 495 SPSIWELLKLNAAE-WPYAVLGSVGAILAGMEAPLFALGITHILTAFYSP--------------H----DSQIKRVVDQV 555 (1082)
Q Consensus 495 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~----~~~~~~~~~~~ 555 (1082)
..++++++++..+. +..++++.+++.+.++..|++.+.++.+++.+... . .......+..+
T Consensus 59 ~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (1321)
T 4f4c_A 59 KVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNV 138 (1321)
T ss_dssp CCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHH
T ss_pred CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 77999973156767899999999999999999999999999999999701000145430003443100168999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999819976433467774589999984299999999889999
Q 001411 556 ALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSI 635 (1082)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~i~~~~~~~f~~~~~~~G~l~~r~~~Di~~i~~~~~~~~~~ 635 (1082)
...++++++...++.+++.++..+.+.+...++|.++|++++++|++||+. +++|++++|+++|++.+++.+...+..
T Consensus 139 ~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~--~~~G~l~sr~~~D~~~i~~~~~~~l~~ 216 (1321)
T 4f4c_A 139 VWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDT--NHSGTLATKLFDNLERVKEGTGDKIGM 216 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHH--TCCTTHHHHHHHHHHHHHHTSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999997889899879--984899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHH
Q ss_conf 99999999999999999978899999999999999999999998468999999999999999999701799997171799
Q 001411 636 IVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKR 715 (1082)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~~~~ 715 (1082)
++..+..++.+++++++++|.+++++++.+|+++++.....+..++...+.+....+..+.+.|.++|+++||+|++|+.
T Consensus 217 ~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 296 (1321)
T 4f4c_A 217 AFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRY 296 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999983999998214299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999836999999999999999999999999999999999999998179898889999999999999999999889
Q 001411 716 ISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALA 795 (1082)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 795 (1082)
+.++|.+..++..+...+.........+...++..+..++++|+|.+++..|.+++|.+++++.+......|+..+....
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~ 376 (1321)
T 4f4c_A 297 ELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQL 376 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999599869999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCC
Q ss_conf 99999999899999964233567999989854456556499986888889999965301203876289589998389997
Q 001411 796 PDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSG 875 (1082)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~iaIvG~SGsG 875 (1082)
..+..+..+..|+.++++.+++.++.......+.+..+.|+|+||+|+||.+++.++|+|+||+|++||++|||||||||
T Consensus 377 ~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsG 456 (1321)
T 4f4c_A 377 AVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCG 456 (1321)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCCC
T ss_conf 99999999999999997178534566655656778887679998554079999874333318862288278998058985
Q ss_pred HHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCEEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHH
Q ss_conf 78899988132669841899999507999978873332888366766642478883239988799999999999008899
Q 001411 876 KSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGF 955 (1082)
Q Consensus 876 KSTL~~lL~gl~~p~~G~I~idg~di~~~~~~~lr~~i~~vpQ~~~lf~gTIreNl~~~~~~~~d~ei~~a~~~a~l~~~ 955 (1082)
||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||+|.+|++||||||.+|+++++++++++||+.++++++
T Consensus 457 KSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~ 536 (1321)
T 4f4c_A 457 KSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKF 536 (1321)
T ss_dssp HHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHH
T ss_conf 77888875456516448615799650112599985046665875332078616788641552209999999987565468
Q ss_pred HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
Q ss_conf 96274654442269999899249999999999703998778517778989798999999999861896499980692255
Q 001411 956 ISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTI 1035 (1082)
Q Consensus 956 I~~lp~gldt~i~e~g~~LSgGQkQrlaLARAll~~p~ILiLDEpTS~LD~~te~~I~~~L~~~~~~~TvI~IsHrl~~i 1035 (1082)
|+.||+|+||.|||+|.+||||||||||||||++++|+|||||||||+||+++|+.|+++|+...+++|+|+||||++++
T Consensus 537 i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls~i 616 (1321)
T 4f4c_A 537 IKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLSTI 616 (1321)
T ss_dssp HHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTTTT
T ss_pred HHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHH
T ss_conf 87088888607558988777778799999998725999899845544688789999999999984798899973638789
Q ss_pred HCCCEEEEEECCEEEEECCHHHHHHHCCCHHHHHHHHHH
Q ss_conf 305889999598898825967895100524899999841
Q 001411 1036 RNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQ 1074 (1082)
Q Consensus 1036 ~~~DrI~vl~~G~ive~G~~~eLl~~~~~~y~~l~~~~~ 1074 (1082)
+.||+|+||++|+|+|.|+|+||++ .+|.|++++..|.
