Query         001412
Match_columns 1082
No_of_seqs    700 out of 5849
Neff          8.5 
Searched_HMMs 13730
Date          Tue Mar 26 16:48:18 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/001412.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_713-717//hhsearch_scop/001412hhsearch_scop 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0       0       0  444.3  28.6  288  765-1057    1-294 (337)
  2 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0       0       0  428.0  29.8  288  765-1058   37-328 (350)
  3 d1fota_ d.144.1.7 (A:) cAMP-de 100.0       0       0  425.7  27.6  275  766-1044    1-279 (316)
  4 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0       0       0  426.6  24.9  272  765-1039    4-284 (288)
  5 d1omwa3 d.144.1.7 (A:186-549)  100.0       0       0  422.1  25.7  277  766-1043    1-286 (364)
  6 d1xjda_ d.144.1.7 (A:) Protein 100.0       0       0  421.1  24.8  285  768-1058    1-289 (320)
  7 d2j4za1 d.144.1.7 (A:126-388)  100.0       0       0  415.9  23.7  257  765-1027    2-260 (263)
  8 d1koaa2 d.144.1.7 (A:5915-6264 100.0       0       0  396.2  26.4  258  767-1033   24-291 (350)
  9 d1koba_ d.144.1.7 (A:) Twitchi 100.0       0       0  396.4  25.3  254  767-1029   27-290 (352)
 10 d1a6qa2 d.219.1.1 (A:2-296) Pr 100.0       0       0  395.0  25.3  268   76-390     2-294 (295)
 11 d1jksa_ d.144.1.7 (A:) Death-a 100.0       0       0  394.5  25.6  267  769-1041   10-290 (293)
 12 d1yhwa1 d.144.1.7 (A:249-541)  100.0       0       0  398.9  20.8  250  769-1027   20-275 (293)
 13 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0       0       0  399.3  17.8  262  765-1032    2-308 (322)
 14 d1a06a_ d.144.1.7 (A:) Calmodu 100.0       0       0  393.9  21.9  252  769-1028    9-270 (307)
 15 d1nvra_ d.144.1.7 (A:) Cell cy 100.0       0       0  395.7  19.3  253  768-1027    4-265 (271)
 16 d2java1 d.144.1.7 (A:3-271) Se 100.0       0       0  387.7  21.3  252  767-1025    2-269 (269)
 17 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0       0       0  386.3  21.0  286  764-1051   19-319 (322)
 18 d2jfla1 d.144.1.7 (A:21-308) S 100.0       0       0  390.1  17.4  250  769-1027   12-274 (288)
 19 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0       0       0  386.1  20.7  250  770-1027   16-272 (309)
 20 d1phka_ d.144.1.7 (A:) gamma-s 100.0       0       0  380.6  24.1  256  768-1028    2-276 (277)
 21 d1tkia_ d.144.1.7 (A:) Titin,  100.0       0       0  382.1  21.8  250  768-1027    4-263 (321)
 22 d1t4ha_ d.144.1.7 (A:) Protein 100.0       0       0  378.0  23.9  249  771-1026   11-270 (270)
 23 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0       0       0  375.3  16.8  250  769-1029    4-262 (273)
 24 d2ozaa1 d.144.1.7 (A:51-385) M 100.0       0       0  377.7  14.1  252  766-1028    8-278 (335)
 25 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0       0       0  366.7  20.1  254  768-1028    1-289 (298)
 26 d1ua2a_ d.144.1.7 (A:) Cell di 100.0       0       0  369.8  17.5  251  772-1028    1-286 (299)
 27 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0       0       0  368.0  17.7  257  768-1030    6-301 (305)
 28 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0       0       0  360.9  22.3  254  767-1031   33-328 (328)
 29 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0       0       0  359.9  21.4  252  765-1022   33-320 (325)
 30 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0       0       0  358.4  21.2  254  768-1030   17-309 (346)
 31 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0       0       0  356.4  20.5  252  768-1025    6-272 (277)
 32 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0       0       0  356.0  20.4  252  768-1027    1-286 (286)
 33 d1opja_ d.144.1.7 (A:) Abelson 100.0       0       0  354.5  20.8  248  765-1018   13-268 (287)
 34 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0       0       0  355.0  20.1  247  769-1028   20-309 (350)
 35 d3blha1 d.144.1.7 (A:8-325) Ce 100.0       0       0  354.7  19.9  254  767-1027    8-310 (318)
 36 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0       0       0  352.8  21.0  248  764-1016   21-283 (299)
 37 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0       0       0  354.8  19.1  253  768-1028   17-307 (348)
 38 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0       0       0  354.7  18.7  255  766-1026    5-272 (285)
 39 d1pmea_ d.144.1.7 (A:) MAP kin 100.0       0       0  351.6  20.3  253  769-1029    8-302 (345)
 40 d1unla_ d.144.1.7 (A:) Cyclin- 100.0       0       0  345.4  24.5  255  768-1028    1-289 (292)
 41 d2b1pa1 d.144.1.7 (A:46-400) c 100.0       0       0  349.8  19.9  253  768-1028   16-317 (355)
 42 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0       0       0  351.3  18.4  249  775-1028   13-272 (277)
 43 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0       0       0  346.6  21.2  246  766-1022    2-255 (263)
 44 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0       0       0  346.4  19.6  250  765-1026    9-269 (272)
 45 d1fmka3 d.144.1.7 (A:249-533)  100.0       0       0  341.9  22.3  253  765-1028   13-275 (285)
 46 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0       0       0  345.1  19.4  246  766-1022    1-254 (258)
 47 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0       0       0  343.3  19.9  254  762-1022    3-279 (309)
 48 d1ywna1 d.144.1.7 (A:818-1166) 100.0       0       0  342.7  20.1  251  766-1022   10-290 (299)
 49 d1xkka_ d.144.1.7 (A:) EGF rec 100.0       0       0  341.7  20.5  248  766-1022    6-266 (317)
 50 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0       0       0  345.7  16.4  248  765-1022    4-266 (276)
 51 d1mqba_ d.144.1.7 (A:) epha2 r 100.0       0       0  338.5  21.7  248  765-1016    3-263 (283)
 52 d1u46a_ d.144.1.7 (A:) Activat 100.0       0       0  339.5  17.7  251  766-1020    5-269 (273)
 53 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0       0       0  335.9  19.2  253  764-1020    8-291 (299)
 54 d1mp8a_ d.144.1.7 (A:) Focal a 100.0       0       0  336.1  18.8  249  765-1022    3-262 (273)
 55 d1lufa_ d.144.1.7 (A:) Musk ty 100.0       0       0  335.5  18.7  250  767-1021   11-297 (301)
 56 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0       0       0  330.2  21.6  253  765-1020   19-302 (311)
 57 d1ckia_ d.144.1.7 (A:) Casein  100.0       0       0  338.3  13.7  252  769-1026    7-279 (299)
 58 d1p4oa_ d.144.1.7 (A:) Insulin 100.0       0       0  330.4  20.1  260  764-1028   15-300 (308)
 59 d1byga_ d.144.1.7 (A:) Carboxy 100.0       0       0  332.5  17.4  242  764-1016    2-250 (262)
 60 d1csna_ d.144.1.7 (A:) Casein  100.0       0       0  325.4  19.1  246  769-1020    5-273 (293)
 61 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0       0       0  317.7  20.3  244  772-1022   30-287 (311)
 62 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0       0       0  316.9  14.6  253  768-1028   12-334 (362)
 63 d1txoa_ d.219.1.1 (A:) putativ 100.0       0       0  301.9  24.9  229   94-388     2-235 (235)
 64 d1vjya_ d.144.1.7 (A:) Type I  100.0       0       0  300.4  18.5  244  768-1021    2-290 (303)
 65 d1cx4a1 b.82.3.2 (A:130-265) R  99.9 6.1E-24 4.5E-28  158.9  16.2  134  458-597     1-134 (136)
 66 d1zara2 d.144.1.9 (A:91-281) R  99.9 5.3E-24 3.8E-28  159.3   7.5  169  771-957     2-190 (191)
 67 d1ne6a1 b.82.3.2 (A:109-244) R  99.9 3.4E-22 2.5E-26  148.3  16.0  129  459-597     6-134 (136)
 68 d1o7fa2 b.82.3.2 (A:13-167) Re  99.9 9.7E-22 7.1E-26  145.6  14.5  138  455-596     6-143 (155)
 69 d1cx4a2 b.82.3.2 (A:266-412) R  99.9   1E-20 7.3E-25  139.5  15.1  124  472-595     1-125 (147)
 70 d1ne6a2 b.82.3.2 (A:245-376) R  99.9 9.3E-21 6.7E-25  139.7  14.6  120  472-596     1-121 (132)
 71 d1o7fa3 b.82.3.2 (A:322-445) R  99.8 2.3E-20 1.7E-24  137.3  13.7  121  464-593     1-123 (124)
 72 d1q3ea_ b.82.3.2 (A:) HCN pace  99.8 1.9E-19 1.4E-23  131.7  13.4  121  468-598    63-183 (193)
 73 d1zyba2 b.82.3.2 (A:1-147) Pro  99.8   4E-19 2.9E-23  129.8  14.7  124  469-597     2-128 (147)
 74 d1wgpa_ b.82.3.2 (A:) Probable  99.8 8.3E-20 6.1E-24  133.9   8.7  115  474-592     7-130 (137)
 75 d1cx4a2 b.82.3.2 (A:266-412) R  99.8 2.4E-19 1.7E-23  131.2  10.3  127  599-740     2-128 (147)
 76 d1vp6a_ b.82.3.2 (A:) Putative  99.8 6.2E-19 4.5E-23  128.7  11.4  116  471-598     9-124 (133)
 77 d1ne6a2 b.82.3.2 (A:245-376) R  99.8 6.8E-19 4.9E-23  128.4  11.0  122  599-741     2-124 (132)
 78 d1ne6a1 b.82.3.2 (A:109-244) R  99.8   1E-18 7.4E-23  127.3  10.8  111  598-734    19-129 (136)
 79 d2gaua2 b.82.3.2 (A:10-151) Tr  99.8 2.3E-18 1.7E-22  125.2  12.1  114  479-597     7-120 (142)
 80 d1cx4a1 b.82.3.2 (A:130-265) R  99.8 2.8E-18   2E-22  124.7  11.9  115  596-732    13-127 (136)
 81 d1o7fa2 b.82.3.2 (A:13-167) Re  99.8   3E-18 2.2E-22  124.5  11.7  137  584-740     3-145 (155)
 82 d1o7fa3 b.82.3.2 (A:322-445) R  99.7 3.4E-17 2.5E-21  118.1  12.8  115  596-735     7-123 (124)
 83 d1wgpa_ b.82.3.2 (A:) Probable  99.7 3.6E-18 2.6E-22  124.0   7.5  115  599-733     6-129 (137)
 84 d1i5za2 b.82.3.2 (A:6-137) Cat  99.7 1.1E-16 7.7E-21  115.1  12.8  109  485-598     2-111 (132)
 85 d2oz6a2 b.82.3.2 (A:9-142) Cyc  99.7 1.9E-16 1.4E-20  113.6  13.3  107  486-597     2-112 (134)
 86 d1q3ea_ b.82.3.2 (A:) HCN pace  99.7 6.4E-17 4.7E-21  116.5  10.3  116  597-738    66-181 (193)
 87 d1vp6a_ b.82.3.2 (A:) Putative  99.7 3.8E-17 2.7E-21  117.9   8.5  115  595-737     7-121 (133)
 88 d1zyba2 b.82.3.2 (A:1-147) Pro  99.7 2.2E-16 1.6E-20  113.2  11.7  120  598-738     5-127 (147)
 89 d3e5ua2 b.82.3.2 (A:9-147) Chl  99.7 1.7E-16 1.3E-20  113.8  10.3  113  477-597     5-117 (139)
 90 d1o5la1 b.82.3.2 (A:1-129) CRP  99.6 4.5E-16 3.2E-20  111.4  10.3  105  488-597     2-107 (129)
 91 d2gaua2 b.82.3.2 (A:10-151) Tr  99.6 5.8E-16 4.2E-20  110.7   8.1  113  605-738     7-119 (142)
 92 d1ft9a2 b.82.3.1 (A:2-133) CO-  99.6 8.8E-16 6.4E-20  109.6   7.7  110  476-598     2-111 (132)
 93 d2zcwa2 b.82.3.2 (A:6-117) Tra  99.6 6.6E-15 4.8E-19  104.3   9.8   90  498-593     2-93  (112)
 94 d1i5za2 b.82.3.2 (A:6-137) Cat  99.6 6.8E-15 4.9E-19  104.2   9.1  107  611-738     2-109 (132)
 95 d2oz6a2 b.82.3.2 (A:9-142) Cyc  99.5 1.4E-14   1E-18  102.3   9.6  105  612-737     2-110 (134)
 96 d1o5la1 b.82.3.2 (A:1-129) CRP  99.5 4.5E-14 3.2E-18   99.3   6.8  102  615-737     3-105 (129)
 97 d2zcwa2 b.82.3.2 (A:6-117) Tra  99.4 7.1E-14 5.2E-18   98.0   7.0   89  623-733     1-91  (112)
 98 d1ft9a2 b.82.3.1 (A:2-133) CO-  99.4 6.4E-14 4.7E-18   98.3   4.8  106  604-738     4-109 (132)
 99 d3e5ua2 b.82.3.2 (A:9-147) Chl  99.4 1.5E-13 1.1E-17   96.1   5.6  108  607-738     9-116 (139)
100 d1j7la_ d.144.1.6 (A:) Type II  98.8 2.8E-08   2E-12   64.2  10.6  141  768-916    13-212 (263)
101 d2pula1 d.144.1.6 (A:5-396) Me  98.4 1.6E-06 1.1E-10   53.6   9.6   82  774-857    31-118 (392)
102 d1nd4a_ d.144.1.6 (A:) Aminogl  98.2   1E-05 7.3E-10   48.7  10.2  135  769-917    11-205 (255)
103 d1nw1a_ d.144.1.8 (A:) Choline  98.0 1.4E-05   1E-09   47.8   8.0   83  765-857    39-128 (395)
104 d2ppqa1 d.144.1.6 (A:5-320) Ho  97.2  0.0004 2.9E-08   39.0   6.1  145  765-916    14-212 (316)
105 d1zyla1 d.144.1.6 (A:4-328) Rd  96.6  0.0019 1.4E-07   34.9   5.8  130  780-916    33-219 (325)
106 d1yhfa1 b.82.1.9 (A:1-112) Hyp  73.6     1.6 0.00012   17.2   8.5   69  495-579    38-106 (112)
107 d2d40a1 b.82.1.23 (A:35-342) G  66.9     2.3 0.00017   16.3   9.7   31  498-528    58-88  (308)
108 d2bnma2 b.82.1.10 (A:77-198) H  49.2     4.6 0.00033   14.5   3.8   64  506-579    56-120 (122)
109 d1lr5a_ b.82.1.2 (A:) Auxin bi  46.2     5.1 0.00037   14.2   4.5   35  623-657    44-78  (160)
110 d2b8ma1 b.82.1.18 (A:1-108) Hy  35.7     7.5 0.00054   13.2   6.2   35  496-530    28-62  (108)
111 d1cjaa_ d.144.1.3 (A:) Actin-f  34.5     7.8 0.00057   13.1   8.7  142  763-915    63-235 (342)
112 d1vj2a_ b.82.1.10 (A:) Hypothe  30.9       9 0.00065   12.7   5.1   36  495-530    37-72  (114)
113 d1y9qa2 b.82.1.15 (A:83-181) P  29.4     9.5 0.00069   12.6   6.7   48  496-554    24-73  (99)
114 d1e7ua4 d.144.1.4 (A:726-1094)  24.9      11 0.00083   12.1   5.7   70  870-941   200-270 (369)
115 d1sefa_ b.82.1.11 (A:) Hypothe  24.3      12 0.00086   12.0   4.6  158  495-696    49-218 (250)
116 d1v70a_ b.82.1.9 (A:) Hypothet  23.4      12 0.00089   11.9   6.8   69  496-579    30-100 (105)
117 d2f4pa1 b.82.1.9 (A:2-135) Hyp  21.7      13 0.00097   11.7   5.1   34  496-529    37-70  (134)
118 d1rc6a_ b.82.1.11 (A:) Hypothe  21.5      13 0.00097   11.7   4.3  158  497-696    54-221 (253)

No 1  
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=444.29  Aligned_cols=288  Identities=27%  Similarity=0.506  Sum_probs=260.1

Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCE
Q ss_conf             55767808998846789489999999499939999994020110202499999998333118986621420289841891
Q 001412          765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH  844 (1082)
Q Consensus       765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~  844 (1082)
                      ++++++|++++.||+|+||.||+|+++.+++.||+|++.+..........++.+|+.+|+.++ ||+|++++++|.+.++
T Consensus         1 ~i~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~   79 (337)
T d1o6la_           1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDR   79 (337)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSE
T ss_pred             CCCHHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCC-CCCEEEEEEEECCCCC
T ss_conf             984474289889831768499999998999899999981565449799999999999998679-9988778764035642


Q ss_pred             EEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCC--
Q ss_conf             899991258889778742--9999999999999999999999987978455699959975799599995278744799--
Q 001412          845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG--  920 (1082)
Q Consensus       845 ~~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~--  920 (1082)
                      +|+||||+.||+|..++.  +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+....  
T Consensus        80 ~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~  159 (337)
T d1o6la_          80 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG  159 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred             CCCCEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCCCCCCCC
T ss_conf             11100035798605555325677599999999999652113431596224647778476589988882056520035678


Q ss_pred             CCCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf             97303752268889023437998984421112377865436999999999997999999850899999999988999999
Q 001412          921 NRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLT 1000 (1082)
Q Consensus       921 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 1000 (1082)
                      ....+.+||+.|+|||++.+.+|+.++|+|||||++|+|++|+.||.+  .+...+++.+....+.+|..+++++++||.
T Consensus       160 ~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~--~~~~~~~~~i~~~~~~~p~~~s~~~~dli~  237 (337)
T d1o6la_         160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN--QDHERLFELILMEEIRFPRTLSPEAKSLLA  237 (337)
T ss_dssp             CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred             CCCCCCEECHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf             620551008899666650489888333102230678899878999999--699999999852899898668999999998


Q ss_pred             HHCCCCCCCCCCCC--CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             83136923339999--9357761999778993110137999990000101114478778
Q 001412         1001 KLLVVDENTRLGSQ--GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSRISQHLDSHFE 1057 (1082)
Q Consensus      1001 ~lL~~dp~~R~s~~--~~~eil~hp~f~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 1057 (1082)
                      +||+.||.+|++..  .+.++++||||.+++|+.+..+..++|..  +.+....+..++
T Consensus       238 ~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i~~~~l~~~~~~~p~~--P~~~~~~~~~~f  294 (337)
T d1o6la_         238 GLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK--PQVTSEVDTRYF  294 (337)
T ss_dssp             HHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCC--CCCSSTTCCTTS
T ss_pred             HHCCCCCHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCC--CCCCCHHHHHHC
T ss_conf             666389344225652349999729150369999998478998978--888980143323


No 2  
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=0  Score=428.01  Aligned_cols=288  Identities=33%  Similarity=0.554  Sum_probs=256.5

Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCE
Q ss_conf             55767808998846789489999999499939999994020110202499999998333118986621420289841891
Q 001412          765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH  844 (1082)
Q Consensus       765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~  844 (1082)
                      ...+++|++++.||+|+||.||+|+++.+++.||+|++.+...........+++|+.+|+.++| |+|++++++|.+...
T Consensus        37 ~~~ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~~~~~~~~~~~  115 (350)
T d1rdqe_          37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVKLEFSFKDNSN  115 (350)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC-TTBCCEEEEEECSSE
T ss_pred             CCCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCC-CCEEECCCCCCCCCC
T ss_conf             8872370898896117680899999989998999999826774588999999999999997487-727403444432222


Q ss_pred             EEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCC
Q ss_conf             899991258889778742--999999999999999999999998797845569995997579959999527874479997
Q 001412          845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNR  922 (1082)
Q Consensus       845 ~~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~~  922 (1082)
                      .|++|||+.||+|..++.  +.+++..++.++.||+.||.|||+++|+||||||+|||++.+|.+||+|||+|+.+.. .
T Consensus       116 ~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~-~  194 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-R  194 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS-C
T ss_pred             CCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHCCCCCCCCEEEEECEEEEECCC-C
T ss_conf             232222334662266675158989999999999999989999859986176799993607789788610103332256-6


Q ss_pred             CEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf             30375226888902343799898442111237786543699999999999799999985089999999998899999983
Q 001412          923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKL 1002 (1082)
Q Consensus       923 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~l 1002 (1082)
                      ..+.+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+  .+....+..|....+.+|..+++++.+||++|
T Consensus       195 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~--~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  272 (350)
T d1rdqe_         195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA--DQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL  272 (350)
T ss_dssp             BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf             6433676356788997179988533114500789999758899899--59999999986179889766899999999998


Q ss_pred             CCCCCCCCCCCC--CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             136923339999--93577619997789931101379999900001011144787789
Q 001412         1003 LVVDENTRLGSQ--GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSRISQHLDSHFED 1058 (1082)
Q Consensus      1003 L~~dp~~R~s~~--~~~eil~hp~f~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 1058 (1082)
                      |..||.+|+...  .+.++++||||++++|+.+..+..++|+.  +......+.++++
T Consensus       273 L~~dP~kR~~~~r~t~~ell~Hp~f~~~~~~~~~~~~~~~p~~--p~~~~~~d~s~~~  328 (350)
T d1rdqe_         273 LQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFI--PKFKGPGDTSNFD  328 (350)
T ss_dssp             SCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCC--CCCCSTTCCTTSC
T ss_pred             HHHCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCC--CCCCCCCHHHHCC
T ss_conf             3409986065534549999719051589989998367896936--8889921133259


No 3  
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=0  Score=425.67  Aligned_cols=275  Identities=31%  Similarity=0.571  Sum_probs=251.7

Q ss_pred             CCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEE
Q ss_conf             57678089988467894899999994999399999940201102024999999983331189866214202898418918
Q 001412          766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA  845 (1082)
Q Consensus       766 ~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~  845 (1082)
                      .++++|++++.||+|+||.||+|+++.+++.||+|++.+.........+.+.+|+.+|+.++| |+|+++++++.+...+
T Consensus         1 ~sl~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~~   79 (316)
T d1fota_           1 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH-PFIIRMWGTFQDAQQI   79 (316)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCB-TTBCCEEEEEECSSEE
T ss_pred             CCHHHEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCC-CCHHHEEEEEEECCEE
T ss_conf             965470888897207680899999989997999999845775488999999999999986369-6753303568528800


Q ss_pred             EEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCC
Q ss_conf             99991258889778742--9999999999999999999999987978455699959975799599995278744799973
Q 001412          846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT  923 (1082)
Q Consensus       846 ~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~~~  923 (1082)
                      |+||||+.|++|..++.  ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.... ..
T Consensus        80 ~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~-~~  158 (316)
T d1fota_          80 FMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-VT  158 (316)
T ss_dssp             EEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS-CB
T ss_pred             EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCHHEEECCCCCEEEECCCCCEEECC-CC
T ss_conf             56765037863223432222111007999999998765541247677055681050386899889831752167124-56


Q ss_pred             EEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
Q ss_conf             03752268889023437998984421112377865436999999999997999999850899999999988999999831
Q 001412          924 FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLL 1003 (1082)
Q Consensus       924 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL 1003 (1082)
                      .+.+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+  .+..+.+..+......+|+.+++++.++|.+||
T Consensus       159 ~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~--~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L  236 (316)
T d1fota_         159 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD--SNTMKTYEKILNAELRFPPFFNEDVKDLLSRLI  236 (316)
T ss_dssp             CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             434576343599998389998043046533368999759899999--699999999970898899778999999999995


Q ss_pred             CCCCCCCCCCC--CHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             36923339999--935776199977899311013799999000
Q 001412         1004 VVDENTRLGSQ--GPTSVKTHPWFRDVDWKGIAESTSPVPHEI 1044 (1082)
Q Consensus      1004 ~~dp~~R~s~~--~~~eil~hp~f~~~~~~~~~~~~~~~p~~~ 1044 (1082)
                      ..||.+|++..  .+.++++||||++++|+.+..+...+|+.+
T Consensus       237 ~~dp~~R~~~~r~t~~~il~Hp~f~~i~~~~l~~~~~~~p~~p  279 (316)
T d1fota_         237 TRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEP  279 (316)
T ss_dssp             CSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHHTTCSCCSCCC
T ss_pred             HHCHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCC
T ss_conf             4499766643102199998193514679899983789969889


No 4  
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=426.62  Aligned_cols=272  Identities=30%  Similarity=0.482  Sum_probs=247.3

Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCE
Q ss_conf             55767808998846789489999999499939999994020110202499999998333118986621420289841891
Q 001412          765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH  844 (1082)
Q Consensus       765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~  844 (1082)
                      ....++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+|+.++| |+|++++++|.+.++
T Consensus         4 ~~~p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~H-pnIv~l~~~~~~~~~   82 (288)
T d1uu3a_           4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLYFTFQDDEK   82 (288)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCS-TTBCCEEEEEECSSE
T ss_pred             CCCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCC-CCEEEEEEEEEECCE
T ss_conf             9899877898898508790999999989997999999865775577789999999999987688-886179999998998


Q ss_pred             EEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC-
Q ss_conf             899991258889778742--99999999999999999999999879784556999599757995999952787447999-
Q 001412          845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN-  921 (1082)
Q Consensus       845 ~~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~-  921 (1082)
                      +|++|||+.||+|.+++.  +.+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+.+... 
T Consensus        83 ~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~  162 (288)
T d1uu3a_          83 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES  162 (288)
T ss_dssp             EEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             EEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEECCCCCCEECCCCC
T ss_conf             89999704898777765315999999999999999999976216508847677412366888538860321024225677


Q ss_pred             ---CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf             ---73037522688890234379989844211123778654369999999999979999998508999999999889999
Q 001412          922 ---RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDL  998 (1082)
Q Consensus       922 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l  998 (1082)
                         ...+.+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+  .+...++..|....+.+|..+++++++|
T Consensus       163 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~--~~~~~~~~~i~~~~~~~p~~~s~~~~~l  240 (288)
T d1uu3a_         163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDL  240 (288)
T ss_dssp             -------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHTTCCCCCTTCCHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf             64333555677552584400268989666230456999998038899899--5999999999718999985479999999


Q ss_pred             HHHHCCCCCCCCCCCCC---HHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             99831369233399999---357761999778993110137999
Q 001412          999 LTKLLVVDENTRLGSQG---PTSVKTHPWFRDVDWKGIAESTSP 1039 (1082)
Q Consensus       999 i~~lL~~dp~~R~s~~~---~~eil~hp~f~~~~~~~~~~~~~~ 1039 (1082)
                      |.+||+.||.+|+|+.+   ...+++||||++++|+.+.++++|
T Consensus       241 i~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~~l~~~~pP  284 (288)
T d1uu3a_         241 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP  284 (288)
T ss_dssp             HHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCCC
T ss_pred             HHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCCHHHHHCCCCC
T ss_conf             99985579768919789737789876976478998896157999


No 5  
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=0  Score=422.14  Aligned_cols=277  Identities=26%  Similarity=0.449  Sum_probs=243.4

Q ss_pred             CCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHH---HHHHCCCCCCCCCCCEEEEEEEC
Q ss_conf             576780899884678948999999949993999999402011020249999999---83331189866214202898418
Q 001412          766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKE---KNLMKSVSPSACVPQILCTCADS  842 (1082)
Q Consensus       766 ~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E---~~il~~l~~~~~I~~l~~~~~~~  842 (1082)
                      +++++|++++.||+|+||.||+|+++.+++.||+|++.+..+........+.+|   ..+++.+ +||+|++++++|.+.
T Consensus         1 lslddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~-~hpnIv~l~~~~~~~   79 (364)
T d1omwa3           1 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTP   79 (364)
T ss_dssp             CCSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECS
T ss_pred             CCHHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCC-CCCCEEEEEEEEEEC
T ss_conf             9777685101884288909999999999979999998458754266799999999999998508-998588999999989


Q ss_pred             CEEEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCC
Q ss_conf             91899991258889778742--9999999999999999999999987978455699959975799599995278744799
Q 001412          843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG  920 (1082)
Q Consensus       843 ~~~~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~  920 (1082)
                      +.+|+||||+.|++|..++.  ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+..
T Consensus        80 ~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~  159 (364)
T d1omwa3          80 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK  159 (364)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred             CEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCEEEEEECEEEECCC
T ss_conf             98899999148983899987325532789999999999999999977962204442216785889679822010233378


Q ss_pred             CCCEEEEECCCCCCHHHHCC-CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC-HHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf             97303752268889023437-99898442111237786543699999999999-79999998508999999999889999
Q 001412          921 NRTFTICGMADYLAPEIVQG-KGHGLAADWWALGVLIYFMLQGEMPFGSWRES-EIDIVAKIAKGQLSLPQNLSPEAVDL  998 (1082)
Q Consensus       921 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~~~i~~~~~~~p~~~s~~~~~l  998 (1082)
                      ......+||+.|+|||++.. ..++.++|||||||++|+|++|+.||.+.... .......+......+|..+++++++|
T Consensus       160 ~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  239 (364)
T d1omwa3         160 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL  239 (364)
T ss_dssp             SCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHH
T ss_pred             CCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf             86433113455421687603899984410467789999998599988889989999999860468887887789999999


Q ss_pred             HHHHCCCCCCCCCCCC--CHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9983136923339999--93577619997789931101379999900
Q 001412          999 LTKLLVVDENTRLGSQ--GPTSVKTHPWFRDVDWKGIAESTSPVPHE 1043 (1082)
Q Consensus       999 i~~lL~~dp~~R~s~~--~~~eil~hp~f~~~~~~~~~~~~~~~p~~ 1043 (1082)
                      |.+||..||.+||++.  .+.++++||||++++|..+..+..++|..
T Consensus       240 i~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~~~~~~~~~~~p~~  286 (364)
T d1omwa3         240 LEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLI  286 (364)
T ss_dssp             HHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCHHHHHTTCSCCSCC
T ss_pred             HHHHCCCCHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCC
T ss_conf             99985669888088743579999749102378987996288995937


No 6  
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=421.10  Aligned_cols=285  Identities=28%  Similarity=0.503  Sum_probs=252.4

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEE
Q ss_conf             67808998846789489999999499939999994020110202499999998333118986621420289841891899
Q 001412          768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL  847 (1082)
Q Consensus       768 ~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~l  847 (1082)
                      +++|++++.||+|+||+||+|+++.+++.||+|++.+...........++.|..++....+||+|+++++++.++.++|+
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yi   80 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF   80 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             CCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEE
T ss_conf             99718865894087828999999999989999998055533848999999999999984799968789889704983167


Q ss_pred             EEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCC--CCC
Q ss_conf             991258889778742--9999999999999999999999987978455699959975799599995278744799--973
Q 001412          848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG--NRT  923 (1082)
Q Consensus       848 v~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~--~~~  923 (1082)
                      ||||+.||+|..++.  ..+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++....  ...
T Consensus        81 vmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~  160 (320)
T d1xjda_          81 VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT  160 (320)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred             EEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEECCCCCHHHHCCCCCCCC
T ss_conf             77503798089986404789999999999999999999986893403476540444489963015553023235665334


Q ss_pred             EEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
Q ss_conf             03752268889023437998984421112377865436999999999997999999850899999999988999999831
Q 001412          924 FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKLL 1003 (1082)
Q Consensus       924 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL 1003 (1082)
                      ...+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+  .+...++..+....+.+|..+++++.+||.+||
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~--~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~~L  238 (320)
T d1xjda_         161 NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG--QDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLF  238 (320)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
T ss_conf             545787776899998279988323201122789898738899999--899999999971899897567999999999965


Q ss_pred             CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             3692333999993577619997789931101379999900001011144787789
Q 001412         1004 VVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSRISQHLDSHFED 1058 (1082)
Q Consensus      1004 ~~dp~~R~s~~~~~eil~hp~f~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 1058 (1082)
                      ..||.+||++.  .++++||||++++|+.+..++.++|..  +++....+..+++
T Consensus       239 ~~dP~~R~s~~--~~l~~hpff~~~~~~~l~~~~~~pp~~--p~~~~~~d~~~f~  289 (320)
T d1xjda_         239 VREPEKRLGVR--GDIRQHPLFREINWEELERKEIDPPFR--PKVKSPFDCSNFD  289 (320)
T ss_dssp             CSSGGGSBTTB--SCGGGSGGGTTCCHHHHHTTCSCC------------------
T ss_pred             CCCCCCCCCHH--HHHHHCCHHCCCCHHHHHHCCCCCCCC--CCCCCCCCHHHCC
T ss_conf             44898783889--999809013158999998368998977--9789964124429


No 7  
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=415.94  Aligned_cols=257  Identities=26%  Similarity=0.433  Sum_probs=240.2

Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCE
Q ss_conf             55767808998846789489999999499939999994020110202499999998333118986621420289841891
Q 001412          765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH  844 (1082)
Q Consensus       765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~  844 (1082)
                      ..++++|++.+.||+|+||.||+++++.+++.||+|++.+...........+.+|+.+++.++| |+|+++++++.+...
T Consensus         2 ~~~l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~~~~~~~~~~~   80 (263)
T d2j4za1           2 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDATR   80 (263)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC-TTBCCEEEEEECSSE
T ss_pred             CCCHHHEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCC-CCCCEEEEEEEECCE
T ss_conf             7615376998898517785899999989994999999816885676899999999999985688-888859999998999


Q ss_pred             EEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCC
Q ss_conf             899991258889778742--999999999999999999999998797845569995997579959999527874479997
Q 001412          845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNR  922 (1082)
Q Consensus       845 ~~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~~  922 (1082)
                      .|+||||+.||+|.+++.  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+......
T Consensus        81 ~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~  160 (263)
T d2j4za1          81 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR  160 (263)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCC
T ss_pred             EEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCEEECCCCEEEECCCCC
T ss_conf             89998504798589887504899999999999999999999998894652202344146689987115556335448885


Q ss_pred             CEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf             30375226888902343799898442111237786543699999999999799999985089999999998899999983
Q 001412          923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTKL 1002 (1082)
Q Consensus       923 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~l 1002 (1082)
                      ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+  .+..+.+..+.+..+.+|..+++++++||.+|
T Consensus       161 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~--~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  238 (263)
T d2j4za1         161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGARDLISRL  238 (263)
T ss_dssp             CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf             2355788763499997589989314404675999998329999888--99999999997189999866899999999997


Q ss_pred             CCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf             1369233399999357761999778
Q 001412         1003 LVVDENTRLGSQGPTSVKTHPWFRD 1027 (1082)
Q Consensus      1003 L~~dp~~R~s~~~~~eil~hp~f~~ 1027 (1082)
                      |+.||.+||++.   ++++||||..
T Consensus       239 L~~dp~~R~t~~---eil~hp~~~~  260 (263)
T d2j4za1         239 LKHNPSQRPMLR---EVLEHPWITA  260 (263)
T ss_dssp             TCSSGGGSCCHH---HHHTCHHHHH
T ss_pred             CCCCHHHCCCHH---HHHCCCCCCC
T ss_conf             647976890999---9971907078


No 8  
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=0  Score=396.22  Aligned_cols=258  Identities=22%  Similarity=0.355  Sum_probs=231.0

Q ss_pred             CCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEE
Q ss_conf             76780899884678948999999949993999999402011020249999999833311898662142028984189189
Q 001412          767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG  846 (1082)
Q Consensus       767 ~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~  846 (1082)
                      -+++|++++.||+|+||.||+|.++.+++.||+|++.+...   ...+.+.+|+.+|+.++| ++|++++++|.+...+|
T Consensus        24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~---~~~~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~~~   99 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQTMSVLRH-PTLVNLHDAFEDDNEMV   99 (350)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSH---HHHHHHHHHHHHHHHTCC-TTBCCEEEEEEETTEEE
T ss_pred             CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCH---HHHHHHHHHHHHHHHCCC-CCCCCEEEEEEECCEEE
T ss_conf             86575898898407681999999889998999999845243---169999999999986799-79992999999899999


Q ss_pred             EEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEC--CCCCEEEEECCCCCCCCCC
Q ss_conf             9991258889778742---9999999999999999999999987978455699959975--7995999952787447999
Q 001412          847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD--KSGHLQLVDFRFGKGLSGN  921 (1082)
Q Consensus       847 lv~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid--~~g~vkL~DFg~a~~~~~~  921 (1082)
                      +||||+.||+|.+++.   +.+++..++.++.||+.||.|||++||+||||||+|||++  .++.+||+|||+++.+...
T Consensus       100 ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~  179 (350)
T d1koaa2         100 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  179 (350)
T ss_dssp             EEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT
T ss_pred             EEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHEEECCCCCCEEEEEECCHHEECCCC
T ss_conf             99985799889999976237899999999999999999999756976000154673641688986999545210442565


Q ss_pred             -CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC----CCCCHHHH
Q ss_conf             -7303752268889023437998984421112377865436999999999997999999850899999----99998899
Q 001412          922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLP----QNLSPEAV  996 (1082)
Q Consensus       922 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p----~~~s~~~~  996 (1082)
                       ...+.+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+  .+..+.+..|......++    ..++++++
T Consensus       180 ~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~--~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  257 (350)
T d1koaa2         180 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG--ENDDETLRNVKSCDWNMDDSAFSGISEDGK  257 (350)
T ss_dssp             SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCSCCGGGGGCCHHHH
T ss_pred             CCCCEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf             432000686242188997589987267655465999999859899899--799999999984788989422358999999


