BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001412
(1082 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 156/300 (52%), Gaps = 8/300 (2%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
K SL D + + L + + L+ R + + ++K K+ V L K+V+ ++ LM
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRL-KQVEHTNDERLML 60
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP--LDEQSARFCAASVVAALE 882
S+ + ++ T D+ ++++ L S+L A+F AA V ALE
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALE 120
Query: 883 DLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKG 942
LH + ++YR + P+ ++LDK+GH+++ DF F K + + T+ +CG DY+APE+V K
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP-DVTYXLCGTPDYIAPEVVSTKP 179
Query: 943 HGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKL 1002
+ + DWW+ G+LIY ML G PF + + + KI +L P + + DLL++L
Sbjct: 180 YNKSIDWWSFGILIYEMLAGYTPF--YDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRL 237
Query: 1003 LVVDENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSRISQHLDSHFEDSP 1060
+ D + RLG+ G VK HPWF++V W+ + P+E + Q S F+ P
Sbjct: 238 ITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYP 297
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent
Protein Kinase And Adenosine Further Defines
Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+ A DWWAL
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 225 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+ A DWWAL
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 225 GVLIYQMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+ A DWWAL
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 225 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 283 NLPNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+ A DWWAL
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 225 GVLIYEMAAGYPPF--FADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-dependent
Protein Kinase Complexed With A Phosphorylated Substrate
Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase Catalytic
Subunit Alpha In Complex With Peptide Inhibitor Pki Alpha
(6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+ A DWWAL
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 225 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 106
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+ A DWWAL
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 226 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 100
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 160
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+ A DWWAL
Sbjct: 161 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 219
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 220 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 277
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 278 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 308
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+ A DWWAL
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 225 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 92
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 152
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+ A DWWAL
Sbjct: 153 DLKPENLLIDEQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 211
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 212 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 269
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 270 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 300
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The Inhibited
State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+ A DWWAL
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 225 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 143/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+ A DWWAL
Sbjct: 166 DLKPENLIIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIIISKGYNKAVDWWAL 224
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 225 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To (s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To (R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 143/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+T+CG +YLAPEI+ KG+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWTLCGTPEYLAPEIILSKGYNK 218
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With A
Peptide Inhibitor And Detergent
Length = 350
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+ A DWWAL
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 225 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt Inhibitors
Length = 336
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 143/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 86 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 144
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+T+CG +YLAPEI+ KG+
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWTLCGTPEYLAPEIILSKGYNK 203
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 204 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 261
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 262 DLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAP 299
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein
Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 126
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+ A DWWAL
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 246 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 303
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 304 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 334
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 143/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+ A DWWAL
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 225 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of
Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 143/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 143/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 93 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 151
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 210
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 211 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 268
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 269 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 306
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ LM+D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 126
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G T+T+CG +YLAPEI+ KG+ A DWWAL
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKG-ATWTLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 246 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 303
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 304 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 334
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A Small
Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 143/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 218
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 143/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 121 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 238
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 239 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 296
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 297 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 334
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 143/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 218
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 143/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 93 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 151
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 210
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 211 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 268
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 269 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 306
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 27
Length = 351
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 143/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ LM+D+ G++++ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 218
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H89 Protein Kinase Inhibitor
N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H7 Protein Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H8 Protein Kinase Inhibitor
[n-(2-Methylamino)ethyl]-5- Isoquinolinesulfonamide
Length = 350
Score = 156 bits (394), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 156 bits (394), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAP I+ KG+ A DWWAL
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPAIILSKGYNKAVDWWAL 224
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 225 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase (Pka)
In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 155 bits (393), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1012
Length = 351
Score = 155 bits (393), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 218
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ LM+D+ G++++ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective Inhibitor
Length = 350
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A-
443654
Length = 351
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 218
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+ A DWWAL
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD G
Sbjct: 225 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKAFG 282
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ + G +YLAPEI+ KG+ A DWWAL
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLAGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 225 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase
A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase
A (Pka)
Length = 350
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ LM+D+ G++++ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++Q+ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 218
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G + H WF DW I + P
Sbjct: 277 DLTKRFGNLKNGVNDIXNHKWFATTDWIAIYQRKVEAP 314
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5-
Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)
Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-(5-Methyl-
1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With (1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
+ ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 -FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ LM+D+ G++++ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 218
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
+ ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 -FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ LM+D+ G++++ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 218
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
Length = 350
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ + G +YLAPEI+ KG+ A DWWAL
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLXGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 225 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 8/271 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWAL 952
+ P+ L++D+ G++Q+ DF F K + G RT+ +CG + LAPEI+ KG+ A DWWAL
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWXLCGTPEALAPEIILSKGYNKAVDWWAL 224
Query: 953 GVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
GVLIY M G PF + + I I KI G++ P + S + DLL LL VD R G
Sbjct: 225 GVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 1013 S--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+ G +K H WF DW I + P
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-Phenyl-C-(4-(
9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (1-(9h-Purin-6-
Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (1-(9h-Purin-6-
Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
+ ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 -FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ LM+D+ G++++ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 218
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N-
Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 141/278 (50%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ LM+D+ G++Q+ DF K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E + L + + LV +++ N ++K KQKV L + L EK + ++V+
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + ++L + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++++ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 218
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K + + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++++ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 153 bits (387), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K + + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++++ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y-
27632
Length = 350
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K + + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ L++D+ G++++ DF F K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 152 bits (385), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 141/278 (50%), Gaps = 8/278 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
++YR + P+ LM+D+ G++++ DF K + G RT+ +CG +YLAPEI+ KG+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG-RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVV 1005
A DWWALGVLIY M G PF + + I I KI G++ P + S + DLL LL V
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 1006 DENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
D R G+ G +K H WF DW I + P
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 155/326 (47%), Gaps = 19/326 (5%)
Query: 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLM 823
AKV++ D ++ K L ++ LV + + + ++K K+ + + + E ++
Sbjct: 3 AKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 62
Query: 824 KSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP----LDEQSARFCAASVVA 879
++ A H L A H E+ ARF A +V+
Sbjct: 63 QNTRHPFLTA---LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS 119
Query: 880 ALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GLSGNRTF-TICGMADYLAPEI 937
ALE LH R V+YR + + LMLDK GH+++ DF K G+S T T CG +YLAPE+
Sbjct: 120 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 179
Query: 938 VQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVD 997
++ +G A DWW LGV++Y M+ G +PF + + + I ++ P+ LSPEA
Sbjct: 180 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKS 237
Query: 998 LLTKLLVVDENTRLGSQGPTSVK---THPWFRDVDWKGIAEST--SPVPHEIMSRI-SQH 1051
LL LL D RLG GP+ K H +F ++W+ + + P ++ S + +++
Sbjct: 238 LLAGLLKKDPKQRLGG-GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRY 296
Query: 1052 LDSHFEDSPVFQASPPRDVEELNVPE 1077
D F + +PP + L + E
Sbjct: 297 FDDEFTAQSI-TITPPDRYDSLGLLE 321
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 104/171 (60%), Gaps = 10/171 (5%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG--LSGNRTF 924
E +A F A + AL LH++G++YR + P+ +ML+ GH++L DF K G T
Sbjct: 120 EDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179
Query: 925 TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIAKG 983
T CG +Y+APEI+ GH A DWW+LG L+Y ML G PF G R+ ID KI K
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID---KILKC 236
Query: 984 QLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGP---TSVKTHPWFRDVDWK 1031
+L+LP L+ EA DLL KLL + +RLG+ GP V+ HP+FR ++W+
Sbjct: 237 KLNLPPYLTQEARDLLKKLLKRNAASRLGA-GPGDAGEVQAHPFFRHINWE 286
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 122/220 (55%), Gaps = 16/220 (7%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GLS-GNR 922
L E+ ARF +A + AL LH+RG++YR + D ++LD GH++L D+ K GL G+
Sbjct: 150 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 209
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF---GSW----RESEID 975
T T CG +Y+APEI++G+ +G + DWWALGVL++ M+ G PF GS + +E
Sbjct: 210 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 269
Query: 976 IVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQ---GPTSVKTHPWFRDVDWKG 1032
+ I + Q+ +P++LS +A +L L D RLG G ++ HP+FR+VDW
Sbjct: 270 LFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDM 329
Query: 1033 IAES--TSPVPHEIMSRIS-QHLDSHFEDSPVFQASPPRD 1069
+ + P I + DS F + PV Q P D
Sbjct: 330 MEQKQVVPPFKPNISGEFGLDNFDSQFTNEPV-QLXPDDD 368
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 19/325 (5%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
KV++ D ++ K L ++ LV + + + ++K K+ + + + E +++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP----LDEQSARFCAASVVAA 880
+ A H L A H E+ ARF A +V+A
Sbjct: 61 NTRHPFLTA---LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 881 LEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GLSGNRTF-TICGMADYLAPEIV 938
LE LH R V+YR + + LMLDK GH+++ DF K G+S T T CG +YLAPE++
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 177
Query: 939 QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDL 998
+ +G A DWW LGV++Y M+ G +PF + + + I ++ P+ LSPEA L
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSL 235
Query: 999 LTKLLVVDENTRLGSQGPTSVK---THPWFRDVDWKGIAEST--SPVPHEIMSRI-SQHL 1052
L LL D RLG GP+ K H +F ++W+ + + P ++ S + +++
Sbjct: 236 LAGLLKKDPKQRLGG-GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYF 294
Query: 1053 DSHFEDSPVFQASPPRDVEELNVPE 1077
D F + +PP + L + E
Sbjct: 295 DDEFTAQSI-TITPPDRYDSLGLLE 318
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 149/316 (47%), Gaps = 18/316 (5%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
KV++ D ++ K L ++ LV + + + ++K K+ + + + E +++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP----LDEQSARFCAASVVAA 880
+ A H L A H E+ ARF A +V+A
Sbjct: 61 NTRHPFLTA---LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 881 LEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GLSGNRTF-TICGMADYLAPEIV 938
LE LH R V+YR + + LMLDK GH+++ DF K G+S T T CG +YLAPE++
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 177
Query: 939 QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDL 998
+ +G A DWW LGV++Y M+ G +PF + + + I ++ P+ LSPEA L
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSL 235
Query: 999 LTKLLVVDENTRLGSQGPTSVK---THPWFRDVDWKGIAEST--SPVPHEIMSRI-SQHL 1052
L LL D RLG GP+ K H +F ++W+ + + P ++ S + +++
Sbjct: 236 LAGLLKKDPKQRLGG-GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYF 294
Query: 1053 DSHFEDSPVFQASPPR 1068
D F + P R
Sbjct: 295 DDEFTAQSITITPPDR 310
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 103/171 (60%), Gaps = 10/171 (5%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG--LSGNRTF 924
E +A F A + AL LH++G++YR + P+ +ML+ GH++L DF K G T
Sbjct: 120 EDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179
Query: 925 TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIAKG 983
CG +Y+APEI+ GH A DWW+LG L+Y ML G PF G R+ ID KI K
Sbjct: 180 XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID---KILKC 236
Query: 984 QLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGP---TSVKTHPWFRDVDWK 1031
+L+LP L+ EA DLL KLL + +RLG+ GP V+ HP+FR ++W+
Sbjct: 237 KLNLPPYLTQEARDLLKKLLKRNAASRLGA-GPGDAGEVQAHPFFRHINWE 286
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 19/325 (5%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
KV++ D ++ K L ++ LV + + + ++K K+ + + + E +++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP----LDEQSARFCAASVVAA 880
+ A H L A H E+ ARF A +V+A
Sbjct: 61 NTRHPFLTA---LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 881 LEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GLSGNRTFT-ICGMADYLAPEIV 938
LE LH R V+YR + + LMLDK GH+++ DF K G+S T CG +YLAPE++
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 939 QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDL 998
+ +G A DWW LGV++Y M+ G +PF + + + I ++ P+ LSPEA L
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSL 235
Query: 999 LTKLLVVDENTRLGSQGPTSVK---THPWFRDVDWKGIAEST--SPVPHEIMSRI-SQHL 1052
L LL D RLG GP+ K H +F ++W+ + + P ++ S + +++
Sbjct: 236 LAGLLKKDPKQRLGG-GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYF 294
Query: 1053 DSHFEDSPVFQASPPRDVEELNVPE 1077
D F + +PP + L + E
Sbjct: 295 DDEFTAQSI-TITPPDRYDSLGLLE 318
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With
Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 132 bits (333), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 19/325 (5%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
KV++ D ++ K L ++ LV + + + ++K K+ + + + E +++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP----LDEQSARFCAASVVAA 880
+ A H L A H E+ ARF A +V+A
Sbjct: 61 NTRHPFLTA---LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 881 LEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GLSGNRTF-TICGMADYLAPEIV 938
LE LH R V+YR + + LMLDK GH+++ DF K G+S T CG +YLAPE++
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 939 QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDL 998
+ +G A DWW LGV++Y M+ G +PF + + + I ++ P+ LSPEA L
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSL 235
Query: 999 LTKLLVVDENTRLGSQGPTSVK---THPWFRDVDWKGIAEST--SPVPHEIMSRI-SQHL 1052
L LL D RLG GP+ K H +F ++W+ + + P ++ S + +++
Sbjct: 236 LAGLLKKDPKQRLGG-GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYF 294
Query: 1053 DSHFEDSPVFQASPPRDVEELNVPE 1077
D F + +PP + L + E
Sbjct: 295 DDEFTAQSI-TITPPDRYDSLGLLE 318
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5-
Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)
Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor A-
443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of 4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 132 bits (333), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 19/325 (5%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
KV++ D ++ K L ++ LV + + + ++K K+ + + + E +++
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP----LDEQSARFCAASVVAA 880
+ A H L A H E+ ARF A +V+A
Sbjct: 66 NTRHPFLTA---LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 122
Query: 881 LEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GLSGNRTFT-ICGMADYLAPEIV 938
LE LH R V+YR + + LMLDK GH+++ DF K G+S T CG +YLAPE++
Sbjct: 123 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 182
Query: 939 QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDL 998
+ +G A DWW LGV++Y M+ G +PF + + + I ++ P+ LSPEA L
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSL 240
Query: 999 LTKLLVVDENTRLGSQGPTSVK---THPWFRDVDWKGIAEST--SPVPHEIMSRI-SQHL 1052
L LL D RLG GP+ K H +F ++W+ + + P ++ S + +++
Sbjct: 241 LAGLLKKDPKQRLGG-GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYF 299
Query: 1053 DSHFEDSPVFQASPPRDVEELNVPE 1077
D F + +PP + L + E
Sbjct: 300 DDEFTAQSI-TITPPDRYDSLGLLE 323
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 121/220 (55%), Gaps = 16/220 (7%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GLS-GNR 922
L E+ ARF +A + AL LH+RG++YR + D ++LD GH++L D+ K GL G+
Sbjct: 103 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 162
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF---GSW----RESEID 975
T CG +Y+APEI++G+ +G + DWWALGVL++ M+ G PF GS + +E
Sbjct: 163 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 222
Query: 976 IVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQ---GPTSVKTHPWFRDVDWKG 1032
+ I + Q+ +P++LS +A +L L D RLG G ++ HP+FR+VDW
Sbjct: 223 LFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDM 282
Query: 1033 IAES--TSPVPHEIMSRIS-QHLDSHFEDSPVFQASPPRD 1069
+ + P I + DS F + PV Q P D
Sbjct: 283 MEQKQVVPPFKPNISGEFGLDNFDSQFTNEPV-QLXPDDD 321
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 148/316 (46%), Gaps = 18/316 (5%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
KV++ D ++ K L ++ LV + + + ++K K+ + + + E +++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP----LDEQSARFCAASVVAA 880
+ A H L A H E+ ARF A +V+A
Sbjct: 61 NTRHPFLTA---LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 881 LEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GLSGNRTFT-ICGMADYLAPEIV 938
LE LH R V+YR + + LMLDK GH+++ DF K G+S T CG +YLAPE++
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 939 QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDL 998
+ +G A DWW LGV++Y M+ G +PF + + + I ++ P+ LSPEA L
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSL 235
Query: 999 LTKLLVVDENTRLGSQGPTSVK---THPWFRDVDWKGIAEST--SPVPHEIMSRI-SQHL 1052
L LL D RLG GP+ K H +F ++W+ + + P ++ S + +++
Sbjct: 236 LAGLLKKDPKQRLGG-GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYF 294
Query: 1053 DSHFEDSPVFQASPPR 1068
D F + P R
Sbjct: 295 DDEFTAQSITIXPPDR 310
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 121/220 (55%), Gaps = 16/220 (7%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GL-SGNR 922
L E+ ARF +A + AL LH+RG++YR + D ++LD GH++L D+ K GL G+
Sbjct: 107 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 166
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF---GSW----RESEID 975
T CG +Y+APEI++G+ +G + DWWALGVL++ M+ G PF GS + +E
Sbjct: 167 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 226
Query: 976 IVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQ---GPTSVKTHPWFRDVDWKG 1032
+ I + Q+ +P++LS +A +L L D RLG G ++ HP+FR+VDW
Sbjct: 227 LFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDM 286
Query: 1033 IAES--TSPVPHEIMSRIS-QHLDSHFEDSPVFQASPPRD 1069
+ + P I + DS F + PV Q P D
Sbjct: 287 MEQKQVVPPFKPNISGEFGLDNFDSQFTNEPV-QLXPDDD 325
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 140/285 (49%), Gaps = 9/285 (3%)
Query: 753 KPAKSIDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGK 812
K I ++S ++ + + E+ + L ++ L ++++ + ++K K +
Sbjct: 7 KEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDD 66
Query: 813 EVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP--LDEQSA 870
+ EK ++ + Q+ C ++ L + DE A
Sbjct: 67 VECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARA 126
Query: 871 RFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GL-SGNRTFTICG 928
RF AA +++AL LH +G++YR + D ++LD GH +L DF K G+ +G T T CG
Sbjct: 127 RFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCG 186
Query: 929 MADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLP 988
DY+APEI+Q +G A DWWA+GVL+Y ML G PF + E+E D+ I ++ P
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA--ENEDDLFEAILNDEVVYP 244
Query: 989 QNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDW 1030
L +A +L + + RLGS G ++ HP+F+++DW
Sbjct: 245 TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDW 289
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 129 bits (324), Expect = 9e-30, Method: Composition-based stats.
Identities = 83/279 (29%), Positives = 136/279 (48%), Gaps = 24/279 (8%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQ-VLKEKNLM 823
K+ + D E K L ++ L + + F ++K K+ V + +V+ + EK ++
Sbjct: 14 KLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKAL-KKDVVLMDDDVECTMVEKRVL 72
Query: 824 KSVSPSACVPQILCT---------CADSMHAGLLLNTYLACPLASILHTPLDEQSARFCA 874
+ + CT + ++ G L+ +C D A F A
Sbjct: 73 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-------HKFDLSRATFYA 125
Query: 875 ASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG--LSGNRTFTICGMADY 932
A ++ L+ LH +G++YR + D ++LDK GH+++ DF K L +T CG DY
Sbjct: 126 AEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDY 185
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLS 992
+APEI+ G+ + + DWW+ GVL+Y ML G+ PF E E + I P+ L
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE--LFHSIRMDNPFYPRWLE 243
Query: 993 PEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
EA DLL KL V + RLG +G ++ HP FR+++W+
Sbjct: 244 KEAKDLLVKLFVREPEKRLGVRG--DIRQHPLFREINWE 280
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 112/210 (53%), Gaps = 17/210 (8%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG------ 920
E+ +F A + AL+ LH G++YR + P+ ++LD+ GH++L DF GLS
Sbjct: 125 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDF----GLSKESIDHE 180
Query: 921 NRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
+ ++ CG +Y+APE+V +GH +ADWW+ GVL++ ML G +PF E + I
Sbjct: 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE--TMTMI 238
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTS 1038
K +L +PQ LSPEA LL L + RLG+ G +K H +F +DW +
Sbjct: 239 LKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREI 298
Query: 1039 PVPHEIMSRISQHLDSHFEDSPVFQASPPR 1068
P + + + D+ + D P F A P+
Sbjct: 299 HPPFKPATGRPE--DTFYFD-PEFTAKTPK 325
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 13/189 (6%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GLS-GNR 922
L E+ ARF +A + AL LH+RG++YR + D ++LD GH++L D+ K GL G+
Sbjct: 118 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 177
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF---GSW----RESEID 975
T CG +Y+APEI++G+ +G + DWWALGVL++ M+ G PF GS + +E
Sbjct: 178 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 237
Query: 976 IVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG---SQGPTSVKTHPWFRDVDWKG 1032
+ I + Q+ +P+++S +A +L L D RLG G ++ HP+FR+VDW
Sbjct: 238 LFQVILEKQIRIPRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWD- 296
Query: 1033 IAESTSPVP 1041
+ E VP
Sbjct: 297 MMEQKQVVP 305
>pdb|2QVS|B Chain B, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
Length = 310
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 139/302 (46%), Gaps = 24/302 (7%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
H KT E+ ++ A D LF+ L Q +LD M V+ + V+ QG +GD FYV+
Sbjct: 26 HPKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFEKIVKTDEHVIDQGDDGDNFYVI 85
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
G ++++ T++ + V + R SFGELALMYN P A++ A + G LW L
Sbjct: 86 ERGTYDILVTKDNQTRSVGQYDNR------GSFGELALMYNTPRAATIIATSEGSLWGLD 139
Query: 581 REDFRGILMSEFSNLSSL--KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNE 638
R FR I++ + + + SV L L + + + D + E + G+ I+ E
Sbjct: 140 RVTFRRIIVKNNAKKRKMFESFIESVPLFKSLEMSERMKIVDVIGEKIYKDGERIIAQGE 199
Query: 639 GVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEW 698
+ YII+ G+V I + SN N G Q + K G YFGE
Sbjct: 200 KADSFYIIESGEVSILIRSKTKSNKN------------GGNQEVEIAHCHK--GQYFGEL 245
Query: 699 TLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSI 758
L+ + +A V DV C ++ + F+ ++GP I +N Y + K ++
Sbjct: 246 ALVTNKPRAASAYGVGDVKCLVMDVQAFERLLGPCMDIMK--RNISHYEEQLVKMFGSNL 303
Query: 759 DI 760
D+
Sbjct: 304 DL 305
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 98/172 (56%), Gaps = 14/172 (8%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG------ 920
E+ +F A + AL+ LH G++YR + P+ ++LD+ GH++L DF GLS
Sbjct: 125 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDF----GLSKESIDHE 180
Query: 921 NRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
+ ++ CG +Y+APE+V +GH +ADWW+ GVL++ ML G +PF E + I
Sbjct: 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE--TMTMI 238
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS--QGPTSVKTHPWFRDVDW 1030
K +L +PQ LSPEA LL L + RLG+ G +K H +F +DW
Sbjct: 239 LKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDW 290
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With Flavonoid
Glycoside Quercitrin
Length = 305
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 98/172 (56%), Gaps = 14/172 (8%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG------ 920
E+ +F A + AL+ LH G++YR + P+ ++LD+ GH++L DF GLS
Sbjct: 126 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDF----GLSKESIDHE 181
Query: 921 NRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
+ ++ CG +Y+APE+V +GH +ADWW+ GVL++ ML G +PF E + I
Sbjct: 182 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE--TMTMI 239
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS--QGPTSVKTHPWFRDVDW 1030
K +L +PQ LSPEA LL L + RLG+ G +K H +F +DW
Sbjct: 240 LKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDW 291
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 160/310 (51%), Gaps = 29/310 (9%)
Query: 784 EIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843
E+ LV + S+ ++K SK ++ +E+++M + + S V Q+ C D
Sbjct: 90 EVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQLFCAFQDDK 148
Query: 844 HAGLLLNTYLACPLASIL-HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
+ +++ L +++ + + E+ A+F A VV AL+ +H G+++R V PD ++LD
Sbjct: 149 YLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD 208
Query: 903 KSGHLQLVDFRFGKGLSGNRTF-----TICGMADYLAPEIVQGKG----HGLAADWWALG 953
K GHL+L D FG + + T T G DY++PE+++ +G +G DWW++G
Sbjct: 209 KHGHLKLAD--FGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 266
Query: 954 VLIYFMLQGEMPFGSWRESEIDIVAKIA--KGQLSLPQN--LSPEAVDLLTKLLVVDENT 1009
V ++ ML G+ PF + +S + +KI K L P++ +S A +L+ L D
Sbjct: 267 VFLFEMLVGDTPF--YADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFL-TDREV 323
Query: 1010 RLGSQGPTSVKTHPWFRD--VDWKGIAESTSPVPHEIMSRISQHLDSHFEDSPVFQASPP 1067
RLG G +K HP+F++ +W I E+ +PV E+ S I S+F+D
Sbjct: 324 RLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDS---SNFDDI----EDDK 376
Query: 1068 RDVEELNVPE 1077
DVE +P+
Sbjct: 377 GDVETFPIPK 386
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 151/316 (47%), Gaps = 21/316 (6%)
Query: 752 KKPAKSIDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLG 811
K+P+ ++D +V LTD + L ++ L + +E ++K K V
Sbjct: 7 KQPSNNLD-----RVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDD 61
Query: 812 KEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLD 866
+ EK ++ + + Q L +C ++ + Y+ +++
Sbjct: 62 DVECTMVEKRVLALLDKPPFLTQ-LHSCFQTVDRLYFVMEYVNG--GDLMYHIQQVGKFK 118
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG--LSGNRTF 924
E A F AA + L LHKRG++YR + D +MLD GH+++ DF K + G T
Sbjct: 119 EPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTR 178
Query: 925 TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQ 984
CG DY+APEI+ + +G + DWWA GVL+Y ML G+ PF E E ++ I +
Sbjct: 179 EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG--EDEDELFQSIMEHN 236
Query: 985 LSLPQNLSPEAVDLLTKLLVVDENTRL--GSQGPTSVKTHPWFRDVDWKGIA--ESTSPV 1040
+S P++LS EAV + L+ RL G +G V+ H +FR +DW+ + E P
Sbjct: 237 VSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPF 296
Query: 1041 PHEIMSRISQHLDSHF 1056
++ + +++ D F
Sbjct: 297 KPKVCGKGAENFDKFF 312
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 105/191 (54%), Gaps = 11/191 (5%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN---RT 923
E + +V ALE LHK G++YR + + ++LD +GH+ L DF K + R
Sbjct: 158 EHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA 217
Query: 924 FTICGMADYLAPEIVQG--KGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIVAK 979
+ CG +Y+AP+IV+G GH A DWW+LGVL+Y +L G PF + S+ +I +
Sbjct: 218 YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRR 277
Query: 980 IAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT---SVKTHPWFRDVDWKGIAES 1036
I K + PQ +S A DL+ +LL+ D RLG GP +K H +F+ ++W +A
Sbjct: 278 ILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGC-GPRDADEIKEHLFFQKINWDDLAAK 336
Query: 1037 TSPVPHEIMSR 1047
P P + + R
Sbjct: 337 KVPAPFKPVIR 347
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine
At 2a Resolution
Length = 345
Score = 126 bits (316), Expect = 7e-29, Method: Composition-based stats.
Identities = 82/279 (29%), Positives = 135/279 (48%), Gaps = 24/279 (8%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQ-VLKEKNLM 823
K+ + D K L ++ L + + F ++K K+ V + +V+ + EK ++
Sbjct: 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKAL-KKDVVLMDDDVECTMVEKRVL 71
Query: 824 KSVSPSACVPQILCT---------CADSMHAGLLLNTYLACPLASILHTPLDEQSARFCA 874
+ + CT + ++ G L+ +C D A F A
Sbjct: 72 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-------HKFDLSRATFYA 124
Query: 875 ASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG--LSGNRTFTICGMADY 932
A ++ L+ LH +G++YR + D ++LDK GH+++ DF K L +T CG DY
Sbjct: 125 AEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDY 184
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLS 992
+APEI+ G+ + + DWW+ GVL+Y ML G+ PF E E + I P+ L
Sbjct: 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE--LFHSIRMDNPFYPRWLE 242
Query: 993 PEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
EA DLL KL V + RLG +G ++ HP FR+++W+
Sbjct: 243 KEAKDLLVKLFVREPEKRLGVRG--DIRQHPLFREINWE 279
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 158/310 (50%), Gaps = 25/310 (8%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
++ D E K + E+ LV + + ++K SK ++ +E+++M
Sbjct: 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM- 123
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASIL-HTPLDEQSARFCAASVVAALED 883
+ + S V Q+ D + +++ L +++ + + E+ ARF A VV AL+
Sbjct: 124 AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA 183
Query: 884 LHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN-----RTFTICGMADYLAPEIV 938
+H G ++R V PD ++LDKSGHL+L D FG + N R T G DY++PE++
Sbjct: 184 IHSMGFIHRDVKPDNMLLDKSGHLKLAD--FGTCMKMNKEGMVRCDTAVGTPDYISPEVL 241
Query: 939 QGKG----HGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA--KGQLSLP--QN 990
+ +G +G DWW++GV +Y ML G+ PF + +S + +KI K L+ P +
Sbjct: 242 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF--YADSLVGTYSKIMNHKNSLTFPDDND 299
Query: 991 LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD--WKGIAESTSPVPHEIMSRI 1048
+S EA +L+ L D RLG G +K H +F++ W+ + ++ +PV ++ S I
Sbjct: 300 ISKEAKNLICAFL-TDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDI 358
Query: 1049 SQHLDSHFED 1058
S+F+D
Sbjct: 359 DT---SNFDD 365
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 158/310 (50%), Gaps = 25/310 (8%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
++ D E K + E+ LV + + ++K SK ++ +E+++M
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM- 128
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASIL-HTPLDEQSARFCAASVVAALED 883
+ + S V Q+ D + +++ L +++ + + E+ ARF A VV AL+
Sbjct: 129 AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA 188
Query: 884 LHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN-----RTFTICGMADYLAPEIV 938
+H G ++R V PD ++LDKSGHL+L D FG + N R T G DY++PE++
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLAD--FGTCMKMNKEGMVRCDTAVGTPDYISPEVL 246
Query: 939 QGKG----HGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA--KGQLSLP--QN 990
+ +G +G DWW++GV +Y ML G+ PF + +S + +KI K L+ P +
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF--YADSLVGTYSKIMNHKNSLTFPDDND 304
Query: 991 LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD--WKGIAESTSPVPHEIMSRI 1048
+S EA +L+ L D RLG G +K H +F++ W+ + ++ +PV ++ S I
Sbjct: 305 ISKEAKNLICAFL-TDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDI 363
Query: 1049 SQHLDSHFED 1058
S+F+D
Sbjct: 364 DT---SNFDD 370
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 158/310 (50%), Gaps = 25/310 (8%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
++ D E K + E+ LV + + ++K SK ++ +E+++M
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM- 128
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASIL-HTPLDEQSARFCAASVVAALED 883
+ + S V Q+ D + +++ L +++ + + E+ ARF A VV AL+
Sbjct: 129 AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA 188
Query: 884 LHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN-----RTFTICGMADYLAPEIV 938
+H G ++R V PD ++LDKSGHL+L D FG + N R T G DY++PE++
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLAD--FGTCMKMNKEGMVRCDTAVGTPDYISPEVL 246
Query: 939 QGKG----HGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA--KGQLSLP--QN 990
+ +G +G DWW++GV +Y ML G+ PF + +S + +KI K L+ P +
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF--YADSLVGTYSKIMNHKNSLTFPDDND 304
Query: 991 LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD--WKGIAESTSPVPHEIMSRI 1048
+S EA +L+ L D RLG G +K H +F++ W+ + ++ +PV ++ S I
Sbjct: 305 ISKEAKNLICAFL-TDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDI 363
Query: 1049 SQHLDSHFED 1058
S+F+D
Sbjct: 364 DT---SNFDD 370
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 99/172 (57%), Gaps = 8/172 (4%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--RTF 924
E+ +F A + L+ LH G++YR + P+ ++LD+ GH++L DF K + + +
Sbjct: 129 EEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY 188
Query: 925 TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIAKG 983
+ CG +Y+APE+V +GH +ADWW+ GVL++ ML G +PF G R+ + + I K
Sbjct: 189 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTL---ILKA 245
Query: 984 QLSLPQNLSPEAVDLLTKLLVVDENTRLGS--QGPTSVKTHPWFRDVDWKGI 1033
+L +PQ LS EA LL L + RLGS G +K H ++ +DW +
Sbjct: 246 KLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKL 297
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps182 Bound To The Pif-Pocket
Length = 311
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + E I AKI
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGL--IFAKI 246
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 247 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 306
Query: 1038 SP 1039
P
Sbjct: 307 PP 308
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 152/324 (46%), Gaps = 25/324 (7%)
Query: 762 SLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKN 821
++A+V++ + E+ K L ++ LV + + + ++K K+ + + L E
Sbjct: 2 AMARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 61
Query: 822 LMK--------SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFC 873
+++ ++ S LC + + G L E ARF
Sbjct: 62 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF-------FHLSRERVFSEDRARFY 114
Query: 874 AASVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GLSGNRTFT-ICGMA 930
A +V+AL+ LH ++ V+YR + + LMLDK GH+++ DF K G+ T CG
Sbjct: 115 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTP 174
Query: 931 DYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQN 990
+YLAPE+++ +G A DWW LGV++Y M+ G +PF + + + I ++ P+
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF--YNQDHEKLFELILMEEIRFPRT 232
Query: 991 LSPEAVDLLTKLLVVDENTRL--GSQGPTSVKTHPWFRDVDWKGIAES--TSPVPHEIMS 1046
L PEA LL+ LL D RL GS+ + H +F + W+ + E + P ++ S
Sbjct: 233 LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTS 292
Query: 1047 RI-SQHLDSHFEDSPVFQASPPRD 1069
+++ D F + P +D
Sbjct: 293 ETDTRYFDEEFTAQMITITPPDQD 316
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 123 bits (308), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 108/212 (50%), Gaps = 8/212 (3%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG--LSGNR 922
E A F AA + L L +G++YR + D +MLD GH+++ DF K G
Sbjct: 118 FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 177
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T CG DY+APEI+ + +G + DWWA GVL+Y ML G+ PF E E ++ I +
Sbjct: 178 TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG--EDEDELFQSIME 235
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRL--GSQGPTSVKTHPWFRDVDWKGI--AESTS 1038
++ P+++S EAV + L+ RL G +G +K H +FR +DW+ + E
Sbjct: 236 HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQP 295
Query: 1039 PVPHEIMSRISQHLDSHFEDSPVFQASPPRDV 1070
P + R +++ D F P P ++V
Sbjct: 296 PYKPKACGRNAENFDRFFTRHPPVLXPPDQEV 327
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 123 bits (308), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 108/212 (50%), Gaps = 8/212 (3%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG--LSGNR 922
E A F AA + L L +G++YR + D +MLD GH+++ DF K G
Sbjct: 439 FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 498
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T CG DY+APEI+ + +G + DWWA GVL+Y ML G+ PF E E ++ I +
Sbjct: 499 TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG--EDEDELFQSIME 556
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRL--GSQGPTSVKTHPWFRDVDWKGI--AESTS 1038
++ P+++S EAV + L+ RL G +G +K H +FR +DW+ + E
Sbjct: 557 HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQP 616
Query: 1039 PVPHEIMSRISQHLDSHFEDSPVFQASPPRDV 1070
P + R +++ D F P P ++V
Sbjct: 617 PYKPKASGRNAENFDRFFTRHPPVLXPPDQEV 648
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 123 bits (308), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 103/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R + G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 189 ARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 246
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 247 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 306
Query: 1038 SP 1039
P
Sbjct: 307 PP 308
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In
Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps210 Bound To The Pif-Pocket
Length = 311
Score = 123 bits (308), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + E I AKI
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL--IFAKI 246
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 247 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 306
Query: 1038 SP 1039
P
Sbjct: 307 PP 308
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor
Length = 446
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 162/342 (47%), Gaps = 30/342 (8%)
Query: 736 ISHDDQNSKDYSSDIPKKPAKSIDIS-SLAK----VSLTDMEWRKCLYSTDCSEIGLVLL 790
+ ++ D+ S P + + ++ SLAK V++ + E+ K L ++ LV
Sbjct: 113 LKKQEEEEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKE 172
Query: 791 RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK--------SVSPSACVPQILCTCADS 842
+ + + ++K K+ + + L E +++ ++ S LC +
Sbjct: 173 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 232
Query: 843 MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLH-KRGVLYRGVSPDVLML 901
+ G L + + E ARF A +V+AL+ LH ++ V+YR + + LML
Sbjct: 233 ANGGEL---FFHLSRERVF----SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 285
Query: 902 DKSGHLQLVDFRFGK-GLSGNRTF-TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFM 959
DK GH+++ DF K G+ T T CG +YLAPE+++ +G A DWW LGV++Y M
Sbjct: 286 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 345
Query: 960 LQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL--GSQGPT 1017
+ G +PF + + + I ++ P+ L PEA LL+ LL D RL GS+
Sbjct: 346 MCGRLPF--YNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAK 403
Query: 1018 SVKTHPWFRDVDWKGIAES--TSPVPHEIMSRI-SQHLDSHF 1056
+ H +F + W+ + E + P ++ S +++ D F
Sbjct: 404 EIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEF 445
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 122 bits (307), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 103/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 126 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 185
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R + G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 186 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 243
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 244 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 303
Query: 1038 SP 1039
P
Sbjct: 304 PP 305
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide Complex
Length = 286
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 104 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 163
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 164 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 221
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 222 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 281
Query: 1038 SP 1039
P
Sbjct: 282 PP 283
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3
Length = 286
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 106 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 165
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 166 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 223
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 224 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 283
Query: 1038 SP 1039
P
Sbjct: 284 PP 285
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 105 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 165 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 222
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 223 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 282
Query: 1038 SP 1039
P
Sbjct: 283 PP 284
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-8
Length = 289
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 107 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 166
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 167 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 224
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 225 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 284
Query: 1038 SP 1039
P
Sbjct: 285 PP 286
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase-
1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine
Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 103/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 130 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 189
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R + G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 190 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 247
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 248 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 307
Query: 1038 SP 1039
P
Sbjct: 308 PP 309
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 141/288 (48%), Gaps = 22/288 (7%)
Query: 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS 829
D E K + SE+ +V ++ + ++K +K + G EV +E+ +
Sbjct: 62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRG-EVSCFREERDVLVNGDR 120
Query: 830 ACVPQILCTCADSMHAGLLLNTYLACPLASILHT---PLDEQSARFCAASVVAALEDLHK 886
+ Q+ D + L++ Y+ L ++L + + ARF A +V A++ +H+
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR 180
Query: 887 RGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN---RTFTICGMADYLAPEIVQGKGH 943
G ++R + PD ++LD+ GH++L DF L + R+ G DYL+PEI+Q G
Sbjct: 181 LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGG 240
Query: 944 GLA-------ADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA--KGQLSLP---QNL 991
G DWWALGV Y M G+ PF + +S + KI K LSLP + +
Sbjct: 241 GPGTGSYGPECDWWALGVFAYEMFYGQTPF--YADSTAETYGKIVHYKEHLSLPLVDEGV 298
Query: 992 SPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSP 1039
EA D + +LL E TRLG G +THP+F +DW G+ +S P
Sbjct: 299 PEEARDFIQRLLCPPE-TRLGRGGAGDFRTHPFFFGLDWDGLRDSVPP 345
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 111 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 170
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 171 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 228
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 229 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 288
Query: 1038 SP 1039
P
Sbjct: 289 PP 290
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 126 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 185
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 186 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 243
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 244 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 303
Query: 1038 SP 1039
P
Sbjct: 304 PP 305
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 187 ARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 244
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 245 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 304
Query: 1038 SP 1039
P
Sbjct: 305 PP 306
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 159/333 (47%), Gaps = 30/333 (9%)
Query: 745 DYSSDIPKKPAKSIDIS-SLAK----VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSL 799
D+ S P + + ++ SLAK V++ + E+ K L ++ LV + + + ++
Sbjct: 119 DFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAM 178
Query: 800 KRFSKQKVKCLGKEVQVLKEKNLMK--------SVSPSACVPQILCTCADSMHAGLLLNT 851
K K+ + + L E +++ ++ S LC + + G L
Sbjct: 179 KILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--- 235
Query: 852 YLACPLASILHTPLDEQSARFCAASVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQLV 910
+ + E ARF A +V+AL+ LH ++ V+YR + + LMLDK GH+++
Sbjct: 236 FFHLSRERVF----SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKIT 291
Query: 911 DFRFGK-GLSGNRTF-TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGS 968
DF K G+ T T CG +YLAPE+++ +G A DWW LGV++Y M+ G +PF
Sbjct: 292 DFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-- 349
Query: 969 WRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL--GSQGPTSVKTHPWFR 1026
+ + + I ++ P+ L PEA LL+ LL D RL GS+ + H +F
Sbjct: 350 YNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 409
Query: 1027 DVDWKGIAES--TSPVPHEIMSRI-SQHLDSHF 1056
+ W+ + E + P ++ S +++ D F
Sbjct: 410 GIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEF 442
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ucn-01
Length = 310
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 244
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 245 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 304
Query: 1038 SP 1039
P
Sbjct: 305 PP 306
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 244
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 245 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 304
Query: 1038 SP 1039
P
Sbjct: 305 PP 306
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 246
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 247 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 306
Query: 1038 SP 1039
P
Sbjct: 307 PP 308
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 244
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 245 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 304
Query: 1038 SP 1039
P
Sbjct: 305 PP 306
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 246
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 247 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 306
Query: 1038 SP 1039
P
Sbjct: 307 PP 308
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 246
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 247 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 306
Query: 1038 SP 1039
P
Sbjct: 307 PP 308
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 130 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 189
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 190 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 247
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 248 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 307
Query: 1038 SP 1039
P
Sbjct: 308 PP 309
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
Js30
Length = 316
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 134 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 193
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 194 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 251
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P+ P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 252 IKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 311
Query: 1038 SP 1039
P
Sbjct: 312 PP 313
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 152/322 (47%), Gaps = 25/322 (7%)
Query: 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLM 823
++V++ + E+ K L ++ LV + + + ++K K+ + + L E ++
Sbjct: 3 SRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 62
Query: 824 K--------SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAA 875
+ ++ S LC + + G L + + E ARF A
Sbjct: 63 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVF----SEDRARFYGA 115
Query: 876 SVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GLSGNRTFT-ICGMADY 932
+V+AL+ LH ++ V+YR + + LMLDK GH+++ DF K G+ T CG +Y
Sbjct: 116 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEY 175
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLS 992
LAPE+++ +G A DWW LGV++Y M+ G +PF + + + I ++ P+ L
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF--YNQDHEKLFELILMEEIRFPRTLG 233
Query: 993 PEAVDLLTKLLVVDENTRL--GSQGPTSVKTHPWFRDVDWKGIAES--TSPVPHEIMSRI 1048
PEA LL+ LL D RL GS+ + H +F + W+ + E + P ++ S
Sbjct: 234 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSET 293
Query: 1049 -SQHLDSHFEDSPVFQASPPRD 1069
+++ D F + P +D
Sbjct: 294 DTRYFDEEFTAQMITITPPDQD 315
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide
And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide
And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 149/321 (46%), Gaps = 25/321 (7%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
+V++ + E+ K L ++ LV + + + ++K K+ + + L E +++
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 825 --------SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAAS 876
++ S LC + + G L E ARF A
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELF-------FHLSRERVFSEDRARFYGAE 118
Query: 877 VVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GLSGNRTFT-ICGMADYL 933
+V+AL+ LH ++ V+YR + + LMLDK GH+++ DF K G+ T CG +YL
Sbjct: 119 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYL 178
Query: 934 APEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSP 993
APE+++ +G A DWW LGV++Y M+ G +PF + + + I ++ P+ L P
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF--YNQDHEKLFELILMEEIRFPRTLGP 236
Query: 994 EAVDLLTKLLVVDENTRL--GSQGPTSVKTHPWFRDVDWKGIAES--TSPVPHEIMSRI- 1048
EA LL+ LL D RL GS+ + H +F + W+ + E + P ++ S
Sbjct: 237 EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETD 296
Query: 1049 SQHLDSHFEDSPVFQASPPRD 1069
+++ D F + P +D
Sbjct: 297 TRYFDEEFTAQMITITPPDQD 317
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 128/262 (48%), Gaps = 16/262 (6%)
Query: 792 DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851
D+ ++K K+++K E L E+ ++ VS C P I+C + + H L+
Sbjct: 212 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC-PFIVCM-SYAFHTPDKLSF 269
Query: 852 YLACPLASILHTPLD------EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905
L LH L E RF AA ++ LE +H R V+YR + P ++LD+ G
Sbjct: 270 ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 329
Query: 906 HLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEM 964
H+++ D S + G Y+APE++Q G + +ADW++LG +++ +L+G
Sbjct: 330 HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
Query: 965 PFGSWR---ESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG--SQGPTSV 1019
PF + + EID + + LP + SPE LL LL D N RLG +G V
Sbjct: 390 PFRQHKTKDKHEIDRMTLTMA--VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEV 447
Query: 1020 KTHPWFRDVDWKGIAESTSPVP 1041
K P+FR +DW+ + P P
Sbjct: 448 KESPFFRSLDWQMVFLQKYPPP 469
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 128/262 (48%), Gaps = 16/262 (6%)
Query: 792 DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851
D+ ++K K+++K E L E+ ++ VS C P I+C + + H L+
Sbjct: 211 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC-PFIVCM-SYAFHTPDKLSF 268
Query: 852 YLACPLASILHTPLD------EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905
L LH L E RF AA ++ LE +H R V+YR + P ++LD+ G
Sbjct: 269 ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 328
Query: 906 HLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEM 964
H+++ D S + G Y+APE++Q G + +ADW++LG +++ +L+G
Sbjct: 329 HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 388
Query: 965 PFGSWR---ESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG--SQGPTSV 1019
PF + + EID + + LP + SPE LL LL D N RLG +G V
Sbjct: 389 PFRQHKTKDKHEIDRMTLTMA--VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEV 446
Query: 1020 KTHPWFRDVDWKGIAESTSPVP 1041
K P+FR +DW+ + P P
Sbjct: 447 KESPFFRSLDWQMVFLQKYPPP 468
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 149/293 (50%), Gaps = 20/293 (6%)
Query: 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS 829
D E K + E+ +V L++++ ++K +K ++ + +E++++ + S
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDS 133
Query: 830 ACVPQILCTCADSMHAGLLLNTYLACPLASIL---HTPLDEQSARFCAASVVAALEDLHK 886
