Query 001412
Match_columns 1082
No_of_seqs 700 out of 5849
Neff 8.5
Searched_HMMs 29240
Date Tue Mar 26 16:41:28 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001412.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_713-717//hhsearch_pdb/001412hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v5w_A G-protein coupled recep 1.0 1 1 470.9 26.2 281 764-1045 184-473 (689)
2 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 465.9 25.4 273 763-1038 26-307 (311)
3 3ubd_A Ribosomal protein S6 ki 1.0 1 1 452.0 22.3 275 765-1043 20-303 (304)
4 4b9d_A Serine/threonine-protei 1.0 1 1 433.5 19.3 254 767-1027 22-282 (350)
5 4fie_A Serine/threonine-protei 1.0 1 1 429.0 23.7 252 768-1028 150-407 (423)
6 4fih_A Serine/threonine-protei 1.0 1 1 428.1 20.9 251 769-1028 74-330 (346)
7 3hyh_A Carbon catabolite-derep 1.0 1 1 422.5 21.0 255 766-1027 10-268 (275)
8 3pfq_A PKC-B, PKC-beta, protei 1.0 1 1 421.2 26.7 282 763-1046 335-622 (674)
9 3uto_A Twitchin; kinase, muscl 1.0 1 1 413.3 24.2 259 766-1033 154-422 (573)
10 4dc2_A Protein kinase C IOTA t 1.0 1 1 409.5 25.7 294 764-1059 47-354 (396)
No 1
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=470.93 Aligned_cols=281 Identities=26% Similarity=0.449 Sum_probs=253.8
Q ss_pred CCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHH---CCCCCCCCCCCEEEEEE
Q ss_conf 655767808998846789489999999499939999994020110202499999998333---11898662142028984
Q 001412 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLM---KSVSPSACVPQILCTCA 840 (1082)
Q Consensus 764 ~~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il---~~l~~~~~I~~l~~~~~ 840 (1082)
..+++++|++++.||+|+||.||+|+++.+++.||+|++.|..+........+.+|..++ +.+ +||+|++++++|+
T Consensus 184 ~~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~f~ 262 (689)
T 3v5w_A 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFH 262 (689)
T ss_dssp CCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEE
T ss_pred CCCCHHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEEEEE
T ss_conf 999568928888983164839999999999989999997578825255689999999999999648-9998717999999
Q ss_pred ECCEEEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCC
Q ss_conf 1891899991258889778742--99999999999999999999999879784556999599757995999952787447
Q 001412 841 DSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGL 918 (1082)
Q Consensus 841 ~~~~~~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~ 918 (1082)
+..++|+||||+.||+|..++. +.|++..+++|++||+.||.|||++||+||||||+|||++.+|++||+|||+|+.+
T Consensus 263 ~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred ECCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEECCCCEEEEC
T ss_conf 89988999946899829999986699999999999999999999999788541688668759808998896456556663
Q ss_pred CCCCCEEEEECCCCCCHHHHC-CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC-CCHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf 999730375226888902343-7998984421112377865436999999999-99799999985089999999998899
Q 001412 919 SGNRTFTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWR-ESEIDIVAKIAKGQLSLPQNLSPEAV 996 (1082)
Q Consensus 919 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~pf~~~~-~~~~~~~~~i~~~~~~~p~~~s~~~~ 996 (1082)
......++|||+.|||||++. +..|+.++|||||||++|+|++|.+||.+.. .+...++..+....+.+|..++++++
T Consensus 343 ~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~ 422 (689)
T 3v5w_A 343 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR 422 (689)
T ss_dssp SSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHH
T ss_conf 78987776578673188998479999959999999999999986879999998677999998505798888766999999
Q ss_pred HHHHHHCCCCCCCCCCCC--CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999983136923339999--9357761999778993110137999990000
Q 001412 997 DLLTKLLVVDENTRLGSQ--GPTSVKTHPWFRDVDWKGIAESTSPVPHEIM 1045 (1082)
Q Consensus 997 ~li~~lL~~dp~~R~s~~--~~~eil~hp~f~~~~~~~~~~~~~~~p~~~~ 1045 (1082)
+||.+||+.||.+|+++. ++.++++||||+++||+.+..++.++|+.+.