T Consensus 617 ~~aD~Iivl~~G~ive~Gth~eL~~-~~g~y~~l~~~q~ 654 (1321)
T 4f4c_A 617 RNADLIISCKNGQVVEVGDHRALMA-QQGLYYDLVTAQT 654 (1321)
T ss_dssp TTCSEEEEEETTEEEEEECHHHHHT-TTCHHHHHHHHHH
T ss_pred HHCCEEEEEECCEEECCCCHHHHHH-HHHHHHHHHHHHH
T ss_conf 8689899963996513689999998-5327999999622
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=755.73 Aligned_cols=576 Identities=39% Similarity=0.644 Sum_probs=507.1
Q ss_pred HHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---------C--------HHHHHHHHHHHHH
Q ss_conf 6999999820-13579999999999987678799999999999750999---------3--------4567489899999
Q 001411 497 SIWELLKLNA-AEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPH---------D--------SQIKRVVDQVALI 558 (1082)
Q Consensus 497 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--------~~~~~~~~~~~~~ 558 (1082)
..++++.+.. ..+..+.++.+.+.+.++..+++++.++.+++.+.... . .........+...
T Consensus 34 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (1284)
T 3g5u_A 34 SVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYY 113 (1284)
T ss_dssp TTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 69999987265799999999999999999999999999999999861344433222222111110024468899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999819976433467774589999984299999999889999999
Q 001411 559 FVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQ 638 (1082)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~i~~~~~~~f~~~~~~~G~l~~r~~~Di~~i~~~~~~~~~~~~~ 638 (1082)
++++++...++.++..+...+.+.+...++|.++|++++++|++||+. +++|++++|+++|++.+++.+...+..++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~--~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~ 191 (1284)
T 3g5u_A 114 YTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDV--HDVGELNTRLTDDVSKINEGIGDKIGMFFQ 191 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHS--CCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999998699899756--887789999998899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHH
Q ss_conf 99999999999999978899999999999999999999998468999999999999999999701799997171799999
Q 001411 639 NVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISI 718 (1082)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~~~~~~~ 718 (1082)
.+..++..++++++++|.+++++++.+|++.++.....+..++...+..+..++..+++.|+++|+++||+|++|+++.+
T Consensus 192 ~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~ 271 (1284)
T 3g5u_A 192 AMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELE 271 (1284)
T ss_dssp HHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHH
T ss_conf 99999999999999989999999999999999999999999999999999999999999999978799998465399999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999836999999999999999999999999999999999999998179898889999999999999999999889999
Q 001411 719 QFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDI 798 (1082)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1082)
+|.+..+...+...+.........++..++..+..++++|+|.+++..|.++.|.+++++.+......++..+...+..+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (1284)
T 3g5u_A 272 RYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAF 351 (1284)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999299889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHH
Q ss_conf 99999899999964233567999989854456556499986888889999965301203876289589998389997788
Q 001411 799 VKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKST 878 (1082)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~iaIvG~SGsGKST 878 (1082)
..+..+..|++++++.+++.++.......+++..+.|+++||+|+|+.+++.++|+|+||+|++||++||||||||||||
T Consensus 352 ~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKST 431 (1284)
T 3g5u_A 352 ANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKST 431 (1284)
T ss_dssp HHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHH
T ss_conf 99999999999997289867766656777777777189999899769999871012545897599889998999997999
Q ss_pred HHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCEEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHH
Q ss_conf 99988132669841899999507999978873332888366766642478883239988799999999999008899962
Q 001411 879 VISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISR 958 (1082)
Q Consensus 879 L~~lL~gl~~p~~G~I~idg~di~~~~~~~lr~~i~~vpQ~~~lf~gTIreNl~~~~~~~~d~ei~~a~~~a~l~~~I~~ 958 (1082)
|+++|.|+|+|++|+|.+||+|+++++.+.+|++++||||+|.+|++||+|||.++.++.++++++++++.+++++++.+
T Consensus 432 l~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~ 511 (1284)
T 3g5u_A 432 TVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMK 511 (1284)
T ss_dssp HHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHH
T ss_conf 99998078899973899999987757999998654898688753776699997457989999999999998296999974
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCC
Q ss_conf 74654442269999899249999999999703998778517778989798999999999861896499980692255305
Q 001411 959 MPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNA 1038 (1082)
Q Consensus 959 lp~gldt~i~e~g~~LSgGQkQrlaLARAll~~p~ILiLDEpTS~LD~~te~~I~~~L~~~~~~~TvI~IsHrl~~i~~~ 1038 (1082)
+|+|+||.+|++|.+||||||||+|||||++++|+|||||||||+||+++++.+++.++...+++|+|+||||++++..|
T Consensus 512 l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~i~~~ 591 (1284)
T 3g5u_A 512 LPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNA 591 (1284)
T ss_dssp STTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCC
T ss_conf 65633450147878659999999999999952999899979877779999999999999973999899994077899749
Q ss_pred CEEEEEECCEEEEECCHHHHHHHCCCHHHHHHHHHHC
Q ss_conf 8899995988988259678951005248999998412
Q 001411 1039 DKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQD 1075 (1082)
Q Consensus 1039 DrI~vl~~G~ive~G~~~eLl~~~~~~y~~l~~~~~~ 1075 (1082)
|+|++|++|++++.|+|++|++ .++.|++++..|..