+ + D + L+++ Y+ L ++L L E+ ARF A +V A++ +H+
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 887 RGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF---TICGMADYLAPEIVQ---- 939
++R + PD +++D +GH++L DF L + T G DY++PEI+Q
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEG 253
Query: 940 GKG-HGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA--KGQLSLP---QNLSP 993
GKG +G DWW+LGV +Y ML GE PF + ES ++ KI K + P ++S
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETPF--YAESLVETYGKIMNHKERFQFPTQVTDVSE 311
Query: 994 EAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSPVPHEIMS 1046
A DL+ +L+ E+ RLG G K HP+F +DW I +P E+ S
Sbjct: 312 NAKDLIRRLICSREH-RLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSS 363
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And
Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In
Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 128/262 (48%), Gaps = 16/262 (6%)
Query: 792 DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851
D+ ++K K+++K E L E+ ++ VS C P I+C + + H L+
Sbjct: 212 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC-PFIVCM-SYAFHTPDKLSF 269
Query: 852 YLACPLASILHTPLD------EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905
L LH L E RF AA ++ LE +H R V+YR + P ++LD+ G
Sbjct: 270 ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 329
Query: 906 HLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEM 964
H+++ D S + G Y+APE++Q G + +ADW++LG +++ +L+G
Sbjct: 330 HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
Query: 965 PFGSWR---ESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG--SQGPTSV 1019
PF + + EID + + LP + SPE LL LL D N RLG +G V
Sbjct: 390 PFRQHKTKDKHEIDRMTLTMA--VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEV 447
Query: 1020 KTHPWFRDVDWKGIAESTSPVP 1041
K P+FR +DW+ + P P
Sbjct: 448 KESPFFRSLDWQMVFLQKYPPP 469
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 128/262 (48%), Gaps = 16/262 (6%)
Query: 792 DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851
D+ ++K K+++K E L E+ ++ VS C P I+C + + H L+
Sbjct: 212 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC-PFIVCM-SYAFHTPDKLSF 269
Query: 852 YLACPLASILHTPLD------EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905
L LH L E RF AA ++ LE +H R V+YR + P ++LD+ G
Sbjct: 270 ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 329
Query: 906 HLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEM 964
H+++ D S + G Y+APE++Q G + +ADW++LG +++ +L+G
Sbjct: 330 HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
Query: 965 PFGSWR---ESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG--SQGPTSV 1019
PF + + EID + + LP + SPE LL LL D N RLG +G V
Sbjct: 390 PFRQHKTKDKHEIDRMTLTMA--VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEV 447
Query: 1020 KTHPWFRDVDWKGIAESTSPVP 1041
K P+FR +DW+ + P P
Sbjct: 448 KESPFFRSLDWQMVFLQKYPPP 469
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 101/182 (55%), Gaps = 9/182 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--- 921
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+ DF K LS
Sbjct: 132 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 191
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
R G A Y++PE++ K ++D WALG +IY ++ G PF + +E I KI
Sbjct: 192 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKI 249
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGS---QGPTSVKTHPWFRDVDWKGIAEST 1037
K + P P+A DL+ KLLV+D RLG +G +K HP+F V W+ + + T
Sbjct: 250 IKLEYDFPAAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 309
Query: 1038 SP 1039
P
Sbjct: 310 PP 311
>pdb|1CX4|A Chain A, Crystal Structure Of A Deletion Mutant Of The Type Ii Beta
Regulatory Subunit Of Camp-Dependent Protein Kinase
Length = 305
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
H KT ++ ++ A D LF+ L Q +LD M V+ G+ V+ QG +GD FYV+
Sbjct: 22 HPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVI 81
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
G F++ K V R + Y + SFGELALMYN P A++ A + G LW L
Sbjct: 82 DRGTFDIYV----KCDGVGRCVGNY--DNRGSFGELALMYNTPRAATITATSPGALWGLD 135
Query: 581 REDFRGILMSEFSN--------LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQT 632
R FR I++ + + SL L+S+++ RL ++ D + ++ G+
Sbjct: 136 RVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEVSERLKVV------DVIGTKVYNDGEQ 189
Query: 633 IVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEG 692
I+ + + +I++ G+VRIT KSD+ E+ + ++ L G
Sbjct: 190 IIAQGDSADSFFIVESGEVRITMKR---------KGKSDIE-ENGAVEIARCL-----RG 234
Query: 693 SYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKI 736
YFGE L+ + +A A+ V C + + F+ ++GP +I
Sbjct: 235 QYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEI 278
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 161/339 (47%), Gaps = 24/339 (7%)
Query: 719 AILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEWRKCLY 778
A+ + D++V T+ SH Y ++ + + ++ D E K +
Sbjct: 40 ALSVETLLDVLVCLYTECSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIG 99
Query: 779 STDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCT 838
E+ +V ++++E ++K +K ++ + +E++++ + + +
Sbjct: 100 RGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWITALHYA 158
Query: 839 CADSMHAGLLLNTYLACPLASIL---HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVS 895
D H L+++ Y+ L ++L L E ARF +V A++ +H+ ++R +
Sbjct: 159 FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIK 218
Query: 896 PDVLMLDKSGHLQLVDFRFGKGLSGNRTFTI-----CGMADYLAPEIVQ----GKG-HGL 945
PD ++LD +GH++L D FG L N T+ G DY++PEI+Q G G +G
Sbjct: 219 PDNVLLDVNGHIRLAD--FGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGP 276
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQ--LSLPQ---NLSPEAVDLLT 1000
DWW+LGV +Y ML GE PF + ES ++ KI + P ++S EA DL+
Sbjct: 277 ECDWWSLGVCMYEMLYGETPF--YAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQ 334
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSP 1039
+L+ E RLG G K H +F ++W+ I +P
Sbjct: 335 RLICSRER-RLGQNGIEDFKKHAFFEGLNWENIRNLEAP 372
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 161/339 (47%), Gaps = 24/339 (7%)
Query: 719 AILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEWRKCLY 778
A+ + D++V T+ SH Y ++ + + ++ D E K +
Sbjct: 24 ALSVETLLDVLVCLYTECSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIG 83
Query: 779 STDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCT 838
E+ +V ++++E ++K +K ++ + +E++++ + + +
Sbjct: 84 RGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWITALHYA 142
Query: 839 CADSMHAGLLLNTYLACPLASIL---HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVS 895
D H L+++ Y+ L ++L L E ARF +V A++ +H+ ++R +
Sbjct: 143 FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIK 202
Query: 896 PDVLMLDKSGHLQLVDFRFGKGLSGNRTFTI-----CGMADYLAPEIVQ----GKG-HGL 945
PD ++LD +GH++L D FG L N T+ G DY++PEI+Q G G +G
Sbjct: 203 PDNVLLDVNGHIRLAD--FGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGP 260
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQ--LSLPQ---NLSPEAVDLLT 1000
DWW+LGV +Y ML GE PF + ES ++ KI + P ++S EA DL+
Sbjct: 261 ECDWWSLGVCMYEMLYGETPF--YAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQ 318
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSP 1039
+L+ E RLG G K H +F ++W+ I +P
Sbjct: 319 RLICSRER-RLGQNGIEDFKKHAFFEGLNWENIRNLEAP 356
>pdb|3OF1|A Chain A, Crystal Structure Of Bcy1, The Yeast Regulatory Subunit Of
Pka
Length = 246
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 121/265 (45%), Gaps = 37/265 (13%)
Query: 470 HIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMA 529
+E+++ ++FLF KL ++++C++ V G ++KQG +GD FYVV G +
Sbjct: 4 RLEKSIRNNFLFNKLDSDSKRLVINCLEEKSVPKGATIIKQGDQGDYFYVVEKGTVDFYV 63
Query: 530 TQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILM 589
+ N P SSFGELALMYN P A+V A ++ +LWAL R FR IL+
Sbjct: 64 NDNKVNSSGPG----------SSFGELALMYNSPRAATVVATSDCLLWALDRLTFRKILL 113
Query: 590 -SEFSN-LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQ 647
S F L LL+S+ +L LT + LAD L + G+TI+ + Y+I+
Sbjct: 114 GSSFKKRLMYDDLLKSMPVLKSLTTYDRAKLADALDTKIYQPGETIIREGDQGENFYLIE 173
Query: 648 RGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGS 707
G V D ++ + + + + YFGE LL +
Sbjct: 174 YGAV-------------------------DVSKKGQGVINKLKDHDYFGEVALLNDLPRQ 208
Query: 708 LTAVAVDDVVCAILTKEKFDLVVGP 732
T A A L K F ++GP
Sbjct: 209 ATVTATKRTKVATLGKSGFQRLLGP 233
>pdb|3TNP|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|E Chain E, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 416
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 41/287 (14%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
H KT ++ ++ A D LF+ L Q +LD M V+ G+ V+ QG +GD FYV+
Sbjct: 133 HPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVI 192
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
G F++ K V R + Y + SFGELALMYN P A++ A + G LW L
Sbjct: 193 DRGTFDIYV----KCDGVGRCVGNY--DNRGSFGELALMYNTPKAATITATSPGALWGLD 246
Query: 581 REDFRGILMSEFSN--------LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQT 632
R FR I++ + + SL L+S+++ RL ++ D + ++ G+
Sbjct: 247 RVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEVSERLKVV------DVIGTKVYNDGEQ 300
Query: 633 IVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKS-- 690
I+ + + +I++ G+V+IT K VE++G +VE +
Sbjct: 301 IIAQGDLADSFFIVESGEVKITM-----------KRKGKSEVEENG-------AVEIARC 342
Query: 691 -EGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKI 736
G YFGE L+ + +A A+ V C + + F+ ++GP +I
Sbjct: 343 FRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEI 389
>pdb|3TNQ|A Chain A, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 416
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 41/287 (14%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
H KT ++ ++ A D LF+ L Q +LD M V+ G+ V+ QG +GD FYV+
Sbjct: 133 HPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVI 192
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
G F++ K V R + Y + SFGELALMYN P A++ A + G LW L
Sbjct: 193 DRGTFDIYV----KCDGVGRCVGNY--DNRGSFGELALMYNTPKAATITATSPGALWGLD 246
Query: 581 REDFRGILMSEFSN--------LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQT 632
R FR I++ + + SL L+S+++ RL ++ D + ++ G+
Sbjct: 247 RVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEVSERLKVV------DVIGTKVYNDGEQ 300
Query: 633 IVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKS-- 690
I+ + + +I++ G+V+IT K VE++G +VE +
Sbjct: 301 IIAQGDLADSFFIVESGEVKITM-----------KRKGKSEVEENG-------AVEIARC 342
Query: 691 -EGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKI 736
G YFGE L+ + +A A+ V C + + F+ ++GP +I
Sbjct: 343 FRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEI 389
>pdb|2QCS|B Chain B, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
Length = 291
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 134/299 (44%), Gaps = 56/299 (18%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
K ++ A + +A+ + LF L D++ + D M V AG+ V++QG EGD FYV+
Sbjct: 29 KDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQ 88
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
GE +V E + + SFGELAL+Y P A+V+A TN LW + R+
Sbjct: 89 GEMDVYVNNEWAT----------SVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRD 138
Query: 583 DFRGILMS----------EFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQT 632
+R ILM EF LS + +L S+D RLT+ AD L V F GQ
Sbjct: 139 SYRRILMGSTLRKRKMYEEF--LSKVSILESLDKWERLTV------ADALEPVQFEDGQK 190
Query: 633 IVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSE- 691
IV E +II G +A V +S+ E VE
Sbjct: 191 IVVQGEPGDEFFIILEG------------SAAVLQRRSE-----------NEEFVEVGRL 227
Query: 692 --GSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSS 748
YFGE LL + T VA + C L + +F+ V+GP + I +N + Y+S
Sbjct: 228 GPSDYFGEIALLMNRPKAATVVARGPLKCVKLDRPRFERVLGPCSDILK--RNIQQYNS 284
>pdb|1RL3|A Chain A, Crystal Structure Of Camp-free R1a Subunit Of Pka
pdb|1RL3|B Chain B, Crystal Structure Of Camp-free R1a Subunit Of Pka
pdb|1RGS|A Chain A, Regulatory Subunit Of Camp Dependent Protein Kinase
Length = 288
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 134/299 (44%), Gaps = 56/299 (18%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
K ++ A + +A+ + LF L D++ + D M V AG+ V++QG EGD FYV+
Sbjct: 27 KDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQ 86
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
GE +V E + + SFGELAL+Y P A+V+A TN LW + R+
Sbjct: 87 GEMDVYVNNEWAT----------SVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRD 136
Query: 583 DFRGILMS----------EFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQT 632
+R ILM EF LS + +L S+D RLT+ AD L V F GQ
Sbjct: 137 SYRRILMGSTLRKRKMYEEF--LSKVSILESLDKWERLTV------ADALEPVQFEDGQK 188
Query: 633 IVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSE- 691
IV E +II G +A V +S+ E VE
Sbjct: 189 IVVQGEPGDEFFIILEG------------SAAVLQRRSE-----------NEEFVEVGRL 225
Query: 692 --GSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSS 748
YFGE LL + T VA + C L + +F+ V+GP + I +N + Y+S
Sbjct: 226 GPSDYFGEIALLMNRPRAATVVARGPLKCVKLDRPRFERVLGPCSDILK--RNIQQYNS 282
>pdb|1NE4|A Chain A, Crystal Structure Of Rp-Camp Binding R1a Subunit Of Camp-
Dependent Protein Kinase
pdb|1NE6|A Chain A, Crystal Structure Of Sp-Camp Binding R1a Subunit Of Camp-
Dependent Protein Kinase
Length = 283
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 134/299 (44%), Gaps = 56/299 (18%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
K ++ A + +A+ + LF L D++ + D M V AG+ V++QG EGD FYV+
Sbjct: 25 KDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQ 84
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
GE +V E + + SFGELAL+Y P A+V+A TN LW + R+
Sbjct: 85 GEMDVYVNNEWAT----------SVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRD 134
Query: 583 DFRGILMS----------EFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQT 632
+R ILM EF LS + +L S+D RLT+ AD L V F GQ
Sbjct: 135 SYRRILMGSTLRKRKMYEEF--LSKVSILESLDKWERLTV------ADALEPVQFEDGQK 186
Query: 633 IVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSE- 691
IV E +II G +A V +S+ E VE
Sbjct: 187 IVVQGEPGDEFFIILEG------------SAAVLQRRSE-----------NEEFVEVGRL 223
Query: 692 --GSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSS 748
YFGE LL + T VA + C L + +F+ V+GP + I +N + Y+S
Sbjct: 224 GPSDYFGEIALLMNRPRAATVVARGPLKCVKLDRPRFERVLGPCSDILK--RNIQQYNS 280
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 143/314 (45%), Gaps = 14/314 (4%)
Query: 761 SSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEK 820
SS +D + K + ++ L + E F ++K K+ + +E ++ E+
Sbjct: 30 SSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSER 89
Query: 821 N-LMKSVS-PSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP--LDEQSARFCAAS 876
N L+K+V P AD ++ +L+ L L E ARF AA
Sbjct: 90 NVLLKNVKHPFLVGLHFSFQTADKLY--FVLDYINGGELFYHLQRERCFLEPRARFYAAE 147
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-GLSGNRTF-TICGMADYLA 934
+ +AL LH ++YR + P+ ++LD GH+ L DF K + N T T CG +YLA
Sbjct: 148 IASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLA 207
Query: 935 PEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPE 994
PE++ + + DWW LG ++Y ML G PF S +E + I L L N++
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE--MYDNILNKPLQLKPNITNS 265
Query: 995 AVDLLTKLLVVDENTRLGSQGP-TSVKTHPWFRDVDWKGIAES--TSPV-PHEIMSRISQ 1050
A LL LL D RLG++ +K+H +F ++W + T P P+ +
Sbjct: 266 ARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGPNDLR 325
Query: 1051 HLDSHFEDSPVFQA 1064
H D F + PV A
Sbjct: 326 HFDPEFTEEPVPNA 339
>pdb|4DIN|B Chain B, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 381
Score = 106 bits (264), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 139/301 (46%), Gaps = 56/301 (18%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
K ++ + +A+ + LF L D++ + D M V AG+ V++QG EGD FYVV
Sbjct: 120 KDYKTMTALAKAISKNVLFAHLDDNERSDIFDAMFPVTHIAGETVIQQGNEGDNFYVVDQ 179
Query: 523 GEFEVMATQEEKNGE-VPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKR 581
GE +V NGE V + + SFGELAL+Y P A+V+A T+ LW + R
Sbjct: 180 GEVDVYV-----NGEWVTNISEG------GSFGELALIYGTPRAATVKAKTDLKLWGIDR 228
Query: 582 EDFRGILMS----------EFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQ 631
+ +R ILM EF LS + +L S++ RLT+ AD L V F G+
Sbjct: 229 DSYRRILMGSTLRKRKMYEEF--LSKVSILESLEKWERLTV------ADALEPVQFEDGE 280
Query: 632 TIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKS--DLHVEDDGTQSSKELSVEK 689
IV E YII G A+V +S + +VE S
Sbjct: 281 KIVVQGEPGDDFYIITEG------------TASVLQRRSPNEEYVEVGRLGPS------- 321
Query: 690 SEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSD 749
YFGE LL + T VA + C L + +F+ V+GP ++I +N + Y+S
Sbjct: 322 ---DYFGEIALLLNRPRAATVVARGPLKCVKLDRPRFERVLGPCSEILK--RNIQRYNSF 376
Query: 750 I 750
I
Sbjct: 377 I 377
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 452 QIWVPSSSAHRKTWEEEAHIERALHDHFL-----FRKLTDSQCHVLLDCMQRVEVQAGDI 506
++W ++R+ +R +++ FL L + + D ++ V+ + G+
Sbjct: 222 KLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLEKWERLTVADALEPVQFEDGEK 281
Query: 507 VVKQGGEGDCFYVVGSGEFEVMATQ--EEKNGEVPRVLQRYTAEKLSSFGELALMYNKPL 564
+V QG GD FY++ G V+ + E+ EV R+ FGE+AL+ N+P
Sbjct: 282 IVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPS------DYFGEIALLLNRPR 335
Query: 565 QASVRAVTNGMLWALKREDFRGIL 588
A+V A L R F +L
Sbjct: 336 AATVVARGPLKCVKLDRPRFERVL 359
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
Length = 576
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 97/175 (55%), Gaps = 9/175 (5%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT- 925
E A F AA + LEDLH+ ++YR + P+ ++LD GH+++ D + +T
Sbjct: 285 EARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344
Query: 926 ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRES----EIDIVAKIA 981
G Y+APE+V+ + + + DWWALG L+Y M+ G+ PF ++ E++ + K
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV 404
Query: 982 KGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTS--VKTHPWFRDVDWKGIA 1034
+ S + SP+A L ++LL D RLG +G ++ VK HP F+ +++K +
Sbjct: 405 PEEYS--ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLG 457
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 97/175 (55%), Gaps = 9/175 (5%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT- 925
E A F AA + LEDLH+ ++YR + P+ ++LD GH+++ D + +T
Sbjct: 285 EARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344
Query: 926 ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRES----EIDIVAKIA 981
G Y+APE+V+ + + + DWWALG L+Y M+ G+ PF ++ E++ + K
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV 404
Query: 982 KGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTS--VKTHPWFRDVDWKGIA 1034
+ S + SP+A L ++LL D RLG +G ++ VK HP F+ +++K +
Sbjct: 405 PEEYS--ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLG 457
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 103/183 (56%), Gaps = 10/183 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L E+ R +V+A+ +H +G +R + P+ L+ D+ L+L+DF GN+ +
Sbjct: 105 LSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164
Query: 925 ---TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
T CG Y APE++QGK + G AD W++G+L+Y ++ G +PF ++ + + KI
Sbjct: 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD--DNVMALYKKI 222
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPW-FRDVDWKGIAESTSP 1039
+G+ +P+ LSP ++ LL ++L VD R+ + ++ HPW +D ++ +S +P
Sbjct: 223 MRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMK---NLLNHPWIMQDYNYPVEWQSKNP 279
Query: 1040 VPH 1042
H
Sbjct: 280 FIH 282
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 15/293 (5%)
Query: 784 EIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS- 842
++ +V D++ ++K +KQK + V KE +M+ + V + + D
Sbjct: 30 KVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLV-NLWYSFQDEE 88
Query: 843 ---MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVL 899
M LLL L L +H E++ + +V AL+ L + +++R + PD +
Sbjct: 89 DMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNI 146
Query: 900 MLDKSGHLQLVDFRFGKGL-SGNRTFTICGMADYLAPEIV---QGKGHGLAADWWALGVL 955
+LD+ GH+ + DF L + T+ G Y+APE+ +G G+ A DWW+LGV
Sbjct: 147 LLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVT 206
Query: 956 IYFMLQGEMPFG-SWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQ 1014
Y +L+G P+ S +IV ++ P S E V LL KLL + + R
Sbjct: 207 AYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQL 266
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSRISQHLDSHFEDSPVFQASPP 1067
+ V+ P+ D++W + + +P I ++ + D FE + S P
Sbjct: 267 --SDVQNFPYMNDINWDAVFQKRL-IPGFIPNKGRLNCDPTFELEEMILESKP 316
>pdb|3SHR|A Chain A, Crystal Structure Of Cgmp-Dependent Protein Kinase Reveals
Novel Site Of Interchain Communication
pdb|3SHR|B Chain B, Crystal Structure Of Cgmp-Dependent Protein Kinase Reveals
Novel Site Of Interchain Communication
Length = 299
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 35/287 (12%)
Query: 457 SSSAHRKTWEEEAH---IERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGE 513
S A RK + E I+ A+ D+ + L SQ ++DCM VE ++K+G
Sbjct: 20 SMQAFRKFTKSERSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDV 79
Query: 514 GDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTN 573
G YV+ G+ EV K G ++ T FGELA++YN A+V+ + N
Sbjct: 80 GSLVYVMEDGKVEVT-----KEG-----VKLCTMGPGKVFGELAILYNCTRTATVKTLVN 129
Query: 574 GMLWALKREDFRGILMSE--FSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQ 631
LWA+ R+ F+ I+M + ++ L+SV L LS LAD L E + G+
Sbjct: 130 VKLWAIDRQCFQTIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYENGE 189
Query: 632 TIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSE 691
I+ +II +G+V +T +D +
Sbjct: 190 YIIRQGARGDTFFIISKGKVNVT--------------------REDSPNEDPVFLRTLGK 229
Query: 692 GSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738
G +FGE L GE + + +A + V C ++ ++ F ++G L +S+
Sbjct: 230 GDWFGEKALQGEDVRTANVIAAEAVTCLVIDRDSFKHLIGGLDDVSN 276
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
Length = 268
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L ++S+ L+LK K +++ G E Q+ +E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ DS L+L PL ++ + DEQ + AL
Sbjct: 66 R-HPNILRLYGYFHDSTRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R +CG DYL PE+++G+
Sbjct: 122 SYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + D +I++ + + P ++ A DL+++
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQDTYKRISRVEFTFPDFVTEGARDLISR 239
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 240 LLKHNP-----SQRPMLREVLEHPW 259
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With [7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 127/272 (46%), Gaps = 14/272 (5%)
Query: 760 ISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKE 819
+ S + +L D + + L + L R S+ L+LK K +++ G E Q+ +E
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRRE 62
Query: 820 KNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCA 874
+ + + ++ D+ L+L PL ++ + DEQ
Sbjct: 63 VEIQSHLR-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSRFDEQRTATYI 118
Query: 875 ASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLA 934
+ AL H + V++R + P+ L+L +G L++ DF + +R T+CG DYL
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLP 178
Query: 935 PEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPE 994
PE+++G+ H D W+LGVL Y L G PF + + + +I++ + + P ++
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEA--HTYQETYRRISRVEFTFPDFVTEG 236
Query: 995 AVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
A DL+++LL + + RL V HPW +
Sbjct: 237 ARDLISRLLKHNASQRLTL---AEVLEHPWIK 265
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 14/272 (5%)
Query: 760 ISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKE 819
+ S + +L D + + L + L R S+ L+LK K +++ G E Q+ +E
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRRE 62
Query: 820 KNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCA 874
+ + + ++ D+ L+L PL ++ + DEQ
Sbjct: 63 VEIQSHLR-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSRFDEQRTATYI 118
Query: 875 ASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLA 934
+ AL H + V++R + P+ L+L +G L++ DF + +R T+CG DYL
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLP 178
Query: 935 PEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPE 994
PE+++G+ H D W+LGVL Y L G PF + E +I++ + + P ++
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE--TYRRISRVEFTFPDFVTEG 236
Query: 995 AVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
A DL+++LL + + RL V HPW +
Sbjct: 237 ARDLISRLLKHNASQRLTL---AEVLEHPWIK 265
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 6/173 (3%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
E A F A +V+ LE LH+R ++YR + P+ ++LD G++++ D L +T
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 925 T--ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRES--EIDIVAKI 980
T G ++APE++ G+ + + D++ALGV +Y M+ PF + E ++ ++
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV 405
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDVDWK 1031
+ ++ P SP + D LL D RLG + + ++THP FRD+ W+
Sbjct: 406 LEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWR 458
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 6/173 (3%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
E A F A +V+ LE LH+R ++YR + P+ ++LD G++++ D L +T
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 925 T--ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRES--EIDIVAKI 980
T G ++APE++ G+ + + D++ALGV +Y M+ PF + E ++ ++
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV 405
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDVDWK 1031
+ ++ P SP + D LL D RLG + + ++THP FRD+ W+
Sbjct: 406 LEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWR 458
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 83 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 138
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R T+CG DYL PE+++G+
Sbjct: 139 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 198
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 199 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 256
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 257 LLKHN-----PSQRPMLREVLEHPW 276
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 6/173 (3%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
E A F A +V+ LE LH+R ++YR + P+ ++LD G++++ D L +T
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 925 T--ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRES--EIDIVAKI 980
T G ++APE++ G+ + + D++ALGV +Y M+ PF + E ++ ++
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV 405
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDVDWK 1031
+ ++ P SP + D LL D RLG + + ++THP FRD+ W+
Sbjct: 406 LEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWR 458
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 6/173 (3%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
E A F A +V+ LE LH+R ++YR + P+ ++LD G++++ D L +T
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 925 T--ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRES--EIDIVAKI 980
T G ++APE++ G+ + + D++ALGV +Y M+ PF + E ++ ++
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV 405
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDVDWK 1031
+ ++ P SP + D LL D RLG + + ++THP FRD+ W+
Sbjct: 406 LEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWR 458
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 92 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 147
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R T+CG DYL PE+++G+
Sbjct: 148 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 207
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 265
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 266 LLKHNP-----SQRPMLREVLEHPW 285
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 66 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R T+CG DYL PE+++G+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 181
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 239
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 240 LLKHNP-----SQRPMLREVLEHPW 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
Length = 267
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 65 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 120
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R T+CG DYL PE+++G+
Sbjct: 121 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 180
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 181 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 238
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 239 LLKHNP-----SQRPMLREVLEHPW 258
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 69 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R T+CG DYL PE+++G+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 242
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 243 LLKHNP-----SQRPMLREVLEHPW 262
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 71 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R T+CG DYL PE ++G+
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGR 186
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 187 XHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 244
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 245 LLKHNP-----SQRPXLREVLEHPW 264
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 69 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R T+CG DYL PE+++G+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 242
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 243 LLKHNP-----SQRPMLREVLEHPW 262
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 71 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R T+CG DYL PE+++G+
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 244
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 245 LLKHNP-----SQRPMLREVLEHPW 264
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By A
Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine Aurora
Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 70 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 125
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R T+CG DYL PE+++G+
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 243
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 244 LLKHNP-----SQRPMLREVLEHPW 263
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 67 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R T+CG DYL PE+++G+
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGR 182
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 240
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 241 LLKHNP-----SQRPMLREVLEHPW 260
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 98/176 (55%), Gaps = 14/176 (7%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSP-DVLMLDKSGH---LQLVDFRFGKGLSG 920
E+ A F ++ +E LH +GV++R + P ++L +D+SG+ L++ DF F K L
Sbjct: 118 FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA 177
Query: 921 NRTF--TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSW-RESEIDIV 977
T C A+++APE+++ +G+ D W+LG+L+Y ML G PF + ++ +I+
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
Query: 978 AKIAKGQLSLP----QNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
+I G+ +L +S A DL++K+L VD + RL ++ V HPW D
Sbjct: 238 TRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAK---QVLQHPWVTQKD 290
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 98/176 (55%), Gaps = 14/176 (7%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSP-DVLMLDKSGH---LQLVDFRFGKGLSG 920
E+ A F ++ +E LH +GV++R + P ++L +D+SG+ L++ DF F K L
Sbjct: 118 FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA 177
Query: 921 NRTF--TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSW-RESEIDIV 977
T C A+++APE+++ +G+ D W+LG+L+Y ML G PF + ++ +I+
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
Query: 978 AKIAKGQLSLP----QNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
+I G+ +L +S A DL++K+L VD + RL ++ V HPW D
Sbjct: 238 TRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAK---QVLQHPWVTQKD 290
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 68 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 123
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R +CG DYL PE+++G+
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGR 183
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 241
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 242 LLKHNP-----SQRPMLREVLEHPW 261
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 100/177 (56%), Gaps = 16/177 (9%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSP-DVLMLDKSGH---LQLVDFRFGKGLSG 920
E+ A ++ +E LH +GV++R + P ++L +D+SG+ +++ DF F K L
Sbjct: 113 FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
Query: 921 NRTF--TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSW-RESEIDIV 977
T C A+++APE+++ +G+ A D W+LGVL+Y ML G PF + ++ +I+
Sbjct: 173 ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL 232
Query: 978 AKIAKGQLSLP----QNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDW 1030
A+I G+ SL ++S A DL++K+L VD + RL + V HPW V W
Sbjct: 233 ARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTA---ALVLRHPWI--VHW 284
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor
Length = 272
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 69 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ +F + +R T+CG DYL PE+++G+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 242
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 243 LLKHNP-----SQRPMLREVLEHPW 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + + L+LK K +++ G E Q+ +E + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 63 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 118
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R T+CG DYL PE+++G+
Sbjct: 119 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 178
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 179 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 236
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 237 LLKHNP-----SQRPMLREVLEHPW 256
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 68 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 123
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ +F + +R T+CG DYL PE+++G+
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 183
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 241
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 242 LLKHNP-----SQRPMLREVLEHPW 261
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 66 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R +CG DYL PE+++G+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGR 181
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 239
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 240 LLKHNP-----SQRPMLREVLEHPW 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 69 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R +CG DYL PE+++G+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGR 184
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 242
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 243 LLKHNP-----SQRPMLREVLEHPW 262
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 66 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R +CG DYL PE+++G+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGR 181
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 239
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 240 LLKHNP-----SQRPMLREVLEHPW 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 66 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R +CG DYL PE+++G+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGR 181
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 239
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 240 LLKHNP-----SQRPMLREVLEHPW 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole Inhibitor
Length = 268
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 66 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R +CG DYL PE+++G+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 239
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 240 LLKHNP-----SQRPMLREVLEHPW 259
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen
Length = 284
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 122/275 (44%), Gaps = 22/275 (8%)
Query: 766 VSLTDMEWRKCLYSTDCSEIG----------LVLLRDSEN--FLSLKRFSKQKVKCLGKE 813
+L +M RK ++ D +IG + L R+ +N ++LK K +++ G E
Sbjct: 1 TALAEMPKRK--FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE 58
Query: 814 VQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASIL--HTPLDEQSAR 871
Q+ +E + + + ++ D L+L L L H DEQ +
Sbjct: 59 HQLRREIEIQSHLR-HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMAD 931
+ AL H+R V++R + P+ L++ G L++ DF + R +CG D
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLD 177
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNL 991
YL PE+++GK H D W GVL Y L G PF S S + +I L P L
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS--PSHTETHRRIVNVDLKFPPFL 235
Query: 992 SPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
S + DL++KLL RL +G V HPW +
Sbjct: 236 SDGSKDLISKLLRYHPPQRLPLKG---VMEHPWVK 267
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 122/275 (44%), Gaps = 22/275 (8%)
Query: 766 VSLTDMEWRKCLYSTDCSEIG----------LVLLRDSEN--FLSLKRFSKQKVKCLGKE 813
+L +M RK ++ D +IG + L R+ +N ++LK K +++ G E
Sbjct: 2 TALAEMPKRK--FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE 59
Query: 814 VQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASIL--HTPLDEQSAR 871
Q+ +E + + + ++ D L+L L L H DEQ +
Sbjct: 60 HQLRREIEIQSHLR-HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 118
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMAD 931
+ AL H+R V++R + P+ L++ G L++ DF + R +CG D
Sbjct: 119 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLD 178
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNL 991
YL PE+++GK H D W GVL Y L G PF S S + +I L P L
Sbjct: 179 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS--PSHTETHRRIVNVDLKFPPFL 236
Query: 992 SPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
S + DL++KLL RL +G V HPW +
Sbjct: 237 SDGSKDLISKLLRYHPPQRLPLKG---VMEHPWVK 268
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis Of
A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 67 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R +CG DYL PE+++G+
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGR 182
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 240
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 241 LLKHNP-----SQRPMLREVLEHPW 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 66 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R +CG DYL PE+++G+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 239
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 240 LLKHNP-----SQRPMLREVLEHPW 259
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 79/165 (47%), Gaps = 5/165 (3%)
Query: 862 HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN 921
H DEQ + + AL H+R V++R + P+ L++ G L++ DF +
Sbjct: 108 HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167
Query: 922 RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA 981
R +CG DYL PE+++GK H D W GVL Y L G PF S S + +I
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS--PSHTETHRRIV 225
Query: 982 KGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
L P LS + DL++KLL RL +G V HPW +
Sbjct: 226 NVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKG---VMEHPWVK 267
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 69 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R +CG DYL PE+++G+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGR 184
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 242
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 243 LLKHNP-----SQRPMLREVLEHPW 262
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 92 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 147
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R +CG DYL PE+++G+
Sbjct: 148 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGR 207
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 265
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 266 LLKHNP-----SQRPMLREVLEHPW 285
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 66 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R +CG DYL PE+++G+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 239
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 240 LLKHNP-----SQRPMLREVLEHPW 259
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 760 ISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKE 819
+S + +L D E + L + L + S+ L+LK K +++ G E Q+ +E
Sbjct: 4 MSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 820 KNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCA 874
+ + + ++ D+ L+L PL ++ + DEQ
Sbjct: 64 VEIQSHLR-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYI 119
Query: 875 ASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLA 934
+ AL H + V++R + P+ L+L +G L++ DF + +R +CG DYL
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 179
Query: 935 PEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPE 994
PE+++G+ H D W+LGVL Y L G+ PF + + + +I++ + + P ++
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEG 237
Query: 995 AVDLLTKLLVVDENTRLGSQGPT--SVKTHPW 1024
A DL+++LL + SQ P V HPW
Sbjct: 238 ARDLISRLLKHNP-----SQRPMLREVLEHPW 264
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 12/262 (4%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDL 884
+ ++ D+ L+L + L + DEQ + AL
Sbjct: 71 R-HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHG 944
H + V++R + P+ L+L +G L++ DF + +R T+CG DYL PE+++G+ H
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 189
Query: 945 LAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLV 1004
D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++LL
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 247
Query: 1005 VDENTRLGSQGPT--SVKTHPW 1024
+ SQ P V HPW
Sbjct: 248 HNP-----SQRPMLREVLEHPW 264
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 69 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R +CG DYL PE+++G+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGR 184
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 242
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 243 LLKHNP-----SQRPMLREVLEHPW 262
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 140/302 (46%), Gaps = 62/302 (20%)
Query: 112 KANQDSFCIHTPFGTSQDD-HFFGVFDGHGEFGAQCSQFVK---RKLCENLLRNNKFHED 167
K N+D F F D+ +F V+DGHG G + F K +LL K E
Sbjct: 134 KENEDRF----DFAQLTDEVLYFAVYDGHG--GPAAADFCHTHMEKCIMDLLPKEKNLET 187
Query: 168 -------AVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVR-GRTIYVANSGDSRAVL 219
+D SS+ ++L AD + SGTTA L+R G + VA+ GDSRA+L
Sbjct: 188 LLTLAFLEIDKAFSSH----ARLSADATLLT-SGTTATVALLRDGIELVVASVGDSRAIL 242
Query: 220 AERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDG 279
R+GK + L+ID TP R+DE ER+K G V L P V
Sbjct: 243 C-RKGK---PMKLTIDHTPERKDEKERIKKCGGFV----AWNSLGQPHV----------- 283
Query: 280 DPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTN-DHPFFVLASDGVFEF 338
NG A TRSIGD +T GV+A PE +L + D F VL +DG+
Sbjct: 284 --------NGRL---AMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFM 332
Query: 339 LSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHING---LKNTAVN 395
++SQ + D V + DP +A A+ ++ +QY T D+ T +VV KN+ +N
Sbjct: 333 VNSQEICDFVNQCHDPNEAAHAVTEQA----IQYGTE-DNSTAVVVPFGAWGKYKNSEIN 387
Query: 396 QS 397
S
Sbjct: 388 FS 389
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAAL 881
+ ++ D+ L+L PL ++ + DEQ + AL
Sbjct: 67 R-HPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
H + V++R + P+ L+L +G L++ DF + +R T+ G DYL PE+++G+
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGR 182
Query: 942 GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
H D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISR 240
Query: 1002 LLVVDENTRLGSQGPT--SVKTHPW 1024
LL + SQ P V HPW
Sbjct: 241 LLKHNP-----SQRPMLREVLEHPW 260
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 132/285 (46%), Gaps = 58/285 (20%)
Query: 112 KANQDSFCIHTPFGTSQDD-HFFGVFDGHGEFGAQCSQFVK---RKLCENLLRNNKFHED 167
K N+D F F D+ +F V+DGHG G + F K +LL K E
Sbjct: 20 KENEDRF----DFAQLTDEVLYFAVYDGHG--GPAAADFCHTHMEKCIMDLLPKEKNLET 73
Query: 168 -------AVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVR-GRTIYVANSGDSRAVL 219
+D SS+ ++L AD + SGTTA L+R G + VA+ GDSRA+L
Sbjct: 74 LLTLAFLEIDKAFSSH----ARLSADATLLT-SGTTATVALLRDGIELVVASVGDSRAIL 128
Query: 220 AERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDG 279
R+GK + L+ID TP R+DE ER+K G V L P V
Sbjct: 129 C-RKGKPM---KLTIDHTPERKDEKERIKKCGGFV----AWNSLGQPHV----------- 169
Query: 280 DPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTN-DHPFFVLASDGVFEF 338
NG A TRSIGD +T GV+A PE +L + D F VL +DG+
Sbjct: 170 --------NGRL---AMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFM 218
Query: 339 LSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIV 383
++SQ + D V + DP +A A+ ++ +QY T + V+V
Sbjct: 219 VNSQEICDFVNQCHDPNEAAHAVTEQA----IQYGTEDNSTAVVV 259
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 136/298 (45%), Gaps = 77/298 (25%)
Query: 131 HFFGVFDGHGEFGAQCSQFVKRK----LCENLLR-------NNKFHEDAVDACHSSYLTT 179
HFFGV+DGHG G+Q + + + + L E +++ + + E A +S++
Sbjct: 60 HFFGVYDGHG--GSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRV 117
Query: 180 NSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPF 239
+S++ G+T+V +V I+VAN GDSRAVL RGK +A LS+D P
Sbjct: 118 DSEIETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLC--RGKTPLA--LSVDHKPD 173
Query: 240 REDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRS 299
R+DE R++ +G +V+ W ++ A +RS
Sbjct: 174 RDDEAARIEAAGGKVIR----------------------------WNGARVFGVLAMSRS 205
Query: 300 IGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKY-------- 351
IGD + V+ +PE+ + +LASDG+++ ++++ V D+ K
Sbjct: 206 IGDRYLKP-SVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARKRILLWHKKN 264
Query: 352 ----------------KDPRDACAAIVAESY--RLWLQYETRTDDITVIVVHINGLKN 391
KDP AA+ A Y ++ LQ ++ D+I+V+VV + G++
Sbjct: 265 AMAGEALLPAEKRGEGKDP----AAMSAAEYLSKMALQKGSK-DNISVVVVDLKGIRK 317
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 98/177 (55%), Gaps = 16/177 (9%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSP-DVLMLDKSGH---LQLVDFRFGKGLSG 920
E+ A ++ +E LH +GV++R + P ++L +D+SG+ +++ DF F K L
Sbjct: 113 FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
Query: 921 NRTF--TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSW-RESEIDIV 977
T C A+++APE+++ +G+ A D W+LGVL+Y L G PF + ++ +I+
Sbjct: 173 ENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEIL 232
Query: 978 AKIAKGQLSLP----QNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDW 1030
A+I G+ SL ++S A DL++K L VD + RL + V HPW V W
Sbjct: 233 ARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTA---ALVLRHPWI--VHW 284
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 17/177 (9%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML-DKSGHLQL--VDFRFG--KGLS 919
E A + +V+A+ +H GV++R + P+ L+ D++ +L++ +DF F K
Sbjct: 103 FSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRE-----SEI 974
T C Y APE++ G+ + D W+LGV++Y ML G++PF S S +
Sbjct: 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAV 222
Query: 975 DIVAKIAKGQLSLP----QNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRD 1027
+I+ KI KG S +N+S EA DL+ LL VD N RL G ++ + W +D
Sbjct: 223 EIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSG---LRYNEWLQD 276
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRT 923
+ EQ AR +++A+E H+ +++R + P+ L+LD+ ++++ DF ++ GN
Sbjct: 110 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 169
Query: 924 FTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T CG +Y APE++ GK + G D W+ GV++Y ML +PF ES + I+
Sbjct: 170 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFKNISN 227
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
G +LP+ LSP A L+ ++L+V+ R+ + WF+
Sbjct: 228 GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIH---EIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRT 923
+ EQ AR +++A+E H+ +++R + P+ L+LD+ ++++ DF ++ GN
Sbjct: 109 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 168
Query: 924 FTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T CG +Y APE++ GK + G D W+ GV++Y ML +PF ES + I+
Sbjct: 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFKNISN 226
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
G +LP+ LSP A L+ ++L+V+ R+ + WF+
Sbjct: 227 GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIH---EIMQDDWFK 267
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRT 923
+ EQ AR +++A+E H+ +++R + P+ L+LD+ ++++ DF ++ GN
Sbjct: 100 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 159
Query: 924 FTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T CG +Y APE++ GK + G D W+ GV++Y ML +PF ES + I+
Sbjct: 160 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFKNISN 217
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
G +LP+ LSP A L+ ++L+V+ R+ + WF+
Sbjct: 218 GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIH---EIMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRT 923
+ EQ AR +++A+E H+ +++R + P+ L+LD+ ++++ DF ++ GN
Sbjct: 104 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 163
Query: 924 FTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T CG +Y APE++ GK + G D W+ GV++Y ML +PF ES + I+
Sbjct: 164 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFKNISN 221
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
G +LP+ LSP A L+ ++L+V+ R+ + WF+
Sbjct: 222 GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIH---EIMQDDWFK 262
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 7/164 (4%)
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS--GN 921
P E AR ++ + LH G+L+R ++ L+L ++ ++++ DF L
Sbjct: 108 PFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167
Query: 922 RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA 981
+ +T+CG +Y++PEI HGL +D W+LG + Y +L G PF + ++ + + K+
Sbjct: 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT--DTVKNTLNKVV 225
Query: 982 KGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
+P LS EA DL+ +LL + RL +SV HP+
Sbjct: 226 LADYEMPSFLSIEAKDLIHQLLRRNPADRLSL---SSVLDHPFM 266
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 127/266 (47%), Gaps = 24/266 (9%)
Query: 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVP 833
R+C++ C E + ++ + FS ++V+ L + LKE ++++ VS +
Sbjct: 34 RRCIHKPTCKEYAVKII----DVTGGGSFSAEEVQELRE--ATLKEVDILRKVSGHPNII 87
Query: 834 QILCTCADSMHAGLLLNTYLACPLASIL--HTPLDEQSARFCAASVVAALEDLHKRGVLY 891
Q+ T + L+ + L L L E+ R +++ + LHK +++
Sbjct: 88 QLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH 147
Query: 892 RGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFTICGMADYLAPEIVQ------GKGHG 944
R + P+ ++LD +++L DF F L G + ++CG YLAPEI++ G+G
Sbjct: 148 RDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYG 207
Query: 945 LAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG--QLSLPQ--NLSPEAVDLLT 1000
D W+ GV++Y +L G PF W ++ ++ I G Q P+ + S DL++
Sbjct: 208 KEVDMWSTGVIMYTLLAGSPPF--WHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS 265
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFR 1026
+ LVV R ++ + HP+F+
Sbjct: 266 RFLVVQPQKRYTAEEALA---HPFFQ 288
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 56/273 (20%)
Query: 97 YSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDD--------HFFGVFDGHGEFGAQCSQ 148
Y F S G P+ D + + + G+ D HFFGV+DGHG G+Q +
Sbjct: 11 YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHG--GSQVAN 68
Query: 149 FVKRK----LCENLLRNNKFHEDA-------VDACHSSYLTTNSQLHADVLDDSMSGTTA 197
+ + + L E + + D A +S+L +S++ + + G+T+
Sbjct: 69 YCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIES--VAPETVGSTS 126
Query: 198 VTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTL 257
V +V I+VAN GDSRAVL RGK A+ LS+D P REDE R++ +G +V+
Sbjct: 127 VVAVVFPSHIFVANCGDSRAVLC--RGK--TALPLSVDHKPDREDEAARIEAAGGKVIQ- 181
Query: 258 DQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIV 317
W ++ A +RSIGD + ++ +PE+
Sbjct: 182 ---------------------------WNGARVFGVLAMSRSIGDRYLKP-SIIPDPEVT 213
Query: 318 VWELTNDHPFFVLASDGVFEFLSSQAVVDMVAK 350
+ + +LASDGV++ ++ + +M K
Sbjct: 214 AVKRVKEDDCLILASDGVWDVMTDEEACEMARK 246
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ H + E+ AR +V+A++ H++ +++R + + L+LD ++++ DF F +
Sbjct: 105 VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
Query: 920 -GNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
GN+ T CG Y APE+ QGK + G D W+LGV++Y ++ G +PF E+
Sbjct: 165 FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR-- 222
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
++ +G+ +P +S + +LL K L+++ + R
Sbjct: 223 ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKR 255
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ H + E+ AR +V+A++ H++ +++R + + L+LD ++++ DF F +
Sbjct: 105 VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
Query: 920 -GNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
GN+ T CG Y APE+ QGK + G D W+LGV++Y ++ G +PF E+
Sbjct: 165 FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR-- 222
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
++ +G+ +P +S + +LL K L+++ + R
Sbjct: 223 ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKR 255
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ H + E+ AR +V+A++ H++ +++R + + L+LD ++++ DF F +
Sbjct: 105 VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
Query: 920 -GNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
GN+ T CG Y APE+ QGK + G D W+LGV++Y ++ G +PF E+
Sbjct: 165 FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR-- 222
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
++ +G+ +P +S + +LL K L+++ + R
Sbjct: 223 ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKR 255
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex
With Inhibitor Pv1533
Length = 322
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 48/287 (16%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC-----------LGKEVQVLKEKNLM 823
K L S C E+ L R + +++K SK+K + E+++LK+ N
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-- 72
Query: 824 KSVSPSACVPQI--------LCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAA 875
C+ +I + M G L + + + L E + +
Sbjct: 73 -----HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG-------NKRLKEATCKLYFY 120
Query: 876 SVVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFGKGLSGNRTF-TICGMAD 931
++ A++ LH+ G+++R + P+ ++L ++ +++ DF K L T+CG
Sbjct: 121 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 180
Query: 932 YLAPEI---VQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLS-L 987
YLAPE+ V G+ A D W+LGV+++ L G PF R +++ + +I G+ + +
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR-TQVSLKDQITSGKYNFI 239
Query: 988 PQ---NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
P+ +S +A+DL+ KLLVVD R ++ HPW +D D K
Sbjct: 240 PEVWAEVSEKALDLVKKLLVVDPKARFTTE---EALRHPWLQDEDMK 283
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 48/287 (16%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC-----------LGKEVQVLKEKNLM 823
K L S C E+ L R + +++K SK+K + E+++LK+ N
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-- 73
Query: 824 KSVSPSACVPQI--------LCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAA 875
C+ +I + M G L + + + L E + +
Sbjct: 74 -----HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG-------NKRLKEATCKLYFY 121
Query: 876 SVVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFGKGLSGNRTF-TICGMAD 931
++ A++ LH+ G+++R + P+ ++L ++ +++ DF K L T+CG
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 181
Query: 932 YLAPEI---VQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLS-L 987
YLAPE+ V G+ A D W+LGV+++ L G PF R +++ + +I G+ + +
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR-TQVSLKDQITSGKYNFI 240
Query: 988 PQ---NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
P+ +S +A+DL+ KLLVVD R ++ HPW +D D K
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTE---EALRHPWLQDEDMK 284
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 126/266 (47%), Gaps = 24/266 (9%)
Query: 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVP 833
R+C++ C E + ++ + FS ++V+ L + LKE ++++ VS +
Sbjct: 34 RRCIHKPTCKEYAVKII----DVTGGGSFSAEEVQELRE--ATLKEVDILRKVSGHPNII 87
Query: 834 QILCTCADSMHAGLLLNTYLACPLASIL--HTPLDEQSARFCAASVVAALEDLHKRGVLY 891
Q+ T + L+ + L L L E+ R +++ + LHK +++
Sbjct: 88 QLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH 147
Query: 892 RGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFTICGMADYLAPEIVQ------GKGHG 944
R + P+ ++LD +++L DF F L G + +CG YLAPEI++ G+G
Sbjct: 148 RDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYG 207
Query: 945 LAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG--QLSLPQ--NLSPEAVDLLT 1000
D W+ GV++Y +L G PF W ++ ++ I G Q P+ + S DL++
Sbjct: 208 KEVDMWSTGVIMYTLLAGSPPF--WHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS 265
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFR 1026
+ LVV R ++ + HP+F+
Sbjct: 266 RFLVVQPQKRYTAEEALA---HPFFQ 288
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And Potentiation
Of Cytotoxic Drugs By Novel Chk2 Inhibitor Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 48/287 (16%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC-----------LGKEVQVLKEKNLM 823
K L S C E+ L R + +++K SK+K + E+++LK+ N
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-- 73
Query: 824 KSVSPSACVPQI--------LCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAA 875
C+ +I + M G L + + + L E + +
Sbjct: 74 -----HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG-------NKRLKEATCKLYFY 121
Query: 876 SVVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFGKGLSGNRTF-TICGMAD 931
++ A++ LH+ G+++R + P+ ++L ++ +++ DF K L T+CG
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 181
Query: 932 YLAPEI---VQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLS-L 987
YLAPE+ V G+ A D W+LGV+++ L G PF R +++ + +I G+ + +
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR-TQVSLKDQITSGKYNFI 240
Query: 988 PQ---NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
P+ +S +A+DL+ KLLVVD R ++ HPW +D D K
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTE---EALRHPWLQDEDMK 284
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 48/287 (16%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC-----------LGKEVQVLKEKNLM 823
K L S C E+ L R + +++K SK+K + E+++LK+ N
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-- 73
Query: 824 KSVSPSACVPQI--------LCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAA 875
C+ +I + M G L + + + L E + +
Sbjct: 74 -----HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG-------NKRLKEATCKLYFY 121
Query: 876 SVVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFGKGLSGNRTF-TICGMAD 931
++ A++ LH+ G+++R + P+ ++L ++ +++ DF K L T+CG
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 181
Query: 932 YLAPEI---VQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLS-L 987
YLAPE+ V G+ A D W+LGV+++ L G PF R +++ + +I G+ + +
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR-TQVSLKDQITSGKYNFI 240
Query: 988 PQ---NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
P+ +S +A+DL+ KLLVVD R ++ HPW +D D K
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTE---EALRHPWLQDEDMK 284
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 123/273 (45%), Gaps = 56/273 (20%)
Query: 97 YSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDD--------HFFGVFDGHGEFGAQCSQ 148
Y F S G P+ D + + + G+ D HFFGV+DGHG G+Q +
Sbjct: 26 YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHG--GSQVAN 83
Query: 149 FVKRK----LCENLLR-------NNKFHEDAVDACHSSYLTTNSQLHADVLDDSMSGTTA 197
+ + + L E + + + + E A +S+L +S++ + + G+T+
Sbjct: 84 YCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIES--VAPETVGSTS 141