Q ss_pred             HHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
Q ss_conf             9999831369233399999357761999778993110
Q 001412          997 DLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGI 1033 (1082)
Q Consensus       997 ~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~~~~~~ 1033 (1082)
                      +||.+||..||.+|||+.   ++|+||||+...|...
T Consensus       258 ~li~~~L~~dP~~R~t~~---eil~hp~~~~~~~~~~  291 (350)
T d1koaa2         258 DFIRKLLLADPNTRMTIH---QALEHPWLTPGNAPGR  291 (350)
T ss_dssp             HHHHHHCCSSGGGSCCHH---HHHHSTTTSCTTCCSC
T ss_pred             HHHHHHCCCCHHHCCCHH---HHHCCCCCCCCCCCCC
T ss_conf             999997568966790899---9862913288988875


No 9  
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=0  Score=396.36  Aligned_cols=254  Identities=20%  Similarity=0.333  Sum_probs=227.8

Q ss_pred             CCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEE
Q ss_conf             76780899884678948999999949993999999402011020249999999833311898662142028984189189
Q 001412          767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG  846 (1082)
Q Consensus       767 ~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~  846 (1082)
                      .+++|++++.||+|+||.||+|.++.+++.||+|++.+...   .....+.+|+.+|+.++| |+|++++++|.++..+|
T Consensus        27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~H-pnIv~~~~~~~~~~~~~  102 (352)
T d1koba_          27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP---LDKYTVKNEISIMNQLHH-PKLINLHDAFEDKYEMV  102 (352)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCS-TTBCCEEEEEECSSEEE
T ss_pred             CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCH---HHHHHHHHHHHHHHHCCC-CCCCCEEEEEEECCEEE
T ss_conf             54035998999317782999999989997999999887264---679999999999986799-79891999999899999


Q ss_pred             EEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEC--CCCCEEEEECCCCCCCCCC
Q ss_conf             9991258889778742---9999999999999999999999987978455699959975--7995999952787447999
Q 001412          847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD--KSGHLQLVDFRFGKGLSGN  921 (1082)
Q Consensus       847 lv~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid--~~g~vkL~DFg~a~~~~~~  921 (1082)
                      +||||+.|++|.+.+.   .++++.+++.++.||+.||.|||++||+||||||+|||++  .++.+||+|||+|+.+...
T Consensus       103 ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~  182 (352)
T d1koba_         103 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  182 (352)
T ss_dssp             EEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             EEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEEEEECCCCEECCCC
T ss_conf             99982899808888986389989999999999999999999977926513144553113467884899525630343788


Q ss_pred             -CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC----CCCCHHHH
Q ss_conf             -7303752268889023437998984421112377865436999999999997999999850899999----99998899
Q 001412          922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLP----QNLSPEAV  996 (1082)
Q Consensus       922 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p----~~~s~~~~  996 (1082)
                       ...+.+||+.|+|||++.+..++.++|||||||++|+|++|..||.+  .+....+..+......++    ..+++++.
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~--~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  260 (352)
T d1koba_         183 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG--EDDLETLQNVKRCDWEFDEDAFSSVSPEAK  260 (352)
T ss_dssp             SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC--SSHHHHHHHHHHCCCCCCSSTTTTSCHHHH
T ss_pred             CCEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf             720100476453489997479989763338989999999968899899--799999999984788989300247999999


Q ss_pred             HHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf             999983136923339999935776199977899
Q 001412          997 DLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029 (1082)
Q Consensus       997 ~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~~ 1029 (1082)
                      +||.+||+.||.+||++.   ++|+||||++..
T Consensus       261 ~li~~~L~~dp~~R~s~~---eil~Hp~~~~~~  290 (352)
T d1koba_         261 DFIKNLLQKEPRKRLTVH---DALEHPWLKGDH  290 (352)
T ss_dssp             HHHHTTSCSSGGGSCCHH---HHHTSTTTSSCC
T ss_pred             HHHHHHCCCCHHHCCCHH---HHHCCHHHCCCC
T ss_conf             999997569966891899---996097348882


No 10 
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=394.98  Aligned_cols=268  Identities=24%  Similarity=0.406  Sum_probs=229.1

Q ss_pred             CCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCC-CCCCEEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf             865999982266239981389999841534799999987542886268889-8984699994289927089999999999
Q 001412           76 QFLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGT-SQDDHFFGVFDGHGEFGAQCSQFVKRKL  154 (1082)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~-~~~~~~f~V~DGhG~~G~~aa~~~~~~l  154 (1082)
                      .||+.|.+.+......+..++|+++|++|+     |..|||++.+...... ..++.|||||||||  |+.||+|+++++
T Consensus         2 ~~l~~p~~~k~~~~~~~~~~~~g~~s~~G~-----R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhG--G~~~s~~~~~~l   74 (295)
T d1a6qa2           2 AFLDKPKMEKHNAQGQGNGLRYGLSSMQGW-----RVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHL   74 (295)
T ss_dssp             CCCSSCEEEEEEEEEEETTEEEEEEEEEET-----SSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCEEEEEEECCCC-----CCCCCCEEEEECCCCCCCCCEEEEEEEECCC--CHHHHHHHHHHH
T ss_conf             989998864475425689568999837218-----8744370499705688987607999995999--818999999999


Q ss_pred             HHHHHHCC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEEEC
Q ss_conf             99998337--------960469999999999872977633---2898888741899999599899996376558999742
Q 001412          155 CENLLRNN--------KFHEDAVDACHSSYLTTNSQLHAD---VLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERR  223 (1082)
Q Consensus       155 ~~~l~~~~--------~~~~~~~~~l~~a~~~~~~~~~~~---~~~~~~~GtTa~~~~i~~~~l~vanvGDSRa~l~~~~  223 (1082)
                      ++.+.+..        ....++.+++..+|.++++.+...   ......|||||+++++.++++|||||||||||+++++
T Consensus        75 ~~~l~~~~~~~~~~~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~  154 (295)
T d1a6qa2          75 LDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR  154 (295)
T ss_dssp             HHHHHTSHHHHCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT
T ss_pred             HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEECC
T ss_conf             99999755421345651589999999999999998876655404576779975999994288999995578769986034


Q ss_pred             CCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf             98368770999889999539999998197597402223677988545788889999999343108864763222445744
Q 001412          224 GKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDS  303 (1082)
Q Consensus       224 ~~~~~~~~lt~DH~~~~~~E~~ri~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~tRslGd~  303 (1082)
                          .+.+||.||+|.++.|+.||..+||.+..                               .+..+.|++||||||.
T Consensus       155 ----~~~~lT~dH~~~~~~E~~Ri~~~gg~v~~-------------------------------~r~~g~l~~tRa~Gd~  199 (295)
T d1a6qa2         155 ----KVHFFTQDHKPSNPLEKERIQNAGGSVMI-------------------------------QRVNGSLAVSRALGDF  199 (295)
T ss_dssp             ----EEEEECCCCCTTSHHHHHHHHHTTCCEET-------------------------------TEETTTBSCSBCEECG
T ss_pred             ----CCEEECCCCCCCCHHHHHHHHHCCCCCCC-------------------------------CCCCCCEEEEECCCCH
T ss_conf             ----40110145675318787567644774102-------------------------------4438842011316767


Q ss_pred             CCCCC--------CEEEECCEEEEECC-CCCCEEEEECCCCCCCCCHHHHHHHHHC----CCCHHHHHHHHHHHHHHHHH
Q ss_conf             66656--------83530416999908-9988999982763112464789999870----59988999999999999998
Q 001412          304 IAETI--------GVVANPEIVVWELT-NDHPFFVLASDGVFEFLSSQAVVDMVAK----YKDPRDACAAIVAESYRLWL  370 (1082)
Q Consensus       304 ~~k~~--------~v~~~P~v~~~~l~-~~d~fliL~SDGl~d~ls~~ei~~~v~~----~~~~~~~~~~lv~~a~~~~~  370 (1082)
                      .+|..        .|+++|+|..+.+. ++|+|||||||||||+++++|+++++..    ..+++.+|+.|+++|+.   
T Consensus       200 ~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~---  276 (295)
T d1a6qa2         200 DYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLY---  276 (295)
T ss_dssp             GGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH---
T ss_pred             HHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH---
T ss_conf             76403556754333244454048885014003676645754346899999999999864689899999999999986---


Q ss_pred             HHCCCCCCEEEEEEECCCCC
Q ss_conf             31799999499999937976
Q 001412          371 QYETRTDDITVIVVHINGLK  390 (1082)
Q Consensus       371 ~~~~~~DniT~ivv~~~~~~  390 (1082)
                        +++.||||||||+|++.|
T Consensus       277 --~gs~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         277 --KGSRDNMSVILICFPNAP  294 (295)
T ss_dssp             --TTCCSCEEEEEEECTTSC
T ss_pred             --CCCCCCEEEEEEECCCCC
T ss_conf             --499888699999636889


No 11 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=394.55  Aligned_cols=267  Identities=22%  Similarity=0.325  Sum_probs=236.6

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHC---CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEE
Q ss_conf             78089988467894899999994999399999940201102---024999999983331189866214202898418918
Q 001412          769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC---LGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA  845 (1082)
Q Consensus       769 ~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~---~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~  845 (1082)
                      ++|++.+.||+|+||.||+|+++.+++.||+|++.+.....   ....+.+.+|+.+|+.++| |+|++++++|.+...+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~~   88 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH-PNVITLHEVYENKTDV   88 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCC-TTBCCEEEEEECSSEE
T ss_pred             CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCC-CCCCCEEEEEEECCEE
T ss_conf             677982798117895999999999998999999875663213406899999999999986799-8999388999979989


Q ss_pred             EEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC----CEEEEECCCCCCCC
Q ss_conf             99991258889778742--9999999999999999999999987978455699959975799----59999527874479
Q 001412          846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG----HLQLVDFRFGKGLS  919 (1082)
Q Consensus       846 ~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g----~vkL~DFg~a~~~~  919 (1082)
                      |+||||+.||+|.+++.  +.+++..++.++.|++.||.|||+++|+||||||+|||++.++    .+||+|||+++...
T Consensus        89 ~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~  168 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID  168 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECT
T ss_pred             EEEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCCCEEECCHHHHHHCC
T ss_conf             99998677864310010356421557899999999998766625422113330127982589866646964334421057


Q ss_pred             C-CCCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC----CCCCHH
Q ss_conf             9-97303752268889023437998984421112377865436999999999997999999850899999----999988
Q 001412          920 G-NRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLP----QNLSPE  994 (1082)
Q Consensus       920 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p----~~~s~~  994 (1082)
                      . ....+.+||+.|+|||++.+..++.++||||+||++|+|++|+.||.+  .+..+.+..+......++    +.++.+
T Consensus       169 ~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~--~~~~~~~~~i~~~~~~~~~~~~~~~s~~  246 (293)
T d1jksa_         169 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG--DTKQETLANVSAVNYEFEDEYFSNTSAL  246 (293)
T ss_dssp             TSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHTTCCCCCHHHHTTSCHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC--CCHHHHHHHHHHCCCCCCCHHCCCCCHH
T ss_conf             77631224777743099998189999766522140999999708899889--9999999999816888870104788999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999983136923339999935776199977899311013799999
Q 001412          995 AVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSPVP 1041 (1082)
Q Consensus       995 ~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~~~~~~~~~~~~~p 1041 (1082)
                      +++||++||..||.+||++.   ++++||||++.+|.........+|
T Consensus       247 ~~~li~~~L~~dP~~R~s~~---eil~hp~~~~~~~~~~l~~~~~~P  290 (293)
T d1jksa_         247 AKDFIRRLLVKDPKKRMTIQ---DSLQHPWIKPKDTQQALSSAWSHP  290 (293)
T ss_dssp             HHHHHHTTSCSSGGGSCCHH---HHHHSTTTCC-------------C
T ss_pred             HHHHHHHHCCCCHHHCCCHH---HHHCCCCCCCCCHHHHHCCCCCCC
T ss_conf             99999998638966891999---996190418887057645688992


No 12 
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=398.94  Aligned_cols=250  Identities=21%  Similarity=0.319  Sum_probs=222.7

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEE
Q ss_conf             78089988467894899999994999399999940201102024999999983331189866214202898418918999
Q 001412          769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL  848 (1082)
Q Consensus       769 ~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~lv  848 (1082)
                      ++|++++.||+|+||.||+|.++.+++.||+|++.+...   ...+.+.+|+.+|+.++| |+|++++++|.+.+++|+|
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~~~iv   95 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKN-PNIVNYLDSYLVGDELWVV   95 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCCC-TTBCCEEEEEEETTEEEEE
T ss_pred             CCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCC---HHHHHHHHHHHHHHHCCC-CCEEEEEEEEEECCEEEEE
T ss_conf             053887898128582999999989998999999843017---279999999999986799-9880585779889998999


Q ss_pred             EECCCCCCHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCC--CCCEE
Q ss_conf             91258889778742-9999999999999999999999987978455699959975799599995278744799--97303
Q 001412          849 LNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG--NRTFT  925 (1082)
Q Consensus       849 ~E~~~g~~L~~~l~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~--~~~~~  925 (1082)
                      |||+.|++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+..  .....
T Consensus        96 mEy~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~  175 (293)
T d1yhwa1          96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST  175 (293)
T ss_dssp             EECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred             EEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCHHHEEECCCCCCCCC
T ss_conf             97037980898864159999999999999999999999879722677688868878996864251564132136664444


Q ss_pred             EEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC---CCCCCCCCCHHHHHHHHHH
Q ss_conf             7522688890234379989844211123778654369999999999979999998508---9999999998899999983
Q 001412          926 ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG---QLSLPQNLSPEAVDLLTKL 1002 (1082)
Q Consensus       926 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~l 1002 (1082)
                      .+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+  .+.......+...   .+..|..+++++++||.+|
T Consensus       176 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~  253 (293)
T d1yhwa1         176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN--ENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC  253 (293)
T ss_dssp             CCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTT--SCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHCCCCCCCHHCEEHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             4447773682664479988012031372999998048899899--79999999998579998888553799999999998


Q ss_pred             CCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf             1369233399999357761999778
Q 001412         1003 LVVDENTRLGSQGPTSVKTHPWFRD 1027 (1082)
Q Consensus      1003 L~~dp~~R~s~~~~~eil~hp~f~~ 1027 (1082)
                      |..||.+||++.   ++|+||||+.
T Consensus       254 L~~dP~~R~s~~---eil~Hp~~~~  275 (293)
T d1yhwa1         254 LDMDVEKRGSAK---ELLQHQFLKI  275 (293)
T ss_dssp             TCSSTTTSCCHH---HHTTCGGGGG
T ss_pred             CCCCHHHCCCHH---HHHCCHHHCC
T ss_conf             669966890999---9964996577


No 13 
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=399.25  Aligned_cols=262  Identities=18%  Similarity=0.269  Sum_probs=223.3

Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCE
Q ss_conf             55767808998846789489999999499939999994020110202499999998333118986621420289841891
Q 001412          765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH  844 (1082)
Q Consensus       765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~  844 (1082)
                      .+..++|++++.||+|+||.||++.++.++..||+|++.+..  .......+.+|+.+|+.++| |+|++++++|.+...
T Consensus         2 el~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l~H-pnIv~l~~~~~~~~~   78 (322)
T d1s9ja_           2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNS-PYIVGFYGAFYSDGE   78 (322)
T ss_dssp             CCCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC--CTTHHHHHHHHGGGGGGCCC-TTBCCEEEEEECSSE
T ss_pred             CCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHH--CHHHHHHHHHHHHHHHHCCC-CCCCCEEEEEEECCE
T ss_conf             787568889789712778099999998999699999987540--97899999999999986799-999949999998999


Q ss_pred             EEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHH-CCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC
Q ss_conf             899991258889778742--999999999999999999999998-79784556999599757995999952787447999
Q 001412          845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN  921 (1082)
Q Consensus       845 ~~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~-~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~  921 (1082)
                      +|+||||+.|++|..++.  +.+++..++.++.|++.||.|||+ +||+||||||+|||++.+|.+||+|||+|+.+...
T Consensus        79 ~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~  158 (322)
T d1s9ja_          79 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  158 (322)
T ss_dssp             EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred             EEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEEECCCCCCCCCC
T ss_conf             99999767998689987424999999999999999999999998599971445779946878998999548776256788


Q ss_pred             CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHH-------------------------
Q ss_conf             7303752268889023437998984421112377865436999999999997999-------------------------
Q 001412          922 RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDI-------------------------  976 (1082)
Q Consensus       922 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~-------------------------  976 (1082)
                      ...+.+||+.|+|||++.+..|+.++||||+||++|+|++|+.||.+........                         
T Consensus       159 ~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (322)
T d1s9ja_         159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS  238 (322)
T ss_dssp             TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-----------------------
T ss_pred             CCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf             62111377141194687589989488899899999999988899899887899999988751775457742123332211


Q ss_pred             ---------------HHHHHHC-CCCCC-CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
Q ss_conf             ---------------9998508-99999-99998899999983136923339999935776199977899311
Q 001412          977 ---------------VAKIAKG-QLSLP-QNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKG 1032 (1082)
Q Consensus       977 ---------------~~~i~~~-~~~~p-~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~~~~~ 1032 (1082)
                                     ...+... ...+| ..++.++.+||.+||+.||.+|||+.   ++|+||||+..+|+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~---e~L~Hpf~~~~~~~~  308 (322)
T d1s9ja_         239 SYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK---QLMVHAFIKRSDAEE  308 (322)
T ss_dssp             -------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHH---HHHTSHHHHHHHHSC
T ss_pred             CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHHCHHHCCCCCCC
T ss_conf             1122235413477887665026876676444899999999998689946790899---996098647698231


No 14 
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=0  Score=393.85  Aligned_cols=252  Identities=22%  Similarity=0.363  Sum_probs=225.7

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEE
Q ss_conf             78089988467894899999994999399999940201102024999999983331189866214202898418918999
Q 001412          769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL  848 (1082)
Q Consensus       769 ~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~lv  848 (1082)
                      +.|++.+.||+|+||.||+|+++.+++.||+|++.+.....  ....+.+|+.+|+.++| |+|++++++|.++.++|++
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~Ei~il~~l~H-pnIv~l~~~~~~~~~~~lv   85 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG--KEGSMENEIAVLHKIKH-PNIVALDDIYESGGHLYLI   85 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTCCC-TTBCCEEEEEECSSEEEEE
T ss_pred             CCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECHHHHHH--HHHHHHHHHHHHHHCCC-CCCCCEEEEEEECCEEEEE
T ss_conf             66699889940658399999999999899999981577312--89999999999986799-8999198999989988898


Q ss_pred             EECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEC---CCCCEEEEECCCCCCCCCC-C
Q ss_conf             91258889778742--9999999999999999999999987978455699959975---7995999952787447999-7
Q 001412          849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGKGLSGN-R  922 (1082)
Q Consensus       849 ~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid---~~g~vkL~DFg~a~~~~~~-~  922 (1082)
                      |||+.|++|.+++.  +.+++..++.++.||+.||.|||++||+||||||+|||+.   .++.+||+|||+|+..... .
T Consensus        86 mE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~  165 (307)
T d1a06a_          86 MQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV  165 (307)
T ss_dssp             ECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-----------
T ss_pred             EECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEECCCCCCCEEEEECCCEEEECCCCCE
T ss_conf             85268984888653036788789999999999998752413055687046300110468882499831543587258970


Q ss_pred             CEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC----CCCCHHHHHH
Q ss_conf             303752268889023437998984421112377865436999999999997999999850899999----9999889999
Q 001412          923 TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLP----QNLSPEAVDL  998 (1082)
Q Consensus       923 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~l  998 (1082)
                      ..+.+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+  .........+......++    +.+++++.+|
T Consensus       166 ~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~--~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  243 (307)
T d1a06a_         166 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD--ENDAKLFEQILKAEYEFDSPYWDDISDSAKDF  243 (307)
T ss_dssp             -------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHH
T ss_pred             EEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf             4400328422591887379998078734515999999859799999--89999999986168777876666789999999


Q ss_pred             HHHHCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf             998313692333999993577619997789
Q 001412          999 LTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028 (1082)
Q Consensus       999 i~~lL~~dp~~R~s~~~~~eil~hp~f~~~ 1028 (1082)
                      |.+||..||.+||++.   ++++||||++.
T Consensus       244 i~~~L~~dP~~R~s~~---eil~hp~~~~~  270 (307)
T d1a06a_         244 IRHLMEKDPEKRFTCE---QALQHPWIAGD  270 (307)
T ss_dssp             HHHHSCSSGGGSCCHH---HHHHSTTTTSS
T ss_pred             HHHHCCCCHHHCCCHH---HHHCCHHHCCC
T ss_conf             9997608975791899---98629844799


No 15 
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=395.74  Aligned_cols=253  Identities=21%  Similarity=0.328  Sum_probs=217.8

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEE
Q ss_conf             67808998846789489999999499939999994020110202499999998333118986621420289841891899
Q 001412          768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL  847 (1082)
Q Consensus       768 ~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~l  847 (1082)
                      +++|++++.||+|+||.||+|+++.+++.||+|++.+....  ...+.+.+|+.+|+.++| |+|+++++++.+...+|+
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~--~~~~~~~~Ei~~l~~l~H-pnIv~~~~~~~~~~~~~i   80 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNH-ENVVKFYGHRREGNIQYL   80 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTCCC-TTBCCEEEEEEETTEEEE
T ss_pred             CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC--HHHHHHHHHHHHHHHCCC-CCEEEEEEEECCCCEEEE
T ss_conf             74608998972174809999999999979999998456641--279999999999985799-888469654046743679


Q ss_pred             EEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC----
Q ss_conf             991258889778742--99999999999999999999999879784556999599757995999952787447999----
Q 001412          848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN----  921 (1082)
Q Consensus       848 v~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~----  921 (1082)
                      ||||+.||+|.+++.  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.+...    
T Consensus        81 vmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~  160 (271)
T d1nvra_          81 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  160 (271)
T ss_dssp             EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             EEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCHHHEEECCCCCCC
T ss_conf             88645898089997537999999999999999999999997598357546899788789987983231422404688653


Q ss_pred             CCEEEEECCCCCCHHHHCCCCC-CCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC--CCCCCCCHHHHHH
Q ss_conf             7303752268889023437998-984421112377865436999999999997999999850899--9999999889999
Q 001412          922 RTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQL--SLPQNLSPEAVDL  998 (1082)
Q Consensus       922 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~l  998 (1082)
                      ...+.+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||......... +..+.....  .....+++++.+|
T Consensus       161 ~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~l  239 (271)
T d1nvra_         161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKKTYLNPWKKIDSAPLAL  239 (271)
T ss_dssp             CBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHH-HHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred             CCCCEEECCCCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHH-HHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf             1113255747428728618999997101617379999998299788889859999-999863888788644699999999


Q ss_pred             HHHHCCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf             99831369233399999357761999778
Q 001412          999 LTKLLVVDENTRLGSQGPTSVKTHPWFRD 1027 (1082)
Q Consensus       999 i~~lL~~dp~~R~s~~~~~eil~hp~f~~ 1027 (1082)
                      |.+||+.||++||++.   ++++||||+.
T Consensus       240 i~~~L~~dP~~R~t~~---eil~hpwf~~  265 (271)
T d1nvra_         240 LHKILVENPSARITIP---DIKKDRWYNK  265 (271)
T ss_dssp             HHHHSCSSTTTSCCHH---HHTTCTTTTC
T ss_pred             HHHHCCCCHHHCCCHH---HHHCCHHHCC
T ss_conf             9997679966890999---9961984585


No 16 
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=387.66  Aligned_cols=252  Identities=20%  Similarity=0.317  Sum_probs=224.5

Q ss_pred             CCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE--CCE
Q ss_conf             767808998846789489999999499939999994020110202499999998333118986621420289841--891
Q 001412          767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMH  844 (1082)
Q Consensus       767 ~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~--~~~  844 (1082)
                      +.++|++++.||+|+||.||+++++.+++.||+|++.+.... ......+.+|+.+|+.++| |+|+++++++.+  +..
T Consensus         2 r~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~~~   79 (269)
T d2java1           2 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKH-PNIVRYYDRIIDRTNTT   79 (269)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSC-HHHHHHHHHHHHHTTSCCC-TTBCCEEEEEEC----C
T ss_pred             CCHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCC-HHHHHHHHHHHHHHHHCCC-CCEEEEEEEEEECCCCE
T ss_conf             733379967983088919999999999979999998746579-7999999999999997789-99824899999178998


Q ss_pred             EEEEEECCCCCCHHHHHC------CCCCHHHHHHHHHHHHHHHHHHHHCC-----CEECCCCCCCEEECCCCCEEEEECC
Q ss_conf             899991258889778742------99999999999999999999999879-----7845569995997579959999527
Q 001412          845 AGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRG-----VLYRGVSPDVLMLDKSGHLQLVDFR  913 (1082)
Q Consensus       845 ~~lv~E~~~g~~L~~~l~------~~l~~~~~~~i~~qi~~aL~~LH~~g-----ivHrDLkp~NIlid~~g~vkL~DFg  913 (1082)
                      +|++|||+.||+|.+++.      ..+++..++.++.||+.||.|||+++     |+||||||+|||++.++.+||+|||
T Consensus        80 ~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG  159 (269)
T d2java1          80 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  159 (269)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHH
T ss_pred             EEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCCCCEEEEECC
T ss_conf             99999568999389999851545789999999999999999999999716778878858676542574788857980010


Q ss_pred             CCCCCCCC--CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCC
Q ss_conf             87447999--7303752268889023437998984421112377865436999999999997999999850899-99999
Q 001412          914 FGKGLSGN--RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQL-SLPQN  990 (1082)
Q Consensus       914 ~a~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~-~~p~~  990 (1082)
                      +|+.+...  .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+  .+..++...+..+.. .+|..
T Consensus       160 ~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~--~~~~~~~~~i~~~~~~~~~~~  237 (269)
T d2java1         160 LARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA--FSQKELAGKIREGKFRRIPYR  237 (269)
T ss_dssp             HHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHTCCCCCCTT
T ss_pred             CEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCC
T ss_conf             003224577755667788232799998399999389887527899998018899899--899999999971899889743


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCC
Q ss_conf             99889999998313692333999993577619997
Q 001412          991 LSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025 (1082)
Q Consensus       991 ~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f 1025 (1082)
                      +++++.+||.+||..||.+||++.   ++++|||+
T Consensus       238 ~s~~l~~li~~~L~~dp~~Rps~~---ell~hp~i  269 (269)
T d2java1         238 YSDELNEIITRMLNLKDYHRPSVE---EILENPLI  269 (269)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHH---HHHTSTTC
T ss_pred             CCHHHHHHHHHHCCCCHHHCCCHH---HHHHCCCC
T ss_conf             599999999997679955791899---99729819


No 17 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=386.31  Aligned_cols=286  Identities=29%  Similarity=0.548  Sum_probs=246.1

Q ss_pred             CCCCCCCEEEEEEECCCCCEEEEEEEE---CCCCCEEEEEEEECHHHH-CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE
Q ss_conf             655767808998846789489999999---499939999994020110-2024999999983331189866214202898
Q 001412          764 AKVSLTDMEWRKCLYSTDCSEIGLVLL---RDSENFLSLKRFSKQKVK-CLGKEVQVLKEKNLMKSVSPSACVPQILCTC  839 (1082)
Q Consensus       764 ~~~~~~~y~i~~~LG~G~~g~V~~~~~---~~~~~~~aiK~~~k~~~~-~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~  839 (1082)
                      .++.+++|++++.||+|+||.||+|.+   +.+++.||+|++.+.... .......+.+|+.+|++++|+|+|+++++.+
T Consensus        19 ~~~~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~   98 (322)
T d1vzoa_          19 EKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF   98 (322)
T ss_dssp             CCCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE
T ss_pred             CCCCHHCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf             53451025999898328783999999876588794899999836772101689999999999998646798399962000


Q ss_pred             EECCEEEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCC
Q ss_conf             41891899991258889778742--9999999999999999999999987978455699959975799599995278744
Q 001412          840 ADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG  917 (1082)
Q Consensus       840 ~~~~~~~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~  917 (1082)
                      .+...++++|||+.+++|..++.  +.+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus        99 ~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~  178 (322)
T d1vzoa_          99 QTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE  178 (322)
T ss_dssp             EETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred             CCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCCEEEEECCCHHH
T ss_conf             24873001231234117999987304543788888899999999885149989654773201246999888741320222


Q ss_pred             CCC---CCCEEEEECCCCCCHHHHCCC--CCCCCCCCCCHHHHHHHHCCCCCCCCCCC--CCHHHHHHHHHHCCCCCCCC
Q ss_conf             799---973037522688890234379--98984421112377865436999999999--99799999985089999999
Q 001412          918 LSG---NRTFTICGMADYLAPEIVQGK--GHGLAADWWALGVLIYFMLQGEMPFGSWR--ESEIDIVAKIAKGQLSLPQN  990 (1082)
Q Consensus       918 ~~~---~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~elltg~~pf~~~~--~~~~~~~~~i~~~~~~~p~~  990 (1082)
                      +..   ....+..|++.|++||.+.+.  .++.++|||||||++|+|++|+.||....  .....+.+......+.+|..
T Consensus       179 ~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~  258 (322)
T d1vzoa_         179 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE  258 (322)
T ss_dssp             CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTT
T ss_pred             HCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             03444432212223333310687605776887132517777999999768999888877779999998335689988654


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCC--CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             998899999983136923339999--9357761999778993110137999990000101114
Q 001412          991 LSPEAVDLLTKLLVVDENTRLGSQ--GPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSRISQH 1051 (1082)
Q Consensus       991 ~s~~~~~li~~lL~~dp~~R~s~~--~~~eil~hp~f~~~~~~~~~~~~~~~p~~~~~~~~~~ 1051 (1082)
                      +++++.+||.+||..||.+|+++.  .+.|+++||||++++|+.+..+++++|..  +.++..
T Consensus       259 ~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~~~l~~~~~~~p~~--p~~~~~  319 (322)
T d1vzoa_         259 MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFK--PVIRDE  319 (322)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCC--CCCCC-
T ss_pred             CCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCHHHCCCCHHHHHHCCCCCCCC--CCCCCC
T ss_conf             7999999999974458988199974509999749723489988997378985989--999997


No 18 
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=390.14  Aligned_cols=250  Identities=18%  Similarity=0.264  Sum_probs=219.6

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEE
Q ss_conf             78089988467894899999994999399999940201102024999999983331189866214202898418918999
Q 001412          769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL  848 (1082)
Q Consensus       769 ~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~lv  848 (1082)
                      +.|++++.||+|+||.||+++++.++..+|+|++.+..   ....+.+.+|+.+|+.++| |+|+++++++.+.+.+|+|
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~E~~il~~l~H-pnIv~l~~~~~~~~~~~lv   87 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDH-PNIVKLLDAFYYENNLWIL   87 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS---SGGGGGTHHHHHHHHHCCC-TTBCCEEEEEEETTEEEEE
T ss_pred             CCEEEEEEEEECCCCEEEEEEECCCCEEEEEEEECCCC---HHHHHHHHHHHHHHHHCCC-CCCCEEEEEEEECCEEEEE
T ss_conf             37598479930778199999999999399999987289---9999999999999986799-9988498898009958999


Q ss_pred             EECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC--CC
Q ss_conf             91258889778742---99999999999999999999999879784556999599757995999952787447999--73
Q 001412          849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--RT  923 (1082)
Q Consensus       849 ~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~--~~  923 (1082)
                      |||+.||+|..++.   +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.....  ..
T Consensus        88 mEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~  167 (288)
T d2jfla1          88 IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR  167 (288)
T ss_dssp             EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHH
T ss_pred             EECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHEEECCCCCEEEEECHHHHCCCCCCCCC
T ss_conf             96279981889998628999999999999999999999998898871407003148789998997161230357786410


Q ss_pred             EEEEECCCCCCHHHHC-----CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC---CCCCCCCHHH
Q ss_conf             0375226888902343-----7998984421112377865436999999999997999999850899---9999999889
Q 001412          924 FTICGMADYLAPEIVQ-----GKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQL---SLPQNLSPEA  995 (1082)
Q Consensus       924 ~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~---~~p~~~s~~~  995 (1082)
                      .+.+||+.|+|||++.     +..|+.++|||||||++|+|++|+.||.+  .+..+.+..+.....   ..|..+++++
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~--~~~~~~~~~i~~~~~~~~~~~~~~s~~~  245 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE--LNPMRVLLKIAKSEPPTLAQPSRWSSNF  245 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTT--SCGGGHHHHHHHSCCCCCSSGGGSCHHH
T ss_pred             CCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf             01025626479999832025788888066578789999998208899999--8999999999707998777656699999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf             99999831369233399999357761999778
Q 001412          996 VDLLTKLLVVDENTRLGSQGPTSVKTHPWFRD 1027 (1082)
Q Consensus       996 ~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~ 1027 (1082)
                      .+||.+||+.||.+||++.   ++++||||+.
T Consensus       246 ~~li~~~L~~dp~~R~t~~---ell~hp~~~~  274 (288)
T d2jfla1         246 KDFLKKCLEKNVDARWTTS---QLLQHPFVTV  274 (288)
T ss_dssp             HHHHHHHSCSSTTTSCCHH---HHTTSGGGCC
T ss_pred             HHHHHHHCCCCHHHCCCHH---HHHCCCCCCC
T ss_conf             9999997669966891999---9962923188


No 19 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=0  Score=386.12  Aligned_cols=250  Identities=15%  Similarity=0.173  Sum_probs=220.9

Q ss_pred             CEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEE
Q ss_conf             80899884678948999999949993999999402011020249999999833311898662142028984189189999
Q 001412          770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL  849 (1082)
Q Consensus       770 ~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~lv~  849 (1082)
                      .|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+|+.++| |+|+++++++.+....|++|
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~H-pnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH-PNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCC-TTBCCEEEEEEETTEEEEEE
T ss_pred             HCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCC-CCEEEEEEEEEECCEEEEEE
T ss_conf             56762797018880999999989993999999844443588999999999999997789-99823899999899889999


Q ss_pred             ECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCEEEE
Q ss_conf             1258889778742--99999999999999999999999879784556999599757995999952787447999730375
Q 001412          850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRTFTIC  927 (1082)
Q Consensus       850 E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~~~~~~~  927 (1082)
                      |||.+++|..++.  +++++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+....  ....+
T Consensus        95 E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~--~~~~~  172 (309)
T d1u5ra_          95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--ANSFV  172 (309)
T ss_dssp             ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS--BCCCC
T ss_pred             EECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEECCCCCEEEEECCCCCCCCC--CCCCC
T ss_conf             8069994578997379999999999999999999999868976667884217987999789844365334677--87313


Q ss_pred             ECCCCCCHHHHCC---CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC-C-CCCCCCHHHHHHHHHH
Q ss_conf             2268889023437---998984421112377865436999999999997999999850899-9-9999998899999983
Q 001412          928 GMADYLAPEIVQG---KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQL-S-LPQNLSPEAVDLLTKL 1002 (1082)
Q Consensus       928 gt~~y~aPE~~~~---~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~-~-~p~~~s~~~~~li~~l 1002 (1082)
                      ||+.|+|||++.+   ..|+.++|||||||++|+|++|..||.+  .+....+..+..... . .+..+++++.+||.+|
T Consensus       173 GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~--~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~  250 (309)
T d1u5ra_         173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN--MNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC  250 (309)
T ss_dssp             SCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTT--SCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             47663688998346788867214545589999999878899999--7999999999828999888788899999999997


Q ss_pred             CCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf             1369233399999357761999778
Q 001412         1003 LVVDENTRLGSQGPTSVKTHPWFRD 1027 (1082)
Q Consensus      1003 L~~dp~~R~s~~~~~eil~hp~f~~ 1027 (1082)
                      |+.||.+||++.   ++++||||..
T Consensus       251 L~~dP~~Rpt~~---ell~Hp~~~~  272 (309)
T d1u5ra_         251 LQKIPQDRPTSE---VLLKHRFVLR  272 (309)
T ss_dssp             TCSSGGGSCCHH---HHTTCHHHHS
T ss_pred             CCCCHHHCCCHH---HHHHCHHHCC
T ss_conf             737965791899---9971997537


No 20 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=0  Score=380.56  Aligned_cols=256  Identities=23%  Similarity=0.389  Sum_probs=228.1

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCC------CHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
Q ss_conf             6780899884678948999999949993999999402011020------2499999998333118986621420289841
Q 001412          768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCL------GKEVQVLKEKNLMKSVSPSACVPQILCTCAD  841 (1082)
Q Consensus       768 ~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~------~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~  841 (1082)
                      .++|++++.||+|+||+||+|+++.+++.||+|++.+......      .....+++|+.+++++..|++|++++++|.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             CCCCEECEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf             66388852884176849999999999989999999624464114788899999999999999985079974799762146


Q ss_pred             CCEEEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCC
Q ss_conf             891899991258889778742--999999999999999999999998797845569995997579959999527874479
Q 001412          842 SMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS  919 (1082)
Q Consensus       842 ~~~~~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~  919 (1082)
                      +++.|++|||++|++|.++++  +++++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+.
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~  161 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD  161 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCHHEEECC
T ss_conf             76059999768986689999865999999999999999999999987599432346254898689983871240316726


Q ss_pred             CC-CCEEEEECCCCCCHHHHCC------CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC----
Q ss_conf             99-7303752268889023437------998984421112377865436999999999997999999850899999----
Q 001412          920 GN-RTFTICGMADYLAPEIVQG------KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLP----  988 (1082)
Q Consensus       920 ~~-~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p----  988 (1082)
                      .. .....+||+.|+|||.+.+      ..++.++||||+||++|+|++|+.||.+  .+.....+.+..+...++    
T Consensus       162 ~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~--~~~~~~~~~i~~~~~~~~~~~~  239 (277)
T d1phka_         162 PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH--RKQMLMLRMIMSGNYQFGSPEW  239 (277)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCCCTTTG
T ss_pred             CCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCHHEECCCCHHHHHHCCCCCCCCC--CCHHHHHHHHHHCCCCCCCCCC
T ss_conf             88721345246788898886053445678899233185656023103228889889--9999999999818988898543