T Consensus 423 dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~~~~~~pP~~P~ 473 (689)
T 3v5w_A 423 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPP 473 (689)
T ss_dssp HHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred HHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCCCC
T ss_conf 999997608986879998889999966915047898899708999593699
No 2
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=465.87 Aligned_cols=273 Identities=30% Similarity=0.464 Sum_probs=251.0
Q ss_pred CCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC
Q ss_conf 56557678089988467894899999994999399999940201102024999999983331189866214202898418
Q 001412 763 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (1082)
Q Consensus 763 ~~~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~ 842 (1082)
......++|++++.||+|+||.||+|+++.+++.||+|++.+..+........+.+|+.+|+.++| |+|++++++|++.
T Consensus 26 ~~~~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~H-pnIv~l~~~~~~~ 104 (311)
T 4aw0_A 26 PRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLYFTFQDD 104 (311)
T ss_dssp -CCCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC-TTBCCEEEEEECS
T ss_pred CCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCC-CCCCEEEEEEEEC
T ss_conf 888885236898898316484999999999998999999888887797899999999999986799-8989199999738
Q ss_pred CEEEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCC
Q ss_conf 91899991258889778742--9999999999999999999999987978455699959975799599995278744799
Q 001412 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG 920 (1082)
Q Consensus 843 ~~~~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~ 920 (1082)
+++|+||||+.||+|.+++. +.+++..++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+..
T Consensus 105 ~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 105 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp SEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred CEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCC
T ss_conf 98999996489989999998749999999999999999999999988782687878996985898889987687502577
Q ss_pred ----CCCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf ----9730375226888902343799898442111237786543699999999999799999985089999999998899
Q 001412 921 ----NRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAV 996 (1082)
Q Consensus 921 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~ 996 (1082)
....++|||+.|||||++.+..|+.++|||||||++|+|++|+.||.+ .+...++..|....+.+|..++++++
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--~~~~~~~~~i~~~~~~~p~~~s~~~~ 262 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAKIIKLEYDFPEKFFPKAR 262 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCCCTTCCHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf 8776543675568030799897689999689899899999999749899899--79999999997199999965699999
Q ss_pred HHHHHHCCCCCCCCCCCCC---HHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 9999831369233399999---35776199977899311013799
Q 001412 997 DLLTKLLVVDENTRLGSQG---PTSVKTHPWFRDVDWKGIAESTS 1038 (1082)
Q Consensus 997 ~li~~lL~~dp~~R~s~~~---~~eil~hp~f~~~~~~~~~~~~~ 1038 (1082)
+||.+||+.||++|+++.+ ...+++||||+++||+.+.+.++
T Consensus 263 dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~~p 307 (311)
T 4aw0_A 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTP 307 (311)
T ss_dssp HHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCC
T ss_pred HHHHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCCHHHHCCCCC
T ss_conf 999997628975780967975877987798758989899407999
No 3
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=452.00 Aligned_cols=275 Identities=29% Similarity=0.558 Sum_probs=248.9
Q ss_pred CCCCCCEEEEEEECCCCCEEEEEEEEC---CCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
Q ss_conf 557678089988467894899999994---99939999994020110202499999998333118986621420289841
Q 001412 765 KVSLTDMEWRKCLYSTDCSEIGLVLLR---DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (1082)
Q Consensus 765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~---~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~ 841 (1082)
....++|++++.||+|+||.||+|++. .+++.||+|++.+...... ....+.+|+.+|+.++| |+|++++++|.+
T Consensus 20 ~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~H-pnIv~l~~~~~~ 97 (304)
T 3ubd_A 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEVNH-PFIVKLHYAFQT 97 (304)
T ss_dssp CCCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-ECC------CCCCCCCC-TTEECEEEEEEE
T ss_pred CCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHH-HHHHHHHHHHHHHHCCC-CCCCEEEEEEEE
T ss_conf 3895565898897218883999999855887897999999815776847-89999999999987799-799909999998
Q ss_pred CCEEEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCC
Q ss_conf 891899991258889778742--999999999999999999999998797845569995997579959999527874479
Q 001412 842 SMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 919 (1082)
Q Consensus 842 ~~~~~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~ 919 (1082)
...+|+|||||.||+|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+...