Query: 198 VTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTL 257
V +V I+VAN GDSRAVL RGK A+ LS+D P REDE R++ +G +V+
Sbjct: 142 VVAVVFPSHIFVANCGDSRAVLC--RGK--TALPLSVDHKPDREDEAARIEAAGGKVIQ- 196
Query: 258 DQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIV 317
W ++ A +RSIGD + ++ +PE+
Sbjct: 197 ---------------------------WNGARVFGVLAMSRSIGDRYLKP-SIIPDPEVT 228
Query: 318 VWELTNDHPFFVLASDGVFEFLSSQAVVDMVAK 350
+ + +LASDGV++ ++ + +M K
Sbjct: 229 AVKRVKEDDCLILASDGVWDVMTDEEACEMARK 261
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 123/273 (45%), Gaps = 56/273 (20%)
Query: 97 YSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDD--------HFFGVFDGHGEFGAQCSQ 148
Y F S G P+ D + + + G+ D HFFGV+DGHG G+Q +
Sbjct: 14 YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHG--GSQVAN 71
Query: 149 FVKRK----LCENLLR-------NNKFHEDAVDACHSSYLTTNSQLHADVLDDSMSGTTA 197
+ + + L E + + + + E A +S+L +S++ + + G+T+
Sbjct: 72 YCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIES--VAPETVGSTS 129
Query: 198 VTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTL 257
V +V I+VAN GDSRAVL RGK A+ LS+D P REDE R++ +G +V+
Sbjct: 130 VVAVVFPSHIFVANCGDSRAVLC--RGK--TALPLSVDHKPDREDEAARIEAAGGKVIQ- 184
Query: 258 DQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIV 317
W ++ A +RSIGD + ++ +PE+
Sbjct: 185 ---------------------------WNGARVFGVLAMSRSIGDRYLKP-SIIPDPEVT 216
Query: 318 VWELTNDHPFFVLASDGVFEFLSSQAVVDMVAK 350
+ + +LASDGV++ ++ + +M K
Sbjct: 217 AVKRVKEDDCLILASDGVWDVMTDEEACEMARK 249
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound To
The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 48/287 (16%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC-----------LGKEVQVLKEKNLM 823
K L S C E+ L R + +++K SK+K + E+++LK+ N
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-- 79
Query: 824 KSVSPSACVPQI--------LCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAA 875
C+ +I + M G L + + + L E + +
Sbjct: 80 -----HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG-------NKRLKEATCKLYFY 127
Query: 876 SVVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFGKGLSGNRTF-TICGMAD 931
++ A++ LH+ G+++R + P+ ++L ++ +++ DF K L T+CG
Sbjct: 128 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 187
Query: 932 YLAPEI---VQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLS-L 987
YLAPE+ V G+ A D W+LGV+++ L G PF R +++ + +I G+ + +
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR-TQVSLKDQITSGKYNFI 246
Query: 988 PQ---NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
P+ +S +A+DL+ KLLVVD R ++ HPW +D D K
Sbjct: 247 PEVWAEVSEKALDLVKKLLVVDPKARFTTE---EALRHPWLQDEDMK 290
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS--GNR 922
L E AR+ +V + LH+ V++R + L L++ +++ DF + G R
Sbjct: 118 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 177
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T+CG +Y+APE++ KGH D W++G ++Y +L G+ PF + E + +I K
Sbjct: 178 KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL--RIKK 235
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
+ S+P++++P A L+ K+L D R
Sbjct: 236 NEYSIPKHINPVAASLIQKMLQTDPTAR 263
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A 2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS--GNR 922
L E AR+ +V + LH+ V++R + L L++ +++ DF + G R
Sbjct: 114 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 173
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T+CG +Y+APE++ KGH D W++G ++Y +L G+ PF + E + +I K
Sbjct: 174 KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL--RIKK 231
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
+ S+P++++P A L+ K+L D R
Sbjct: 232 NEYSIPKHINPVAASLIQKMLQTDPTAR 259
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS--GNR 922
L E AR+ +V + LH+ V++R + L L++ +++ DF + G R
Sbjct: 114 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 173
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T+CG +Y+APE++ KGH D W++G ++Y +L G+ PF + E + +I K
Sbjct: 174 KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL--RIKK 231
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
+ S+P++++P A L+ K+L D R
Sbjct: 232 NEYSIPKHINPVAASLIQKMLQTDPTAR 259
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 86/163 (52%), Gaps = 7/163 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRT 923
+ E R ++ A+E H+ +++R + P+ L+LD + ++++ DF ++ GN
Sbjct: 105 MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFL 164
Query: 924 FTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T CG +Y APE++ GK + G D W+ G+++Y ML G +PF E ++ K+
Sbjct: 165 KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD--EFIPNLFKKVNS 222
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
+P LSP A L+ +++V D R+ Q ++ PWF
Sbjct: 223 CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQ---EIRRDPWF 262
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 126/266 (47%), Gaps = 24/266 (9%)
Query: 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVP 833
R+C++ C E + ++ + FS ++V+ L + LKE ++++ VS +
Sbjct: 21 RRCIHKPTCKEYAVKII----DVTGGGSFSAEEVQELRE--ATLKEVDILRKVSGHPNII 74
Query: 834 QILCTCADSMHAGLLLNTYLACPLASIL--HTPLDEQSARFCAASVVAALEDLHKRGVLY 891
Q+ T + L+ + L L L E+ R +++ + LHK +++
Sbjct: 75 QLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH 134
Query: 892 RGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFTICGMADYLAPEIVQ------GKGHG 944
R + P+ ++LD +++L DF F L G + +CG YLAPEI++ G+G
Sbjct: 135 RDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYG 194
Query: 945 LAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG--QLSLPQ--NLSPEAVDLLT 1000
D W+ GV++Y +L G PF W ++ ++ I G Q P+ + S DL++
Sbjct: 195 KEVDMWSTGVIMYTLLAGSPPF--WHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS 252
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFR 1026
+ LVV R ++ + HP+F+
Sbjct: 253 RFLVVQPQKRYTAEEALA---HPFFQ 275
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 12/262 (4%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
+L D E + L + L + S+ L+LK K +++ G E Q+ +E + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDL 884
+ ++ D+ L+L + L + DEQ + AL
Sbjct: 71 R-HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHG 944
H + V++R + P+ L+L +G L++ DF + +R + G DYL PE+++G+ H
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHD 189
Query: 945 LAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLV 1004
D W+LGVL Y L G+ PF + + + +I++ + + P ++ A DL+++LL
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 247
Query: 1005 VDENTRLGSQGPT--SVKTHPW 1024
+ SQ P V HPW
Sbjct: 248 HNP-----SQRPMLREVLEHPW 264
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
Length = 319
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ H + E+ AR +V+A++ H++ +++R + + L+LD ++++ DF F +
Sbjct: 98 VAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 157
Query: 920 -GNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
GN+ T CG Y APE+ QGK + G D W+LGV++Y ++ G +PF E+
Sbjct: 158 FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR-- 215
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
++ +G+ +P +S + +LL K L+++ + R
Sbjct: 216 ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKR 248
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 128/270 (47%), Gaps = 35/270 (12%)
Query: 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEK-------NLMKSV 826
R+C++ E + ++ + LS ++ + + + +E +L++ L+ S
Sbjct: 111 RRCVHRATGHEFAVKIMEVTAERLSPEQLEEVR-EATRRETHILRQVAGHPHIITLIDSY 169
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHK 886
S+ + D M G L + YL +A L E+ R S++ A+ LH
Sbjct: 170 ESSS----FMFLVFDLMRKGELFD-YLTEKVA------LSEKETRSIMRSLLEAVSFLHA 218
Query: 887 RGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFTICGMADYLAPEIVQ------ 939
+++R + P+ ++LD + ++L DF F L G + +CG YLAPEI++
Sbjct: 219 NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDET 278
Query: 940 GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG--QLSLPQ--NLSPEA 995
G+G D WA GV+++ +L G PF W +I ++ I +G Q S P+ + S
Sbjct: 279 HPGYGKEVDLWACGVILFTLLAGSPPF--WHRRQILMLRMIMEGQYQFSSPEWDDRSSTV 336
Query: 996 VDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
DL+++LL VD RL ++ HP+F
Sbjct: 337 KDLISRLLQVDPEARLTAE---QALQHPFF 363
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 86/153 (56%), Gaps = 4/153 (2%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ H + E+ AR +V+A++ H++ +++R + + L+LD ++++ DF F +
Sbjct: 105 VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
Query: 920 -GNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
GN+ CG Y APE+ QGK + G D W+LGV++Y ++ G +PF E+
Sbjct: 165 FGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR-- 222
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
++ +G+ +P +S + +LL K L+++ + R
Sbjct: 223 ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKR 255
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 133/287 (46%), Gaps = 48/287 (16%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC-----------LGKEVQVLKEKNLM 823
K L S C E+ L R + ++++ SK+K + E+++LK+ N
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN-- 212
Query: 824 KSVSPSACVPQI--------LCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAA 875
C+ +I + M G L + + + L E + +
Sbjct: 213 -----HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG-------NKRLKEATCKLYFY 260
Query: 876 SVVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFGKGLSGNRTF-TICGMAD 931
++ A++ LH+ G+++R + P+ ++L ++ +++ DF K L T+CG
Sbjct: 261 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 320
Query: 932 YLAPEI---VQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLS-L 987
YLAPE+ V G+ A D W+LGV+++ L G PF R +++ + +I G+ + +
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR-TQVSLKDQITSGKYNFI 379
Query: 988 PQ---NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
P+ +S +A+DL+ KLLVVD R ++ HPW +D D K
Sbjct: 380 PEVWAEVSEKALDLVKKLLVVDPKARFTTE---EALRHPWLQDEDMK 423
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 133/287 (46%), Gaps = 48/287 (16%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC-----------LGKEVQVLKEKNLM 823
K L S C E+ L R + ++++ SK+K + E+++LK+ N
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN-- 198
Query: 824 KSVSPSACVPQI--------LCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAA 875
C+ +I + M G L + + + L E + +
Sbjct: 199 -----HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG-------NKRLKEATCKLYFY 246
Query: 876 SVVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFGKGLSGNRTF-TICGMAD 931
++ A++ LH+ G+++R + P+ ++L ++ +++ DF K L T+CG
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 306
Query: 932 YLAPEI---VQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLS-L 987
YLAPE+ V G+ A D W+LGV+++ L G PF R +++ + +I G+ + +
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR-TQVSLKDQITSGKYNFI 365
Query: 988 PQ---NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
P+ +S +A+DL+ KLLVVD R ++ HPW +D D K
Sbjct: 366 PEVWAEVSEKALDLVKKLLVVDPKARFTTE---EALRHPWLQDEDMK 409
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
Length = 327
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 86/153 (56%), Gaps = 4/153 (2%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ H + E+ AR +V+A++ H++ +++R + + L+LD ++++ DF F +
Sbjct: 105 VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
Query: 920 -GNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
GN+ CG Y APE+ QGK + G D W+LGV++Y ++ G +PF E+
Sbjct: 165 FGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR-- 222
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
++ +G+ +P +S + +LL K L+++ + R
Sbjct: 223 ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKR 255
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS--GNR 922
L E AR+ +V + LH+ V++R + L L++ +++ DF + G R
Sbjct: 136 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 195
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
+CG +Y+APE++ KGH D W++G ++Y +L G+ PF + E + +I K
Sbjct: 196 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL--RIKK 253
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
+ S+P++++P A L+ K+L D R
Sbjct: 254 NEYSIPKHINPVAASLIQKMLQTDPTAR 281
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS--GNR 922
L E AR+ +V + LH+ V++R + L L++ +++ DF + G R
Sbjct: 138 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 197
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
+CG +Y+APE++ KGH D W++G ++Y +L G+ PF + E + +I K
Sbjct: 198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL--RIKK 255
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
+ S+P++++P A L+ K+L D R
Sbjct: 256 NEYSIPKHINPVAASLIQKMLQTDPTAR 283
>pdb|3IDB|B Chain B, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
Length = 161
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
H KT ++ ++ A D LF+ L Q +LD M V+ G+ V+ QG +GD FYV+
Sbjct: 26 HPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVI 85
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
G F++ K V R + Y + SFGELALMYN P A++ A + G LW L
Sbjct: 86 DRGTFDIYV----KCDGVGRCVGNY--DNRGSFGELALMYNTPRAATITATSPGALWGLD 139
Query: 581 REDFRGILMSEFSNLSSLKLLRS 603
R FR I++ +N K+ S
Sbjct: 140 RVTFRRIIVK--NNAKKRKMYES 160
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 37/196 (18%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGKGLSGN 921
+E+ A V AAL+ LH +G+ +R + P+ ++ + K +++ DF G G+ N
Sbjct: 108 FNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLN 167
Query: 922 RTFTI---------CGMADYLAPEIV-----QGKGHGLAADWWALGVLIYFMLQGEMPF- 966
+ T CG A+Y+APE+V Q + D W+LGV++Y ML G PF
Sbjct: 168 NSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFV 227
Query: 967 ------GSWRESEI------DIVAKIAKGQLSLPQ----NLSPEAVDLLTKLLVVDENTR 1010
W E+ + I +G+ P ++S EA DL++KLLV D R
Sbjct: 228 GHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQR 287
Query: 1011 LGSQGPTSVKTHPWFR 1026
L + V HPW +
Sbjct: 288 LSA---AQVLQHPWVQ 300
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS--GNR 922
L E AR+ +V + LH+ V++R + L L++ +++ DF + G R
Sbjct: 112 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 171
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
+CG +Y+APE++ KGH D W++G ++Y +L G+ PF + E + +I K
Sbjct: 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL--RIKK 229
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
+ S+P++++P A L+ K+L D R
Sbjct: 230 NEYSIPKHINPVAASLIQKMLQTDPTAR 257
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGKGLSGNRT 923
E A C ++ A+ H+ GV++R + P+ L+L K ++L DF + G +
Sbjct: 109 EADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168
Query: 924 --FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA 981
F G YL+PE+++ +G D WA GV++Y +L G PF W E + + +I
Sbjct: 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF--WDEDQHRLYQQIK 226
Query: 982 KGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPW 1024
G P ++PEA DL+ K+L ++ + R+ + HPW
Sbjct: 227 AGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITA---AEALKHPW 270
>pdb|3IDC|B Chain B, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
Length = 164
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
H KT ++ ++ A D LF+ L Q +LD M V+ G+ V+ QG +GD FYV+
Sbjct: 32 HPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVI 91
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
G F++ K V R + Y + SFGELALMYN P A++ A + G LW L
Sbjct: 92 DRGTFDIYV----KCDGVGRCVGNY--DNRGSFGELALMYNTPRAATITATSPGALWGLD 145
Query: 581 REDFRGILMS 590
R FR I++
Sbjct: 146 RVTFRRIIVK 155
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 84/153 (54%), Gaps = 4/153 (2%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ H E+ AR +V+A++ H++ +++R + + L+LD ++++ DF F +
Sbjct: 105 VAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFT 164
Query: 920 -GNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
GN+ CG Y APE+ QGK + G D W+LGV++Y ++ G +PF E+
Sbjct: 165 FGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR-- 222
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
++ +G+ +P S + +LL K L+++ + R
Sbjct: 223 ERVLRGKYRIPFYXSTDCENLLKKFLILNPSKR 255
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
DEQ + AL H + V++R + P+ L+L G L++ DF + R
Sbjct: 120 FDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK 179
Query: 925 TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQ 984
T+CG DYL PE+++G+ H D W +GVL Y +L G PF S +E +I K
Sbjct: 180 TMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE--TYRRIVKVD 237
Query: 985 LSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
L P ++ A DL++KLL + + RL V HPW R
Sbjct: 238 LKFPASVPTGAQDLISKLLRHNPSERLPL---AQVSAHPWVR 276
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 14/168 (8%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFGKGLSGNRT 923
E A C ++ ++ H G+++R + P+ L+L K ++L DF + G++
Sbjct: 102 EADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ 161
Query: 924 --FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA 981
F G YL+PE+++ +G D WA GV++Y +L G PF W E + + +I
Sbjct: 162 AWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF--WDEDQHRLYQQIK 219
Query: 982 KGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
G P ++PEA DL+ K+L ++ R+ + + HPW
Sbjct: 220 AGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITA---SEALKHPWI 264
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 14/168 (8%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGKGLSGNRT 923
E A C ++ A+ H+ GV++R + P+ L+L K ++L DF + G +
Sbjct: 120 EADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 179
Query: 924 --FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA 981
F G YL+PE+++ +G D WA GV++Y +L G PF W E + + +I
Sbjct: 180 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF--WDEDQHRLYQQIK 237
Query: 982 KGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
G P ++PEA DL+ K+L ++ + R+ + HPW
Sbjct: 238 AGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITA---AEALKHPWI 282
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 14/168 (8%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFGKGLSGNRT 923
E A C ++ ++ H G+++R + P+ L+L K ++L DF + G++
Sbjct: 102 EADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ 161
Query: 924 --FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA 981
F G YL+PE+++ +G D WA GV++Y +L G PF W E + + +I
Sbjct: 162 AWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF--WDEDQHRLYQQIK 219
Query: 982 KGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
G P ++PEA DL+ K+L ++ R+ + + HPW
Sbjct: 220 AGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITA---SEALKHPWI 264
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 85/153 (55%), Gaps = 4/153 (2%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ H + E+ AR +V+A++ H++ +++R + + L+LD ++++ DF F +
Sbjct: 103 VAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 162
Query: 920 -GNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
G + T CG Y APE+ QGK + G D W+LGV++Y ++ G +PF E+
Sbjct: 163 VGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR-- 220
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
++ +G+ +P +S + +LL + LV++ R
Sbjct: 221 ERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKR 253
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGKGLSGNRT 923
E A C ++ A+ H+ GV++R + P+ L+L K ++L DF + G++
Sbjct: 102 EADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ 161
Query: 924 --FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA 981
F G YL+PE+++ + +G D WA GV++Y +L G PF W E + + +I
Sbjct: 162 AWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF--WDEDQHKLYQQIK 219
Query: 982 KGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPW 1024
G P ++PEA +L+ ++L ++ R+ + HPW
Sbjct: 220 AGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAH---EALKHPW 263
>pdb|3FHI|B Chain B, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
pdb|3IIA|A Chain A, Crystal Structure Of Apo (91-244) Ria Subunit Of
Camp-Dependent Protein Kinase
pdb|3PLQ|A Chain A, Crystal Structure Of Pka Type I Regulatory Subunit Bound
With Rp-8-Br- Camps
pdb|3PNA|A Chain A, Crystal Structure Of Camp Bound (91-244)ria Subunit Of
Camp-Dependent Protein Kinase
pdb|3PNA|B Chain B, Crystal Structure Of Camp Bound (91-244)ria Subunit Of
Camp-Dependent Protein Kinase
Length = 154
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 10/127 (7%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
K ++ A + +A+ + LF L D++ + D M V AG+ V++QG EGD FYV+
Sbjct: 28 KDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQ 87
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
GE +V E + + SFGELAL+Y P A+V+A TN LW + R+
Sbjct: 88 GEMDVYVNNEWAT----------SVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRD 137
Query: 583 DFRGILM 589
+R ILM
Sbjct: 138 SYRRILM 144
Score = 30.8 bits (68), Expect = 4.8, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 585 RGILMSEFSNLSSL-KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAAL 643
R ++ ++ +++L K + L S L + S + D + VSF AG+T++ +
Sbjct: 23 RKVIPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNF 82
Query: 644 YIIQRGQVRI 653
Y+I +G++ +
Sbjct: 83 YVIDQGEMDV 92
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 7/164 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRT 923
LDE+ +R +++ ++ H+ V++R + P+ ++LD + ++ DF +S G
Sbjct: 113 LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 172
Query: 924 FTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
CG +Y APE++ G+ + G D W+ GV++Y +L G +PF + + KI
Sbjct: 173 RXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD--DHVPTLFKKICD 230
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
G PQ L+P + LL +L VD R + ++ H WF+
Sbjct: 231 GIFYTPQYLNPSVISLLKHMLQVDPMKRATIK---DIREHEWFK 271
>pdb|3PVB|B Chain B, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 160
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 10/127 (7%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
K ++ A + +A+ + LF L D++ + D M V AG+ V++QG EGD FYV+
Sbjct: 35 KDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQ 94
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
GE +V E + + SFGELAL+Y P A+V+A TN LW + R+
Sbjct: 95 GEMDVYVNNEWAT----------SVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRD 144
Query: 583 DFRGILM 589
+R ILM
Sbjct: 145 SYRRILM 151
Score = 30.8 bits (68), Expect = 4.7, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 585 RGILMSEFSNLSSL-KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAAL 643
R ++ ++ +++L K + L S L + S + D + VSF AG+T++ +
Sbjct: 30 RKVIPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNF 89
Query: 644 YIIQRGQVRI 653
Y+I +G++ +
Sbjct: 90 YVIDQGEMDV 99
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS--GNRTF 924
E AR+ + ++ LH V++R + L L+ +++ DF + G R
Sbjct: 141 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK 200
Query: 925 TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQ 984
T+CG +Y+APE++ KGH D W+LG ++Y +L G+ PF + E I +I K +
Sbjct: 201 TLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI--RIKKNE 258
Query: 985 LSLPQNLSPEAVDLLTKLLVVDENTR 1010
S+P++++P A L+ ++L D R
Sbjct: 259 YSVPRHINPVASALIRRMLHADPTLR 284
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 84/153 (54%), Gaps = 4/153 (2%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ H + E+ AR +V+A++ H++ +++R + + L+LD ++++ DF F +
Sbjct: 106 VAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165
Query: 920 -GNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
G + CG Y APE+ QGK + G D W+LGV++Y ++ G +PF E+
Sbjct: 166 VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR-- 223
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
++ +G+ +P +S + +LL + LV++ R
Sbjct: 224 ERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKR 256
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 12/165 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFGKGLSGNRT 923
E+ A V++A++ LH+ G+++R + P+ L+ +++ + + DF K
Sbjct: 105 EKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164
Query: 924 FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG 983
T CG Y+APE++ K + A D W++GV+ Y +L G PF + E+E + KI +G
Sbjct: 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF--YEETESKLFEKIKEG 222
Query: 984 QLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPW 1024
++S A D + LL D N R + S HPW
Sbjct: 223 YYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS---HPW 264
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS--GNRTF 924
E AR+ + ++ LH V++R + L L+ +++ DF + G R
Sbjct: 141 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK 200
Query: 925 TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQ 984
+CG +Y+APE++ KGH D W+LG ++Y +L G+ PF + E I +I K +
Sbjct: 201 XLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI--RIKKNE 258
Query: 985 LSLPQNLSPEAVDLLTKLLVVDENTR 1010
S+P++++P A L+ ++L D R
Sbjct: 259 YSVPRHINPVASALIRRMLHADPTLR 284
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
094
Length = 317
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS--GNRTF 924
E AR+ + ++ LH V++R + L L+ +++ DF + G R
Sbjct: 141 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK 200
Query: 925 TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQ 984
+CG +Y+APE++ KGH D W+LG ++Y +L G+ PF + E I +I K +
Sbjct: 201 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI--RIKKNE 258
Query: 985 LSLPQNLSPEAVDLLTKLLVVDENTR 1010
S+P++++P A L+ ++L D R
Sbjct: 259 YSVPRHINPVASALIRRMLHADPTLR 284
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
562
Length = 301
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS--GNRTF 924
E AR+ + ++ LH V++R + L L+ +++ DF + G R
Sbjct: 125 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK 184
Query: 925 TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQ 984
+CG +Y+APE++ KGH D W+LG ++Y +L G+ PF + E I +I K +
Sbjct: 185 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI--RIKKNE 242
Query: 985 LSLPQNLSPEAVDLLTKLLVVDENTR 1010
S+P++++P A L+ ++L D R
Sbjct: 243 YSVPRHINPVASALIRRMLHADPTLR 268
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 132/317 (41%), Gaps = 85/317 (26%)
Query: 122 TPFGTSQDDHFFGVFDGHG------------EFG-AQCSQFVKRKLCE-NLLRNNKFHED 167
+P T HFFGV+DGHG F A+ + +K +LC+ N + D
Sbjct: 54 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 113
Query: 168 AVDACHSSYLTTNSQLHADV--------------LDDSMSGTTAVTVLVRGRTIYVANSG 213
V S +LT + ++ + + G+TAV LV I V+N G
Sbjct: 114 KVFT--SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCG 171
Query: 214 DSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGT 273
DSRAVL RGKE A+ LS+D P REDE R++ +G +V+
Sbjct: 172 DSRAVLF--RGKE--AMPLSVDHKPDREDEYARIENAGGKVIQ----------------- 210
Query: 274 EEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASD 333
W ++ A +RSIGD + V+ PE+ + + +LASD
Sbjct: 211 -----------WQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASD 258
Query: 334 GVFEFLSSQAVVDMV-------------------AKYKDPRDACAAIVAESYRLWLQYET 374
G+++ +++Q V ++ K DP AC A L LQ +
Sbjct: 259 GLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDP--ACQAAADYLSMLALQKGS 316
Query: 375 RTDDITVIVVHINGLKN 391
+ D+I++IV+ + +
Sbjct: 317 K-DNISIIVIDLKAQRK 332
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 132/317 (41%), Gaps = 85/317 (26%)
Query: 122 TPFGTSQDDHFFGVFDGHG------------EFG-AQCSQFVKRKLCE-NLLRNNKFHED 167
+P T HFFGV+DGHG F A+ + +K +LC+ N + D
Sbjct: 60 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 119
Query: 168 AVDACHSSYLTTNSQLHADV--------------LDDSMSGTTAVTVLVRGRTIYVANSG 213
V S +LT + ++ + + G+TAV LV I V+N G
Sbjct: 120 KVFT--SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCG 177
Query: 214 DSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGT 273
DSRAVL RGKE A+ LS+D P REDE R++ +G +V+
Sbjct: 178 DSRAVLF--RGKE--AMPLSVDHKPDREDEYARIENAGGKVIQ----------------- 216
Query: 274 EEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASD 333
W ++ A +RSIGD + V+ PE+ + + +LASD
Sbjct: 217 -----------WQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASD 264
Query: 334 GVFEFLSSQAVVDMV-------------------AKYKDPRDACAAIVAESYRLWLQYET 374
G+++ +++Q V ++ K DP AC A L LQ +
Sbjct: 265 GLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDP--ACQAAADYLSMLALQKGS 322
Query: 375 RTDDITVIVVHINGLKN 391
+ D+I++IV+ + +
Sbjct: 323 K-DNISIIVIDLKAQRK 338
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 132/317 (41%), Gaps = 85/317 (26%)
Query: 122 TPFGTSQDDHFFGVFDGHG------------EFG-AQCSQFVKRKLCE-NLLRNNKFHED 167
+P T HFFGV+DGHG F A+ + +K +LC+ N + D
Sbjct: 43 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 102
Query: 168 AVDACHSSYLTTNSQLHADV--------------LDDSMSGTTAVTVLVRGRTIYVANSG 213
V S +LT + ++ + + G+TAV LV I V+N G
Sbjct: 103 KVFT--SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCG 160
Query: 214 DSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGT 273
DSRAVL RGKE A+ LS+D P REDE R++ +G +V+
Sbjct: 161 DSRAVLF--RGKE--AMPLSVDHKPDREDEYARIENAGGKVIQ----------------- 199
Query: 274 EEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASD 333
W ++ A +RSIGD + V+ PE+ + + +LASD
Sbjct: 200 -----------WQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASD 247
Query: 334 GVFEFLSSQAVVDMV-------------------AKYKDPRDACAAIVAESYRLWLQYET 374
G+++ +++Q V ++ K DP AC A L LQ +
Sbjct: 248 GLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDP--ACQAAADYLSMLALQKGS 305
Query: 375 RTDDITVIVVHINGLKN 391
+ D+I++IV+ + +
Sbjct: 306 K-DNISIIVIDLKAQRK 321
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ H + E+ AR +V+A++ H++ +++R + + L+LD ++++ DF F +
Sbjct: 106 VAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFT 165
Query: 920 -GNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
GN+ T CG Y APE+ QGK + G D W+LGV++Y ++ G +PF E+
Sbjct: 166 VGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR-- 223
Query: 978 AKIAKGQLSLPQNLS 992
++ +G+ +P +S
Sbjct: 224 ERVLRGKYRIPFYMS 238
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 131/313 (41%), Gaps = 85/313 (27%)
Query: 122 TPFGTSQDDHFFGVFDGHG------------EFG-AQCSQFVKRKLCE-NLLRNNKFHED 167
+P T HFFGV+DGHG F A+ + +K +LC+ N + D
Sbjct: 58 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 117
Query: 168 AVDACHSSYLTTNSQLHADV--------------LDDSMSGTTAVTVLVRGRTIYVANSG 213
V S +LT + ++ + + G+TAV LV I V+N G
Sbjct: 118 KVFT--SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCG 175
Query: 214 DSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGT 273
DSRAVL RGKE A+ LS+D P REDE R++ +G +V+
Sbjct: 176 DSRAVLF--RGKE--AMPLSVDHKPDREDEYARIENAGGKVIQ----------------- 214
Query: 274 EEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASD 333
W ++ A +RSIGD + V+ PE+ + + +LASD
Sbjct: 215 -----------WQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASD 262
Query: 334 GVFEFLSSQAVVDMV-------------------AKYKDPRDACAAIVAESYRLWLQYET 374
G+++ +++Q V ++ K DP AC A L LQ +
Sbjct: 263 GLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDP--ACQAAADYLSMLALQKGS 320
Query: 375 RTDDITVIVVHIN 387
+ D+I++IV+ +
Sbjct: 321 K-DNISIIVIDLK 332
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 132/317 (41%), Gaps = 85/317 (26%)
Query: 122 TPFGTSQDDHFFGVFDGHG------------EFG-AQCSQFVKRKLCE-NLLRNNKFHED 167
+P T HFFGV+DGHG F A+ + +K +LC+ N + D
Sbjct: 67 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 126
Query: 168 AVDACHSSYLTTNSQLHADV--------------LDDSMSGTTAVTVLVRGRTIYVANSG 213
V S +LT + ++ + + G+TAV LV I V+N G
Sbjct: 127 KVFT--SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCG 184
Query: 214 DSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGT 273
DSRAVL RGKE A+ LS+D P REDE R++ +G +V+
Sbjct: 185 DSRAVLF--RGKE--AMPLSVDHKPDREDEYARIENAGGKVIQ----------------- 223
Query: 274 EEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASD 333
W ++ A +RSIGD + V+ PE+ + + +LASD
Sbjct: 224 -----------WQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASD 271
Query: 334 GVFEFLSSQAVVDMV-------------------AKYKDPRDACAAIVAESYRLWLQYET 374
G+++ +++Q V ++ K DP AC A L LQ +
Sbjct: 272 GLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDP--ACQAAADYLSMLALQKGS 329
Query: 375 RTDDITVIVVHINGLKN 391
+ D+I++IV+ + +
Sbjct: 330 K-DNISIIVIDLKAQRK 345
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGKGLSGNRT 923
E A C ++ ++ +H+ +++R + P+ L+L K ++L DF + G +
Sbjct: 129 EADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ 188
Query: 924 --FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA 981
F G YL+PE+++ +G D WA GV++Y +L G PF W E + + +I
Sbjct: 189 AWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF--WDEDQHKLYQQIK 246
Query: 982 KGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPW 1024
G P ++PEA +L+ ++L ++ R+ + HPW
Sbjct: 247 AGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAD---QALKHPW 290
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein
Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain)
Length = 276
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 7/167 (4%)
Query: 862 HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-G 920
H ++E AR +++A++ H+ V++R + P+ ++LD + ++ DF +S G
Sbjct: 105 HGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164
Query: 921 NRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAK 979
T CG +Y APE++ G+ + G D W+ GV++Y +L G +PF E + K
Sbjct: 165 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD--EHVPTLFKK 222
Query: 980 IAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
I G +P+ L+ LL +L VD R + ++ H WF+
Sbjct: 223 IRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIK---DIREHEWFK 266
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 43/212 (20%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL---QLVDFRFGKGLSGN 921
+E A V +AL+ LH +G+ +R + P+ ++ + + ++ DF G G+ N
Sbjct: 108 FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167
Query: 922 ---------RTFTICGMADYLAPEIVQGKGHGLA-----ADWWALGVLIYFMLQGEMPF- 966
T CG A+Y+APE+V+ + D W+LGV++Y +L G PF
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
Query: 967 ---GS---WRESEID------IVAKIAKGQLSLPQ----NLSPEAVDLLTKLLVVDENTR 1010
GS W E + I +G+ P ++S A DL++KLLV D R
Sbjct: 228 GRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQR 287
Query: 1011 LGSQGPTSVKTHPWFRDVDWKGIA-ESTSPVP 1041
L + V HPW +G A E+T P P
Sbjct: 288 LSA---AQVLQHPWV-----QGCAPENTLPTP 311
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 16/198 (8%)
Query: 841 DSMHAGLLLNTYLACPL-ASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898
D + L++ Y L I+H +E A V++ + LHK +++R + P+
Sbjct: 107 DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPEN 166
Query: 899 LMLD---KSGHLQLVDFRFGKGLSGNRTFT-ICGMADYLAPEIVQGKGHGLAADWWALGV 954
L+L+ K +++VDF + G A Y+APE+++ K + D W++GV
Sbjct: 167 LLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKK-YDEKCDVWSIGV 225
Query: 955 LIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLP----QNLSPEAVDLLTKLLVVDENTR 1010
+++ +L G PFG + E I+ K+ KG+ + +N+S A DL+ ++L D R
Sbjct: 226 ILFILLAGYPPFGGQTDQE--ILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRR 283
Query: 1011 LGSQGPTSVKTHPWFRDV 1028
+ +Q HPW +++
Sbjct: 284 ISAQQALE---HPWIKEM 298
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 43/212 (20%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL---QLVDFRFGKGLSGN 921
+E A V +AL+ LH +G+ +R + P+ ++ + + ++ DF G G+ N
Sbjct: 108 FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLN 167
Query: 922 ---------RTFTICGMADYLAPEIVQGKGHGLA-----ADWWALGVLIYFMLQGEMPF- 966
T CG A+Y+APE+V+ + D W+LGV++Y +L G PF
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
Query: 967 ---GS---WRESEID------IVAKIAKGQLSLPQ----NLSPEAVDLLTKLLVVDENTR 1010
GS W E + I +G+ P ++S A DL++KLLV D R
Sbjct: 228 GRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQR 287
Query: 1011 LGSQGPTSVKTHPWFRDVDWKGIA-ESTSPVP 1041
L + V HPW +G A E+T P P
Sbjct: 288 LSA---AQVLQHPWV-----QGCAPENTLPTP 311
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 128/317 (40%), Gaps = 85/317 (26%)
Query: 122 TPFGTSQDDHFFGVFDGHG--EFGAQCSQFVKRKLCENLLR------------NNKFHED 167
+P T HFFGV+DGHG + C + L E + R + D
Sbjct: 57 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWD 116
Query: 168 AVDACHSSYLTTNSQLHADV--------------LDDSMSGTTAVTVLVRGRTIYVANSG 213
V S +LT + ++ + + G+TAV LV I V+N G
Sbjct: 117 KVFT--SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCG 174
Query: 214 DSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGT 273
DSRAVL RGKE A+ LS+D P REDE R++ +G +V+
Sbjct: 175 DSRAVLF--RGKE--AMPLSVDHKPDREDEYARIENAGGKVIQ----------------- 213
Query: 274 EEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASD 333
W ++ A +RSIGD + V+ PE+ + + +LASD
Sbjct: 214 -----------WQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASD 261
Query: 334 GVFEFLSSQAVVDMV-------------------AKYKDPRDACAAIVAESYRLWLQYET 374
G+++ +++Q V ++ K DP AC A L LQ +
Sbjct: 262 GLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDP--ACQAAADYLSMLALQKGS 319
Query: 375 RTDDITVIVVHINGLKN 391
+ D+I++IV+ + +
Sbjct: 320 K-DNISIIVIDLKAQRK 335
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated
Protein Kinase Alpha-2 Subunit Mutant (T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 862 HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-G 920
H ++E AR +++A++ H+ V++R + P+ ++LD + ++ DF +S G
Sbjct: 105 HGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164
Query: 921 NRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAK 979
CG +Y APE++ G+ + G D W+ GV++Y +L G +PF E + K
Sbjct: 165 EFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD--EHVPTLFKK 222
Query: 980 IAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
I G +P+ L+ LL +L VD R + ++ H WF+
Sbjct: 223 IRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIK---DIREHEWFK 266
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 116/287 (40%), Gaps = 68/287 (23%)
Query: 132 FFGVFDGHGEFGAQCSQFVK--------------RKLCENLLRNNKFHEDAV----DACH 173
FF V+DGHG GA+ +Q+ RK E L+ DA
Sbjct: 53 FFAVYDGHG--GAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVIE 110
Query: 174 SSYLTTNSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLS 233
+ + +D SG TAV L+ G+ +YVAN+GDSR V+ R GK A+++S
Sbjct: 111 ELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVC-RNGK---ALEMS 166
Query: 234 IDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPG 293
D P E +R++ +G RV ++ G G
Sbjct: 167 FDHKPEDTVEYQRIEKAGGRVTLDGRVNG------------------------------G 196
Query: 294 TAFTRSIGDS--------IAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVV 345
+R+IGD AE + A P+I + + F VLA DG++ F++S+ VV
Sbjct: 197 LNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVV 256
Query: 346 DMVA-KYKDPRDACAAIVAESYRLWLQYETR-----TDDITVIVVHI 386
V + P + I E + L TR D++T I+V
Sbjct: 257 QFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQF 303
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 13/211 (6%)
Query: 862 HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML--DKSGHLQLVDFRFGKGLS 919
H + E A V L +H+ ++ + P+ +M +S L+L+DF L
Sbjct: 249 HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308
Query: 920 GNRTFTIC-GMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVA 978
++ + G A++ APE+ +GK G D W++GVL Y +L G PFG + E
Sbjct: 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 368
Query: 979 KIAKGQL--SLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAES 1036
K + S +S + D + KLL+ D NTR+ HPW + G
Sbjct: 369 KSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIH---QALEHPWLTPGNAPG---R 422
Query: 1037 TSPVPHEIMSRISQHLDSHFEDSPVFQASPP 1067
S +P ++I + + ++ P + PP
Sbjct: 423 DSQIPSSRYTKIRDSIKTKYDAWP--EPLPP 451
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
PL E ARF ++ +E LH + +++R + P L++ + GH+++ DF G+
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 924 F--TICGMADYLAPE-------IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEI 974
G ++APE I GK A D WA+GV +Y + G+ PF E +
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGK----ALDVWAMGVTLYCFVFGQCPF--MDERIM 246
Query: 975 DIVAKIAKGQLSLPQ--NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPW 1024
+ +KI L P +++ + DL+T++L + +R+ +K HPW
Sbjct: 247 CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVV---PEIKLHPW 295
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLSG 920
L E+ A ++ + LH + + + + P+ +++LDK+ H++L+DF +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171
Query: 921 NRTF-TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
F I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ +I
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
A S A D + KLLV + RL Q HPW VD
Sbjct: 232 AVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR---HPWITPVD 280
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein
Kinase And Immunoglobulin Domains
Length = 491
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 13/211 (6%)
Query: 862 HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML--DKSGHLQLVDFRFGKGLS 919
H + E A V L +H+ ++ + P+ +M +S L+L+DF L
Sbjct: 143 HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 202
Query: 920 GNRTFTIC-GMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVA 978
++ + G A++ APE+ +GK G D W++GVL Y +L G PFG + E
Sbjct: 203 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 262
Query: 979 KIAKGQL--SLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAES 1036
K + S +S + D + KLL+ D NTR+ HPW + G
Sbjct: 263 KSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIH---QALEHPWLTPGNAPG---R 316
Query: 1037 TSPVPHEIMSRISQHLDSHFEDSPVFQASPP 1067
S +P ++I + + ++ P + PP
Sbjct: 317 DSQIPSSRYTKIRDSIKTKYDAWP--EPLPP 345
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGKGLSGNRT 923
E A V + + +HK +++R + P+ ++L+ K ++++DF N
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 924 FT-ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G A Y+APE+++G + D W+ GV++Y +L G PF + ++E DI+ ++
Sbjct: 180 MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF--YGKNEYDILKRVET 236
Query: 983 GQ--LSLPQ--NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTS 1038
G+ LPQ +S +A DL+ K+L + R+ + T HPW + + S
Sbjct: 237 GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITA---TQCLEHPWIQKYSSETPTISDL 293
Query: 1039 PVPHEIMSRISQ 1050
P M+ I Q
Sbjct: 294 PSLESAMTNIRQ 305
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLAS--ILHTPLDEQSARF 872
++ E +L+KS+ + ++ D + L+ Y L I DE A
Sbjct: 92 EIYNEISLLKSLDHPNII-KLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 873 CAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL---QLVDFRFGKGLSGNRTFT-ICG 928
+++ + LHK +++R + P+ ++L+ L ++VDF S + G
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLG 210
Query: 929 MADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLP 988
A Y+APE+++ K + D W+ GV++Y +L G PFG +++ DI+ K+ KG+
Sbjct: 211 TAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGG--QNDQDIIKKVEKGKYYFD 267
Query: 989 ----QNLSPEAVDLLTKLLVVDENTR 1010
+N+S EA +L+ +L D N R
Sbjct: 268 FNDWKNISDEAKELIKLMLTYDYNKR 293
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLSG 920
L E+ A ++ + LH + + + + P+ +++LDK+ H++L+DF +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171
Query: 921 NRTF-TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
F I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ +I
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
A S A D + KLLV + RL Q HPW VD
Sbjct: 232 AVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR---HPWITPVD 280
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLSG 920
L E+ A ++ + LH + + + + P+ +++LDK+ H++L+DF +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171
Query: 921 NRTF-TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
F I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ +I
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
A S A D + KLLV + RL Q HPW VD
Sbjct: 232 AVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR---HPWITPVD 280
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGKGLSGNRT 923
E A C ++ ++ H G+++R + P+ L+L K ++L DF ++ +
Sbjct: 103 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 162
Query: 924 FT-ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
+ G YL+PE+++ + D WA GV++Y +L G PF W E + + A+I
Sbjct: 163 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF--WDEDQHRLYAQIKA 220
Query: 983 GQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
G P ++PEA L+ +L V+ R+ + V PW
Sbjct: 221 GAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV---PWI 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGKGLSGNRT 923
E A C ++ ++ H G+++R + P+ L+L K ++L DF ++ +
Sbjct: 104 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163
Query: 924 FT-ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
+ G YL+PE+++ + D WA GV++Y +L G PF W E + + A+I
Sbjct: 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF--WDEDQHRLYAQIKA 221
Query: 983 GQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
G P ++PEA L+ +L V+ R+ + V PW
Sbjct: 222 GAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV---PWI 265
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLSG 920
L E+ A ++ + LH + + + + P+ +++LDK+ H++L+DF +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171
Query: 921 NRTF-TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
F I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ +I
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
+ + S A D + KLLV + RL Q HPW VD
Sbjct: 232 SVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR---HPWITPVD 280
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGKGLSGNRT 923
E A C ++ ++ H G+++R + P+ L+L K ++L DF ++ +
Sbjct: 127 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186
Query: 924 F-TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
+ G YL+PE+++ + D WA GV++Y +L G PF W E + + A+I
Sbjct: 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF--WDEDQHRLYAQIKA 244
Query: 983 GQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
G P ++PEA L+ +L V+ R+ + V PW
Sbjct: 245 GAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV---PWI 288
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGKGLSGNRT 923
E A C ++ ++ H G+++R + P+ L+L K ++L DF ++ +
Sbjct: 104 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163
Query: 924 FT-ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
+ G YL+PE+++ + D WA GV++Y +L G PF W E + + A+I
Sbjct: 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF--WDEDQHRLYAQIKA 221
Query: 983 GQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPW 1024
G P ++PEA L+ +L V+ R+ + V PW
Sbjct: 222 GAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV---PW 264
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLSG 920
L E+ A ++ + LH + + + + P+ +++LDK+ H++L+DF +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171
Query: 921 NRTF-TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
F I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ +I
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
+ + S A D + KLLV + RL Q HPW VD
Sbjct: 232 SVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR---HPWITPVD 280
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGKGLSGN 921
E A V + + +HK +++R + P+ ++L+ K ++++DF N
Sbjct: 118 FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
Query: 922 RTFT-ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
G A Y+APE+++G + D W+ GV++Y +L G PF + ++E DI+ ++
Sbjct: 178 TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF--YGKNEYDILKRV 234
Query: 981 AKGQLS--LPQ--NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
G+ + LPQ +S +A DL+ K+L + R+ + T HPW +
Sbjct: 235 ETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITA---TQCLEHPWIQ 281
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLSG 920
L E+ A ++ + LH + + + + P+ +++LDK+ H++L+DF +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171
Query: 921 NRTF-TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
F I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ +I
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
+ + S A D + KLLV + RL Q HPW VD
Sbjct: 232 SVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR---HPWITPVD 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGKGLSGN 921
E A V + + +HK +++R + P+ ++L+ K ++++DF N
Sbjct: 118 FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
Query: 922 RTFT-ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
G A Y+APE+++G + D W+ GV++Y +L G PF + ++E DI+ ++
Sbjct: 178 TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF--YGKNEYDILKRV 234
Query: 981 AKGQLS--LPQ--NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
G+ + LPQ +S +A DL+ K+L + R+ + T HPW +
Sbjct: 235 ETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITA---TQCLEHPWIQ 281
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent Biochemical
And Cell- Based Activity Throughout The Series
Length = 317
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 833 PQILCT--CADSMHAG-----LLLNTYLACPLASILHTPLDEQSARFCAASVV----AAL 881
P I+C ++MH G +++ L S + D+ AA ++ A+
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 882 EDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIV 938
+ LH + +R V P+ L+ +K L+L DF F K + N T C Y+APE++
Sbjct: 123 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVL 182
Query: 939 QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID--IVAKIAKGQLSLPQ----NLS 992
+ + + D W+LGV++Y +L G PF S I + +I GQ P +S
Sbjct: 183 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVS 242
Query: 993 PEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
+A L+ LL D RL T HPW
Sbjct: 243 EDAKQLIRLLLKTDPTERLTI---TQFMNHPWI 272
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 113/239 (47%), Gaps = 17/239 (7%)
Query: 798 SLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPL 857
++K SK++VK + +L+E L+K + + ++ D + L+ Y L
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGEL 113
Query: 858 AS--ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDF 912
I E A V++ + +HK +++R + P+ L+L+ K +++++DF
Sbjct: 114 FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDF 173
Query: 913 RFGKGLSGNRTFT-ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRE 971
++ G A Y+APE++ G + D W+ GV++Y +L G PF
Sbjct: 174 GLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG--A 230
Query: 972 SEIDIVAKIAKGQLS--LPQ--NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
+E DI+ K+ KG+ + LPQ +S A DL+ K+L + R+ ++ H W +
Sbjct: 231 NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD---HEWIQ 286
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor
Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 833 PQILCT--CADSMHAG-----LLLNTYLACPLASILHTPLDEQSARFCAASVV----AAL 881
P I+C ++MH G +++ L S + D+ AA ++ A+
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 882 EDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIV 938
+ LH + +R V P+ L+ +K L+L DF F K + N T C Y+APE++
Sbjct: 142 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVL 201
Query: 939 QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID--IVAKIAKGQLSLPQ----NLS 992
+ + + D W+LGV++Y +L G PF S I + +I GQ P +S
Sbjct: 202 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVS 261
Query: 993 PEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
+A L+ LL D RL T HPW
Sbjct: 262 EDAKQLIRLLLKTDPTERLTI---TQFMNHPWI 291
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 14/180 (7%)
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--RT 923
+EQ A C A V+ AL LH +GV++R + D ++L G ++L DF F +S + +
Sbjct: 140 EEQIATVCEA-VLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR 198
Query: 924 FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG 983
+ G ++APE++ + D W+LG+++ M+ GE P+ S +S + + ++
Sbjct: 199 KXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS--DSPVQAMKRLRDS 256
Query: 984 ---QLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSPV 1040
+L +SP D L ++LV D R +Q + HP+ G+ E P+
Sbjct: 257 PPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQ---ELLDHPFLLQT---GLPECLVPL 310
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 113/239 (47%), Gaps = 17/239 (7%)
Query: 798 SLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPL 857
++K SK++VK + +L+E L+K + + ++ D + L+ Y L
Sbjct: 78 AVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGEL 136
Query: 858 AS--ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDF 912
I E A V++ + +HK +++R + P+ L+L+ K +++++DF
Sbjct: 137 FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDF 196
Query: 913 RFGKGLSGNRTFT-ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRE 971
++ G A Y+APE++ G + D W+ GV++Y +L G PF
Sbjct: 197 GLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG--A 253
Query: 972 SEIDIVAKIAKGQLS--LPQ--NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
+E DI+ K+ KG+ + LPQ +S A DL+ K+L + R+ ++ H W +
Sbjct: 254 NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD---HEWIQ 309
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 113/239 (47%), Gaps = 17/239 (7%)
Query: 798 SLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPL 857
++K SK++VK + +L+E L+K + + ++ D + L+ Y L
Sbjct: 79 AVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGEL 137
Query: 858 AS--ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDF 912
I E A V++ + +HK +++R + P+ L+L+ K +++++DF
Sbjct: 138 FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDF 197
Query: 913 RFGKGLSGNRTFT-ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRE 971
++ G A Y+APE++ G + D W+ GV++Y +L G PF
Sbjct: 198 GLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG--A 254
Query: 972 SEIDIVAKIAKGQLS--LPQ--NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
+E DI+ K+ KG+ + LPQ +S A DL+ K+L + R+ ++ H W +
Sbjct: 255 NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD---HEWIQ 310
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of
3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of
3brb-Pp1
Length = 298
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 113/239 (47%), Gaps = 17/239 (7%)
Query: 798 SLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPL 857
++K SK++VK + +L+E L+K + + ++ D + L+ Y L
Sbjct: 61 AVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGEL 119
Query: 858 AS--ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDF 912
I E A V++ + +HK +++R + P+ L+L+ K +++++DF
Sbjct: 120 FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDF 179
Query: 913 RFGKGLSGNRTFT-ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRE 971
++ G A Y+APE++ G + D W+ GV++Y +L G PF
Sbjct: 180 GLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG--A 236
Query: 972 SEIDIVAKIAKGQLS--LPQ--NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
+E DI+ K+ KG+ + LPQ +S A DL+ K+L + R+ ++ H W +
Sbjct: 237 NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD---HEWIQ 292
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFGKGL-SGNR 922
E+ A V+ A+ LH+ G+++R + P+ L+ D+ + + DF K G+
Sbjct: 119 EKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV 178
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T CG Y+APE++ K + A D W++GV+ Y +L G PF + E++ + +I K
Sbjct: 179 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF--YDENDSKLFEQILK 236
Query: 983 GQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPW 1024
+ ++S A D + L+ D N R + HPW
Sbjct: 237 AEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCE---QAARHPW 279
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ HT ++E+ +V+ AL LH +GV++R + D ++L G ++L DF F +S
Sbjct: 239 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298
Query: 920 GN--RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
R + G ++APE++ +G D W+LG+++ M+ GE P+ + E + +
Sbjct: 299 KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY--FNEPPLKAM 356
Query: 978 AKIAKGQLSLPQNL---SPEAVDLLTKLLVVDENTR 1010
I +NL SP L +LLV D R
Sbjct: 357 KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 392
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 166
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 167 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 218
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 219 GQVFFRQRVSXECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 261
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860
Length = 467
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 24/198 (12%)
Query: 841 DSMHAGLLLNTYLACPLAS--ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898
D + L++ Y L IL E A V++ LHK +++R + P+
Sbjct: 75 DKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPEN 134
Query: 899 LMLD---KSGHLQLVDFRFGKGLS-----GNRTFTICGMADYLAPEIVQGKGHGLAADWW 950
L+L+ + +++VDF GLS G + G A Y+APE+++ K + D W
Sbjct: 135 LLLESKSRDALIKIVDF----GLSAHFEVGGKMKERLGTAYYIAPEVLRKK-YDEKCDVW 189
Query: 951 ALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLP----QNLSPEAVDLLTKLLVVD 1006
+ GV++Y +L G PFG + E I+ ++ KG+ S +S EA L+ +L +
Sbjct: 190 SCGVILYILLCGYPPFGGQTDQE--ILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYE 247
Query: 1007 ENTRLGSQGPTSVKTHPW 1024
+ R+ ++ + HPW
Sbjct: 248 PSKRISAEEALN---HPW 262
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 110 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 169
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 170 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 221
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 222 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 264
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 170
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 171 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 222
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 223 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 265
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 213
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 265
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 266 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 308
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 171
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 223
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 224 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 266
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With Inhibitor
(2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 171
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 223
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 224 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 266
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 880 ALEDLHKRGVLYRGVSPDVLMLD--KSGHLQLVDFRFGKGLSGNRTFTIC-GMADYLAPE 936
L+ +H+ +++ + P+ +M + K+ ++++DF L+ + + A++ APE
Sbjct: 161 GLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPE 220
Query: 937 IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQN----LS 992
IV + G D WA+GVL Y +L G PF E +++ + + + ++ +S
Sbjct: 221 IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG--EDDLETLQNVKRCDWEFDEDAFSSVS 278
Query: 993 PEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSRISQHL 1052
PEA D + LL + RL HPW + + TS +P ++I Q +
Sbjct: 279 PEAKDFIKNLLQKEPRKRLTVHDALE---HPWLKG----DHSNLTSRIPSSRYNKIRQKI 331
Query: 1053 DSHFEDSPVFQAS 1065
+ D P Q +
Sbjct: 332 KEKYADWPAPQPA 344
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With (3e)-3-[(4-
Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 170
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 171 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 222
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 223 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 265
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 171
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 223
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 224 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 266
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 185
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 186 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 237
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 238 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 280