Q ss_pred             CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf             9999889999998313692333999993577619997789
Q 001412          989 QNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028 (1082)
Q Consensus       989 ~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~ 1028 (1082)
                      .++|+++++||.+||+.||.+||++.   ++++||||+.+
T Consensus       240 ~~~s~~~~~li~~~L~~~p~~R~s~~---eil~h~~~~~~  276 (277)
T d1phka_         240 DDYSDTVKDLVSRFLVVQPQKRYTAE---EALAHPFFQQY  276 (277)
T ss_dssp             GGSCHHHHHHHHHHCCSSGGGSCCHH---HHTTSGGGCTT
T ss_pred             CCCCHHHHHHHHHHCCCCHHHCCCHH---HHHCCHHHHHH
T ss_conf             46899999999997658966891999---99739787975


No 21 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=382.14  Aligned_cols=250  Identities=19%  Similarity=0.317  Sum_probs=226.5

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEE
Q ss_conf             67808998846789489999999499939999994020110202499999998333118986621420289841891899
Q 001412          768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL  847 (1082)
Q Consensus       768 ~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~l  847 (1082)
                      +++|++++.||+|+||.||+|.++.+++.||+|++.+..    .....+.+|+.+|+.++| ++|++++++|.+..++|+
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~----~~~~~~~~Ei~il~~l~H-pnIv~~~~~~~~~~~~~l   78 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIARH-RNILHLHESFESMEELVM   78 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSCC-TTBCCEEEEEEETTEEEE
T ss_pred             CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC----CCHHHHHHHHHHHHHCCC-CCCCEEEEEEEECCEEEE
T ss_conf             010588789831778399999998999699999975786----659999999999985799-798909899988998899


Q ss_pred             EEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC--CCCEEEEECCCCCCCCC-C
Q ss_conf             991258889778742---99999999999999999999999879784556999599757--99599995278744799-9
Q 001412          848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK--SGHLQLVDFRFGKGLSG-N  921 (1082)
Q Consensus       848 v~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~--~g~vkL~DFg~a~~~~~-~  921 (1082)
                      |||||.|++|.+++.   ..+++.+++.++.||+.||.|||++||+||||||+|||++.  .+.+||+|||+++.... .
T Consensus        79 vmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~  158 (321)
T d1tkia_          79 IFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD  158 (321)
T ss_dssp             EECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred             EEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCHHHCCCCCC
T ss_conf             99538998088998753899999999999999999999998769975135544434437885189976441110034677


Q ss_pred             CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC----CCCHHHHH
Q ss_conf             73037522688890234379989844211123778654369999999999979999998508999999----99988999
Q 001412          922 RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQ----NLSPEAVD  997 (1082)
Q Consensus       922 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~  997 (1082)
                      ...+.+||+.|+|||...+..++.++|||||||++|+|++|..||.+  .+..+.+..|......++.    .+++++++
T Consensus       159 ~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~--~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  236 (321)
T d1tkia_         159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA--ETNQQIIENIMNAEYTFDEEAFKEISIEAMD  236 (321)
T ss_dssp             EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHHHHTCCCCCHHHHTTSCHHHHH
T ss_pred             CCCCCCCCCCCCCCHHCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCC--CCHHHHHHHHHHCCCCCCHHHCCCCCHHHHH
T ss_conf             53212233222340210487778401130279999999828999999--8999999999838999880223678999999


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf             999831369233399999357761999778
Q 001412          998 LLTKLLVVDENTRLGSQGPTSVKTHPWFRD 1027 (1082)
Q Consensus       998 li~~lL~~dp~~R~s~~~~~eil~hp~f~~ 1027 (1082)
                      ||.+||..||.+||++.   ++++||||..
T Consensus       237 li~~~L~~dp~~R~s~~---eil~hp~~~~  263 (321)
T d1tkia_         237 FVDRLLVKERKSRMTAS---EALQHPWLKQ  263 (321)
T ss_dssp             HHHTTSCSSGGGSCCHH---HHHHSHHHHS
T ss_pred             HHHHHCCCCHHHCCCHH---HHHCCHHHCC
T ss_conf             99998669966890999---9963996566


No 22 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=377.97  Aligned_cols=249  Identities=14%  Similarity=0.249  Sum_probs=217.2

Q ss_pred             EEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE----CCEEE
Q ss_conf             08998846789489999999499939999994020110202499999998333118986621420289841----89189
Q 001412          771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD----SMHAG  846 (1082)
Q Consensus       771 y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~----~~~~~  846 (1082)
                      |++.+.||+|+||.||++.++.++..+|+|++.+.... ......+.+|+.+|++++| |+|++++++|.+    ...+|
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~-~~~~~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~~~~~~~   88 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQH-PNIVRFYDSWESTVKGKKCIV   88 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCC-TTBCCEEEEEEEESSSCEEEE
T ss_pred             EEEEEEEECCCCCEEEEEEECCCCEEEEEEEECHHHCC-HHHHHHHHHHHHHHHHCCC-CCEEEEEEEEEECCCCCCEEE
T ss_conf             88516970082849999999999959999998512279-8999999999999985799-985069999840334588899


Q ss_pred             EEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCC--CEECCCCCCCEEEC-CCCCEEEEECCCCCCCCCC
Q ss_conf             9991258889778742--99999999999999999999999879--78455699959975-7995999952787447999
Q 001412          847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRG--VLYRGVSPDVLMLD-KSGHLQLVDFRFGKGLSGN  921 (1082)
Q Consensus       847 lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDLkp~NIlid-~~g~vkL~DFg~a~~~~~~  921 (1082)
                      ++|||+.|++|.+++.  ..+++..++.++.||+.||.|||+++  |+||||||+|||++ .++.+||+|||+|+.....
T Consensus        89 ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~  168 (270)
T d1t4ha_          89 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS  168 (270)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred             EEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCEEECCCCCEEEEECCCCEECCCC
T ss_conf             99957898948999751355469999999999999999999789979968767435116679998898005765423687


Q ss_pred             CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC--CCCCCCCHHHHHHH
Q ss_conf             7303752268889023437998984421112377865436999999999997999999850899--99999998899999
Q 001412          922 RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQL--SLPQNLSPEAVDLL  999 (1082)
Q Consensus       922 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li  999 (1082)
                      ...+.+||+.|+|||++.+ .++.++|||||||++|+|++|+.||... .+...+++.+..+..  .++...++++.+||
T Consensus       169 ~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li  246 (270)
T d1t4ha_         169 FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC-QNAAQIYRRVTSGVKPASFDKVAIPEVKEII  246 (270)
T ss_dssp             SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC-SSHHHHHHHHTTTCCCGGGGGCCCHHHHHHH
T ss_pred             CCCCCCCCCCCCCHHHHCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf             6677553813008988478-9998671100799999998788999876-5599999999738998656755789999999


Q ss_pred             HHHCCCCCCCCCCCCCHHHHHCCCCCC
Q ss_conf             983136923339999935776199977
Q 001412         1000 TKLLVVDENTRLGSQGPTSVKTHPWFR 1026 (1082)
Q Consensus      1000 ~~lL~~dp~~R~s~~~~~eil~hp~f~ 1026 (1082)
                      .+||..||++||++.   |+++||||+
T Consensus       247 ~~~l~~dp~~R~s~~---ell~Hp~fk  270 (270)
T d1t4ha_         247 EGCIRQNKDERYSIK---DLLNHAFFQ  270 (270)
T ss_dssp             HHHSCSSGGGSCCHH---HHHTSGGGC
T ss_pred             HHHCCCCHHHCCCHH---HHHCCCCCC
T ss_conf             997637975892999---996775409


No 23 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=375.25  Aligned_cols=250  Identities=26%  Similarity=0.355  Sum_probs=219.9

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCC---HHHHHHHHHHHHCCCCC-CCCCCCEEEEEEECCE
Q ss_conf             7808998846789489999999499939999994020110202---49999999833311898-6621420289841891
Q 001412          769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLG---KEVQVLKEKNLMKSVSP-SACVPQILCTCADSMH  844 (1082)
Q Consensus       769 ~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~---~~~~~~~E~~il~~l~~-~~~I~~l~~~~~~~~~  844 (1082)
                      ++|++.+.||+|+||.||+|.+..+++.+|+|++.+.......   ...++.+|+.+|+++++ |++|++++++|.+.+.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCE
T ss_conf             83799679840878399999999999799999985688443345567999999999999743589881279999830996


Q ss_pred             EEEEEECCCC-CCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC-CCCEEEEECCCCCCCCC
Q ss_conf             8999912588-89778742--99999999999999999999999879784556999599757-99599995278744799
Q 001412          845 AGLLLNTYLA-CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-SGHLQLVDFRFGKGLSG  920 (1082)
Q Consensus       845 ~~lv~E~~~g-~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~-~g~vkL~DFg~a~~~~~  920 (1082)
                      .|++|||+.+ +++..++.  ..+++..++.++.||+.||.|||++||+||||||+|||++. .+.+||+|||+|+....
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~  163 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD  163 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCS
T ss_pred             EEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEECCCCCCEECCC
T ss_conf             89999833686228999861589999999999999999999998779755667611147744788489775465353244


Q ss_pred             CCCEEEEECCCCCCHHHHCCCCC-CCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf             97303752268889023437998-98442111237786543699999999999799999985089999999998899999
Q 001412          921 NRTFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLL  999 (1082)
Q Consensus       921 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li  999 (1082)
                      ....+.+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||..  .      ..+......++..+|+++++||
T Consensus       164 ~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~--~------~~i~~~~~~~~~~~s~~~~~li  235 (273)
T d1xwsa_         164 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--D------EEIIRGQVFFRQRVSSECQHLI  235 (273)
T ss_dssp             SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS--H------HHHHHCCCCCSSCCCHHHHHHH
T ss_pred             CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCC--C------HHHHHCCCCCCCCCCHHHHHHH
T ss_conf             4556656587747999984899788653325540345367568899887--3------6776154477877999999999


Q ss_pred             HHHCCCCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf             983136923339999935776199977899
Q 001412         1000 TKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029 (1082)
Q Consensus      1000 ~~lL~~dp~~R~s~~~~~eil~hp~f~~~~ 1029 (1082)
                      .+||..||++|||+.   ++++||||+++.
T Consensus       236 ~~~L~~dp~~R~s~~---eil~hp~~~~~~  262 (273)
T d1xwsa_         236 RWCLALRPSDRPTFE---EIQNHPWMQDVL  262 (273)
T ss_dssp             HHHTCSSGGGSCCHH---HHHTSGGGSSCC
T ss_pred             HHHCCCCHHHCCCHH---HHHCCHHHCCCC
T ss_conf             997608975893999---985398667887


No 24 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=377.70  Aligned_cols=252  Identities=23%  Similarity=0.332  Sum_probs=213.7

Q ss_pred             CCCCCEEEEE-EECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE---
Q ss_conf             5767808998-846789489999999499939999994020110202499999998333118986621420289841---
Q 001412          766 VSLTDMEWRK-CLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD---  841 (1082)
Q Consensus       766 ~~~~~y~i~~-~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~---  841 (1082)
                      .-+++|++++ .||+|+||.||+|.+..+++.||+|++.+.        ..+.+|+.++.++.+|++|++++++|.+   
T Consensus         8 ~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~   79 (335)
T d2ozaa1           8 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYA   79 (335)
T ss_dssp             CGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred             CCCCCEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECCC--------HHHHHHHHHHHHHCCCCCCCEEEEEEEECCC
T ss_conf             70148798107965454869999998899989999998974--------7799999999986699997829899950346


Q ss_pred             -CCEEEEEEECCCCCCHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC---CCCEEEEECC
Q ss_conf             -891899991258889778742----99999999999999999999999879784556999599757---9959999527
Q 001412          842 -SMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQLVDFR  913 (1082)
Q Consensus       842 -~~~~~lv~E~~~g~~L~~~l~----~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~---~g~vkL~DFg  913 (1082)
                       ..++|++||||.||+|.+++.    ..|++..++.++.||+.||.|||++||+||||||+|||++.   .+.+||+|||
T Consensus        80 ~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG  159 (335)
T d2ozaa1          80 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG  159 (335)
T ss_dssp             TEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             CCCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             89789999977899849999986278775799999999999999999997698644410022011355556631135455


Q ss_pred             CCCCCCC-CCCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCH--HHHHHHHHHCCCCCCC-
Q ss_conf             8744799-97303752268889023437998984421112377865436999999999997--9999998508999999-
Q 001412          914 FGKGLSG-NRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESE--IDIVAKIAKGQLSLPQ-  989 (1082)
Q Consensus       914 ~a~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--~~~~~~i~~~~~~~p~-  989 (1082)
                      +++.... ....+.+||+.|+|||++.+..|+.++|||||||++|+|+||+.||.+.....  ......+......+|. 
T Consensus       160 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~  239 (335)
T d2ozaa1         160 FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP  239 (335)
T ss_dssp             TCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTT
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             12333688864322677563792777489888888887645167788658899889887788999999985388888985


Q ss_pred             ---CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf             ---999889999998313692333999993577619997789
Q 001412          990 ---NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028 (1082)
Q Consensus       990 ---~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~ 1028 (1082)
                         .+++++.+||.+||+.||++||++.   ++++||||...
T Consensus       240 ~~~~~s~~~~~li~~~L~~dP~~R~s~~---eil~hp~~~~~  278 (335)
T d2ozaa1         240 EWSEVSEEVKMLIRNLLKTEPTQRMTIT---EFMNHPWIMQS  278 (335)
T ss_dssp             HHHHSCHHHHHHHHHHSCSSTTTSCCHH---HHHHSHHHHTT
T ss_pred             CCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHCCHHHHCC
T ss_conf             4346999999999997569965790999---99709876178


No 25 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=366.72  Aligned_cols=254  Identities=20%  Similarity=0.267  Sum_probs=214.1

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEE
Q ss_conf             67808998846789489999999499939999994020110202499999998333118986621420289841891899
Q 001412          768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL  847 (1082)
Q Consensus       768 ~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~l  847 (1082)
                      +++|++++.||+|+||.||+|++..+++.||+|++.+... .......+.+|+.+|++++| |+|++++++|.+..++|+
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~H-p~Iv~~~~~~~~~~~~~i   78 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNH-PNIVKLLDVIHTENKLYL   78 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTCCC-TTBCCEEEEEEETTEEEE
T ss_pred             CCCCEECCEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC-CHHHHHHHHHHHHHHHHCCC-CCEEEECCCCCCCCCEEE
T ss_conf             9997765177237680999999999997999999802225-75899999999999986799-838874453322432037


Q ss_pred             EEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC--C
Q ss_conf             991258889778742---99999999999999999999999879784556999599757995999952787447999--7
Q 001412          848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--R  922 (1082)
Q Consensus       848 v~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~--~  922 (1082)
                      +|||+.++.+.....   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.....  .
T Consensus        79 v~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~  158 (298)
T d1gz8a_          79 VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT  158 (298)
T ss_dssp             EEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred             EEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHEEECCCCCCEECCCCCCEECCCCCCC
T ss_conf             88623774455544202568888999999999999999865288992135711401134676210357861343688641


Q ss_pred             CEEEEECCCCCCHHHHCCCC-CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC--C---------------
Q ss_conf             30375226888902343799-89844211123778654369999999999979999998508--9---------------
Q 001412          923 TFTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG--Q---------------  984 (1082)
Q Consensus       923 ~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~--~---------------  984 (1082)
                      ....+||+.|+|||++.... ++.++|+||+|+++|+|++|+.||.+  .+..+....+...  .               
T Consensus       159 ~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  236 (298)
T d1gz8a_         159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG--DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY  236 (298)
T ss_dssp             TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred             CEEECCCCEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC--CCHHHHHHHHHHHCCCCCHHHCCCCCCCCCC
T ss_conf             00103652154112213665777422103333134279668799898--8999999999983289833314442224212


Q ss_pred             -CCC-----------CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf             -999-----------99999889999998313692333999993577619997789
Q 001412          985 -LSL-----------PQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028 (1082)
Q Consensus       985 -~~~-----------p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~ 1028 (1082)
                       ..+           ...++.++.+||.+||+.||++|||+.   |+++||||+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~---ell~H~ff~~~  289 (298)
T d1gz8a_         237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK---AALAHPFFQDV  289 (298)
T ss_dssp             CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHH---HHHTSGGGTTC
T ss_pred             CCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHCCHHHCCC
T ss_conf             434543222204441667899999999997639955791899---99678701469


No 26 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=369.79  Aligned_cols=251  Identities=19%  Similarity=0.263  Sum_probs=213.5

Q ss_pred             EEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCC--CHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEE
Q ss_conf             899884678948999999949993999999402011020--249999999833311898662142028984189189999
Q 001412          772 EWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCL--GKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL  849 (1082)
Q Consensus       772 ~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~--~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~lv~  849 (1082)
                      +.++.||+|+||+||+|.++.+++.||+|++.+......  .....+++|+.+|+.++| ++|++++++|.++.++|+||
T Consensus         1 E~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~h-pnIv~~~~~~~~~~~~~ivm   79 (299)
T d1ua2a_           1 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH-PNIIGLLDAFGHKSNISLVF   79 (299)
T ss_dssp             CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCC-TTBCCEEEEECCTTCCEEEE
T ss_pred             CCCEEECCCCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCEEEEEEEECCCCCEEEHH
T ss_conf             95638512728299999999999699999984202124567999999999999986799-99868985422587402204


Q ss_pred             ECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC--CCEE
Q ss_conf             1258889778742--99999999999999999999999879784556999599757995999952787447999--7303
Q 001412          850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--RTFT  925 (1082)
Q Consensus       850 E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~--~~~~  925 (1082)
                      ||+.++++..+..  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....  ...+
T Consensus        80 E~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~  159 (299)
T d1ua2a_          80 DFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTH  159 (299)
T ss_dssp             ECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCC
T ss_pred             HHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             55345077655412667789999999999999998863163550357762588537784114657610005787554330


Q ss_pred             EEECCCCCCHHHHCCC-CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC--CC---C-------------
Q ss_conf             7522688890234379-989844211123778654369999999999979999998508--99---9-------------
Q 001412          926 ICGMADYLAPEIVQGK-GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG--QL---S-------------  986 (1082)
Q Consensus       926 ~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~--~~---~-------------  986 (1082)
                      .+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+  .+..+.+..|.+.  .+   .             
T Consensus       160 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~--~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~  237 (299)
T d1ua2a_         160 QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG--DSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF  237 (299)
T ss_dssp             SCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC
T ss_pred             EECCHHHCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCC--CCHHHHHHHHHHHCCCCCHHHCCCHHCCCHHHHH
T ss_conf             20473336399972677888056436304289999859699999--9999999999985189972545210002134430


Q ss_pred             --C--------CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf             --9--------99999889999998313692333999993577619997789
Q 001412          987 --L--------PQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028 (1082)
Q Consensus       987 --~--------p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~ 1028 (1082)
                        +        ...+++++.+||.+||+.||++|||+.   |+|+||||++.
T Consensus       238 ~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~---e~L~Hp~f~~~  286 (299)
T d1ua2a_         238 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITAT---QALKMKYFSNR  286 (299)
T ss_dssp             CCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHH---HHHTSGGGTSS
T ss_pred             CCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHCCHHHCCC
T ss_conf             34789886785656899999999997638945690899---99679965789


No 27 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=367.98  Aligned_cols=257  Identities=18%  Similarity=0.268  Sum_probs=212.9

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCC-CCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCC--CCCCCCCEEEEEEE---
Q ss_conf             67808998846789489999999499-9399999940201102024999999983331189--86621420289841---
Q 001412          768 LTDMEWRKCLYSTDCSEIGLVLLRDS-ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTCAD---  841 (1082)
Q Consensus       768 ~~~y~i~~~LG~G~~g~V~~~~~~~~-~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~--~~~~I~~l~~~~~~---  841 (1082)
                      .++|++++.||+|+||.||+|++..+ ++.+|+|++.+..... .....+.+|+.+|+.|.  +||+|++++++|..   
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~   84 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   84 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             CCCEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEHHHCCC-HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
T ss_conf             5897988899215586999999988899899999980232451-679999999999998742589880236632214666


Q ss_pred             --CCEEEEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCC
Q ss_conf             --891899991258889778742---999999999999999999999998797845569995997579959999527874
Q 001412          842 --SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK  916 (1082)
Q Consensus       842 --~~~~~lv~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~  916 (1082)
                        ..+.+++||++.++.+.....   ..+++..++.++.|++.||.|||+++|+||||||+|||++..+.+||+|||+++
T Consensus        85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~  164 (305)
T d1blxa_          85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR  164 (305)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             CCCCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCCCEEECCHHHHH
T ss_conf             66746999997405871444443037899989999999999999999975889835798627898589975421000101


Q ss_pred             CCCC-CCCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC--C---------
Q ss_conf             4799-973037522688890234379989844211123778654369999999999979999998508--9---------
Q 001412          917 GLSG-NRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG--Q---------  984 (1082)
Q Consensus       917 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~--~---------  984 (1082)
                      .... ....+.+||+.|+|||++.+..|+.++||||+||++|+|++|+.||.+  .+..+.+..+...  .         
T Consensus       165 ~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~--~~~~~~~~~i~~~~~~~~~~~~~~~  242 (305)
T d1blxa_         165 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG--SSDVDQLGKILDVIGLPGEEDWPRD  242 (305)
T ss_dssp             CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHHHCCCCGGGSCTT
T ss_pred             HHCCCCCCCCCCCCHHHCCCCHHCCCCCCHHEHHHCHHHHHHHHHHCCCCCCC--CCHHHHHHHHHHHHCCCCHHCCCCC
T ss_conf             10023457776548511483100179888111000328999999878799899--8989999999984079961105321


Q ss_pred             ----------------CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCC
Q ss_conf             ----------------9999999988999999831369233399999357761999778993
Q 001412          985 ----------------LSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDW 1030 (1082)
Q Consensus       985 ----------------~~~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~~~ 1030 (1082)
                                      ..++..+++.+.+||.+||+.||++|||+.   |+|+||||+++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~---e~L~Hpff~~i~~  301 (305)
T d1blxa_         243 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY---SALSHPYFQDLER  301 (305)
T ss_dssp             CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHH---HHHTSGGGTTCCC
T ss_pred             CCCHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHCCHHHCCCHH
T ss_conf             1110333022345645440445899999999998748966791899---9966963407521


No 28 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=0  Score=360.91  Aligned_cols=254  Identities=21%  Similarity=0.313  Sum_probs=213.5

Q ss_pred             CCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE--CCE
Q ss_conf             767808998846789489999999499939999994020110202499999998333118986621420289841--891
Q 001412          767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMH  844 (1082)
Q Consensus       767 ~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~--~~~  844 (1082)
                      ..++|++++.||+|+||+||+|+++.+++.||+|++.+.      ...++.+|+.+|+.+.+|++|++++++|..  ...
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~  106 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT  106 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCS
T ss_pred             CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHH------HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCC
T ss_conf             986718978983174819999998899979999998889------99999999999985157998767999998168771


Q ss_pred             EEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC-CEEEEECCCCCCCCC-CC
Q ss_conf             8999912588897787429999999999999999999999987978455699959975799-599995278744799-97
Q 001412          845 AGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG-HLQLVDFRFGKGLSG-NR  922 (1082)
Q Consensus       845 ~~lv~E~~~g~~L~~~l~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g-~vkL~DFg~a~~~~~-~~  922 (1082)
                      ++++|||+.+++|..+. +.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+|+.... ..
T Consensus       107 ~~~v~e~~~~~~L~~~~-~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~  185 (328)
T d3bqca1         107 PALVFEHVNNTDFKQLY-QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE  185 (328)
T ss_dssp             EEEEEECCCSCBGGGTT-TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCC
T ss_pred             EEEEEEECCCCCHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCEECCCCCC
T ss_conf             26888631798589974-68999999999999999998876433443456441237748998366415654266468874


Q ss_pred             CEEEEECCCCCCHHHHCCC-CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH-------------CCC---
Q ss_conf             3037522688890234379-98984421112377865436999999999997999999850-------------899---
Q 001412          923 TFTICGMADYLAPEIVQGK-GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK-------------GQL---  985 (1082)
Q Consensus       923 ~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~-------------~~~---  985 (1082)
                      ....++|+.|+|||.+.+. .++.++|+||+||++|+|++|..||.... +.......+..             ...   
T Consensus       186 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~-~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~  264 (328)
T d3bqca1         186 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH-DNYDQLVRIAKVLGTEDLYDYIDKYNIELD  264 (328)
T ss_dssp             CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCS-SHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC-HHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
T ss_conf             4432248642476102688888845232335455587604889998876-018999999998788415555542254447


Q ss_pred             ---------------------CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
Q ss_conf             ---------------------9999999889999998313692333999993577619997789931
Q 001412          986 ---------------------SLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWK 1031 (1082)
Q Consensus       986 ---------------------~~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~~~~ 1031 (1082)
                                           .....+++++.+||++||+.||.+|||++   |+|+||||+++.|+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~---e~L~Hp~F~~v~~~  328 (328)
T d3bqca1         265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR---EAMEHPYFYTVVKD  328 (328)
T ss_dssp             GGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHH---HHHTSGGGTTSCCC
T ss_pred             CCCCHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHCCCCCCCCCCC
T ss_conf             43000003334331121155211244899999999998669956890899---99649355887979


No 29 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=359.89  Aligned_cols=252  Identities=14%  Similarity=0.212  Sum_probs=213.2

Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEECCCCC-----EEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE
Q ss_conf             5576780899884678948999999949993-----99999940201102024999999983331189866214202898
Q 001412          765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSEN-----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC  839 (1082)
Q Consensus       765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~-----~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~  839 (1082)
                      .+..++|++.+.||+|+||.||+|.+..+++     .+|+|.+.+...  ......+.+|..+|.++.+||+|+++++++
T Consensus        33 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~  110 (325)
T d1rjba_          33 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNLLGAC  110 (325)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCCHHHEEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEEEECCCCC--HHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf             577899397019830788199999985788554204999999663358--789999999999999715899686877888


Q ss_pred             EECCEEEEEEECCCCCCHHHHHCC-------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEECCC
Q ss_conf             418918999912588897787429-------------------------9999999999999999999999879784556
Q 001412          840 ADSMHAGLLLNTYLACPLASILHT-------------------------PLDEQSARFCAASVVAALEDLHKRGVLYRGV  894 (1082)
Q Consensus       840 ~~~~~~~lv~E~~~g~~L~~~l~~-------------------------~l~~~~~~~i~~qi~~aL~~LH~~givHrDL  894 (1082)
                      .+...+|+||||+.+|+|.++++.                         .+++..++.++.||+.||.|||+++|+||||
T Consensus       111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDl  190 (325)
T d1rjba_         111 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL  190 (325)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             EECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCC
T ss_conf             62995899997279995999998625777510221000012220012577899999999999999999997399050527


Q ss_pred             CCCCEEECCCCCEEEEECCCCCCCCCCCC----EEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCC-CCCCCCCC
Q ss_conf             99959975799599995278744799973----03752268889023437998984421112377865436-99999999
Q 001412          895 SPDVLMLDKSGHLQLVDFRFGKGLSGNRT----FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSW  969 (1082)
Q Consensus       895 kp~NIlid~~g~vkL~DFg~a~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~  969 (1082)
                      ||+|||++.++.+||+|||+|+.......    .+.+||+.|+|||++.+..++.++|||||||++|||++ |..||.+.
T Consensus       191 Kp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~  270 (325)
T d1rjba_         191 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI  270 (325)
T ss_dssp             SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             CHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCC
T ss_conf             03214434598289851422220457786156234357876578388727999963303000399999983899999998


Q ss_pred             CCCHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCC
Q ss_conf             99979999998508-999999999889999998313692333999993577619
Q 001412          970 RESEIDIVAKIAKG-QLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTH 1022 (1082)
Q Consensus       970 ~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~h 1022 (1082)
                      ... ....+.+..+ .+..|..+++++.+||.+||+.||++|||+.   ++++|
T Consensus       271 ~~~-~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~---ei~~~  320 (325)
T d1rjba_         271 PVD-ANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFP---NLTSF  320 (325)
T ss_dssp             CCS-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH---HHHHH
T ss_pred             CHH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHHH
T ss_conf             989-999999856998998876789999999997588966893999---99999


No 30 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=358.38  Aligned_cols=254  Identities=20%  Similarity=0.281  Sum_probs=215.3

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC----
Q ss_conf             6780899884678948999999949993999999402011020249999999833311898662142028984189----
Q 001412          768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM----  843 (1082)
Q Consensus       768 ~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~----  843 (1082)
                      -++|++++.||+|+||.||+|.++.+++.||+|++.+... .......+.+|+.+|+.++|+ +|++++++|.+..    
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~hp-niv~l~~~~~~~~~~~~   94 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMRHE-NVIGLLDVFTPDETLDD   94 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCBT-TBCCCSEEECSCSSTTT
T ss_pred             CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHC-CHHHHHHHHHHHHHHHHCCCC-CEEEEEEEECCCCCCCC
T ss_conf             7718998898017781999999999998999999852225-969999999999999866898-75479998635765555


Q ss_pred             --EEEEEEECCCCCCHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCC
Q ss_conf             --1899991258889778742-9999999999999999999999987978455699959975799599995278744799
Q 001412          844 --HAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG  920 (1082)
Q Consensus       844 --~~~lv~E~~~g~~L~~~l~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~  920 (1082)
                        .+|++|||+ +.+|..+.+ +.|++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus        95 ~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~  173 (346)
T d1cm8a_          95 FTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS  173 (346)
T ss_dssp             CCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             CCEEEEEEECC-CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCEECCCC
T ss_conf             41599998405-52189998740226999999999999999998737876456685111121001221134310220687


Q ss_pred             CCCEEEEECCCCCCHHHHCCC-CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC---------------
Q ss_conf             973037522688890234379-9898442111237786543699999999999799999985089---------------
Q 001412          921 NRTFTICGMADYLAPEIVQGK-GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQ---------------  984 (1082)
Q Consensus       921 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~---------------  984 (1082)
                      . ....+||+.|+|||++.+. .++.++|+||+||++|+|++|+.||.+  .+.......+....               
T Consensus       174 ~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (346)
T d1cm8a_         174 E-MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG--SDHLDQLKEIMKVTGTPPAEFVQRLQSDE  250 (346)
T ss_dssp             S-CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred             C-CCCCCCCCCCCCHHHHCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCC--CCHHHHHHHHHHCCCCCCHHHHHHHCCHH
T ss_conf             6-31024553335889981787899650103003899999978699888--97689999998503788488886530003


Q ss_pred             ----------------CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCC
Q ss_conf             ----------------9999999988999999831369233399999357761999778993
Q 001412          985 ----------------LSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDW 1030 (1082)
Q Consensus       985 ----------------~~~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~~~ 1030 (1082)
                                      ......+++++.+||.+||..||.+|||+.   ++|+||||+++.+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~---eiL~Hp~f~~~~~  309 (346)
T d1cm8a_         251 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAG---EALAHPYFESLHD  309 (346)
T ss_dssp             HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHH---HHHHSGGGTTTC-
T ss_pred             HHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHCCHHHCCCCC
T ss_conf             4433115786665566775568999999999997729955792999---9963962375877


No 31 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=0  Score=356.44  Aligned_cols=252  Identities=19%  Similarity=0.272  Sum_probs=218.2

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC----
Q ss_conf             6780899884678948999999949993999999402011020249999999833311898662142028984189----
Q 001412          768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM----  843 (1082)
Q Consensus       768 ~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~----  843 (1082)
                      -++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++|+ +|+++++++.+..    
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hp-niv~~~~~~~~~~~~~~   84 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP-AIVAVYDTGEAETPAGP   84 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCT-TBCCEEEEEEEECSSSE
T ss_pred             CCEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCC-CCCCCCCEEEECCCCCC
T ss_conf             62069868996089929999999999989999998556646989999999999999856999-88731143543268876


Q ss_pred             EEEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCC-
Q ss_conf             1899991258889778742--9999999999999999999999987978455699959975799599995278744799-
Q 001412          844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG-  920 (1082)
Q Consensus       844 ~~~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~-  920 (1082)
                      ..|+||||+.|++|..++.  +.+++.+++.++.||+.||.|||++||+||||||+|||++.++..+++|||.++.... 
T Consensus        85 ~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~  164 (277)
T d1o6ya_          85 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS  164 (277)
T ss_dssp             EEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC--
T ss_pred             EEEEEEECCCCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCC
T ss_conf             69999977889871011203589999999999999999999998579527634675566575432010034443221235


Q ss_pred             ----CCCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCC----CCCCC
Q ss_conf             ----9730375226888902343799898442111237786543699999999999799999985089999----99999
Q 001412          921 ----NRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSL----PQNLS  992 (1082)
Q Consensus       921 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~----p~~~s  992 (1082)
                          ......+||+.|+|||++.+..++.++||||||+++|+|+||+.||.+  .+..+.+..+.......    .+.+|
T Consensus       165 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~--~~~~~~~~~~~~~~~~~~~~~~~~~s  242 (277)
T d1o6ya_         165 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG--DSPVSVAYQHVREDPIPPSARHEGLS  242 (277)
T ss_dssp             --------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHCCCCCGGGTSSSCC
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCHHHHHHHHHCCCCCCC--CCHHHHHHHHHHCCCCCCCHHCCCCC
T ss_conf             4433334642576243699998399999663202652899999769799899--69999999998469999710034789


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCC
Q ss_conf             889999998313692333999993577619997
Q 001412          993 PEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWF 1025 (1082)
Q Consensus       993 ~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f 1025 (1082)
                      +++.+||.+||..||.+||++.   +.+.|+|.
T Consensus       243 ~~l~~li~~~L~~dp~~R~~sa---~~l~~~l~  272 (277)
T d1o6ya_         243 ADLDAVVLKALAKNPENRYQTA---AEMRADLV  272 (277)
T ss_dssp             HHHHHHHHHHTCSSGGGSCSSH---HHHHHHHH
T ss_pred             HHHHHHHHHHCCCCHHHCHHHH---HHHHHHHH
T ss_conf             9999999998667976777399---99999999


No 32 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=0  Score=355.96  Aligned_cols=252  Identities=18%  Similarity=0.267  Sum_probs=215.5

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEE
Q ss_conf             67808998846789489999999499939999994020110202499999998333118986621420289841891899
Q 001412          768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL  847 (1082)
Q Consensus       768 ~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~l  847 (1082)
                      +++|++++.||+|+||+||+|+++ +++.||+|++.+... .......+.+|+.+|+.++| ++|++++..|.+....++
T Consensus         1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~h-pnIv~~~~~~~~~~~~~i   77 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKE-DEGIPSTTIREISILKELKH-SNIVKLYDVIHTKKRLVL   77 (286)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCCC-TTBCCEEEEEECSSCEEE
T ss_pred             CCCCEECCEEECCCCCEEEEEEEC-CCCEEEEEEEEHHHC-CHHHHHHHHHHHHHHHHCCC-CCEEEEEEECCCCCCEEE
T ss_conf             999634318722778189999968-999999999812326-85899999999999986799-868766012046773158


Q ss_pred             EEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC--CC
Q ss_conf             991258889778742--99999999999999999999999879784556999599757995999952787447999--73
Q 001412          848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--RT  923 (1082)
Q Consensus       848 v~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~--~~  923 (1082)
                      ++|++.++.+..+..  +.+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||.+......  ..
T Consensus        78 ~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~  157 (286)
T d1ob3a_          78 VFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY  157 (286)
T ss_dssp             EEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred             EEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCEEECCCCCCEECCCCCCCC
T ss_conf             99740045678998604775144568999999999998605748826787750568689978732366430114676541


Q ss_pred             EEEEECCCCCCHHHHCCC-CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC--C----------------
Q ss_conf             037522688890234379-989844211123778654369999999999979999998508--9----------------
Q 001412          924 FTICGMADYLAPEIVQGK-GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG--Q----------------  984 (1082)
Q Consensus       924 ~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~--~----------------  984 (1082)
                      ....|++.|+|||.+.+. .++.++|+||||+++|+|++|+.||.+  .+..+.+..+...  .                
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T d1ob3a_         158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG--VSEADQLMRIFRILGTPNSKNWPNVTELPKYD  235 (286)
T ss_dssp             ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             CEECCCCHHHHHHHHHCCCCCCCCEEEHHCCCHHHHHHHCCCCCCC--CCHHHHHHHHHHHHCCCCHHHCCCHHHHHHCC
T ss_conf             0102431101378871788888410021117589999779799898--89899999999863899711042123332214


Q ss_pred             -----------CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf             -----------9999999988999999831369233399999357761999778
Q 001412          985 -----------LSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRD 1027 (1082)
Q Consensus       985 -----------~~~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~ 1027 (1082)
                                 ..++..+++++.+||++||+.||++||++.   |+++||||++
T Consensus       236 ~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~---ell~Hp~f~~  286 (286)
T d1ob3a_         236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAK---QALEHAYFKE  286 (286)
T ss_dssp             TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHH---HHHTSGGGGC
T ss_pred             CCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHCCCCCCC
T ss_conf             33333567646665125899999999998668966890999---9856922074


No 33 
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=0  Score=354.47  Aligned_cols=248  Identities=15%  Similarity=0.199  Sum_probs=214.6

Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCE
Q ss_conf             55767808998846789489999999499939999994020110202499999998333118986621420289841891
Q 001412          765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH  844 (1082)
Q Consensus       765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~  844 (1082)
                      .+..++|++.+.||+|+||.||+|.++.+++.||+|++.+..    ...+.+.+|+.+|+.++| |+|++++++|.+.+.
T Consensus        13 ei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~----~~~~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~   87 (287)
T d1opja_          13 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKH-PNLVQLLGVCTREPP   87 (287)
T ss_dssp             BCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC----SCHHHHHHHHHHHHHCCC-TTBCCEEEEECSSSS
T ss_pred             EECHHHEEEEEEEEECCCEEEEEEEECCCCEEEEEEEECCCC----CHHHHHHHHHHHHHHCCC-CCEECCCCCEEECCE
T ss_conf             745799398659820888089999999999699999977761----039999999999986799-988267752745785