T Consensus 592 d~i~vl~~G~i~~~g~~~~l~~-~~~~~~~~~~~~~~ 627 (1284)
T 3g5u_A 592 DVIAGFDGGVIVEQGNHDELMR-EKGIYFKLVMTQTA 627 (1284)
T ss_dssp SEEEECSSSCCCCEECHHHHHH-TTSHHHHHHHHTC-
T ss_pred CEEEEEECCEEEEECCHHHHHH-CCCHHHHHHHHHHH
T ss_conf 9899998999999788999986-78779999997430
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=719.01 Aligned_cols=572 Identities=28% Similarity=0.417 Sum_probs=509.5
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 16999999820135799999999999876787999999999997509993456748989999999999999999999999
Q 001411 496 PSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHY 575 (1082)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (1082)
..+++++.+.++.++.+.+..++..+.++.....++.+..+++....... ......+..+++++.++..++.++..+
T Consensus 23 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (598)
T 3qf4_B 23 ATLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRR---FDLLPRYMLILGTIYALTSLLFWLQGK 99 (598)
T ss_dssp HHHHHHGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC---GGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999973688---899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999981997643346777458999998429999999988999999999999999999999978
Q 001411 576 FYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSW 655 (1082)
Q Consensus 576 ~~~~~~~~~~~~lr~~~~~~i~~~~~~~f~~~~~~~G~l~~r~~~Di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (1082)
...+.+.++..++|.++++++++.|+.||+. +++|++++|+++|++.+++.+...+..++.+++.+++.+++++.++|
T Consensus 100 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 177 (598)
T 3qf4_B 100 IMLTLSQDVVFRLRKELFEKLQRVPVGFFDR--TPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNV 177 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCTHHHHH--SCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999997799999768--88899999999999999999999999999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999846899999999999999999970179999717179999999999836999999999
Q 001411 656 RLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRG 735 (1082)
Q Consensus 656 ~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1082)
.++++.++.+|+..++.....+..++......+...+..+.+.|.++|+++||+|++++.+.++|.+..++..+...+..
T Consensus 178 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 257 (598)
T 3qf4_B 178 ILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQ 257 (598)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999973799999748709999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999999999999999999817989888999999999999999999988999999999899999964233
Q 001411 736 HISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRK 815 (1082)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1082)
....+...+..++..+..+++++++++++..|.+++|.+++++.+......++..+...+..+..+..+..|+.++++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~ 337 (598)
T 3qf4_B 258 IFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLE 337 (598)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999859978999999999999999999999999999999999999999997688
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 56799998985445655649998688888999996530120387628958999838999778899988132669841899
Q 001411 816 TAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVL 895 (1082)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~iaIvG~SGsGKSTL~~lL~gl~~p~~G~I~ 895 (1082)
++.+.. ...+.++..+.|+++||+|+|+. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.
T Consensus 338 ~~~~~~--~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~ 413 (598)
T 3qf4_B 338 EEKDDP--DAVELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQIL 413 (598)
T ss_dssp CCCCCS--SCCCCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEE
T ss_pred CCCCCC--CCCCCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEE
T ss_conf 777777--77777777771899998997799--98601222799869988999899999699999999458579980899
Q ss_pred ECCCCCCCCCHHHHHCCEEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 99950799997887333288836676664247888323998879999999999900889996274654442269999899
Q 001411 896 IDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 975 (1082)
Q Consensus 896 idg~di~~~~~~~lr~~i~~vpQ~~~lf~gTIreNl~~~~~~~~d~ei~~a~~~a~l~~~I~~lp~gldt~i~e~g~~LS 975 (1082)
+||+|+++++.+.+|++++||||+|.+|++||+||+.++.+..++++++++++.++++++++++|+|+||.++++|.+||
T Consensus 414 ~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LS 493 (598)
T 3qf4_B 414 VDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLS 493 (598)
T ss_dssp ETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSC
T ss_pred ECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCC
T ss_conf 99998301889999841089907982324639999744799999999999999969788897464532364227889879
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECCH
Q ss_conf 24999999999970399877851777898979899999999986189649998069225530588999959889882596
Q 001411 976 GGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSH 1055 (1082)
Q Consensus 976 gGQkQrlaLARAll~~p~ILiLDEpTS~LD~~te~~I~~~L~~~~~~~TvI~IsHrl~~i~~~DrI~vl~~G~ive~G~~ 1055 (1082)
||||||+|||||++++|+||+||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|++++.|+|
T Consensus 494 gGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~ 573 (598)
T 3qf4_B 494 QGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKH 573 (598)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCH
T ss_conf 99999999999996499999998976679999999999999998089989999427789971998999989999987789
Q ss_pred HHHHHHCCCHHHHHHHHHHCCC
Q ss_conf 7895100524899999841239
Q 001411 1056 EQLLRKENGIYKQLIRLQQDKN 1077 (1082)
Q Consensus 1056 ~eLl~~~~~~y~~l~~~~~~~~ 1077 (1082)
+|+++ .++.|++++..|....