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 166
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 167 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 218
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 219 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 261
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 198
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 250
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 251 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 293
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 186
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 238
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 239 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 281
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 185
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 186 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 237
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 238 GQVFFRQRVSXECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 280
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 213
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 265
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 266 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 308
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG--HLQLVDFRFGKG-LSGN 921
E ARF +++ + H + +R + + +LD S L++ DF + K + +
Sbjct: 113 FSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172
Query: 922 RTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESE--IDIVA 978
+ + G Y+APE++ + + G AD W+ GV +Y ML G PF E +
Sbjct: 173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQ 232
Query: 979 KIAKGQLSLPQN--LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
+I + S+P + +SPE L++++ V D TR+ +KTH WF
Sbjct: 233 RILSVKYSIPDDIRISPECCHLISRIFVADPATRISI---PEIKTHSWF 278
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor Whi-P180
Length = 484
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 17/239 (7%)
Query: 798 SLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPL 857
++K SK++VK + +L+E L+K + + ++ D + L+ Y L
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIXKLYEFFEDKGYFYLVGEVYTGGEL 113
Query: 858 AS--ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDF 912
I E A V++ + HK +++R + P+ L+L+ K +++++DF
Sbjct: 114 FDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDF 173
Query: 913 RFGKGLSGNRTFT-ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRE 971
++ G A Y+APE++ G + D W+ GV++Y +L G PF
Sbjct: 174 GLSTHFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG--A 230
Query: 972 SEIDIVAKIAKGQLS--LPQ--NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
+E DI+ K+ KG+ + LPQ +S A DL+ K L + R+ ++ H W +
Sbjct: 231 NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALD---HEWIQ 286
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex
With A Consensus Peptide
Length = 301
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 10/171 (5%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ HT ++E+ +V+ AL LH +GV++R + D ++L G ++L DF F +S
Sbjct: 117 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 176
Query: 920 GN--RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
R + G ++APE++ +G D W+LG+++ M+ GE P+ + E + +
Sbjct: 177 KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY--FNEPPLKAM 234
Query: 978 AKIAKGQLSLPQNL---SPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
I +NL SP L +LLV D R + + HP+
Sbjct: 235 KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA---AELLKHPFL 282
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ T +DE + ALE LH V++R + D ++L G ++L DF F ++
Sbjct: 109 VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQIT 168
Query: 920 --GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRE-SEIDI 976
++ T+ G ++APE+V K +G D W+LG++ M++GE P+ + + +
Sbjct: 169 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 977 VAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
+A +L P+ LS D L + L +D R
Sbjct: 229 IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 10/149 (6%)
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNR 922
PL E +R VVAA++ H RGV++R + + +++D + G +L+DF G L
Sbjct: 135 PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP 194
Query: 923 TFTICGMADYLAPE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA 981
G Y PE I + + H L A W+LG+L+Y M+ G++PF R+ E I
Sbjct: 195 YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE--RDQE------IL 246
Query: 982 KGQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
+ +L P ++SP+ L+ + L ++R
Sbjct: 247 EAELHFPAHVSPDCCALIRRCLAPKPSSR 275
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 10/171 (5%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ HT ++E+ +V+ AL LH +GV++R + D ++L G ++L DF F +S
Sbjct: 119 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 178
Query: 920 GN--RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
R + G ++APE++ +G D W+LG+++ M+ GE P+ + E + +
Sbjct: 179 KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY--FNEPPLKAM 236
Query: 978 AKIAKGQLSLPQNL---SPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
I +NL SP L +LLV D R + + HP+
Sbjct: 237 KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA---AELLKHPFL 284
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 146 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 205
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 206 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 257
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 258 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 300
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 186
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 238
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 239 GQVFFRQRVSXECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 281
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ HT ++E+ +V+ AL LH +GV++R + D ++L G ++L DF F +S
Sbjct: 162 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 221
Query: 920 GN--RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
R + G ++APE++ +G D W+LG+++ M+ GE P+ + E + +
Sbjct: 222 KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY--FNEPPLKAM 279
Query: 978 AKIAKGQLSLPQNL---SPEAVDLLTKLLVVDENTR 1010
I +NL SP L +LLV D R
Sbjct: 280 KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 315
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 22/177 (12%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGK 916
IL E A V++ LHK +++R + P+ L+L+ + +++VDF
Sbjct: 113 ILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDF---- 168
Query: 917 GLS-----GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRE 971
GLS G + G A Y+APE+++ K + D W+ GV++Y +L G PFG +
Sbjct: 169 GLSAHFEVGGKMKERLGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGG--Q 225
Query: 972 SEIDIVAKIAKGQLSLP----QNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPW 1024
++ +I+ ++ KG+ S +S EA L+ +L + + R+ ++ + HPW
Sbjct: 226 TDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALN---HPW 279
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At 2.6
Ang Resolution
Length = 328
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 213
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 265
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 266 GQVFFRQRVSXECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 308
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 134 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 193
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 194 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 245
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 246 GQVFFRQRVSXECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 288
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole Inhibitor
Vx3
Length = 333
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 159 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 218
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 219 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 270
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 271 GQVFFRQRVSXECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 313
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ HT ++E+ +V+ AL LH +GV++R + D ++L G ++L DF F +S
Sbjct: 112 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 171
Query: 920 GN--RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
R + G ++APE++ +G D W+LG+++ M+ GE P+ + E + +
Sbjct: 172 KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY--FNEPPLKAM 229
Query: 978 AKIAKGQLSLPQNL---SPEAVDLLTKLLVVDENTR 1010
I +NL SP L +LLV D R
Sbjct: 230 KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 265
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ HT ++E+ +V+ AL LH +GV++R + D ++L G ++L DF F +S
Sbjct: 108 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 167
Query: 920 GN--RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
R + G ++APE++ +G D W+LG+++ M+ GE P+ + E + +
Sbjct: 168 KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY--FNEPPLKAM 225
Query: 978 AKIAKGQLSLPQNL---SPEAVDLLTKLLVVDENTR 1010
I +NL SP L +LLV D R
Sbjct: 226 KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 261
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLS- 919
L E+ A ++ + LH + + + P+ +++LD++ ++++DF +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ ++
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
A + + N S A D + +LLV D R+ Q HPW + D
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ---HPWIKPKD 279
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 11/193 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLS- 919
L E+ A ++ + LH + + + P+ +++LD++ ++++DF +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ ++
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD-WKGIAES 1036
A + + N S A D + +LLV D R+ Q HPW + D + ++
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ---HPWIKPKDTQQALSRK 287
Query: 1037 TSPVPHEIMSRIS 1049
S V E + +
Sbjct: 288 ASAVNMEKFKKFA 300
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 186
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E D +I +
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------EHD--EEIIR 238
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + R PT ++ HPW +DV
Sbjct: 239 GQVFFRQRVSXECQHLIRWCLALRPXDR-----PTFEEIQNHPWMQDV 281
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
Length = 295
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 817 LKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHT---PL--DEQSAR 871
LK KN++ Q L + +++ + + L+++L + PL +EQ+
Sbjct: 76 LKHKNIV----------QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG 125
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKSGHLQLVDFRFGKGLSGNR--TFTICG 928
F ++ L+ LH +++R + D VL+ SG L++ DF K L+G T T G
Sbjct: 126 FYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG 185
Query: 929 MADYLAPEIVQG--KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV-AKIAKGQL 985
Y+APEI+ +G+G AAD W+LG I M G+ PF E + + + K
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 245
Query: 986 SLPQNLSPEAVDLLTKLLVVDENTR 1010
+P+++S EA + K D + R
Sbjct: 246 EIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound
Inhibitor Fragment
Length = 293
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLS- 919
L E+ A ++ + LH + + + P+ +++LD++ ++++DF +
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 169
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ ++
Sbjct: 170 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 229
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
A + + N S A D + +LLV D R+ Q HPW + D
Sbjct: 230 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ---HPWIKPKD 278
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ T +DE + ALE LH V++R + D ++L G ++L DF F ++
Sbjct: 108 VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167
Query: 920 GNRT--FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRE-SEIDI 976
++ T+ G ++APE+V K +G D W+LG++ M++GE P+ + + +
Sbjct: 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 977 VAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
+A +L P+ LS D L + L +D R
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death
Associated Protein Kinase Catalytic Domain With Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death
Associated Protein Kinase Catalytic Domain
Length = 295
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLS- 919
L E+ A ++ + LH + + + P+ +++LD++ ++++DF +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ ++
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
A + + N S A D + +LLV D R+ Q HPW + D
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ---HPWIKPKD 279
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic Domain
Of Death-Associated Protein Kinase With Atp Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLS- 919
L E+ A ++ + LH + + + P+ +++LD++ ++++DF +
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 169
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ ++
Sbjct: 170 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 229
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
A + + N S A D + +LLV D R+ Q HPW + D
Sbjct: 230 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ---HPWIKPKD 278
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
Length = 285
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLS- 919
L E+ A ++ + LH + + + P+ +++LD++ ++++DF +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ ++
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
A + + N S A D + +LLV D R+ Q HPW + D
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ---HPWIKPKD 279
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E + +I+
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIG---- 251
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 252 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 294
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In
Complex With Amppnp And Mg2+
Length = 295
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLS- 919
L E+ A ++ + LH + + + P+ +++LD++ ++++DF +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ ++
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
A + + N S A D + +LLV D R+ Q HPW + D
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ---HPWIKPKD 279
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLS- 919
L E+ A ++ + LH + + + P+ +++LD++ ++++DF +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ ++
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
A + + N S A D + +LLV D R+ Q HPW + D
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ---HPWIKPKD 279
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E + +I+
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIG---- 251
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 252 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 294
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531
Length = 312
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 198
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E + +I+
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIG---- 250
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 251 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 293
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus
Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With Fluorinated
Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 198
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E + +I+
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIG---- 250
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 251 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 293
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 166
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E + +I+
Sbjct: 167 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIG---- 218
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 219 GQVFFRQRVSSECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 261
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E + +I+
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIG---- 251
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 252 GQVFFRQRVSXECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 294
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 198
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E + +I+
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIG---- 250
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 251 GQVFFRQRVSXECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 293
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And The
Jnk Inhibitor V
Length = 314
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGNRT 923
L E+ AR V+ A+ H GVL+R + + +++D G L+L+DF G L
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 924 FTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
G Y PE ++ + HG +A W+LG+L+Y M+ G++PF E + +I+
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIG---- 251
Query: 983 GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDV 1028
GQ+ Q +S E L+ L + + R PT ++ HPW +DV
Sbjct: 252 GQVFFRQRVSXECQHLIRWCLALRPSDR-----PTFEEIQNHPWMQDV 294
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLS- 919
L E+ A ++ + LH + + + P+ +++LD++ ++++DF +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ ++
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
A + + N S A D + +LLV D R+ Q HPW + D
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ---HPWIKPKD 279
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLS- 919
L E+ A ++ + LH + + + P+ +++LD++ ++++DF +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ ++
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
A + + N S A D + +LLV D R+ Q HPW + D
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ---HPWIKPKD 279
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLS- 919
L E+ A ++ + LH + + + P+ +++LD++ ++++DF +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ ++
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
A + + N S A D + +LLV D R+ Q HPW + D
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ---HPWIKPKD 279
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 22/206 (10%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM---LDKSGHLQLVDFRFGKGLS-GNR 922
E+ A V+ A++ LH G+++R + P+ L+ LD+ + + DF K G+
Sbjct: 115 ERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T CG Y+APE++ K + A D W++GV+ Y +L G PF + E++ + +I K
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF--YDENDAKLFEQILK 232
Query: 983 GQLSLP----QNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTS 1038
+ ++S A D + L+ D R + HPW IA T+
Sbjct: 233 AEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ---HPW--------IAGDTA 281
Query: 1039 PVPHEIMSRISQHLDSHFEDSPVFQA 1064
+ I +S+ + +F S QA
Sbjct: 282 -LDKNIHQSVSEQIKKNFAKSKWKQA 306
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 22/206 (10%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM---LDKSGHLQLVDFRFGKGLS-GNR 922
E+ A V+ A++ LH G+++R + P+ L+ LD+ + + DF K G+
Sbjct: 115 ERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T CG Y+APE++ K + A D W++GV+ Y +L G PF + E++ + +I K
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF--YDENDAKLFEQILK 232
Query: 983 GQLSLP----QNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTS 1038
+ ++S A D + L+ D R + HPW IA T+
Sbjct: 233 AEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE---QALQHPW--------IAGDTA 281
Query: 1039 PVPHEIMSRISQHLDSHFEDSPVFQA 1064
+ I +S+ + +F S QA
Sbjct: 282 -LDKNIHQSVSEQIKKNFAKSKWKQA 306
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 817 LKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHT---PL--DEQSAR 871
LK KN++ Q L + +++ + + L+++L + PL +EQ+
Sbjct: 62 LKHKNIV----------QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG 111
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKSGHLQLVDFRFGKGLSGNR--TFTICG 928
F ++ L+ LH +++R + D VL+ SG L++ DF K L+G T T G
Sbjct: 112 FYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG 171
Query: 929 MADYLAPEIVQG--KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV-AKIAKGQL 985
Y+APEI+ +G+G AAD W+LG I M G+ PF E + + + K
Sbjct: 172 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 231
Query: 986 SLPQNLSPEAVDLLTKLLVVDENTR 1010
+P+++S EA + K D + R
Sbjct: 232 EIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
Length = 278
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLS- 919
L E+ A ++ + LH + + + P+ +++LD++ ++++DF +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ ++
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
A + + N S A D + +LLV D R+ Q HPW +
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ---HPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLS- 919
L E+ A ++ + LH + + + P+ +++LD++ ++++DF +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ ++
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
A + + N S A D + +LLV D R+ Q HPW +
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ---HPWIK 276
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 22/206 (10%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM---LDKSGHLQLVDFRFGKGLS-GNR 922
E+ A V+ A++ LH G+++R + P+ L+ LD+ + + DF K G+
Sbjct: 115 ERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T CG Y+APE++ K + A D W++GV+ Y +L G PF + E++ + +I K
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF--YDENDAKLFEQILK 232
Query: 983 GQLSLP----QNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTS 1038
+ ++S A D + L+ D R + HPW IA T+
Sbjct: 233 AEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE---QALQHPW--------IAGDTA 281
Query: 1039 PVPHEIMSRISQHLDSHFEDSPVFQA 1064
+ I +S+ + +F S QA
Sbjct: 282 -LDKNIHQSVSEQIKKNFAKSKWKQA 306
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ HT ++E+ SV+ AL LH +GV++R + D ++L G ++L DF F +S
Sbjct: 133 VTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS 192
Query: 920 GN--RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ + G ++APE++ +G D W+LG+++ M+ GE P+
Sbjct: 193 KEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGLS- 919
L E+ A ++ + LH + + + P+ +++LD++ ++++DF +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G ++APEIV + GL AD W++GV+ Y +L G PF + +E+ ++
Sbjct: 171 GNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
A + + N S A D + +LLV D R+ Q HPW + D
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ---HPWIKPKD 279
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM---LDKSGHLQLVDFRFGKGLS-GNR 922
E+ A V+ A++ LH G+++R + P+ L+ LD+ + + DF K G+
Sbjct: 115 ERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T CG Y+APE++ K + A D W++GV+ Y +L G PF + E++ + +I K
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF--YDENDAKLFEQILK 232
Query: 983 GQLSLP----QNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPW 1024
+ ++S A D + L+ D R + HPW
Sbjct: 233 AEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE---QALQHPW 275
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 21/241 (8%)
Query: 813 EVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHT------PLD 866
E V KE L++ + + + + ++ Y C + +L + P+
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVC 109
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTI 926
+ FC ++ LE LH +G++++ + P L+L G L++ + L
Sbjct: 110 QAHGYFC--QLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDT 167
Query: 927 C----GMADYLAPEIVQG--KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
C G + PEI G G D W+ GV +Y + G PF ++ + I
Sbjct: 168 CRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG--DNIYKLFENI 225
Query: 981 AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSPV 1040
KG ++P + P DLL +L + R + ++ H WFR AE+ P+
Sbjct: 226 GKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIR---QIRQHSWFRKKHPP--AEAPVPI 280
Query: 1041 P 1041
P
Sbjct: 281 P 281
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQLVDFRFGKGLSGNRT 923
E+ A S+ A++ LH + +R V P+ L+ + L+L DF F K + + +
Sbjct: 160 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 219
Query: 924 FTI-CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID--IVAKI 980
T C Y+APE++ + + + D W+LGV++Y +L G PF S I + +I
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 279
Query: 981 AKGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
GQ P +S E L+ LL + R+ T HPW
Sbjct: 280 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI---TEFMNHPWI 325
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQLVDFRFGKGLSGNRT 923
E+ A ++ A+ LH+ G+++R + P+ L+ L++ DF K +
Sbjct: 147 ERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL 206
Query: 924 F-TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T+CG Y APEI++G +G D W++G++ Y +L G PF R + + +I
Sbjct: 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF-MFRRILN 265
Query: 983 GQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPW 1024
+ +S A DL+ KL+V+D RL + HPW
Sbjct: 266 CEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTT---FQALQHPW 308
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQLVDFRFGKGLSGNRT 923
E+ A S+ A++ LH + +R V P+ L+ + L+L DF F K + + +
Sbjct: 116 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 175
Query: 924 FTI-CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID--IVAKI 980
T C Y+APE++ + + + D W+LGV++Y +L G PF S I + +I
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 235
Query: 981 AKGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
GQ P +S E L+ LL + R+ T HPW
Sbjct: 236 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI---TEFMNHPWI 281
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ T +DE + ALE LH V++R + D ++L G ++L DF F ++
Sbjct: 108 VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167
Query: 920 GNRT--FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRE-SEIDI 976
++ + G ++APE+V K +G D W+LG++ M++GE P+ + + +
Sbjct: 168 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 977 VAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
+A +L P+ LS D L + L +D R
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 261
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQLVDFRFGKGLSGNRT 923
E+ A S+ A++ LH + +R V P+ L+ + L+L DF F K + + +
Sbjct: 116 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 175
Query: 924 FTI-CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID--IVAKI 980
T C Y+APE++ + + + D W+LGV++Y +L G PF S I + +I
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 235
Query: 981 AKGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
GQ P +S E L+ LL + R+ T HPW
Sbjct: 236 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI---TEFMNHPWI 281
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
Length = 324
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQLVDFRFGKGLSGNRT 923
E+ A S+ A++ LH + +R V P+ L+ + L+L DF F K + + +
Sbjct: 120 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 179
Query: 924 FTI-CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID--IVAKI 980
T C Y+APE++ + + + D W+LGV++Y +L G PF S I + +I
Sbjct: 180 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 239
Query: 981 AKGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
GQ P +S E L+ LL + R+ T HPW
Sbjct: 240 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI---TEFMNHPWI 285
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQLVDFRFGKGLSGNRT 923
E+ A S+ A++ LH + +R V P+ L+ + L+L DF F K + + +
Sbjct: 114 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 173
Query: 924 FTI-CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID--IVAKI 980
T C Y+APE++ + + + D W+LGV++Y +L G PF S I + +I
Sbjct: 174 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 233
Query: 981 AKGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
GQ P +S E L+ LL + R+ T HPW
Sbjct: 234 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI---TEFMNHPWI 279
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQLVDFRFGKGLSGNRT 923
E+ A S+ A++ LH + +R V P+ L+ + L+L DF F K + + +
Sbjct: 115 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 174
Query: 924 FTI-CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID--IVAKI 980
T C Y+APE++ + + + D W+LGV++Y +L G PF S I + +I
Sbjct: 175 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 234
Query: 981 AKGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
GQ P +S E L+ LL + R+ T HPW
Sbjct: 235 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI---TEFMNHPWI 280
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG--HLQLVDFRFGKG-LSGN 921
E ARF +++ + H V +R + + +LD S L++ DF + K + +
Sbjct: 112 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 171
Query: 922 RTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESE--IDIVA 978
+ + G Y+APE++ K + G AD W+ GV +Y ML G PF E + +
Sbjct: 172 QPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 231
Query: 979 KIAKGQLSLPQ--NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
+I Q ++P ++SPE L++++ V D R+ ++ H WF
Sbjct: 232 RILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI---PEIRNHEWF 277
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ T +DE + ALE LH V++R + D ++L G ++L DF F ++
Sbjct: 109 VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 168
Query: 920 GNRT--FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRE-SEIDI 976
++ + G ++APE+V K +G D W+LG++ M++GE P+ + + +
Sbjct: 169 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 977 VAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
+A +L P+ LS D L + L +D R
Sbjct: 229 IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG--HLQLVDFRFGKG-LSGN 921
E ARF +++ + H V +R + + +LD S L++ DF + K + +
Sbjct: 112 FSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHS 171
Query: 922 RTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESE--IDIVA 978
+ + G Y+APE++ K + G AD W+ GV +Y ML G PF E + +
Sbjct: 172 QPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 231
Query: 979 KIAKGQLSLPQ--NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
+I Q ++P ++SPE L++++ V D R+ ++ H WF
Sbjct: 232 RILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI---PEIRNHEWF 277
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQLVDFRFGKGLSGNRT 923
E+ A S+ A++ LH + +R V P+ L+ + L+L DF F K + + +
Sbjct: 121 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 180
Query: 924 FTI-CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID--IVAKI 980
T C Y+APE++ + + + D W+LGV++Y +L G PF S I + +I
Sbjct: 181 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 240
Query: 981 AKGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
GQ P +S E L+ LL + R+ T HPW
Sbjct: 241 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI---TEFMNHPWI 286
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQLVDFRFGKGLSGNRT 923
E+ A S+ A++ LH + +R V P+ L+ + L+L DF F K + + +
Sbjct: 122 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 181
Query: 924 FTI-CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID--IVAKI 980
T C Y+APE++ + + + D W+LGV++Y +L G PF S I + +I
Sbjct: 182 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 241
Query: 981 AKGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
GQ P +S E L+ LL + R+ T HPW
Sbjct: 242 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI---TEFMNHPWI 287
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG--HLQLVDFRFGKG-LSGN 921
E ARF +++ + H V +R + + +LD S L++ DF + K + +
Sbjct: 111 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 170
Query: 922 RTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESE--IDIVA 978
+ + G Y+APE++ K + G AD W+ GV +Y ML G PF E + +
Sbjct: 171 QPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 230
Query: 979 KIAKGQLSLPQ--NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
+I Q ++P ++SPE L++++ V D R+ ++ H WF
Sbjct: 231 RILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI---PEIRNHEWF 276
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQLVDFRFGKGLSGNRT 923
E+ A S+ A++ LH + +R V P+ L+ + L+L DF F K + + +
Sbjct: 166 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 225
Query: 924 FTI-CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID--IVAKI 980
T C Y+APE++ + + + D W+LGV++Y +L G PF S I + +I
Sbjct: 226 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 285
Query: 981 AKGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
GQ P +S E L+ LL + R+ T HPW
Sbjct: 286 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI---TEFMNHPWI 331
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
+ T +DE + ALE LH V++R + D ++L G ++L DF F ++
Sbjct: 108 VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167
Query: 920 GNRT--FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRE-SEIDI 976
++ + G ++APE+V K +G D W+LG++ M++GE P+ + + +
Sbjct: 168 PEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 977 VAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTR 1010
+A +L P+ LS D L + L +D R
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQLVDFRFGKGLSGNRT 923
E+ A S+ A++ LH + +R V P+ L+ + L+L DF F K + + +
Sbjct: 130 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 189
Query: 924 FTI-CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID--IVAKI 980
T C Y+APE++ + + + D W+LGV++Y +L G PF S I + +I
Sbjct: 190 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 249
Query: 981 AKGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
GQ P +S E L+ LL + R+ T HPW
Sbjct: 250 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI---TEFMNHPWI 295
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQLVDFRFGKGLSGNRT 923
E+ A S+ A++ LH + +R V P+ L+ + L+L DF F K + + +
Sbjct: 114 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 173
Query: 924 FT-ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID--IVAKI 980
T C Y+APE++ + + + D W+LGV++Y +L G PF S I + +I
Sbjct: 174 LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 233
Query: 981 AKGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
GQ P +S E L+ LL + R+ T HPW
Sbjct: 234 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI---TEFMNHPWI 279
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 789 LLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848
L RD +L +R Q L ++ + ++ +P+ +P I+ D +
Sbjct: 49 LARDPSFYLRFRR-EAQNAAALNHPA-IVAVYDTGEAETPAGPLPYIVMEYVDGVT---- 102
Query: 849 LNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
L I+HT P+ + A A AL H+ G+++R V P +M+ +
Sbjct: 103 --------LRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA 154
Query: 907 LQLVDFRFGKGL--SGN---RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ 961
++++DF + + SGN +T + G A YL+PE +G +D ++LG ++Y +L
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 962 GEMPF 966
GE PF
Sbjct: 215 GEPPF 219
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 789 LLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848
L RD +L +R Q L ++ + ++ +P+ +P I+ D +
Sbjct: 49 LARDPSFYLRFRR-EAQNAAALNHPA-IVAVYDTGEAETPAGPLPYIVMEYVDGVT---- 102
Query: 849 LNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
L I+HT P+ + A A AL H+ G+++R V P +M+ +
Sbjct: 103 --------LRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA 154
Query: 907 LQLVDFRFGKGL--SGN---RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ 961
++++DF + + SGN +T + G A YL+PE +G +D ++LG ++Y +L
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 962 GEMPF 966
GE PF
Sbjct: 215 GEPPF 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 789 LLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848
L RD +L +R Q L ++ + ++ +P+ +P I+ D +
Sbjct: 49 LARDPSFYLRFRR-EAQNAAALNHPA-IVAVYDTGEAETPAGPLPYIVMEYVDGVT---- 102
Query: 849 LNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
L I+HT P+ + A A AL H+ G+++R V P +M+ +
Sbjct: 103 --------LRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA 154
Query: 907 LQLVDFRFGKGL--SGN---RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ 961
++++DF + + SGN +T + G A YL+PE +G +D ++LG ++Y +L
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 962 GEMPF 966
GE PF
Sbjct: 215 GEPPF 219
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPD-VLMLDKSGH--LQLVDFRFGKGL-SGNRTFTICGMADY 932
++ AL H + V+++ + P+ +L D S H ++++DF + S + G A Y
Sbjct: 133 MMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALY 192
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLP-QNL 991
+APE+ + + D W+ GV++YF+L G +PF E+ A + ++ + L
Sbjct: 193 MAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPL 251
Query: 992 SPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
+P+AVDLL ++L D R + V H WF+
Sbjct: 252 TPQAVDLLKQMLTKDPERRPSA---AQVLHHEWFK 283
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 789 LLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848
L RD +L +R Q L ++ + ++ +P+ +P I+ D +
Sbjct: 49 LARDPSFYLRFRR-EAQNAAALNHPA-IVAVYDTGEAETPAGPLPYIVMEYVDGVT---- 102
Query: 849 LNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
L I+HT P+ + A A AL H+ G+++R V P +++ +
Sbjct: 103 --------LRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNA 154
Query: 907 LQLVDFRFGKGL--SGN---RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ 961
+++VDF + + SGN +T + G A YL+PE +G +D ++LG ++Y +L
Sbjct: 155 VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 962 GEMPF 966
GE PF
Sbjct: 215 GEPPF 219
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFGKGLS-GNR 922
E A V++A+ HK V +R + P+ + L+L+DF G
Sbjct: 105 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T G Y++P++++G +G D W+ GV++Y +L G PF + ++ +++ KI +
Sbjct: 165 MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSA--PTDXEVMLKIRE 221
Query: 983 GQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
G + P+ N+SP+A L+ +LL R+ S H WF
Sbjct: 222 GTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITS---LQALEHEWF 265
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
Length = 400
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 13/169 (7%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQLVDFRFGKGLSGNRT 923
E+ A S+ A++ LH + +R V P+ L+ + L+L DF F K + + +
Sbjct: 160 EREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 219
Query: 924 FTI-CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID--IVAKI 980
T C Y+APE++ + + + D W+LGV+ Y +L G PF S I +I
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRI 279
Query: 981 AKGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
GQ P +S E L+ LL + R T HPW
Sbjct: 280 RXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTI---TEFXNHPWI 325
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFGKGLS-GNR 922
E A V++A+ HK V +R + P+ + L+L+DF G
Sbjct: 122 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 181
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
T G Y++P++++G +G D W+ GV++Y +L G PF + ++ +++ KI +
Sbjct: 182 MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSA--PTDXEVMLKIRE 238
Query: 983 GQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
G + P+ N+SP+A L+ +LL R+ S H WF
Sbjct: 239 GTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITS---LQALEHEWF 282
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
+E K L+ + + + LL K+LV + + R+ +K W+
Sbjct: 221 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARITI---PDIKKDRWYNKPL 268
Query: 1030 WKGIAES--TSPVPHEIMSRISQHLDSHFEDSPVFQAS 1065
KG TS E S S+H+ S+ + SPV AS
Sbjct: 269 KKGAKRPRVTSGGVSESPSGFSKHIQSNLDFSPVNSAS 306
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 789 LLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848
L RD +L +R Q L ++ + ++ +P+ +P I+ D +
Sbjct: 66 LARDPSFYLRFRR-EAQNAAALNHPA-IVAVYDTGEAETPAGPLPYIVMEYVDGV----- 118
Query: 849 LNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
L I+HT P+ + A A AL H+ G+++R V P +M+ +
Sbjct: 119 -------TLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA 171
Query: 907 LQLVDFRFGKGL--SGN---RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ 961
++++DF + + SGN +T + G A YL+PE +G +D ++LG ++Y +L
Sbjct: 172 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 231
Query: 962 GEMPF 966
GE PF
Sbjct: 232 GEPPF 236
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 22/172 (12%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLML--DKSGHLQLVDFRFGK---GLSGNRTF---TICG 928
+ +AL LH +G+ +R + P+ + +KS ++LVDF K L+ + T G
Sbjct: 177 IFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAG 236
Query: 929 MADYLAPEIVQ--GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLS 986
++APE++ + +G D W+ GVL++ +L G +PF ++ D ++++ +L
Sbjct: 237 TPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA--DTISQVLNKKLC 294
Query: 987 LPQN----LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPW---FRDVDWK 1031
LSP A DLL+ LL + + R + HPW F D +K
Sbjct: 295 FENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ---HPWISQFSDKIYK 343
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
+E K L+ + + + LL K+LV + + R+ +K W+
Sbjct: 222 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARITI---PDIKKDRWYNKPL 269
Query: 1030 WKGIAES--TSPVPHEIMSRISQHLDSHFEDSPVFQAS 1065
KG TS E S S+H+ S+ + SPV AS
Sbjct: 270 KKGAKRPRVTSGGVSESPSGFSKHIQSNLDFSPVNSAS 307
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 859 SILHTPLDEQSARFCAASVVAALEDLHKR-GVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
S+L + E+ + V AL L + +++R + P ++LD+SG+++L DF G
Sbjct: 116 SVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDF----G 171
Query: 918 LSGNRTFTICGMAD-----YLAPEIVQG----KGHGLAADWWALGVLIYFMLQGEMPFGS 968
+SG +I D Y+APE + +G+ + +D W+LG+ +Y + G P+
Sbjct: 172 ISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK 231
Query: 969 WRESEIDIVAKIAKG---QLSLPQ--NLSPEAVDLLTKLLVVDENTR 1010
W S D + ++ KG QLS + SP ++ + L DE+ R
Sbjct: 232 W-NSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKR 277
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGL-S 919
L E A ++ + LH + + + + P+ +++LDK+ ++L+DF + +
Sbjct: 112 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 171
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ +I
Sbjct: 172 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 231
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
A N S A D + +LLV D R+
Sbjct: 232 AVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 265
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 789 LLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848
L RD +L +R Q L ++ ++ +P+ +P I+ D +
Sbjct: 49 LARDPSFYLRFRR-EAQNAAALNHPA-IVAVYATGEAETPAGPLPYIVMEYVDGVT---- 102
Query: 849 LNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
L I+HT P+ + A A AL H+ G+++R V P +M+ +
Sbjct: 103 --------LRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA 154
Query: 907 LQLVDFRFGKGL--SGN---RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ 961
++++DF + + SGN +T + G A YL+PE +G +D ++LG ++Y +L
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 962 GEMPF 966
GE PF
Sbjct: 215 GEPPF 219
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGL-S 919
L E A ++ + LH + + + + P+ +++LDK+ ++L+DF + +
Sbjct: 105 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 164
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ +I
Sbjct: 165 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 224
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
A N S A D + +LLV D R+
Sbjct: 225 AVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 258
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD--KSGHLQLVDFRFGKGLSGNR 922
L+E+ V AL+ LH + + + P+ ++ +S +++++F + L
Sbjct: 99 LNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158
Query: 923 TFTICGMA-DYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA 981
F + A +Y APE+ Q A D W+LG L+Y +L G PF + E+ I+ I
Sbjct: 159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA--ETNQQIIENIM 216
Query: 982 KGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
+ + + +S EA+D + +LLV + +R+ + + HPW +
Sbjct: 217 NAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTA---SEALQHPWLK 262
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLDKS---GHLQLVDFRFGKGL-S 919
L E A ++ + LH + + + + P+ +++LDK+ ++L+DF + +
Sbjct: 126 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 185
Query: 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIV 977
GN I G +++APEIV + GL AD W++GV+ Y +L G PF + +E+ +I
Sbjct: 186 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 245
Query: 978 AKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
A N S A D + +LLV D R+
Sbjct: 246 AVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 279
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG---N 921
E ARF +++ + H V +R + + +LD S +L FG S +
Sbjct: 112 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHS 171
Query: 922 RTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESE--IDIVA 978
+ + G Y+APE++ K + G AD W+ GV +Y ML G PF E + +
Sbjct: 172 QPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 231
Query: 979 KIAKGQLSLPQ--NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
+I Q ++P ++SPE L++++ V D R+ ++ H WF
Sbjct: 232 RILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI---PEIRNHEWF 277
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 180 NSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLA-ERRGKEIVAVDLSIDQTP 238
NS L+ VL + SG TA V G ++VAN+GDSRA+L + AV LS D
Sbjct: 186 NSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNA 245
Query: 239 FREDELERVKLSGAR-----VLTLDQIEGLKNP-------------DVQCWGTEEGDDGD 280
E EL+R+KL + V+ D++ GL P D+Q E G D
Sbjct: 246 QNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPD-- 303
Query: 281 PPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLS 340
+T+ I + + A PE+ L F VLA+DG++E +
Sbjct: 304 ---------QLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMH 354
Query: 341 SQAVVDMVAKYKDPRDACAAIVAESYRLWL 370
Q VV +V +Y I Y++ L
Sbjct: 355 RQDVVRIVGEYLTGMHHQQPIAVGGYKVTL 384
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFG--KGLSGNRTFTICGMAD 931
++ AL H +++R V P+ ++L + S ++L DF G SG G
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPH 198
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSL-PQ- 989
++APE+V+ + +G D W GV+++ +L G +PF +E + I KG+ + P+
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER---LFEGIIKGKYKMNPRQ 255
Query: 990 --NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
++S A DL+ ++L++D R+ HPW ++ D
Sbjct: 256 WSHISESAKDLVRRMLMLDPAERITVY---EALNHPWLKERD 294
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 180 NSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLA-ERRGKEIVAVDLSIDQTP 238
NS L+ VL + SG TA V G ++VAN+GDSRA+L + AV LS D
Sbjct: 186 NSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNA 245
Query: 239 FREDELERVKLSGAR-----VLTLDQIEGLKNP-------------DVQCWGTEEGDDGD 280
E E+ER+KL + V+ D++ GL P D+Q E G D
Sbjct: 246 QNEREVERLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPD-- 303
Query: 281 PPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLS 340
+T+ I + + A PE+ L F VLA+DG++E +
Sbjct: 304 ---------QLNDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMH 354
Query: 341 SQAVVDMVAKYKDPRDACAAIVAESYRLWL 370
Q VV +V +Y I Y++ L
Sbjct: 355 RQDVVRIVGEYLTGMHHQQPIAVGGYKVTL 384
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With
Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With
Gold
Length = 362
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 11/169 (6%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG---N 921
E ARF +++ + H V +R + + +LD S +L FG S +
Sbjct: 112 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHS 171
Query: 922 RTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESE--IDIVA 978
+ G Y+APE++ K + G AD W+ GV +Y ML G PF E + +
Sbjct: 172 QPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 231
Query: 979 KIAKGQLSLPQ--NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
+I Q ++P ++SPE L++++ V D R+ ++ H WF
Sbjct: 232 RILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI---PEIRNHEWF 277
>pdb|3OCP|A Chain A, Crystal Structure Of Camp Bound Cgmp-Dependent Protein
Kinase(92-227)
pdb|3OCP|B Chain B, Crystal Structure Of Camp Bound Cgmp-Dependent Protein
Kinase(92-227)
pdb|3OD0|A Chain A, Crystal Structure Of Cgmp Bound Cgmp-Dependent Protein
Kinase(92-227)
pdb|3OD0|B Chain B, Crystal Structure Of Cgmp Bound Cgmp-Dependent Protein
Kinase(92-227)
pdb|3OGJ|A Chain A, Crystal Structure Of Partial Apo (92-227) Of
Cgmp-Dependent Protein Kinase
pdb|3OGJ|B Chain B, Crystal Structure Of Partial Apo (92-227) Of
Cgmp-Dependent Protein Kinase
pdb|3OGJ|C Chain C, Crystal Structure Of Partial Apo (92-227) Of
Cgmp-Dependent Protein Kinase
pdb|3OGJ|D Chain D, Crystal Structure Of Partial Apo (92-227) Of
Cgmp-Dependent Protein Kinase
Length = 139
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
K+ + + I+ A+ D+ + L SQ ++DCM VE ++K+G G YV+
Sbjct: 13 KSPQSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMED 72
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
G+ EV K G ++ T FGELA++YN A+V+ + N LWA+ R+
Sbjct: 73 GKVEVT-----KEG-----VKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDRQ 122
Query: 583 DFRGILM 589
F+ I+M
Sbjct: 123 CFQTIMM 129
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 862 HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN 921
H PL +A ++ ++ H +++R + P +++D + L++ DF K LS
Sbjct: 105 HGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164
Query: 922 ---RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVA 978
+T + G Y +PE +G+ D +++G+++Y ML GE PF E+ + I
Sbjct: 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG--ETAVSIAI 222
Query: 979 K 979
K
Sbjct: 223 K 223
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 865 LDEQSARFCAASVVAALEDLHKRG-----VLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
LDE+ + AL++ H+R VL+R + P + LD +++L DF + L+
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 167
Query: 920 GNRTF--TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ +F T G Y++PE + + +D W+LG L+Y + PF ++ + E +
Sbjct: 168 HDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--LA 225
Query: 978 AKIAKGQL-SLPQNLSPEAVDLLTKLLVVDENTR 1010
KI +G+ +P S E +++T++L + + R
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHR 259
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFG--KGLSGNRTFTICGMAD 931
++ AL H +++R V P ++L + S ++L F G SG G
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 198
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSL-PQ- 989
++APE+V+ + +G D W GV+++ +L G +PF +E + I KG+ + P+
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER---LFEGIIKGKYKMNPRQ 255
Query: 990 --NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
++S A DL+ ++L++D R+ HPW ++ D
Sbjct: 256 WSHISESAKDLVRRMLMLDPAERITVY---EALNHPWLKERD 294
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLML---DKSGHLQLVDFRFG--KGLSGNRTFTICGMAD 931
++ AL H +++R V P ++L + S ++L F G SG G
Sbjct: 141 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 200
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSL-PQ- 989
++APE+V+ + +G D W GV+++ +L G +PF +E + I KG+ + P+
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER---LFEGIIKGKYKMNPRQ 257
Query: 990 --NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029
++S A DL+ ++L++D R+ HPW ++ D
Sbjct: 258 WSHISESAKDLVRRMLMLDPAERITVY---EALNHPWLKERD 296
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A
Putative Auto-Inhibition State
Length = 340
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 874 AASVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTI-CGMAD 931
A S+V ALE LH K V++R V P ++++ G +++ DF L + TI G
Sbjct: 159 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP 218
Query: 932 YLAPEIVQG----KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
Y+APE + KG+ + +D W+LG+ + + P+ SW + + + L
Sbjct: 219 YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL 278
Query: 988 PQN-LSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDVDWKG 1032
P + S E VD ++ L + R PT + HP+F + KG
Sbjct: 279 PADKFSAEFVDFTSQCLKKNSKER-----PTYPELMQHPFFTLHESKG 321
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 865 LDEQSARFCAASVVAALEDLHKRG-----VLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
LDE+ + AL++ H+R VL+R + P + LD +++L DF + L+
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 167
Query: 920 GNRTFT--ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ +F G Y++PE + + +D W+LG L+Y + PF ++ + E +
Sbjct: 168 HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--LA 225
Query: 978 AKIAKGQL-SLPQNLSPEAVDLLTKLLVVDENTR 1010
KI +G+ +P S E +++T++L + + R
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHR 259
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 140/351 (39%), Gaps = 69/351 (19%)
Query: 95 LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKL 154
LRY S +G+ ++ + + I P G + FF V+DGH G+Q +++ L
Sbjct: 22 LRYGLSSMQGW---RVEMEDAHTAVIGLPSGL-ESWSFFAVYDGHA--GSQVAKYCCEHL 75
Query: 155 CENLLRNNKFH--------EDAVDACHSSYLTTNSQLHADVLDDSM-----SGTTAVTVL 201
+++ N F E+ + + +L + H V+ + SG+TAV VL
Sbjct: 76 LDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDE--HMRVMSEKKHGADRSGSTAVGVL 133
Query: 202 VRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIE 261
+ + Y N GDSR +L R + D P E ER++ +G V+ + ++
Sbjct: 134 ISPQHTYFINCGDSRGLLCRNRKVHF----FTQDHKPSNPLEKERIQNAGGSVM-IQRVN 188
Query: 262 GLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIG--------VVAN 313
G A +R++GD + + V
Sbjct: 189 G------------------------------SLAVSRALGDFDYKCVHGKGPTEQLVSPE 218
Query: 314 PEIVVWELT-NDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQY 372
PE+ E + D F +LA DG+++ + ++ + D V + D + E L Y
Sbjct: 219 PEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCL-Y 277
Query: 373 ETRTDDITVIVV---HINGLKNTAVNQSIPPGVFLRTPVPQVIEVTGSESP 420
+ D+++VI++ + + AV + +L V ++I+ G P
Sbjct: 278 KGSRDNMSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIKKQGEGVP 328
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT--FTICGMADYLA 934
+ +ALE +H R V++R + P + + +G ++L D G+ S T ++ G Y++
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMS 204
Query: 935 PEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
PE + G+ +D W+LG L+Y M + PF + + + KI
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI 250
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 140/351 (39%), Gaps = 69/351 (19%)
Query: 95 LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKL 154
LRY S +G+ ++ + + I P G + FF V+DGH G+Q +++ L
Sbjct: 22 LRYGLSSMQGW---RVEMEDAHTAVIGLPSGL-ESWSFFAVYDGHA--GSQVAKYCCEHL 75
Query: 155 CENLLRNNKFH--------EDAVDACHSSYLTTNSQLHADVLDDSM-----SGTTAVTVL 201
+++ N F E+ + + +L + H V+ + SG+TAV VL
Sbjct: 76 LDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDE--HMRVMSEKKHGADRSGSTAVGVL 133
Query: 202 VRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIE 261
+ + Y N GDSR +L R + D P E ER++ +G V+ + ++
Sbjct: 134 ISPQHTYFINCGDSRGLLCRNRKVHF----FTQDHKPSNPLEKERIQNAGGSVM-IQRVN 188
Query: 262 GLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIG--------VVAN 313
G A +R++GD + + V
Sbjct: 189 G------------------------------SLAVSRALGDFDYKCVHGKGPTEQLVSPE 218
Query: 314 PEIVVWELT-NDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQY 372
PE+ E + D F +LA DG+++ + ++ + D V + D + E L Y
Sbjct: 219 PEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCL-Y 277
Query: 373 ETRTDDITVIVV---HINGLKNTAVNQSIPPGVFLRTPVPQVIEVTGSESP 420
+ D+++VI++ + + AV + +L V ++I+ G P
Sbjct: 278 KGSRDNMSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIKKQGEGVP 328
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 23/188 (12%)
Query: 862 HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-G 920
H LDE A + +V+A+ L + +++R + + +++ + ++L+DF L G
Sbjct: 124 HPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG 183
Query: 921 NRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAK 979
+T CG +Y APE++ G + G + W+LGV +Y ++ E PF E+
Sbjct: 184 KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------- 236
Query: 980 IAKGQLSLPQNLSPEAVDLLTKLL--VVDENTRLGSQGPTSVKTHPW------FRDVDWK 1031
+ + P +S E + L++ LL V + T L + T PW D W+
Sbjct: 237 -VEAAIHPPYLVSKELMSLVSGLLQPVPERRTTL-----EKLVTDPWVTQPVNLADYTWE 290
Query: 1032 GIAESTSP 1039
+ P
Sbjct: 291 EVFRVNKP 298
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 865 LDEQSARFCAASVVAALEDLHKRG-----VLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919
LDE+ + AL++ H+R VL+R + P + LD +++L DF + L+
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 167
Query: 920 GNRTFT--ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ F G Y++PE + + +D W+LG L+Y + PF ++ + E +
Sbjct: 168 HDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--LA 225
Query: 978 AKIAKGQL-SLPQNLSPEAVDLLTKLLVVDENTR 1010
KI +G+ +P S E +++T++L + + R
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHR 259
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 122/296 (41%), Gaps = 65/296 (21%)
Query: 77 FLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVF 136
FL + A LRY S +G+ + D + + P G +D FF V+
Sbjct: 6 FLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDA---HTAVVGIPHGL-EDWSFFAVY 61
Query: 137 DGHGEFGAQCSQFVKRKLCENLLRNNKFH-------------EDAVDACHSSYLTTNSQL 183
DGH G++ + + L E++ N F E+ + + +L + +
Sbjct: 62 DGHA--GSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYM 119
Query: 184 -HADVLDDSM--SGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFR 240
+ L + M SG+TAV V++ + IY N GDSRAVL R G+ + D P
Sbjct: 120 RNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLY-RNGQVCFSTQ---DHKPCN 175
Query: 241 EDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSI 300
E ER++ +G V+ + ++ G A +R++
Sbjct: 176 PREKERIQNAGGSVM-IQRVNG------------------------------SLAVSRAL 204
Query: 301 GDSIAETIG------VVANPEIVVWEL--TNDHPFFVLASDGVFEFLSSQAVVDMV 348
GD + + + +PE V+E+ + F +LA DG+++ +S++ + + V
Sbjct: 205 GDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILAXDGIWDVMSNEELCEYV 260
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 874 AASVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTI-CGMAD 931
A S+V ALE LH K V++R V P ++++ G +++ DF L + I G
Sbjct: 115 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP 174
Query: 932 YLAPEIVQ----GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
Y+APE + KG+ + +D W+LG+ + + P+ SW + + + L
Sbjct: 175 YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL 234
Query: 988 PQN-LSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDVDWKG 1032
P + S E VD ++ L + R PT + HP+F + KG
Sbjct: 235 PADKFSAEFVDFTSQCLKKNSKER-----PTYPELMQHPFFTLHESKG 277
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 221 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 221 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 100 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 159
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 219
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 220 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 252
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 221 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 221 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 93/230 (40%), Gaps = 52/230 (22%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++H LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 113 LCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID 975
S N T + Y APE++ G G+ D W++G ++ +++G + F ID
Sbjct: 173 TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG--TDHID 230
Query: 976 IVAKIAKGQLSLP---------------------------QNLSP--------------- 993
K+ + QL P + L P
Sbjct: 231 QWNKVIE-QLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKT 289
Query: 994 -EAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSPVPH 1042
+A DLL+K+LV+D + R+ HP+ W AE+ +P P
Sbjct: 290 SQARDLLSKMLVIDPDKRISVD---EALRHPYI--TVWYDPAEAEAPPPQ 334
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 222 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 254
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 221 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 222 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 254