T Consensus 98 ~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 98 EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp TTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred CCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCCEECC
T ss_conf 99999999757998889999755999999999999999999999997799588887899578689988762366343326
Q ss_pred C--CCCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf 9--97303752268889023437998984421112377865436999999999997999999850899999999988999
Q 001412 920 G--NRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVD 997 (1082)
Q Consensus 920 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~ 997 (1082)
. ....+.+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+ .+..+.+..|.+..+.+|..+++++++
T Consensus 178 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~--~~~~~~~~~i~~~~~~~p~~~s~~~~~ 255 (304)
T 3ubd_A 178 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG--KDRKETMTMILKAKLGMPQFLSPEAQS 255 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCCCTTSCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 887630454418150799996568878777636119999999859899898--499999999971899998768999999
Q ss_pred HHHHHCCCCCCCCCCCC--CHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99983136923339999--93577619997789931101379999900
Q 001412 998 LLTKLLVVDENTRLGSQ--GPTSVKTHPWFRDVDWKGIAESTSPVPHE 1043 (1082)
Q Consensus 998 li~~lL~~dp~~R~s~~--~~~eil~hp~f~~~~~~~~~~~~~~~p~~ 1043 (1082)
||.+||+.||++|+++. .++++++||||+++||+.+..++.++|+.
T Consensus 256 li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l~~~~~~pP~~ 303 (304)
T 3ubd_A 256 LLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFK 303 (304)
T ss_dssp HHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSSC
T ss_pred HHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCC
T ss_conf 999986469878799986789999769040378999998489994967
No 4
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=433.48 Aligned_cols=254 Identities=18% Similarity=0.249 Sum_probs=230.5
Q ss_pred CCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEE
Q ss_conf 76780899884678948999999949993999999402011020249999999833311898662142028984189189
Q 001412 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (1082)
Q Consensus 767 ~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~ 846 (1082)
++++|++++.||+|+||.||+++++.+++.||+|++.+.... ......+.+|+.+|+.|+| |+|++++++|.+...+|
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~H-pnIV~~~~~~~~~~~~y 99 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-SKEREESRREVAVLANMKH-PNIVQYRESFEENGSLY 99 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC-HHHHHHHHHHHHHHHHCCC-TTBCCEEEEEEETTEEE
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC-HHHHHHHHHHHHHHHHCCC-CCCCCEEEEEEECCEEE
T ss_conf 512558847970277939999998899989999998658789-7999999999999987799-89891999999899999
Q ss_pred EEEECCCCCCHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC-
Q ss_conf 9991258889778742----99999999999999999999999879784556999599757995999952787447999-
Q 001412 847 LLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN- 921 (1082)
Q Consensus 847 lv~E~~~g~~L~~~l~----~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~- 921 (1082)
+|||||.||+|.+++. ..+++..++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+...
T Consensus 100 iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred EEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEECCCCCCEEECCCC
T ss_conf 99948899839999997389999789999999999999999998991513597899798789998976465214406885
Q ss_pred -CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCHHHHHHH
Q ss_conf -7303752268889023437998984421112377865436999999999997999999850899-99999998899999
Q 001412 922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQL-SLPQNLSPEAVDLL 999 (1082)
Q Consensus 922 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li 999 (1082)
...+.+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+ .+..+++..|..+.. .++..+++++++||
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~--~~~~~~~~~i~~~~~~~~~~~~s~~~~~li 257 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA--GSMKNLVLKIISGSFPPVSLHYSYDLRSLV 257 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHTCCCCCCTTSCHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
T ss_conf 410145788360399998799989599999999999999978799899--699999999980899999755799999999
Q ss_pred HHHCCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 9831369233399999357761999778
Q 001412 1000 TKLLVVDENTRLGSQGPTSVKTHPWFRD 1027 (1082)
Q Consensus 1000 ~~lL~~dp~~R~s~~~~~eil~hp~f~~ 1027 (1082)
.+||+.||.+||++. ++++||||..