T Consensus 574 ~~l~~-~~~~~~~~~~~~~~~~ 594 (598)
T 3qf4_B 574 DELIQ-KRGFYYELFTSQYGLV 594 (598)
T ss_dssp HHHHH-TTCHHHHHHHHHHGGG
T ss_pred HHHHH-CCCHHHHHHHHHHHHH
T ss_conf 99986-7877999999976465
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=715.76 Aligned_cols=568 Identities=29% Similarity=0.422 Sum_probs=500.7
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99982013579999999999987678799999999999750999345674898999999999999999999999999999
Q 001411 501 LLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLM 580 (1082)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (1082)
++.+.+++++.+.+..++..+..+.....++.+..+++....... ......+..+++++.++..++.++..+...+.
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (587)
T 3qf4_A 14 LARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGD---FSLVLKTGILMLIVALIGAVGGIGCTVFASYA 90 (587)
T ss_dssp GGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999873698---79999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998199764334677745899999842999999998899999999999999999999997889999
Q 001411 581 GEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAV 660 (1082)
Q Consensus 581 ~~~~~~~lr~~~~~~i~~~~~~~f~~~~~~~G~l~~r~~~Di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 660 (1082)
+.+...++|.++++++++.|+.||+ ++++|++++|+++|++.+++++...+..++.....++..+++++.++|.++++
T Consensus 91 ~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~ 168 (587)
T 3qf4_A 91 SQNFGADLRRDLFRKVLSFSISNVN--RFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSV 168 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHH--HSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999788979976--58889999999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999984689999999999999999997017999971717999999999983699999999999999
Q 001411 661 VAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGF 740 (1082)
Q Consensus 661 ~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (1082)
+++.+|++.++.....+..++..++.++...+..+.+.|.++|+++||+|++++.+.++|.+..++..+...+.......
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (587)
T 3qf4_A 169 LIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIVF 248 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998559999986214999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999999999999999999981798988899999999999999999998899999999989999996423356799
Q 001411 741 GYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQP 820 (1082)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1082)
...+..++..+..++++|++.+++..|.+++|.+++++.+......++..+...+..+..+..+..|+.++++.+++.++
T Consensus 249 ~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 328 (587)
T 3qf4_A 249 ALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEE 328 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999984993899999999999999999999999999999999999999999768976578
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCC
Q ss_conf 99898544565564999868888899999653012038762895899983899977889998813266984189999950
Q 001411 821 DDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYD 900 (1082)
Q Consensus 821 ~~~~~~~~~~~~~~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~iaIvG~SGsGKSTL~~lL~gl~~p~~G~I~idg~d 900 (1082)
.. .....++..+.|+++||+|+|+.. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||+|
T Consensus 329 ~~-~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~~ 406 (587)
T 3qf4_A 329 AD-NALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELD 406 (587)
T ss_dssp CT-TCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSSB
T ss_pred CC-CCCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
T ss_conf 87-765668888807997889984899-9764211179986998899989999979999999927866998679899998
Q ss_pred CCCCCHHHHHCCEEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 79999788733328883667666424788832399887999999999990088999627465444226999989924999
Q 001411 901 IRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 980 (1082)
Q Consensus 901 i~~~~~~~lr~~i~~vpQ~~~lf~gTIreNl~~~~~~~~d~ei~~a~~~a~l~~~I~~lp~gldt~i~e~g~~LSgGQkQ 980 (1082)
+++++.+++|++++||||+|.+|++||+||+.++.+..++++++++++.++++++++.+|+|+||.+++.|.+|||||||
T Consensus 407 i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqrQ 486 (587)
T 3qf4_A 407 VRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQ 486 (587)
T ss_dssp GGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHHH
T ss_pred CCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHHH
T ss_conf 34078999984138977898676755999985248899999999999996849999756531212751898992999999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECCHHHHHH
Q ss_conf 99999997039987785177789897989999999998618964999806922553058899995988988259678951
Q 001411 981 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLR 1060 (1082)
Q Consensus 981 rlaLARAll~~p~ILiLDEpTS~LD~~te~~I~~~L~~~~~~~TvI~IsHrl~~i~~~DrI~vl~~G~ive~G~~~eLl~ 1060 (1082)
|+|||||++++|+||+||||||+||+++++.|++.+++..+++|+|+||||++++..||+|++|++|++++.|+|+|+++
T Consensus 487 rv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~~ 566 (587)
T 3qf4_A 487 RLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELLE 566 (587)
T ss_dssp HHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHH
T ss_conf 99999999729999999797544799999999999998679998999822768898199899998998999788999986
Q ss_pred HCCCHHHHHHHHHHCC
Q ss_conf 0052489999984123
Q 001411 1061 KENGIYKQLIRLQQDK 1076 (1082)
Q Consensus 1061 ~~~~~y~~l~~~~~~~ 1076 (1082)
.++.|++++..|...