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 222 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 254
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 222 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 254
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 221 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1
Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human Chk1
Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 221 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 222 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 254
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT- 923
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 924 ---FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+CG Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 222 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 254
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase
Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain Kinase
Loc340156
Length = 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSP-DVLMLDKSG-HLQLVDFRFGKGLSGNRTFTI-CGMADYL 933
+ + +H+ +L+ + P ++L +++ ++++DF + + G ++L
Sbjct: 196 ICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFL 255
Query: 934 APEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEI--DIVAKIAKGQLSLPQNL 991
APE+V D W++GV+ Y +L G PF ++E +I+A + Q++
Sbjct: 256 APEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDI 315
Query: 992 SPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRD 1027
S EA + ++KLL+ +++ R+ + + HPW D
Sbjct: 316 SEEAKEFISKLLIKEKSWRISA---SEALKHPWLSD 348
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 92/230 (40%), Gaps = 52/230 (22%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++H LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID 975
N T + Y APE++ G G+ D W++G ++ +++G + F ID
Sbjct: 175 TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQG--TDHID 232
Query: 976 IVAKIAKGQLSLP---------------------------QNLSP--------------- 993
K+ + QL P + L P
Sbjct: 233 QWNKVIE-QLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKT 291
Query: 994 -EAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSPVPH 1042
+A DLL+K+LV+D + R+ HP+ W AE+ +P P
Sbjct: 292 SQARDLLSKMLVIDPDKRISVD---EALRHPYI--TVWYDPAEAEAPPPQ 336
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 34/208 (16%)
Query: 848 LLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
L+ ++ L I+ E+ ++ ++ L+ +H GV++R + P L +++ L
Sbjct: 106 LVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCEL 165
Query: 908 QLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF 966
+++DF + T + Y APE++ H D W++G ++ ML G+ F
Sbjct: 166 KILDFGLARHADAEMTGYVVTRW-YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 224
Query: 967 -GSWRESEIDIVAKI----------------AKGQL-SLPQN-----------LSPEAVD 997
G ++ + K+ AK + SLPQ SP+A D
Sbjct: 225 KGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAAD 284
Query: 998 LLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
LL K+L +D + RL + THP+F
Sbjct: 285 LLEKMLELDVDKRLTA---AQALTHPFF 309
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 8/162 (4%)
Query: 876 SVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--RTFTICGMADYL 933
S + LE LH ++R + ++L+ GH +L DF L+ + + G ++
Sbjct: 133 STLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWM 192
Query: 934 APEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESE-IDIVAKIAKGQLSLPQNLS 992
APE++Q G+ AD W+LG+ M +G+ P+ I ++ P+ S
Sbjct: 193 APEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWS 252
Query: 993 PEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIA 1034
D + + LV R + T + HP+ R KG++
Sbjct: 253 DNFTDFVKQCLVKSPEQRATA---TQLLQHPFVRSA--KGVS 289
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 34/208 (16%)
Query: 848 LLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
L+ ++ L I+ E+ ++ ++ L+ +H GV++R + P L +++ L
Sbjct: 124 LVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCEL 183
Query: 908 QLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF 966
+++DF + T + Y APE++ H D W++G ++ ML G+ F
Sbjct: 184 KILDFGLARHADAEMTGYVVTRW-YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 242
Query: 967 -GSWRESEIDIVAKI----------------AKGQL-SLPQN-----------LSPEAVD 997
G ++ + K+ AK + SLPQ SP+A D
Sbjct: 243 KGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAAD 302
Query: 998 LLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
LL K+L +D + RL + THP+F
Sbjct: 303 LLEKMLELDVDKRLTA---AQALTHPFF 327
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Emodin
At 1.92 A Resolution
Length = 332
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 44/221 (19%)
Query: 848 LLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS-GH 906
L+ Y+ +L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 106 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 165
Query: 907 LQLVDFRFGKGLSGNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEM 964
L+L+D+ + + + + + Y PE +V + + + D W+LG + M+ +
Sbjct: 166 LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKE 225
Query: 965 PFGSWRESEIDIVAKIA-------------KGQLSLPQNL-------------------- 991
PF ++ D + KIA K ++ L L
Sbjct: 226 PFFYGHDNH-DQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 284
Query: 992 ----SPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
SPEA+D L KLL D RL + THP+F+ V
Sbjct: 285 QHLVSPEAIDFLDKLLRYDHQERLTA---LEAMTHPYFQQV 322
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2
(Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2
(Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9- OneCK2
KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 44/210 (20%)
Query: 859 SILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS-GHLQLVDFRFGKG 917
+L+ L + R+ ++ AL+ H +G+++R V P +M+D L+L+D+ +
Sbjct: 116 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
Query: 918 LSGNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID 975
+ + + + Y PE +V + + + D W+LG + M+ + PF ++ D
Sbjct: 176 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNH-D 234
Query: 976 IVAKIA-------------KGQLSLPQNL------------------------SPEAVDL 998
+ KIA K ++ L L SPEA+D
Sbjct: 235 QLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDF 294
Query: 999 LTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
L KLL D RL + THP+F+ V
Sbjct: 295 LDKLLRYDHQERLTA---LEAMTHPYFQQV 321
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 44/221 (19%)
Query: 848 LLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS-GH 906
L+ Y+ +L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 164
Query: 907 LQLVDFRFGKGLSGNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEM 964
L+L+D+ + + + + + Y PE +V + + + D W+LG + M+ +
Sbjct: 165 LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKE 224
Query: 965 PFGSWRESEIDIVAKIA-------------KGQLSLPQNL-------------------- 991
PF ++ D + KIA K ++ L L
Sbjct: 225 PFFYGHDNH-DQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 992 ----SPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
SPEA+D L KLL D RL + THP+F+ V
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTA---LEAMTHPYFQQV 321
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 44/221 (19%)
Query: 848 LLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS-GH 906
L+ Y+ +L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 164
Query: 907 LQLVDFRFGKGLSGNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEM 964
L+L+D+ + + + + + Y PE +V + + + D W+LG + M+ +
Sbjct: 165 LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKE 224
Query: 965 PFGSWRESEIDIVAKIA-------------KGQLSLPQNL-------------------- 991
PF ++ D + KIA K ++ L L
Sbjct: 225 PFFYGHDNH-DQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 992 ----SPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
SPEA+D L KLL D RL + THP+F+ V
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTA---LEAMTHPYFQQV 321
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase Ck2
In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein Kinase
Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With Tbb-
Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With Tbb-
Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With Tbb-
Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With Tetrabromobenzoimidazole
K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With Tetrabromobenzoimidazole
Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With Tetrabromobenzoimidazole
Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With Tetrabromobenzoimidazole
Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 44/210 (20%)
Query: 859 SILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS-GHLQLVDFRFGKG 917
+L+ L + R+ ++ AL+ H +G+++R V P +M+D L+L+D+ +
Sbjct: 117 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 176
Query: 918 LSGNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID 975
+ + + + Y PE +V + + + D W+LG + M+ + PF ++ D
Sbjct: 177 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNH-D 235
Query: 976 IVAKIA-------------KGQLSLPQNL------------------------SPEAVDL 998
+ KIA K ++ L L SPEA+D
Sbjct: 236 QLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDF 295
Query: 999 LTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
L KLL D RL + THP+F+ V
Sbjct: 296 LDKLLRYDHQERLTA---LEAMTHPYFQQV 322
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 44/221 (19%)
Query: 848 LLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS-GH 906
L+ Y+ +L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 107 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 166
Query: 907 LQLVDFRFGKGLSGNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEM 964
L+L+D+ + + + + + Y PE +V + + + D W+LG + M+ +
Sbjct: 167 LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKE 226
Query: 965 PFGSWRESEIDIVAKIA-------------KGQLSLPQNL-------------------- 991
PF ++ D + KIA K ++ L L
Sbjct: 227 PFFYGHDNH-DQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 285
Query: 992 ----SPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
SPEA+D L KLL D RL + THP+F+ V
Sbjct: 286 QHLVSPEAIDFLDKLLRYDHQERLTA---LEAMTHPYFQQV 323
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor
Luteolin
Length = 326
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 44/221 (19%)
Query: 848 LLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS-GH 906
L+ Y+ +L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 164
Query: 907 LQLVDFRFGKGLSGNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEM 964
L+L+D+ + + + + + Y PE +V + + + D W+LG + M+ +
Sbjct: 165 LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKE 224
Query: 965 PFGSWRESEIDIVAKIA-------------KGQLSLPQNL-------------------- 991
PF ++ D + KIA K ++ L L
Sbjct: 225 PFFYGHDNH-DQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 992 ----SPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
SPEA+D L KLL D RL + THP+F+ V
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTA---LEAMTHPYFQQV 321
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 44/221 (19%)
Query: 848 LLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS-GH 906
L+ Y+ +L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 164
Query: 907 LQLVDFRFGKGLSGNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEM 964
L+L+D+ + + + + + Y PE +V + + + D W+LG + M+ +
Sbjct: 165 LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKE 224
Query: 965 PFGSWRESEIDIVAKIA-------------KGQLSLPQNL-------------------- 991
PF ++ D + KIA K ++ L L
Sbjct: 225 PFFYGHDNH-DQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 992 ----SPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
SPEA+D L KLL D RL + THP+F+ V
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTA---LEAMTHPYFQQV 321
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 42/220 (19%)
Query: 848 LLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS-GH 906
L+ Y+ +L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 126 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 185
Query: 907 LQLVDFRFGKGLSGNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEM 964
L+L+D+ + + + + + Y PE +V + + + D W+LG + M+ +
Sbjct: 186 LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKE 245
Query: 965 PFGSWRESEIDIV------------AKIAKGQLSLPQNL--------------------- 991
PF ++ +V A + K ++ L L
Sbjct: 246 PFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQ 305
Query: 992 ---SPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
SPEA+D L KLL D RL + THP+F+ V
Sbjct: 306 HLVSPEAIDFLDKLLRYDHQERLTA---LEAMTHPYFQQV 342
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor
Apigenin
Length = 326
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 44/221 (19%)
Query: 848 LLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS-GH 906
L+ Y+ +L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 164
Query: 907 LQLVDFRFGKGLSGNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEM 964
L+L+D+ + + + + + Y PE +V + + + D W+LG + M+ +
Sbjct: 165 LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKE 224
Query: 965 PFGSWRESEIDIVAKIA-------------KGQLSLPQNL-------------------- 991
PF ++ D + KIA K ++ L L
Sbjct: 225 PFFYGHDNH-DQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 992 ----SPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
SPEA+D L KLL D RL + THP+F+ V
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTA---LEAMTHPYFQQV 321
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 874 AASVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTI-CGMAD 931
A S+V ALE LH K V++R V P ++++ G ++ DF L + I G
Sbjct: 142 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKP 201
Query: 932 YLAPEIVQ----GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
Y APE + KG+ + +D W+LG+ + P+ SW + + + L
Sbjct: 202 YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQL 261
Query: 988 PQN-LSPEAVDLLTKLLVVDENTRLGSQGPT--SVKTHPWFRDVDWKG 1032
P + S E VD ++ L + R PT + HP+F + KG
Sbjct: 262 PADKFSAEFVDFTSQCLKKNSKER-----PTYPELXQHPFFTLHESKG 304
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L+ ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++GV++ M++G + F
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L+ ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++GV++ M++G + F
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 129/304 (42%), Gaps = 42/304 (13%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
+ + D+E + S C ++ + R + + +++K+ + K K + + +L
Sbjct: 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILM----DLDV 76
Query: 825 SVSPSACVPQILC-----TCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVA 879
+ C + C T D A L+ T A L + P+ E+ ++V
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAMELMGT-CAEKLKKRMQGPIPERILGKMTVAIVK 135
Query: 880 ALEDL-HKRGVLYRGVSPDVLMLDKSGHLQLVDFRF-GKGLSGNRTFTICGMADYLAPEI 937
AL L K GV++R V P ++LD+ G ++L DF G+ + G A Y+APE
Sbjct: 136 ALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPER 195
Query: 938 VQ-----GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-------GQL 985
+ + + AD W+LG+ + + G+ P+ + + ++ +++ K+ + G +
Sbjct: 196 IDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK-TDFEVLTKVLQEEPPLLPGHM 254
Query: 986 SLPQNLSPEAVDLLT----------KLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAE 1035
+ D LT KLL E++ + V WF+DV +A+
Sbjct: 255 GFSGDFQSFVKDCLTKDHRKRPKYNKLL---EHSFIKRYETLEVDVASWFKDV----MAK 307
Query: 1036 STSP 1039
+ SP
Sbjct: 308 TESP 311
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of
The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 48/219 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H +G+++R V P +M+D + L+L+D+ +
Sbjct: 125 LYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH 184
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ PF +++ D +
Sbjct: 185 PAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDN-YDQL 243
Query: 978 AKIAK--------------------------GQLSLPQ-----------NLSPEAVDLLT 1000
+IAK GQ S + +SPEA+DLL
Sbjct: 244 VRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLD 303
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSP 1039
KLL D RL ++ HP+F V + E + P
Sbjct: 304 KLLRYDHQQRLTAK---EAMEHPYFYPV----VKEQSQP 335
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 48/219 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H G+++R V P +M+D L+L+D+ +
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ + PF ++ D +
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQL 242
Query: 978 AKIAK--------------------------GQLSLP----------QNL-SPEAVDLLT 1000
+IAK G+ S Q+L SPEA+D L
Sbjct: 243 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 302
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSP 1039
KLL D +RL ++ HP+F V + E + P
Sbjct: 303 KLLRYDHQSRLTAR---EAMEHPYFYPV----VKEQSQP 334
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 47/196 (23%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+T + + Y APEI+ G
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 182
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 240
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 241 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 294
Query: 1032 GIAESTSPVPHEIMSR 1047
T PVPH + R
Sbjct: 295 -----TKPVPHLRLER 305
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 925 TIC----GMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVA- 978
+ G Y+APE+++ + H D W+ G+++ ML GE+P+ +S +
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDW 220
Query: 979 KIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
K K L+ + + + LL K+LV + + R+
Sbjct: 221 KEKKTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2
Length = 335
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H G+++R V P +M+D L+L+D+ +
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ + PF ++ D +
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQL 242
Query: 978 AKIAK--------------------------GQLSLP----------QNL-SPEAVDLLT 1000
+IAK G+ S Q+L SPEA+D L
Sbjct: 243 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 302
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
KLL D +RL ++ HP+F V
Sbjct: 303 KLLRYDHQSRLTAR---EAMEHPYFYTV 327
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein
Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human Protein
Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H G+++R V P +M+D L+L+D+ +
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ + PF ++ D +
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQL 242
Query: 978 AKIAK--------------------------GQLSLP----------QNL-SPEAVDLLT 1000
+IAK G+ S Q+L SPEA+D L
Sbjct: 243 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 302
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
KLL D +RL ++ HP+F V
Sbjct: 303 KLLRYDHQSRLTAR---EAMEHPYFYTV 327
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H G+++R V P +M+D L+L+D+ +
Sbjct: 122 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 181
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ + PF ++ D +
Sbjct: 182 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQL 240
Query: 978 AKIAK--------------------------GQLSLP----------QNL-SPEAVDLLT 1000
+IAK G+ S Q+L SPEA+D L
Sbjct: 241 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 300
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
KLL D +RL ++ HP+F V
Sbjct: 301 KLLRYDHQSRLTAR---EAMEHPYFYTV 325
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H G+++R V P +M+D L+L+D+ +
Sbjct: 123 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ + PF ++ D +
Sbjct: 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQL 241
Query: 978 AKIAK--------------------------GQLSLP----------QNL-SPEAVDLLT 1000
+IAK G+ S Q+L SPEA+D L
Sbjct: 242 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 301
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
KLL D +RL ++ HP+F V
Sbjct: 302 KLLRYDHQSRLTAR---EAMEHPYFYTV 326
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A Pyridocarbazole
Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H G+++R V P +M+D L+L+D+ +
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ + PF ++ D +
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQL 242
Query: 978 AKIAK--------------------------GQLSLP----------QNL-SPEAVDLLT 1000
+IAK G+ S Q+L SPEA+D L
Sbjct: 243 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 302
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
KLL D +RL ++ HP+F V
Sbjct: 303 KLLRYDHQSRLTAR---EAMEHPYFYTV 327
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL---QLVDFRFGKGL-SG 920
L E R + + +AL LH+ +++R + P+ ++L +++D + K L G
Sbjct: 119 LKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG 178
Query: 921 NRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
G YLAPE+++ K + + D+W+ G L + + G PF
Sbjct: 179 ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H G+++R V P +M+D L+L+D+ +
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ + PF ++ D +
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQL 242
Query: 978 AKIAK--------------------------GQLSLP----------QNL-SPEAVDLLT 1000
+IAK G+ S Q+L SPEA+D L
Sbjct: 243 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 302
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
KLL D +RL ++ HP+F V
Sbjct: 303 KLLRYDHQSRLTAR---EAMEHPYFYTV 327
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 44/208 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H +G+++R V P +M+D + L+L+D+ +
Sbjct: 130 LYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH 189
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ PF +++ D +
Sbjct: 190 PAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDN-YDQL 248
Query: 978 AKIAK--------------------------GQLSLPQ-----------NLSPEAVDLLT 1000
+IAK GQ S + +SPEA+DLL
Sbjct: 249 VRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLD 308
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
KLL D RL ++ HP+F V
Sbjct: 309 KLLRYDHQQRLTAK---EAMEHPYFYPV 333
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha Subunit
In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha Subunit
In Complex With The Inhibitor Cx-5279
Length = 337
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H G+++R V P +M+D L+L+D+ +
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ + PF ++ D +
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQL 242
Query: 978 AKIAK--------------------------GQLSLP----------QNL-SPEAVDLLT 1000
+IAK G+ S Q+L SPEA+D L
Sbjct: 243 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 302
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
KLL D +RL ++ HP+F V
Sbjct: 303 KLLRYDHQSRLTAR---EAMEHPYFYTV 327
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin
At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin
At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin
At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H G+++R V P +M+D L+L+D+ +
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ + PF ++ D +
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQL 242
Query: 978 AKIAK--------------------------GQLSLP----------QNL-SPEAVDLLT 1000
+IAK G+ S Q+L SPEA+D L
Sbjct: 243 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 302
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
KLL D +RL ++ HP+F V
Sbjct: 303 KLLRYDHQSRLTAR---EAMEHPYFYTV 327
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL---QLVDFRFGKGL-SG 920
L E R + + +AL LH+ +++R + P+ ++L +++D + K L G
Sbjct: 118 LKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG 177
Query: 921 NRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
G YLAPE+++ K + + D+W+ G L + + G PF
Sbjct: 178 ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein
Kinase Ck2
Length = 329
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H G+++R V P +M+D L+L+D+ +
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ + PF ++ D +
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQL 242
Query: 978 AKIAK--------------------------GQLSLP----------QNL-SPEAVDLLT 1000
+IAK G+ S Q+L SPEA+D L
Sbjct: 243 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 302
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
KLL D +RL ++ HP+F V
Sbjct: 303 KLLRYDHQSRLTAR---EAMEHPYFYTV 327
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT--ICGMADYLA 934
+ AL+ +H R +L+R + + L K G +QL DF + L+ G YL+
Sbjct: 134 ICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLS 193
Query: 935 PEIVQGKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIVAKIAKGQL 985
PEI + K + +D WALG ++Y + + F GS + ++V KI G
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK----NLVLKIISGSF 242
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With The
Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2 Catalytic
Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2 Catalytic
Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H G+++R V P +M+D L+L+D+ +
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ + PF ++ D +
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQL 242
Query: 978 AKIAK--------------------------GQLSLP----------QNL-SPEAVDLLT 1000
+IAK G+ S Q+L SPEA+D L
Sbjct: 243 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 302
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
KLL D +RL ++ HP+F V
Sbjct: 303 KLLRYDHQSRLTAR---EAMEHPYFYTV 327
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein Kinase
Ck2 (c- Terminal Deletion Mutant 1-335) In Complex With
Two Sulfate Ions
Length = 334
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H G+++R V P +M+D L+L+D+ +
Sbjct: 123 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ + PF ++ D +
Sbjct: 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQL 241
Query: 978 AKIAK--------------------------GQLSLP----------QNL-SPEAVDLLT 1000
+IAK G+ S Q+L SPEA+D L
Sbjct: 242 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 301
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
KLL D +RL ++ HP+F V
Sbjct: 302 KLLRYDHQSRLTAR---EAMEHPYFYTV 326
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 925 TIC----GMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+ G Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 221 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+T + + Y APEI+ G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 178
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 290
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 291 -----TKPVPH 296
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+T + + Y APEI+ G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 177
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 289
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 290 -----TKPVPH 295
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+T + + Y APEI+ G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 177
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 289
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 290 -----TKPVPH 295
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 925 TIC----GMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+ G Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 221 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor Efp
With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor Efq
With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With 3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl Pyrimidine,
Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+T + + Y APEI+ G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 178
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 290
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 291 -----TKPVPH 296
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With Cell
Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The Inhibitor
Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex
With 4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex
With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In Complex
With 4-[(6-amino-4-pyrimidinyl) Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2 (Cdk2)
In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-2-
Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2- Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A Pyrazolo[1,
5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A Pyrazolo[1,
5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar Study,
Crystal Structure In Complex With Cdk2, Selectivity, And
Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl Pyrimidine,
Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea (At9283),
A Multi-Targeted Kinase Inhibitor With Potent Aurora
Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its
Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its
Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole Type
Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole Type
Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole Type
Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of 2-Anilino-4-(Thiazol-5-Yl)
Pyrimidine Transcriptional Cdk Inhibitors As Anticancer
Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of 2-Anilino-4-(Thiazol-5-Yl)
Pyrimidine Transcriptional Cdk Inhibitors As Anticancer
Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+T + + Y APEI+ G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 177
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 289
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 290 -----TKPVPH 295
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+T + + Y APEI+ G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 178
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 290
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 291 -----TKPVPH 296
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+T + + Y APEI+ G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 177
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 289
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 290 -----TKPVPH 295
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 925 TIC----GMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+ G Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 221 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+T + + Y APEI+ G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 178
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 290
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 291 -----TKPVPH 296
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic
Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A Potent
Inhibitor
Length = 340
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H G+++R V P +M+D L+L+D+ +
Sbjct: 129 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 188
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ + PF ++ D +
Sbjct: 189 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQL 247
Query: 978 AKIAK--------------------------GQLSLP----------QNL-SPEAVDLLT 1000
+IAK G+ S Q+L SPEA+D L
Sbjct: 248 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 307
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
KLL D +RL ++ HP+F V
Sbjct: 308 KLLRYDHQSRLTAR---EAMEHPYFYTV 332
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
+ E A+ ++A + LH G+ +R + P+ L+LD+ +L++ DF N
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 925 TIC----GMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMP----------FGSW 969
+ G Y+APE+++ + H D W+ G+++ ML GE+P + W
Sbjct: 162 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
Query: 970 RESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVDENTRL 1011
+E K L+ + + + LL K+LV + + R+
Sbjct: 222 KEK---------KTYLNPWKKIDSAPLALLHKILVENPSARI 254
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRF------GKGL 918
LDE + V+ LE LHK G ++R V ++L + G +Q+ DF G +
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 177
Query: 919 SGNRTF-TICGMADYLAPEIV-QGKGHGLAADWWALGVLIYFMLQGEMPFGSW 969
+ N+ T G ++APE++ Q +G+ AD W+ G+ + G P+ +
Sbjct: 178 TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY 230
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+T + + Y APEI+ G
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 179
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 291
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 292 -----TKPVPH 297
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of 6-cyclohexylmethoxy-8-isopropyl-9h-
Purin-2-ylamine And Monomeric Cdk2
Length = 299
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+T + + Y APEI+ G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGX 178
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 290
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 291 -----TKPVPH 296
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 44/203 (21%)
Query: 863 TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GN 921
T L + + ++ + H+ +L+R + P L+++ G L+L DF +
Sbjct: 114 TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV 173
Query: 922 RTFT--ICGMADYLAPEIVQG-KGHGLAADWWALGVLIYFMLQG---------------- 962
R++T + + Y AP+++ G K + + D W++G + M+ G
Sbjct: 174 RSYTHEVVTLW-YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI 232
Query: 963 ----------------EMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVD 1006
E+P W++ + K K S+ E +DLL+ +L D
Sbjct: 233 FSILGTPNPREWPQVQELPL--WKQRTFQVFEK--KPWSSIIPGFCQEGIDLLSNMLCFD 288
Query: 1007 ENTRLGSQGPTSVKTHPWFRDVD 1029
N R+ ++ HP+F+D+D
Sbjct: 289 PNKRISAR---DAMNHPYFKDLD 308
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 44/203 (21%)
Query: 863 TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GN 921
T L + + ++ + H+ +L+R + P L+++ G L+L DF +
Sbjct: 114 TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV 173
Query: 922 RTFT--ICGMADYLAPEIVQG-KGHGLAADWWALGVLIYFMLQG---------------- 962
R++T + + Y AP+++ G K + + D W++G + M+ G
Sbjct: 174 RSYTHEVVTLW-YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI 232
Query: 963 ----------------EMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLLVVD 1006
E+P W++ + K K S+ E +DLL+ +L D
Sbjct: 233 FSILGTPNPREWPQVQELPL--WKQRTFQVFEK--KPWSSIIPGFCQEGIDLLSNMLCFD 288
Query: 1007 ENTRLGSQGPTSVKTHPWFRDVD 1029
N R+ ++ HP+F+D+D
Sbjct: 289 PNKRISAR---DAMNHPYFKDLD 308
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L+ ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++G + F
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of 8-Anilino-1-Naphthalene
Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+T + + Y APEI+ G
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGC 185
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 243
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 297
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 298 -----TKPVPH 303
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+T + + Y APEI+ G
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLGX 185
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 243
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 297
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 298 -----TKPVPH 303
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRF------GKGL 918
LDE + V+ LE LHK G ++R V ++L + G +Q+ DF G +
Sbjct: 113 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 172
Query: 919 SGNRTF-TICGMADYLAPEIV-QGKGHGLAADWWALGVLIYFMLQGEMPFGSW 969
+ N+ T G ++APE++ Q +G+ AD W+ G+ + G P+ +
Sbjct: 173 TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY 225
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 29/203 (14%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG 920
L PL E + + AL LH +++R + ++ G ++L DF G+S
Sbjct: 128 LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADF----GVSA 183
Query: 921 NRTFTI------CGMADYLAPEIV-----QGKGHGLAADWWALGVLIYFMLQGEMPFGSW 969
T TI G ++APE+V + + + AD W+LG+ + M + E P
Sbjct: 184 KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
Query: 970 RESEIDIVAKIAKGQ---LSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
+ + ++ KIAK + L+ P S D L K L + + R + + + HP F
Sbjct: 244 --NPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTT---SQLLQHP-FV 297
Query: 1027 DVDWKG-----IAESTSPVPHEI 1044
VD IAE+ + V E+
Sbjct: 298 TVDSNKPIRELIAEAKAEVTEEV 320
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L+ ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++G + F
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L+ ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++G + F
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 44/208 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLS 919
L L + RF ++ AL+ H G+++R V P +M+D L+L+D+ +
Sbjct: 124 LRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ + PF ++ D +
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQL 242
Query: 978 AKIAK--------------------------GQLSLP----------QNL-SPEAVDLLT 1000
+IAK G+ S Q+L SPEA+D L
Sbjct: 243 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 302
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
KLL D +RL ++ HP+F V
Sbjct: 303 KLLRYDHQSRLTAR---EAMEHPYFYTV 327
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Query: 878 VAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGL-SGNRTFTICGMAD-YLAP 935
+ LE LH+ +L+R + P+ L+LD++G L+L DF K S NR + + Y AP
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAP 181
Query: 936 EIVQG-KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
E++ G + +G+ D WA+G ++ +L +PF +S++D + +I
Sbjct: 182 ELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPG-DSDLDQLTRI 225
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 36/187 (19%)
Query: 876 SVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQLVDF-----RFGKGLSGNRTFTICGM 929
SV+ + +H ++ + +R V P +++DK+G ++L DF K + G+R G
Sbjct: 159 SVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR-----GT 213
Query: 930 ADYLAPEIVQGKG--HGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+++ PE + +G D W+LG+ +Y M +PF S + S +++ I +
Sbjct: 214 YEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF-SLKISLVELFNNIRTKNIEY 272
Query: 988 PQN-------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
P + LS E +D L L + R+ S+ H W D
Sbjct: 273 PLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK---HEWLADT 329
Query: 1029 DWKGIAE 1035
+ + + E
Sbjct: 330 NIEDLRE 336
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P+ L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 178
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 290
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 291 -----TKPVPH 296
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 865 LDEQSARFCAASVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+ EQ + +V+ L L K +++R V P ++++ G ++L DF L +
Sbjct: 120 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 179
Query: 924 FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGS 968
+ G Y++PE +QG + + +D W++G+ + M G P GS
Sbjct: 180 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGS 224
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 865 LDEQSARFCAASVVAALEDLHKRG--VLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNR 922
LDE+ A V + LH R +++R + L++DK +++ DF GLS +
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDF----GLSRLK 189
Query: 923 TFTI------CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDI 976
T G +++APE+++ + +D ++ GV+++ + + P+G+ +++
Sbjct: 190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA 249
Query: 977 VAKIAKGQLSLPQNLSPEAVDLL 999
+L +P+NL+P+ ++
Sbjct: 250 AVGFKCKRLEIPRNLNPQVAAII 272
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLS 919
L+ L + RF ++ AL+ H G+++R V P +++D L+L+D+ +
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYH 183
Query: 920 GNRTFTICGMADYL-APE-IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ + + + Y PE +V + + + D W+LG ++ M+ + PF ++ D +
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQL 242
Query: 978 AKIAK--------------------------GQLSLP----------QNL-SPEAVDLLT 1000
+IAK G+ S Q+L SPEA+D L
Sbjct: 243 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 302
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
KLL D +RL ++ HP+F V
Sbjct: 303 KLLRYDHQSRLTAR---EAMEHPYFYTV 327
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P+ L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 179
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 291
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 292 -----TKPVPH 297
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With Atp
Length = 299
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P+ L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 179
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 291
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 292 -----TKPVPH 297
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With Atp
Length = 301
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P+ L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 181
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 293
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 294 -----TKPVPH 299
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P+ L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 180
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 292
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 293 -----TKPVPH 298
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L+ ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++G + F
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 13/216 (6%)
Query: 791 RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850
+D+ +++K+F + + K++ ++E L+K + V +L C L+
Sbjct: 47 KDTGRIVAIKKFLESDDDKMVKKI-AMREIKLLKQLRHENLV-NLLEVCKKKKRWYLVFE 104
Query: 851 TYLACPLASILHTP--LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
L + P LD Q + ++ + H +++R + P+ +++ +SG ++
Sbjct: 105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVK 164
Query: 909 LVDFRFGKGLSGNRTFTICGMAD--YLAPEIVQGK-GHGLAADWWALGVLIYFMLQGEMP 965
L DF F + L+ +A Y APE++ G +G A D WA+G L+ M GE
Sbjct: 165 LCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPL 224
Query: 966 FGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001
F +S+ID + I + NL P +L K
Sbjct: 225 FPG--DSDIDQLYHI----MMCLGNLIPRHQELFNK 254
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN-- 921
PLDE ++ L+ LH ++R + ++L + G ++L DF L+
Sbjct: 100 PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 159
Query: 922 RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMP 965
+ T G ++APE+++ + AD W+LG+ + +GE P
Sbjct: 160 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 27/160 (16%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-----------------GLS 919
++ AL +H +G+++R + P + +D+S ++++ DF K G S
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 920 GNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVA 978
N T I G A Y+A E++ G GH D ++LG++ + M+ PF + E ++I+
Sbjct: 185 DNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGME-RVNILK 239
Query: 979 KIAKGQLSLPQNLSPEAVDLLTKLLVV----DENTRLGSQ 1014
K+ + P + + + K++ + D N R G++
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 29/158 (18%)
Query: 855 CPLASILHTPLDEQSARF---------CAASVVAALEDLHKRGVLYRGVSPDVLML---- 901
CP S L+T L+E S + VV + L + G+++R + P +M
Sbjct: 91 CPCGS-LYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE 149
Query: 902 DKSGHLQLVDFRFGKGLSGNRTF-TICGMADYLAPEIVQ--------GKGHGLAADWWAL 952
D +L DF + L + F ++ G +YL P++ + K +G D W++
Sbjct: 150 DGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI 209
Query: 953 GVLIYFMLQGEMPF----GSWRESEIDIVAKIAKGQLS 986
GV Y G +PF G R E ++ KI G+ S
Sbjct: 210 GVTFYHAATGSLPFRPFEGPRRNKE--VMYKIITGKPS 245
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A Gamma-
Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A Gamma-
Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With A
Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With A
Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN Complex
With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN Complex
With The Inhibitor N-&-N1
Length = 299
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 178
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 290
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 291 -----TKPVPH 296
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 180
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 292
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 293 -----TKPVPH 298
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 27/160 (16%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-----------------GLS 919
++ AL +H +G+++R + P + +D+S ++++ DF K G S
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 920 GNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVA 978
N T I G A Y+A E++ G GH D ++LG++ + M+ PF + E ++I+
Sbjct: 185 DNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGME-RVNILK 239
Query: 979 KIAKGQLSLPQNLSPEAVDLLTKLLVV----DENTRLGSQ 1014
K+ + P + + + K++ + D N R G++
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN-- 921
PLDE ++ L+ LH ++R + ++L + G ++L DF L+
Sbjct: 120 PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 179
Query: 922 RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMP 965
+ T G ++APE+++ + AD W+LG+ + +GE P
Sbjct: 180 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 178
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 290
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 291 -----TKPVPH 296
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap) In
Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site Phosphorylation:
Cdk2 Y15p T160p In Complex With Cyclin A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site Phosphorylation:
Cdk2 Y15p T160p In Complex With Cyclin A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium Ion
Length = 298
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 177
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 289
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 290 -----TKPVPH 295
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS
Length = 296
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 177
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 289
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 290 -----TKPVPH 295
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The
Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The
Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 178
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 290
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 291 -----TKPVPH 296
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 91/229 (39%), Gaps = 52/229 (22%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID 975
+ T + Y APE++ G G+ D W++G ++ M++G + F ID
Sbjct: 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG--TDHID 233
Query: 976 IVAKIAKGQLSLP-----QNLSP------------------------------------- 993
K+ + QL P + L P
Sbjct: 234 QWNKVIE-QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 292
Query: 994 -EAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSPVP 1041
+A DLL+K+LV+D + R+ HP+ W +E+ +P P
Sbjct: 293 SQARDLLSKMLVIDASKRISVD---EALQHPYIN--VWYDPSEAEAPPP 336
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++G + F
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 179
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 291
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 292 -----TKPVPH 297
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++G + F
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++D FG
Sbjct: 117 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD--FGL 174
Query: 917 GLSGNRTFTICGMA---DYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ +F + Y APE++ G G+ D W++G ++ M++G + F
Sbjct: 175 ARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 227
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
PLDE ++ L+ LH ++R + ++L + G ++L DF G++G T
Sbjct: 115 PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADF----GVAGQLT 170
Query: 924 FT------ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMP 965
T G ++APE+++ + AD W+LG+ + +GE P
Sbjct: 171 DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 181
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 293
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 294 -----TKPVPH 299
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 180
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 292
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 293 -----TKPVPH 298
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With Atp
Length = 302
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 181
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 293
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 294 -----TKPVPH 299
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 181
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 293
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 294 -----TKPVPH 299
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 180
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 292
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 293 -----TKPVPH 298
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 179
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 291
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 292 -----TKPVPH 297
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
PLDE ++ L+ LH ++R + ++L + G ++L DF G++G T
Sbjct: 100 PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADF----GVAGQLT 155
Query: 924 FT------ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMP 965
T G ++APE+++ + AD W+LG+ + +GE P
Sbjct: 156 DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 181
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 293
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 294 -----TKPVPH 299
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 181
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 293
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 294 -----TKPVPH 299
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN-- 921
P DE ++ L+ LH ++R + ++L + G ++L DF L+
Sbjct: 116 PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 175
Query: 922 RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMP 965
+ T G ++APE++Q + AD W+LG+ + +GE P
Sbjct: 176 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT Peptide
From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT Peptide
From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 182
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 240
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031
L + LL+++L D N R+ ++ + HP+F+DV
Sbjct: 241 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQDV--- 294
Query: 1032 GIAESTSPVPH 1042
T PVPH
Sbjct: 295 -----TKPVPH 300
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG 920
L PL E + + AL LH +++R + ++ G ++L DF G+S
Sbjct: 128 LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADF----GVSA 183
Query: 921 NRTFTI------CGMADYLAPEIV-----QGKGHGLAADWWALGVLIYFMLQGEMPFGSW 969
T I G ++APE+V + + + AD W+LG+ + M + E P
Sbjct: 184 KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
Query: 970 RESEIDIVAKIAKGQ---LSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
+ + ++ KIAK + L+ P S D L K L + + R + + + HP F
Sbjct: 244 --NPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTT---SQLLQHP-FV 297
Query: 1027 DVDWKG-----IAESTSPVPHEI 1044
VD IAE+ + V E+
Sbjct: 298 TVDSNKPIRELIAEAKAEVTEEV 320
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 27/160 (16%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK-----------------GLS 919
++ AL +H +G+++R + P + +D+S ++++ DF K G S
Sbjct: 125 ILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 920 GNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVA 978
N T I G A Y+A E++ G GH D ++LG++ + + PF + E ++I+
Sbjct: 185 DNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXE-RVNILK 239
Query: 979 KIAKGQLSLPQNLSPEAVDLLTKLLVV----DENTRLGSQ 1014
K+ + P + + K++ + D N R G++
Sbjct: 240 KLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG 920
L PL E + + AL LH +++R + ++ G ++L DF G+S
Sbjct: 128 LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADF----GVSA 183
Query: 921 NRTFTI------CGMADYLAPEIV-----QGKGHGLAADWWALGVLIYFMLQGEMPFGSW 969
T I G ++APE+V + + + AD W+LG+ + M + E P
Sbjct: 184 KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
Query: 970 RESEIDIVAKIAKGQ---LSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026
+ + ++ KIAK + L+ P S D L K L + + R + + + HP F
Sbjct: 244 --NPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTT---SQLLQHP-FV 297
Query: 1027 DVDWKG-----IAESTSPVPHEI 1044
VD IAE+ + V E+
Sbjct: 298 TVDSNKPIRELIAEAKAEVTEEV 320
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A
Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With A
Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A
Tetracyclic Atp Site Inhibitor
Length = 299
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 66/168 (39%), Gaps = 32/168 (19%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQLVDFRFGKGLSGNRT 923
E+ A S+ A++ LH + +R V P+ L+ + L+L DF F K +G +
Sbjct: 116 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKY 175
Query: 924 FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEID--IVAKIA 981
C D W+LGV++Y +L G PF S I + +I
Sbjct: 176 DKSC--------------------DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 215
Query: 982 KGQLSLPQ----NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
GQ P +S E L+ LL + R+ T HPW
Sbjct: 216 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI---TEFMNHPWI 260
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 865 LDEQSARFCAASVVAALEDL-HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+ EQ + +V+ L L K +++R V P ++++ G ++L DF L +
Sbjct: 163 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 222
Query: 924 FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ G Y++PE +QG + + +D W++G+ + M G P E++++
Sbjct: 223 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 276
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 93/197 (47%), Gaps = 32/197 (16%)
Query: 848 LLNTYLACPLASILHT-PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
L+ T + L +I+ + L ++ +F ++ L+ +H G+++R + P + +++
Sbjct: 110 LVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSE 169
Query: 907 LQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMP 965
L+++DF + T + Y APEI+ H D W++G ++ +LQG+
Sbjct: 170 LRILDFGLARQADEEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
Query: 966 F-GS------WRESEI------DIVAKIAKGQL-----SLP-----------QNLSPEAV 996
F GS R E+ +++AKI+ SLP + +P A+
Sbjct: 229 FPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAI 288
Query: 997 DLLTKLLVVDENTRLGS 1013
DLL ++LV+D + R+ +
Sbjct: 289 DLLGRMLVLDSDQRVSA 305
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++G + F
Sbjct: 175 TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 41/212 (19%)
Query: 848 LLNTYLACPLASIL-HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
L+ ++ L ++ H L E +F ++ L +H G+++R + P L +++
Sbjct: 107 LVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCE 166
Query: 907 LQLVDFRFGKGLSGNRTFTICGMAD---YLAPEIVQG-KGHGLAADWWALGVLIYFMLQG 962
L+++DF GL+ + G Y APE++ + D W++G ++ M+ G
Sbjct: 167 LKILDF----GLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG 222
Query: 963 EMPF-GSWRESEIDIVAKI----------------AKGQLS-LPQ-----------NLSP 993
+ F GS ++ + K+ AK + LP+ N SP
Sbjct: 223 KTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASP 282
Query: 994 EAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
AV+LL K+LV+D R+ + HP+F
Sbjct: 283 LAVNLLEKMLVLDAEQRVTA---GEALAHPYF 311
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 85/191 (44%), Gaps = 34/191 (17%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 151 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 210
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKI-- 980
+ Y APEI+ H + D W++G ++ +L G F G+ +++ + ++
Sbjct: 211 YVATRW-YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG 269
Query: 981 --------------AKGQL-SLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
A+ + SLPQ +P AVDLL K+LV+D + R+ +
Sbjct: 270 TPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITA- 328
Query: 1015 GPTSVKTHPWF 1025
+ HP+F
Sbjct: 329 --SEALAHPYF 337
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 29/158 (18%)
Query: 855 CPLASILHTPLDEQSARF---------CAASVVAALEDLHKRGVLYRGVSPDVLML---- 901
CP S L+T L+E S + VV + L + G+++R + P +M
Sbjct: 91 CPCGS-LYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE 149
Query: 902 DKSGHLQLVDFRFGKGLSGNRTFT-ICGMADYLAPEIVQ--------GKGHGLAADWWAL 952
D +L DF + L + F + G +YL P++ + K +G D W++
Sbjct: 150 DGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI 209
Query: 953 GVLIYFMLQGEMPF----GSWRESEIDIVAKIAKGQLS 986
GV Y G +PF G R E ++ KI G+ S
Sbjct: 210 GVTFYHAATGSLPFRPFEGPRRNKE--VMYKIITGKPS 245
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 32/197 (16%)
Query: 848 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
L+ T + L +I+ L ++ +F ++ L+ +H G+++R + P + +++
Sbjct: 110 LVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSE 169
Query: 907 LQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMP 965
L+++DF + T + Y APEI+ H D W++G ++ +LQG+
Sbjct: 170 LRILDFGLARQADEEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
Query: 966 F-GS------WRESEI------DIVAKIAKGQL-----SLP-----------QNLSPEAV 996
F GS R E+ +++AKI+ SLP + +P A+
Sbjct: 229 FPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAI 288
Query: 997 DLLTKLLVVDENTRLGS 1013
DLL ++LV+D + R+ +
Sbjct: 289 DLLGRMLVLDSDQRVSA 305
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind
E804
Length = 324
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 78/196 (39%), Gaps = 42/196 (21%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS----- 919
++ + + ++ L H++ VL+R + P L++++ G L+L DF + S
Sbjct: 97 INMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 156
Query: 920 -GNRTFTICGMADYLAPEIVQGK-GHGLAADWWALGVLIYFMLQGEMPF-GSWRESEIDI 976
N T+ Y P+I+ G + D W +G + Y M G F GS E ++
Sbjct: 157 YDNEVVTLW----YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHF 212
Query: 977 VAKI---------------------------AKGQLSLPQNLSPEAVDLLTKLLVVDENT 1009
+ +I A+ LS L + DLLTKLL +
Sbjct: 213 IFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRN 272
Query: 1010 RLGSQGPTSVKTHPWF 1025
R+ ++ HP+F
Sbjct: 273 RISAE---DAMKHPFF 285
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 884 LHKRGVLYRGVSPDVLMLDKS---GHLQLVDFRFGKGLS-GNRTFTICGMADYLAPEIVQ 939
LH+ +++ + P ++L G +++VDF + + I G +YLAPEI+
Sbjct: 147 LHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILN 206
Query: 940 GKGHGLAADWWALGVLIYFMLQGEMPF--GSWRESEIDIVAKIAKGQLSLPQNLSPEAVD 997
A D W +G++ Y +L PF +E+ ++I ++S A D
Sbjct: 207 YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATD 266
Query: 998 LLTKLLVVDENTRLGSQGPTS--VKTHPWFRDVDWKGI 1033
+ LLV + R PT+ +H W + D++ +
Sbjct: 267 FIQSLLVKNPEKR-----PTAEICLSHSWLQQWDFENL 299
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
PL+E ++ L+ LH ++R + ++L + G ++L DF G++G T
Sbjct: 112 PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADF----GVAGQLT 167
Query: 924 FT------ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMP 965
T G ++APE+++ + AD W+LG+ + +GE P
Sbjct: 168 DTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG 920
L PL E + + AL LH +++R + ++ G ++L DF G+S
Sbjct: 101 LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADF----GVSA 156
Query: 921 NRTFT-------ICGMADYLAPEIV-----QGKGHGLAADWWALGVLIYFMLQGEMPFGS 968
T T G ++APE+V + + + AD W+LG+ + M + E P
Sbjct: 157 KNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE 216
Query: 969 WRESEIDIVAKIAKGQ---LSLPQNLSPEAVDLLTKLLVVDENTR 1010
+ + ++ KIAK + L+ P S D L K L + + R