Q ss_pred             EEEEEECCCCCCHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCC
Q ss_conf             899991258889778742----9999999999999999999999987978455699959975799599995278744799
Q 001412          845 AGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG  920 (1082)
Q Consensus       845 ~~lv~E~~~g~~L~~~l~----~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~  920 (1082)
                      +|++|||+.+|+|..++.    ..+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+|+....
T Consensus        88 ~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~  167 (287)
T d1opja_          88 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG  167 (287)
T ss_dssp             CEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCS
T ss_pred             EEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCC
T ss_conf             47876314676067775303554157999999999999978889878930576045768998999289832445465378


Q ss_pred             CCCEE---EEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCCHHHH
Q ss_conf             97303---7522688890234379989844211123778654369999999999979999998508-9999999998899
Q 001412          921 NRTFT---ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG-QLSLPQNLSPEAV  996 (1082)
Q Consensus       921 ~~~~~---~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~-~~~~p~~~s~~~~  996 (1082)
                      .....   ..|++.|+|||++.+..++.++||||||+++|||++|..||... .+....++.+..+ .+.+|..+++++.
T Consensus       168 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~l~  246 (287)
T d1opja_         168 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLEKDYRMERPEGCPEKVY  246 (287)
T ss_dssp             SSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTT-CCHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred             CCCEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf             8722103556654666927872799981043021789999998679988774-259999999855888888743309999


Q ss_pred             HHHHHHCCCCCCCCCCCCCHHH
Q ss_conf             9999831369233399999357
Q 001412          997 DLLTKLLVVDENTRLGSQGPTS 1018 (1082)
Q Consensus       997 ~li~~lL~~dp~~R~s~~~~~e 1018 (1082)
                      +||.+||..||++||++.++.+
T Consensus       247 ~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         247 ELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHCCCCHHHCCCHHHHHH
T ss_conf             9999975779768939999999


No 34 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=355.03  Aligned_cols=247  Identities=21%  Similarity=0.292  Sum_probs=204.3

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE------C
Q ss_conf             7808998846789489999999499939999994020110202499999998333118986621420289841------8
Q 001412          769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD------S  842 (1082)
Q Consensus       769 ~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~------~  842 (1082)
                      -+|+.++.||+|+||+||+|+++.+++.||+|++.+...       ...+|+.+|++++|+ +|++++++|..      .
T Consensus        20 ~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-------~~~~Ei~il~~l~h~-niv~~~~~~~~~~~~~~~   91 (350)
T d1q5ka_          20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHC-NIVRLRYFFYSSGEKKDE   91 (350)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-------SCCHHHHHHHHCCCT-TBCCEEEEEEEC--CCSC
T ss_pred             CCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEECCCCH-------HHHHHHHHHHHCCCC-CCCCEEEEEEECCCCCCC
T ss_conf             776751698217683999999999997999999881606-------899999999866898-987387899744765773


Q ss_pred             CEEEEEEECCCCCCHHHHHC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC-CEEEEECCCCC
Q ss_conf             91899991258889778742-----9999999999999999999999987978455699959975799-59999527874
Q 001412          843 MHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG-HLQLVDFRFGK  916 (1082)
Q Consensus       843 ~~~~lv~E~~~g~~L~~~l~-----~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g-~vkL~DFg~a~  916 (1082)
                      .++|++|||+.++.+..+..     ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++
T Consensus        92 ~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~  171 (350)
T d1q5ka_          92 VYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK  171 (350)
T ss_dssp             CEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCE
T ss_pred             EEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEECCCCHH
T ss_conf             18999984168860788886310368999999999999999999999866876457886037873589711673366054


Q ss_pred             CCCC-CCCEEEEECCCCCCHHHHCC-CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC-----------
Q ss_conf             4799-97303752268889023437-9989844211123778654369999999999979999998508-----------
Q 001412          917 GLSG-NRTFTICGMADYLAPEIVQG-KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG-----------  983 (1082)
Q Consensus       917 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~-----------  983 (1082)
                      .+.. ....+.+||+.|+|||.+.+ ..++.++||||+||++|+|++|+.||..  .+..+.+..+.+.           
T Consensus       172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~--~~~~~~l~~i~~~~g~~~~~~~~~  249 (350)
T d1q5ka_         172 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEIIKVLGTPTREQIRE  249 (350)
T ss_dssp             ECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCC--SSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred             HCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCEEEEEHHHCCCCCCC--CCHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             404776532002555556827764046888210002465277855028799898--799999999999748981776543


Q ss_pred             ------CCC------------CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf             ------999------------999999889999998313692333999993577619997789
Q 001412          984 ------QLS------------LPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028 (1082)
Q Consensus       984 ------~~~------------~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~ 1028 (1082)
                            ...            ..+.+++++.+||.+||..||.+|||+.   |+|+||||+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~---e~L~Hp~f~~~  309 (350)
T d1q5ka_         250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL---EACAHSFFDEL  309 (350)
T ss_dssp             HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHH---HHHTSGGGGGG
T ss_pred             HCCCHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHCCHHHCCC
T ss_conf             0621011035544567444431568999999999997658955792999---99669845246


No 35 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=354.72  Aligned_cols=254  Identities=20%  Similarity=0.261  Sum_probs=212.3

Q ss_pred             CCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE-----
Q ss_conf             767808998846789489999999499939999994020110202499999998333118986621420289841-----
Q 001412          767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD-----  841 (1082)
Q Consensus       767 ~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~-----  841 (1082)
                      .+++|++++.||+|+||+||+|+++.+++.||+|++.+.... ......+.+|+.+|+.++|+ +|++++..+..     
T Consensus         8 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l~h~-nii~~~~~~~~~~~~~   85 (318)
T d3blha1           8 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLKHE-NVVNLIEICRTKASPY   85 (318)
T ss_dssp             BGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CT-TSSCHHHHHHHHHHHHCCCT-TBCCEEEEEEC-----
T ss_pred             CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC-HHHHHHHHHHHHHHHHHCCC-CCCCEEEEEECCCCCC
T ss_conf             627988999972274829999999899979999998422246-37899999999999983599-9660676540246544


Q ss_pred             ---CCEEEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCC
Q ss_conf             ---891899991258889778742--999999999999999999999998797845569995997579959999527874
Q 001412          842 ---SMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK  916 (1082)
Q Consensus       842 ---~~~~~lv~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~  916 (1082)
                         ...+|++||++.++.+.....  ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus        86 ~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~  165 (318)
T d3blha1          86 NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR  165 (318)
T ss_dssp             -----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             CCCCCEEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHEEECCCCCEEEEECCEEE
T ss_conf             44576389998535787410122203443308999999999999988522998856767222036689968763135002


Q ss_pred             CCCC------CCCEEEEECCCCCCHHHHCCC-CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf             4799------973037522688890234379-989844211123778654369999999999979999998508999999
Q 001412          917 GLSG------NRTFTICGMADYLAPEIVQGK-GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQ  989 (1082)
Q Consensus       917 ~~~~------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~  989 (1082)
                      .+..      ....+.+||+.|+|||++.+. .++.++||||+||++|+|++|+.||.+  .+.......+......++.
T Consensus       166 ~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~--~~~~~~~~~i~~~~~~~~~  243 (318)
T d3blha1         166 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG--NTEQHQLALISQLCGSITP  243 (318)
T ss_dssp             ECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHHHCCCCT
T ss_pred             ECCCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEHHHCCCCCCC--CCHHHHHHHHHHHCCCCCH
T ss_conf             23554443211356602497874289970799989178700678646617448799899--8999999999984189982


Q ss_pred             --------------------------------CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf             --------------------------------99988999999831369233399999357761999778
Q 001412          990 --------------------------------NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRD 1027 (1082)
Q Consensus       990 --------------------------------~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~ 1027 (1082)
                                                      ..++++.+||.+||+.||++|+|+.   |+|+||||+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~---elL~Hpff~~  310 (318)
T d3blha1         244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD---DALNHDFFWS  310 (318)
T ss_dssp             TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHH---HHHHSGGGSS
T ss_pred             HHCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHCCHHHCC
T ss_conf             553443203444332013344555033404445998999999998738965890999---9974950156


No 36 
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=0  Score=352.80  Aligned_cols=248  Identities=15%  Similarity=0.205  Sum_probs=214.7

Q ss_pred             CCCCCCCEEEEEEECCCCCEEEEEEEECCCCC---EEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
Q ss_conf             65576780899884678948999999949993---999999402011020249999999833311898662142028984
Q 001412          764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSEN---FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA  840 (1082)
Q Consensus       764 ~~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~---~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~  840 (1082)
                      ..+..++|++.+.||+|+||.||++.++.+++   .+|+|.+....  .....+.+++|+.+|++++ ||+|+++++++.
T Consensus        21 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~   97 (299)
T d1jpaa_          21 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFD-HPNVIHLEGVVT   97 (299)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEC
T ss_pred             HHHCHHHCEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCCC--CHHHHHHHHHHHHHHHHCC-CCCCCCEEEEEE
T ss_conf             2208004278569802788299999995799788999999978445--9899999999999998579-988861899996


Q ss_pred             ECCEEEEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCC
Q ss_conf             1891899991258889778742---9999999999999999999999987978455699959975799599995278744
Q 001412          841 DSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG  917 (1082)
Q Consensus       841 ~~~~~~lv~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~  917 (1082)
                      +....|++|||+.+|+|..++.   +.+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus        98 ~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~  177 (299)
T d1jpaa_          98 KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRF  177 (299)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred             ECCEEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCCEE
T ss_conf             28877999972279853002104567999999999999999988988527983576150448988999199888443157


Q ss_pred             CCCCCC-------EEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHC-CCCCC
Q ss_conf             799973-------03752268889023437998984421112377865436-9999999999979999998508-99999
Q 001412          918 LSGNRT-------FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLP  988 (1082)
Q Consensus       918 ~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~i~~~-~~~~p  988 (1082)
                      +.....       ....||+.|+|||++.+..++.++|||||||++|||+| |+.||.+  .+..+....+..+ .++.|
T Consensus       178 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~--~~~~~~~~~i~~~~~~~~~  255 (299)
T d1jpaa_         178 LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD--MTNQDVINAIEQDYRLPPP  255 (299)
T ss_dssp             ------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT--CCHHHHHHHHHTTCCCCCC
T ss_pred             CCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC--CCHHHHHHHHHCCCCCCCC
T ss_conf             56777765365025666883003878883699786121445357899998679999999--9999999999737889997


Q ss_pred             CCCCHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf             9999889999998313692333999993
Q 001412          989 QNLSPEAVDLLTKLLVVDENTRLGSQGP 1016 (1082)
Q Consensus       989 ~~~s~~~~~li~~lL~~dp~~R~s~~~~ 1016 (1082)
                      ..++.++.+|+.+||..||.+||++.++
T Consensus       256 ~~~~~~l~~li~~cl~~~P~~RPs~~ei  283 (299)
T d1jpaa_         256 MDCPSALHQLMLDCWQKDRNHRPKFGQI  283 (299)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             CCCHHHHHHHHHHHCCCCHHHCCCHHHH
T ss_conf             4226999999999758797689299999


No 37 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=354.78  Aligned_cols=253  Identities=19%  Similarity=0.293  Sum_probs=214.8

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE-----C
Q ss_conf             67808998846789489999999499939999994020110202499999998333118986621420289841-----8
Q 001412          768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD-----S  842 (1082)
Q Consensus       768 ~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~-----~  842 (1082)
                      .++|++++.||+|+||+||+|+++.+++.||+|++.+... .......+.+|+.+|+.++|++ |++++.++..     .
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~h~~-iv~~~~~~~~~~~~~~   94 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHEN-VIGLLDVFTPARSLEE   94 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTS-SHHHHHHHHHHHHHHHHCCCTT-BCCCSEEECSCSSTTT
T ss_pred             CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCHHC-CHHHHHHHHHHHHHHHHCCCCC-EEEEEEEEEECCCCCC
T ss_conf             9871888898317883999999999997999999882002-8689999999999998668987-4259999963464566


Q ss_pred             CEEEEEEECCCCCCHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC
Q ss_conf             91899991258889778742-99999999999999999999999879784556999599757995999952787447999
Q 001412          843 MHAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN  921 (1082)
Q Consensus       843 ~~~~lv~E~~~g~~L~~~l~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~  921 (1082)
                      ...+++++++.|++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+|++|||++.... .
T Consensus        95 ~~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~-~  173 (348)
T d2gfsa1          95 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-D  173 (348)
T ss_dssp             CCCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCT-G
T ss_pred             CCEEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC-C
T ss_conf             864999996258862320022453099999999999999999973887651667763345543220013210001257-5


Q ss_pred             CCEEEEECCCCCCHHHHCCCC-CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC--------------
Q ss_conf             730375226888902343799-89844211123778654369999999999979999998508999--------------
Q 001412          922 RTFTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLS--------------  986 (1082)
Q Consensus       922 ~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~--------------  986 (1082)
                      ...+..||+.|+|||+..+.. ++.++|+|||||++|+|++|..||.+  .+.......+......              
T Consensus       174 ~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  251 (348)
T d2gfsa1         174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHIDQLKLILRLVGTPGAELLKKISSESA  251 (348)
T ss_dssp             GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHHHCCCCHHHHTTCCCHHH
T ss_pred             CCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHHHCCCCCHHHHHHCCCHHH
T ss_conf             444434543555835533775678551243205899999768899788--988999999997307997577320010244


Q ss_pred             ---------C--------CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf             ---------9--------99999889999998313692333999993577619997789
Q 001412          987 ---------L--------PQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028 (1082)
Q Consensus       987 ---------~--------p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~ 1028 (1082)
                               .        ...+++++.+||.+||+.||.+|+|+.   |+|+||||+.+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~---elL~Hp~f~~~  307 (348)
T d2gfsa1         252 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA---QALAHAYFAQY  307 (348)
T ss_dssp             HHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHH---HHHTSGGGTTT
T ss_pred             HHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHCCHHHCCC
T ss_conf             544430355787555662678999999999997758834593899---98559954879


No 38 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=354.66  Aligned_cols=255  Identities=14%  Similarity=0.223  Sum_probs=218.7

Q ss_pred             CCCCCEEEEEE-ECCCCCEEEEEEEECCC--CCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC
Q ss_conf             57678089988-46789489999999499--9399999940201102024999999983331189866214202898418
Q 001412          766 VSLTDMEWRKC-LYSTDCSEIGLVLLRDS--ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS  842 (1082)
Q Consensus       766 ~~~~~y~i~~~-LG~G~~g~V~~~~~~~~--~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~  842 (1082)
                      +.-++|.+... ||+|+||.||++.++.+  +..+|+|++.+..  .....+.+.+|+.+|++++| |+|+++++++.+ 
T Consensus         5 l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~E~~il~~l~H-pnIv~l~g~~~~-   80 (285)
T d1u59a_           5 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDN-PYIVRLIGVCQA-   80 (285)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCC-TTBCCEEEEEES-
T ss_pred             ECCCCEEECCCEEECCCCEEEEEEEEECCCCCEEEEEEEECHHC--CHHHHHHHHHHHHHHHHCCC-CCEEEEEEEECC-
T ss_conf             54447188784873060809999999608976899999988203--97899999999999986799-888068656036-


Q ss_pred             CEEEEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCC
Q ss_conf             91899991258889778742---999999999999999999999998797845569995997579959999527874479
Q 001412          843 MHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS  919 (1082)
Q Consensus       843 ~~~~lv~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~  919 (1082)
                      +.+|+||||+++|+|.+++.   ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.+.
T Consensus        81 ~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~  160 (285)
T d1u59a_          81 EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG  160 (285)
T ss_dssp             SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred             CEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEECCCHHHHCCC
T ss_conf             80799998078996899752125699999999999999998789986881057676466045468854203313421155


Q ss_pred             CCCC-----EEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCC
Q ss_conf             9973-----03752268889023437998984421112377865436-9999999999979999998508-999999999
Q 001412          920 GNRT-----FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQNLS  992 (1082)
Q Consensus       920 ~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~i~~~-~~~~p~~~s  992 (1082)
                      ....     ...+||+.|+|||++.+..++.++||||||+++|||+| |+.||.+  .+..++...+..+ .+.+|+.++
T Consensus       161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~--~~~~~~~~~i~~~~~~~~p~~~~  238 (285)
T d1u59a_         161 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK--MKGPEVMAFIEQGKRMECPPECP  238 (285)
T ss_dssp             TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT--CCTHHHHHHHHTTCCCCCCTTCC
T ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCHHHHHHHHHCCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCC
T ss_conf             4343211356211374335868872799995412322017899999389999999--79999999998189999997678


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCC
Q ss_conf             8899999983136923339999935776199977
Q 001412          993 PEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026 (1082)
Q Consensus       993 ~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~ 1026 (1082)
                      +++.+||.+||..||++||++.++.+.|+|+|+.
T Consensus       239 ~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         239 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHH
T ss_conf             9999999997577976890999999999999998


No 39 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=351.63  Aligned_cols=253  Identities=18%  Similarity=0.242  Sum_probs=209.1

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC----E
Q ss_conf             780899884678948999999949993999999402011020249999999833311898662142028984189----1
Q 001412          769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM----H  844 (1082)
Q Consensus       769 ~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~----~  844 (1082)
                      ++|++++.||+|+||+||+|.++.+++.||+|++.+..  .......+++|+.+|+.++|+ +|++++..+....    .
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l~hp-~iv~~~~~~~~~~~~~~~   84 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTIEQMK   84 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCT-TBCCCCEEECCSSTTTCC
T ss_pred             CCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHC--CHHHHHHHHHHHHHHHHCCCC-CCCCEEEEEEECCCCCCC
T ss_conf             98599789940648099999999999499999980310--958999999999999976898-988588899505645541


Q ss_pred             EEEEEECCCCCCHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC--
Q ss_conf             899991258889778742-99999999999999999999999879784556999599757995999952787447999--
Q 001412          845 AGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--  921 (1082)
Q Consensus       845 ~~lv~E~~~g~~L~~~l~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~--  921 (1082)
                      .+++++++.|++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....  
T Consensus        85 ~~~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~  164 (345)
T d1pmea_          85 DVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD  164 (345)
T ss_dssp             CEEEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred             EEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCCCCC
T ss_conf             49999962598656644058999999999999999999999978986777876437887999778754570565047776


Q ss_pred             ---CCEEEEECCCCCCHHHHCC-CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC--C-----------
Q ss_conf             ---7303752268889023437-9989844211123778654369999999999979999998508--9-----------
Q 001412          922 ---RTFTICGMADYLAPEIVQG-KGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG--Q-----------  984 (1082)
Q Consensus       922 ---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~--~-----------  984 (1082)
                         .....+||+.|+|||++.. ..++.++|+||+|+++|+|++|+.||.+  .+.......+...  .           
T Consensus       165 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (345)
T d1pmea_         165 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG--KHYLDQLNHILGILGSPSQEDLNCIIN  242 (345)
T ss_dssp             BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHHHCSCCHHHHHTCCC
T ss_pred             CCEEECCCCCCCEECHHHHHHCCCCCCCHHHHHCCCCEEHHHHHCCCCCCC--CCHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf             410101102652000387860478887410100467013377669799788--888999998765206997566423433


Q ss_pred             -----------C-------CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf             -----------9-------99999998899999983136923339999935776199977899
Q 001412          985 -----------L-------SLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVD 1029 (1082)
Q Consensus       985 -----------~-------~~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~~ 1029 (1082)
                                 .       ...+.+++++++||.+||+.||.+||++.   ++|+||||+...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~---e~L~hpf~~~~~  302 (345)
T d1pmea_         243 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE---QALAHPYLEQYY  302 (345)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHH---HHHTSGGGTTTC
T ss_pred             HHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHCCHHHCCCC
T ss_conf             222202446775577877783789999999999997648956790899---986198655588


No 40 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=345.42  Aligned_cols=255  Identities=18%  Similarity=0.234  Sum_probs=217.3

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEE
Q ss_conf             67808998846789489999999499939999994020110202499999998333118986621420289841891899
Q 001412          768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL  847 (1082)
Q Consensus       768 ~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~l  847 (1082)
                      +++|++++.||+|+||+||+|++..+++.||+|++.+.. .......++.+|+.+|+.++|+ +|++++.+|.+..+.++
T Consensus         1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~E~~il~~l~h~-niv~~~~~~~~~~~~~i   78 (292)
T d1unla_           1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHK-NIVRLHDVLHSDKKLTL   78 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-SSTTHHHHHHHHHHHHTTCCCT-TBCCEEEEEECSSEEEE
T ss_pred             CCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHH-CCHHHHHHHHHHHHHHHHCCCC-CEEEECCCCCCCCCEEE
T ss_conf             999786269712868199999999999699999980321-7868999999999999856757-88821354444431158


Q ss_pred             EEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC--CC
Q ss_conf             991258889778742--99999999999999999999999879784556999599757995999952787447999--73
Q 001412          848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--RT  923 (1082)
Q Consensus       848 v~E~~~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~--~~  923 (1082)
                      +++++.+++|..++.  +.+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||.++.....  ..
T Consensus        79 v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~  158 (292)
T d1unla_          79 VFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY  158 (292)
T ss_dssp             EEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCC
T ss_pred             EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCC
T ss_conf             86302332221121235654036789999999999877433998600146761211337826652046011046887510


Q ss_pred             EEEEECCCCCCHHHHCCCC-CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC-------------------
Q ss_conf             0375226888902343799-89844211123778654369999999999979999998508-------------------
Q 001412          924 FTICGMADYLAPEIVQGKG-HGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG-------------------  983 (1082)
Q Consensus       924 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~-------------------  983 (1082)
                      ....+++.|+|||++.+.. ++.++|+||+||++|+|++|+.||... .+..+.+..+...                   
T Consensus       159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (292)
T d1unla_         159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG-NDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK  237 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC-SSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred             EEECCCCCHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
T ss_conf             01034431014667506988880444026541889985189999889-99999999998611899735513443222113


Q ss_pred             ----------CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf             ----------999999999889999998313692333999993577619997789
Q 001412          984 ----------QLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028 (1082)
Q Consensus       984 ----------~~~~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~ 1028 (1082)
                                ....+..+++.+.+||.+||+.||.+|||++   |+|+||||+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~---e~L~Hp~f~~~  289 (292)
T d1unla_         238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAE---EALQHPYFSDF  289 (292)
T ss_dssp             CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHH---HHTTSGGGSSC
T ss_pred             CCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHCCHHHCCC
T ss_conf             34445443104330656899999999998649966890999---99649534079


No 41 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=349.76  Aligned_cols=253  Identities=19%  Similarity=0.293  Sum_probs=213.3

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE------
Q ss_conf             67808998846789489999999499939999994020110202499999998333118986621420289841------
Q 001412          768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD------  841 (1082)
Q Consensus       768 ~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~------  841 (1082)
                      +++|++++.||+|+||+||+|.++.+++.||+|++.+... .......+.+|+.+|+.++ |++|++++++|..      
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~-hpnIv~~~~~f~~~~~~~~   93 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKTLEE   93 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTS-SHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCCSTTT
T ss_pred             CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHC-CHHHHHHHHHHHHHHHHCC-CCCEEEEEEEEECCCCCCC
T ss_conf             3775998896217585999999999998999999882336-9799999999999998648-9876489989702564345


Q ss_pred             CCEEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC
Q ss_conf             89189999125888977874299999999999999999999999879784556999599757995999952787447999
Q 001412          842 SMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN  921 (1082)
Q Consensus       842 ~~~~~lv~E~~~g~~L~~~l~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~  921 (1082)
                      ..++|++|||+.+ ++...+...+++..++.++.||+.||.|||++||+||||||+|||++.++.++++|||+++.....
T Consensus        94 ~~~~~iv~Ey~~~-~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~  172 (355)
T d2b1pa1          94 FQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  172 (355)
T ss_dssp             CCEEEEEEECCSE-EHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             CCEEEEEEECCCH-HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECHHHHHCCCCC
T ss_conf             7626999841446-778765038999999999999999998865221124567763211365443132010232114666


Q ss_pred             -CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH------------------
Q ss_conf             -7303752268889023437998984421112377865436999999999997999999850------------------
Q 001412          922 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAK------------------  982 (1082)
Q Consensus       922 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~------------------  982 (1082)
                       .....+||+.|+|||++.+..++.++|+||+||++|+|++|+.||.+  .+.......+..                  
T Consensus       173 ~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (355)
T d2b1pa1         173 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG--RDYIDQWNKVIEQLGTPCPEFMKKLQPTVR  250 (355)
T ss_dssp             --------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred             CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC--CCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf             553322146555581331477778774333566257898659899888--977889999997205898799987656677


Q ss_pred             ----CCCCCC--------------------CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf             ----899999--------------------9999889999998313692333999993577619997789
Q 001412          983 ----GQLSLP--------------------QNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDV 1028 (1082)
Q Consensus       983 ----~~~~~p--------------------~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~~~ 1028 (1082)
                          ......                    ...++++.+||++||..||++|||++   ++|+||||+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~---elL~Hpw~~~~  317 (355)
T d2b1pa1         251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD---DALQHPYINVW  317 (355)
T ss_dssp             HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHH---HHHTSTTTGGG
T ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHCCCCCCCC
T ss_conf             77641754356664212643335432101333799999999998769945790899---99669420878


No 42 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=351.32  Aligned_cols=249  Identities=17%  Similarity=0.240  Sum_probs=214.3

Q ss_pred             EEECCCCCEEEEEEEECC--CCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEEECC
Q ss_conf             884678948999999949--993999999402011020249999999833311898662142028984189189999125
Q 001412          775 KCLYSTDCSEIGLVLLRD--SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY  852 (1082)
Q Consensus       775 ~~LG~G~~g~V~~~~~~~--~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~lv~E~~  852 (1082)
                      +.||+|+||.||++.+..  +++.+|+|++.... ........+++|+.+|++++| |+|+++++++.+ +..|+||||+
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~H-pnIv~~~g~~~~-~~~~lvmE~~   89 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDN-PYIVRMIGICEA-ESWMLVMEMA   89 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCC-TTBCCEEEEEES-SSEEEEEECC
T ss_pred             CCCCCCCCEEEEEEEECCCCCCEEEEEEEECHHH-CCHHHHHHHHHHHHHHHHCCC-CCCCEEEEEECC-CCEEEEEECC
T ss_conf             7834587829999998169738599999988010-898999999999999986799-898527777505-9779999747


Q ss_pred             CCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCC-----EE
Q ss_conf             8889778742--9999999999999999999999987978455699959975799599995278744799973-----03
Q 001412          853 LACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT-----FT  925 (1082)
Q Consensus       853 ~g~~L~~~l~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~~~-----~~  925 (1082)
                      ++|+|.+++.  ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.+.....     ..
T Consensus        90 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~  169 (277)
T d1xbba_          90 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  169 (277)
T ss_dssp             TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC---
T ss_pred             CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
T ss_conf             88968999752257899999999999999976687479556777611310235675123413453313432344322445


Q ss_pred             EEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHC
Q ss_conf             752268889023437998984421112377865436-9999999999979999998508-99999999988999999831
Q 001412          926 ICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQNLSPEAVDLLTKLL 1003 (1082)
Q Consensus       926 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~lL 1003 (1082)
                      ..||+.|+|||++.+..++.++||||||+++|||++ |+.||.+  .+..++...+..+ .+.+|..+++++.+||.+||
T Consensus       170 ~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~--~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl  247 (277)
T d1xbba_         170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG--MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCW  247 (277)
T ss_dssp             -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT--CCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCCCEECCCHHHCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf             67784203916653799984344303403132896589999999--8999999999828999998656799999999975


Q ss_pred             CCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf             3692333999993577619997789
Q 001412         1004 VVDENTRLGSQGPTSVKTHPWFRDV 1028 (1082)
Q Consensus      1004 ~~dp~~R~s~~~~~eil~hp~f~~~ 1028 (1082)
                      ..||.+||++.++.+.|+|+|++.+
T Consensus       248 ~~dp~~RPs~~~i~~~L~~~~~~~~  272 (277)
T d1xbba_         248 TYDVENRPGFAAVELRLRNYYYDVV  272 (277)
T ss_dssp             CSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHCCCHHHHHHHHHCHHHHCC
T ss_conf             8897689098999998528875047


No 43 
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=346.63  Aligned_cols=246  Identities=14%  Similarity=0.219  Sum_probs=213.3

Q ss_pred             CCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEE
Q ss_conf             57678089988467894899999994999399999940201102024999999983331189866214202898418918
Q 001412          766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA  845 (1082)
Q Consensus       766 ~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~  845 (1082)
                      +..++|++++.||+|+||.||++.++ +++.+|+|++.+..    ...+.+.+|+.+++.++| |+|+++++++.+....
T Consensus         2 idp~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~----~~~~~~~~E~~~l~~l~H-pnIv~~~g~~~~~~~~   75 (263)
T d1sm2a_           2 IDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA----MSEEDFIEEAEVMMKLSH-PKLVQLYGVCLEQAPI   75 (263)
T ss_dssp             BCCSCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSS----SCHHHHHHHHHHHHHCCC-TTBCCEEEEECSSSSC
T ss_pred             CCHHHCEEEEEEEECCCEEEEEEEEC-CCCEEEEEEECCCC----CCHHHHHHHHHHHHHCCC-CCCCCCCCEECCCCCE
T ss_conf             89699588889820888299999988-99999999987886----768999999999996689-9756535243159933


Q ss_pred             EEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC-
Q ss_conf             99991258889778742---99999999999999999999999879784556999599757995999952787447999-
Q 001412          846 GLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN-  921 (1082)
Q Consensus       846 ~lv~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~-  921 (1082)
                      ++||||+.+|+|.+++.   ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++..... 
T Consensus        76 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~  155 (263)
T d1sm2a_          76 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ  155 (263)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC---------
T ss_pred             EEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHEEECCCCCEEECCCCHHEECCCCC
T ss_conf             79998369991899752013478899999999999998776531643104431532666688776865532100236887


Q ss_pred             --CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCC-CCCCCCCCCCHHHHHHHHHHC-CCCCCCCCCHHHHH
Q ss_conf             --73037522688890234379989844211123778654369-999999999979999998508-99999999988999
Q 001412          922 --RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQG-EMPFGSWRESEIDIVAKIAKG-QLSLPQNLSPEAVD  997 (1082)
Q Consensus       922 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg-~~pf~~~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~  997 (1082)
                        ......||+.|+|||++.+..++.++||||||+++|||+|+ .+||..  .+..+....+..+ ....|..+++++.+
T Consensus       156 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~--~~~~~~~~~i~~~~~~~~p~~~~~~l~~  233 (263)
T d1sm2a_         156 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--RSNSEVVEDISTGFRLYKPRLASTHVYQ  233 (263)
T ss_dssp             ---------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS--CCHHHHHHHHHHTCCCCCCTTSCHHHHH
T ss_pred             CEEECCEECCCCCCCHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCC--CCHHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf             33504300176667857860799984033210599999998789888778--9999999999806888995436799999


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHCC
Q ss_conf             9998313692333999993577619
Q 001412          998 LLTKLLVVDENTRLGSQGPTSVKTH 1022 (1082)
Q Consensus       998 li~~lL~~dp~~R~s~~~~~eil~h 1022 (1082)
                      |+.+||+.||++||++.   ++++|
T Consensus       234 li~~cl~~~p~~Rps~~---~il~~  255 (263)
T d1sm2a_         234 IMNHCWKERPEDRPAFS---RLLRQ  255 (263)
T ss_dssp             HHHHHTCSSGGGSCCHH---HHHHH
T ss_pred             HHHHHCCCCHHHCCCHH---HHHHH
T ss_conf             99997657976891999---99999


No 44 
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=346.42  Aligned_cols=250  Identities=14%  Similarity=0.220  Sum_probs=212.1

Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCE
Q ss_conf             55767808998846789489999999499939999994020110202499999998333118986621420289841891
Q 001412          765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH  844 (1082)
Q Consensus       765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~  844 (1082)
                      .+..++|++.+.||+|+||.||++.++ ++..+|+|++.+..    ...+.+.+|+.++.+++| ++|+++++++.+ +.
T Consensus         9 ei~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~H-pnIv~~~g~~~~-~~   81 (272)
T d1qpca_           9 EVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS----MSPDAFLAEANLMKQLQH-QRLVRLYAVVTQ-EP   81 (272)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS----SCHHHHHHHHHHHHHCCC-TTBCCEEEEECS-SS
T ss_pred             ECCHHHEEEEEEEECCCCCEEEEEEEC-CCCEEEEEEECCCC----CCHHHHHHHHHHHHHCCC-CCEEEEEEEECC-CC
T ss_conf             038899388679810798289999999-99999999986476----888999999999986799-988578731045-97


Q ss_pred             EEEEEECCCCCCHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCC
Q ss_conf             899991258889778742----9999999999999999999999987978455699959975799599995278744799
Q 001412          845 AGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG  920 (1082)
Q Consensus       845 ~~lv~E~~~g~~L~~~l~----~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~  920 (1082)
                      .|+||||+.+|+|..++.    .++++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+|+.+..
T Consensus        82 ~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~  161 (272)
T d1qpca_          82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED  161 (272)
T ss_dssp             CEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             EEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEECCCCCEEECCC
T ss_conf             69999957898288887514789887889999999999999999748954675642251562024404234101477358


Q ss_pred             CCC---EEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCC-CCCCCCCCCHHHHHHHHHHC-CCCCCCCCCHHH
Q ss_conf             973---0375226888902343799898442111237786543699-99999999979999998508-999999999889
Q 001412          921 NRT---FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGE-MPFGSWRESEIDIVAKIAKG-QLSLPQNLSPEA  995 (1082)
Q Consensus       921 ~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~-~pf~~~~~~~~~~~~~i~~~-~~~~p~~~s~~~  995 (1082)
                      ...   ....||+.|+|||++.+..++.++||||||+++|||+||. +||..  .+..+....+..+ .+..|..+++++
T Consensus       162 ~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~--~~~~~~~~~i~~~~~~~~p~~~~~~l  239 (272)
T d1qpca_         162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEEL  239 (272)
T ss_dssp             SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT--CCHHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC--CCHHHHHHHHHHCCCCCCCCCCHHHH
T ss_conf             8644203567744445828983799982456452579999999689888888--89999999997068888965571999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCHHHHHC--CCCCC
Q ss_conf             99999831369233399999357761--99977
Q 001412          996 VDLLTKLLVVDENTRLGSQGPTSVKT--HPWFR 1026 (1082)
Q Consensus       996 ~~li~~lL~~dp~~R~s~~~~~eil~--hp~f~ 1026 (1082)
                      .+|+.+||..||++||++.   ++++  |+||.
T Consensus       240 ~~li~~cl~~~P~~Rpt~~---ei~~~L~~~ft  269 (272)
T d1qpca_         240 YQLMRLCWKERPEDRPTFD---YLRSVLEDFFT  269 (272)
T ss_dssp             HHHHHHHTCSSGGGSCCHH---HHHHHHHHHHH
T ss_pred             HHHHHHHCCCCHHHCCCHH---HHHHHHHHHHH
T ss_conf             9999997588976893999---99998611321


No 45 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=341.93  Aligned_cols=253  Identities=12%  Similarity=0.148  Sum_probs=214.5

Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCE
Q ss_conf             55767808998846789489999999499939999994020110202499999998333118986621420289841891
Q 001412          765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH  844 (1082)
Q Consensus       765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~  844 (1082)
                      .+..++|++.+.||+|+||.||++.++.+ ..+|+|++.+..    ...+.+.+|+.++++++|+ +|+++++++.+ +.
T Consensus        13 ~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~----~~~~~~~~E~~~l~~l~h~-nIv~~~g~~~~-~~   85 (285)
T d1fmka3          13 EIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT----MSPEAFLQEAQVMKKLRHE-KLVQLYAVVSE-EP   85 (285)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTS----SCHHHHHHHHHHHHHCCCT-TBCCEEEEECS-SS
T ss_pred             ECCHHHEEEEEEEEECCCEEEEEEEECCC-CEEEEEEECCCC----CCHHHHHHHHHHHHHCCCC-CEEEEEEEEEC-CC
T ss_conf             74779979846993079809999999999-999999988044----8889999999999866667-88689999823-97


Q ss_pred             EEEEEECCCCCCHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCC
Q ss_conf             899991258889778742----9999999999999999999999987978455699959975799599995278744799
Q 001412          845 AGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG  920 (1082)
Q Consensus       845 ~~lv~E~~~g~~L~~~l~----~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~  920 (1082)
                      .++||||+.+|+|..++.    ..+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.+..
T Consensus        86 ~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~  165 (285)
T d1fmka3          86 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED  165 (285)
T ss_dssp             CEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred             EEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCEEECCCCHHHHCCC
T ss_conf             59999944799435420000355305999999999999999987541143353123079998999299844255542568


Q ss_pred             CC---CEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCCHHHH
Q ss_conf             97---3037522688890234379989844211123778654369999999999979999998508-9999999998899
Q 001412          921 NR---TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG-QLSLPQNLSPEAV  996 (1082)
Q Consensus       921 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~-~~~~p~~~s~~~~  996 (1082)
                      ..   .....||+.|+|||++....++.++||||||+++|||++|..||... ....+.+..+..+ ..+++..++.+++
T Consensus       166 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~l~  244 (285)
T d1fmka3         166 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-MVNREVLDQVERGYRMPCPPECPESLH  244 (285)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT-CCHHHHHHHHHTTCCCCCCTTSCHHHH
T ss_pred             CCCEEECCCCCCCCCCCHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf             8733524545566545808983799891774132358999998689999988-889999999982689999832379999