T Consensus 567 -~~~~~~~~~~~~~~~ 581 (587)
T 3qf4_A 567 -HCKPYREIYESQFGN 581 (587)
T ss_dssp -HCHHHHHHHHHHC--
T ss_pred -CCCHHHHHHHHHHCC
T ss_conf -783999999998465
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=713.87 Aligned_cols=571 Identities=29% Similarity=0.441 Sum_probs=503.3
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999998201357999999999998767879999999999975099934567489----8999999999999999999999
Q 001411 499 WELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVV----DQVALIFVGLAVVTIPVYLLQH 574 (1082)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 574 (1082)
++++.+.+++++.+.+..+...+..+...+.++.+..+++.............. ..+..+++++.++..++.++..
T Consensus 3 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (578)
T 4a82_A 3 KRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQ 82 (578)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988999999999999999999999999999999999981687114677888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998199764334677745899999842999999998899999999999999999999997
Q 001411 575 YFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILS 654 (1082)
Q Consensus 575 ~~~~~~~~~~~~~lr~~~~~~i~~~~~~~f~~~~~~~G~l~~r~~~Di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (1082)
+...+.+.++..++|.++++++++.|++||+ ++++|++++|+++|++.+++++...+..++.+.+..++.+++++.++
T Consensus 83 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 160 (578)
T 4a82_A 83 YLAQWTSNKILYDIRKKLYNHLQALSARFYA--NNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD 160 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH--TSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999878999976--89869999999999999999999999999999999999999999996
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88999999999999999999999984689999999999999999997017999971717999999999983699999999
Q 001411 655 WRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLR 734 (1082)
Q Consensus 655 ~~l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (1082)
|.++++.++.+|+++.+.....+..++..+...+...+..+.+.|.++|+++||+|++++.+.++|.+..++..+...+.
T Consensus 161 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (578)
T 4a82_A 161 VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH 240 (578)
T ss_dssp TTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998249999981664999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999999999999981798988899999999999999999998899999999989999996423
Q 001411 735 GHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYR 814 (1082)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (1082)
.+.......+..++..+..+++++++.+++..|.+++|.+++++.+......|+..+...+..+..+..+.+|+.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 320 (578)
T 4a82_A 241 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDE 320 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985995899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 35679999898544565564999868888899999653012038762895899983899977889998813266984189
Q 001411 815 KTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTV 894 (1082)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~iaIvG~SGsGKSTL~~lL~gl~~p~~G~I 894 (1082)
+++..+.. ...+.++..+.|+++||+|+|+.. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|
T Consensus 321 ~~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i 398 (578)
T 4a82_A 321 DYDIKNGV-GAQPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQI 398 (578)
T ss_dssp CCSSCCCT-TCCCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEE
T ss_pred CCCCCCCC-CCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
T ss_conf 97666787-766667778807999999975899-9741343379987999999989999859999999846788999679
Q ss_pred EECCCCCCCCCHHHHHCCEEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99995079999788733328883667666424788832399887999999999990088999627465444226999989
Q 001411 895 LIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQL 974 (1082)
Q Consensus 895 ~idg~di~~~~~~~lr~~i~~vpQ~~~lf~gTIreNl~~~~~~~~d~ei~~a~~~a~l~~~I~~lp~gldt~i~e~g~~L 974 (1082)
.+||.|+++++.+++|++++||||+|.+|++||+||+.++.+..++++++++++.++++++++++|+|+||.++++|.+|
T Consensus 399 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~L 478 (578)
T 4a82_A 399 LIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKL 478 (578)
T ss_dssp EETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTS
T ss_pred EECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCC
T ss_conf 99999844278999960068992898347645999985279998899999999880959999757330102530688967
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECC
Q ss_conf 92499999999997039987785177789897989999999998618964999806922553058899995988988259
Q 001411 975 SGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGS 1054 (1082)
Q Consensus 975 SgGQkQrlaLARAll~~p~ILiLDEpTS~LD~~te~~I~~~L~~~~~~~TvI~IsHrl~~i~~~DrI~vl~~G~ive~G~ 1054 (1082)
|||||||++||||++++|++++||||||+||+++++.+.+.+++..+++|+|+||||+++++.||+|++|++|++++.|+
T Consensus 479 SgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 558 (578)
T 4a82_A 479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGT 558 (578)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECC
T ss_conf 99999999999999749999999786545799999999999999808997999831789997199899998998999888
Q ss_pred HHHHHHHCCCHHHHHHHHHH
Q ss_conf 67895100524899999841
Q 001411 1055 HEQLLRKENGIYKQLIRLQQ 1074 (1082)
Q Consensus 1055 ~~eLl~~~~~~y~~l~~~~~ 1074 (1082)
|+|+++ .++.|++++..|.