Sbjct: 217 L--NPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDAR 259
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 878 VAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEI 937
+A L + H+ +++R V P ++++ G ++L DF L + + G Y+APE
Sbjct: 127 LAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPER 184
Query: 938 VQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV--AKIAKGQLSLPQNLS 992
+QG + + +D W++G+ + + G P E++ + + G+ P ++S
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSIS 241
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 865 LDEQSARFCAASVVAALEDL-HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+ EQ + +V+ L L K +++R V P ++++ G ++L DF L +
Sbjct: 128 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 187
Query: 924 FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ G Y++PE +QG + + +D W++G+ + M G P E++++
Sbjct: 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 241
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/139 (20%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 865 LDEQSARFCAASVVAALEDLHKRG--VLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN- 921
LDE+ A V + LH R +++R + L++DK +++ DF + +
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXF 193
Query: 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
+ G +++APE+++ + +D ++ GV+++ + + P+G+ +++
Sbjct: 194 LXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF 253
Query: 981 AKGQLSLPQNLSPEAVDLL 999
+L +P+NL+P+ ++
Sbjct: 254 KCKRLEIPRNLNPQVAAII 272
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 865 LDEQSARFCAASVVAALEDL-HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+ EQ + +V+ L L K +++R V P ++++ G ++L DF L +
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Query: 924 FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ G Y++PE +QG + + +D W++G+ + M G P E++++
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 865 LDEQSARFCAASVVAALEDL-HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+ EQ + +V+ L L K +++R V P ++++ G ++L DF L +
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Query: 924 FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ G Y++PE +QG + + +D W++G+ + M G P E++++
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 153 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++ ++ F
Sbjct: 213 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++ ++ F
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++ ++ F
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++ ++ F
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++ ++ F
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++ ++ F
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 114 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++ ++ F
Sbjct: 174 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 224
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++ ++ F
Sbjct: 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 226
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 865 LDEQSARFCAASVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+ EQ + +V+ L L K +++R V P ++++ G ++L DF L +
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Query: 924 FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ G Y++PE +QG + + +D W++G+ + M G P
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++ ++ F
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 153 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++ ++ F
Sbjct: 213 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++ ++ F
Sbjct: 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 226
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase
11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 32/197 (16%)
Query: 848 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
L+ T + L +I+ L ++ +F ++ L+ +H G+++R + P + +++
Sbjct: 102 LVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCE 161
Query: 907 LQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMP 965
L+++DF + T + Y APEI+ H D W++G ++ +LQG+
Sbjct: 162 LRILDFGLARQADEEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 220
Query: 966 F-GS------WRESEI------DIVAKIAKGQL-----SLP-----------QNLSPEAV 996
F GS R E+ +++AKI+ SLP + +P A+
Sbjct: 221 FPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAI 280
Query: 997 DLLTKLLVVDENTRLGS 1013
DLL ++LV+D + R+ +
Sbjct: 281 DLLGRMLVLDSDQRVSA 297
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++ ++ F
Sbjct: 169 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++ ++ F
Sbjct: 169 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 108 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++ ++ F
Sbjct: 168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 865 LDEQSARFCAASVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+ EQ + +V+ L L K +++R V P ++++ G ++L DF L +
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Query: 924 FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ G Y++PE +QG + + +D W++G+ + M G P E++++
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 865 LDEQSARFCAASVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+ EQ + +V+ L L K +++R V P ++++ G ++L DF L +
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Query: 924 FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIV 977
+ G Y++PE +QG + + +D W++G+ + M G P E++++
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 108 LXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ T + Y APE++ G G+ D W++G ++ M++ ++ F
Sbjct: 168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 871 RFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG-LSGNRTFTICGM 929
R A S++ L+ LHK +++ + P+ ++L + G + FG R +T
Sbjct: 203 RKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQS 262
Query: 930 ADYLAPEIVQGKGHGLAADWWALGVLIYFMLQG 962
Y APE++ G +G+ D W+LG ++ +L G
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 870 ARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG-LSGNRTFTICG 928
R A S++ L+ LHK +++ + P+ ++L + G + FG R +T
Sbjct: 202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQ 261
Query: 929 MADYLAPEIVQGKGHGLAADWWALGVLIYFMLQG 962
Y APE++ G +G+ D W+LG ++ +L G
Sbjct: 262 SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEM 964
+ T + Y APE++ G G+ D W++G ++ GEM
Sbjct: 169 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIM-----GEM 212
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 90/220 (40%), Gaps = 40/220 (18%)
Query: 842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898
+MH L+ + LA ++H + Q ++ ++ L LH+ GV++R + P
Sbjct: 105 AMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGN 164
Query: 899 LMLDKSGHLQLVDFRFGK--GLSGNRTFTICGMADYLAPEIV-QGKGHGLAADWWALGVL 955
++L + + + DF + N+T + Y APE+V Q KG D W+ G +
Sbjct: 165 ILLADNNDITICDFNLAREDTADANKTHYVTHRW-YRAPELVMQFKGFTKLVDMWSAGCV 223
Query: 956 IYFMLQGEMPF-GSWRESEIDIVAKI-----------------------------AKGQL 985
+ M + F GS ++++ + ++ A+
Sbjct: 224 MAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWT 283
Query: 986 SLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
++ P A+DL+ K+L + R+ ++ HP+F
Sbjct: 284 AVVPTADPVALDLIAKMLEFNPQRRISTE---QALRHPYF 320
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++DF +
Sbjct: 120 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
Query: 917 GLSGNRTFTICGMADYL-APEIVQGKGHGLAADWWALGVLIYFMLQGEM 964
+ T + Y APE++ G G+ D W++G ++ GEM
Sbjct: 180 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIM-----GEM 223
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 90/220 (40%), Gaps = 40/220 (18%)
Query: 842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898
+MH L+ + LA ++H + Q ++ ++ L LH+ GV++R + P
Sbjct: 105 AMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGN 164
Query: 899 LMLDKSGHLQLVDFRFGK--GLSGNRTFTICGMADYLAPEIV-QGKGHGLAADWWALGVL 955
++L + + + DF + N+T + Y APE+V Q KG D W+ G +
Sbjct: 165 ILLADNNDITICDFNLAREDTADANKTHYVTHRW-YRAPELVMQFKGFTKLVDMWSAGCV 223
Query: 956 IYFMLQGEMPF-GSWRESEIDIVAKI-----------------------------AKGQL 985
+ M + F GS ++++ + ++ A+
Sbjct: 224 MAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWT 283
Query: 986 SLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025
++ P A+DL+ K+L + R+ ++ HP+F
Sbjct: 284 AVVPTADPVALDLIAKMLEFNPQRRISTE---QALRHPYF 320
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 865 LDEQSARFCAASVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+ EQ + +V+ L L K +++R V P ++++ G ++L DF L
Sbjct: 104 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA 163
Query: 924 FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMP 965
G Y++PE +QG + + +D W++G+ + M G P
Sbjct: 164 NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 18/107 (16%)
Query: 876 SVVAALEDLHKRGVLYRGVSP-DVLMLDKSGHLQLVDFRFGKGLSGNRTFTI----CGMA 930
+++ A+ +H+ G+++ + P + L++D G L+L+DF + + T + G
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVD--GMLKLIDFGIANQMQPDTTSVVKDSQVGTV 220
Query: 931 DYLAPEIVQ----GKGHGLAA-------DWWALGVLIYFMLQGEMPF 966
+Y+ PE ++ + +G + D W+LG ++Y+M G+ PF
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD S A + AL L + ++R ++ +++ + ++L DF + + + +
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 167
Query: 925 TICGMA---DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKI 980
++APE + + A+D W GV ++ ++ G PF + + D++ +I
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI 225
Query: 981 AKGQ-LSLPQNLSPEAVDLLTKLLVVDENTR 1010
G+ L +P N P L+TK D + R
Sbjct: 226 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 18/107 (16%)
Query: 876 SVVAALEDLHKRGVLYRGVSP-DVLMLDKSGHLQLVDFRFGKGLSGNRTFTI----CGMA 930
+++ A+ +H+ G+++ + P + L++D G L+L+DF + + T + G
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVD--GMLKLIDFGIANQMQPDTTSVVKDSQVGTV 220
Query: 931 DYLAPEIVQ----GKGHGLAA-------DWWALGVLIYFMLQGEMPF 966
+Y+ PE ++ + +G + D W+LG ++Y+M G+ PF
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD S A + AL L + ++R ++ +++ + ++L DF + + + +
Sbjct: 488 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY 547
Query: 925 TICGMA---DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKI 980
++APE + + A+D W GV ++ ++ G PF + + D++ +I
Sbjct: 548 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI 605
Query: 981 AKGQ-LSLPQNLSPEAVDLLTKLLVVDENTR 1010
G+ L +P N P L+TK D + R
Sbjct: 606 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 636
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++D FG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD--FGL 172
Query: 917 GLSGNRTFTI---CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEM 964
+ +F + Y APE++ G G+ D W++G ++ GEM
Sbjct: 173 ARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIM-----GEM 218
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 98/254 (38%), Gaps = 66/254 (25%)
Query: 124 FGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRN--NKFHEDA---------VDAC 172
F + + +GVF+G+ G + + FV ++L LL N H +A D
Sbjct: 58 FRSENNCFLYGVFNGYD--GNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVV 115
Query: 173 HSSYLTTNSQLHAD----------VLDDSMSG-TTAVTVLVRGRTIYVANSGDSRAVLAE 221
S+L + A+ L+ +SG AV ++ +YVAN G +RA+L +
Sbjct: 116 ERSFLESIDDALAEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCK 175
Query: 222 RRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDP 281
+ L++D T EDEL R+ G + Q+
Sbjct: 176 STVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQV--------------------- 214
Query: 282 PRLWVPNGMYPGTAFTRSIGD-------------SIAETIGVVANPEI-VVWELTNDHPF 327
G+ G TR IGD S A++ ++A PEI L F
Sbjct: 215 -------GIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGF 267
Query: 328 FVLASDGVFEFLSS 341
VL S+G+++ L +
Sbjct: 268 LVLMSEGLYKALEA 281
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD S A + AL L + ++R ++ +++ + ++L DF + + + +
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 167
Query: 925 TICGMA---DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKI 980
++APE + + A+D W GV ++ ++ G PF + + D++ +I
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI 225
Query: 981 AKGQ-LSLPQNLSPEAVDLLTKLLVVDENTR 1010
G+ L +P N P L+TK D + R
Sbjct: 226 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With Cyclin
T
Length = 373
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 121/308 (39%), Gaps = 83/308 (26%)
Query: 812 KEVQVLKEKNLMKSVSPSACVPQILCTCADSMH----------AGLLLNTYLACPLASIL 861
K +Q+LK +N++ + C S++ AGLL N + L+ I
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI- 127
Query: 862 HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-- 919
+ ++ L +H+ +L+R + +++ + G L+L DF + S
Sbjct: 128 ---------KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLA 178
Query: 920 --------GNRTFTICGMADYLAPEIVQG-KGHGLAADWWALGVLIYFM-LQGEMPFGSW 969
NR T+ Y PE++ G + +G D W G ++ M + + G+
Sbjct: 179 KNSQPNRYXNRVVTLW----YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
Query: 970 RESEIDIVAKI-----------------------AKGQLSLPQNL------SPEAVDLLT 1000
+ ++ +++++ KGQ ++ P A+DL+
Sbjct: 235 EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID 294
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSRISQHLDSHFEDSP 1060
KLLV+D R+ S + H +F W + P+P ++ +S HL S FE
Sbjct: 295 KLLVLDPAQRIDSDDALN---HDFF----W------SDPMPSDLKGMLSTHLTSMFE--- 338
Query: 1061 VFQASPPR 1068
+PPR
Sbjct: 339 --YLAPPR 344
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD S A + AL L + ++R ++ +++ + ++L DF + + + +
Sbjct: 105 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 164
Query: 925 TICGMA---DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKI 980
++APE + + A+D W GV ++ ++ G PF + + D++ +I
Sbjct: 165 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI 222
Query: 981 AKGQ-LSLPQNLSPEAVDLLTKLLVVDENTR 1010
G+ L +P N P L+TK D + R
Sbjct: 223 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 253
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 18/107 (16%)
Query: 876 SVVAALEDLHKRGVLYRGVSP-DVLMLDKSGHLQLVDFRFGKGLSGNRTFTI----CGMA 930
+++ A+ +H+ G+++ + P + L++D G L+L+DF + + T + G
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVD--GMLKLIDFGIANQMQPDTTSVVKDSQVGAV 220
Query: 931 DYLAPEIVQ----GKGHGLAA-------DWWALGVLIYFMLQGEMPF 966
+Y+ PE ++ + +G + D W+LG ++Y+M G+ PF
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD S A + AL L + ++R ++ +++ + ++L DF + + + +
Sbjct: 136 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 195
Query: 925 TICGMA---DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKI 980
++APE + + A+D W GV ++ ++ G PF + + D++ +I
Sbjct: 196 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI 253
Query: 981 AKGQ-LSLPQNLSPEAVDLLTKLLVVDENTR 1010
G+ L +P N P L+TK D + R
Sbjct: 254 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 284
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD S A + AL L + ++R ++ +++ + ++L DF + + + +
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY 167
Query: 925 TICGMA---DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKI 980
++APE + + A+D W GV ++ ++ G PF + + D++ +I
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI 225
Query: 981 AKGQ-LSLPQNLSPEAVDLLTKLLVVDENTR 1010
G+ L +P N P L+TK D + R
Sbjct: 226 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD S A + AL L + ++R ++ +++ + ++L DF + + + +
Sbjct: 110 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 169
Query: 925 TICGMA---DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKI 980
++APE + + A+D W GV ++ ++ G PF + + D++ +I
Sbjct: 170 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI 227
Query: 981 AKGQ-LSLPQNLSPEAVDLLTKLLVVDENTR 1010
G+ L +P N P L+TK D + R
Sbjct: 228 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 258
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structure Of The Cdk6-P16ink4a Tumor Suppressor Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 60/227 (26%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-ICGMADYLAP 935
++ L+ LH V++R + P +++ SG ++L DF + S T + Y AP
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 936 EIVQGKGHGLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKI-----AKGQLSLPQ 989
E++ + D W++G + M + + F GS S++D + KI G+ P+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS---SDVDQLGKILDVIGLPGEEDWPR 245
Query: 990 NLS-PEAV---------------------DLLTKLLVVDENTRLGSQGPTSVKTHPWFRD 1027
+++ P DLL K L + R+ + S +HP+F+D
Sbjct: 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY---SALSHPYFQD 302
Query: 1028 VDWKGIAESTSPVPHEIMSRISQHLDSHFEDSPVFQASPPRDVEELN 1074
++ R ++LDSH P ++ ELN
Sbjct: 303 LE-----------------RCKENLDSHL--------PPSQNTSELN 324
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD S A + AL L + ++R ++ +++ + ++L DF + + + +
Sbjct: 488 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 547
Query: 925 TICGMA---DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKI 980
++APE + + A+D W GV ++ ++ G PF + + D++ +I
Sbjct: 548 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI 605
Query: 981 AKGQ-LSLPQNLSPEAVDLLTKLLVVDENTR 1010
G+ L +P N P L+TK D + R
Sbjct: 606 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 636
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD S A + AL L + ++R ++ +++ + ++L DF + + + +
Sbjct: 111 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 170
Query: 925 TICGMA---DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKI 980
++APE + + A+D W GV ++ ++ G PF + + D++ +I
Sbjct: 171 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI 228
Query: 981 AKGQ-LSLPQNLSPEAVDLLTKLLVVDENTR 1010
G+ L +P N P L+TK D + R
Sbjct: 229 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 259
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD S A + AL L + ++R ++ +++ + ++L DF + + + +
Sbjct: 113 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 172
Query: 925 TICGMA---DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKI 980
++APE + + A+D W GV ++ ++ G PF + + D++ +I
Sbjct: 173 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI 230
Query: 981 AKGQ-LSLPQNLSPEAVDLLTKLLVVDENTR 1010
G+ L +P N P L+TK D + R
Sbjct: 231 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 261
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK 916
L ++ LD + + ++ ++ LH G+++R + P +++ L+++D FG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD--FGL 172
Query: 917 GLSGNRTFTI---CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEM 964
+ +F + Y APE++ G G+ D W++G ++ GEM
Sbjct: 173 ARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIM-----GEM 218
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
Length = 317
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDF----RFGKGLSG 920
L E + + LE +H +G +R + P ++L G L+D + + G
Sbjct: 131 LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190
Query: 921 NR-TFTICGMA------DYLAPEIVQGKGHGLA---ADWWALGVLIYFMLQGEMPFGSWR 970
+R T+ A Y APE+ + H + D W+LG ++Y M+ GE P+
Sbjct: 191 SRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF 250
Query: 971 ESEIDIVAKIAKGQLSLPQN--LSPEAVDLLTKLLVVDENTR 1010
+ D VA + QLS+PQ+ S LL ++ VD + R
Sbjct: 251 QKG-DSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQR 291
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 871 RFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG-LSGNRTFTICGM 929
R A S++ L+ LHK +++ + P+ ++L + G + FG R +
Sbjct: 203 RKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQS 262
Query: 930 ADYLAPEIVQGKGHGLAADWWALGVLIYFMLQG 962
Y APE++ G +G+ D W+LG ++ +L G
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 121/308 (39%), Gaps = 83/308 (26%)
Query: 812 KEVQVLKEKNLMKSVSPSACVPQILCTCADSMH----------AGLLLNTYLACPLASIL 861
K +Q+LK +N++ + C S++ AGLL N + L+ I
Sbjct: 68 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI- 126
Query: 862 HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-- 919
+ ++ L +H+ +L+R + +++ + G L+L DF + S
Sbjct: 127 ---------KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLA 177
Query: 920 --------GNRTFTICGMADYLAPEIVQG-KGHGLAADWWALGVLIYFM-LQGEMPFGSW 969
NR T+ Y PE++ G + +G D W G ++ M + + G+
Sbjct: 178 KNSQPNRYXNRVVTLW----YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 233
Query: 970 RESEIDIVAKI-----------------------AKGQLSLPQNL------SPEAVDLLT 1000
+ ++ +++++ KGQ ++ P A+DL+
Sbjct: 234 EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID 293
Query: 1001 KLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSRISQHLDSHFEDSP 1060
KLLV+D R+ S + H +F W + P+P ++ +S HL S FE
Sbjct: 294 KLLVLDPAQRIDSDDALN---HDFF----W------SDPMPSDLKGMLSTHLTSMFE--- 337
Query: 1061 VFQASPPR 1068
+PPR
Sbjct: 338 --YLAPPR 343
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 18/107 (16%)
Query: 876 SVVAALEDLHKRGVLYRGVSP-DVLMLDKSGHLQLVDFRFGKGLSGNRTFTI----CGMA 930
+++ A+ +H+ G+++ + P + L++D G L+L+DF + + T + G
Sbjct: 115 NMLEAVHTIHQHGIVHSDLKPANFLIVD--GMLKLIDFGIANQMQPDTTSVVKDSQVGTV 172
Query: 931 DYLAPEIVQ----GKGHGLAA-------DWWALGVLIYFMLQGEMPF 966
+Y+ PE ++ + +G + D W+LG ++Y+M G+ PF
Sbjct: 173 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 219
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 99/241 (41%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + + T
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG 188
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 189 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P + SR + S D + PP D EE
Sbjct: 308 QALAHAYFAQYHDPDDEPVAD---PYDQSLESRDLLIDEWKSLTYDEVISFVPPPLDQEE 364
Query: 1073 L 1073
+
Sbjct: 365 M 365
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 182 YVATRW-YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 301 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 357
Query: 1073 L 1073
+
Sbjct: 358 M 358
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase
Domain Of Focal Adhesion Kinase With A Phosphorylated
Activation Loop
Length = 276
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD S A + AL L + ++R ++ +++ + ++L DF + + +
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXX 167
Query: 925 TICGMA---DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKI 980
++APE + + A+D W GV ++ ++ G PF + + D++ +I
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI 225
Query: 981 AKGQ-LSLPQNLSPEAVDLLTKLLVVDENTR 1010
G+ L +P N P L+TK D + R
Sbjct: 226 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTG 181
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 182 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 301 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 357
Query: 1073 L 1073
+
Sbjct: 358 M 358
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTG 183
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 184 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 303 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 359
Query: 1073 L 1073
+
Sbjct: 360 M 360
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 39/176 (22%)
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-GNRTFT--ICGMADYLAPEIVQG- 940
H VL+R + P L+++ G ++L DF + RT+ + + Y APEI+ G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-YRAPEILLGC 178
Query: 941 KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----------GQLSLPQ 989
K + A D W+LG + M+ F +SEID + +I + G S+P
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 990 N------------------LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRD 1027
L + LL+++L D N R+ ++ + HP+F+D
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA---HPFFQD 289
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTG 187
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 188 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 247 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 307 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 363
Query: 1073 L 1073
+
Sbjct: 364 M 364
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-ICGMADYLAP 935
++ L+ LH V++R + P +++ SG ++L DF + S T + Y AP
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 936 EIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-----GQLSLPQN 990
E++ + D W++G + M + + F S++D + KI G+ P++
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG--SSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 991 LS-PEAV---------------------DLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028
++ P DLL K L + R+ + S +HP+F+D+
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY---SALSHPYFQDL 303
Query: 1029 D 1029
+
Sbjct: 304 E 304
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating
Mutant
Length = 367
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 98/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + + T
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG 188
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 189 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 308 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 364
Query: 1073 L 1073
+
Sbjct: 365 M 365
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 182 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 301 QALAHAYFAQYHDPDDEPVAD---PTDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 357
Query: 1073 L 1073
+
Sbjct: 358 M 358
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG 186
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 187 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 306 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 362
Query: 1073 L 1073
+
Sbjct: 363 M 363
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 182 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 301 QALAHAYFAQYHDPDDEPVAD---PFDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 357
Query: 1073 L 1073
+
Sbjct: 358 M 358
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGL--SGNR 922
L E+ + ++ L LH+ V++R + ++L ++ ++LVDF L + R
Sbjct: 126 LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR 185
Query: 923 TFTICGMADYLAPEIVQ-----GKGHGLAADWWALGVLIYFMLQGEMPF 966
T G ++APE++ + +D W+LG+ M +G P
Sbjct: 186 RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking
Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking
Site On Its Activator Mkk3b
Length = 360
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKI-- 980
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 182 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 981 --------------AKGQL-SLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
A+ + SL Q +P AVDLL K+LV+D + R+ +
Sbjct: 241 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 301 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 357
Query: 1073 L 1073
+
Sbjct: 358 M 358
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 26/198 (13%)
Query: 833 PQILCTCADSMHAGLLLNTYLACPLASI------LHTPLDEQSARFCAASVVAALEDLHK 886
P I+ H G L CP ++ L L E + ++ AL LH
Sbjct: 76 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 887 RGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTI------CGMADYLAPEIV-- 938
+ +++R + +++ G ++L DF G+S T+ G ++APE+V
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADF----GVSAKNLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 939 ---QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQ---LSLPQNLS 992
+ + AD W+LG+ + M Q E P + + ++ KIAK L P S
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL--NPMRVLLKIAKSDPPTLLTPSKWS 249
Query: 993 PEAVDLLTKLLVVDENTR 1010
E D L L + TR
Sbjct: 250 VEFRDFLKIALDKNPETR 267
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 186
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 187 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 306 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 362
Query: 1073 L 1073
+
Sbjct: 363 M 363
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 121 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 180
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 181 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 239
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 240 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 299
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 300 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 356
Query: 1073 L 1073
+
Sbjct: 357 M 357
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydropyrido-
Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 187
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 188 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 247 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 307 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 363
Query: 1073 L 1073
+
Sbjct: 364 M 364
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG 192
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 193 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 251
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 252 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 311
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 312 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 368
Query: 1073 L 1073
+
Sbjct: 369 M 369
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino Quinoline
Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 182 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 301 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 357
Query: 1073 L 1073
+
Sbjct: 358 M 358
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG 186
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 187 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 306 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 362
Query: 1073 L 1073
+
Sbjct: 363 M 363
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 183
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 184 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 303 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 359
Query: 1073 L 1073
+
Sbjct: 360 M 360
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide Substituted
Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 182 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 301 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 357
Query: 1073 L 1073
+
Sbjct: 358 M 358
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With A
Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 98/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTG 181
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 182 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P + SR + S D + PP D EE
Sbjct: 301 QALAHAYFAQYHDPDDEPVAD---PYDQSLESRDLLIDEWKSLTYDEVISFVPPPLDQEE 357
Query: 1073 L 1073
+
Sbjct: 358 M 358
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 132 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 191
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKI-- 980
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 192 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 250
Query: 981 --------------AKGQL-SLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
A+ + SL Q +P AVDLL K+LV+D + R+ +
Sbjct: 251 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 310
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 311 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 367
Query: 1073 L 1073
+
Sbjct: 368 M 368
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 183
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 184 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 303 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 359
Query: 1073 L 1073
+
Sbjct: 360 M 360
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 188
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 189 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 308 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 364
Query: 1073 L 1073
+
Sbjct: 365 M 365
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG 181
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 182 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 301 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 357
Query: 1073 L 1073
+
Sbjct: 358 M 358
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2-
Carboxamide Inhibitor
Length = 371
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 192
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 193 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 251
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 252 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 311
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 312 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 368
Query: 1073 L 1073
+
Sbjct: 369 M 369
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In
Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 100/244 (40%), Gaps = 42/244 (17%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF GL+ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF----GLARHTDD 177
Query: 925 TICGMAD---YLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAK 979
+ G Y APEI+ H D W++G ++ +L G F G+ ++ ++ +
Sbjct: 178 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 980 IA--------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRL 1011
+ + +P+ +P AVDLL K+LV+D + R+
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 1012 GSQGPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRD 1069
+ + + D D + +A+ P SR + S D + PP D
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLD 354
Query: 1070 VEEL 1073
EE+
Sbjct: 355 QEEM 358
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 187
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKI-- 980
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 188 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
Query: 981 --------------AKGQL-SLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
A+ + SL Q +P AVDLL K+LV+D + R+ +
Sbjct: 247 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 307 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 363
Query: 1073 L 1073
+
Sbjct: 364 M 364
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand Complex
Length = 288
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 81/196 (41%), Gaps = 39/196 (19%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS---GN 921
L+ +A+ ++ + H R VL+R + P L++++ G L++ DF +
Sbjct: 97 LESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156
Query: 922 RTFTICGMADYLAPEIVQG-KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
T I + Y AP+++ G K + D W++G + M+ G F SE D + +I
Sbjct: 157 YTHEIVTLW-YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG--VSEADQLMRI 213
Query: 981 AK-----------GQLSLP------------------QNLSPEAVDLLTKLLVVDENTRL 1011
+ LP + L +DLL+K+L +D N R+
Sbjct: 214 FRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI 273
Query: 1012 GSQGPTSVKTHPWFRD 1027
++ H +F++
Sbjct: 274 TAKQALE---HAYFKE 286
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 182 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 301 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 357
Query: 1073 L 1073
+
Sbjct: 358 M 358
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 193
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKI-- 980
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 194 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
Query: 981 --------------AKGQL-SLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
A+ + SL Q +P AVDLL K+LV+D + R+ +
Sbjct: 253 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 313 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 369
Query: 1073 L 1073
+
Sbjct: 370 M 370
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine Based
Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 187
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKI-- 980
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 188 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
Query: 981 --------------AKGQL-SLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
A+ + SL Q +P AVDLL K+LV+D + R+ +
Sbjct: 247 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 307 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 363
Query: 1073 L 1073
+
Sbjct: 364 M 364
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 876 SVVAALEDLHKRGVLYRGVSP-DVLMLDKSGHLQLVDFRFGKGLSGNRTFTI----CGMA 930
+++ A+ +H+ G+++ + P + L++D G L+L+DF + + T + G
Sbjct: 119 NMLEAVHTIHQHGIVHSDLKPANFLIVD--GMLKLIDFGIANQMQPDTTSVVKDSQVGTV 176
Query: 931 DYLAPEIVQGKGHG-----------LAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAK 979
+Y+ PE ++ +D W+LG ++Y+M G+ PF + I+ ++K
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----QQIINQISK 232
Query: 980 I-----AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG-----SQGPTSVKTHP 1023
+ ++ P + D+L L D R+ + ++THP
Sbjct: 233 LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 286
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 193
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKI-- 980
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 194 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
Query: 981 --------------AKGQL-SLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
A+ + SL Q +P AVDLL K+LV+D + R+ +
Sbjct: 253 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 313 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 369
Query: 1073 L 1073
+
Sbjct: 370 M 370
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 193
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKI-- 980
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 194 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
Query: 981 --------------AKGQL-SLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
A+ + SL Q +P AVDLL K+LV+D + R+ +
Sbjct: 253 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 313 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 369
Query: 1073 L 1073
+
Sbjct: 370 M 370
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 42/244 (17%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF GL+ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF----GLARHTDD 177
Query: 925 TICGMAD---YLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAK 979
+ G Y APEI+ H D W++G ++ +L G F G+ ++ ++ +
Sbjct: 178 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 980 I----------------AKGQL-SLPQ-----------NLSPEAVDLLTKLLVVDENTRL 1011
+ A+ + SL Q +P AVDLL K+LV+D + R+
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 1012 GSQGPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRD 1069
+ + + D D + +A+ P SR + S D + PP D
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLD 354
Query: 1070 VEEL 1073
EE+
Sbjct: 355 QEEM 358
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.1 bits (100), Expect = 9e-04, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 876 SVVAALEDLHKRGVLYRGVSP-DVLMLDKSGHLQLVDFRFGKGLSGNRTFTI----CGMA 930
+++ A+ +H+ G+++ + P + L++D G L+L+DF + + T + G
Sbjct: 116 NMLEAVHTIHQHGIVHSDLKPANFLIVD--GMLKLIDFGIANQMQPDTTSVVKDSQVGTV 173
Query: 931 DYLAPEIVQGKGHG-----------LAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAK 979
+Y+ PE ++ +D W+LG ++Y+M G+ PF + I+ ++K
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----QQIINQISK 229
Query: 980 I-----AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG-----SQGPTSVKTHP 1023
+ ++ P + D+L L D R+ + ++THP
Sbjct: 230 LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 283
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 183
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 184 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 303 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 359
Query: 1073 L 1073
+
Sbjct: 360 M 360
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 43.1 bits (100), Expect = 9e-04, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 876 SVVAALEDLHKRGVLYRGVSP-DVLMLDKSGHLQLVDFRFGKGLSGNRTFTI----CGMA 930
+++ A+ +H+ G+++ + P + L++D G L+L+DF + + T + G
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIVD--GMLKLIDFGIANQMQPDTTSVVKDSQVGTV 192
Query: 931 DYLAPEIVQGKGHG-----------LAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAK 979
+Y+ PE ++ +D W+LG ++Y+M G+ PF + I+ ++K
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----QQIINQISK 248
Query: 980 I-----AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG-----SQGPTSVKTHP 1023
+ ++ P + D+L L D R+ + ++THP
Sbjct: 249 LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 302
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking
Partner
Length = 380
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 201
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKI-- 980
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 202 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 260
Query: 981 --------------AKGQL-SLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
A+ + SL Q +P AVDLL K+LV+D + R+ +
Sbjct: 261 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 321 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 377
Query: 1073 L 1073
+
Sbjct: 378 M 378
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 200
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKI-- 980
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 201 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 259
Query: 981 --------------AKGQL-SLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
A+ + SL Q +P AVDLL K+LV+D + R+ +
Sbjct: 260 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 319
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 320 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 376
Query: 1073 L 1073
+
Sbjct: 377 M 377
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 201
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 202 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 260
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 261 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 321 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 377
Query: 1073 L 1073
+
Sbjct: 378 M 378
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 200
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 201 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 259
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 260 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 319
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 320 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 376
Query: 1073 L 1073
+
Sbjct: 377 M 377
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + T
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 204
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 205 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 263
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 264 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 323
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 324 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 380
Query: 1073 L 1073
+
Sbjct: 381 M 381
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Novel Bosutinib Isoform 1, Previously Thought To Be
Bosutinib
Length = 293
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 26/198 (13%)
Query: 833 PQILCTCADSMHAGLLLNTYLACPLASI------LHTPLDEQSARFCAASVVAALEDLHK 886
P I+ H G L CP ++ L L E + ++ AL LH
Sbjct: 68 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 887 RGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTI------CGMADYLAPEIV-- 938
+ +++R + +++ G ++L DF G+S T+ G ++APE+V
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADF----GVSAKNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 939 ---QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQ---LSLPQNLS 992
+ + AD W+LG+ + M Q E P + + ++ KIAK L P S
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL--NPMRVLLKIAKSDPPTLLTPSKWS 241
Query: 993 PEAVDLLTKLLVVDENTR 1010
E D L L + TR
Sbjct: 242 VEFRDFLKIALDKNPETR 259
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 41/203 (20%)
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----I 926
+ ++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 927 CGMADYLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSW 969
Y APEI + KG+ + D W++G ++ ML F GS
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 970 RESEIDIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGP 1016
+ +++ + + LSLP N +A+DLL K+L + + R+ +
Sbjct: 248 SQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 1017 TSVKTHPW---FRDVDWKGIAES 1036
+ HP+ + D + IAE+
Sbjct: 308 LA---HPYLEQYYDPSDEPIAEA 327
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 41/203 (20%)
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----I 926
+ ++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 927 CGMADYLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSW 969
Y APEI + KG+ + D W++G ++ ML F GS
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 970 RESEIDIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGP 1016
+ +++ + + LSLP N +A+DLL K+L + + R+ +
Sbjct: 248 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 1017 TSVKTHPW---FRDVDWKGIAES 1036
+ HP+ + D + IAE+
Sbjct: 308 LA---HPYLEQYYDPSDEPIAEA 327
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG-HLQLVDFRFGKGLS---- 919
L E A + + LE LH R +L+ V D ++L G H L DF L
Sbjct: 182 LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 241
Query: 920 GNRTFT---ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
G T I G ++APE+V G+ D W+ ++ ML G P+
Sbjct: 242 GKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDL 250
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 251 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 307
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 308 HPYLEQYYDPSDEPIAEA 325
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 253 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 309
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 310 HPYLEQYYDPSDEPIAEA 327
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 37/195 (18%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK--GLSGNR 922
L+ +A+ ++ + H R VL+R + P L++++ G L++ DF + G+ +
Sbjct: 97 LESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156
Query: 923 TFTICGMADYLAPEIVQG-KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA 981
Y AP+++ G K + D W++G + M+ G F SE D + +I
Sbjct: 157 YTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG--VSEADQLMRIF 214
Query: 982 K-----------GQLSLP------------------QNLSPEAVDLLTKLLVVDENTRLG 1012
+ LP + L +DLL+K+L +D N R+
Sbjct: 215 RILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT 274
Query: 1013 SQGPTSVKTHPWFRD 1027
++ H +F++
Sbjct: 275 AKQALE---HAYFKE 286
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 41/203 (20%)
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----I 926
+ ++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 927 CGMADYLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSW 969
Y APEI + KG+ + D W++G ++ ML F GS
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 970 RESEIDIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGP 1016
+ +++ + + LSLP N +A+DLL K+L + + R+ +
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 1017 TSVKTHPW---FRDVDWKGIAES 1036
+ HP+ + D + IAE+
Sbjct: 312 LA---HPYLEQYYDPSDEPIAEA 331
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 41/203 (20%)
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----I 926
+ ++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEY 187
Query: 927 CGMADYLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSW 969
Y APEI + KG+ + D W++G ++ ML F GS
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 970 RESEIDIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGP 1016
+ +++ + + LSLP N +A+DLL K+L + + R+ +
Sbjct: 248 SQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 1017 TSVKTHPW---FRDVDWKGIAES 1036
+ HP+ + D + IAE+
Sbjct: 308 LA---HPYLEQYYDPSDEPIAEA 327
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 37/195 (18%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK--GLSGNR 922
L+ +A+ ++ + H R VL+R + P L++++ G L++ DF + G+ +
Sbjct: 97 LESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156
Query: 923 TFTICGMADYLAPEIVQG-KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIA 981
Y AP+++ G K + D W++G + M+ G F SE D + +I
Sbjct: 157 YTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPG--VSEADQLMRIF 214
Query: 982 K-----------GQLSLP------------------QNLSPEAVDLLTKLLVVDENTRLG 1012
+ LP + L +DLL+K+L +D N R+
Sbjct: 215 RILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT 274
Query: 1013 SQGPTSVKTHPWFRD 1027
++ H +F++
Sbjct: 275 AKQALE---HAYFKE 286
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 41/203 (20%)
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----I 926
+ ++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 927 CGMADYLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSW 969
Y APEI + KG+ + D W++G ++ ML F GS
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 970 RESEIDIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGP 1016
+ +++ + + LSLP N +A+DLL K+L + + R+ +
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 1017 TSVKTHPW---FRDVDWKGIAES 1036
+ HP+ + D + IAE+
Sbjct: 312 LA---HPYLEQYYDPSDEPIAEA 331
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 255 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 311
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 312 HPYLAQYYDPSDEPIAEA 329
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 313
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 314 HPYLEQYYDPSDEPIAEA 331
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 975 D--IVAKIAKGQLSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ I K LSLP N +A+DLL K+L + + R+ + +
Sbjct: 255 NCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 311
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 312 HPYLAQYYDPSDEPIAEA 329
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
Query: 878 VAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLSGNRTFTICGMADYLAPE 936
VA L + + +++R + P L+L G L++ DF + + T G A ++APE
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK-GSAAWMAPE 174
Query: 937 IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG-QLSLPQNLSPEA 995
+ +G + D ++ G++++ ++ PF I+ + G + L +NL
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPI 234
Query: 996 VDLLTKLLVVDENTRLGSQGPTSVKTH 1022
L+T+ D + R + + TH
Sbjct: 235 ESLMTRCWSKDPSQRPSMEEIVKIMTH 261
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 255 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 311
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 312 HPYLEQYYDPSDEPIAEA 329
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 99/241 (41%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF + + +
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMX 203
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKI-- 980
Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 263
Query: 981 --------------AKGQL-SLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
A+ + SL Q +P AVDLL K+LV+D + R+ +
Sbjct: 264 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 323
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 324 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 380
Query: 1073 L 1073
+
Sbjct: 381 M 381
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 257
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 258 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 314
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 315 HPYLEQYYDPSDEPIAEA 332
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 878 VAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMAD--YLAP 935
+ A+ HK ++R V P+ +++ K ++L DF F + L+G + +A Y +P
Sbjct: 112 LQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSP 171
Query: 936 EIVQGKG-HGLAADWWALGVLIYFMLQG 962
E++ G +G D WA+G + +L G
Sbjct: 172 ELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 139 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 258
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 259 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 315
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 316 HPYLEQYYDPSDEPIAEA 333
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 130 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 249
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 250 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 306
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 307 HPYLEQYYDPSDEPIAEA 324
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 313
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 314 HPYLEQYYDPSDEPIAEA 331
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its
Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
Query: 878 VAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQLVDFRFGKGLSGNRTFTICGMADYLAPE 936
VA L + + +++R + P L+L G L++ DF + + T G A ++APE
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK-GSAAWMAPE 173
Query: 937 IVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG-QLSLPQNLSPEA 995
+ +G + D ++ G++++ ++ PF I+ + G + L +NL
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPI 233
Query: 996 VDLLTKLLVVDENTRLGSQGPTSVKTH 1022
L+T+ D + R + + TH
Sbjct: 234 ESLMTRCWSKDPSQRPSMEEIVKIMTH 260
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation
At Position 52
Length = 364
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 313
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 314 HPYLEQYYDPSDEPIAEA 331
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 250
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 251 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 307
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 308 HPYLEQYYDPSDEPIAEA 325
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 141 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 260
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 261 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 317
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 318 HPYLEQYYDPSDEPIAEA 335
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 252
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 253 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 309
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 310 HPYLEQYYDPSDEPIAEA 327
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++D+ + T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTG 181
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 182 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 301 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 357
Query: 1073 L 1073
+
Sbjct: 358 M 358
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 313
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 314 HPYLEQYYDPSDEPIAEA 331
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 257
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 258 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 314
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 315 HPYLEQYYDPSDEPIAEA 332
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 41/203 (20%)
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----I 926
+ ++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 927 CGMADYLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSW 969
Y APEI + KG+ + D W++G ++ ML F GS
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 970 RESEIDIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGP 1016
+ +++ + + LSLP N +A+DLL K+L + + R+ +
Sbjct: 268 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 327
Query: 1017 TSVKTHPW---FRDVDWKGIAES 1036
+ HP+ + D + IAE+
Sbjct: 328 LA---HPYLEQYYDPSDEPIAEA 347
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Query: 874 AASVVAALEDLHKRGV---LYRGV-SPDVLMLDKSGH-------LQLVDFRFGKGLSGNR 922
A + + LH + ++R + S ++L+L K + L++ DF +
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT 170
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK 982
+ G ++APE+++ +D W+ GVL++ +L GE+PF + + +A
Sbjct: 171 KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG--IDGLAVAYGVAM 228
Query: 983 GQLSLP 988
+L+LP
Sbjct: 229 NKLALP 234
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-----ICGMAD 931
++ L+ +H VL+R + P L+L+ + L++ DF + + T
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 272
Query: 975 DIVAKIAKGQ--LSLPQ-----------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ + + LSLP N +A+DLL K+L + + R+ + +
Sbjct: 273 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--- 329
Query: 1022 HPW---FRDVDWKGIAES 1036
HP+ + D + IAE+
Sbjct: 330 HPYLEQYYDPSDEPIAEA 347
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG-HLQLVDFRFGKGLS---- 919
L E A + + LE LH R +L+ V D ++L G H L DF L
Sbjct: 163 LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 222
Query: 920 GNRTFT---ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
G T I G ++APE+V G+ D W+ ++ ML G P+
Sbjct: 223 GKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 42/244 (17%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++DF GL+ +
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF----GLARHTDD 197
Query: 925 TICGMAD---YLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAK 979
+ G Y APEI+ H D W++G ++ +L G F G+ ++ ++ +
Sbjct: 198 EMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
Query: 980 I----------------AKGQL-SLPQ-----------NLSPEAVDLLTKLLVVDENTRL 1011
+ A+ + SL Q +P AVDLL K+LV+D + R+
Sbjct: 258 LVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 317
Query: 1012 GSQGPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRD 1069
+ + + D D + +A+ P SR + S D + PP D
Sbjct: 318 TAAQALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLD 374
Query: 1070 VEEL 1073
EE+
Sbjct: 375 QEEM 378
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-ICGMADYLAP 935
++ L+ LH V++R + P +++ SG ++L DF + S T + Y AP
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 936 EIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
E++ + D W++G + M + + F S++D + KI
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG--SSDVDQLGKI 231
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 119/299 (39%), Gaps = 40/299 (13%)
Query: 112 KANQDSFCIHTPFGTSQDD-HFFGVFDGH-GEFGAQCSQFVKRKLCENLLRNNKFHE--- 166
K +D F + +DD FFGVFDG G+F S+ VK + L+ + + E
Sbjct: 34 KHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDF---ASENVKDLVVPQLISSPAWQEVTE 90
Query: 167 --------DAVD---------ACHSSYLTTNSQL--HADVLDDSMSGTTAVTVLVRGRTI 207
VD A Y +++L + L+ + +T+VT ++ +
Sbjct: 91 XLRSDVPATEVDEKLPQLLDQAVDDXYKNADNELVKXCEQLNKDYASSTSVTAVLAKGFV 150
Query: 208 YVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPD 267
V + GDSR + L++D P E R+ +G V E L N +
Sbjct: 151 AVGHLGDSRIAXGVETPNGLNCEFLTVDHKPDXPHEKLRIXRNGGSV------EYLHNHN 204
Query: 268 VQCWGTEEGDDGDPPRLWVPNGMYPGT-AFTRSIGDSIAETIGVVANPEIVVWELTNDHP 326
+ + GD G P ++R+ G + G+ P++ V +T H
Sbjct: 205 NKPF-IRGGDFS----FRKSRGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQHR 259
Query: 327 FFVLASDGVFEFLSSQAVVDMVAKYK-DPRDACAAIVAESYRLWLQYETRTDDITVIVV 384
+LA+DG+++ S+ V++ + + + R+ A+V + D+IT V
Sbjct: 260 VXILATDGLWDVXSAAQAVEIAXQARQEGRNPAQALVEXTLAEQQSRNQSADNITAXTV 318
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 100/273 (36%), Gaps = 85/273 (31%)
Query: 124 FGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRN--NKFHEDA---------VDAC 172
F + + +GVF+G+ G + + FV ++L LL N H +A D
Sbjct: 56 FRSENNCFLYGVFNGYD--GNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVV 113
Query: 173 HSSYLTT-----------NSQLHADV------------------LDDSMSG-TTAVTVLV 202
S+L + SQL V L+ +SG AV ++
Sbjct: 114 ERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVL 173
Query: 203 RGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEG 262
+YVAN G +RA+L + + L++D T EDEL R+ G + Q+
Sbjct: 174 LNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQV-- 231
Query: 263 LKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGD-------------SIAETIG 309
G+ G TR IGD S A++
Sbjct: 232 --------------------------GIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKP 265
Query: 310 VVANPEI-VVWELTNDHPFFVLASDGVFEFLSS 341
++A PEI L F VL S+G+++ L +
Sbjct: 266 IIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEA 298