Q ss_pred             HHHHHHCCCCCCCCCCCCCHHHHHC--CCCCCCC
Q ss_conf             9999831369233399999357761--9997789
Q 001412          997 DLLTKLLVVDENTRLGSQGPTSVKT--HPWFRDV 1028 (1082)
Q Consensus       997 ~li~~lL~~dp~~R~s~~~~~eil~--hp~f~~~ 1028 (1082)
                      +||.+||+.||++||++.   ++++  |+||...
T Consensus       245 ~li~~cl~~dP~~Rps~~---~i~~~L~~~~~~~  275 (285)
T d1fmka3         245 DLMCQCWRKEPEERPTFE---YLQAFLEDYFTST  275 (285)
T ss_dssp             HHHHHHTCSSGGGSCCHH---HHHHHHHTTTSCS
T ss_pred             HHHHHHCCCCHHHCCCHH---HHHHHHHHHHCCC
T ss_conf             999997566975891999---9999876662389


No 46 
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=345.14  Aligned_cols=246  Identities=17%  Similarity=0.246  Sum_probs=216.7

Q ss_pred             CCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEE
Q ss_conf             57678089988467894899999994999399999940201102024999999983331189866214202898418918
Q 001412          766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA  845 (1082)
Q Consensus       766 ~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~  845 (1082)
                      +..++|++++.||+|+||.||+++++ +++.||+|++.+...    ....+++|+.++..++| ++|+++++++.+...+
T Consensus         1 ~~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~----~~~~~~~Ev~~~~~l~H-pnIv~~~g~~~~~~~~   74 (258)
T d1k2pa_           1 IDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLSH-EKLVQLYGVCTKQRPI   74 (258)
T ss_dssp             CCCCCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS----CHHHHHHHHHHHHTCCC-TTBCCEEEEECCSSSE
T ss_pred             CCHHHCEEEEEEECCCCEEEEEEEEC-CCCEEEEEEECCCCC----CHHHHHHHHHHHHHCCC-CCEEEEEEEEEECCCE
T ss_conf             99699799689820788399999988-998999999874757----78999999999996689-8601588998507816


Q ss_pred             EEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCC
Q ss_conf             99991258889778742---999999999999999999999998797845569995997579959999527874479997
Q 001412          846 GLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNR  922 (1082)
Q Consensus       846 ~lv~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~~  922 (1082)
                      ++||||+.+|+|..++.   ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+....
T Consensus        75 ~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~  154 (258)
T d1k2pa_          75 FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE  154 (258)
T ss_dssp             EEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSS
T ss_pred             EEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCHHHEECCCCC
T ss_conf             99997048993888641024677689999999999999998754684346654135887699847988614420235787


Q ss_pred             ---CEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCCHHHHH
Q ss_conf             ---303752268889023437998984421112377865436-9999999999979999998508-99999999988999
Q 001412          923 ---TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQNLSPEAVD  997 (1082)
Q Consensus       923 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~  997 (1082)
                         .....||+.|+|||++.+..++.++||||||+++|||+| |+.||..  .+..++...+..+ .+..|...++++.+
T Consensus       155 ~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~--~~~~~~~~~i~~~~~~~~p~~~~~~l~~  232 (258)
T d1k2pa_         155 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER--FTNSETAEHIAQGLRLYRPHLASEKVYT  232 (258)
T ss_dssp             CCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT--SCHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             CEEECCCCCCCCCCCCHHHCCCCCCCCEEECCCCHHHHHHHHCCCCCCCC--CCHHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf             22524657887757807863799885210336432467397559999889--9999999999807978996546599999


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHCC
Q ss_conf             9998313692333999993577619
Q 001412          998 LLTKLLVVDENTRLGSQGPTSVKTH 1022 (1082)
Q Consensus       998 li~~lL~~dp~~R~s~~~~~eil~h 1022 (1082)
                      ||.+||+.||++||++.   ++++|
T Consensus       233 li~~cl~~dP~~RPt~~---eil~~  254 (258)
T d1k2pa_         233 IMYSCWHEKADERPTFK---ILLSN  254 (258)
T ss_dssp             HHHHTTCSSGGGSCCHH---HHHHH
T ss_pred             HHHHHCCCCHHHCCCHH---HHHHH
T ss_conf             99997668976893999---99987


No 47 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=343.31  Aligned_cols=254  Identities=14%  Similarity=0.198  Sum_probs=220.5

Q ss_pred             CCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCE--EEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE
Q ss_conf             35655767808998846789489999999499939--9999940201102024999999983331189866214202898
Q 001412          762 SLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENF--LSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC  839 (1082)
Q Consensus       762 ~~~~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~--~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~  839 (1082)
                      .+..+++++|++.+.||+|+||.||++.++.++..  +|+|.+.+..  .....+.+.+|+.+|..+.+|++|+++++++
T Consensus         3 ~~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~   80 (309)
T d1fvra_           3 IYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGAC   80 (309)
T ss_dssp             CSSBCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEE
T ss_pred             CCCCCCHHHCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEECCCC--CHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf             89966879968877982078828999999899969999999978233--8579999999999998622899883678888


Q ss_pred             EECCEEEEEEECCCCCCHHHHHC------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEE
Q ss_conf             41891899991258889778742------------------999999999999999999999998797845569995997
Q 001412          840 ADSMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML  901 (1082)
Q Consensus       840 ~~~~~~~lv~E~~~g~~L~~~l~------------------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIli  901 (1082)
                      .++..+|+||||+++|+|.++++                  ..+++..+..++.||+.||.|+|+++|+||||||+|||+
T Consensus        81 ~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~  160 (309)
T d1fvra_          81 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV  160 (309)
T ss_dssp             EETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             ECCCEEEEEEEECCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
T ss_conf             41873699998028986999986403555551231012345789999999999999999876630895455505204898


Q ss_pred             CCCCCEEEEECCCCCCCCCC-CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCC-CCCCCCCCCHHHHHHH
Q ss_conf             57995999952787447999-730375226888902343799898442111237786543699-9999999997999999
Q 001412          902 DKSGHLQLVDFRFGKGLSGN-RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGE-MPFGSWRESEIDIVAK  979 (1082)
Q Consensus       902 d~~g~vkL~DFg~a~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~-~pf~~~~~~~~~~~~~  979 (1082)
                      +.++.+||+|||+++..... ......||+.|+|||.+.+..++.++||||||+++|||++|. +||.+  .+..+++..
T Consensus       161 ~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~--~~~~~~~~~  238 (309)
T d1fvra_         161 GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG--MTCAELYEK  238 (309)
T ss_dssp             CGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT--CCHHHHHHH
T ss_pred             CCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCC--CCHHHHHHH
T ss_conf             688763874344322444223455301377555538752699996221531388999998368999999--999999999


Q ss_pred             HHHC-CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCC
Q ss_conf             8508-999999999889999998313692333999993577619
Q 001412          980 IAKG-QLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTH 1022 (1082)
Q Consensus       980 i~~~-~~~~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~h 1022 (1082)
                      +..+ .+.+|..+++++.+||.+||..||++||++.   ++++|
T Consensus       239 i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~---eil~~  279 (309)
T d1fvra_         239 LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFA---QILVS  279 (309)
T ss_dssp             GGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHH---HHHHH
T ss_pred             HHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHHH
T ss_conf             982688888766789999999997678966894999---99999


No 48 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=342.72  Aligned_cols=251  Identities=14%  Similarity=0.205  Sum_probs=209.6

Q ss_pred             CCCCCEEEEEEECCCCCEEEEEEEECC-----CCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
Q ss_conf             576780899884678948999999949-----993999999402011020249999999833311898662142028984
Q 001412          766 VSLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA  840 (1082)
Q Consensus       766 ~~~~~y~i~~~LG~G~~g~V~~~~~~~-----~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~  840 (1082)
                      +..++|++.+.||+|+||.||++.+..     +++.+|+|++.+..  .......+.+|..++.++.||++|+.++..+.
T Consensus        10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~   87 (299)
T d1ywna1          10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT   87 (299)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             CCHHHEEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECCCC--CCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
T ss_conf             1679979844984167839999998677755578399999986001--71789999999999886149984997411540


Q ss_pred             E-CCEEEEEEECCCCCCHHHHHC------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEE
Q ss_conf             1-891899991258889778742------------------999999999999999999999998797845569995997
Q 001412          841 D-SMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML  901 (1082)
Q Consensus       841 ~-~~~~~lv~E~~~g~~L~~~l~------------------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIli  901 (1082)
                      + +..++++|||+++|+|.++++                  ..+++..++.++.||+.||.|||+++|+||||||+|||+
T Consensus        88 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl  167 (299)
T d1ywna1          88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL  167 (299)
T ss_dssp             STTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             CCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
T ss_conf             47975799998458992999998536666653222023321468999999999999999998873797178677310657


Q ss_pred             CCCCCEEEEECCCCCCCCCC----CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCC-CCCCCCCCCCHHHH
Q ss_conf             57995999952787447999----73037522688890234379989844211123778654369-99999999997999
Q 001412          902 DKSGHLQLVDFRFGKGLSGN----RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQG-EMPFGSWRESEIDI  976 (1082)
Q Consensus       902 d~~g~vkL~DFg~a~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg-~~pf~~~~~~~~~~  976 (1082)
                      +.++.+||+|||+|+.....    .....+||+.|+|||++.+..++.++|||||||++|||+++ ..||.+.... ...
T Consensus       168 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~-~~~  246 (299)
T d1ywna1         168 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEF  246 (299)
T ss_dssp             CGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-HHH
T ss_pred             CCCCCEEECCCCCHHHCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHH-HHH
T ss_conf             7998289845752001135665222475166721020368646889966322136789999986889999899989-999


Q ss_pred             HHHHHHC-CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCC
Q ss_conf             9998508-999999999889999998313692333999993577619
Q 001412          977 VAKIAKG-QLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTH 1022 (1082)
Q Consensus       977 ~~~i~~~-~~~~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~h 1022 (1082)
                      ...+..+ .+.+|..+++++.+||.+||+.||++||++.   ++++|
T Consensus       247 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~---eil~~  290 (299)
T d1ywna1         247 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS---ELVEH  290 (299)
T ss_dssp             HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH---HHHHH
T ss_pred             HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHH---HHHHH
T ss_conf             999963898888865789999999997677966791999---99999


No 49 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=341.71  Aligned_cols=248  Identities=17%  Similarity=0.230  Sum_probs=211.4

Q ss_pred             CCCCCEEEEEEECCCCCEEEEEEEECCCCC----EEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
Q ss_conf             576780899884678948999999949993----9999994020110202499999998333118986621420289841
Q 001412          766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD  841 (1082)
Q Consensus       766 ~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~----~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~  841 (1082)
                      +.-++|++++.||+|+||.||++.+..+++    .+|+|.+....  .....+.+++|+.++++++| |+|+++++++.+
T Consensus         6 ~k~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H-pnIv~l~g~~~~   82 (317)
T d1xkka_           6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDN-PHVCRLLGICLT   82 (317)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHCCC-TTBCCEEEEEES
T ss_pred             CCHHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEEEECCCC--CHHHHHHHHHHHHHHHHCCC-CCEEEEEEEEEC
T ss_conf             888999783198208992999999958998898999999965134--97999999999999986799-888158999961


Q ss_pred             CCEEEEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCC
Q ss_conf             891899991258889778742---99999999999999999999999879784556999599757995999952787447
Q 001412          842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGL  918 (1082)
Q Consensus       842 ~~~~~lv~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~  918 (1082)
                      + ..+++++++.+++|...+.   ..+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.+
T Consensus        83 ~-~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~  161 (317)
T d1xkka_          83 S-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  161 (317)
T ss_dssp             S-SEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHT
T ss_pred             C-CEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEECCCCCEEEECCCCCEEC
T ss_conf             9-836999842687401011133457999999999999999999998769504762120311679987586025522233


Q ss_pred             CCCC----CEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCC
Q ss_conf             9997----303752268889023437998984421112377865436-9999999999979999998508-999999999
Q 001412          919 SGNR----TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQNLS  992 (1082)
Q Consensus       919 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~i~~~-~~~~p~~~s  992 (1082)
                      ....    .....||+.|+|||++.+..++.++||||||+++|||+| |..||.+  .+..++...+..+ .+..|..++
T Consensus       162 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~--~~~~~~~~~i~~~~~~~~p~~~~  239 (317)
T d1xkka_         162 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IPASEISSILEKGERLPQPPICT  239 (317)
T ss_dssp             TTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT--SCGGGHHHHHHHTCCCCCCTTBC
T ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCC
T ss_conf             5444532236510586446708874699983565440799999999779999999--99899999997599899985568


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCHHHHHCC
Q ss_conf             889999998313692333999993577619
Q 001412          993 PEAVDLLTKLLVVDENTRLGSQGPTSVKTH 1022 (1082)
Q Consensus       993 ~~~~~li~~lL~~dp~~R~s~~~~~eil~h 1022 (1082)
                      +++.+|+.+||..||.+||++.   ++++|
T Consensus       240 ~~~~~li~~cl~~dP~~RPs~~---eil~~  266 (317)
T d1xkka_         240 IDVYMIMVKCWMIDADSRPKFR---ELIIE  266 (317)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHH---HHHHH
T ss_pred             HHHHHHHHHHCCCCHHHCCCHH---HHHHH
T ss_conf             9999999984789934691999---99999


No 50 
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=345.70  Aligned_cols=248  Identities=13%  Similarity=0.189  Sum_probs=204.7

Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCE
Q ss_conf             55767808998846789489999999499939999994020110202499999998333118986621420289841891
Q 001412          765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH  844 (1082)
Q Consensus       765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~  844 (1082)
                      .+..++|++.+.||+|+||.||+++.+.   .+|+|++..... .....+.+.+|+.+|++++|+ +|+++++++. ...
T Consensus         4 ei~~~~~~~~~~lG~G~fg~Vy~~~~~~---~vAvK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hp-nIv~~~~~~~-~~~   77 (276)
T d1uwha_           4 EIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHV-NILLFMGYST-APQ   77 (276)
T ss_dssp             BCCTTCCCCCSEEEECSSCEEEEEESSS---EEEEEECCCSSC-CTTHHHHHHHHHHHHTTCCCT-TBCCEEEEEC-SSS
T ss_pred             CCCCCCEEEEEEEEECCCCEEEEEEECC---EEEEEEEECCCC-CHHHHHHHHHHHHHHHHCCCC-CEEEEEEEEE-CCE
T ss_conf             3154518998898307885899999999---899999973469-989999999999999847998-7864567971-558


Q ss_pred             EEEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC
Q ss_conf             899991258889778742---99999999999999999999999879784556999599757995999952787447999
Q 001412          845 AGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN  921 (1082)
Q Consensus       845 ~~lv~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~  921 (1082)
                      ++++|||+.||+|.+++.   ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+|+.....
T Consensus        78 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~  157 (276)
T d1uwha_          78 LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW  157 (276)
T ss_dssp             CEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC----
T ss_pred             EEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHEEECCCCCEEECCCCCEEECCCC
T ss_conf             99999658998889998523578999999999999999988875099951614789979818997887500221333556


Q ss_pred             ----CCEEEEECCCCCCHHHHCCC---CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC-----CCCC
Q ss_conf             ----73037522688890234379---98984421112377865436999999999997999999850899-----9999
Q 001412          922 ----RTFTICGMADYLAPEIVQGK---GHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQL-----SLPQ  989 (1082)
Q Consensus       922 ----~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~-----~~p~  989 (1082)
                          ...+..||+.|+|||++.+.   .++.++||||||+++|||+||+.||.+. .........+..+..     .++.
T Consensus       158 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~-~~~~~~~~~~~~~~~~p~~~~~~~  236 (276)
T d1uwha_         158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI-NNRDQIIFMVGRGYLSPDLSKVRS  236 (276)
T ss_dssp             --------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC-CCHHHHHHHHHHTSCCCCGGGSCT
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHHCCCCCCCCHHCCC
T ss_conf             7763125665574317999995056899995315163599999999788998998-969999999965888986000365


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCC
Q ss_conf             999889999998313692333999993577619
Q 001412          990 NLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTH 1022 (1082)
Q Consensus       990 ~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~h 1022 (1082)
                      .+++++.+||.+||..||.+||++.   +++++
T Consensus       237 ~~~~~l~~li~~cl~~dp~~RPt~~---~il~~  266 (276)
T d1uwha_         237 NCPKAMKRLMAECLKKKRDERPLFP---QILAS  266 (276)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH---HHHHH
T ss_pred             CCHHHHHHHHHHHCCCCHHHCCCHH---HHHHH
T ss_conf             5549999999997588976892999---99999


No 51 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=338.52  Aligned_cols=248  Identities=13%  Similarity=0.131  Sum_probs=211.2

Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEECCCC----CEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
Q ss_conf             557678089988467894899999994999----3999999402011020249999999833311898662142028984
Q 001412          765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSE----NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA  840 (1082)
Q Consensus       765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~----~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~  840 (1082)
                      .+..++|++.+.||+|+||.||++.++.++    ..+|+|++....  .......+++|+.++++++| ++|+++++++.
T Consensus         3 ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~H-~nIv~~~g~~~   79 (283)
T d1mqba_           3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSH-HNIIRLEGVIS   79 (283)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCC-TTBCCEEEEEC
T ss_pred             CCCHHHEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEEECCCC--CHHHHHHHHHHHHHHHHCCC-CCEEEEEEEEE
T ss_conf             5788996861598117790999999968998787999999988445--96899999999999985689-87832367783


Q ss_pred             ECCEEEEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCC
Q ss_conf             1891899991258889778742---9999999999999999999999987978455699959975799599995278744
Q 001412          841 DSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKG  917 (1082)
Q Consensus       841 ~~~~~~lv~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~  917 (1082)
                      +....+++|||+.+++|..++.   ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus        80 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~  159 (283)
T d1mqba_          80 KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV  159 (283)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             CCCCEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHC
T ss_conf             38803899972135740222102345420899999999999854121212342576564427888998499845510300


Q ss_pred             CCCCC-----CEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC-CCCCCCCC
Q ss_conf             79997-----3037522688890234379989844211123778654369999999999979999998508-99999999
Q 001412          918 LSGNR-----TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG-QLSLPQNL  991 (1082)
Q Consensus       918 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~-~~~~p~~~  991 (1082)
                      +....     .....||+.|+|||++.+..++.++||||||+++|||+++..|+... .+..+.+..+..+ .++.|..+
T Consensus       160 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~  238 (283)
T d1mqba_         160 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE-LSNHEVMKAINDGFRLPTPMDC  238 (283)
T ss_dssp             --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT-CCHHHHHHHHHTTCCCCCCTTC
T ss_pred             CCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC-CCHHHHHHHHHCCCCCCCCHHH
T ss_conf             357876526742677773434888870499997355634489899999679886556-8999999998635789985045


Q ss_pred             CHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf             9889999998313692333999993
Q 001412          992 SPEAVDLLTKLLVVDENTRLGSQGP 1016 (1082)
Q Consensus       992 s~~~~~li~~lL~~dp~~R~s~~~~ 1016 (1082)
                      +.++.+||.+||..||++||++.++
T Consensus       239 ~~~l~~li~~cl~~~p~~RPt~~ei  263 (283)
T d1mqba_         239 PSAIYQLMMQCWQQERARRPKFADI  263 (283)
T ss_dssp             BHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             HHHHHHHHHHHCCCCHHHCCCHHHH
T ss_conf             7999999999776797689399999


No 52 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=339.49  Aligned_cols=251  Identities=15%  Similarity=0.153  Sum_probs=216.1

Q ss_pred             CCCCCEEEEEEECCCCCEEEEEEEECCCC-C--EEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC
Q ss_conf             57678089988467894899999994999-3--99999940201102024999999983331189866214202898418
Q 001412          766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSE-N--FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS  842 (1082)
Q Consensus       766 ~~~~~y~i~~~LG~G~~g~V~~~~~~~~~-~--~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~  842 (1082)
                      +..+||++++.||+|+||.||++++..+. +  .||+|++.+.........+.+.+|+.+|+.++ |++|+++++++.+ 
T Consensus         5 i~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~~~g~~~~-   82 (273)
T d1u46a_           5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVLT-   82 (273)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC-CTTBCCEEEEECS-
T ss_pred             ECHHHEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCC-CCCEEEEEEEEEE-
T ss_conf             86489199789803888399999998899907999999998355579899999999999998689-9998789877740-


Q ss_pred             CEEEEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCC
Q ss_conf             91899991258889778742---999999999999999999999998797845569995997579959999527874479
Q 001412          843 MHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS  919 (1082)
Q Consensus       843 ~~~~lv~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~  919 (1082)
                      ...+++|||+.+++|...+.   +.+++..+..++.||+.||.|||+++|+||||||+||+++.++.+||+|||+++.+.
T Consensus        83 ~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~  162 (273)
T d1u46a_          83 PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP  162 (273)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred             CCHHEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHCCCCCCCEEECCCHHHHHCC
T ss_conf             10011465423861254442126899999999999999999987521787520566888156556543325611555303


Q ss_pred             CCCC-----EEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHCC--CCCCCCC
Q ss_conf             9973-----03752268889023437998984421112377865436-99999999999799999985089--9999999
Q 001412          920 GNRT-----FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKGQ--LSLPQNL  991 (1082)
Q Consensus       920 ~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~i~~~~--~~~p~~~  991 (1082)
                      ....     ....|++.|+|||++.+..++.++||||||+++|||+| |..||.+  .+..+....+.+..  ++.+..+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~--~~~~~~~~~i~~~~~~~~~~~~~  240 (273)
T d1u46a_         163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG--LNGSQILHKIDKEGERLPRPEDC  240 (273)
T ss_dssp             C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT--CCHHHHHHHHHTSCCCCCCCTTC
T ss_pred             CCCCCCEECCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC--CCHHHHHHHHHHCCCCCCCCCCC
T ss_conf             5887526547632573107999983799994215661489999999689999999--69999999998479999985445


Q ss_pred             CHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf             98899999983136923339999935776
Q 001412          992 SPEAVDLLTKLLVVDENTRLGSQGPTSVK 1020 (1082)
Q Consensus       992 s~~~~~li~~lL~~dp~~R~s~~~~~eil 1020 (1082)
                      ++++.+||.+||..||++||++.++.+.|
T Consensus       241 ~~~l~~li~~cl~~dp~~RPt~~ei~~~L  269 (273)
T d1u46a_         241 PQDIYNVMVQCWAHKPEDRPTFVALRDFL  269 (273)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CHHHHHHHHHHCCCCHHHCCCHHHHHHHH
T ss_conf             39999999997688966792999999999


No 53 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=335.93  Aligned_cols=253  Identities=14%  Similarity=0.209  Sum_probs=217.6

Q ss_pred             CCCCCCCEEEEEEECCCCCEEEEEEEECCCC-------CEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEE
Q ss_conf             6557678089988467894899999994999-------399999940201102024999999983331189866214202
Q 001412          764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSE-------NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQIL  836 (1082)
Q Consensus       764 ~~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~-------~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~  836 (1082)
                      ..+..++|++.+.||+|+||.||+|++..++       ..||+|++.+...  ......+.+|...+..+.+||+|++++
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~e~~~l~~~~~HpnIv~~~   85 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT--EKDLSDLISEMEMMKMIGKHKNIINLL   85 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCCCHHHEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCC--HHHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf             722589969700985167828999998578755566754999999881128--688999999999999813999697346


Q ss_pred             EEEEECCEEEEEEECCCCCCHHHHHC------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
Q ss_conf             89841891899991258889778742------------------999999999999999999999998797845569995
Q 001412          837 CTCADSMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV  898 (1082)
Q Consensus       837 ~~~~~~~~~~lv~E~~~g~~L~~~l~------------------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~N  898 (1082)
                      +++.++...++||||+.+|+|.+++.                  ..+++..+..++.||+.||.|||+++|+||||||+|
T Consensus        86 ~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~N  165 (299)
T d1fgka_          86 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN  165 (299)
T ss_dssp             EEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             CCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC
T ss_conf             52201886899997369990999998606776432223345743467999999999999999987663797863022102


Q ss_pred             EEECCCCCEEEEECCCCCCCCCC----CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCC-CCCCCCCCCCCH
Q ss_conf             99757995999952787447999----7303752268889023437998984421112377865436-999999999997
Q 001412          899 LMLDKSGHLQLVDFRFGKGLSGN----RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESE  973 (1082)
Q Consensus       899 Ilid~~g~vkL~DFg~a~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~  973 (1082)
                      ||++.++.+||+|||+++.....    .....+||+.|+|||.+.+..++.++||||||+++|+|++ |..||.+  .+.
T Consensus       166 iLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~--~~~  243 (299)
T d1fgka_         166 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--VPV  243 (299)
T ss_dssp             EEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT--CCH
T ss_pred             EEECCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC--CCH
T ss_conf             245478976762211101135555543146678884663266751798882555477588888740179898999--999


Q ss_pred             HHHHHHHHHC-CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf             9999998508-9999999998899999983136923339999935776
Q 001412          974 IDIVAKIAKG-QLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVK 1020 (1082)
Q Consensus       974 ~~~~~~i~~~-~~~~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil 1020 (1082)
                      ...+..+..+ .+.+|..+++++.+||.+||+.||++||++.++.+.|
T Consensus       244 ~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L  291 (299)
T d1fgka_         244 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL  291 (299)
T ss_dssp             HHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHH
T ss_conf             999999972888898743529999999997667976793999999999


No 54 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=336.12  Aligned_cols=249  Identities=18%  Similarity=0.293  Sum_probs=212.8

Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEECCCC---CEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
Q ss_conf             557678089988467894899999994999---39999994020110202499999998333118986621420289841
Q 001412          765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSE---NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD  841 (1082)
Q Consensus       765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~---~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~  841 (1082)
                      .+..++|++.+.||+|+||.||++.+..++   ..+|+|.+.+..  .......+.+|+.++++++| |+|+++++++.+
T Consensus         3 ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~E~~~l~~l~H-pnIv~l~~~~~~   79 (273)
T d1mp8a_           3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDH-PHIVKLIGVITE   79 (273)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCC-TTBCCEEEEECS
T ss_pred             CCCHHHEEEEEEEEECCCCEEEEEEEECCCCEEEEEEEEEECCCC--CHHHHHHHHHHHHHHHHCCC-CCEEEEEEEEEC
T ss_conf             768899698779930788299999993699644999999936566--87999999999999986899-998569889953


Q ss_pred             CCEEEEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCC
Q ss_conf             891899991258889778742---99999999999999999999999879784556999599757995999952787447
Q 001412          842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGL  918 (1082)
Q Consensus       842 ~~~~~lv~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~  918 (1082)
                       ..+|++|||+.+|+|..++.   ..+++..++.++.||+.||.|||+++|+||||||+||+++.++.+||+|||+++.+
T Consensus        80 -~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~  158 (273)
T d1mp8a_          80 -NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  158 (273)
T ss_dssp             -SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             -CEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHEEECCCCCEEECCCHHHEEC
T ss_conf             -7479999840698077654224789999999999999987752302267441410265532067896787650342133


Q ss_pred             CCC---CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCCH
Q ss_conf             999---7303752268889023437998984421112377865436-9999999999979999998508-9999999998
Q 001412          919 SGN---RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQNLSP  993 (1082)
Q Consensus       919 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~i~~~-~~~~p~~~s~  993 (1082)
                      ...   ......||+.|+|||++.+..++.++||||||+++|||++ |.+||..  .+..+++..+..+ .+++|+.+++
T Consensus       159 ~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~--~~~~~~~~~i~~~~~~~~~~~~~~  236 (273)
T d1mp8a_         159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVIGRIENGERLPMPPNCPP  236 (273)
T ss_dssp             ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTT--CCGGGHHHHHHTTCCCCCCTTCCH
T ss_pred             CCCCCEECCCEECCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCH
T ss_conf             677623305400583103266751699887452444247899998269999888--999999999981899989877799


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCHHHHHCC
Q ss_conf             89999998313692333999993577619
Q 001412          994 EAVDLLTKLLVVDENTRLGSQGPTSVKTH 1022 (1082)
Q Consensus       994 ~~~~li~~lL~~dp~~R~s~~~~~eil~h 1022 (1082)
                      ++.+||.+||..||++||++.   ++++|
T Consensus       237 ~~~~li~~cl~~dp~~Rps~~---ei~~~  262 (273)
T d1mp8a_         237 TLYSLMTKCWAYDPSRRPRFT---ELKAQ  262 (273)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHH---HHHHH
T ss_pred             HHHHHHHHHCCCCHHHCCCHH---HHHHH
T ss_conf             999999997687976892999---99999


No 55 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=0  Score=335.55  Aligned_cols=250  Identities=15%  Similarity=0.201  Sum_probs=214.2

Q ss_pred             CCCCEEEEEEECCCCCEEEEEEEECC-----CCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
Q ss_conf             76780899884678948999999949-----9939999994020110202499999998333118986621420289841
Q 001412          767 SLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD  841 (1082)
Q Consensus       767 ~~~~y~i~~~LG~G~~g~V~~~~~~~-----~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~  841 (1082)
                      ..++|++++.||+|+||.||+|+.+.     +++.+|+|++.+..  .......+.+|+.+|+.++|++ |+++++++.+
T Consensus        11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l~h~n-iv~~~~~~~~   87 (301)
T d1lufa_          11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPN-IVKLLGVCAV   87 (301)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTT-BCCEEEEECS
T ss_pred             CHHHCEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECHHC--CHHHHHHHHHHHHHHHHCCCCC-CCCCEEEECC
T ss_conf             988938867982078839999998887657788299999988210--8579999999999999668997-6552466605


Q ss_pred             CCEEEEEEECCCCCCHHHHHC--------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCC
Q ss_conf             891899991258889778742--------------------------999999999999999999999998797845569
Q 001412          842 SMHAGLLLNTYLACPLASILH--------------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVS  895 (1082)
Q Consensus       842 ~~~~~lv~E~~~g~~L~~~l~--------------------------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLk  895 (1082)
                      ....+++|||+.+++|.+++.                          ..+++..+..++.|++.||+|||+++|+|||||
T Consensus        88 ~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlK  167 (301)
T d1lufa_          88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA  167 (301)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf             98038999815899299999852755421000011100121034678898999999999999998554135786854884


Q ss_pred             CCCEEECCCCCEEEEECCCCCCCCCC----CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCC-CCCCCCC
Q ss_conf             99599757995999952787447999----730375226888902343799898442111237786543699-9999999
Q 001412          896 PDVLMLDKSGHLQLVDFRFGKGLSGN----RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGE-MPFGSWR  970 (1082)
Q Consensus       896 p~NIlid~~g~vkL~DFg~a~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~-~pf~~~~  970 (1082)
                      |+|||++.++.+||+|||+|+.+...    ...+.+||+.|+|||.+.+..++.++||||||+++|||++|. +||.+  
T Consensus       168 p~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~--  245 (301)
T d1lufa_         168 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG--  245 (301)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT--
T ss_pred             CCCEEECCCCCEEECCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCC--
T ss_conf             011689899928983314421136776411157777676767989972688980563025236299998068999999--


Q ss_pred             CCHHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHC
Q ss_conf             99799999985089-9999999988999999831369233399999357761
Q 001412          971 ESEIDIVAKIAKGQ-LSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021 (1082)
Q Consensus       971 ~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~ 1021 (1082)
                      .+..+....+..+. +.+|..+++++.+||.+||+.||.+||++.++.+.|+
T Consensus       246 ~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~  297 (301)
T d1lufa_         246 MAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ  297 (301)
T ss_dssp             SCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf             8999999999739978887325299999999974889657939999999999


No 56 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=330.22  Aligned_cols=253  Identities=13%  Similarity=0.206  Sum_probs=211.9

Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEEC-----CCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE
Q ss_conf             557678089988467894899999994-----999399999940201102024999999983331189866214202898
Q 001412          765 KVSLTDMEWRKCLYSTDCSEIGLVLLR-----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC  839 (1082)
Q Consensus       765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~-----~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~  839 (1082)
                      .+..++|++.+.||+|+||.||+|.+.     .+++.+|+|++.+..  .......+.+|..+++.+.+|++|+++++++
T Consensus        19 ~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~   96 (311)
T d1t46a_          19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGAC   96 (311)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCCHHHEEEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCC--CHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf             37789969854982068829999998066447788699999987424--8779999999999987626999887899898


Q ss_pred             EECCEEEEEEECCCCCCHHHHHC--------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCE
Q ss_conf             41891899991258889778742--------------------9999999999999999999999987978455699959
Q 001412          840 ADSMHAGLLLNTYLACPLASILH--------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVL  899 (1082)
Q Consensus       840 ~~~~~~~lv~E~~~g~~L~~~l~--------------------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NI  899 (1082)
                      .+....|++|||+.+++|..+++                    ..+++..+..++.||+.||.|||+++++||||||+||
T Consensus        97 ~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NI  176 (311)
T d1t46a_          97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI  176 (311)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             EECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCC
T ss_conf             31997899997379987999998535665444445332223345889999999999999999988757926662410210


Q ss_pred             EECCCCCEEEEECCCCCCCCCCCC----EEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCC-CCCCCCCCCCCHH
Q ss_conf             975799599995278744799973----03752268889023437998984421112377865436-9999999999979
Q 001412          900 MLDKSGHLQLVDFRFGKGLSGNRT----FTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEI  974 (1082)
Q Consensus       900 lid~~g~vkL~DFg~a~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~  974 (1082)
                      +++.++.+|++|||.++.......    ...+||+.|+|||++.+..++.++||||||+++|+|+| |.+||... ....
T Consensus       177 l~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~-~~~~  255 (311)
T d1t46a_         177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PVDS  255 (311)
T ss_dssp             EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-CSSH
T ss_pred             CCCCCCCCCCCCCCHHEECCCCCCCEEEEECCCCHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC-CHHH
T ss_conf             000257521023401023367886158620135968767788617999974001025899999985899887789-9899


Q ss_pred             HHHHHHHHC-CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf             999998508-9999999998899999983136923339999935776
Q 001412          975 DIVAKIAKG-QLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVK 1020 (1082)
Q Consensus       975 ~~~~~i~~~-~~~~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil 1020 (1082)
                      ...+.+..+ .+..|..+++++.+||.+||..||.+||++.++.+.|
T Consensus       256 ~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L  302 (311)
T d1t46a_         256 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI  302 (311)
T ss_dssp             HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHH
T ss_conf             99999866898898543659999999997577965792999999999


No 57 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=0  Score=338.29  Aligned_cols=252  Identities=14%  Similarity=0.191  Sum_probs=208.1

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEE
Q ss_conf             78089988467894899999994999399999940201102024999999983331189866214202898418918999
Q 001412          769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL  848 (1082)
Q Consensus       769 ~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~lv  848 (1082)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++.....     ...+..|..+++.+.|+++|+.++.++.+....+++
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~iv   81 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   81 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT-----SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEE
T ss_pred             CEEEEEEEEEECCCCEEEEEEECCCCCEEEEEEECHHCC-----CHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEE
T ss_conf             889996898507880999999988998999999721005-----888999999999703899601799999519877899


Q ss_pred             EECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEC---CCCCEEEEECCCCCCCCCC-
Q ss_conf             91258889778742---9999999999999999999999987978455699959975---7995999952787447999-
Q 001412          849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD---KSGHLQLVDFRFGKGLSGN-  921 (1082)
Q Consensus       849 ~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid---~~g~vkL~DFg~a~~~~~~-  921 (1082)
                      ||++.+ +|...+.   ..+++..+..++.|++.||+|||++||+||||||+|||++   .+..++|+|||+|+.+... 
T Consensus        82 me~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~  160 (299)
T d1ckia_          82 MELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  160 (299)
T ss_dssp             EECCCC-BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTT
T ss_pred             EEECCC-CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEEEEECCCCCEECCCCC
T ss_conf             987387-1333244306887689999999999999999997994426678766064335777615650467513425544


Q ss_pred             --------CCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHH-HHHHHHHH----CC-CCC
Q ss_conf             --------73037522688890234379989844211123778654369999999999979-99999850----89-999
Q 001412          922 --------RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEI-DIVAKIAK----GQ-LSL  987 (1082)
Q Consensus       922 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~i~~----~~-~~~  987 (1082)
                              ...+.+||+.|+|||++.+..++.++||||||+++|+|++|+.||........ ........    .. ...
T Consensus       161 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (299)
T d1ckia_         161 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL  240 (299)
T ss_dssp             TCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHH
T ss_pred             CCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCHHHEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf             55410001357767873532999991899898321886177899998498766553057799999985235678983575


Q ss_pred             CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCC
Q ss_conf             999998899999983136923339999935776199977
Q 001412          988 PQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFR 1026 (1082)
Q Consensus       988 p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~hp~f~ 1026 (1082)
                      +..+++++.+|+.+||..||++||++..+.++|+|+|.+
T Consensus       241 ~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             TTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHH
T ss_conf             347889999999998439955791999999999999997


No 58 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=330.40  Aligned_cols=260  Identities=15%  Similarity=0.199  Sum_probs=218.7

Q ss_pred             CCCCCCCEEEEEEECCCCCEEEEEEEECC-----CCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEE
Q ss_conf             65576780899884678948999999949-----9939999994020110202499999998333118986621420289
Q 001412          764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCT  838 (1082)
Q Consensus       764 ~~~~~~~y~i~~~LG~G~~g~V~~~~~~~-----~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~  838 (1082)
                      ..+..++|++.+.||+|+||.||+|.++.     ++..||+|++.+..  .......+.+|+.+++++.| ++|++++++
T Consensus        15 ~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l~h-~nIv~~~~~   91 (308)
T d1p4oa_          15 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNC-HHVVRLLGV   91 (308)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCC-TTBCCEEEE
T ss_pred             EEECHHHEEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEEECCCC--CHHHHHHHHHHHHHHHHCCC-CCEEEEEEE
T ss_conf             042689918835982078818999998786447789689999987012--86899999999999997699-988412547