T Consensus 559 ~~el~~-~~~~~~~~~~~q~ 577 (578)
T 4a82_A 559 HRELIA-KQGAYEHLYSIQN 577 (578)
T ss_dssp HHHHHH-TTSHHHHHHTTTT
T ss_pred HHHHHH-CCCHHHHHHHHHC
T ss_conf 999985-8838999998506
No 8
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=703.94 Aligned_cols=579 Identities=35% Similarity=0.524 Sum_probs=498.0
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999982013579999999999987678799999999999750999345674898999999999999999999999999
Q 001411 498 IWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFY 577 (1082)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (1082)
.++++.+.++.++.+.+..+...+.++..++.++.+..+++................+..+++++.++..++.++..+..
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (595)
T 2yl4_A 7 ARKLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLM 86 (595)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998878999999999999999999999999999999997357402667999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998199764334677745899999842999999998899999999999999999999997889
Q 001411 578 TLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRL 657 (1082)
Q Consensus 578 ~~~~~~~~~~lr~~~~~~i~~~~~~~f~~~~~~~G~l~~r~~~Di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 657 (1082)
.+.+.++..++|.++++++++.|++||+. +++|++++|+++|++.++..+...+..++.+++.+++.++++++++|.+
T Consensus 87 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 164 (595)
T 2yl4_A 87 QTSGQRIVNRLRTSLFSSILRQEVAFFDK--TRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNL 164 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHHH--SCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998199999777--9848899999999999999999999999999999999999999981999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999984689999999999999999997017999971717999999999983699999999999
Q 001411 658 AAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHI 737 (1082)
Q Consensus 658 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (1082)
++++++.+|+..++.....+..++..+..++...+..+.+.|.++|+++||+|++++.+.++|.+..++..+...+....
T Consensus 165 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 244 (595)
T 2yl4_A 165 ATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFA 244 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998119999983756999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999999999999999999999981798988899999999999999999998899999999989999996423356
Q 001411 738 SGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTA 817 (1082)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (1082)
..+...+..++..+..++++|+|++++..|.+++|.+++++.+......|+..+...+..+..+..+..|+.++++.+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~ 324 (595)
T 2yl4_A 245 RAGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPK 324 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999999986997899999999999999999999999999999999999999999838976
Q ss_pred CCCCCCCCCCCCCCCCC-EEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 79999898544565564-99986888889999965301203876289589998389997788999881326698418999
Q 001411 818 IQPDDPASKEVTEIKGN-IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLI 896 (1082)
Q Consensus 818 ~~~~~~~~~~~~~~~~~-I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~iaIvG~SGsGKSTL~~lL~gl~~p~~G~I~i 896 (1082)
.++.. ...+..+..+. |+++||+|+|+.+++.++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.+
T Consensus 325 ~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~ 403 (595)
T 2yl4_A 325 LPFNE-GVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISL 403 (595)
T ss_dssp SCSSC-SBCCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEE
T ss_pred CCCCC-CCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 67777-87777678998389998899858998881201127998499889998999997999999982585789837999
Q ss_pred CCCCCCCCCHHHHHCCEEEECCCCCCCCCCHHHHHCCCCCC---CCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 99507999978873332888366766642478883239988---799999999999008899962746544422699998
Q 001411 897 DGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNED---ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQ 973 (1082)
Q Consensus 897 dg~di~~~~~~~lr~~i~~vpQ~~~lf~gTIreNl~~~~~~---~~d~ei~~a~~~a~l~~~I~~lp~gldt~i~e~g~~ 973 (1082)
||+|+++++.+.+|++++||||+|.+|++||+||+.++.+. .++++++++++.++++++++++|+|+||.++++|.+
T Consensus 404 ~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~ 483 (595)
T 2yl4_A 404 DGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVL 483 (595)
T ss_dssp TTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCC
T ss_pred CCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99981117999997322898368832687799998405877665689999999998697999974732013501688786
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEEC
Q ss_conf 99249999999999703998778517778989798999999999861896499980692255305889999598898825
Q 001411 974 LSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIG 1053 (1082)
Q Consensus 974 LSgGQkQrlaLARAll~~p~ILiLDEpTS~LD~~te~~I~~~L~~~~~~~TvI~IsHrl~~i~~~DrI~vl~~G~ive~G 1053 (1082)
||||||||++||||++++|++++||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|++++.|
T Consensus 484 LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 563 (595)
T 2yl4_A 484 LSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYG 563 (595)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 89999999999999975999999988666899899999999999996599799994687899759989999899899978
Q ss_pred CHHHHHHHCCCHHHHHHHHHHCCCCC
Q ss_conf 96789510052489999984123986
Q 001411 1054 SHEQLLRKENGIYKQLIRLQQDKNPE 1079 (1082)
Q Consensus 1054 ~~~eLl~~~~~~y~~l~~~~~~~~~~ 1079 (1082)
+|+|++++.++.|+++++.|.....+
T Consensus 564 ~~~~l~~~~~~~~~~~~~~q~~~~~~ 589 (595)
T 2yl4_A 564 KHEELLSKPNGIYRKLMNKQSFISAA 589 (595)
T ss_dssp CSCC------C---------------
T ss_pred CHHHHHHCCCHHHHHHHHHHHCCCCC
T ss_conf 89999747872999999974302541
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=698.01 Aligned_cols=567 Identities=28% Similarity=0.439 Sum_probs=496.3
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999982013579999999999987678799999999999750999345674898999999999999999999999999
Q 001411 498 IWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFY 577 (1082)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (1082)
.++++.+.++.++.+.+..+...+.++..++.++.+..+++....... . .....+..+++++.++..++.++..+..