T Consensus 258 ~~~L~~dP~~R~s~~---e~l~hp~~~~ 282 (350)
T 4b9d_A 258 SQLFKRNPRDRPSVN---SILEKGFIAK 282 (350)
T ss_dssp HHHTCSSGGGSCCHH---HHHTSHHHHT
T ss_pred HHHCCCCHHHCCCHH---HHHCCHHHHC
T ss_conf 998558966790899---9963997616
No 5
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=429.03 Aligned_cols=252 Identities=21% Similarity=0.361 Sum_probs=227.6
Q ss_pred CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEE
Q ss_conf 67808998846789489999999499939999994020110202499999998333118986621420289841891899
Q 001412 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (1082)
Q Consensus 768 ~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~l 847 (1082)
.+.|++++.||+|+||.||+|.++.+++.||+|++.+... ...+.+.+|+.+|+.++| ++|++++++|.+.+++|+
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~H-pnIV~l~~~~~~~~~~~i 225 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQH-ENVVEMYNSYLVGDELWV 225 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC---SSGGGHHHHHHHHHHCCC-TTBCCEEEEEEETTEEEE
T ss_pred HHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCH---HHHHHHHHHHHHHHHCCC-CCCCCEEEEEEECCEEEE
T ss_conf 6843861696248184899999999998999999862554---689999999999985799-898716899998999999
Q ss_pred EEECCCCCCHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCC--CCCE
Q ss_conf 991258889778742-9999999999999999999999987978455699959975799599995278744799--9730
Q 001412 848 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG--NRTF 924 (1082)
Q Consensus 848 v~E~~~g~~L~~~l~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~--~~~~ 924 (1082)
|||||.||+|.++++ +.+++..++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+.. ....
T Consensus 226 VmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 305 (423)
T 4fie_A 226 VMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305 (423)
T ss_dssp EEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred EEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEECCCCCEECCCCCCCCC
T ss_conf 99698998289887616989999999999999999999988904465787778985899989803726547778876434
Q ss_pred EEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC---CCCCCCCCHHHHHHHHH
Q ss_conf 375226888902343799898442111237786543699999999999799999985089---99999999889999998
Q 001412 925 TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQ---LSLPQNLSPEAVDLLTK 1001 (1082)
Q Consensus 925 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~ 1001 (1082)
+++||+.|||||++.+..|+.++|||||||++|+|++|+.||.+ .+..+.+..|.... +..+..+++++++||.+
T Consensus 306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT--SCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 66647472799997799999689999999999999978799898--6999999999727998876501299999999999
Q ss_pred HCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 313692333999993577619997789
Q 001412 1002 LLVVDENTRLGSQGPTSVKTHPWFRDV 1028 (1082)
Q Consensus 1002 lL~~dp~~R~s~~~~~eil~hp~f~~~ 1028 (1082)
||..||++|+++. ++|+||||+..
T Consensus 384 ~L~~dP~~R~ta~---ell~Hp~~~~~ 407 (423)
T 4fie_A 384 LLVRDPAQRATAA---ELLKHPFLAKA 407 (423)
T ss_dssp HSCSSTTTSCCHH---HHTTCGGGGGC
T ss_pred HCCCCHHHCCCHH---HHHCCHHHCCC
T ss_conf 8678956890999---99609875689
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=428.15 Aligned_cols=251 Identities=21% Similarity=0.357 Sum_probs=226.7
Q ss_pred CCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEE
Q ss_conf 78089988467894899999994999399999940201102024999999983331189866214202898418918999
Q 001412 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (1082)
Q Consensus 769 ~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~lv 848 (1082)
+.|++++.||+|+||.||+|.++.+++.||+|++.+... ...+.+.+|+.+|+.++| |+|++++++|.+.+++|+|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~H-pnIV~l~~~~~~~~~~~iv 149 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQH-ENVVEMYNSYLVGDELWVV 149 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---SSGGGGHHHHHHHHHCCC-TTBCCEEEEEEETTEEEEE
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCH---HHHHHHHHHHHHHHHCCC-CCCCCEEEEEEECCEEEEE
T ss_conf 753870796027282999999989998999999852765---689999999999986799-8999199999989999999
Q ss_pred EECCCCCCHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCC--CCCEE
Q ss_conf 91258889778742-9999999999999999999999987978455699959975799599995278744799--97303
Q 001412 849 LNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG--NRTFT 925 (1082)
Q Consensus 849 ~E~~~g~~L~~~l~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~--~~~~~ 925 (1082)
||||.||+|.+++. +.+++..++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+.. ....+
T Consensus 150 mEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 229 (346)
T 4fih_A 150 MEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 229 (346)
T ss_dssp ECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred EECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEECCCCCEECCCCCCCCCC
T ss_conf 96989980899987189899999999999999999999888355627889978879998899027575366788775346
Q ss_pred EEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC---CCCCCCCHHHHHHHHHH
Q ss_conf 752268889023437998984421112377865436999999999997999999850899---99999998899999983
Q 001412 926 ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQL---SLPQNLSPEAVDLLTKL 1002 (1082)
Q Consensus 926 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~---~~p~~~s~~~~~li~~l 1002 (1082)
++||+.|||||++.+..|+.++|||||||++|+|++|+.||.+ .+..+.+..|..... ..+..+++++++||.+|
T Consensus 230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~ 307 (346)
T 4fih_A 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 307 (346)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT--SCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 5627582799997799999689999999999999978799898--59999999997179998875022999999999998
Q ss_pred CCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 13692333999993577619997789
Q 001412 1003 LVVDENTRLGSQGPTSVKTHPWFRDV 1028 (1082)
Q Consensus 1003 L~~dp~~R~s~~~~~eil~hp~f~~~ 1028 (1082)
|+.||++|+++. ++|+||||+..