Q ss_pred             EEECCEEEEEEECCCCCCHHHHHC------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCC
Q ss_conf             841891899991258889778742------------99999999999999999999999879784556999599757995
Q 001412          839 CADSMHAGLLLNTYLACPLASILH------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH  906 (1082)
Q Consensus       839 ~~~~~~~~lv~E~~~g~~L~~~l~------------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~  906 (1082)
                      +......+++|||+.+|+|.+++.            ..+++..+..++.+++.||.|||+++|+||||||+|||++.++.
T Consensus        92 ~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~  171 (308)
T d1p4oa_          92 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT  171 (308)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCC
T ss_pred             EECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECEECCCCEEECCCCE
T ss_conf             84288106777604899889998750332113444688799999999999999999876479654328677540359964


Q ss_pred             EEEEECCCCCCCCCCC----CEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCC-CCCCCCCCCCHHHHHHHHH
Q ss_conf             9999527874479997----3037522688890234379989844211123778654369-9999999999799999985
Q 001412          907 LQLVDFRFGKGLSGNR----TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQG-EMPFGSWRESEIDIVAKIA  981 (1082)
Q Consensus       907 vkL~DFg~a~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg-~~pf~~~~~~~~~~~~~i~  981 (1082)
                      +||+|||+++.+....    .....||+.|+|||.+.+..++.++|+||||+++|||+|| .+||.+  .+..+.+..+.
T Consensus       172 ~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~--~~~~~~~~~i~  249 (308)
T d1p4oa_         172 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVM  249 (308)
T ss_dssp             EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT--SCHHHHHHHHH
T ss_pred             EEEEECCCCEECCCCCCEEECCCEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC--CCHHHHHHHHH
T ss_conf             9994245420235776303134023163237888873699883334443789999999689999999--89999999998


Q ss_pred             HC-CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHC---CCCCCCC
Q ss_conf             08-99999999988999999831369233399999357761---9997789
Q 001412          982 KG-QLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVKT---HPWFRDV 1028 (1082)
Q Consensus       982 ~~-~~~~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil~---hp~f~~~ 1028 (1082)
                      .+ .+..|..+++.+.++|.+||+.||++||++.++.+.|+   +|+|..+
T Consensus       250 ~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~~  300 (308)
T d1p4oa_         250 EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV  300 (308)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHH
T ss_pred             HCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCCCCCC
T ss_conf             088888863353999999999757796589399999999787617787577


No 59 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=332.54  Aligned_cols=242  Identities=17%  Similarity=0.252  Sum_probs=211.0

Q ss_pred             CCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE-C
Q ss_conf             655767808998846789489999999499939999994020110202499999998333118986621420289841-8
Q 001412          764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD-S  842 (1082)
Q Consensus       764 ~~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~-~  842 (1082)
                      ..+++++|++.+.||+|+||.||++.++  +..+|+|++.+..     ..+.+.+|+.++++++| ++|+++++++.+ .
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~~-----~~~~~~~E~~~l~~l~H-pnIv~~~g~~~~~~   73 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRH-SNLVQLLGVIVEEK   73 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC-------HHHHHTHHHHTTCCC-TTBCCEEEEECCC-
T ss_pred             CCCCHHHEEEEEEEECCCCEEEEEEEEC--CEEEEEEEECCHH-----HHHHHHHHHHHHHHCCC-CCEEEEEEEEEECC
T ss_conf             9557899488579820798089999999--9099999988577-----79999999999986789-89854987887238


Q ss_pred             CEEEEEEECCCCCCHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCC
Q ss_conf             91899991258889778742----99999999999999999999999879784556999599757995999952787447
Q 001412          843 MHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGL  918 (1082)
Q Consensus       843 ~~~~lv~E~~~g~~L~~~l~----~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~  918 (1082)
                      ..+|+||||+.+|+|.+++.    ..+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus        74 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~  153 (262)
T d1byga_          74 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA  153 (262)
T ss_dssp             -CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----
T ss_pred             CCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHEECCCCCEEECCCCCCEEC
T ss_conf             92899996369998999987457888899999999999985232113376553666567601468997763245600344


Q ss_pred             CCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCCHHHH
Q ss_conf             9997303752268889023437998984421112377865436-9999999999979999998508-9999999998899
Q 001412          919 SGNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQ-GEMPFGSWRESEIDIVAKIAKG-QLSLPQNLSPEAV  996 (1082)
Q Consensus       919 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~i~~~-~~~~p~~~s~~~~  996 (1082)
                      ... ..+..+|+.|+|||++.+..++.++||||||+++|||+| |++||..  .+..++...+..+ .+++|..+++++.
T Consensus       154 ~~~-~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~  230 (262)
T d1byga_         154 SST-QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR--IPLKDVVPRVEKGYKMDAPDGCPPAVY  230 (262)
T ss_dssp             ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT--SCGGGHHHHHTTTCCCCCCTTCCHHHH
T ss_pred             CCC-CCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCHHHH
T ss_conf             787-76556664677817872798885887775799999999789999999--999999999980899999765799999


Q ss_pred             HHHHHHCCCCCCCCCCCCCH
Q ss_conf             99998313692333999993
Q 001412          997 DLLTKLLVVDENTRLGSQGP 1016 (1082)
Q Consensus       997 ~li~~lL~~dp~~R~s~~~~ 1016 (1082)
                      +||.+||..||.+||++.++
T Consensus       231 ~li~~cl~~dP~~Rps~~~l  250 (262)
T d1byga_         231 EVMKNCWHLDAAMRPSFLQL  250 (262)
T ss_dssp             HHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHHHCCCCHHHCCCHHHH
T ss_conf             99999756697689399999


No 60 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=0  Score=325.37  Aligned_cols=246  Identities=14%  Similarity=0.224  Sum_probs=205.9

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEE
Q ss_conf             78089988467894899999994999399999940201102024999999983331189866214202898418918999
Q 001412          769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL  848 (1082)
Q Consensus       769 ~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~lv  848 (1082)
                      ++|++.+.||+|+||.||+|++..+++.+|+|++.+...     ...+.+|...++.+.|+++++.++.++.+....+++
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~v   79 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV   79 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred             CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCC-----CHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEE
T ss_conf             806997998417882999999988997999999750258-----299999999999964899987799996018811799


Q ss_pred             EECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC-----CCCEEEEECCCCCCCCC
Q ss_conf             91258889778742---99999999999999999999999879784556999599757-----99599995278744799
Q 001412          849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-----SGHLQLVDFRFGKGLSG  920 (1082)
Q Consensus       849 ~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~-----~g~vkL~DFg~a~~~~~  920 (1082)
                      ||++ +++|..++.   ..++...+..++.|++.||.|||++||+||||||+|||++.     .+.+||+|||+|+.+..
T Consensus        80 me~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~  158 (293)
T d1csna_          80 IDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  158 (293)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             EEEC-CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCCCCEEECCCCEEEECCC
T ss_conf             9964-888799997520311068999999999999999997796626677131523475434479568723660577146


Q ss_pred             ---------CCCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC-CHHHHHHHHHHCC-----C
Q ss_conf             ---------973037522688890234379989844211123778654369999999999-9799999985089-----9
Q 001412          921 ---------NRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRE-SEIDIVAKIAKGQ-----L  985 (1082)
Q Consensus       921 ---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-~~~~~~~~i~~~~-----~  985 (1082)
                               ....+++||+.|+|||++.+..++.++|+||||+++|+|++|..||.+... .....+..+....     .
T Consensus       159 ~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~  238 (293)
T d1csna_         159 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLR  238 (293)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHH
T ss_pred             CCCCCCEEECCCCCEEECHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH
T ss_conf             76654111024676277510267989648888869998983199999986987678853021999999997056799958


Q ss_pred             CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf             99999998899999983136923339999935776
Q 001412          986 SLPQNLSPEAVDLLTKLLVVDENTRLGSQGPTSVK 1020 (1082)
Q Consensus       986 ~~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~eil 1020 (1082)
                      .+++.+++++.+++..|+..+|++||+++.+.+++
T Consensus       239 ~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l  273 (293)
T d1csna_         239 ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLF  273 (293)
T ss_dssp             HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHH
T ss_pred             HHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf             96579989999999998439930085999999999


No 61 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=317.75  Aligned_cols=244  Identities=16%  Similarity=0.192  Sum_probs=203.1

Q ss_pred             EEEEEECCCCCEEEEEEEECCCCC---EEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE-CCEEEE
Q ss_conf             899884678948999999949993---9999994020110202499999998333118986621420289841-891899
Q 001412          772 EWRKCLYSTDCSEIGLVLLRDSEN---FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD-SMHAGL  847 (1082)
Q Consensus       772 ~i~~~LG~G~~g~V~~~~~~~~~~---~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~-~~~~~l  847 (1082)
                      .+.+.||+|+||+||++.+..++.   .+|+|.+.+..  .......+.+|+.+|++++| ++|+++++++.+ +...++
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H-pnIv~~~g~~~~~~~~~~l  106 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSH-PNVLSLLGICLRSEGSPLV  106 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCC--CHHHHHHHHHHHHHHHTCCC-TTBCCCCEEEEETTTEEEE
T ss_pred             CCCEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCCC--CHHHHHHHHHHHHHHHHCCC-CCEEEEEEEEEECCCCEEE
T ss_conf             26669813688099999997799879999999988436--97899999999999986789-9986786789806994389


Q ss_pred             EEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCC--
Q ss_conf             991258889778742---999999999999999999999998797845569995997579959999527874479997--
Q 001412          848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNR--  922 (1082)
Q Consensus       848 v~E~~~g~~L~~~l~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~~--  922 (1082)
                      ||||+.+++|..++.   ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++.+....  
T Consensus       107 v~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~  186 (311)
T d1r0pa_         107 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD  186 (311)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC
T ss_pred             EEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCCCEEEECCCCHHHCCCCCCC
T ss_conf             99874067414421013454048999999999887652003367625776687576779998899106523225566555


Q ss_pred             ----CEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCCHHHHH
Q ss_conf             ----3037522688890234379989844211123778654369999999999979999998508-99999999988999
Q 001412          923 ----TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKG-QLSLPQNLSPEAVD  997 (1082)
Q Consensus       923 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~  997 (1082)
                          .....||+.|+|||.+.+..++.++||||||+++|||++|..||... .+..+....+..+ .+..|..+++++.+
T Consensus       187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~-~~~~~~~~~i~~g~~~~~p~~~~~~l~~  265 (311)
T d1r0pa_         187 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-VNTFDITVYLLQGRRLLQPEYCPDPLYE  265 (311)
T ss_dssp             CTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             CCEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHCCCCCCCCCCCCHHHHH
T ss_conf             310025655564556768874379997457466199999999789999888-9999999999808988996447599999


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHCC
Q ss_conf             9998313692333999993577619
Q 001412          998 LLTKLLVVDENTRLGSQGPTSVKTH 1022 (1082)
Q Consensus       998 li~~lL~~dp~~R~s~~~~~eil~h 1022 (1082)
                      ||.+||..||++||++.   ++++|
T Consensus       266 li~~cl~~dP~~RPs~~---ei~~~  287 (311)
T d1r0pa_         266 VMLKCWHPKAEMRPSFS---ELVSR  287 (311)
T ss_dssp             HHHHHTCSSGGGSCCHH---HHHHH
T ss_pred             HHHHHCCCCHHHCCCHH---HHHHH
T ss_conf             99997688976893999---99999


No 62 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=0  Score=316.93  Aligned_cols=253  Identities=16%  Similarity=0.256  Sum_probs=196.6

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCC----------CCCCCCEEE
Q ss_conf             6780899884678948999999949993999999402011020249999999833311898----------662142028
Q 001412          768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSP----------SACVPQILC  837 (1082)
Q Consensus       768 ~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~----------~~~I~~l~~  837 (1082)
                      -.+|++++.||+|+||+||+|+++.+++.||+|++.+...    ....+.+|+.+++.+.|          +++|++++.
T Consensus        12 ~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~----~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~   87 (362)
T d1q8ya_          12 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV----YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD   87 (362)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH----HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred             CCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCC----CHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEE
T ss_conf             7857998997507781899999999997999999834313----368999999999984014555554227676478998


Q ss_pred             EEEE--CCEEEEEEECCCCCCHHHHH-C----CCCCHHHHHHHHHHHHHHHHHHHH-CCCEECCCCCCCEEECCCCC---
Q ss_conf             9841--89189999125888977874-2----999999999999999999999998-79784556999599757995---
Q 001412          838 TCAD--SMHAGLLLNTYLACPLASIL-H----TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGH---  906 (1082)
Q Consensus       838 ~~~~--~~~~~lv~E~~~g~~L~~~l-~----~~l~~~~~~~i~~qi~~aL~~LH~-~givHrDLkp~NIlid~~g~---  906 (1082)
                      ++..  ....+++++++......... .    ..+++..++.++.||+.||.|||+ .||+||||||+|||++.++.   
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~  167 (362)
T d1q8ya_          88 HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPEN  167 (362)
T ss_dssp             EEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTT
T ss_pred             EEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCC
T ss_conf             76312565202343200035420000012234678689999999999999888764058646567705705630576564


Q ss_pred             ---EEEEECCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC----HHHHHHH
Q ss_conf             ---999952787447999730375226888902343799898442111237786543699999999999----7999999
Q 001412          907 ---LQLVDFRFGKGLSGNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRES----EIDIVAK  979 (1082)
Q Consensus       907 ---vkL~DFg~a~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----~~~~~~~  979 (1082)
                         ++++|||.+..... .....+||+.|+|||++.+..++.++|+||+|+++++|++|+.||......    .......
T Consensus       168 ~~~~kl~dfg~s~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~  246 (362)
T d1q8ya_         168 LIQIKIADLGNACWYDE-HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ  246 (362)
T ss_dssp             EEEEEECCCTTCEETTB-CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred             CCEEEEEECCCCCCCCC-CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             43056753144212344-54223665210571321466777643201237899999878899898755432102689999


Q ss_pred             HHH------------------------------------------CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHH
Q ss_conf             850------------------------------------------89999999998899999983136923339999935
Q 001412          980 IAK------------------------------------------GQLSLPQNLSPEAVDLLTKLLVVDENTRLGSQGPT 1017 (1082)
Q Consensus       980 i~~------------------------------------------~~~~~p~~~s~~~~~li~~lL~~dp~~R~s~~~~~ 1017 (1082)
                      +..                                          ....++...++++.+||.+||..||.+|||+.   
T Consensus       247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~---  323 (362)
T d1q8ya_         247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG---  323 (362)
T ss_dssp             HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH---
T ss_pred             HHHHHCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHH---
T ss_conf             99983799878862453220001320122024323577644421000156743589999999998779945790899---


Q ss_pred             HHHCCCCCCCC
Q ss_conf             77619997789
Q 001412         1018 SVKTHPWFRDV 1028 (1082)
Q Consensus      1018 eil~hp~f~~~ 1028 (1082)
                      |+|+||||++.
T Consensus       324 e~L~Hp~f~~~  334 (362)
T d1q8ya_         324 GLVNHPWLKDT  334 (362)
T ss_dssp             HHHTCGGGTTC
T ss_pred             HHHCCCCCCCC
T ss_conf             99669340789


No 63 
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=0  Score=301.86  Aligned_cols=229  Identities=20%  Similarity=0.292  Sum_probs=184.1

Q ss_pred             EEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHC--CCCCHHHHHH
Q ss_conf             38999984153479999998754288626888989846999942899270899999999999999833--7960469999
Q 001412           94 ELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRN--NKFHEDAVDA  171 (1082)
Q Consensus        94 ~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~f~V~DGhG~~G~~aa~~~~~~l~~~l~~~--~~~~~~~~~~  171 (1082)
                      -++|++.|++|.    .|+.|||++++..        .+|+||||||  |+.++++|++.+...+.+.  .....++.+.
T Consensus         2 ~~~~~~~s~~G~----~R~~nEDa~~~~~--------~l~~V~DG~G--G~~~g~~as~~~~~~l~~~~~~~~~~~~~~~   67 (235)
T d1txoa_           2 VLRYAARSDRGL----VRANNEDSVYAGA--------RLLALADGMG--GHAAGEVASQLVIAALAHLDDDEPGGDLLAK   67 (235)
T ss_dssp             EEEEEEEEECCS----SCSSCCEEEEECS--------SEEEEEEEEC--TTTHHHHHHHHHHHHHGGGGSSCCCSCHHHH
T ss_pred             EEEEEEECCCCC----CCCCCCCCCCCCC--------CEEEEEECCC--CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf             799998778899----9898879501499--------8899985899--8478999999999999998631675208999


Q ss_pred             HHHHHHHHHHHHHHC---CCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf             999999872977633---28988887418999995998999963765589997429836877099988999953999999
Q 001412          172 CHSSYLTTNSQLHAD---VLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVK  248 (1082)
Q Consensus       172 l~~a~~~~~~~~~~~---~~~~~~~GtTa~~~~i~~~~l~vanvGDSRa~l~~~~~~~~~~~~lt~DH~~~~~~E~~ri~  248 (1082)
                      +.+++.+++..+...   ......+|||++++++.++++|++||||||+|++|++    .+.+||.||++     ..++.
T Consensus        68 l~~~~~~~~~~l~~~~~~~~~~~~~gtt~~~~~~~~~~l~~anvGDSr~~l~r~g----~~~~lt~dH~~-----~~~~~  138 (235)
T d1txoa_          68 LDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDG----ELTQITKDDTF-----VQTLV  138 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETT----EEEECSCCCBH-----HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCEEEEEECCCCCEEEECCC----EEEEECCCCCH-----HHHHH
T ss_conf             9999999999999874015566664035666663044157875077627996187----89994488758-----88766


Q ss_pred             HCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCEE
Q ss_conf             81975974022236779885457888899999993431088647632224457446665683530416999908998899
Q 001412          249 LSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFF  328 (1082)
Q Consensus       249 ~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~tRslGd~~~k~~~v~~~P~v~~~~l~~~d~fl  328 (1082)
                      ..|......                             .........+||++|+.       ..+|++..+++.++| +|
T Consensus       139 ~~g~~~~~~-----------------------------~~~~~~~~~lt~~~g~~-------~~~pdi~~~~l~~~D-~l  181 (235)
T d1txoa_         139 DEGRITPEE-----------------------------AHSHPQRSLIMRALTGH-------EVEPTLTMREARAGD-RY  181 (235)
T ss_dssp             HTTSSCTTG-----------------------------GGGCTTTTCBCCCBSSS-------CCCCEEEEEECCTTC-EE
T ss_pred             HHCCCCHHH-----------------------------HHHCCCCCHHHCCCCCC-------CCCCEEEEEECCCCC-EE
T ss_conf             516632566-----------------------------55165544111013443-------444417888637898-89


Q ss_pred             EEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             998276311246478999987059988999999999999998317999994999999379
Q 001412          329 VLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHING  388 (1082)
Q Consensus       329 iL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~lv~~a~~~~~~~~~~~DniT~ivv~~~~  388 (1082)
                      |||||||||+++++++.+++. ..+++++|+.|+++|+.     +|+.||+|||||++++
T Consensus       182 lL~SDGl~d~l~~~ei~~i~~-~~~~~~~a~~Lv~~A~~-----~gs~DNiTvivv~l~~  235 (235)
T d1txoa_         182 LLCSDGLSDPVSDETILEALQ-IPEVAESAHRLIELALR-----GGGPDNVTVVVADLEH  235 (235)
T ss_dssp             EEECHHHHTTSCHHHHHHHHT-SSSHHHHHHHHHHHHHH-----TTCCSCEEEEEEEEEC
T ss_pred             EECCCCHHCCCCHHHHHHHHH-CCCHHHHHHHHHHHHHH-----CCCCCCEEEEEEEEEC
T ss_conf             982721413789999999985-79999999999999986-----4997878999999769


No 64 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=300.36  Aligned_cols=244  Identities=13%  Similarity=0.124  Sum_probs=188.0

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC----
Q ss_conf             6780899884678948999999949993999999402011020249999999833311898662142028984189----
Q 001412          768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM----  843 (1082)
Q Consensus       768 ~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~----  843 (1082)
                      .++|.+.+.||+|+||.||++++  +++.||+|++.....    .......|+..+..++ |++|+++++++.+..    
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~----~~~~~e~ei~~~~~~~-HpnIv~~~~~~~~~~~~~~   74 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE----RSWFREAEIYQTVMLR-HENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGH----HHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSE
T ss_pred             CCEEEEEEEEEECCCEEEEEEEE--CCEEEEEEEECCCCH----HHHHHHHHHHHHHHCC-CCCCCCEEEEEEECCCCCE
T ss_conf             86899988982078819999999--998999999872004----6799999999996279-9868326889983798604


Q ss_pred             EEEEEEECCCCCCHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHH--------CCCEECCCCCCCEEECCCCCEEEEECCC
Q ss_conf             1899991258889778742-999999999999999999999998--------7978455699959975799599995278
Q 001412          844 HAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHK--------RGVLYRGVSPDVLMLDKSGHLQLVDFRF  914 (1082)
Q Consensus       844 ~~~lv~E~~~g~~L~~~l~-~~l~~~~~~~i~~qi~~aL~~LH~--------~givHrDLkp~NIlid~~g~vkL~DFg~  914 (1082)
                      .+|+||||+.+|+|..+++ ..+++..+..++.+++.||.|+|.        ++|+||||||+|||++.++.+||+|||+
T Consensus        75 ~~~lv~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl  154 (303)
T d1vjya_          75 QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  154 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEECCCCCEEEEECCC
T ss_conf             89999964669898999865899989999999999999999887665204689866153173135786887768876386


Q ss_pred             CCCCCCC------CCEEEEECCCCCCHHHHCCCC------CCCCCCCCCHHHHHHHHCCCCCCCCCCC------------
Q ss_conf             7447999------730375226888902343799------8984421112377865436999999999------------
Q 001412          915 GKGLSGN------RTFTICGMADYLAPEIVQGKG------HGLAADWWALGVLIYFMLQGEMPFGSWR------------  970 (1082)
Q Consensus       915 a~~~~~~------~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwslG~il~elltg~~pf~~~~------------  970 (1082)
                      ++.....      .....+||+.|+|||++.+..      ++.++||||||+++|||+||..||....            
T Consensus       155 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~  234 (303)
T d1vjya_         155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS  234 (303)
T ss_dssp             CEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred             CCCCCCCCCCEECCCCCEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCC
T ss_conf             62346777620013552503547678221056545467776750122015999999962899887663112410122556


Q ss_pred             -CCHHHHHHHHHHCC--CCCCCC-----CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHC
Q ss_conf             -99799999985089--999999-----9988999999831369233399999357761
Q 001412          971 -ESEIDIVAKIAKGQ--LSLPQN-----LSPEAVDLLTKLLVVDENTRLGSQGPTSVKT 1021 (1082)
Q Consensus       971 -~~~~~~~~~i~~~~--~~~p~~-----~s~~~~~li~~lL~~dp~~R~s~~~~~eil~ 1021 (1082)
                       .........+....  +.+|..     ....+.+|+.+||..||.+||++.   ++++
T Consensus       235 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~---ei~~  290 (303)
T d1vjya_         235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTAL---RIKK  290 (303)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHH---HHHH
T ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHH---HHHH
T ss_conf             4309999998750246888776557768999999999997606985895999---9999


No 65 
>d1cx4a1 b.82.3.2 (A:130-265) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.92  E-value=6.1e-24  Score=158.92  Aligned_cols=134  Identities=34%  Similarity=0.577  Sum_probs=121.1

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCC
Q ss_conf             54445999999999999830710028999999999631658994699889925687893899997599999970577742
Q 001412          458 SSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGE  537 (1082)
Q Consensus       458 ~~~~~k~~~~~~~i~~~L~~~~~f~~l~~~~~~~l~~~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~  537 (1082)
                      +..|+|+.++++.+.+.|+++++|++|+++++..|+..++.+.|++|++|+++||+++.+|+|.+|.|+++....++. .
T Consensus         1 ~~~~~kt~~~~~~l~~~l~~~~~F~~l~~~~~~~l~~~~~~~~~~~g~~I~~~G~~~~~~y~I~~G~v~v~~~~~~~~-~   79 (136)
T d1cx4a1           1 RIIHPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVG-R   79 (136)
T ss_dssp             CCCCCCCHHHHHHHHHHHTTCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECEEEEEEEETTEE-E
T ss_pred             CCCCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCEEEEEECCCCEEEECCCCCHHHHHHHHHEEEEEECCCCCE-E
T ss_conf             966269999999999999689835459999999984455999989999999799822145541312267730465441-6


Q ss_pred             CCEEEEEECCCCCCEEECHHHCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHH
Q ss_conf             244754213688890420101069983139998311105642177788755222357899
Q 001412          538 VPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSS  597 (1082)
Q Consensus       538 ~~~~i~~~~l~~G~~FGe~all~~~~r~atv~A~~~~~l~~l~~~~f~~il~~~~~~~~~  597 (1082)
                      ...     .+++|++||+.+++.+.|++++++|.++|.+|.|+++.|.+++.+++...+.
T Consensus        80 ~~~-----~l~~g~~fg~~~l~~~~~~~~s~~a~~~~~~~~i~~~~f~~ll~~~~~~~r~  134 (136)
T d1cx4a1          80 CVG-----NYDNRGSFGELALMYNTPRAATITATSPGALWGLDRVTFRRIIVKNNAKKRK  134 (136)
T ss_dssp             EEE-----EEESSCEECHHHHHHCCCCCSEEEESSCEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred             EEE-----CCCCCCCCCHHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHHH
T ss_conf             521-----0377532032787389960379998778899998599999999869999986


No 66 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.89  E-value=5.3e-24  Score=159.31  Aligned_cols=169  Identities=11%  Similarity=0.028  Sum_probs=118.9

Q ss_pred             EEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHH---------------CCCHHHHHHHHHHHHCCCCCCCCCCCE
Q ss_conf             08998846789489999999499939999994020110---------------202499999998333118986621420
Q 001412          771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK---------------CLGKEVQVLKEKNLMKSVSPSACVPQI  835 (1082)
Q Consensus       771 y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~---------------~~~~~~~~~~E~~il~~l~~~~~I~~l  835 (1082)
                      +.+.+.||+|+||.||+|.+. +++.+|+|++......               .........+|...+.++.+.+ ++..
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-v~~~   79 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLA-VPKV   79 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSS-SCCE
T ss_pred             CHHCCEEEECCCEEEEEEECC-CCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC-CCEE
T ss_conf             022778024856599999979-99999999986044346665565630008889999997789999999816999-1449


Q ss_pred             EEEEEECCEEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCC
Q ss_conf             28984189189999125888977874299999999999999999999999879784556999599757995999952787
Q 001412          836 LCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFG  915 (1082)
Q Consensus       836 ~~~~~~~~~~~lv~E~~~g~~L~~~l~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a  915 (1082)
                      +...    ..+++||++.+..+..     ++...+..++.|++.++.|||++||+||||||+|||++.++ ++|+|||.|
T Consensus        80 ~~~~----~~~lvme~~~~~~~~~-----l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~-~~liDFG~a  149 (191)
T d1zara2          80 YAWE----GNAVLMELIDAKELYR-----VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG-IWIIDFPQS  149 (191)
T ss_dssp             EEEE----TTEEEEECCCCEEGGG-----CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE-EEECCCTTC
T ss_pred             EEEC----CCEEEEEEECCCCCCC-----HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEECCC-EEEEECCCC
T ss_conf             9862----8889999504565420-----01578999999999999998268889836890361142898-999877884


Q ss_pred             CCCCCCCCEEEEECCCCCCHH-----HHCCCCCCCCCCCCCHHHHHH
Q ss_conf             447999730375226888902-----343799898442111237786
Q 001412          916 KGLSGNRTFTICGMADYLAPE-----IVQGKGHGLAADWWALGVLIY  957 (1082)
Q Consensus       916 ~~~~~~~~~~~~gt~~y~aPE-----~~~~~~~~~~~DiwslG~il~  957 (1082)
                      .....+....      |....     ....+.|+..+|+||+.--+.
T Consensus       150 ~~~~~~~~~~------~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~~  190 (191)
T d1zara2         150 VEVGEEGWRE------ILERDVRNIITYFSRTYRTEKDINSAIDRIL  190 (191)
T ss_dssp             EETTSTTHHH------HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred             CCCCCCCCHH------HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf             3089987099------9987799999997578998446899999874


No 67 
>d1ne6a1 b.82.3.2 (A:109-244) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.89  E-value=3.4e-22  Score=148.34  Aligned_cols=129  Identities=36%  Similarity=0.602  Sum_probs=116.4

Q ss_pred             CCCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCC
Q ss_conf             44459999999999998307100289999999996316589946998899256878938999975999999705777422
Q 001412          459 SAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEV  538 (1082)
Q Consensus       459 ~~~~k~~~~~~~i~~~L~~~~~f~~l~~~~~~~l~~~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~  538 (1082)
                      ...+|..+..+.+.++|+++++|++|++.++.+|+..++.+.|++|++|+++||+++.||||.+|.|++.....     .
T Consensus         6 ~~~~~~~~~~~~l~~~l~~~~lF~~l~~~~l~~l~~~~~~~~~~~ge~I~~~gd~~~~~yiI~~G~v~v~~~~~-----~   80 (136)
T d1ne6a1           6 KVIPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVNNE-----W   80 (136)
T ss_dssp             CCCCCCHHHHHHHHHHHHHCGGGTSCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEEEETTE-----E
T ss_pred             CCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHCCEEEEEECCCCEEEECCCCCCEEEEECCCCEEEECCCC-----C
T ss_conf             16999999999999999679705529999999984646999989999999599984112552589541403310-----1


Q ss_pred             CEEEEEECCCCCCEEECHHHCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHH
Q ss_conf             44754213688890420101069983139998311105642177788755222357899
Q 001412          539 PRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSS  597 (1082)
Q Consensus       539 ~~~i~~~~l~~G~~FGe~all~~~~r~atv~A~~~~~l~~l~~~~f~~il~~~~~~~~~  597 (1082)
                      ..     .+++|++|||++++.+.+|++|++|.++|.+|.|++++|..++++++..++.
T Consensus        81 ~~-----~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~~~~f~~ll~~~~~~~r~  134 (136)
T d1ne6a1          81 AT-----SVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKRK  134 (136)
T ss_dssp             EE-----EECTTCEECCHHHHHCCCCCSEEEESSCEEEEEEEHHHHHHHTHHHHHHHHH
T ss_pred             CC-----EECCCCCCCCHHHCCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHHH
T ss_conf             10-----2135563250998299961279999149899999899999998009999996


No 68 
>d1o7fa2 b.82.3.2 (A:13-167) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.88  E-value=9.7e-22  Score=145.61  Aligned_cols=138  Identities=18%  Similarity=0.266  Sum_probs=120.6

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCC
Q ss_conf             24854445999999999999830710028999999999631658994699889925687893899997599999970577
Q 001412          455 VPSSSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEK  534 (1082)
Q Consensus       455 ~~~~~~~~k~~~~~~~i~~~L~~~~~f~~l~~~~~~~l~~~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~  534 (1082)
                      .+....-.|+.++.+.+...|+++++|+.+++..+.+|+..++.+.|++|+.|+++||+++.+|+|.+|.|+++.....+
T Consensus         6 ~L~k~p~~Rt~~~~~~i~~~L~~~~~F~~l~~~~l~~l~~~~~~~~~~~ge~I~~~gd~~~~~y~I~~G~v~v~~~~~~~   85 (155)
T d1o7fa2           6 CLDKRPLERSSEDVDIIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSS   85 (155)
T ss_dssp             HHTSCSTTCCHHHHHHHHHHHTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEECSSSC
T ss_pred             HHCCCHHHCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCEEEEEEECCCHHEEEECCCC
T ss_conf             85689234899999999999959985746999999999973699997999988738980505688850211101201212


Q ss_pred             CCCCCEEEEEECCCCCCEEECHHHCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHH
Q ss_conf             74224475421368889042010106998313999831110564217778875522235789
Q 001412          535 NGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLS  596 (1082)
Q Consensus       535 ~~~~~~~i~~~~l~~G~~FGe~all~~~~r~atv~A~~~~~l~~l~~~~f~~il~~~~~~~~  596 (1082)
                      ++...   ....+++|++||| +++.+.+|++|++|.++|.++.|++++|..++.+++....
T Consensus        86 ~~~~~---~v~~l~~g~~fGe-~~l~~~~~~~tv~a~~~~~l~~i~~~~f~~il~~~~~~~~  143 (155)
T d1o7fa2          86 HQDAV---TICTLGIGTAFGE-SILDNTPRHATIVTRESSELLRIEQEDFKALWEKYRQYMA  143 (155)
T ss_dssp             GGGCE---EEEEECTTCEECG-GGGGTCBCSSEEEESSSEEEEEEEHHHHHHHHHHHGGGTT
T ss_pred             CCCCC---CCCCCCCCCCCHH-HHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHH
T ss_conf             22333---3223445321204-5534997348999879779999819999999987999999


No 69 
>d1cx4a2 b.82.3.2 (A:266-412) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.86  E-value=1e-20  Score=139.49  Aligned_cols=124  Identities=23%  Similarity=0.325  Sum_probs=108.0

Q ss_pred             HHHHHCCHHCCCCCHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCC-CEEEEEECCCCC
Q ss_conf             9998307100289999999996316589946998899256878938999975999999705777422-447542136888
Q 001412          472 ERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEV-PRVLQRYTAEKL  550 (1082)
Q Consensus       472 ~~~L~~~~~f~~l~~~~~~~l~~~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~-~~~i~~~~l~~G  550 (1082)
                      +++|+++|+|++|++.++.+|+.+++.+.|++|++|+++||+++.||+|++|+|+++....++.... ........+++|
T Consensus         1 e~~l~~~p~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~v~~~~~~~~~~~~~~~~~i~~~~~g   80 (147)
T d1cx4a2           1 ESFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQIIAQGDSADSFFIVESGEVRITMKRKGKSDIEENGAVEIARCLRG   80 (147)
T ss_dssp             HHHHHTCGGGTTSCHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEEEEEEEEEEC--------CCEEEEEEECTT
T ss_pred             CHHHHCCHHHCCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCCCCEEEEEECCCC
T ss_conf             93484597150799999999997589999899999994898886028984116899996589743233310356304688


Q ss_pred             CEEECHHHCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHH
Q ss_conf             904201010699831399983111056421777887552223578
Q 001412          551 SSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNL  595 (1082)
Q Consensus       551 ~~FGe~all~~~~r~atv~A~~~~~l~~l~~~~f~~il~~~~~~~  595 (1082)
                      ++|||.+++.+.+|++|++|.++|++|.|++++|..++.+++...
T Consensus        81 ~~fGe~~~~~~~~~~~t~~a~~~~~~~~i~~~~f~~ll~~~~~i~  125 (147)
T d1cx4a2          81 QYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIM  125 (147)
T ss_dssp             CEESCHHHHHTCCCSSEEEEEEEEEEEEEEHHHHHHHCGGGHHHH
T ss_pred             CEEEEHHHCCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHH
T ss_conf             686634434899715799988787999998999999987799999


No 70 
>d1ne6a2 b.82.3.2 (A:245-376) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.86  E-value=9.3e-21  Score=139.68  Aligned_cols=120  Identities=26%  Similarity=0.328  Sum_probs=109.8

Q ss_pred             HHHHHCCHHCCCCCHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCC-CEEEEEECCCCC
Q ss_conf             9998307100289999999996316589946998899256878938999975999999705777422-447542136888
Q 001412          472 ERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEV-PRVLQRYTAEKL  550 (1082)
Q Consensus       472 ~~~L~~~~~f~~l~~~~~~~l~~~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~-~~~i~~~~l~~G  550 (1082)
                      .++|+++++|++|++.++..|++.++.+.|++|++|+++||+++.+|+|.+|+|+++....++.+.+ ..     .+++|
T Consensus         1 ~~~L~~i~~f~~L~~~~~~~l~~~~~~~~~~~g~~I~~~Gd~~~~~yii~~G~v~~~~~~~~~~~~~~~~-----~~~~g   75 (132)
T d1ne6a2           1 EEFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVG-----RLGPS   75 (132)
T ss_dssp             HHHHHTSGGGGGSCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECCEEEEEESSSSCCEEEEE-----EECTT
T ss_pred             CHHHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCHHHHHHHHHHHEEECCCCCCCCCHHHH-----HCCCC
T ss_conf             9459679826379999999999838999989999999869862378888763311201477544201232-----10234


Q ss_pred             CEEECHHHCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHH
Q ss_conf             9042010106998313999831110564217778875522235789
Q 001412          551 SSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLS  596 (1082)
Q Consensus       551 ~~FGe~all~~~~r~atv~A~~~~~l~~l~~~~f~~il~~~~~~~~  596 (1082)
                      ++||+.+++.+.+|++|++|.++|.++.|++++|.+++.+++....
T Consensus        76 ~~fG~~~~~~~~~~~~t~~a~~~~~~~~i~~~~~~~ll~~~p~~~~  121 (132)
T d1ne6a2          76 DYFGEIALLMNRPRAATVVARGPLKCVKLDRPRFERVLGPCSDILK  121 (132)
T ss_dssp             CEECHHHHHHTSSCSSEEEESSCEEEEEEEHHHHHHHTGGGHHHHH
T ss_pred             CEEEEEEECCCCCEEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHH
T ss_conf             2635754048982468999931189999879999999987999999


No 71 
>d1o7fa3 b.82.3.2 (A:322-445) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84  E-value=2.3e-20  Score=137.30  Aligned_cols=121  Identities=23%  Similarity=0.301  Sum_probs=107.1