T Consensus 13 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (582)
T 3b5x_A 13 FKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAE--S-NFLRILPFMILGLMFVRGLSGFASSYCL 89 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999988999999999999999999999999999999999864686--6-7999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998199764334677745899999842999999998899999999999999999999997889
Q 001411 578 TLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRL 657 (1082)
Q Consensus 578 ~~~~~~~~~~lr~~~~~~i~~~~~~~f~~~~~~~G~l~~r~~~Di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 657 (1082)
.+.+.++..++|.++++++++.|+.||+ +.++|++++|+++|++.+++++...+..++.+++.+++.++++++++|.+
T Consensus 90 ~~~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 167 (582)
T 3b5x_A 90 SWVSGNVVMQMRRRLFNHFMHMPVRFFD--QESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQL 167 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999869999977--89878999999988999999999999999999999999999999982999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999984689999999999999999997017999971717999999999983699999999999
Q 001411 658 AAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHI 737 (1082)
Q Consensus 658 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (1082)
++++++.+|+.+++.....+..++..+..++...+..+.+.|.++|+++||+|++++.+.++|.+..++..+...+..+.
T Consensus 168 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 247 (582)
T 3b5x_A 168 SLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSA 247 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999519999970875999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999999999999999999999981798988899999999999999999998899999999989999996423356
Q 001411 738 SGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTA 817 (1082)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (1082)
..+...+..++..+..+++++++++++..|.+++|.+++++.+......|+..+...+..+..+..+.+|+.++++.+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~ 327 (582)
T 3b5x_A 248 QSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETE 327 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999999985998899999999999999999999999999999999999999999758976
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 79999898544565564999868888899999653012038762895899983899977889998813266984189999
Q 001411 818 IQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLID 897 (1082)
Q Consensus 818 ~~~~~~~~~~~~~~~~~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~iaIvG~SGsGKSTL~~lL~gl~~p~~G~I~id 897 (1082)
.++ ...+.++..+.|+++||+|+|+.+ +.++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.+|
T Consensus 328 ~~~---~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~ 403 (582)
T 3b5x_A 328 RDN---GKYEAERVNGEVDVKDVTFTYQGK-EKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLD 403 (582)
T ss_pred CCC---CCCCCCCCCCEEEEEEEEEECCCC-CCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEC
T ss_conf 777---777777788828999989972899-8654004169987999899989999979999999965778999879899
Q ss_pred CCCCCCCCHHHHHCCEEEECCCCCCCCCCHHHHHCCCC-CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCH
Q ss_conf 95079999788733328883667666424788832399-88799999999999008899962746544422699998992
Q 001411 898 GYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGN-EDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSG 976 (1082)
Q Consensus 898 g~di~~~~~~~lr~~i~~vpQ~~~lf~gTIreNl~~~~-~~~~d~ei~~a~~~a~l~~~I~~lp~gldt~i~e~g~~LSg 976 (1082)
|+|+++++.+.+|++++||||+|.+|++|++||+.++. ++.++++++++++.++++++++++|+|+||.++++|.+|||
T Consensus 404 g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSg 483 (582)
T 3b5x_A 404 GHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSG 483 (582)
T ss_pred CEEHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCH
T ss_conf 99856388999964858982799053102999985668899999999999998798999984765334510688884799
Q ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECCHH
Q ss_conf 49999999999703998778517778989798999999999861896499980692255305889999598898825967
Q 001411 977 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHE 1056 (1082)
Q Consensus 977 GQkQrlaLARAll~~p~ILiLDEpTS~LD~~te~~I~~~L~~~~~~~TvI~IsHrl~~i~~~DrI~vl~~G~ive~G~~~ 1056 (1082)
|||||++||||++++|++++||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|++++.|+|+
T Consensus 484 Gq~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~ 563 (582)
T 3b5x_A 484 GQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHA 563 (582)
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHH
T ss_conf 99999999999974999999978544689999999999999972899899993688999819989999899899977899
Q ss_pred HHHHHCCCHHHHHHHHHH
Q ss_conf 895100524899999841
Q 001411 1057 QLLRKENGIYKQLIRLQQ 1074 (1082)
Q Consensus 1057 eLl~~~~~~y~~l~~~~~ 1074 (1082)
++++ .++.|+++++.|.
T Consensus 564 ~l~~-~~~~~~~~~~~q~ 580 (582)
T 3b5x_A 564 DLLA-QDGAYAQLHRIQF 580 (582)
T ss_pred HHHH-CCCHHHHHHHHHH
T ss_conf 9984-8858999999861
No 10
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=697.72 Aligned_cols=568 Identities=30% Similarity=0.480 Sum_probs=498.0
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 69999998201357999999999998767879999999999975099934567489899999999999999999999999
Q 001411 497 SIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYF 576 (1082)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (1082)
..++++.+.++.++.+.+..+...+.++.....++.+..+++...... .. .....+..+++++.++..++.++..+.