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 876 SVVAALEDLHKRGVLYRGVSP-DVLMLDKSGHLQLVDFRFGKGLSGNRTFTI----CGMA 930
+++ A+ +H+ G+++ + P + L++D G L+L+DF + + + G
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIVD--GMLKLIDFGIANQMQPDXXXVVKDSQVGTV 192
Query: 931 DYLAPEIVQGKGHG-----------LAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAK 979
+Y+ PE ++ +D W+LG ++Y+M G+ PF + I+ ++K
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----QQIINQISK 248
Query: 980 I-----AKGQLSLPQNLSPEAVDLLTKLLVVDENTRLG-----SQGPTSVKTHP 1023
+ ++ P + D+L L D R+ + ++THP
Sbjct: 249 LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 302
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 53 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ TFT
Sbjct: 112 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TFT 165
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 201
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 100/273 (36%), Gaps = 85/273 (31%)
Query: 124 FGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRN--NKFHEDA---------VDAC 172
F + + +GVF+G+ G + + FV ++L LL N H +A D
Sbjct: 58 FRSENNCFLYGVFNGYD--GNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVV 115
Query: 173 HSSYLTT-----------NSQLHADV------------------LDDSMSG-TTAVTVLV 202
S+L + SQL V L+ +SG AV ++
Sbjct: 116 ERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVL 175
Query: 203 RGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEG 262
+YVAN G +RA+L + + L++D T EDEL R+ G + Q+
Sbjct: 176 LNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQV-- 233
Query: 263 LKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGD-------------SIAETIG 309
G+ G TR IGD S A++
Sbjct: 234 --------------------------GIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKP 267
Query: 310 VVANPEI-VVWELTNDHPFFVLASDGVFEFLSS 341
++A PEI L F VL S+G+++ L +
Sbjct: 268 IIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEA 300
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 262 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 320
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 321 -----LYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 374
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 410
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 100/244 (40%), Gaps = 42/244 (17%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++D +GL+ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD----RGLARHTDD 177
Query: 925 TICGMAD---YLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAK 979
+ G Y APEI+ H D W++G ++ +L G F G+ ++ ++ +
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 980 IA--------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRL 1011
+ + +P+ +P AVDLL K+LV+D + R+
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 1012 GSQGPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRD 1069
+ + + D D + +A+ P SR + S D + PP D
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLD 354
Query: 1070 VEEL 1073
EE+
Sbjct: 355 QEEM 358
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 259 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 317
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 318 -----LYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 371
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 372 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 407
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 301 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 359
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 360 -----LYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 413
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 414 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 449
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 96/241 (39%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++ F + T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTG 181
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 182 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 301 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 357
Query: 1073 L 1073
+
Sbjct: 358 M 358
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 60 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 118
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 119 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 172
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 208
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 55 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 114 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 167
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 203
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 55 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 114 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 167
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 203
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 55 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 114 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 167
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 203
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 68 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 126
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 127 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 180
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 181 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 216
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 55 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 114 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 167
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 203
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 20/169 (11%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTPLDE----QSA 870
Q+ E K +S + VPQ+ + ++L L P L D ++
Sbjct: 45 QLHLEYRFYKQLSATEGVPQVYYFGPXGKYNAMVLE--LLGPSLEDLFDLCDRTFTLKTV 102
Query: 871 RFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG-----HLQLVDFRFGKGLSGNRT-- 923
A ++ +E +H + ++YR V P+ ++ + G + ++DF K T
Sbjct: 103 LMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKK 162
Query: 924 -------FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMP 965
++ G A Y++ GK D ALG + + L+G +P
Sbjct: 163 HIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP 211
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 56 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 115 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 168
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 169 APAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 204
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 60 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 119 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 172
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 208
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 869 SARFCAASVVAALEDLHKRGVLYRGVSPDVLML--DKSGHLQLVDFRFGKGLSGNRTFTI 926
+ + C A + A +L +++ + P+ ++L K +++VDF L G R +
Sbjct: 144 AQQMCTALLFLATPEL---SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQX 199
Query: 927 CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLS 986
Y +PE++ G + LA D W+LG ++ M GE F +E+D + KI + L
Sbjct: 200 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG--ANEVDQMNKIVE-VLG 256
Query: 987 LPQ----NLSPEAVDLLTKL 1002
+P + +P+A KL
Sbjct: 257 IPPAHILDQAPKARKFFEKL 276
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 57 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 116 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 169
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 170 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 205
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 57 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 116 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 169
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 170 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 205
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 96/241 (39%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++D + T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTG 181
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 182 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 301 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 357
Query: 1073 L 1073
+
Sbjct: 358 M 358
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 57 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 116 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 169
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 170 APAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 205
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG-HLQLVDFRFGKGLS---- 919
L E A + + LE LH R +L+ V D ++L G L DF L
Sbjct: 163 LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 222
Query: 920 GNRTFT---ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
G T I G ++APE+V GK D W+ ++ ML G P+
Sbjct: 223 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 18/155 (11%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 53 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+
Sbjct: 112 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 166
Query: 926 ICGMA---DYLAPEIVQGKGHGLAADWWALGVLIY 957
G + APE + + +D WA GVL++
Sbjct: 167 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 201
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 869 SARFCAASVVAALEDLHKRGVLYRGVSPDVLML--DKSGHLQLVDFRFGKGLSGNRTFTI 926
+ + C A + A +L +++ + P+ ++L K +++VDF L G R +
Sbjct: 163 AQQMCTALLFLATPEL---SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQX 218
Query: 927 CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLS 986
Y +PE++ G + LA D W+LG ++ M GE F +E+D + KI + L
Sbjct: 219 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG--ANEVDQMNKIVE-VLG 275
Query: 987 LPQ----NLSPEAVDLLTKL 1002
+P + +P+A KL
Sbjct: 276 IPPAHILDQAPKARKFFEKL 295
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 24/200 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 74 EFLKEAAVMKEIKHPNLV-QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL 132
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 133 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGD-TYT 186
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEI-DIVAK 979
A + APE + + +D WA GVL++ G P+ S++ D++ K
Sbjct: 187 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEK 246
Query: 980 IAKGQLSLPQNLSPEAVDLL 999
+ + P+ P+ +L+
Sbjct: 247 GYR--MEQPEGCPPKVYELM 264
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG-HLQLVDFRFGKGLS---- 919
L E A + + LE LH R +L+ V D ++L G L DF L
Sbjct: 147 LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206
Query: 920 GNRTFT---ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
G T I G ++APE+V GK D W+ ++ ML G P+
Sbjct: 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 60 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 119 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 172
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 208
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 60 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 119 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 172
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 208
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 55 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 114 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 167
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 203
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG-HLQLVDFRFGKGLS---- 919
L E A + + LE LH R +L+ V D ++L G L DF L
Sbjct: 161 LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 220
Query: 920 GNRTFT---ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
G T I G ++APE+V GK D W+ ++ ML G P+
Sbjct: 221 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 96/241 (39%), Gaps = 36/241 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
L + +F ++ L+ +H +++R + P L +++ L+++D + T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTG 181
Query: 925 TICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIA- 981
+ Y APEI+ H D W++G ++ +L G F G+ ++ ++ ++
Sbjct: 182 YVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 982 -------------------KGQLSLPQ--------NLSPEAVDLLTKLLVVDENTRLGSQ 1014
+ +P+ +P AVDLL K+LV+D + R+ +
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 1015 GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSR--ISQHLDSHFEDSPVFQASPPRDVEE 1072
+ + D D + +A+ P SR + S D + PP D EE
Sbjct: 301 QALAHAYFAQYHDPDDEPVAD---PYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE 357
Query: 1073 L 1073
+
Sbjct: 358 M 358
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 75/183 (40%), Gaps = 30/183 (16%)
Query: 840 ADSMHAGLLLNTYLACPLASILHTP-LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898
AD+ L+ Y+ L +++ L+ ++ ++ ++ LH G+L+R + P
Sbjct: 80 ADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSN 139
Query: 899 LMLDKSGHLQLVDFRFGKGLSGNRTFT-----------------------ICGMADYLAP 935
++L+ H+++ DF + R T Y AP
Sbjct: 140 ILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAP 199
Query: 936 EIVQGK-GHGLAADWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIAKGQLSLPQNLSP 993
EI+ G + D W+LG ++ +L G+ F GS ++++ + G + P N
Sbjct: 200 EILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII----GVIDFPSNEDV 255
Query: 994 EAV 996
E++
Sbjct: 256 ESI 258
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 59 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 117
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 118 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 171
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 172 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 207
>pdb|4EV0|A Chain A, Crystal Structure Of Thermus Thermophilus Catabolite
Activator Protein
pdb|4EV0|D Chain D, Crystal Structure Of Thermus Thermophilus Catabolite
Activator Protein
Length = 216
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF L + + L QR G + QG G Y+V SG+ + T G
Sbjct: 6 LFHGLAPEEVDLALSYFQRRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHL---GGQE 62
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGIL 588
R L +L FGE++L+ AS AV + L AL RED+ ++
Sbjct: 63 RTLALLGPGEL--FGEMSLLDEGERSASAVAVEDTELLALFREDYLALI 109
Score = 30.8 bits (68), Expect = 3.9, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 692 GSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHD 739
G FGE +LL E S +AVAV+D L +E + ++ L ++H+
Sbjct: 71 GELFGEMSLLDEGERSASAVAVEDTELLALFREDYLALIRRLPLVAHN 118
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 55 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+ T+T
Sbjct: 114 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 167
Query: 926 ICGMADY----LAPEIVQGKGHGLAADWWALGVLIY 957
A + APE + + +D WA GVL++
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 203
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 18/155 (11%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 53 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+
Sbjct: 112 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 166
Query: 926 ICGMA---DYLAPEIVQGKGHGLAADWWALGVLIY 957
G + APE + + +D WA GVL++
Sbjct: 167 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 201
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 869 SARFCAASVVAALEDLHKRGVLYRGVSPDVLML--DKSGHLQLVDFRFGKGLSGNRTFTI 926
+ + C A + A +L +++ + P+ ++L K +++VDF L G R +
Sbjct: 163 AQQMCTALLFLATPEL---SIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL-GQRIYQX 218
Query: 927 CGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLS 986
Y +PE++ G + LA D W+LG ++ M GE F +E+D + KI + L
Sbjct: 219 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG--ANEVDQMNKIVE-VLG 275
Query: 987 LPQ----NLSPEAVDLLTKL 1002
+P + +P+A KL
Sbjct: 276 IPPAHILDQAPKARKFFEKL 295
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 18/155 (11%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 56 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+
Sbjct: 115 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 169
Query: 926 ICGMA---DYLAPEIVQGKGHGLAADWWALGVLIY 957
G + APE + + +D WA GVL++
Sbjct: 170 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 204
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 18/155 (11%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHTPL 865
+ LKE +MK + V Q+L C + M G LL+ C + L
Sbjct: 60 EFLKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT 925
+ A + +A+E L K+ ++R ++ ++ ++ +++ DF + ++G+
Sbjct: 119 -----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 173
Query: 926 ICGMA---DYLAPEIVQGKGHGLAADWWALGVLIY 957
G + APE + + +D WA GVL++
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 208
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 880 ALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDF----RFGKGLSGNRTFTICGMADYLAP 935
AL LH +G+++ V P + L G +L DF G +G G Y+AP
Sbjct: 169 ALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE---VQEGDPRYMAP 225
Query: 936 EIVQGKGHGLAADWWALGVLI 956
E++QG +G AAD ++LG+ I
Sbjct: 226 ELLQGS-YGTAADVFSLGLTI 245
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 874 AASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-----LQLVDFRFGKGLSGNRT----- 923
A +++ +E +H + ++YR V P+ ++ + G+ + ++DF K T
Sbjct: 132 AIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIP 191
Query: 924 ----FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMP 965
++ G A Y++ GK D ALG + + L+G +P
Sbjct: 192 YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP 237
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase Erk1
Length = 382
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 38/184 (20%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDF---RFGKGLSGNRTFTICGMAD-- 931
++ L+ +H VL+R + P L+++ + L++ DF R + F +A
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 932 YLAPEI-VQGKGHGLAADWWALGVLIYFMLQGEMPF----------------GSWRESEI 974
Y APEI + KG+ + D W++G ++ ML F GS + ++
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 272
Query: 975 D-IVAKIAKGQL-SLPQ-------NLSP----EAVDLLTKLLVVDENTRLGSQGPTSVKT 1021
+ I+ A+ L SLP L P +A+DLL ++L + N R+ +
Sbjct: 273 NCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVE---EALA 329
Query: 1022 HPWF 1025
HP+
Sbjct: 330 HPYL 333
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 14/107 (13%)
Query: 874 AASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-----LQLVDFRFGKGLSGNRT----- 923
A +++ +E +H + ++YR V P+ ++ + G+ + ++DF K T
Sbjct: 111 AIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIP 170
Query: 924 ----FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
++ G A Y++ GK D ALG + + L+G +P+
Sbjct: 171 YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 217
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD + + ++ L H R VL+R + P L+++++G L+L DF GL+ R F
Sbjct: 98 LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADF----GLA--RAF 151
Query: 925 TI---CGMAD-----YLAPEIVQG-KGHGLAADWWALGVLIYFMLQGEMPF 966
I C A+ Y P+++ G K + + D W+ G + + P
Sbjct: 152 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 14/107 (13%)
Query: 874 AASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-----LQLVDFRFGKGLSGNRT----- 923
A +++ +E +H + ++YR V P+ ++ + G+ + ++DF K T
Sbjct: 111 AIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIP 170
Query: 924 ----FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
++ G A Y++ GK D ALG + + L+G +P+
Sbjct: 171 YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 217
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
Length = 450
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 21/251 (8%)
Query: 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQV---LKEKNLMKSV 826
+M+ K L + E G V+L D R +K VKC+ + L E ++M +
Sbjct: 191 NMKELKLLQTIGKGEFGDVMLGDY-------RGNKVAVKCIKNDATAQAFLAEASVMTQL 243
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLA-CPLASILHTPLDEQSARFC----AASVVAAL 881
S V Q+L + ++ Y+A L L + C + V A+
Sbjct: 244 RHSNLV-QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 302
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
E L ++R ++ +++ + ++ DF K S + T + APE ++ K
Sbjct: 303 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKWTAPEALREK 361
Query: 942 GHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQNLSPEAVDLL 999
+D W+ G+L++ + G +P+ R D+V ++ KG ++ P P D++
Sbjct: 362 KFSTKSDVWSFGILLWEIYSFGRVPYP--RIPLKDVVPRVEKGYKMDAPDGCPPAVYDVM 419
Query: 1000 TKLLVVDENTR 1010
+D TR
Sbjct: 420 KNCWHLDAATR 430
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 74/189 (39%), Gaps = 18/189 (9%)
Query: 780 TDCSEIG------LVLLRDSEN--FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC 831
+D EIG + RD N +++K+ S + K ++KE ++ +
Sbjct: 18 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT 77
Query: 832 VPQILCTCADSMHAGLLLNTYL---ACPLASILHTPLDEQSARFCAASVVAALEDLHKRG 888
+ C + H L+ Y A L + PL E + L LH
Sbjct: 78 IQYRGCYLRE--HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 135
Query: 889 VLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL--- 945
+++R V ++L + G ++L DF ++ F G ++APE++ G
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV--GTPYWMAPEVILAMDEGQYDG 193
Query: 946 AADWWALGV 954
D W+LG+
Sbjct: 194 KVDVWSLGI 202
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS--GNR 922
LD+ A + ++ +H + +++R + P + L + +++ DF L G R
Sbjct: 133 LDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 192
Query: 923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ 961
T + G Y++PE + + +G D +ALG+++ +L
Sbjct: 193 TRSK-GTLRYMSPEQISSQDYGKEVDLYALGLILAELLH 230
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 880 ALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT-FTICGMADYLAPEIV 938
L+ LH +++R + P+ +++ G ++L DF + S F + Y APE++
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVL 183
Query: 939 QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
+ D W++G + M + + F SE D + KI
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKPLFCG--NSEADQLGKI 223
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 74/189 (39%), Gaps = 18/189 (9%)
Query: 780 TDCSEIG------LVLLRDSEN--FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC 831
+D EIG + RD N +++K+ S + K ++KE ++ +
Sbjct: 57 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT 116
Query: 832 VPQILCTCADSMHAGLLLNTYL---ACPLASILHTPLDEQSARFCAASVVAALEDLHKRG 888
+ C + H L+ Y A L + PL E + L LH
Sbjct: 117 IQYRGCYLRE--HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 174
Query: 889 VLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL--- 945
+++R V ++L + G ++L DF ++ F G ++APE++ G
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV--GTPYWMAPEVILAMDEGQYDG 232
Query: 946 AADWWALGV 954
D W+LG+
Sbjct: 233 KVDVWSLGI 241
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 38.1 bits (87), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 51/113 (45%), Gaps = 14/113 (12%)
Query: 868 QSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-----LQLVDFRFGKGLSGNR 922
++ A +++ +E +H + ++YR V P+ ++ + G+ + ++DF K
Sbjct: 97 KTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPE 156
Query: 923 T---------FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
T ++ G A Y++ GK D ALG + + L+G +P+
Sbjct: 157 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 209
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 880 ALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-ICGMADYLAPEIV 938
L+ LH +++R + P+ +++ G ++L DF + S T + Y APE++
Sbjct: 132 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVL 191
Query: 939 QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
+ D W++G + M + + F SE D + KI
Sbjct: 192 LQSTYATPVDMWSVGCIFAEMFRRKPLFCG--NSEADQLGKI 231
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L ++ +++ DF + + N + G +
Sbjct: 208 VARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKW 267
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + K + +D W+ GVL++ + G P+ + E D +++ +G ++ P+
Sbjct: 268 MAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE-DFCSRLREGMRMRAPEY 326
Query: 991 LSPEAVDLL 999
+PE ++
Sbjct: 327 STPEIYQIM 335
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 37.7 bits (86), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Query: 813 EVQVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHT 863
E + ++E +M ++S V Q+ C + M G LLN L + H
Sbjct: 47 EDEFIEEAKVMMNLSHEKLV-QLYGVCTKQRPIFIITEYMANGCLLNY-----LREMRHR 100
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+Q C V A+E L + L+R ++ +++ G +++ DF + + +
Sbjct: 101 FQTQQLLEMCK-DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 159
Query: 924 FTICGM---ADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAK 979
+ G + PE++ +D WA GVL++ + G+MP+ + SE
Sbjct: 160 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEH 217
Query: 980 IAKGQLSLPQNLSPEAV 996
IA+G +L+ E V
Sbjct: 218 IAQGLRLYRPHLASEKV 234
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 37.7 bits (86), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Query: 813 EVQVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHT 863
E + ++E +M ++S V Q+ C + M G LLN L + H
Sbjct: 43 EDEFIEEAKVMMNLSHEKLV-QLYGVCTKQRPIFIITEYMANGCLLNY-----LREMRHR 96
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+Q C V A+E L + L+R ++ +++ G +++ DF + + +
Sbjct: 97 FQTQQLLEMCK-DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 155
Query: 924 FTICGM---ADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAK 979
+ G + PE++ +D WA GVL++ + G+MP+ + SE
Sbjct: 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEH 213
Query: 980 IAKGQLSLPQNLSPEAV 996
IA+G +L+ E V
Sbjct: 214 IAQGLRLYRPHLASEKV 230
>pdb|1MRO|B Chain B, Methyl-Coenzyme M Reductase
pdb|1MRO|E Chain E, Methyl-Coenzyme M Reductase
pdb|1HBM|B Chain B, Methyl-Coenzyme M Reductase Enzyme Product Complex
pdb|1HBM|E Chain E, Methyl-Coenzyme M Reductase Enzyme Product Complex
pdb|1HBN|B Chain B, Methyl-Coenzyme M Reductase
pdb|1HBN|E Chain E, Methyl-Coenzyme M Reductase
pdb|1HBO|B Chain B, Methyl-Coenzyme M Reductase Mcr-Red1-Silent
pdb|1HBO|E Chain E, Methyl-Coenzyme M Reductase Mcr-Red1-Silent
pdb|1HBU|B Chain B, Methyl-Coenzyme M Reductase In The Mcr-Red1-Silent State
In Complex With Coenzyme M
pdb|1HBU|E Chain E, Methyl-Coenzyme M Reductase In The Mcr-Red1-Silent State
In Complex With Coenzyme M
pdb|3M1V|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M1V|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2R|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2R|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2U|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2U|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2V|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2V|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M30|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M30|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M32|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M32|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
Length = 442
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 845 AGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
A L NT A L++IL EQ+A F V A E +H G+ Y+G++ D L+ D
Sbjct: 201 AATLKNTLQAAALSTIL-----EQTAMFEMGDAVGAFERMHLLGLAYQGMNADNLVFD 253
>pdb|3POT|B Chain B, Structural Analysis Of A Ni(Iii)-Methyl Species In
Methyl-Coenzyme M Reductase From Methanothermobacter
Marburgensis
pdb|3POT|E Chain E, Structural Analysis Of A Ni(Iii)-Methyl Species In
Methyl-Coenzyme M Reductase From Methanothermobacter
Marburgensis
Length = 443
Score = 37.4 bits (85), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 845 AGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
A L NT A L++IL EQ+A F V A E +H G+ Y+G++ D L+ D
Sbjct: 202 AATLKNTLQAAALSTIL-----EQTAMFEMGDAVGAFERMHLLGLAYQGMNADNLVFD 254
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Query: 813 EVQVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHT 863
E + ++E +M ++S V Q+ C + M G LLN L + H
Sbjct: 48 EDEFIEEAKVMMNLSHEKLV-QLYGVCTKQRPIFIITEYMANGCLLNY-----LREMRHR 101
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+Q C V A+E L + L+R ++ +++ G +++ DF + + +
Sbjct: 102 FQTQQLLEMCK-DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 160
Query: 924 FTICGM---ADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAK 979
+ G + PE++ +D WA GVL++ + G+MP+ + SE
Sbjct: 161 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEH 218
Query: 980 IAKGQLSLPQNLSPEAV 996
IA+G +L+ E V
Sbjct: 219 IAQGLRLYRPHLASEKV 235
>pdb|1U12|A Chain A, M. Loti Cyclic Nucleotide Binding Domain Mutant
pdb|1U12|B Chain B, M. Loti Cyclic Nucleotide Binding Domain Mutant
Length = 138
Score = 37.4 bits (85), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+KL + ++ ++ V AG ++ + G GD + V G V + G
Sbjct: 18 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELG--- 74
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ FGE+AL+ +P A+V A T L +L DF+
Sbjct: 75 ---------PGAFFGEMALISGEPRSATVSAATTVSLLSLHSADFQ 111
>pdb|1VP6|A Chain A, M.Loti Ion Channel Cylic Nucleotide Binding Domain
pdb|1VP6|C Chain C, M.Loti Ion Channel Cylic Nucleotide Binding Domain
Length = 138
Score = 37.4 bits (85), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+KL + ++ ++ V AG ++ + G GD + V G V + G
Sbjct: 18 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELG--- 74
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ FGE+AL+ +P A+V A T L +L DF+
Sbjct: 75 ---------PGAFFGEMALISGEPRSATVSAATTVSLLSLHSADFQ 111
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 37.4 bits (85), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Query: 813 EVQVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHT 863
E + ++E +M ++S V Q+ C + M G LLN L + H
Sbjct: 63 EDEFIEEAKVMMNLSHEKLV-QLYGVCTKQRPIFIITEYMANGCLLNY-----LREMRHR 116
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+Q C V A+E L + L+R ++ +++ G +++ DF + + +
Sbjct: 117 FQTQQLLEMCK-DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE 175
Query: 924 FTICGM---ADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAK 979
+ G + PE++ +D WA GVL++ + G+MP+ + SE
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEH 233
Query: 980 IAKGQLSLPQNLSPEAV 996
IA+G +L+ E V
Sbjct: 234 IAQGLRLYRPHLASEKV 250
>pdb|2PQQ|A Chain A, Structural Genomics, The Crystal Structure Of The
N-Terminal Domain Of A Transcriptional Regulator From
Streptomyces Coelicolor A3(2)
pdb|2PQQ|B Chain B, Structural Genomics, The Crystal Structure Of The
N-Terminal Domain Of A Transcriptional Regulator From
Streptomyces Coelicolor A3(2)
pdb|2PQQ|C Chain C, Structural Genomics, The Crystal Structure Of The
N-Terminal Domain Of A Transcriptional Regulator From
Streptomyces Coelicolor A3(2)
pdb|2PQQ|D Chain D, Structural Genomics, The Crystal Structure Of The
N-Terminal Domain Of A Transcriptional Regulator From
Streptomyces Coelicolor A3(2)
Length = 149
Score = 37.4 bits (85), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Query: 469 AHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVM 528
H + L + LF L D Q L V + GD + +G GD YVV G+ ++
Sbjct: 1 GHXDDVLRRNPLFAALDDEQSAELRASXSEVTLARGDTLFHEGDPGDRLYVVTEGKVKLH 60
Query: 529 ATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
T + L +L GEL+L P A+ A+T L AL D +
Sbjct: 61 RTSPDGR---ENXLAVVGPSEL--IGELSLFDPGPRTATGTALTEVKLLALGHGDLQ 112
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 37.4 bits (85), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 75/188 (39%), Gaps = 22/188 (11%)
Query: 837 CTCADSMHAGLLLNTYLACPLASILHTPLD-----EQSARFC-----AASVVAALEDLHK 886
C + H L+ + L ++LH + Q+ +F + + LE L
Sbjct: 76 CQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIP 135
Query: 887 RGVLY-RGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
R L R V D D + + + D +F G R + ++APE +Q K
Sbjct: 136 RHALNSRSVMIDE---DMTARISMADVKFSFQSPG-RMYAPA----WVAPEALQKKPEDT 187
Query: 946 ---AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKL 1002
+AD W+ VL++ ++ E+PF EI + + + ++P +SP L+
Sbjct: 188 NRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKIC 247
Query: 1003 LVVDENTR 1010
+ D R
Sbjct: 248 MNEDPAKR 255
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Query: 813 EVQVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHT 863
E + ++E +M ++S V Q+ C + M G LLN L + H
Sbjct: 63 EDEFIEEAKVMMNLSHEKLV-QLYGVCTKQRPIFIITEYMANGCLLNY-----LREMRHR 116
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+Q C V A+E L + L+R ++ +++ G +++ DF + + +
Sbjct: 117 FQTQQLLEMCK-DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175
Query: 924 FTICGM---ADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAK 979
+ G + PE++ +D WA GVL++ + G+MP+ + SE
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEH 233
Query: 980 IAKGQLSLPQNLSPEAV 996
IA+G +L+ E V
Sbjct: 234 IAQGLRLYRPHLASEKV 250
>pdb|3CO2|A Chain A, Mlotik1 Ion Channel Cyclic-Nucleotide Binding Domain
Mutant
pdb|3CO2|B Chain B, Mlotik1 Ion Channel Cyclic-Nucleotide Binding Domain
Mutant
pdb|3CO2|C Chain C, Mlotik1 Ion Channel Cyclic-Nucleotide Binding Domain
Mutant
pdb|3CO2|D Chain D, Mlotik1 Ion Channel Cyclic-Nucleotide Binding Domain
Mutant
Length = 140
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+KL + ++ ++ V AG ++ + G GD + V G V + G
Sbjct: 20 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELG--- 76
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ FGE+AL+ +P A+V A T L +L DF+
Sbjct: 77 ---------PGAFFGEMALISGEPWSATVSAATTVSLLSLHSADFQ 113
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Query: 813 EVQVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHT 863
E + ++E +M ++S V Q+ C + M G LLN L + H
Sbjct: 54 EDEFIEEAKVMMNLSHEKLV-QLYGVCTKQRPIFIITEYMANGCLLNY-----LREMRHR 107
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+Q C V A+E L + L+R ++ +++ G +++ DF + + +
Sbjct: 108 FQTQQLLEMCK-DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 166
Query: 924 FTICGM---ADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAK 979
+ G + PE++ +D WA GVL++ + G+MP+ + SE
Sbjct: 167 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEH 224
Query: 980 IAKGQLSLPQNLSPEAV 996
IA+G +L+ E V
Sbjct: 225 IAQGLRLYRPHLASEKV 241
>pdb|3E97|A Chain A, Crystal Structure Of Transcriptional Regulator Of CrpFNR
Family (Yp_604437.1) From Deinococcus Geothermalis Dsm
11300 At 1.86 A Resolution
Length = 231
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+ + + L + Q ++VV+Q EG+ ++V +G V+ G
Sbjct: 13 LFQNVPEDAXREALKVVTERNFQPDELVVEQDAEGEALHLVTTG---VVRVSRVSLGGRE 69
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGIL 588
RVL A + GE A++ ++ ASVRA+T L RE F IL
Sbjct: 70 RVLGDIYAPGV--VGETAVLAHQERSASVRALTPVRTLXLHREHFELIL 116
>pdb|3CL1|A Chain A, M. Loti Cyclic-Nucleotide Binding Domain, Cyclic-Gmp Bound
pdb|3CL1|B Chain B, M. Loti Cyclic-Nucleotide Binding Domain, Cyclic-Gmp Bound
Length = 140
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+KL + ++ ++ V AG ++ + G GD + V G V + G
Sbjct: 20 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELG--- 76
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ FGE+AL+ +P A+V A T L +L DF+
Sbjct: 77 ---------PGAFFGEMALISGEPRSATVSAATTVSLLSLHSADFQ 113
>pdb|2K0G|A Chain A, Solution Structure Of A Bacterial Cyclic Nucleotide-
Activated K+ Channel Binding Domain In Complex With Camp
pdb|2KXL|A Chain A, Solution Structure Of A Bacterial Cyclic
Nucleotide-Activated K+ Channel Binding Domain In The
Unliganded State
Length = 142
Score = 37.0 bits (84), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+KL + ++ ++ V AG ++ + G GD + V G V + G
Sbjct: 22 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELG--- 78
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ FGE+AL+ +P A+V A T L +L DF+
Sbjct: 79 ---------PGAFFGEMALISGEPRSATVSAATTVSLLSLHSADFQ 115
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 37.0 bits (84), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD + + ++ L H R VL+R + P L+++++G L+L +F GL+ R F
Sbjct: 98 LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANF----GLA--RAF 151
Query: 925 TI---CGMAD-----YLAPEIVQG-KGHGLAADWWALGVLI 956
I C A+ Y P+++ G K + + D W+ G +
Sbjct: 152 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF 192
>pdb|3CLP|A Chain A, M. Loti Cyclic-Nucleotide Binding Domain Mutant 2
pdb|3CLP|C Chain C, M. Loti Cyclic-Nucleotide Binding Domain Mutant 2
Length = 140
Score = 36.6 bits (83), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+KL + ++ ++ V AG ++ + G GD + V G V + G
Sbjct: 20 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELG--- 76
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ FGE+AL+ +P A+V A T L +L DF+
Sbjct: 77 ---------PGAFFGEMALISGEPESATVSAATTVSLLSLHSADFQ 113
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 36.6 bits (83), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Query: 813 EVQVLKEKNLMKSVSPSACVPQILCTCA---------DSMHAGLLLNTYLACPLASILHT 863
E + ++E +M ++S V Q+ C + M G LLN L + H
Sbjct: 48 EDEFIEEAKVMMNLSHEKLV-QLYGVCTKQRPIFIITEYMANGCLLNY-----LREMRHR 101
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
+Q C V A+E L + L+R ++ +++ G +++ DF + + +
Sbjct: 102 FQTQQLLEMCK-DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 160
Query: 924 FTICGM---ADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAK 979
+ G + PE++ +D WA GVL++ + G+MP+ + SE
Sbjct: 161 TSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEH 218
Query: 980 IAKGQLSLPQNLSPEAV 996
IA+G +L+ E V
Sbjct: 219 IAQGLRLYRPHLASEKV 235
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 880 ALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFT-ICGMADYLAPEIV 938
L+ LH +++R + P+ +++ G ++L DF + S + Y APE++
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVL 183
Query: 939 QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
+ D W++G + M + + F SE D + KI
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKPLFCG--NSEADQLGKI 223
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/169 (18%), Positives = 70/169 (41%), Gaps = 18/169 (10%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILH---TPLDEQSAR 871
Q+ E K ++ +P + + +H L+++ L L +L ++
Sbjct: 50 QLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL-LGPSLEDLLDLCGRKFSVKTVA 108
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-----SGHLQLVDFRFGK---------G 917
A ++A ++ +H++ ++YR + PD ++ + + + +VDF K
Sbjct: 109 MAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH 168
Query: 918 LSGNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ + G A Y++ G+ D ALG + + L+G +P+
Sbjct: 169 IPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 217
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 880 ALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF-TICGMADYLAPEIV 938
L+ LH +++R + P+ +++ G ++L DF + S + Y APE++
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVL 183
Query: 939 QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
+ D W++G + M + + F SE D + KI
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKPLFCG--NSEADQLGKI 223
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/170 (18%), Positives = 70/170 (41%), Gaps = 20/170 (11%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP----LASILHTPLDEQSA 870
Q+ E K ++ +P + + +H L+++ L P L + ++
Sbjct: 51 QLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID--LLGPSLEDLLDLCGRKFSVKTV 108
Query: 871 RFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-----SGHLQLVDFRFGK--------- 916
A ++A ++ +H++ ++YR + PD ++ + + + +VDF K
Sbjct: 109 AMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ 168
Query: 917 GLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ + G A Y++ G+ D ALG + + L+G +P+
Sbjct: 169 HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 218
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + + G A +
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 216
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 275
Query: 991 LSPE 994
+PE
Sbjct: 276 TTPE 279
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + + G A +
Sbjct: 207 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 266
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 267 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 325
Query: 991 LSPE 994
+PE
Sbjct: 326 TTPE 329
>pdb|3BEH|A Chain A, Structure Of A Bacterial Cyclic Nucleotide Regulated Ion
Channel
pdb|3BEH|B Chain B, Structure Of A Bacterial Cyclic Nucleotide Regulated Ion
Channel
pdb|3BEH|C Chain C, Structure Of A Bacterial Cyclic Nucleotide Regulated Ion
Channel
pdb|3BEH|D Chain D, Structure Of A Bacterial Cyclic Nucleotide Regulated Ion
Channel
pdb|2ZD9|A Chain A, Structure Of A Bacterial Cyclic-Nucleotide Regulated Ion
Channel
pdb|2ZD9|B Chain B, Structure Of A Bacterial Cyclic-Nucleotide Regulated Ion
Channel
pdb|2ZD9|C Chain C, Structure Of A Bacterial Cyclic-Nucleotide Regulated Ion
Channel
pdb|2ZD9|D Chain D, Structure Of A Bacterial Cyclic-Nucleotide Regulated Ion
Channel
Length = 355
Score = 35.4 bits (80), Expect = 0.17, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+KL + ++ ++ V AG ++ + G GD + V G V + G P
Sbjct: 235 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELG--P 292
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
FGE+AL+ +P A+V A T L +L DF+
Sbjct: 293 GAF----------FGEMALISGEPRSATVSAATTVSLLSLHSADFQ 328
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + + G A +
Sbjct: 159 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 218
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 219 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 277
Query: 991 LSPE 994
+PE
Sbjct: 278 TTPE 281
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + + G A +
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 207
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 208 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 266
Query: 991 LSPE 994
+PE
Sbjct: 267 TTPE 270
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + + G A +
Sbjct: 209 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 268
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 269 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 327
Query: 991 LSPE 994
+PE
Sbjct: 328 TTPE 331
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + + G A +
Sbjct: 200 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 259
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 260 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 318
Query: 991 LSPE 994
+PE
Sbjct: 319 TTPE 322
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + + G A +
Sbjct: 202 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 261
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 262 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 320
Query: 991 LSPE 994
+PE
Sbjct: 321 TTPE 324
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + + G A +
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 207
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 208 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 266
Query: 991 LSPE 994
+PE
Sbjct: 267 TTPE 270
>pdb|3ETQ|A Chain A, X-Ray Structure Of Cysteine-Free Fragment Of Mhcn2 C-
Terminal Region From Amino Acids 443-630 Including
C508n, C584s, And C601s Mutations
pdb|3ETQ|B Chain B, X-Ray Structure Of Cysteine-Free Fragment Of Mhcn2 C-
Terminal Region From Amino Acids 443-630 Including
C508n, C584s, And C601s Mutations
Length = 204
Score = 35.0 bits (79), Expect = 0.20, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 17/112 (15%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS---FGELAL 558
Q GD ++++G G Y + G V++ + N E+ KLS FGE++L
Sbjct: 103 QPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKEM----------KLSDGSYFGEISL 149
Query: 559 MYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRL 610
+ ASVRA T L++L ++F +L E+ + ++D L R+
Sbjct: 150 LTRGRRTASVRADTYSRLYSLSVDNFNEVL-EEYPMMRRAFETVAIDRLDRI 200
Score = 30.4 bits (67), Expect = 5.6, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 28/130 (21%)
Query: 583 DFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAA 642
+ G L E N ++ KL+ S+ L + ++ + L F G I+
Sbjct: 58 ELNGPLREEIVNFNNRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKK 117
Query: 643 LYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLL- 701
+Y IQ G V + T+ +KE+ + S+GSYFGE +LL
Sbjct: 118 MYFIQHGVVSVL------------------------TKGNKEMKL--SDGSYFGEISLLT 151
Query: 702 -GEHMGSLTA 710
G S+ A
Sbjct: 152 RGRRTASVRA 161
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 99/253 (39%), Gaps = 65/253 (25%)
Query: 812 KEVQVLKEKNLMKSVSPSACVPQILCTCADSMH----------AGLLLNTYLACPLASIL 861
K +Q+LK +N++ + C S++ AGLL N + L+ I
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI- 127
Query: 862 HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-- 919
+ ++ L +H+ +L+R + +++ + G L+L DF + S
Sbjct: 128 ---------KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLA 178
Query: 920 --------GNRTFTICGMADYLAPEIVQG-KGHGLAADWWALGVLIYFM-LQGEMPFGSW 969
NR T+ Y PE++ G + +G D W G ++ M + + G+
Sbjct: 179 KNSQPNRYXNRVVTLW----YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
Query: 970 RESEIDIVAK-----------------------IAKGQLSLPQN------LSPEAVDLLT 1000
+ ++ ++++ + KGQ ++ P A+DL+
Sbjct: 235 EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID 294
Query: 1001 KLLVVDENTRLGS 1013
KLLV+D R+ S
Sbjct: 295 KLLVLDPAQRIDS 307
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 82/208 (39%), Gaps = 15/208 (7%)
Query: 815 QVLKEKNLMKSVSPSACVPQI-LCTCADSMHAGLLLNTYLACPLASILHTP--LDEQSAR 871
++L E N+M+ + V I +C M L++ PL L + +++
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGICEAESWM---LVMEMAELGPLNKYLQQNRHVKDKNII 472
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGM-- 929
V ++ L + ++R ++ ++L + ++ DF K L + +
Sbjct: 473 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 532
Query: 930 ---ADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKGQ- 984
+ APE + +D W+ GVL++ G+ P+ + SE + A + KG+
Sbjct: 533 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGER 590
Query: 985 LSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
+ P E DL+ D R G
Sbjct: 591 MGCPAGCPREMYDLMNLCWTYDVENRPG 618
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 82/208 (39%), Gaps = 15/208 (7%)
Query: 815 QVLKEKNLMKSVSPSACVPQI-LCTCADSMHAGLLLNTYLACPLASILHTP--LDEQSAR 871
++L E N+M+ + V I +C M L++ PL L + +++
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICEAESWM---LVMEMAELGPLNKYLQQNRHVKDKNII 473
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGM-- 929
V ++ L + ++R ++ ++L + ++ DF K L + +
Sbjct: 474 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 533
Query: 930 ---ADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKGQ- 984
+ APE + +D W+ GVL++ G+ P+ + SE + A + KG+
Sbjct: 534 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGER 591
Query: 985 LSLPQNLSPEAVDLLTKLLVVDENTRLG 1012
+ P E DL+ D R G
Sbjct: 592 MGCPAGCPREMYDLMNLCWTYDVENRPG 619
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 99/253 (39%), Gaps = 65/253 (25%)
Query: 812 KEVQVLKEKNLMKSVSPSACVPQILCTCADSMH----------AGLLLNTYLACPLASIL 861
K +Q+LK +N++ + C S++ AGLL N + L+ I
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEI- 127
Query: 862 HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-- 919
+ ++ L +H+ +L+R + +++ + G L+L DF + S
Sbjct: 128 ---------KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLA 178
Query: 920 --------GNRTFTICGMADYLAPEIVQG-KGHGLAADWWALGVLIYFM-LQGEMPFGSW 969
NR T+ Y PE++ G + +G D W G ++ M + + G+
Sbjct: 179 KNSQPNRYXNRVVTLW----YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
Query: 970 RESEIDIVAK-----------------------IAKGQLSLPQN------LSPEAVDLLT 1000
+ ++ ++++ + KGQ ++ P A+DL+
Sbjct: 235 EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID 294
Query: 1001 KLLVVDENTRLGS 1013
KLLV+D R+ S
Sbjct: 295 KLLVLDPAQRIDS 307
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 69/176 (39%), Gaps = 22/176 (12%)
Query: 837 CTCADSMHAGLLLNTYLACPLASILHTPLD-----EQSARFC-----AASVVAALEDLHK 886
C + H L+ + L ++LH + Q+ +F + + LE L
Sbjct: 76 CQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIP 135
Query: 887 RGVLY-RGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGL 945
R L R V D D + + D +F G R + ++APE +Q K
Sbjct: 136 RHALNSRSVXIDE---DXTARISXADVKFSFQSPG-RXYAPA----WVAPEALQKKPEDT 187
Query: 946 ---AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDL 998
+AD W+ VL++ ++ E+PF EI + + ++P +SP L
Sbjct: 188 NRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGISPHVSKL 243
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + + G A +
Sbjct: 194 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 253
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 254 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 312
Query: 991 LSPE 994
+PE
Sbjct: 313 TTPE 316
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + + G A +
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 212
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 213 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 271
Query: 991 LSPE 994
+PE
Sbjct: 272 TTPE 275
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 17/110 (15%)
Query: 876 SVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN-------------- 921
+ A+E LH +G+++R + P + +++ DF + +
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 922 RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRE 971
R G Y++PE + G + D ++LG++++ +L PF + E
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQME 232
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + + G A +
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKW 212
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 213 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFXRRLKEGTRMRAPDY 271
Query: 991 LSPE 994
+PE
Sbjct: 272 TTPE 275
>pdb|3OTF|A Chain A, Structural Basis For The Camp-Dependent Gating In Human
Hcn4 Channel
Length = 220
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 498 RVEV-QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGEL 556
R EV Q GD ++++G G Y + G V++ + N E Y FGE+
Sbjct: 93 RFEVFQPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKETKLADGSY-------FGEI 142
Query: 557 ALMYNKPLQASVRAVTNGMLWALKREDFRGIL 588
L+ ASVRA T L++L ++F +L
Sbjct: 143 CLLTRGRRTASVRADTYCRLYSLSVDNFNEVL 174
>pdb|3U11|A Chain A, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
pdb|3U11|B Chain B, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
Length = 210
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 498 RVEV-QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKL---SSF 553
R EV Q GD ++++G G Y + G V++ + N E KL S F
Sbjct: 99 RFEVFQPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKET----------KLADGSYF 145
Query: 554 GELALMYNKPLQASVRAVTNGMLWALKREDFRGIL 588
GE+ L+ ASVRA T L++L ++F +L
Sbjct: 146 GEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVL 180
>pdb|3U0Z|A Chain A, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
pdb|3U0Z|B Chain B, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
Length = 210
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 498 RVEV-QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAE-KL---SS 552
R EV Q GD ++++G G Y + G V V+ + + E KL S
Sbjct: 99 RFEVFQPGDYIIREGAVGKKMYFIQHG--------------VAGVITKSSKEMKLTDGSY 144
Query: 553 FGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRL 610
FGE+ L+ ASVRA T L++L ++F +L E+ + ++D L R+
Sbjct: 145 FGEICLLTKGRRTASVRADTYCRLYSLSVDNFNEVL-EEYPMMRRAFETVAIDRLDRI 201
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 34.3 bits (77), Expect = 0.43, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 9/143 (6%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGM-----AD 931
V ++ L + ++R ++ ++L + ++ DF K L + +
Sbjct: 134 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 193
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKGQ-LSLPQ 989
+ APE + +D W+ GVL++ G+ P+ + SE + A + KG+ + P
Sbjct: 194 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGERMGCPA 251
Query: 990 NLSPEAVDLLTKLLVVDENTRLG 1012
E DL+ D R G
Sbjct: 252 GCPREMYDLMNLCWTYDVENRPG 274
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 34.3 bits (77), Expect = 0.43, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 9/143 (6%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGM-----AD 931
V ++ L + ++R ++ ++L + ++ DF K L + +
Sbjct: 114 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 173
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKGQ-LSLPQ 989
+ APE + +D W+ GVL++ G+ P+ + SE + A + KG+ + P
Sbjct: 174 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGERMGCPA 231
Query: 990 NLSPEAVDLLTKLLVVDENTRLG 1012
E DL+ D R G
Sbjct: 232 GCPREMYDLMNLCWTYDVENRPG 254
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 34.3 bits (77), Expect = 0.43, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 9/143 (6%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGM-----AD 931
V ++ L + ++R ++ ++L + ++ DF K L + +
Sbjct: 126 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 185
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKGQ-LSLPQ 989
+ APE + +D W+ GVL++ G+ P+ + SE + A + KG+ + P
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGERMGCPA 243
Query: 990 NLSPEAVDLLTKLLVVDENTRLG 1012
E DL+ D R G
Sbjct: 244 GCPREMYDLMNLCWTYDVENRPG 266
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 34.3 bits (77), Expect = 0.43, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 9/143 (6%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGM-----AD 931
V ++ L + ++R ++ ++L + ++ DF K L + +
Sbjct: 116 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 175
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKGQ-LSLPQ 989
+ APE + +D W+ GVL++ G+ P+ + SE + A + KG+ + P
Sbjct: 176 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGERMGCPA 233
Query: 990 NLSPEAVDLLTKLLVVDENTRLG 1012
E DL+ D R G
Sbjct: 234 GCPREMYDLMNLCWTYDVENRPG 256
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.3 bits (77), Expect = 0.43, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 9/143 (6%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGM-----AD 931
V ++ L + ++R ++ ++L + ++ DF K L + +
Sbjct: 120 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 179
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKGQ-LSLPQ 989
+ APE + +D W+ GVL++ G+ P+ + SE + A + KG+ + P
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGERMGCPA 237
Query: 990 NLSPEAVDLLTKLLVVDENTRLG 1012
E DL+ D R G
Sbjct: 238 GCPREMYDLMNLCWTYDVENRPG 260
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN-RT 923
LD+ A + ++ +H + ++ R + P + L + +++ DF L + +
Sbjct: 119 LDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 924 FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ 961
G Y++PE + + +G D +ALG+++ +L
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH 216
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 33.9 bits (76), Expect = 0.47, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 9/143 (6%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGM-----AD 931
V ++ L + ++R ++ ++L + ++ DF K L + +
Sbjct: 136 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKGQ-LSLPQ 989
+ APE + +D W+ GVL++ G+ P+ + SE + A + KG+ + P
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGERMGCPA 253
Query: 990 NLSPEAVDLLTKLLVVDENTRLG 1012
E DL+ D R G
Sbjct: 254 GCPREMYDLMNLCWTYDVENRPG 276
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 33.9 bits (76), Expect = 0.47, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 9/143 (6%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGM-----AD 931
V ++ L + ++R ++ ++L + ++ DF K L + +
Sbjct: 136 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKGQ-LSLPQ 989
+ APE + +D W+ GVL++ G+ P+ + SE + A + KG+ + P
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGERMGCPA 253
Query: 990 NLSPEAVDLLTKLLVVDENTRLG 1012
E DL+ D R G
Sbjct: 254 GCPREMYDLMNLCWTYDVENRPG 276
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 33.9 bits (76), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 10/130 (7%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--RTFTICGMA---D 931
V A + L G ++R ++ +++D + ++ DF + L + +T G
Sbjct: 160 VGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR 219
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKGQLSLPQN 990
+ APE + + A+D W+ GV+++ +L GE P+ W + D+++ + +G LP
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY--WNMTNRDVISSVEEG-YRLPAP 276
Query: 991 LS-PEAVDLL 999
+ P A+ L
Sbjct: 277 MGCPHALHQL 286
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + G A +
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKW 216
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 275
Query: 991 LSPE 994
+PE
Sbjct: 276 TTPE 279
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 33.9 bits (76), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 874 AASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGL-SGNRTFTICGMAD- 931
A + + LH + ++R ++ ++LD +++ DF K + G+ + + D
Sbjct: 123 AQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 182
Query: 932 ---YLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+ APE ++ A+D W+ GV +Y +L S ++++ IA+GQ+++
Sbjct: 183 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG-IAQGQMTV 240
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 33.9 bits (76), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 876 SVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--RTFTICGM---A 930
+ A + L G ++R ++ ++++ + ++ DF + + + +T G
Sbjct: 153 GIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPV 212
Query: 931 DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKG 983
+ APE +Q + A+D W+ G++++ M GE P+ W S D++ I +G
Sbjct: 213 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY--WDMSNQDVIKAIEEG 264
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + G A +
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKW 216
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 275
Query: 991 LSPE 994
+PE
Sbjct: 276 TTPE 279
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 33.9 bits (76), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 874 AASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGL-SGNRTFTICGMAD- 931
A + + LH + ++R ++ ++LD +++ DF K + G+ + + D
Sbjct: 123 AQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 182
Query: 932 ---YLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+ APE ++ A+D W+ GV +Y +L S ++++ IA+GQ+++
Sbjct: 183 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG-IAQGQMTV 240
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 64 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 122
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 123 RNETHNPTVKDLIGF-GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 181
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ +++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 182 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 239
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 240 VNTFDITVYLLQGRRLLQPEYCPDPL 265
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 874 AASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGL-SGNRTFTICGMAD- 931
A + + LH + ++R ++ ++LD +++ DF K + G+ + + D
Sbjct: 118 AQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 177
Query: 932 ---YLAPEIVQGKGHGLAADWWALGVLIYFML 960
+ APE ++ A+D W+ GV +Y +L
Sbjct: 178 PVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 27/153 (17%)
Query: 880 ALEDLHKRG--VLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMAD------ 931
A++ +H++ +++R + + L+L G ++L DF +S ++
Sbjct: 148 AVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEE 207
Query: 932 --------YLAPEIVQGKGH---GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKI 980
Y PEI+ + G D WALG ++Y + + PF E +I