Q ss_pred             CHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHCCEEEEE-CCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEE
Q ss_conf             99999999999830710028999999999631658994-69988992568789389999759999997057774224475
Q 001412          464 TWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEV-QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVL  542 (1082)
Q Consensus       464 ~~~~~~~i~~~L~~~~~f~~l~~~~~~~l~~~~~~~~~-~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i  542 (1082)
                      |.++.+.+.+.|+++++|++|++..+.+|+.++..+.+ ++|+.|+++||+++.+|+|.+|.|.+...+.    ....  
T Consensus         1 t~~d~~~i~~~L~~~~~F~~l~~~~l~~l~~~~~~~~~~~~ge~I~~~gd~~~~lyii~~G~v~~~~~~~----~~~~--   74 (124)
T d1o7fa3           1 TVDDLEIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGK----GVVC--   74 (124)
T ss_dssp             CHHHHHHHHHHHTTCGGGTTSCHHHHHHHHHHCEEEEECSTTCEEECTTSCCCEEEEEEESEEEEEETTT----EEEE--
T ss_pred             CHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCCEEEECCCCCCEEEEEECCEEEEEEEEE----EECC--
T ss_conf             9789999999984897053699999999984085999828998999799947668999704699997520----0002--


Q ss_pred             EEECCCCCCEEECHHHCCCCCCEEEEEECCC-CEEEEECHHHHHHHHHHHHH
Q ss_conf             4213688890420101069983139998311-10564217778875522235
Q 001412          543 QRYTAEKLSSFGELALMYNKPLQASVRAVTN-GMLWALKREDFRGILMSEFS  593 (1082)
Q Consensus       543 ~~~~l~~G~~FGe~all~~~~r~atv~A~~~-~~l~~l~~~~f~~il~~~~~  593 (1082)
                         .+++|++|||.+++.+.+|++|++|.++ |.+|.|++++|..++.+.+.
T Consensus        75 ---~~~~G~~fGe~~ll~~~~r~~t~~a~~~~~~l~~i~~~~f~~il~~~~~  123 (124)
T d1o7fa3          75 ---TLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEA  123 (124)
T ss_dssp             ---EEETTCEECGGGGTCCSCCSSEEEESSSSEEEEEEEHHHHHHHHHHTTC
T ss_pred             ---CCCCCCCHHHHHHHCCCCEEEEEEEEECCEEEEEECHHHHHHHHHHCCC
T ss_conf             ---2457840056676179960668999937689999869999999866369


No 72 
>d1q3ea_ b.82.3.2 (A:) HCN pacemaker channel {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81  E-value=1.9e-19  Score=131.75  Aligned_cols=121  Identities=21%  Similarity=0.288  Sum_probs=108.0

Q ss_pred             HHHHHHHHHCCHHCCCCCHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECC
Q ss_conf             99999998307100289999999996316589946998899256878938999975999999705777422447542136
Q 001412          468 EAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTA  547 (1082)
Q Consensus       468 ~~~i~~~L~~~~~f~~l~~~~~~~l~~~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l  547 (1082)
                      .+.+...|.++++|++++...+..|+..|..+.|.+|++|+++||+++.+|||.+|.|+++..+.  .   ..     .+
T Consensus        63 ~~~~~~~l~~~~~F~~~~~~~l~~l~~~~~~~~~~~g~~I~~~g~~~~~ly~i~~G~v~v~~~~~--~---~~-----~l  132 (193)
T d1q3ea_          63 NFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGN--K---EM-----KL  132 (193)
T ss_dssp             HHHTHHHHHHCHHHHTSCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEECCEEEEC-CC--C---EE-----EE
T ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEEEEEEEEECCCC--C---EE-----EE
T ss_conf             99999998202477761299999999997887622684310358877500575120577621786--2---14-----65


Q ss_pred             CCCCEEECHHHCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHH
Q ss_conf             888904201010699831399983111056421777887552223578998
Q 001412          548 EKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSL  598 (1082)
Q Consensus       548 ~~G~~FGe~all~~~~r~atv~A~~~~~l~~l~~~~f~~il~~~~~~~~~l  598 (1082)
                      ++|++|||.+++.+.+|++|++|.++|.+|.|++++|..++...|.....+
T Consensus       133 ~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~l~~~~f~~ll~~~p~~~~~~  183 (193)
T d1q3ea_         133 SDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAF  183 (193)
T ss_dssp             CTTCEECHHHHHHCSBCSSEEEESSCEEEEEEEHHHHHHHHHHSGGGHHHH
T ss_pred             CCCEEEEEEECCCCCCCCCCCEECCCEEEEEEEHHHHHHHHHHCHHHHHHH
T ss_conf             065365542024777421242245746999976999999998799999999


No 73 
>d1zyba2 b.82.3.2 (A:1-147) Probable transcription regulator BT4300, N-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=99.81  E-value=4e-19  Score=129.79  Aligned_cols=124  Identities=16%  Similarity=0.102  Sum_probs=110.7

Q ss_pred             HHHHHHHHCCHHCCCCCHHHHHHHHHCC--EEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEEC
Q ss_conf             9999998307100289999999996316--58994699889925687893899997599999970577742244754213
Q 001412          469 AHIERALHDHFLFRKLTDSQCHVLLDCM--QRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYT  546 (1082)
Q Consensus       469 ~~i~~~L~~~~~f~~l~~~~~~~l~~~~--~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~  546 (1082)
                      +.+.+.|.++++|++|+++++..|+..+  ..+.|++|++|+.+||+++.+|+|++|.|+++..+.+|++.....+    
T Consensus         2 ~~~~d~L~~~~lF~~l~~~~~~~ll~~~~~~~~~~~~g~~i~~~g~~~~~iy~i~~G~v~v~~~~~~g~~~~~~~~----   77 (147)
T d1zyba2           2 ETMFDTLLQLPLFQGLCHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQI----   77 (147)
T ss_dssp             HHHHTTGGGSGGGTTCCHHHHHHHHHTSCCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEE----
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEECCCCCCEEEEEECCEEEEEEECCCCCEEEEEEC----
T ss_conf             6699999679060269999999998518608999889989873157763889982113999997489978999974----


Q ss_pred             CCCCCEEECHHHCCCCCC-EEEEEECCCCEEEEECHHHHHHHHHHHHHHHHH
Q ss_conf             688890420101069983-139998311105642177788755222357899
Q 001412          547 AEKLSSFGELALMYNKPL-QASVRAVTNGMLWALKREDFRGILMSEFSNLSS  597 (1082)
Q Consensus       547 l~~G~~FGe~all~~~~r-~atv~A~~~~~l~~l~~~~f~~il~~~~~~~~~  597 (1082)
                       ++|++|||.+++...++ +++++|.++|.++.++++.|..++.+++.....
T Consensus        78 -~~g~~fGe~~~~~~~~~~~~~v~a~~~~~vl~i~~~~~~~~~~~~p~~~~~  128 (147)
T d1zyba2          78 -EAPYLIEPQSLFGMNTNYASSYVAHTEVHTVCISKAFVLSDLFRYDIFRLN  128 (147)
T ss_dssp             -ESSEEECGGGGSSSCCBCSSEEEESSCEEEEEEEHHHHHHTGGGSHHHHHH
T ss_pred             -CCCCEECCCHHHCCCCCCCCEEEECCEEEEEEHHHHHHHHHHHHCHHHHHH
T ss_conf             -899880100221123455330341220333312399999999879999999


No 74 
>d1wgpa_ b.82.3.2 (A:) Probable cyclic nucleotide-gated ion channel 6 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.80  E-value=8.3e-20  Score=133.91  Aligned_cols=115  Identities=14%  Similarity=0.184  Sum_probs=99.0

Q ss_pred             HHHCCHHCCCCCHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEE
Q ss_conf             98307100289999999996316589946998899256878938999975999999705777422447542136888904
Q 001412          474 ALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSF  553 (1082)
Q Consensus       474 ~L~~~~~f~~l~~~~~~~l~~~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l~~G~~F  553 (1082)
                      .|+++++|++|++..+.+|+..++.+.|++|++|+++||+++.||||.+|.|+++....++....    ....+++|++|
T Consensus         7 ~l~~vp~F~~l~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~ly~i~~G~v~~~~~~~~~~~~~----~~~~l~~G~~f   82 (137)
T d1wgpa_           7 GVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFY----NRSLLKEGDFC   82 (137)
T ss_dssp             SCSSCSGGGSCCHHHHHHHHHHCBCCCBCTTEEEECTTSBCSEEEEEEECCCEEECCSSCSSSSS----CEEECCTTCBS
T ss_pred             HHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCEEEHHCCCCEEEEEECCCCCEEE----EEEECCCCCEE
T ss_conf             98779947179999999999855999979999998513355200000137469999649985034----43104478688


Q ss_pred             ECHHHCC---------CCCCEEEEEECCCCEEEEECHHHHHHHHHHHH
Q ss_conf             2010106---------99831399983111056421777887552223
Q 001412          554 GELALMY---------NKPLQASVRAVTNGMLWALKREDFRGILMSEF  592 (1082)
Q Consensus       554 Ge~all~---------~~~r~atv~A~~~~~l~~l~~~~f~~il~~~~  592 (1082)
                      ||++|+.         ..+|++||+|.++|.+|.|++++|..++.+..
T Consensus        83 GE~~ll~~~~~~~~~~~~~r~~tv~a~t~~~l~~L~~~dl~~il~~~~  130 (137)
T d1wgpa_          83 GDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQFR  130 (137)
T ss_dssp             STHHHHHHHCSSCCSSSCBCSSEEEESSCBEEEEEEHHHHHHHHHHHC
T ss_pred             CCHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEHHHHHHHHHHHC
T ss_conf             362675067876434466667579991637999987999999999822


No 75 
>d1cx4a2 b.82.3.2 (A:266-412) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.79  E-value=2.4e-19  Score=131.18  Aligned_cols=127  Identities=21%  Similarity=0.431  Sum_probs=112.9

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99654243103899999999830231361589979966886794999991099999905532321213544577546678
Q 001412          599 KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDG  678 (1082)
Q Consensus       599 ~~L~~v~~f~~Ls~~~l~~l~~~l~~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~~~~~  678 (1082)
                      .+|+++|+|+.|+..++.+++..++.+.|++|++|+++|+.++.+|+|.+|.|+++.....               ..+.
T Consensus         2 ~~l~~~p~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~v~~~~~~---------------~~~~   66 (147)
T d1cx4a2           2 SFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQIIAQGDSADSFFIVESGEVRITMKRKG---------------KSDI   66 (147)
T ss_dssp             HHHHTCGGGTTSCHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEEEEEEEEEEC---------------------
T ss_pred             HHHHCCHHHCCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCEEEEEECCEEEEEEECCC---------------CCCC
T ss_conf             3484597150799999999997589999899999994898886028984116899996589---------------7432


Q ss_pred             CCCCCCEEEEECCCCCCCCEECCCCCCCCCEEEECCCEEEEEECHHHHHCCCCCCCCCCCCC
Q ss_conf             77664216890687600100012348653259840670585402253310257754544566
Q 001412          679 TQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDD  740 (1082)
Q Consensus       679 ~~~~~~~i~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~l~~~~f~~l~g~l~~i~~~~  740 (1082)
                      ..+....+..+++|++|||.+++.+.+++++++|.+++.++.|++++|..++.+.++++.+.
T Consensus        67 ~~~~~~~i~~~~~g~~fGe~~~~~~~~~~~t~~a~~~~~~~~i~~~~f~~ll~~~~~i~~~~  128 (147)
T d1cx4a2          67 EENGAVEIARCLRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRN  128 (147)
T ss_dssp             --CCEEEEEEECTTCEESCHHHHHTCCCSSEEEEEEEEEEEEEEHHHHHHHCGGGHHHHHHH
T ss_pred             CCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHHHH
T ss_conf             33310356304688686634434899715799988787999998999999987799999999


No 76 
>d1vp6a_ b.82.3.2 (A:) Putative ion channel CnbD {Mesorhizobium loti [TaxId: 381]}
Probab=99.79  E-value=6.2e-19  Score=128.66  Aligned_cols=116  Identities=24%  Similarity=0.291  Sum_probs=105.5

Q ss_pred             HHHHHHCCHHCCCCCHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCC
Q ss_conf             99998307100289999999996316589946998899256878938999975999999705777422447542136888
Q 001412          471 IERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKL  550 (1082)
Q Consensus       471 i~~~L~~~~~f~~l~~~~~~~l~~~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l~~G  550 (1082)
                      ..+.|+++|+|+.++++++..|+..++.+.|++|++|+++|++++.+|+|.+|.|+++..+.       ..     +++|
T Consensus         9 ~~~~l~~~p~F~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~I~~G~v~v~~~~~-------~~-----l~~G   76 (133)
T d1vp6a_           9 NWQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNP-------VE-----LGPG   76 (133)
T ss_dssp             HHHHHTTCGGGGGCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEECSSSC-------EE-----ECTT
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCCCEEEECCCCEEEEEEE-------EE-----ECCC
T ss_conf             99999789752469999999999738899989999999399987653443035527999642-------13-----4157


Q ss_pred             CEEECHHHCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHH
Q ss_conf             904201010699831399983111056421777887552223578998
Q 001412          551 SSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSL  598 (1082)
Q Consensus       551 ~~FGe~all~~~~r~atv~A~~~~~l~~l~~~~f~~il~~~~~~~~~l  598 (1082)
                      ++|||.+++.+.++.++++|.++|.+|.|++++|..++.+++.....+
T Consensus        77 ~~~G~~~~l~~~~~~~~~~a~~~~~i~~i~~~~~~~l~~~~p~~~~~~  124 (133)
T d1vp6a_          77 AFFGEMALISGEPRSATVSAATTVSLLSLHSADFQMLCSSSPEIAEIF  124 (133)
T ss_dssp             CEECHHHHHHCCCCSSCEEESSSEEEEEEEHHHHHHHHHHCHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCEEEECCCEEEEEEEHHHHHHHHHHCHHHHHHH
T ss_conf             532222146998514669989877999986999999997099999999


No 77 
>d1ne6a2 b.82.3.2 (A:245-376) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.78  E-value=6.8e-19  Score=128.40  Aligned_cols=122  Identities=27%  Similarity=0.400  Sum_probs=111.8

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99654243103899999999830231361589979966886794999991099999905532321213544577546678
Q 001412          599 KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDG  678 (1082)
Q Consensus       599 ~~L~~v~~f~~Ls~~~l~~l~~~l~~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~~~~~  678 (1082)
                      ++|+++|+|+.|+..++..++..++...|++|++|+++|+.++.+|||.+|.|+++....                    
T Consensus         2 ~~L~~i~~f~~L~~~~~~~l~~~~~~~~~~~g~~I~~~Gd~~~~~yii~~G~v~~~~~~~--------------------   61 (132)
T d1ne6a2           2 EFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRS--------------------   61 (132)
T ss_dssp             HHHHTSGGGGGSCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECCEEEEEESS--------------------
T ss_pred             HHHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCHHHHHHHHHHHEEECCCC--------------------
T ss_conf             459679826379999999999838999989999999869862378888763311201477--------------------


Q ss_pred             CCCCC-CEEEEECCCCCCCCEECCCCCCCCCEEEECCCEEEEEECHHHHHCCCCCCCCCCCCCC
Q ss_conf             77664-2168906876001000123486532598406705854022533102577545445665
Q 001412          679 TQSSK-ELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQ  741 (1082)
Q Consensus       679 ~~~~~-~~i~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~l~~~~f~~l~g~l~~i~~~~~  741 (1082)
                       .+.+ ..+..+++|++||+.+++.+.+++++++|.+++.++.|++++|..++...++++.+..
T Consensus        62 -~~~~~~~~~~~~~g~~fG~~~~~~~~~~~~t~~a~~~~~~~~i~~~~~~~ll~~~p~~~~~~i  124 (132)
T d1ne6a2          62 -ENEEFVEVGRLGPSDYFGEIALLMNRPRAATVVARGPLKCVKLDRPRFERVLGPCSDILKRNI  124 (132)
T ss_dssp             -SSCCEEEEEEECTTCEECHHHHHHTSSCSSEEEESSCEEEEEEEHHHHHHHTGGGHHHHHHGG
T ss_pred             -CCCCCHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHHHHH
T ss_conf             -544201232102342635754048982468999931189999879999999987999999999


No 78 
>d1ne6a1 b.82.3.2 (A:109-244) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.77  E-value=1e-18  Score=127.33  Aligned_cols=111  Identities=23%  Similarity=0.319  Sum_probs=103.0

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf             89965424310389999999983023136158997996688679499999109999990553232121354457754667
Q 001412          598 LKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDD  677 (1082)
Q Consensus       598 l~~L~~v~~f~~Ls~~~l~~l~~~l~~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~~~~  677 (1082)
                      .+.++++++|+.|++.++..++..+....|++|++|+++|+.++.+|||.+|.|++.....                   
T Consensus        19 ~~~l~~~~lF~~l~~~~l~~l~~~~~~~~~~~ge~I~~~gd~~~~~yiI~~G~v~v~~~~~-------------------   79 (136)
T d1ne6a1          19 AKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVNNE-------------------   79 (136)
T ss_dssp             HHHHHHCGGGTSCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEEEETTE-------------------
T ss_pred             HHHHHCCHHHHHCCHHHHHHHHCCEEEEEECCCCEEEECCCCCCEEEEECCCCEEEECCCC-------------------
T ss_conf             9999679705529999999984646999989999999599984112552589541403310-------------------


Q ss_pred             CCCCCCCEEEEECCCCCCCCEECCCCCCCCCEEEECCCEEEEEECHHHHHCCCCCCC
Q ss_conf             877664216890687600100012348653259840670585402253310257754
Q 001412          678 GTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLT  734 (1082)
Q Consensus       678 ~~~~~~~~i~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~l~~~~f~~l~g~l~  734 (1082)
                             .+.++++|++|||++++.+.+++++++|.+++.++.|++++|..++....
T Consensus        80 -------~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~~~~f~~ll~~~~  129 (136)
T d1ne6a1          80 -------WATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILMGST  129 (136)
T ss_dssp             -------EEEEECTTCEECCHHHHHCCCCCSEEEESSCEEEEEEEHHHHHHHTHHHH
T ss_pred             -------CCCEECCCCCCCCHHHCCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCH
T ss_conf             -------11021355632509982999612799991498999998999999980099


No 79 
>d2gaua2 b.82.3.2 (A:10-151) Transcriptional regulator PG0396, N-terminal domain {Porphyromonas gingivalis [TaxId: 837]}
Probab=99.77  E-value=2.3e-18  Score=125.16  Aligned_cols=114  Identities=14%  Similarity=0.181  Sum_probs=107.2

Q ss_pred             HHCCCCCHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEECHHH
Q ss_conf             10028999999999631658994699889925687893899997599999970577742244754213688890420101
Q 001412          479 FLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELAL  558 (1082)
Q Consensus       479 ~~f~~l~~~~~~~l~~~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l~~G~~FGe~al  558 (1082)
                      ++|+.|+++++..+...++.+.|++|++|+.+|++++.+|+|.+|.|+++..+++|++.+...+     ++|++||+.++
T Consensus         7 elf~~l~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~ly~v~~G~v~~~~~~~~g~~~~~~~~-----~~G~~~G~~~~   81 (142)
T d2gaua2           7 DVWSLLNEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIV-----KPGQFFGMRPY   81 (142)
T ss_dssp             HHHTTCCHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEE-----CTTCEESHHHH
T ss_pred             HHHCCCCHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEECCEEEEEECCCCCEEEEECC-----CCCCHHHHHHH
T ss_conf             9980699999999986199999999999990888155579998523056740455420223213-----54210124554


Q ss_pred             CCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHH
Q ss_conf             069983139998311105642177788755222357899
Q 001412          559 MYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSS  597 (1082)
Q Consensus       559 l~~~~r~atv~A~~~~~l~~l~~~~f~~il~~~~~~~~~  597 (1082)
                      +.+.|+.++++|.++|.++.|+++.|.+++.+++.....
T Consensus        82 ~~~~~~~~~~~a~~~s~v~~i~~~~~~~l~~~~~~~~~~  120 (142)
T d2gaua2          82 FAEETCSSTAIAVENSKVLAIPVEAIEALLKGNTSFCRY  120 (142)
T ss_dssp             HHTSCCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHH
T ss_pred             HCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHHH
T ss_conf             226772359996688799998599999999879899999


No 80 
>d1cx4a1 b.82.3.2 (A:130-265) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.77  E-value=2.8e-18  Score=124.70  Aligned_cols=115  Identities=18%  Similarity=0.230  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             99899654243103899999999830231361589979966886794999991099999905532321213544577546
Q 001412          596 SSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVE  675 (1082)
Q Consensus       596 ~~l~~L~~v~~f~~Ls~~~l~~l~~~l~~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~~  675 (1082)
                      ...++|+.+++|+.|++.++..++..+....|++|++|+++|+.++.+|+|.+|.|+++...+                 
T Consensus        13 ~l~~~l~~~~~F~~l~~~~~~~l~~~~~~~~~~~g~~I~~~G~~~~~~y~I~~G~v~v~~~~~-----------------   75 (136)
T d1cx4a1          13 RLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCD-----------------   75 (136)
T ss_dssp             HHHHHHTTCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECEEEEEEEET-----------------
T ss_pred             HHHHHHHCCHHHHCCCHHHHHHHHCCEEEEEECCCCEEEECCCCCHHHHHHHHHEEEEEECCC-----------------
T ss_conf             999999689835459999999984455999989999999799822145541312267730465-----------------


Q ss_pred             CCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCEEEECCCEEEEEECHHHHHCCCCC
Q ss_conf             678776642168906876001000123486532598406705854022533102577
Q 001412          676 DDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGP  732 (1082)
Q Consensus       676 ~~~~~~~~~~i~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~l~~~~f~~l~g~  732 (1082)
                           +....+..+++|++||+++++.+.+++++++|.+++.++.|+++.|..++-.
T Consensus        76 -----~~~~~~~~l~~g~~fg~~~l~~~~~~~~s~~a~~~~~~~~i~~~~f~~ll~~  127 (136)
T d1cx4a1          76 -----GVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGALWGLDRVTFRRIIVK  127 (136)
T ss_dssp             -----TEEEEEEEEESSCEECHHHHHHCCCCCSEEEESSCEEEEEEEHHHHHHHHHH
T ss_pred             -----CCEEEEECCCCCCCCCHHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHH
T ss_conf             -----4416521037753203278738996037999877889999859999999986


No 81 
>d1o7fa2 b.82.3.2 (A:13-167) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76  E-value=3e-18  Score=124.48  Aligned_cols=137  Identities=12%  Similarity=0.117  Sum_probs=116.7

Q ss_pred             HHHHHHHHHHHH------HHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEC
Q ss_conf             887552223578------99899654243103899999999830231361589979966886794999991099999905
Q 001412          584 FRGILMSEFSNL------SSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDA  657 (1082)
Q Consensus       584 f~~il~~~~~~~------~~l~~L~~v~~f~~Ls~~~l~~l~~~l~~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~  657 (1082)
                      +..+|.+.|..+      ....+|+++++|+.++...+.+++..+....|++|+.|+++|+.++++|+|.+|.|.+....
T Consensus         3 ~i~~L~k~p~~Rt~~~~~~i~~~L~~~~~F~~l~~~~l~~l~~~~~~~~~~~ge~I~~~gd~~~~~y~I~~G~v~v~~~~   82 (155)
T d1o7fa2           3 WIACLDKRPLERSSEDVDIIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSE   82 (155)
T ss_dssp             HHHHHTSCSTTCCHHHHHHHHHHHTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEECS
T ss_pred             HHHHHCCCHHHCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCEEEEEEECCCHHEEEEC
T ss_conf             68985689234899999999999959985746999999999973699997999988738980505688850211101201


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCEEEECCCEEEEEECHHHHHCCCCCCCCCC
Q ss_conf             53232121354457754667877664216890687600100012348653259840670585402253310257754544
Q 001412          658 DLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKIS  737 (1082)
Q Consensus       658 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~l~~~~f~~l~g~l~~i~  737 (1082)
                      .                   ...+....+..+++|++||| +++.+.+|+++++|.+++.++.|++++|..++.+.++++
T Consensus        83 ~-------------------~~~~~~~~v~~l~~g~~fGe-~~l~~~~~~~tv~a~~~~~l~~i~~~~f~~il~~~~~~~  142 (155)
T d1o7fa2          83 T-------------------SSHQDAVTICTLGIGTAFGE-SILDNTPRHATIVTRESSELLRIEQEDFKALWEKYRQYM  142 (155)
T ss_dssp             S-------------------SCGGGCEEEEEECTTCEECG-GGGGTCBCSSEEEESSSEEEEEEEHHHHHHHHHHHGGGT
T ss_pred             C-------------------CCCCCCCCCCCCCCCCCCHH-HHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHH
T ss_conf             2-------------------12223333223445321204-553499734899987977999981999999998799999


Q ss_pred             CCC
Q ss_conf             566
Q 001412          738 HDD  740 (1082)
Q Consensus       738 ~~~  740 (1082)
                      ..-
T Consensus       143 ~~l  145 (155)
T d1o7fa2         143 AGL  145 (155)
T ss_dssp             TTT
T ss_pred             HHH
T ss_conf             999


No 82 
>d1o7fa3 b.82.3.2 (A:322-445) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73  E-value=3.4e-17  Score=118.10  Aligned_cols=115  Identities=23%  Similarity=0.294  Sum_probs=101.5

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEE-CCCCEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             99899654243103899999999830231361-58997996688679499999109999990553232121354457754
Q 001412          596 SSLKLLRSVDLLSRLTILQLSHLADTLSEVSF-SAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHV  674 (1082)
Q Consensus       596 ~~l~~L~~v~~f~~Ls~~~l~~l~~~l~~~~~-~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~  674 (1082)
                      .....|+++++|++|+...+.+++..+....| ++|+.|+++|++++.+|||.+|.|.+.....                
T Consensus         7 ~i~~~L~~~~~F~~l~~~~l~~l~~~~~~~~~~~~ge~I~~~gd~~~~lyii~~G~v~~~~~~~----------------   70 (124)
T d1o7fa3           7 IIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGK----------------   70 (124)
T ss_dssp             HHHHHHTTCGGGTTSCHHHHHHHHHHCEEEEECSTTCEEECTTSCCCEEEEEEESEEEEEETTT----------------
T ss_pred             HHHHHHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCCEEEECCCCCCEEEEEECCEEEEEEEEE----------------
T ss_conf             9999984897053699999999984085999828998999799947668999704699997520----------------


Q ss_pred             CCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCEEEECCC-EEEEEECHHHHHCCCCCCCC
Q ss_conf             66787766421689068760010001234865325984067-05854022533102577545
Q 001412          675 EDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDD-VVCAILTKEKFDLVVGPLTK  735 (1082)
Q Consensus       675 ~~~~~~~~~~~i~~l~~G~~FGe~all~~~~r~~tv~a~~~-~~~~~l~~~~f~~l~g~l~~  735 (1082)
                               ..+..+++|++|||.+++.+.+|++|++|.++ |.++.|++++|..++.+.++
T Consensus        71 ---------~~~~~~~~G~~fGe~~ll~~~~r~~t~~a~~~~~~l~~i~~~~f~~il~~~~~  123 (124)
T d1o7fa3          71 ---------GVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEA  123 (124)
T ss_dssp             ---------EEEEEEETTCEECGGGGTCCSCCSSEEEESSSSEEEEEEEHHHHHHHHHHTTC
T ss_pred             ---------EECCCCCCCCCHHHHHHHCCCCEEEEEEEEECCEEEEEECHHHHHHHHHHCCC
T ss_conf             ---------00022457840056676179960668999937689999869999999866369


No 83 
>d1wgpa_ b.82.3.2 (A:) Probable cyclic nucleotide-gated ion channel 6 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.73  E-value=3.6e-18  Score=124.04  Aligned_cols=115  Identities=18%  Similarity=0.215  Sum_probs=100.6

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99654243103899999999830231361589979966886794999991099999905532321213544577546678
Q 001412          599 KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDG  678 (1082)
Q Consensus       599 ~~L~~v~~f~~Ls~~~l~~l~~~l~~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~~~~~  678 (1082)
                      ..|+++|+|+.|++..+.+++..++.+.|++|++|+++|++++.+|||.+|.|++....+                    
T Consensus         6 s~l~~vp~F~~l~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~ly~i~~G~v~~~~~~~--------------------   65 (137)
T d1wgpa_           6 SGVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDG--------------------   65 (137)
T ss_dssp             CSCSSCSGGGSCCHHHHHHHHHHCBCCCBCTTEEEECTTSBCSEEEEEEECCCEEECCSS--------------------
T ss_pred             HHHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCEEEHHCCCCEEEEEECC--------------------
T ss_conf             898779947179999999999855999979999998513355200000137469999649--------------------


Q ss_pred             CCCCCCEEEEECCCCCCCCEECCC---------CCCCCCEEEECCCEEEEEECHHHHHCCCCCC
Q ss_conf             776642168906876001000123---------4865325984067058540225331025775
Q 001412          679 TQSSKELSVEKSEGSYFGEWTLLG---------EHMGSLTAVAVDDVVCAILTKEKFDLVVGPL  733 (1082)
Q Consensus       679 ~~~~~~~i~~l~~G~~FGe~all~---------~~~r~~tv~a~~~~~~~~l~~~~f~~l~g~l  733 (1082)
                      .......+..+++|++|||++|+.         ..+|++||+|+++|.++.|.+++|..++.+.
T Consensus        66 ~~~~~~~~~~l~~G~~fGE~~ll~~~~~~~~~~~~~r~~tv~a~t~~~l~~L~~~dl~~il~~~  129 (137)
T d1wgpa_          66 GRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQF  129 (137)
T ss_dssp             CSSSSSCEEECCTTCBSSTHHHHHHHCSSCCSSSCBCSSEEEESSCBEEEEEEHHHHHHHHHHH
T ss_pred             CCCEEEEEEECCCCCEECCHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEHHHHHHHHHHH
T ss_conf             9850344310447868836267506787643446666757999163799998799999999982


No 84 
>d1i5za2 b.82.3.2 (A:6-137) Catabolite gene activator protein, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.71  E-value=1.1e-16  Score=115.14  Aligned_cols=109  Identities=22%  Similarity=0.274  Sum_probs=98.4

Q ss_pred             CHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEECHHHCCC-CC
Q ss_conf             99999999631658994699889925687893899997599999970577742244754213688890420101069-98
Q 001412          485 TDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYN-KP  563 (1082)
Q Consensus       485 ~~~~~~~l~~~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l~~G~~FGe~all~~-~~  563 (1082)
                      ++++++.++..++.+.|++|++|+++||+.+.+|+|++|.|+++..+.+|++.....+     .+|++||+.+++.+ .+
T Consensus         2 sd~~le~l~~~~~~~~~~~g~~i~~~g~~~~~iy~i~~G~v~~~~~~~~g~e~~l~~~-----~~G~~~G~~~~~~~~~~   76 (132)
T d1i5za2           2 TDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYL-----NQGDFIGELGLFEEGQE   76 (132)
T ss_dssp             CCHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEECCEEEEEECTTCCEEEEEEE-----CTTCEESCTTTTSSSCB
T ss_pred             CHHHHHHHHHHCEEEEECCCCEEECCCCCCCEEEEEEECCCEEEECCCCCHHHHHHHH-----CCCCCCCHHHHHCCCCC
T ss_conf             8799999997089999994899981889788799999733216522442125566550-----75342115999648766


Q ss_pred             CEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHH
Q ss_conf             31399983111056421777887552223578998
Q 001412          564 LQASVRAVTNGMLWALKREDFRGILMSEFSNLSSL  598 (1082)
Q Consensus       564 r~atv~A~~~~~l~~l~~~~f~~il~~~~~~~~~l  598 (1082)
                      +.++++|.++|.++.++++.|.+++.+++.....+
T Consensus        77 ~~~~~~a~~~~~v~~i~~~~~~~~~~~~~~~~~~~  111 (132)
T d1i5za2          77 RSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRL  111 (132)
T ss_dssp             CCSEEEESSCEEEEEEEHHHHHHHHHHCTHHHHHH
T ss_pred             CEEEEEECCCEEEEEECHHHHHHHHHHCHHHHHHH
T ss_conf             61899991453899983999999986699999999


No 85 
>d2oz6a2 b.82.3.2 (A:9-142) Cyclic AMP receptor-like protein Vfr {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.70  E-value=1.9e-16  Score=113.57  Aligned_cols=107  Identities=18%  Similarity=0.230  Sum_probs=96.4

Q ss_pred             HHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEECHHHCCC----
Q ss_conf             9999999631658994699889925687893899997599999970577742244754213688890420101069----
Q 001412          486 DSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYN----  561 (1082)
Q Consensus       486 ~~~~~~l~~~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l~~G~~FGe~all~~----  561 (1082)
                      -+++++|+..++.+.|++|++|+++||+.+.+|+|++|.|+++..+.+|++.+...+     ++|++|||++++.+    
T Consensus         2 ~~~le~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~-----~~g~~~G~~~~~~~~~~~   76 (134)
T d2oz6a2           2 LKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYL-----NSGDFFGELGLFEKEGSE   76 (134)
T ss_dssp             HHHHHHHHHSSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEE-----ETTCEESCTTTCC-----
T ss_pred             HHHHHHHHHHCEEEEECCCCEEEECCCCCCEEEEEEECCCCEEEEECCCCCCEEEEC-----CCCCCCCHHHHHCCCCCC
T ss_conf             689999997089999898999994998177899999853215664012332101341-----589834518772576545


Q ss_pred             CCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHH
Q ss_conf             983139998311105642177788755222357899
Q 001412          562 KPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSS  597 (1082)
Q Consensus       562 ~~r~atv~A~~~~~l~~l~~~~f~~il~~~~~~~~~  597 (1082)
                      .+++++++|.++|.++.++++.|..++..++.....
T Consensus        77 ~~~~~~~~a~~~~~vl~i~~~~~~~~~~~~~~~~~~  112 (134)
T d2oz6a2          77 QERSAWVRAKVECEVAEISYAKFRELSQQDSEILYT  112 (134)
T ss_dssp             CBCCSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHH
T ss_pred             CCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHHH
T ss_conf             422049998888899998299999999889899999


No 86 
>d1q3ea_ b.82.3.2 (A:) HCN pacemaker channel {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69  E-value=6.4e-17  Score=116.45  Aligned_cols=116  Identities=22%  Similarity=0.277  Sum_probs=104.3

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             98996542431038999999998302313615899799668867949999910999999055323212135445775466
Q 001412          597 SLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVED  676 (1082)
Q Consensus       597 ~l~~L~~v~~f~~Ls~~~l~~l~~~l~~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~~~  676 (1082)
                      ...+|+++|+|+.++...+..++..+....|.+|++|+++|+.++.+|||.+|.|.+.....                  
T Consensus        66 ~~~~l~~~~~F~~~~~~~l~~l~~~~~~~~~~~g~~I~~~g~~~~~ly~i~~G~v~v~~~~~------------------  127 (193)
T d1q3ea_          66 CRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGN------------------  127 (193)
T ss_dssp             THHHHHHCHHHHTSCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEECCEEEEC-CC------------------
T ss_pred             HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEEEEEEEEECCCC------------------
T ss_conf             99998202477761299999999997887622684310358877500575120577621786------------------


Q ss_pred             CCCCCCCCEEEEECCCCCCCCEECCCCCCCCCEEEECCCEEEEEECHHHHHCCCCCCCCCCC
Q ss_conf             78776642168906876001000123486532598406705854022533102577545445
Q 001412          677 DGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH  738 (1082)
Q Consensus       677 ~~~~~~~~~i~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~l~~~~f~~l~g~l~~i~~  738 (1082)
                              .+..+++|++|||.+++.+.+++++++|.++|.++.|++++|..++...+++..
T Consensus       128 --------~~~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~l~~~~f~~ll~~~p~~~~  181 (193)
T d1q3ea_         128 --------KEMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRR  181 (193)
T ss_dssp             --------CEEEECTTCEECHHHHHHCSBCSSEEEESSCEEEEEEEHHHHHHHHHHSGGGHH
T ss_pred             --------CEEEECCCEEEEEEECCCCCCCCCCCEECCCEEEEEEEHHHHHHHHHHCHHHHH
T ss_conf             --------214650653655420247774212422457469999769999999987999999


No 87 
>d1vp6a_ b.82.3.2 (A:) Putative ion channel CnbD {Mesorhizobium loti [TaxId: 381]}
Probab=99.69  E-value=3.8e-17  Score=117.86  Aligned_cols=115  Identities=23%  Similarity=0.368  Sum_probs=103.8

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             89989965424310389999999983023136158997996688679499999109999990553232121354457754
Q 001412          595 LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHV  674 (1082)
Q Consensus       595 ~~~l~~L~~v~~f~~Ls~~~l~~l~~~l~~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~  674 (1082)
                      ...+++|+++|+|+.++..++..++..+..+.|++|++|+++|++++.+|+|.+|.|+++....                
T Consensus         7 ~~~~~~l~~~p~F~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~I~~G~v~v~~~~~----------------   70 (133)
T d1vp6a_           7 VRNWQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNP----------------   70 (133)
T ss_dssp             HHHHHHHTTCGGGGGCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEECSSSC----------------
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCCCEEEECCCCEEEEEEE----------------
T ss_conf             8899999789752469999999999738899989999999399987653443035527999642----------------


Q ss_pred             CCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCEEEECCCEEEEEECHHHHHCCCCCCCCCC
Q ss_conf             667877664216890687600100012348653259840670585402253310257754544
Q 001412          675 EDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKIS  737 (1082)
Q Consensus       675 ~~~~~~~~~~~i~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~l~~~~f~~l~g~l~~i~  737 (1082)
                                  .++++|++|||.+++.+.++.++++|.+++.++.|++++|..++...+.+.
T Consensus        71 ------------~~l~~G~~~G~~~~l~~~~~~~~~~a~~~~~i~~i~~~~~~~l~~~~p~~~  121 (133)
T d1vp6a_          71 ------------VELGPGAFFGEMALISGEPRSATVSAATTVSLLSLHSADFQMLCSSSPEIA  121 (133)
T ss_dssp             ------------EEECTTCEECHHHHHHCCCCSSCEEESSSEEEEEEEHHHHHHHHHHCHHHH
T ss_pred             ------------EEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEHHHHHHHHHHCHHHH
T ss_conf             ------------134157532222146998514669989877999986999999997099999