T Consensus 12 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (582)
T 3b60_A 12 TFRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKT--DR-SVLLWMPLVVIGLMILRGITSYISSYC 88 (582)
T ss_dssp HHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTST--TH-HHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999999884368--65-799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999819976433467774589999984299999999889999999999999999999999788
Q 001411 577 YTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWR 656 (1082)
Q Consensus 577 ~~~~~~~~~~~lr~~~~~~i~~~~~~~f~~~~~~~G~l~~r~~~Di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (1082)
..+.+.++..++|.++++++++.|+.||+. .++|++++|+++|++.++.++...+..++.+++.+++.+++++.++|.
T Consensus 89 ~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 166 (582)
T 3b60_A 89 ISWVSGKVVMTMRRRLFGHMMGMPVAFFDK--QSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQ 166 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCSTHHHH--SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999998099999788--986589999998799999999999999999999999999999998099
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998468999999999999999999701799997171799999999998369999999999
Q 001411 657 LAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGH 736 (1082)
Q Consensus 657 l~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (1082)
+++++++++|+..++.....+..++..+...+...+..+.+.|.++|+++||+|++++.+.++|.+..++..+...+..+
T Consensus 167 l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 246 (582)
T 3b60_A 167 LSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVS 246 (582)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999961999998376899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999999999999999998179898889999999999999999999889999999998999999642335
Q 001411 737 ISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKT 816 (1082)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (1082)
...+...+..++..+..++++|++++++..|.+++|.+++++.+......|+..+...+..+..+..+..|+.++++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 326 (582)
T 3b60_A 247 ASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQ 326 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999999998499989999999999999999999999999999999999999999975998
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 67999989854456556499986888889999965301203876289589998389997788999881326698418999
Q 001411 817 AIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLI 896 (1082)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~iaIvG~SGsGKSTL~~lL~gl~~p~~G~I~i 896 (1082)
+.++ ...+.++..+.|+++||+|+|+.+ +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+
T Consensus 327 ~~~~---~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~ 402 (582)
T 3b60_A 327 EKDE---GKRVIDRATGDLEFRNVTFTYPGR-EVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILM 402 (582)
T ss_dssp SCCC---CCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEE
T ss_pred CCCC---CCCCCCCCCCCEEEEEEEEECCCC-CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEE
T ss_conf 7667---777777888847999889973999-974415615997699989998999998999999986106898976979
Q ss_pred CCCCCCCCCHHHHHCCEEEECCCCCCCCCCHHHHHCCCC-CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 995079999788733328883667666424788832399-8879999999999900889996274654442269999899
Q 001411 897 DGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGN-EDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 975 (1082)
Q Consensus 897 dg~di~~~~~~~lr~~i~~vpQ~~~lf~gTIreNl~~~~-~~~~d~ei~~a~~~a~l~~~I~~lp~gldt~i~e~g~~LS 975 (1082)
||+|+++++...+|++++||||+|.+|++|++||+.++. ++.++++++++++.++++++++++|+|+||.++++|.+||
T Consensus 403 ~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LS 482 (582)
T 3b60_A 403 DGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLS 482 (582)
T ss_dssp TTEETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSC
T ss_pred CCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 99982306999999608088068747787899998545999989999999999849799998450411451147988789
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECCH
Q ss_conf 24999999999970399877851777898979899999999986189649998069225530588999959889882596
Q 001411 976 GGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSH 1055 (1082)
Q Consensus 976 gGQkQrlaLARAll~~p~ILiLDEpTS~LD~~te~~I~~~L~~~~~~~TvI~IsHrl~~i~~~DrI~vl~~G~ive~G~~ 1055 (1082)
||||||++||||++++|++++||||||+||+++++.+++.+++..+++|+|+||||+++++.||+|++|++|++++.|+|
T Consensus 483 gGq~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~ 562 (582)
T 3b60_A 483 GGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTH 562 (582)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCH
T ss_conf 99999999999997289989997865557989999999999999679979999454778985998999978889884589
Q ss_pred HHHHHHCCCHHHHHHHHHH
Q ss_conf 7895100524899999841
Q 001411 1056 EQLLRKENGIYKQLIRLQQ 1074 (1082)
Q Consensus 1056 ~eLl~~~~~~y~~l~~~~~ 1074 (1082)
+++++ .++.|+++++.|.
T Consensus 563 ~~l~~-~~~~~~~~~~~q~ 580 (582)
T 3b60_A 563 SELLA-QHGVYAQLHKMQF 580 (582)
T ss_dssp HHHHH-HTSSHHHHHHHTC
T ss_pred HHHHH-CCCHHHHHHHHHC
T ss_conf 99987-6988999999750
Done!