Sbjct: 208 ITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF------EDGAKLRI 261
Query: 981 AKGQLSLPQNLSPEAV--DLLTKLLVVDENTRL 1011
G+ S+P + + V L+ +L V+ RL
Sbjct: 262 VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERL 294
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 874 AASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGL-SGNRTFTICGMAD- 931
A + + LH + ++R ++ ++LD +++ DF K + G+ + + D
Sbjct: 117 AQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 176
Query: 932 ---YLAPEIVQGKGHGLAADWWALGVLIYFML 960
+ APE ++ A+D W+ GV +Y +L
Sbjct: 177 PVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|3U10|A Chain A, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
Length = 210
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS---FGELAL 558
Q GD ++++G G Y + G V++ + N E+ KLS FGE+ L
Sbjct: 104 QPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKEM----------KLSDGSYFGEICL 150
Query: 559 MYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRL 610
+ ASVRA T L++L ++F +L E+ + ++D L R+
Sbjct: 151 LTRGRRTASVRADTYCRLYSLSVDNFNEVL-EEYPMMRRAFETVAIDRLDRI 201
Score = 33.1 bits (74), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 583 DFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAA 642
+ G L E N + KL+ S+ L + ++ + L F G I+
Sbjct: 59 ELNGPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKK 118
Query: 643 LYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLG 702
+Y IQ G V + T+ +KE+ + S+GSYFGE LL
Sbjct: 119 MYFIQHGVVSVL------------------------TKGNKEMKL--SDGSYFGEICLLT 152
Query: 703 EHMGSLTAVAVDDVVCAILT 722
G TA D C + +
Sbjct: 153 R--GRRTASVRADTYCRLYS 170
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 65 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 123
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 124 RNETHNPTVKDLIGF-GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 182
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ +++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 183 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 240
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 241 VNTFDITVYLLQGRRLLQPEYCPDPL 266
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + G A +
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKW 207
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 208 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 266
Query: 991 LSPE 994
+PE
Sbjct: 267 TTPE 270
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/196 (18%), Positives = 85/196 (43%), Gaps = 20/196 (10%)
Query: 817 LKEKNLMKSVSPSACV--------PQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQ 868
L+E NLMK++ V + + + M G LL+ + +L L +
Sbjct: 56 LEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF 115
Query: 869 SARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICG 928
SA+ + + + ++ ++R + +++ +S ++ DF + + N G
Sbjct: 116 SAQ-----IAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG 170
Query: 929 MA---DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKG- 983
+ APE + + +D W+ G+L+Y + G++P+ + D++ +++G
Sbjct: 171 AKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPG--RTNADVMTALSQGY 228
Query: 984 QLSLPQNLSPEAVDLL 999
++ +N E D++
Sbjct: 229 RMPRVENCPDELYDIM 244
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + G A +
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKW 207
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 208 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 266
Query: 991 LSPE 994
+PE
Sbjct: 267 TTPE 270
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 33.5 bits (75), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 21/251 (8%)
Query: 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQV---LKEKNLMKSV 826
+M+ K L + E G V+L D R +K VKC+ + L E ++M +
Sbjct: 19 NMKELKLLQTIGKGEFGDVMLGDY-------RGNKVAVKCIKNDATAQAFLAEASVMTQL 71
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACP-----LASILHTPLDEQSARFCAASVVAAL 881
S V Q+L + ++ Y+A L S + L + V A+
Sbjct: 72 RHSNLV-QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 130
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
E L ++R ++ +++ + ++ DF K S + T + APE ++ K
Sbjct: 131 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKWTAPEALREK 189
Query: 942 GHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQNLSPEAVDLL 999
+D W+ G+L++ + G +P+ R D+V ++ KG ++ P P +++
Sbjct: 190 KFSTKSDVWSFGILLWEIYSFGRVPYP--RIPLKDVVPRVEKGYKMDAPDGCPPAVYEVM 247
Query: 1000 TKLLVVDENTR 1010
+D R
Sbjct: 248 KNCWHLDAAMR 258
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 33.5 bits (75), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 878 VAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDF----RFGKGLSGNRTFTICGMADYL 933
+ L+D HK + +R + ++L + + DF +F G S T G Y+
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 934 APEIVQG-----KGHGLAADWWALGVLIY 957
APE+++G + L D +A+G++++
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLW 229
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 33.5 bits (75), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 21/251 (8%)
Query: 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQV---LKEKNLMKSV 826
+M+ K L + E G V+L D R +K VKC+ + L E ++M +
Sbjct: 4 NMKELKLLQTIGKGEFGDVMLGDY-------RGNKVAVKCIKNDATAQAFLAEASVMTQL 56
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACP-----LASILHTPLDEQSARFCAASVVAAL 881
S V Q+L + ++ Y+A L S + L + V A+
Sbjct: 57 RHSNLV-QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 115
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
E L ++R ++ +++ + ++ DF K S + T + APE ++ K
Sbjct: 116 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKWTAPEALREK 174
Query: 942 GHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQNLSPEAVDLL 999
+D W+ G+L++ + G +P+ R D+V ++ KG ++ P P +++
Sbjct: 175 KFSTKSDVWSFGILLWEIYSFGRVPYP--RIPLKDVVPRVEKGYKMDAPDGCPPAVYEVM 232
Query: 1000 TKLLVVDENTR 1010
+D R
Sbjct: 233 KNCWHLDAAMR 243
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 33.5 bits (75), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + G A +
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKW 216
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 275
Query: 991 LSPE 994
+PE
Sbjct: 276 TTPE 279
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 33.5 bits (75), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 65 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 123
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 124 RNETHNPTVKDLIGF-GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 182
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ +++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 183 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 240
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 241 VNTFDITVYLLQGRRLLQPEYCPDPL 266
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 33.5 bits (75), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 57/110 (51%), Gaps = 15/110 (13%)
Query: 895 SPDVLM--LDKSGHL--QLVDFRFGKGLSGNRTFTICGMA---DYLAPEIV--QGKGHGL 945
SP++ + LD++ + ++ DF GLS ++ G+ ++APE + + + +
Sbjct: 152 SPNIFLQSLDENAPVCAKVADF----GLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTE 207
Query: 946 AADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQL--SLPQNLSP 993
AD ++ +++Y +L GE PF + +I + I + L ++P++ P
Sbjct: 208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPP 257
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 33.5 bits (75), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 63 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 121
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 122 RNETHNPTVKDLIGF-GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 180
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ +++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 181 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 238
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 239 VNTFDITVYLLQGRRLLQPEYCPDPL 264
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 33.5 bits (75), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 60 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 118
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 119 RNETHNPTVKDLIGF-GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 177
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ +++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 235
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 236 VNTFDITVYLLQGRRLLQPEYCPDPL 261
>pdb|1Q3E|A Chain A, Hcn2j 443-645 In The Presence Of Cgmp
pdb|1Q3E|B Chain B, Hcn2j 443-645 In The Presence Of Cgmp
Length = 207
Score = 33.5 bits (75), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 16/90 (17%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS---FGELAL 558
Q GD ++++G G Y + G V++ + N E+ KLS FGE+ L
Sbjct: 101 QPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKEM----------KLSDGSYFGEICL 147
Query: 559 MYNKPLQASVRAVTNGMLWALKREDFRGIL 588
+ ASVRA T L++L ++F +L
Sbjct: 148 LTRGRRTASVRADTYCRLYSLSVDNFNEVL 177
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 583 DFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAA 642
+ G L E N + KL+ S+ L + ++ + L F G I+
Sbjct: 56 ELNGPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKK 115
Query: 643 LYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLG 702
+Y IQ G V + T+ +KE+ + S+GSYFGE LL
Sbjct: 116 MYFIQHGVVSVL------------------------TKGNKEMKL--SDGSYFGEICLLT 149
Query: 703 EHMGSLTAVAVDDVVCAILT 722
G TA D C + +
Sbjct: 150 R--GRRTASVRADTYCRLYS 167
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 33.5 bits (75), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/171 (18%), Positives = 68/171 (39%), Gaps = 18/171 (10%)
Query: 812 KEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP----LASILHTPLDE 867
K Q+L E + + + +P + + + L+++ L P L + L
Sbjct: 45 KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD--LLGPSLEDLFNFCSRKLSL 102
Query: 868 QSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGKGLSGNRTF 924
++ A ++ +E +H + L+R + PD ++ ++ + ++DF K T
Sbjct: 103 KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162
Query: 925 ---------TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF 966
+ G A Y + G D +LG ++ + L+G +P+
Sbjct: 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 213
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 33.5 bits (75), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 84 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 142
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 143 RNETHNPTVKDLIGF-GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 201
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ +++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 202 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 259
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 260 VNTFDITVYLLQGRRLLQPEYCPDPL 285
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 62 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 120
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 121 RNETHNPTVKDLIGF-GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 179
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ +++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 180 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 237
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 238 VNTFDITVYLLQGRRLLQPEYCPDPL 263
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 57 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 115
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 116 RNETHNPTVKDLIGF-GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 174
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ +++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 175 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 232
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 233 VNTFDITVYLLQGRRLLQPEYCPDPL 258
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 33.1 bits (74), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 83 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 141
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 142 RNETHNPTVKDLIGF-GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 200
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ +++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 201 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 258
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 259 VNTFDITVYLLQGRRLLQPEYCPDPL 284
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD ++ + +E L R ++R ++ ++++ H+++ DF K L ++ +
Sbjct: 111 LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 170
Query: 925 TIC---GMAD--YLAPEIVQGKGHGLAADWWALGVLIY 957
+ G + + APE + +D W+ GV++Y
Sbjct: 171 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 208
>pdb|2Q0A|A Chain A, Structure And Rearrangements In The Carboxy-Terminal
Region Of Spih Channels
pdb|2Q0A|B Chain B, Structure And Rearrangements In The Carboxy-Terminal
Region Of Spih Channels
Length = 200
Score = 33.1 bits (74), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 16/90 (17%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS---FGELAL 558
Q GD ++++G G Y + G V++ + N E+ KLS FGE+ L
Sbjct: 99 QPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKEM----------KLSDGSYFGEICL 145
Query: 559 MYNKPLQASVRAVTNGMLWALKREDFRGIL 588
+ ASVRA T L++L ++F +L
Sbjct: 146 LTRGRRTASVRADTYCRLYSLSVDNFNEVL 175
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 583 DFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAA 642
+ G L E N + KL+ S+ L + ++ + L F G I+
Sbjct: 54 ELNGPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKK 113
Query: 643 LYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLG 702
+Y IQ G V + T+ +KE+ + S+GSYFGE LL
Sbjct: 114 MYFIQHGVVSVL------------------------TKGNKEMKL--SDGSYFGEICLLT 147
Query: 703 EHMGSLTAVAVDDVVCAILT 722
G TA D C + +
Sbjct: 148 R--GRRTASVRADTYCRLYS 165
>pdb|3BPZ|A Chain A, Hcn2-I 443-460 E502k In The Presence Of Camp
pdb|3BPZ|B Chain B, Hcn2-I 443-460 E502k In The Presence Of Camp
pdb|3BPZ|C Chain C, Hcn2-I 443-460 E502k In The Presence Of Camp
pdb|3BPZ|D Chain D, Hcn2-I 443-460 E502k In The Presence Of Camp
Length = 202
Score = 33.1 bits (74), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 16/90 (17%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS---FGELAL 558
Q GD ++++G G Y + G V++ + N E+ KLS FGE+ L
Sbjct: 101 QPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKEM----------KLSDGSYFGEICL 147
Query: 559 MYNKPLQASVRAVTNGMLWALKREDFRGIL 588
+ ASVRA T L++L ++F +L
Sbjct: 148 LTRGRRTASVRADTYCRLYSLSVDNFNEVL 177
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 583 DFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAA 642
+ G L + N + KL+ S+ L + ++ + L F G I+
Sbjct: 56 ELNGPLREKIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKK 115
Query: 643 LYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLG 702
+Y IQ G V + T+ +KE+ + S+GSYFGE LL
Sbjct: 116 MYFIQHGVVSVL------------------------TKGNKEMKL--SDGSYFGEICLLT 149
Query: 703 EHMGSLTAVAVDDVVCAILT 722
G TA D C + +
Sbjct: 150 R--GRRTASVRADTYCRLYS 167
>pdb|3FFQ|A Chain A, Hcn2i 443-640 Apo-State
pdb|3FFQ|B Chain B, Hcn2i 443-640 Apo-State
Length = 202
Score = 33.1 bits (74), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS---FGELAL 558
Q GD ++++G G Y + G V++ + N E+ KLS FGE+ L
Sbjct: 101 QPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKEM----------KLSDGSYFGEICL 147
Query: 559 MYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRL 610
+ ASVRA T L++L ++F +L E+ + ++D L R+
Sbjct: 148 LTRGRRTASVRADTYCRLYSLSVDNFNEVL-EEYPMMRRAFETVAIDRLDRI 198
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 583 DFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAA 642
+ G L E N + KL+ S+ L + ++ + L F G I+
Sbjct: 56 ELNGPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKK 115
Query: 643 LYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLG 702
+Y IQ G V + T+ +KE+ + S+GSYFGE LL
Sbjct: 116 MYFIQHGVVSVL------------------------TKGNKEMKL--SDGSYFGEICLLT 149
Query: 703 EHMGSLTAVAVDDVVCAILT 722
G TA D C + +
Sbjct: 150 R--GRRTASVRADTYCRLYS 167
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 33.1 bits (74), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA----DY 932
V +E L R ++R ++ ++L + +++ DF + + + G A +
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKW 216
Query: 933 LAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQN 990
+APE + + + + +D W+ GVL++ + G P+ + E + ++ +G ++ P
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDY 275
Query: 991 LSPE 994
+PE
Sbjct: 276 TTPE 279
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 33.1 bits (74), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/98 (18%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTIC--------- 927
+ A+E LH +G+++R + P + +++ DF + +
Sbjct: 173 IAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAT 232
Query: 928 -----GMADYLAPEIVQGKGHGLAADWWALGVLIYFML 960
G Y++PE + G + D ++LG++++ +L
Sbjct: 233 HXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 33.1 bits (74), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD ++ + +E L R ++R ++ ++++ H+++ DF K L ++ +
Sbjct: 112 LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 171
Query: 925 TIC---GMAD--YLAPEIVQGKGHGLAADWWALGVLIY 957
+ G + + APE + +D W+ GV++Y
Sbjct: 172 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 209
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD ++ + +E L R ++R ++ ++++ H+++ DF K L ++ +
Sbjct: 124 LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 183
Query: 925 TIC---GMAD--YLAPEIVQGKGHGLAADWWALGVLIY 957
+ G + + APE + +D W+ GV++Y
Sbjct: 184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 221
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPE 936
++ AL LH G++Y + P+ +ML + L+L+D G N + G + APE
Sbjct: 191 ILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLID--LGAVSRINSFGYLYGTPGFQAPE 247
Query: 937 IVQGKGHGLAADWWALG 953
IV+ G +A D + +G
Sbjct: 248 IVR-TGPTVATDIYTVG 263
>pdb|2Z69|A Chain A, Crystal Structure Of The Sensor Domain Of The
Transcriptional Regulator Dnr From Pseudomonas
Aeruginosa
pdb|2Z69|B Chain B, Crystal Structure Of The Sensor Domain Of The
Transcriptional Regulator Dnr From Pseudomonas
Aeruginosa
pdb|2Z69|C Chain C, Crystal Structure Of The Sensor Domain Of The
Transcriptional Regulator Dnr From Pseudomonas
Aeruginosa
Length = 154
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 472 ERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQ 531
++ L H LF L+ Q LL V + G V +QG FY + SG ++
Sbjct: 11 QQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLT 70
Query: 532 EEKNGEVPRVLQRYTAEKLSSFGELALMYNKP-LQASVRAVTNGMLWALKREDF 584
E ++ V T E+ ++F E + + P A+ +AV L+ + +
Sbjct: 71 PEGQEKILEV----TNER-NTFAEAMMFMDTPNYVATAQAVVPSQLFRFSNKAY 119
>pdb|3AGR|A Chain A, Crystal Structure Of Nucleoside Triphosphate Hydrolases
From Neospora Caninum
pdb|3AGR|B Chain B, Crystal Structure Of Nucleoside Triphosphate Hydrolases
From Neospora Caninum
Length = 602
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 17/132 (12%)
Query: 515 DCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS-FGELALMYNKPLQASVRAVTN 573
DCF +VG+G+F+ Q E+ PR E SS F + ++ AS +T
Sbjct: 408 DCFQIVGTGDFDTCQAQVEELLVSPRFPLPANIEAASSGFESVGQVFKFASTASPMVITG 467
Query: 574 GMLWA---------LKREDFRG---ILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADT 621
G ++A L +DF+G L++ S ++ + D L ++QL +
Sbjct: 468 GAMYASISTMQGLGLLPKDFQGDLEQLIAASRTYCSSPVVNNGDGL----VIQLPNAEQK 523
Query: 622 LSEVSFSAGQTI 633
L+ +++ +TI
Sbjct: 524 LTSMNYDLCKTI 535
>pdb|4HBN|A Chain A, Crystal Structure Of The Human Hcn4 Channel C-terminus
Carrying The S672r Mutation
Length = 205
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 17/95 (17%)
Query: 498 RVEV-QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKL---SSF 553
R EV Q GD ++++G G Y + G V++ + N E KL S F
Sbjct: 93 RFEVFQPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKET----------KLADGSYF 139
Query: 554 GELALMYNKPLQASVRAVTNGMLWALKREDFRGIL 588
GE+ L+ A VRA T L++L ++F +L
Sbjct: 140 GEICLLTRGRRTARVRADTYCRLYSLSVDNFNEVL 174
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGM---ADYL 933
V + L ++R ++ ++D+ +++ DF + + ++ + G +
Sbjct: 113 VCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWS 172
Query: 934 APEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKGQLSLPQNLS 992
APE+ + +D WA G+L++ + G+MP+ + SE +V K+++G +L+
Sbjct: 173 APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE--VVLKVSQGHRLYRPHLA 230
Query: 993 PEAV 996
+ +
Sbjct: 231 SDTI 234
>pdb|3DKW|A Chain A, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|B Chain B, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|C Chain C, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|D Chain D, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|E Chain E, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|F Chain F, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|G Chain G, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|H Chain H, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|I Chain I, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|J Chain J, Crystal Structure Of Dnr From Pseudomonas Aeruginosa
Length = 227
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 472 ERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQ 531
++ L H LF L+ Q LL V + G V +QG FY + SG ++
Sbjct: 8 QQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLT 67
Query: 532 EEKNGEVPRVLQRYTAEKLSSFGELALMYNKP-LQASVRAVTNGMLWALKREDF 584
E ++ V T E+ ++F E + + P A+ +AV L+ + +
Sbjct: 68 PEGQEKILEV----TNER-NTFAEAMMFMDTPNYVATAQAVVPSQLFRFSNKAY 116
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 874 AASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGL-SGNRTFTICGMAD- 931
A + + LH + ++R ++ ++LD +++ DF K + G+ + + D
Sbjct: 140 AQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDS 199
Query: 932 ---YLAPEIVQGKGHGLAADWWALGVLIYFML 960
+ APE ++ A+D W+ GV +Y +L
Sbjct: 200 PVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|1Q43|A Chain A, Hcn2i 443-640 In The Presence Of Camp, Selenomethionine
Derivative
pdb|1Q43|B Chain B, Hcn2i 443-640 In The Presence Of Camp, Selenomethionine
Derivative
pdb|1Q5O|A Chain A, Hcn2j 443-645 In The Presence Of Camp, Selenomethionine
Derivative
Length = 207
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYN 561
Q GD ++++G G Y + G V+ T+ K ++ S FGE+ L+
Sbjct: 101 QPGDYIIREGTIGKKXYFIQHGVVSVL-TKGNKEXKLS---------DGSYFGEICLLTR 150
Query: 562 KPLQASVRAVTNGMLWALKREDFRGIL 588
ASVRA T L++L ++F +L
Sbjct: 151 GRRTASVRADTYCRLYSLSVDNFNEVL 177
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.3 bits (72), Expect = 1.6, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 9/143 (6%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGM-----AD 931
V ++ L + ++R ++ ++L + ++ DF K L +
Sbjct: 120 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVK 179
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKGQ-LSLPQ 989
+ APE + +D W+ GVL++ G+ P+ + SE + A + KG+ + P
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGERMGCPA 237
Query: 990 NLSPEAVDLLTKLLVVDENTRLG 1012
E DL+ D R G
Sbjct: 238 GCPREMYDLMNLCWTYDVENRPG 260
>pdb|1O7F|A Chain A, Crystal Structure Of The Regulatory Domain Of Epac2
Length = 469
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYN 561
+ G ++ QG EG +Y++ G V+ + G V T + FG+LAL+ +
Sbjct: 367 KGGTVLFNQGEEGTSWYIILKGSVNVVIYGK---GVV------CTLHEGDDFGKLALVND 417
Query: 562 KPLQAS-VRAVTNGMLWALKREDFRGILMSEFSNLSSLK 599
P AS V N + +EDF IL +N LK
Sbjct: 418 APRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLK 456
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/99 (15%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 874 AASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT---------- 923
A + + + LH +++R ++ ++ ++ ++ + DF + + +T
Sbjct: 114 AKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKK 173
Query: 924 ------FTICGMADYLAPEIVQGKGHGLAADWWALGVLI 956
+T+ G ++APE++ G+ + D ++ G+++
Sbjct: 174 PDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVL 212
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 85/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 64 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 122
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 123 RNETHNPTVKDLIGF-GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 181
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ ++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 182 MYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 239
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 240 VNTFDITVYLLQGRRLLQPEYCPDPL 265
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--RTFTICGMA---D 931
V A + L G ++R ++ +++D + ++ DF + L + T G
Sbjct: 160 VGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR 219
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKGQLSLPQN 990
+ APE + + A+D W+ GV+++ +L GE P+ W + D+++ + +G LP
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY--WNMTNRDVISSVEEG-YRLPAP 276
Query: 991 LS-PEAVDLL 999
+ P A+ L
Sbjct: 277 MGCPHALHQL 286
>pdb|3I54|A Chain A, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I54|B Chain B, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I54|C Chain C, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I54|D Chain D, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I59|B Chain B, Crystal Structure Of Mtbcrp In Complex With N6-Camp
Length = 249
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 468 EAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEV 527
++H++ L +F+ + S L +Q V+ G V +G GD Y++ SG+ ++
Sbjct: 23 QSHMDEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKI 82
Query: 528 MATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ + ++ FGEL++ P +S +T ++ R+ R
Sbjct: 83 GRRAPDGRENLLTIMG-----PSDMFGELSIFDPGPRTSSATTITEVRAVSMDRDALR 135
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 21/251 (8%)
Query: 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQV---LKEKNLMKSV 826
+M+ K L + E G V+L D R +K VKC+ + L E ++M +
Sbjct: 10 NMKELKLLQTIGKGEFGDVMLGDY-------RGNKVAVKCIKNDATAQAFLAEASVMTQL 62
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACP-----LASILHTPLDEQSARFCAASVVAAL 881
S V Q+L + ++ Y+A L S + L + V A+
Sbjct: 63 RHSNLV-QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 121
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGK 941
E L ++R ++ +++ + ++ DF K S + T + APE ++
Sbjct: 122 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKWTAPEALREA 180
Query: 942 GHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQNLSPEAVDLL 999
+D W+ G+L++ + G +P+ R D+V ++ KG ++ P P +++
Sbjct: 181 AFSTKSDVWSFGILLWEIYSFGRVPYP--RIPLKDVVPRVEKGYKMDAPDGCPPAVYEVM 238
Query: 1000 TKLLVVDENTR 1010
+D R
Sbjct: 239 KNCWHLDAAMR 249
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 817 LKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA-CPLASILHTP----LDEQSAR 871
L E NLMK + V + ++ ++ Y+ L L TP L
Sbjct: 57 LAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLL 113
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA- 930
AA + + + +R ++R + +++ + ++ DF + + N G
Sbjct: 114 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 173
Query: 931 --DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+ APE + + +D W+ G+L+ + G +P+ E ++ + +G +
Sbjct: 174 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMV 231
Query: 988 PQNLSPEAVDLLTKL 1002
+ PE + L +L
Sbjct: 232 RPDNCPEELYQLMRL 246
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 817 LKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA-CPLASILHTP----LDEQSAR 871
L E NLMK + V + ++ ++ Y+ L L TP L
Sbjct: 52 LAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLL 108
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA- 930
AA + + + +R ++R + +++ + ++ DF + + N G
Sbjct: 109 DMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 168
Query: 931 --DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+ APE + + +D W+ G+L+ + G +P+ E ++ + +G +
Sbjct: 169 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMV 226
Query: 988 PQNLSPEAVDLLTKL 1002
+ PE + L +L
Sbjct: 227 RPDNCPEELYQLMRL 241
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 817 LKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA-CPLASILHTP----LDEQSAR 871
L E NLMK + V + ++ ++ Y+ L L TP L
Sbjct: 58 LAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLL 114
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA- 930
AA + + + +R ++R + +++ + ++ DF + + N G
Sbjct: 115 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 174
Query: 931 --DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+ APE + + +D W+ G+L+ + G +P+ E ++ + +G +
Sbjct: 175 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMV 232
Query: 988 PQNLSPEAVDLLTKL 1002
+ PE + L +L
Sbjct: 233 RPDNCPEELYQLMRL 247
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
Length = 285
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 817 LKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA-CPLASILHTP----LDEQSAR 871
L E NLMK + V + ++ ++ Y+ L L TP L
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLL 118
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA- 930
AA + + + +R ++R + +++ + ++ DF + + N G
Sbjct: 119 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 178
Query: 931 --DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+ APE + + +D W+ G+L+ + G +P+ E ++ + +G +
Sbjct: 179 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMV 236
Query: 988 PQNLSPEAVDLLTKL 1002
+ PE + L +L
Sbjct: 237 RPDNCPEELYQLMRL 251
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 817 LKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA-CPLASILHTP----LDEQSAR 871
L E NLMK + V + ++ ++ Y+ L L TP L
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA- 930
AA + + + +R ++R + +++ + ++ DF + + N G
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 172
Query: 931 --DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+ APE + + +D W+ G+L+ + G +P+ E ++ + +G +
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMV 230
Query: 988 PQNLSPEAVDLLTKL 1002
+ PE + L +L
Sbjct: 231 RPDNCPEELYQLMRL 245
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 817 LKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA-CPLASILHTP----LDEQSAR 871
L E NLMK + V + ++ ++ Y+ L L TP L
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA- 930
AA + + + +R ++R + +++ + ++ DF + + N G
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 172
Query: 931 --DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+ APE + + +D W+ G+L+ + G +P+ E ++ + +G +
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMV 230
Query: 988 PQNLSPEAVDLLTKL 1002
+ PE + L +L
Sbjct: 231 RPDNCPEELYQLMRL 245
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 817 LKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA-CPLASILHTP----LDEQSAR 871
L E NLMK + V + ++ ++ Y+ L L TP L
Sbjct: 64 LAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLL 120
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA- 930
AA + + + +R ++R + +++ + ++ DF + + N G
Sbjct: 121 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 180
Query: 931 --DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+ APE + + +D W+ G+L+ + G +P+ E ++ + +G +
Sbjct: 181 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMV 238
Query: 988 PQNLSPEAVDLLTKL 1002
+ PE + L +L
Sbjct: 239 RPDNCPEELYQLMRL 253
>pdb|2BYV|E Chain E, Structure Of The Camp Responsive Exchange Factor Epac2 In
Its Auto-Inhibited State
Length = 999
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYN 561
+ G ++ QG EG +Y++ G V+ + G V T + FG+LAL+ +
Sbjct: 367 KGGTVLFNQGEEGTSWYIILKGSVNVVIYGK---GVV------CTLHEGDDFGKLALVND 417
Query: 562 KPLQAS-VRAVTNGMLWALKREDFRGILMSEFSNLSSLK 599
P AS V N + +EDF IL +N LK
Sbjct: 418 APRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLK 456
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDF---RFGKGLSGNRTFT--ICGMAD 931
+ A ++ L ++R ++ ++++ + ++ DF RF + + + T+T + G
Sbjct: 118 IAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 177
Query: 932 --YLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSLP 988
+ APE +Q + A+D W+ G++++ M GE P+ W + D++ I + P
Sbjct: 178 IRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY--WDMTNQDVINAIEQDYRLPP 235
Query: 989 QNLSPEAVDLL 999
P A+ L
Sbjct: 236 PMDCPSALHQL 246
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 817 LKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA-CPLASILHTP----LDEQSAR 871
L E NLMK + V + ++ ++ Y+ L L TP L
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLL 118
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA- 930
AA + + + +R ++R + +++ + ++ DF + + N G
Sbjct: 119 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 178
Query: 931 --DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+ APE + + +D W+ G+L+ + G +P+ E ++ + +G +
Sbjct: 179 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMV 236
Query: 988 PQNLSPEAVDLLTKL 1002
+ PE + L +L
Sbjct: 237 RPDNCPEELYQLMRL 251
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 817 LKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA-CPLASILHTP----LDEQSAR 871
L E NLMK + V + ++ ++ Y+ L L TP L
Sbjct: 61 LAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLL 117
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA- 930
AA + + + +R ++R + +++ + ++ DF + + N G
Sbjct: 118 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 177
Query: 931 --DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+ APE + + +D W+ G+L+ + G +P+ E ++ + +G +
Sbjct: 178 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMV 235
Query: 988 PQNLSPEAVDLLTKL 1002
+ PE + L +L
Sbjct: 236 RPDNCPEELYQLMRL 250
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/103 (19%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 862 HTPLDEQSAR---FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGL 918
H P ++ S+R ++ V + L + ++R V+ ++L ++ DF + +
Sbjct: 157 HNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 216
Query: 919 SGNRTFTICGMA----DYLAPEIVQGKGHGLAADWWALGVLIY 957
+ + + G A ++APE + + + +D W+ G+L++
Sbjct: 217 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 259
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTF 924
LD ++ + +E L R ++R ++ ++++ H+++ DF K L ++
Sbjct: 108 LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDX 167
Query: 925 TIC---GMAD--YLAPEIVQGKGHGLAADWWALGVLIY 957
+ G + + APE + +D W+ GV++Y
Sbjct: 168 XVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 817 LKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA-CPLASILHTP----LDEQSAR 871
L E NLMK + V + ++ ++ Y+ L L TP L
Sbjct: 51 LAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLL 107
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA- 930
AA + + + +R ++R + +++ + ++ DF + + N G
Sbjct: 108 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 167
Query: 931 --DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+ APE + + +D W+ G+L+ + G +P+ E ++ + +G +
Sbjct: 168 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMV 225
Query: 988 PQNLSPEAVDLLTKL 1002
+ PE + L +L
Sbjct: 226 RPDNCPEELYQLMRL 240
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 817 LKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA-CPLASILHTP----LDEQSAR 871
L E NLMK + V + ++ ++ Y+ L L TP L
Sbjct: 65 LAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLL 121
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA- 930
AA + + + +R ++R + +++ + ++ DF + + N G
Sbjct: 122 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 181
Query: 931 --DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+ APE + + +D W+ G+L+ + G +P+ E ++ + +G +
Sbjct: 182 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMV 239
Query: 988 PQNLSPEAVDLLTKL 1002
+ PE + L +L
Sbjct: 240 RPDNCPEELYQLMRL 254
>pdb|3D0S|A Chain A, Camp Receptor Protein From M.Tuberculosis, Camp-Free Form
pdb|3D0S|B Chain B, Camp Receptor Protein From M.Tuberculosis, Camp-Free Form
pdb|4A2U|A Chain A, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|B Chain B, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|C Chain C, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|D Chain D, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|E Chain E, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|F Chain F, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|G Chain G, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|H Chain H, Crp(Cap) From Myco. Tuberculosis, With Camp
Length = 227
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Query: 469 AHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVM 528
+H++ L +F+ + S L +Q V+ G V +G GD Y++ SG+ ++
Sbjct: 2 SHMDEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIG 61
Query: 529 ATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ + ++ FGEL++ P +S +T ++ R+ R
Sbjct: 62 RRAPDGRENLLTIMG-----PSDMFGELSIFDPGPRTSSATTITEVRAVSMDRDALR 113
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 874 AASVVAALEDLHKR-GVLYRGVSPDVLMLD----KSGHLQLVDFRFGKGLSGNRTFT-IC 927
+ ++ L+ +H+R G+++ + P+ ++++ +Q+ G + +T
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSI 196
Query: 928 GMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF----GSWRESEIDIVAKIAKG 983
+Y +PE++ G G AD W+ LI+ ++ G+ F G + D +A+I +
Sbjct: 197 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256
Query: 984 QLSLPQNL 991
LP L
Sbjct: 257 LGELPSYL 264
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 874 AASVVAALEDLHKR-GVLYRGVSPDVLMLD----KSGHLQLVDFRFGKGLSGNRTFT-IC 927
+ ++ L+ +H+R G+++ + P+ ++++ +Q+ G + +T
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSI 196
Query: 928 GMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPF----GSWRESEIDIVAKIAKG 983
+Y +PE++ G G AD W+ LI+ ++ G+ F G + D +A+I +
Sbjct: 197 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256
Query: 984 QLSLPQNL 991
LP L
Sbjct: 257 LGELPSYL 264
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 926 ICGMADYLAPEIV--QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG 983
+ G ++APE + + + + AD ++ +++Y +L GE PF + +I + I +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
Query: 984 QL--SLPQNLSP 993
L ++P++ P
Sbjct: 246 GLRPTIPEDCPP 257
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 862 HTPLDEQSAR---FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGL 918
H P ++ S++ CA V +E L + ++R ++ +++ + +++ DF + +
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 919 ----SGNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIY--FMLQG 962
+T ++APE + + + +D W+ GVL++ F L G
Sbjct: 201 HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 926 ICGMADYLAPEIV--QGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG 983
+ G ++APE + + + + AD ++ +++Y +L GE PF + +I + I +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
Query: 984 QL--SLPQNLSP 993
L ++P++ P
Sbjct: 246 GLRPTIPEDCPP 257
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQN 990
+ APE + + A+D W+ G++++ M GE P+ W S D++ I +G P
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY--WDMSNQDVIKAIEEGYRLPPPM 257
Query: 991 LSPEAVDLL 999
P A+ L
Sbjct: 258 DCPIALHQL 266
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 817 LKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA-CPLASILHTP----LDEQSAR 871
L E NLMK + V + ++ ++ Y+ L L TP L
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA- 930
AA + + + +R ++R + +++ + ++ DF + + N G
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 172
Query: 931 --DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+ APE + + +D W+ G+L+ + G +P+ E ++ + +G +
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMV 230
Query: 988 PQNLSPEAVDLLTKL 1002
+ PE + L +L
Sbjct: 231 RPDNCPEELYQLMRL 245
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 31.2 bits (69), Expect = 3.0, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 903 KSGHLQLVDFRFGKGLSGNRTF------TICGMADYLAPEIVQGKGHGLAADWWALGVLI 956
KS ++L+DF G TF +I Y APE++ G +++D W+ G ++
Sbjct: 197 KSTGIKLIDF-------GCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVL 249
Query: 957 YFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEA 995
+ G + F + ++ +A + +P+N+ EA
Sbjct: 250 AELYTGSLLFRT--HEHMEHLAMMESIIQPIPKNMLYEA 286
>pdb|3CF6|E Chain E, Structure Of Epac2 In Complex With Cyclic-Amp And Rap
Length = 694
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYN 561
+ G ++ QG EG +Y++ G V+ + G V T + FG+LAL+ +
Sbjct: 62 KGGTVLFNQGEEGTSWYIILKGSVNVVIYGK---GVV------CTLHEGDDFGKLALVND 112
Query: 562 KPLQAS-VRAVTNGMLWALKREDFRGILMSEFSNLSSLK 599
P AS V N + +EDF IL +N LK
Sbjct: 113 APRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLK 151
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--RTFTICGMA---D 931
+ A ++ L ++R ++ ++++ + ++ DF + L + T+T G
Sbjct: 156 IAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR 215
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQN 990
+ APE + + A+D W+ G++++ M GE P+ W S +++ I G LP
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY--WELSNHEVMKAINDG-FRLPTP 272
Query: 991 LS-PEAV 996
+ P A+
Sbjct: 273 MDCPSAI 279
>pdb|3R6S|A Chain A, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|B Chain B, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|C Chain C, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|D Chain D, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|E Chain E, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|F Chain F, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
Length = 247
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 605 DLLSRLTILQ------LSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDA- 657
++LSR I Q +++L + V F G TI + E LYII G+V++ A
Sbjct: 26 EILSRAGIFQGVDPTAVNNLIQDMETVRFPRGATIFDEGEPGDRLYIITSGKVKLARHAP 85
Query: 658 ----DLLSNANVCSLKSDLHVEDDGTQSSKELSV 687
+LL+ + +L + D G ++S + V
Sbjct: 86 DGRENLLTIMGPSDMFGELSIFDPGPRTSSAVCV 119
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQN 990
+ APE + + A+D W+ G++++ M GE P+ W S D++ I +G P
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY--WDMSNQDVIKAIEEGYRLPPPM 242
Query: 991 LSPEAVDLL 999
P A+ L
Sbjct: 243 DCPIALHQL 251
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 817 LKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA-CPLASILHTP----LDEQSAR 871
L E NLMK + V + ++ ++ Y+ L L TP L
Sbjct: 66 LAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLL 122
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA- 930
AA + + + +R ++R + +++ + ++ DF + + N G
Sbjct: 123 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 182
Query: 931 --DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSL 987
+ APE + + +D W+ G+L+ + G +P+ E ++ + +G +
Sbjct: 183 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMV 240
Query: 988 PQNLSPEAVDLLTKL 1002
+ PE + L +L
Sbjct: 241 RPDNCPEELYQLMRL 255
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 932 YLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQN 990
+ APE + + A+D W+ G++++ M GE P+ W S D++ I +G P
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY--WDMSNQDVIKAIEEGYRLPPPM 236
Query: 991 LSPEAVDLL 999
P A+ L
Sbjct: 237 DCPIALHQL 245
>pdb|3MZH|A Chain A, Crystal Structure Of Camp Receptor Protein From
Mycobacterium Tuberculosis In Complex With Camp And Its
Dna Binding Element
pdb|3MZH|B Chain B, Crystal Structure Of Camp Receptor Protein From
Mycobacterium Tuberculosis In Complex With Camp And Its
Dna Binding Element
Length = 225
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Query: 470 HIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMA 529
H++ L +F+ + S L +Q V+ G V +G GD Y++ SG+ ++
Sbjct: 1 HMDEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGR 60
Query: 530 TQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ + ++ FGEL++ P +S +T ++ R+ R
Sbjct: 61 RAPDGRENLLTIMG-----PSDMFGELSIFDPGPRTSSATTITEVRAVSMDRDALR 111
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/133 (16%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 874 AASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA--- 930
+A + + + +R ++R + +++ S ++ DF + + N G
Sbjct: 290 SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 349
Query: 931 DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKG-QLSLP 988
+ APE + + +D W+ G+L+ + G +P+ S +++ + +G ++ P
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM--SNPEVIRALERGYRMPRP 407
Query: 989 QNLSPEAVDLLTK 1001
+N E +++ +
Sbjct: 408 ENCPEELYNIMMR 420
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/164 (19%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 861 LHTPLDEQSARFCAASVV-------AALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFR 913
L T L + +F +V A ++ L G ++R ++ ++++ + ++ DF
Sbjct: 110 LDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG 169
Query: 914 FGKGLSGN--RTFTICGMA---DYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFG 967
+ L + +T G + APE + + A+D W+ G++++ ++ GE P+
Sbjct: 170 LSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPY- 228
Query: 968 SWRESEIDIVAKIAKG-QLSLPQNLSPEAVDLLTKLLVVDENTR 1010
W + D++ + +G +L P + L+ + N+R
Sbjct: 229 -WEMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSR 271
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/196 (17%), Positives = 86/196 (43%), Gaps = 20/196 (10%)
Query: 817 LKEKNLMKSVSPSACV--------PQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQ 868
L+E NLMK++ V + + + M G LL+ + +L L +
Sbjct: 55 LEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDF 114
Query: 869 SARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICG 928
SA+ + + + ++ ++R + +++ +S ++ DF + + N G
Sbjct: 115 SAQ-----IAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG 169
Query: 929 MA---DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKG- 983
+ APE + + ++ W+ G+L+Y + G++P+ + D+++ +++G
Sbjct: 170 AKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPG--RTNADVMSALSQGY 227
Query: 984 QLSLPQNLSPEAVDLL 999
++ +N E D++
Sbjct: 228 RMPRMENCPDELYDIM 243
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDF---RFGKGLSGNRTFT--ICGMAD 931
+ A ++ L ++R ++ ++++ + ++ DF RF + + + T+T + G
Sbjct: 144 IAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 203
Query: 932 --YLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKGQLSLP 988
+ APE +Q + A+D W+ G++++ M GE P+ W + D++ I + P
Sbjct: 204 IRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY--WDMTNQDVINAIEQDYRLPP 261
Query: 989 QNLSPEAVDLL 999
P A+ L
Sbjct: 262 PMDCPSALHQL 272
>pdb|1MJB|A Chain A, Crystal Structure Of Yeast Esa1 Histone Acetyltransferase
E338q Mutant Complexed With Acetyl Coenzyme A
Length = 278
Score = 30.8 bits (68), Expect = 4.2, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 562 KPLQ----ASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSH 617
KPL S RA + L L E + I + E S+++S+ + D+L H
Sbjct: 182 KPLSDLGLLSYRAYWSDTLITLLVEHQKEITIDEISSMTSMT---TTDIL---------H 229
Query: 618 LADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
A TL+ + + GQ I+ +NE + Y + + R T D + L
Sbjct: 230 TAKTLNILRYYKGQHIIFLNEDILDRYNRLKAKKRRTIDPNRL 272
>pdb|1FY7|A Chain A, Crystal Structure Of Yeast Esa1 Histone Acetyltransferase
Domain Complexed With Coenzyme A
Length = 278
Score = 30.8 bits (68), Expect = 4.2, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 562 KPLQ----ASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSH 617
KPL S RA + L L E + I + E S+++S+ + D+L H
Sbjct: 182 KPLSDLGLLSYRAYWSDTLITLLVEHQKEITIDEISSMTSMT---TTDIL---------H 229
Query: 618 LADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
A TL+ + + GQ I+ +NE + Y + + R T D + L
Sbjct: 230 TAKTLNILRYYKGQHIIFLNEDILDRYNRLKAKKRRTIDPNRL 272
>pdb|1MJA|A Chain A, Crystal Structure Of Yeast Esa1 Histone Acetyltransferase
Domain Complexed With Acetyl Coenzyme A
Length = 278
Score = 30.8 bits (68), Expect = 4.2, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 562 KPLQ----ASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSH 617
KPL S RA + L L E + I + E S+++S+ + D+L H
Sbjct: 182 KPLSDLGLLSYRAYWSDTLITLLVEHQKEITIDEISSMTSMT---TTDIL---------H 229
Query: 618 LADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
A TL+ + + GQ I+ +NE + Y + + R T D + L
Sbjct: 230 TAKTLNILRYYKGQHIIFLNEDILDRYNRLKAKKRRTIDPNRL 272
>pdb|3TO9|A Chain A, Crystal Structure Of Yeast Esa1 E338q Hat Domain Bound To
Coenzyme A With Active Site Lysine Acetylated
Length = 276
Score = 30.8 bits (68), Expect = 4.2, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 562 KPLQ----ASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSH 617
KPL S RA + L L E + I + E S+++S+ + D+L H
Sbjct: 180 KPLSDLGLLSYRAYWSDTLITLLVEHQKEITIDEISSMTSMT---TTDIL---------H 227
Query: 618 LADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
A TL+ + + GQ I+ +NE + Y + + R T D + L
Sbjct: 228 TAKTLNILRYYKGQHIIFLNEDILDRYNRLKAKKRRTIDPNRL 270
>pdb|3TO6|A Chain A, Crystal Structure Of Yeast Esa1 Hat Domain Complexed With
H4k16coa Bisubstrate Inhibitor
pdb|3TO7|A Chain A, Crystal Structure Of Yeast Esa1 Hat Domain Bound To
Coenzyme A With Active Site Lysine Acetylated
Length = 276
Score = 30.8 bits (68), Expect = 4.2, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 562 KPLQ----ASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSH 617
KPL S RA + L L E + I + E S+++S+ + D+L H
Sbjct: 180 KPLSDLGLLSYRAYWSDTLITLLVEHQKEITIDEISSMTSMT---TTDIL---------H 227
Query: 618 LADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
A TL+ + + GQ I+ +NE + Y + + R T D + L
Sbjct: 228 TAKTLNILRYYKGQHIIFLNEDILDRYNRLKAKKRRTIDPNRL 270
>pdb|1MJ9|A Chain A, Crystal Structure Of Yeast Esa1(C304s) Mutant Complexed
With Coenzyme A
Length = 278
Score = 30.8 bits (68), Expect = 4.3, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 562 KPLQ----ASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSH 617
KPL S RA + L L E + I + E S+++S+ + D+L H
Sbjct: 182 KPLSDLGLLSYRAYWSDTLITLLVEHQKEITIDEISSMTSMT---TTDIL---------H 229
Query: 618 LADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
A TL+ + + GQ I+ +NE + Y + + R T D + L
Sbjct: 230 TAKTLNILRYYKGQHIIFLNEDILDRYNRLKAKKRRTIDPNRL 272
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/106 (17%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 856 PLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFG 915
P +I ++ L + ++ V + L + ++R V+ ++L ++ DF
Sbjct: 152 PAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 916 KGLSGNRTFTICGMA----DYLAPEIVQGKGHGLAADWWALGVLIY 957
+ + + + + G A ++APE + + + +D W+ G+L++
Sbjct: 212 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 257
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/133 (16%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 874 AASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTICGMA--- 930
+A + + + +R ++R + +++ S ++ DF + + N G
Sbjct: 117 SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 176
Query: 931 DYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWRESEIDIVAKIAKG-QLSLP 988
+ APE + + +D W+ G+L+ + G +P+ S +++ + +G ++ P
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG--MSNPEVIRALERGYRMPRP 234
Query: 989 QNLSPEAVDLLTK 1001
+N E +++ +
Sbjct: 235 ENCPEELYNIMMR 247
>pdb|3I59|A Chain A, Crystal Structure Of Mtbcrp In Complex With N6-Camp
Length = 249
Score = 30.8 bits (68), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 468 EAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEV 527
++H++ L +F+ + S L +Q V+ G V +G GD Y++ SG+ ++
Sbjct: 23 QSHMDEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKI 82
Query: 528 MATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ + + FGEL++ P +S +T ++ R+ R
Sbjct: 83 GRRAPDGRENLLTI-----XGPSDMFGELSIFDPGPRTSSATTITEVRAVSMDRDALR 135
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 30.4 bits (67), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 85/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 63 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 121
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 122 RNETHNPTVKDLIGF-GLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 180
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ ++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 181 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 238
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 239 VNTFDITVYLLQGRRLLQPEYCPDPL 264
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 30.4 bits (67), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 77/192 (40%), Gaps = 27/192 (14%)
Query: 796 FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLAC 855
+ ++R ++ ++K +EV ++ + V + C H ++ +
Sbjct: 62 LIDIERDNEDQLKAFKREVMAYRQ-------TRHENVVLFMGACMSPPHLAIITSLCKGR 114
Query: 856 PLASILHTP---LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDF 912
L S++ LD R A +V + LH +G+L++ + + D +G + + DF
Sbjct: 115 TLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDF 173
Query: 913 RF----GKGLSGNRTFTI---CGMADYLAPEIVQGKG---------HGLAADWWALGVLI 956
G +G R + G +LAPEI++ +D +ALG +
Sbjct: 174 GLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIW 233
Query: 957 YFMLQGEMPFGS 968
Y + E PF +
Sbjct: 234 YELHAREWPFKT 245
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 85/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 65 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 123
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 124 RNETHNPTVKDLIGF-GLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 182
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ ++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 183 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 240
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 241 VNTFDITVYLLQGRRLLQPEYCPDPL 266
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 85/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 65 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 123
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 124 RNETHNPTVKDLIGF-GLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 182
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ ++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 183 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 240
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 241 VNTFDITVYLLQGRRLLQPEYCPDPL 266
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 30.0 bits (66), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 85/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 66 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 124
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 125 RNETHNPTVKDLIGF-GLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 183
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ ++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 184 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 241
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 242 VNTFDITVYLLQGRRLLQPEYCPDPL 267
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 30.0 bits (66), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 85/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 70 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 128
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 129 RNETHNPTVKDLIGF-GLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 187
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ ++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 188 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 245
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 246 VNTFDITVYLLQGRRLLQPEYCPDPL 271
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 30.0 bits (66), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/98 (18%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
PL+ + ++ V + L + ++R V+ ++L ++ DF + + +
Sbjct: 156 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 215
Query: 924 FTICGMA----DYLAPEIVQGKGHGLAADWWALGVLIY 957
+ + G A ++APE + + + +D W+ G+L++
Sbjct: 216 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 253
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 30.0 bits (66), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/98 (18%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
PL+ + ++ V + L + ++R V+ ++L ++ DF + + +
Sbjct: 148 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 207
Query: 924 FTICGMA----DYLAPEIVQGKGHGLAADWWALGVLIY 957
+ + G A ++APE + + + +D W+ G+L++
Sbjct: 208 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 245
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 30.0 bits (66), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 891 YRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTI---CGMADYLAPEIVQGKGHGLAA 947
+R V P+ +++ LVDF + + + G Y APE A
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 948 DWWALGVLIYFMLQGEMPF 966
D +AL ++Y L G P+
Sbjct: 217 DIYALTCVLYECLTGSPPY 235
>pdb|3PUM|A Chain A, Crystal Structure Of P Domain Dimer Of Norovirus Va207
pdb|3PUM|B Chain B, Crystal Structure Of P Domain Dimer Of Norovirus Va207
pdb|3PUN|A Chain A, Crystal Structure Of P Domain Dimer Of Norovirus Va207
With Lewis Y Tetrasaccharide
pdb|3PUN|B Chain B, Crystal Structure Of P Domain Dimer Of Norovirus Va207
With Lewis Y Tetrasaccharide
pdb|3PVD|A Chain A, Crystal Structure Of P Domain Dimer Of Norovirus Va207
Complexed With 3'-Sialyl-Lewis X Tetrasaccharide
pdb|3PVD|B Chain B, Crystal Structure Of P Domain Dimer Of Norovirus Va207
Complexed With 3'-Sialyl-Lewis X Tetrasaccharide
Length = 316
Score = 29.6 bits (65), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 610 LTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL-----SNAN 664
+ +L++S + + S Q + +EG+ ++Q R T D +LL S +
Sbjct: 8 IPVLKISEMTN--SRFPVPVDQMYTSRSEGI----VVQPQNGRATIDGELLGTTLVSPVS 61
Query: 665 VCSLKSDLHVEDDGTQSSKELSVEKSEGS 693
VC+ K +L E G +L + +GS
Sbjct: 62 VCNFKGNLQAEVPGQHQLYQLQLTNLDGS 90
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 29.6 bits (65), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/98 (18%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT 923
PL+ + ++ V + L + ++R V+ ++L ++ DF + + +
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 213
Query: 924 FTICGMA----DYLAPEIVQGKGHGLAADWWALGVLIY 957
+ + G A ++APE + + + +D W+ G+L++
Sbjct: 214 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 251
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 29.6 bits (65), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 85/206 (41%), Gaps = 16/206 (7%)
Query: 803 SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY-----LACPL 857
S ++ +G+ Q L E +MK S V +L C S + L++ Y L +
Sbjct: 66 SLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 124
Query: 858 ASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG 917
+ H P + F V ++ L + ++R ++ MLD+ +++ DF +
Sbjct: 125 RNETHNPTVKDLIGF-GLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 183
Query: 918 LSGNRTFTICGM------ADYLAPEIVQGKGHGLAADWWALGVLIY-FMLQGEMPFGSWR 970
+ ++ ++A E +Q + +D W+ GVL++ M +G P+
Sbjct: 184 MLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-- 241
Query: 971 ESEIDIVAKIAKGQLSLPQNLSPEAV 996
+ DI + +G+ L P+ +
Sbjct: 242 VNTFDITVYLLQGRRLLQPEYCPDPL 267
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,972,728
Number of Sequences: 62578
Number of extensions: 1358002
Number of successful extensions: 4595
Number of sequences better than 100.0: 876
Number of HSP's better than 100.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 385
Number of HSP's that attempted gapping in prelim test: 3076
Number of HSP's gapped (non-prelim): 1039
length of query: 1082
length of database: 14,973,337
effective HSP length: 109
effective length of query: 973
effective length of database: 8,152,335
effective search space: 7932221955
effective search space used: 7932221955
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)