T Consensus 308 L~~dP~~R~ta~---e~l~Hp~~~~~ 330 (346)
T 4fih_A 308 LVRDPAQRATAA---ELLKHPFLAKA 330 (346)
T ss_dssp SCSSTTTSCCHH---HHTTCGGGGGC
T ss_pred CCCCHHHCCCHH---HHHCCHHHCCC
T ss_conf 679956890999---99609865689
No 7
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=422.46 Aligned_cols=255 Identities=23% Similarity=0.398 Sum_probs=234.1
Q ss_pred CCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEE
Q ss_conf 57678089988467894899999994999399999940201102024999999983331189866214202898418918
Q 001412 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (1082)
Q Consensus 766 ~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~ 845 (1082)
..+++|++++.||+|+||.||++.++.+++.||+|++.+...........+.+|+.+|+.++| |+|++++++|.+.+.+
T Consensus 10 ~~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~H-pnIv~~~~~~~~~~~~ 88 (275)
T 3hyh_A 10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH-PHIIKLYDVIKSKDEI 88 (275)
T ss_dssp ----CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCC-TTBCCEEEEEECSSEE
T ss_pred CEEECEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCC-CCCCEEEEEEEECCEE
T ss_conf 893386899998217681999999999998999999837886787899999999999987799-8999299999989989
Q ss_pred EEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCC-CC
Q ss_conf 99991258889778742--9999999999999999999999987978455699959975799599995278744799-97
Q 001412 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG-NR 922 (1082)
Q Consensus 846 ~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~-~~ 922 (1082)
|+||||+ +|+|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.... ..
T Consensus 89 ~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 89 IMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EEEEECC-CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCCCC
T ss_conf 9999278-997899998749999999999999999999999988930666875876887999899945477726678874
Q ss_pred CEEEEECCCCCCHHHHCCCCC-CCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 303752268889023437998-9844211123778654369999999999979999998508999999999889999998
Q 001412 923 TFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 1001 (1082)
Q Consensus 923 ~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~ 1001 (1082)
..+.+||+.|||||++.+..+ +.++|||||||++|+|++|+.||.+ .+....++.+..+.+.+|..+++++++||.+
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~--~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~ 245 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 245 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCCCTTSCHHHHHHHHH
T ss_pred CCCEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 67702893527745506898889836568789999999988799899--8999999999749999987799999999999
Q ss_pred HCCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 31369233399999357761999778
Q 001412 1002 LLVVDENTRLGSQGPTSVKTHPWFRD 1027 (1082)
Q Consensus 1002 lL~~dp~~R~s~~~~~eil~hp~f~~ 1027 (1082)
||+.||++||++. ++++||||+.
T Consensus 246 ~L~~dP~~R~s~~---eil~hpw~k~ 268 (275)
T 3hyh_A 246 MLIVNPLNRISIH---EIMQDDWFKV 268 (275)
T ss_dssp HSCSSGGGSCCHH---HHHHCHHHHT
T ss_pred HCCCCHHHCCCHH---HHHCCCCCCC
T ss_conf 8658966891999---9971920065
No 8
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=1.00 E-value=1 Score=421.15 Aligned_cols=282 Identities=27% Similarity=0.454 Sum_probs=260.4
Q ss_pred CCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC
Q ss_conf 56557678089988467894899999994999399999940201102024999999983331189866214202898418
Q 001412 763 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (1082)
Q Consensus 763 ~~~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~ 842 (1082)
...+.+++|++++.||+|+||.||++.++.+++.||+|++.+...........+..|..++..+.+|++|+.++.+|.+.
T Consensus 335 ~~~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~ 414 (674)
T 3pfq_A 335 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM 414 (674)
T ss_dssp -----CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCS
T ss_pred CCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEC
T ss_conf 56543102279989805998899999999999389999986011245778999999999998556998488888899858
Q ss_pred CEEEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCC-
Q ss_conf 91899991258889778742--999999999999999999999998797845569995997579959999527874479-
Q 001412 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS- 919 (1082)
Q Consensus 843 ~~~~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~- 919 (1082)
..+|+||||+.|++|..++. +.+++..++.|+.||+.||.|||+++|+||||||+|||++.++++||+|||+++...
T Consensus 415 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 415 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred CEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEEEECCEEECCCC
T ss_conf 87899993767984999997538988899999999999999999867907544876558983789689966540111456
Q ss_pred -CCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf -9973037522688890234379989844211123778654369999999999979999998508999999999889999
Q 001412 920 -GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDL 998 (1082)
Q Consensus 920 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l 998 (1082)
.....+++||+.|+|||++.+..++.++||||||+++|+|++|..||.+ .+..+++..|....+.+|..++.++.+|
T Consensus 495 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~--~~~~~~~~~i~~~~~~~p~~~s~~~~~l 572 (674)
T 3pfq_A 495 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG--EDEDELFQSIMEHNVAYPKSMSKEAVAI 572 (674)
T ss_dssp TTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHSSCCCCCTTSCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECHHHHHHHHHCCCCCCCC--CCHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf 88642345688763597663678999501680618999999709999899--8989999999848778885479999999
Q ss_pred HHHHCCCCCCCCCCCC--CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9983136923339999--93577619997789931101379999900001
Q 001412 999 LTKLLVVDENTRLGSQ--GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMS 1046 (1082)
Q Consensus 999 i~~lL~~dp~~R~s~~--~~~eil~hp~f~~~~~~~~~~~~~~~p~~~~~ 1046 (1082)
|.+||..||.+|+++. +..++++||||+++||+.+..+++++|+.+..
T Consensus 573 i~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p~~ 622 (674)
T 3pfq_A 573 CKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKA 622 (674)
T ss_dssp HHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHHHTTTCSCCSCCCBC
T ss_pred HHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCC
T ss_conf 99974479878789987759998628421388999998388998987847
No 9
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=1.00 E-value=1 Score=413.29 Aligned_cols=259 Identities=22% Similarity=0.347 Sum_probs=232.8
Q ss_pred CCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEE
Q ss_conf 57678089988467894899999994999399999940201102024999999983331189866214202898418918
Q 001412 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (1082)
Q Consensus 766 ~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~ 845 (1082)
..+++|++++.||+|+||.||++.++.+++.||+|++.+... .....+.+|+.+|+.|+| |+|++++++|.+...+
T Consensus 154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~---~~~~~~~~Ei~il~~l~h-pnIv~l~~~~~~~~~~ 229 (573)
T 3uto_A 154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQTMSVLRH-PTLVNLHDAFEDDNEM 229 (573)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHHHTCC-TTBCCEEEEEECSSEE
T ss_pred CCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCH---HHHHHHHHHHHHHHHCCC-CCCCEEEEEEEECCEE
T ss_conf 685361898899616484999999988998999999915242---059999999999986899-8989499999989988
Q ss_pred EEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC--CCCEEEEECCCCCCCCC
Q ss_conf 99991258889778742---99999999999999999999999879784556999599757--99599995278744799
Q 001412 846 GLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK--SGHLQLVDFRFGKGLSG 920 (1082)
Q Consensus 846 ~lv~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~--~g~vkL~DFg~a~~~~~ 920 (1082)
|++||||.||+|.+++. +.|++..++.|++||+.||.|||+++|+||||||+|||++. .+.+||+|||+|+.+..
T Consensus 230 ~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 230 VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp EEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred EEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEEEEECCCEEECCC
T ss_conf 99986069995999999867999999999999999999999998892305687655121478889789940663068569
Q ss_pred C-CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC----CCCCHHH
Q ss_conf 9-7303752268889023437998984421112377865436999999999997999999850899999----9999889
Q 001412 921 N-RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLP----QNLSPEA 995 (1082)
Q Consensus 921 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p----~~~s~~~ 995 (1082)
. ...+.+||+.|||||++.+..|+.++|||||||++|+|++|..||.+ .+..+.+..|......++ ..+++++
T Consensus 310 ~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~--~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 387 (573)
T 3uto_A 310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG--ENDDETLRNVKSCDWNMDDSAFSGISEDG 387 (573)
T ss_dssp TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC--SSHHHHHHHHHTTCCCCCSGGGTTSCHHH
T ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf 9823234779451499996899989699999999999999978799798--69999999998489998953246899999
Q ss_pred HHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
Q ss_conf 99999831369233399999357761999778993110
Q 001412 996 VDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGI 1033 (1082)
Q Consensus 996 ~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~~~~~~ 1033 (1082)
++||.+||+.||.+|+++. ++|+||||+..+|...
T Consensus 388 ~dli~~~L~~dp~~R~t~~---e~l~Hpw~~~~~~~~~ 422 (573)
T 3uto_A 388 KDFIRKLLLADPNTRMTIH---QALEHPWLTPGNAPGR 422 (573)
T ss_dssp HHHHHTTSCSSGGGSCCHH---HHHHSTTTSCCCCTTT
T ss_pred HHHHHHHCCCCHHHCCCHH---HHHCCCCCCCCCCCCC
T ss_conf 9999988648956892999---9953957487989875
No 10
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=1.00 E-value=1 Score=409.48 Aligned_cols=294 Identities=29% Similarity=0.499 Sum_probs=260.1
Q ss_pred CCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC
Q ss_conf 65576780899884678948999999949993999999402011020249999999833311898662142028984189
Q 001412 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (1082)
Q Consensus 764 ~~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~ 843 (1082)
..+.+++|++++.||+|+||.||+++++.+++.||+|++.+...........+.+|..++.++..||+|++++++|.+..
T Consensus 47 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~ 126 (396)
T 4dc2_A 47 SSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES 126 (396)
T ss_dssp --CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred CCCCHHHCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC
T ss_conf 67875571798899537986999999989997999999975661678899999999999996479997571689999799
Q ss_pred EEEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCC--
Q ss_conf 1899991258889778742--999999999999999999999998797845569995997579959999527874479--
Q 001412 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS-- 919 (1082)
Q Consensus 844 ~~~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~-- 919 (1082)
.+|+||||+.|++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 127 ~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 127 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEEEECCEEEECCCC
T ss_conf 99999973899928999987499999999999999999999999789775567889889888999898122303422567
Q ss_pred CCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC-------CCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 997303752268889023437998984421112377865436999999999-------9979999998508999999999
Q 001412 920 GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWR-------ESEIDIVAKIAKGQLSLPQNLS 992 (1082)
Q Consensus 920 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-------~~~~~~~~~i~~~~~~~p~~~s 992 (1082)
.....+.+||+.|+|||++.+..++.++|+||||+++|+|++|+.||.... ......++.+....+.+|..++
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s 286 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS 286 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTTSC
T ss_pred CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 77434445774447824541788981787787899999998498987666665552010689999998616667887689
Q ss_pred HHHHHHHHHHCCCCCCCCCCCC---CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8899999983136923339999---935776199977899311013799999000010111447877898
Q 001412 993 PEAVDLLTKLLVVDENTRLGSQ---GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSRISQHLDSHFEDS 1059 (1082)
Q Consensus 993 ~~~~~li~~lL~~dp~~R~s~~---~~~eil~hp~f~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 1059 (1082)
.++.+||++||+.||.+||++. ++.++++||||++++|+.+..++..+|+. +.+....+..++|.
T Consensus 287 ~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~~~~~~pp~~--p~~~~~~d~~~fd~ 354 (396)
T 4dc2_A 287 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFK--PNISGEFGLDNFDS 354 (396)
T ss_dssp HHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHHTTCSCCSCC--CCCCSSTTGGGSCH
T ss_pred HHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCC--CCCCCCCCHHHCCH
T ss_conf 999999998753898685899877899999649464688999997088999976--88789661112582
Done!