No 88 
>d1zyba2 b.82.3.2 (A:1-147) Probable transcription regulator BT4300, N-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=99.68  E-value=2.2e-16  Score=113.20  Aligned_cols=120  Identities=15%  Similarity=0.173  Sum_probs=106.8

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHCC--EEEECCCCEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             89965424310389999999983023--1361589979966886794999991099999905532321213544577546
Q 001412          598 LKLLRSVDLLSRLTILQLSHLADTLS--EVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVE  675 (1082)
Q Consensus       598 l~~L~~v~~f~~Ls~~~l~~l~~~l~--~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~~  675 (1082)
                      ...|+++|+|+.|+..++..++..+.  .+.|++|++|+.+|++.+.+|+|.+|.|++.....                 
T Consensus         5 ~d~L~~~~lF~~l~~~~~~~ll~~~~~~~~~~~~g~~i~~~g~~~~~iy~i~~G~v~v~~~~~-----------------   67 (147)
T d1zyba2           5 FDTLLQLPLFQGLCHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAK-----------------   67 (147)
T ss_dssp             HTTGGGSGGGTTCCHHHHHHHHHTSCCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECG-----------------
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEECCCCCCEEEEEECCEEEEEEECC-----------------
T ss_conf             999967906026999999999851860899988998987315776388998211399999748-----------------


Q ss_pred             CCCCCCCCCEEEEECCCCCCCCEECCCCCCC-CCEEEECCCEEEEEECHHHHHCCCCCCCCCCC
Q ss_conf             6787766421689068760010001234865-32598406705854022533102577545445
Q 001412          676 DDGTQSSKELSVEKSEGSYFGEWTLLGEHMG-SLTAVAVDDVVCAILTKEKFDLVVGPLTKISH  738 (1082)
Q Consensus       676 ~~~~~~~~~~i~~l~~G~~FGe~all~~~~r-~~tv~a~~~~~~~~l~~~~f~~l~g~l~~i~~  738 (1082)
                          .+++..+..+++|++|||.+++...++ +++++|.+++.++.+++..|..++...+.+..
T Consensus        68 ----~g~~~~~~~~~~g~~fGe~~~~~~~~~~~~~v~a~~~~~vl~i~~~~~~~~~~~~p~~~~  127 (147)
T d1zyba2          68 ----ENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAHTEVHTVCISKAFVLSDLFRYDIFRL  127 (147)
T ss_dssp             ----GGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEESSCEEEEEEEHHHHHHTGGGSHHHHH
T ss_pred             ----CCCEEEEEECCCCCEECCCHHHCCCCCCCCEEEECCEEEEEEHHHHHHHHHHHHCHHHHH
T ss_conf             ----997899997489988010022112345533034122033331239999999987999999


No 89 
>d3e5ua2 b.82.3.2 (A:9-147) Chlorophenol reduction protein CprK {Desulfitobacterium hafniense [TaxId: 49338]}
Probab=99.67  E-value=1.7e-16  Score=113.85  Aligned_cols=113  Identities=10%  Similarity=0.015  Sum_probs=100.6

Q ss_pred             CCHHCCCCCHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEECH
Q ss_conf             07100289999999996316589946998899256878938999975999999705777422447542136888904201
Q 001412          477 DHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGEL  556 (1082)
Q Consensus       477 ~~~~f~~l~~~~~~~l~~~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l~~G~~FGe~  556 (1082)
                      .+..+.-++.+++++++..+..+.|++|++|+.+||+.+.+|+|++|.|+++..+.+|++.+...+     ++|++|||+
T Consensus         5 ~~~p~~~~p~e~l~~l~~~~~~~~y~kg~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~l~~~-----~~g~~~g~~   79 (139)
T d3e5ua2           5 AIIPDNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYA-----GGNSLIGKL   79 (139)
T ss_dssp             CSSSBSCSCCGGGGGGGGGSEEEEECTTCEEECTTCCCCSEEEEEESEEEEEEECTTSCEEEEEEE-----ETTCEECCC
T ss_pred             HCCCCCCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCEEEC-----CCCCEEEHH
T ss_conf             269987899999999997188999889998995799778899999644658886122332101232-----533264021


Q ss_pred             HHCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHH
Q ss_conf             01069983139998311105642177788755222357899
Q 001412          557 ALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSS  597 (1082)
Q Consensus       557 all~~~~r~atv~A~~~~~l~~l~~~~f~~il~~~~~~~~~  597 (1082)
                      .   ..+++++++|.++|+++.++++.|..++.+++.....
T Consensus        80 ~---~~~~~~~~~a~~~~~v~~i~~~~f~~l~~~~p~l~~~  117 (139)
T d3e5ua2          80 Y---PTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFE  117 (139)
T ss_dssp             S---CCSCEEEEEESSCEEEEEECHHHHHHHHHHCTHHHHH
T ss_pred             H---HHCCCCCCCCCCCCEEEEEEHHHHHHHHHCCHHHHHH
T ss_conf             2---3022100000242367896089999988309999999


No 90 
>d1o5la1 b.82.3.2 (A:1-129) CRP-like transcriptional regulator TM1171, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.65  E-value=4.5e-16  Score=111.35  Aligned_cols=105  Identities=17%  Similarity=0.203  Sum_probs=94.7

Q ss_pred             HHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEECHHHCCCCCC-EE
Q ss_conf             99999631658994699889925687893899997599999970577742244754213688890420101069983-13
Q 001412          488 QCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPL-QA  566 (1082)
Q Consensus       488 ~~~~l~~~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l~~G~~FGe~all~~~~r-~a  566 (1082)
                      ++.+|+.+++.+.|++|++|+++||+++++|+|++|.|+++....+|++.....+     ++|++||+.+++.+.++ ++
T Consensus         2 dl~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~-----~~g~~~g~~~~~~~~~~~~~   76 (129)
T d1o5la1           2 DLKKLLPCGKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEI-----KPVQIIASGFIFSSEPRFPV   76 (129)
T ss_dssp             CGGGGGGGSEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEE-----CSSEESSGGGTTSSSCBCSS
T ss_pred             CHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEECCCCEEEEEECCCCCCHHHHC-----CCCCCCCHHHHHCCCCCCCE
T ss_conf             1898974789999999999998898676799996056099996302442022212-----54432214777504888647


Q ss_pred             EEEECCCCEEEEECHHHHHHHHHHHHHHHHH
Q ss_conf             9998311105642177788755222357899
Q 001412          567 SVRAVTNGMLWALKREDFRGILMSEFSNLSS  597 (1082)
Q Consensus       567 tv~A~~~~~l~~l~~~~f~~il~~~~~~~~~  597 (1082)
                      +++|.++|+++.|+++.|..++.+++.....
T Consensus        77 ~~~a~~~~~vl~i~~~~~~~~~~~~~~~~~~  107 (129)
T d1o5la1          77 NVVAGENSKILSIPKEVFLDLLMKDRELLLF  107 (129)
T ss_dssp             EEEESSSEEEEEEEHHHHHHHHHHCHHHHHH
T ss_pred             EEEEECCCEEEEECHHHHHHHHHHCHHHHHH
T ss_conf             9996133389998499999999869999999


No 91 
>d2gaua2 b.82.3.2 (A:10-151) Transcriptional regulator PG0396, N-terminal domain {Porphyromonas gingivalis [TaxId: 837]}
Probab=99.62  E-value=5.8e-16  Score=110.66  Aligned_cols=113  Identities=18%  Similarity=0.228  Sum_probs=104.5

Q ss_pred             HHHCCCCHHHHHHHHHHCCEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             43103899999999830231361589979966886794999991099999905532321213544577546678776642
Q 001412          605 DLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKE  684 (1082)
Q Consensus       605 ~~f~~Ls~~~l~~l~~~l~~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~  684 (1082)
                      ++|+.|++.++..++..+....|++|++|+.+|+..+.+|+|.+|.|+++...+                     .+++.
T Consensus         7 elf~~l~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~ly~v~~G~v~~~~~~~---------------------~g~~~   65 (142)
T d2gaua2           7 DVWSLLNEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGV---------------------YGRFH   65 (142)
T ss_dssp             HHHTTCCHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEESCEEEEC--------------------------CCC
T ss_pred             HHHCCCCHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEECCEEEEEECC---------------------CCCEE
T ss_conf             998069999999998619999999999999088815557999852305674045---------------------54202


Q ss_pred             EEEEECCCCCCCCEECCCCCCCCCEEEECCCEEEEEECHHHHHCCCCCCCCCCC
Q ss_conf             168906876001000123486532598406705854022533102577545445
Q 001412          685 LSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH  738 (1082)
Q Consensus       685 ~i~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~l~~~~f~~l~g~l~~i~~  738 (1082)
                      .+..+++|++||+.+++.+.++.+++.|++++.++.++++.|..++...+.+..
T Consensus        66 ~~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~s~v~~i~~~~~~~l~~~~~~~~~  119 (142)
T d2gaua2          66 ISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKVLAIPVEAIEALLKGNTSFCR  119 (142)
T ss_dssp             EEEEECTTCEESHHHHHHTSCCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHH
T ss_pred             EEECCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHH
T ss_conf             232135421012455422677235999668879999859999999987989999


No 92 
>d1ft9a2 b.82.3.1 (A:2-133) CO-sensing protein CooA, N-terminal domain {Rhodospirillum rubrum [TaxId: 1085]}
Probab=99.60  E-value=8.8e-16  Score=109.57  Aligned_cols=110  Identities=15%  Similarity=0.076  Sum_probs=96.9

Q ss_pred             HCCHHCCCCCHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEC
Q ss_conf             30710028999999999631658994699889925687893899997599999970577742244754213688890420
Q 001412          476 HDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGE  555 (1082)
Q Consensus       476 ~~~~~f~~l~~~~~~~l~~~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l~~G~~FGe  555 (1082)
                      .+.++|..|++++++.+...++.+.|++|++|+.+|++.+.+|+|++|.|+++..++ |++.+...+     ++|++||+
T Consensus         2 ~r~~~~~~L~~~~~~~~~~~~~~~~~~kG~~i~~~g~~~~~ly~v~~G~v~~~~~~~-g~e~~l~~~-----~~g~~f~~   75 (132)
T d1ft9a2           2 PRFNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGE-EREISLFYL-----TSGDMFCM   75 (132)
T ss_dssp             CCCCTHHHHTSTTTTTTTTTCEEEEECTTCEEECTTCCCCCEEEEEESEEEEEEEET-TEEEEEEEE-----ETTCEEES
T ss_pred             CCCCHHHHCCHHHHHHHHHHCEEEEECCCCEEECCCCCCCEEEEEEECEEEEECCCC-CCCEEECCC-----CCCCCCCC
T ss_conf             986765759989999999748789841870788799977789999767585520454-100010001-----22222323


Q ss_pred             HHHCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHH
Q ss_conf             1010699831399983111056421777887552223578998
Q 001412          556 LALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSL  598 (1082)
Q Consensus       556 ~all~~~~r~atv~A~~~~~l~~l~~~~f~~il~~~~~~~~~l  598 (1082)
                      .       ++++++|.++|.++.++++.|.+++.+++.....+
T Consensus        76 ~-------~~~~v~A~~~s~v~~i~~~~~~~ll~~~p~~~~~l  111 (132)
T d1ft9a2          76 H-------SGCLVEATERTEVRFADIRTFEQKLQTCPSMAWGL  111 (132)
T ss_dssp             C-------SSCEEEESSCEEEEEECHHHHHHHHHHCGGGHHHH
T ss_pred             C-------CCCCCEECCCEEEEEEHHHHHHHHHHHHHHHHHHH
T ss_conf             4-------55612321010131001889999999899999999


No 93 
>d2zcwa2 b.82.3.2 (A:6-117) Transcriptional regulator TTHA1359, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=99.57  E-value=6.6e-15  Score=104.25  Aligned_cols=90  Identities=27%  Similarity=0.211  Sum_probs=80.6

Q ss_pred             EEEECCCCEEEECCC--CCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEECHHHCCCCCCEEEEEECCCCE
Q ss_conf             899469988992568--789389999759999997057774224475421368889042010106998313999831110
Q 001412          498 RVEVQAGDIVVKQGG--EGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGM  575 (1082)
Q Consensus       498 ~~~~~~G~~I~~qGd--~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l~~G~~FGe~all~~~~r~atv~A~~~~~  575 (1082)
                      .+.|++|++||.+||  +++.+|+|.+|.|+++..+.+|++.+...+     ++|++|||.+++.+ +++++++|.++|.
T Consensus         2 ~~~~~~ge~i~~~Ge~~~~~~~y~i~~G~v~i~~~~~~G~e~~~~~~-----~~G~~~G~~~l~~~-~~~~~~~A~~~~~   75 (112)
T d2zcwa2           2 TVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLV-----RPGGFFGEEALFGQ-ERIYFAEAATDVR   75 (112)
T ss_dssp             CEEECTTCEEECSBSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEE-----CTTCEECTHHHHTC-CBCSEEEESSCEE
T ss_pred             EEEECCCCEEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCEECCC-----CCCCCCHHHHHCCC-CCEEEEEEEECEE
T ss_conf             58988999999799988777899999866147875012200000010-----12333025777289-8327999920489


Q ss_pred             EEEECHHHHHHHHHHHHH
Q ss_conf             564217778875522235
Q 001412          576 LWALKREDFRGILMSEFS  593 (1082)
Q Consensus       576 l~~l~~~~f~~il~~~~~  593 (1082)
                      ++.|++++|..+++..+.
T Consensus        76 i~~i~~~~~~~l~~~~~~   93 (112)
T d2zcwa2          76 LEPLPENPDPELLKDLAQ   93 (112)
T ss_dssp             EEECCSSCCHHHHHHHHH
T ss_pred             EEEEEHHHHHHHHHHHHH
T ss_conf             999996898999999999


No 94 
>d1i5za2 b.82.3.2 (A:6-137) Catabolite gene activator protein, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.56  E-value=6.8e-15  Score=104.20  Aligned_cols=107  Identities=19%  Similarity=0.243  Sum_probs=95.9

Q ss_pred             CHHHHHHHHHHCCEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf             99999999830231361589979966886794999991099999905532321213544577546678776642168906
Q 001412          611 TILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKS  690 (1082)
Q Consensus       611 s~~~l~~l~~~l~~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~l~  690 (1082)
                      ++.+++.++..++.+.|++|++|+++|++.+.+|||.+|.|+++....                     .+++..+..+.
T Consensus         2 sd~~le~l~~~~~~~~~~~g~~i~~~g~~~~~iy~i~~G~v~~~~~~~---------------------~g~e~~l~~~~   60 (132)
T d1i5za2           2 TDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDE---------------------EGKEMILSYLN   60 (132)
T ss_dssp             CCHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEECCEEEEEECT---------------------TCCEEEEEEEC
T ss_pred             CHHHHHHHHHHCEEEEECCCCEEECCCCCCCEEEEEEECCCEEEECCC---------------------CCHHHHHHHHC
T ss_conf             879999999708999999489998188978879999973321652244---------------------21255665507


Q ss_pred             CCCCCCCEECCCC-CCCCCEEEECCCEEEEEECHHHHHCCCCCCCCCCC
Q ss_conf             8760010001234-86532598406705854022533102577545445
Q 001412          691 EGSYFGEWTLLGE-HMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH  738 (1082)
Q Consensus       691 ~G~~FGe~all~~-~~r~~tv~a~~~~~~~~l~~~~f~~l~g~l~~i~~  738 (1082)
                      +|++||+++++.+ .++.+++.|.+++.++.++++.|.+++...+.+..
T Consensus        61 ~G~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~~~~~~~~~~~  109 (132)
T d1i5za2          61 QGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILM  109 (132)
T ss_dssp             TTCEESCTTTTSSSCBCCSEEEESSCEEEEEEEHHHHHHHHHHCTHHHH
T ss_pred             CCCCCCHHHHHCCCCCCEEEEEECCCEEEEEECHHHHHHHHHHCHHHHH
T ss_conf             5342115999648766618999914538999839999999866999999


No 95 
>d2oz6a2 b.82.3.2 (A:9-142) Cyclic AMP receptor-like protein Vfr {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.55  E-value=1.4e-14  Score=102.27  Aligned_cols=105  Identities=21%  Similarity=0.286  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHCCEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf             99999998302313615899799668867949999910999999055323212135445775466787766421689068
Q 001412          612 ILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSE  691 (1082)
Q Consensus       612 ~~~l~~l~~~l~~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~l~~  691 (1082)
                      ..++++++..++.+.|++|++|+++|++.+.+|+|.+|.|+++....                     .+.+..+..+++
T Consensus         2 ~~~le~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~v~~~~~---------------------~g~~~~~~~~~~   60 (134)
T d2oz6a2           2 LKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDD---------------------DGREMIIGYLNS   60 (134)
T ss_dssp             HHHHHHHHHSSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECT---------------------TSCEEEEEEEET
T ss_pred             HHHHHHHHHHCEEEEECCCCEEEECCCCCCEEEEEEECCCCEEEEEC---------------------CCCCCEEEECCC
T ss_conf             68999999708999989899999499817789999985321566401---------------------233210134158


Q ss_pred             CCCCCCEECCCC----CCCCCEEEECCCEEEEEECHHHHHCCCCCCCCCC
Q ss_conf             760010001234----8653259840670585402253310257754544
Q 001412          692 GSYFGEWTLLGE----HMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKIS  737 (1082)
Q Consensus       692 G~~FGe~all~~----~~r~~tv~a~~~~~~~~l~~~~f~~l~g~l~~i~  737 (1082)
                      |++|||++++.+    .+++++++|.+++.++.++++.|..++...+.+.
T Consensus        61 g~~~G~~~~~~~~~~~~~~~~~~~a~~~~~vl~i~~~~~~~~~~~~~~~~  110 (134)
T d2oz6a2          61 GDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEIL  110 (134)
T ss_dssp             TCEESCTTTCC-----CBCCSEEEESSCEEEEEEEHHHHHHHHHHCHHHH
T ss_pred             CCCCCHHHHHCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHH
T ss_conf             98345187725765454220499988888999982999999998898999


No 96 
>d1o5la1 b.82.3.2 (A:1-129) CRP-like transcriptional regulator TM1171, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.46  E-value=4.5e-14  Score=99.25  Aligned_cols=102  Identities=12%  Similarity=0.107  Sum_probs=90.4

Q ss_pred             HHHHHHHCCEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf             99998302313615899799668867949999910999999055323212135445775466787766421689068760
Q 001412          615 LSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSY  694 (1082)
Q Consensus       615 l~~l~~~l~~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~l~~G~~  694 (1082)
                      +.+++...+.+.|++|++|+.+|++.+++|+|.+|.++++....                     .+.+..+..+++|++
T Consensus         3 l~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~i~~G~v~~~~~~~---------------------~g~~~~~~~~~~g~~   61 (129)
T d1o5la1           3 LKKLLPCGKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSE---------------------NGKTLEIDEIKPVQI   61 (129)
T ss_dssp             GGGGGGGSEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECT---------------------TSCEEEEEEECSSEE
T ss_pred             HHHHHHCCEEEEECCCCEEEECCCCCCEEEEEECCCCEEEEEEC---------------------CCCCCHHHHCCCCCC
T ss_conf             89897478999999999999889867679999605609999630---------------------244202221254432


Q ss_pred             CCCEECCCCCC-CCCEEEECCCEEEEEECHHHHHCCCCCCCCCC
Q ss_conf             01000123486-53259840670585402253310257754544
Q 001412          695 FGEWTLLGEHM-GSLTAVAVDDVVCAILTKEKFDLVVGPLTKIS  737 (1082)
Q Consensus       695 FGe~all~~~~-r~~tv~a~~~~~~~~l~~~~f~~l~g~l~~i~  737 (1082)
                      ||+++++.+.+ ++++++|.+++.++.++++.|..++...+.+.
T Consensus        62 ~g~~~~~~~~~~~~~~~~a~~~~~vl~i~~~~~~~~~~~~~~~~  105 (129)
T d1o5la1          62 IASGFIFSSEPRFPVNVVAGENSKILSIPKEVFLDLLMKDRELL  105 (129)
T ss_dssp             SSGGGTTSSSCBCSSEEEESSSEEEEEEEHHHHHHHHHHCHHHH
T ss_pred             CCHHHHHCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHCHHHH
T ss_conf             21477750488864799961333899984999999998699999


No 97 
>d2zcwa2 b.82.3.2 (A:6-117) Transcriptional regulator TTHA1359, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=99.45  E-value=7.1e-14  Score=98.04  Aligned_cols=89  Identities=25%  Similarity=0.258  Sum_probs=79.5

Q ss_pred             CEEEECCCCEEEECCC--CCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEC
Q ss_conf             3136158997996688--67949999910999999055323212135445775466787766421689068760010001
Q 001412          623 SEVSFSAGQTIVNMNE--GVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTL  700 (1082)
Q Consensus       623 ~~~~~~~g~~I~~~g~--~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~l~~G~~FGe~al  700 (1082)
                      +.+.|++|++||.+|+  +.+.+|+|.+|.|++++...                     .|++..+..+.+|++|||.++
T Consensus         1 e~~~~~~ge~i~~~Ge~~~~~~~y~i~~G~v~i~~~~~---------------------~G~e~~~~~~~~G~~~G~~~l   59 (112)
T d2zcwa2           1 ETVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDE---------------------EGNALTLRLVRPGGFFGEEAL   59 (112)
T ss_dssp             -CEEECTTCEEECSBSCCTTCCCEEEEESCEEEEEECT---------------------TSCEEEEEEECTTCEECTHHH
T ss_pred             CEEEECCCCEEEECCCCCCCCEEEEEEECCCEEEEEEC---------------------CCCCCEECCCCCCCCCHHHHH
T ss_conf             95898899999979998877789999986614787501---------------------220000001012333025777


Q ss_pred             CCCCCCCCEEEECCCEEEEEECHHHHHCCCCCC
Q ss_conf             234865325984067058540225331025775
Q 001412          701 LGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPL  733 (1082)
Q Consensus       701 l~~~~r~~tv~a~~~~~~~~l~~~~f~~l~g~l  733 (1082)
                      +.+ ++.++++|.+++.++.|++++|..++...
T Consensus        60 ~~~-~~~~~~~A~~~~~i~~i~~~~~~~l~~~~   91 (112)
T d2zcwa2          60 FGQ-ERIYFAEAATDVRLEPLPENPDPELLKDL   91 (112)
T ss_dssp             HTC-CBCSEEEESSCEEEEECCSSCCHHHHHHH
T ss_pred             CCC-CCEEEEEEEECEEEEEEEHHHHHHHHHHH
T ss_conf             289-83279999204899999968989999999


No 98 
>d1ft9a2 b.82.3.1 (A:2-133) CO-sensing protein CooA, N-terminal domain {Rhodospirillum rubrum [TaxId: 1085]}
Probab=99.41  E-value=6.4e-14  Score=98.28  Aligned_cols=106  Identities=8%  Similarity=0.111  Sum_probs=95.0

Q ss_pred             HHHHCCCCHHHHHHHHHHCCEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             24310389999999983023136158997996688679499999109999990553232121354457754667877664
Q 001412          604 VDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSK  683 (1082)
Q Consensus       604 v~~f~~Ls~~~l~~l~~~l~~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  683 (1082)
                      .++|..|+..+++.+...++.+.|++|++|+.+|+..+.+|+|.+|.++++...+                      +++
T Consensus         4 ~~~~~~L~~~~~~~~~~~~~~~~~~kG~~i~~~g~~~~~ly~v~~G~v~~~~~~~----------------------g~e   61 (132)
T d1ft9a2           4 FNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGE----------------------ERE   61 (132)
T ss_dssp             CCTHHHHTSTTTTTTTTTCEEEEECTTCEEECTTCCCCCEEEEEESEEEEEEEET----------------------TEE
T ss_pred             CCHHHHCCHHHHHHHHHHCEEEEECCCCEEECCCCCCCEEEEEEECEEEEECCCC----------------------CCC
T ss_conf             6765759989999999748789841870788799977789999767585520454----------------------100


Q ss_pred             CEEEEECCCCCCCCEECCCCCCCCCEEEECCCEEEEEECHHHHHCCCCCCCCCCC
Q ss_conf             2168906876001000123486532598406705854022533102577545445
Q 001412          684 ELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH  738 (1082)
Q Consensus       684 ~~i~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~l~~~~f~~l~g~l~~i~~  738 (1082)
                      ..+..+++|++||+.       +++++.|++++.++.++++.|..++...+++..
T Consensus        62 ~~l~~~~~g~~f~~~-------~~~~v~A~~~s~v~~i~~~~~~~ll~~~p~~~~  109 (132)
T d1ft9a2          62 ISLFYLTSGDMFCMH-------SGCLVEATERTEVRFADIRTFEQKLQTCPSMAW  109 (132)
T ss_dssp             EEEEEEETTCEEESC-------SSCEEEESSCEEEEEECHHHHHHHHHHCGGGHH
T ss_pred             EEECCCCCCCCCCCC-------CCCCCEECCCEEEEEEHHHHHHHHHHHHHHHHH
T ss_conf             010001222223234-------556123210101310018899999998999999


No 99 
>d3e5ua2 b.82.3.2 (A:9-147) Chlorophenol reduction protein CprK {Desulfitobacterium hafniense [TaxId: 49338]}
Probab=99.39  E-value=1.5e-13  Score=96.05  Aligned_cols=108  Identities=12%  Similarity=0.175  Sum_probs=94.7

Q ss_pred             HCCCCHHHHHHHHHHCCEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             10389999999983023136158997996688679499999109999990553232121354457754667877664216
Q 001412          607 LSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELS  686 (1082)
Q Consensus       607 f~~Ls~~~l~~l~~~l~~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i  686 (1082)
                      +.-++.+++++++.....++|++|++|+++|+..+.+|+|.+|.|++++...                     .+++..+
T Consensus         9 ~~~~p~e~l~~l~~~~~~~~y~kg~~i~~~g~~~~~~y~v~~G~v~~~~~~~---------------------~g~~~~l   67 (139)
T d3e5ua2           9 DNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFE---------------------DGSEKLL   67 (139)
T ss_dssp             BSCSCCGGGGGGGGGSEEEEECTTCEEECTTCCCCSEEEEEESEEEEEEECT---------------------TSCEEEE
T ss_pred             CCCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCEEEEEEECCCEEEEEEC---------------------CCCCCCE
T ss_conf             8789999999999718899988999899579977889999964465888612---------------------2332101


Q ss_pred             EEECCCCCCCCEECCCCCCCCCEEEECCCEEEEEECHHHHHCCCCCCCCCCC
Q ss_conf             8906876001000123486532598406705854022533102577545445
Q 001412          687 VEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH  738 (1082)
Q Consensus       687 ~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~l~~~~f~~l~g~l~~i~~  738 (1082)
                      ..+++|++||++.+   .+++.+++|.+++.++.++++.|..++...+++..
T Consensus        68 ~~~~~g~~~g~~~~---~~~~~~~~a~~~~~v~~i~~~~f~~l~~~~p~l~~  116 (139)
T d3e5ua2          68 YYAGGNSLIGKLYP---TGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIF  116 (139)
T ss_dssp             EEEETTCEECCCSC---CSCEEEEEESSCEEEEEECHHHHHHHHHHCTHHHH
T ss_pred             EECCCCCEEEHHHH---HCCCCCCCCCCCCEEEEEEHHHHHHHHHCCHHHHH
T ss_conf             23253326402123---02210000024236789608999998830999999


No 100
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.80  E-value=2.8e-08  Score=64.16  Aligned_cols=141  Identities=11%  Similarity=0.039  Sum_probs=94.3

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEE
Q ss_conf             67808998846789489999999499939999994020110202499999998333118986621420289841891899
Q 001412          768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL  847 (1082)
Q Consensus       768 ~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~l  847 (1082)
                      ++.|+..+..+.+..+.||.+.  ..+..+.+|.........   ...+.+|...+..+...--+|+++.+..+....++
T Consensus        13 ~~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~---~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~l   87 (263)
T d1j7la_          13 IEKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HTTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HHCEEEEECCCCCCCCCEEEEE--ECCCEEEEEECCCCCCCC---HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE
T ss_conf             1352799767899877189999--089869999848876532---55699999999987606998728999750896499


Q ss_pred             EEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------------
Q ss_conf             991258889778742999999999999999999999998-----------------------------------------
Q 001412          848 LLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHK-----------------------------------------  886 (1082)
Q Consensus       848 v~E~~~g~~L~~~l~~~l~~~~~~~i~~qi~~aL~~LH~-----------------------------------------  886 (1082)
                      ||++++|.++.........   ...++.++...+..||+                                         
T Consensus        88 v~~~l~G~~~~~~~~~~~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (263)
T d1j7la_          88 LMSEADGVLCSEEYEDEQS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF  164 (263)
T ss_dssp             EEECCSSEEHHHHTTTCSC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSC
T ss_pred             EEEECCCCCCCCCCCCCCC---HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             9986043343543344026---9999998999999985568421435764465655577899877655554303323200


Q ss_pred             ------------------CCCEECCCCCCCEEECCCCCEEEEECCCCC
Q ss_conf             ------------------797845569995997579959999527874
Q 001412          887 ------------------RGVLYRGVSPDVLMLDKSGHLQLVDFRFGK  916 (1082)
Q Consensus       887 ------------------~givHrDLkp~NIlid~~g~vkL~DFg~a~  916 (1082)
                                        ..++|+|+.|.|||++.++.+-|+||+.+.
T Consensus       165 ~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         165 KDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             SSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCCEEEEEECHHCC
T ss_conf             579999999984498678178986004764236499659996023144


No 101
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=98.37  E-value=1.6e-06  Score=53.62  Aligned_cols=82  Identities=10%  Similarity=0.016  Sum_probs=52.7

Q ss_pred             EEEECCCCCEEEEEEEECCCCCEEEEEEEECHH-HHC---CCHHHHHHHHHHHHCCCC--CCCCCCCEEEEEEECCEEEE
Q ss_conf             988467894899999994999399999940201-102---024999999983331189--86621420289841891899
Q 001412          774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQK-VKC---LGKEVQVLKEKNLMKSVS--PSACVPQILCTCADSMHAGL  847 (1082)
Q Consensus       774 ~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~-~~~---~~~~~~~~~E~~il~~l~--~~~~I~~l~~~~~~~~~~~l  847 (1082)
                      .+.+|.|....||.+....+++.+++|.-.... +..   .....+...|...|..+.  -+..+|+++.+  +....++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEECCCCEEEEEEEEECCCCEEEEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE--CCCCCEE
T ss_conf             99807985276899995799848999617713034677788877899999999998650579885528998--5988779


Q ss_pred             EEECCCCCCH
Q ss_conf             9912588897
Q 001412          848 LLNTYLACPL  857 (1082)
Q Consensus       848 v~E~~~g~~L  857 (1082)
                      +||++.+..+
T Consensus       109 vmE~L~~~~~  118 (392)
T d2pula1         109 VMEDLSHLKI  118 (392)
T ss_dssp             EECCCTTSEE
T ss_pred             EEECCCCCCC
T ss_conf             8713577653


No 102
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=98.18  E-value=1e-05  Score=48.72  Aligned_cols=135  Identities=12%  Similarity=0.047  Sum_probs=81.1

Q ss_pred             CCEEEEEEECCCC-CEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCC-CCCEEEEEEECCEEE
Q ss_conf             7808998846789-48999999949993999999402011020249999999833311898662-142028984189189
Q 001412          769 TDMEWRKCLYSTD-CSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC-VPQILCTCADSMHAG  846 (1082)
Q Consensus       769 ~~y~i~~~LG~G~-~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~-I~~l~~~~~~~~~~~  846 (1082)
                      ..+++. .+..|. ...||.+... .+..+.+|.......      ..+..|...++.+..... +|+++....+....+
T Consensus        11 ~g~~~~-~~~~G~s~~~v~r~~~~-~~~~~vlK~~~~~~~------~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~   82 (255)
T d1nd4a_          11 FGYDWA-QQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSGAL------NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDW   82 (255)
T ss_dssp             TTCEEE-ECSCTTSSCEEEEEECT-TSCCEEEEEECSCTT------SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEE
T ss_pred             CCCCEE-ECCCCCCCCEEEEEEEC-CCCEEEEEECCCCCH------HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEE
T ss_conf             598358-76786547758999938-987899995896677------6899999999999865999886132224566159


Q ss_pred             EEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHH-----------------------------------------------
Q ss_conf             999125888977874299999999999999999-----------------------------------------------
Q 001412          847 LLLNTYLACPLASILHTPLDEQSARFCAASVVA-----------------------------------------------  879 (1082)
Q Consensus       847 lv~E~~~g~~L~~~l~~~l~~~~~~~i~~qi~~-----------------------------------------------  879 (1082)
                      ++|++++|.++....   +.....   +.++..                                               
T Consensus        83 ~v~~~i~G~~~~~~~---~~~~~~---~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (255)
T d1nd4a_          83 LLLGEVPGQDLLSSH---LAPAEK---VSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL  156 (255)
T ss_dssp             EEEECCSSEETTTSC---CCHHHH---HHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred             EEEEEEECCCCCCCC---CCHHHH---HHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf             998744135543221---268999---99999999987368854488755412468899999987541101134011213


Q ss_pred             ----HHHHHHHC-------CCEECCCCCCCEEECCCCCEEEEECCCCCC
Q ss_conf             ----99999987-------978455699959975799599995278744
Q 001412          880 ----ALEDLHKR-------GVLYRGVSPDVLMLDKSGHLQLVDFRFGKG  917 (1082)
Q Consensus       880 ----aL~~LH~~-------givHrDLkp~NIlid~~g~vkL~DFg~a~~  917 (1082)
                          .+..+...       .++|+|+.|.|||++.++.+-|+||+.+..
T Consensus       157 ~~~~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         157 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEECCCEEEEEECHHCCC
T ss_conf             7999999998718765795678678887635773796589998533265


No 103
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.99  E-value=1.4e-05  Score=47.81  Aligned_cols=83  Identities=17%  Similarity=0.197  Sum_probs=58.3

Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEECC-------CCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEE
Q ss_conf             5576780899884678948999999949-------993999999402011020249999999833311898662142028
Q 001412          765 KVSLTDMEWRKCLYSTDCSEIGLVLLRD-------SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILC  837 (1082)
Q Consensus       765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~~-------~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~  837 (1082)
                      .+..+++++ +.|+.|-.-.+|++....       ..+.+.++++....     ......+|..+++.+...++.|+++.
T Consensus        39 ~~~~~~l~v-~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~-----~~idr~~E~~i~~~ls~~gl~Pkll~  112 (395)
T d1nw1a_          39 TVPLEHLRI-SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-----TESHLVAESVIFTLLSERHLGPKLYG  112 (395)
T ss_dssp             HCCGGGEEE-EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-----CHHHHHHHHHHHHHHHHTTSSSCEEE
T ss_pred             CCCCCCEEE-EECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCC-----HHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             899301699-991785334348999688775445789817999659961-----16589999999999975799980899


Q ss_pred             EEEECCEEEEEEECCCCCCH
Q ss_conf             98418918999912588897
Q 001412          838 TCADSMHAGLLLNTYLACPL  857 (1082)
Q Consensus       838 ~~~~~~~~~lv~E~~~g~~L  857 (1082)
                      ++.+    ++|++|++|..|
T Consensus       113 ~~~~----g~I~efi~g~~l  128 (395)
T d1nw1a_         113 IFSG----GRLEEYIPSRPL  128 (395)
T ss_dssp             EETT----EEEECCCCEEEC
T ss_pred             ECCC----CEEEEEECCCCC
T ss_conf             8189----569997345548


No 104
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.18  E-value=0.0004  Score=39.00  Aligned_cols=145  Identities=16%  Similarity=0.065  Sum_probs=75.9

Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCC-CCCEEE------
Q ss_conf             5576780899884678948999999949993999999402011020249999999833311898662-142028------
Q 001412          765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC-VPQILC------  837 (1082)
Q Consensus       765 ~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~-I~~l~~------  837 (1082)
                      ...+....-.+.|..|--.+.|++.... + .|++|++.+..  ..   ..+..|..++..|....+ ++....      
T Consensus        14 ~Y~lg~~~~~~~i~~G~~N~ny~v~t~~-g-~yVLri~~~~~--~~---~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~   86 (316)
T d2ppqa1          14 QYDVGSLTSYKGIAEGVENSNFLLHTTK-D-PLILTLYEKRV--EK---NDLPFFLGLMQHLAAKGLSCPLPLPRKDGEL   86 (316)
T ss_dssp             TBCCCCEEEEEEECC---EEEEEEEESS-C-CEEEEEECC-----C---CHHHHHHHHHHHHHHTTCCCCCBCCBTTCCS
T ss_pred             HCCCCCCEEEECCCCCCCCCEEEEEECC-C-CEEEEECCCCC--CH---HHHHHHHHHHHHHHHCCCCCCCCCEECCCCC
T ss_conf             6799985685237888526738999789-7-28999807899--98---8999999998754302555455641048976


Q ss_pred             EEEECCEEEEEEECCCCCCHHHH--------------HC---C--------CCCHH------------------HHHHHH
Q ss_conf             98418918999912588897787--------------42---9--------99999------------------999999
Q 001412          838 TCADSMHAGLLLNTYLACPLASI--------------LH---T--------PLDEQ------------------SARFCA  874 (1082)
Q Consensus       838 ~~~~~~~~~lv~E~~~g~~L~~~--------------l~---~--------~l~~~------------------~~~~i~  874 (1082)
                      ...-......++.+..|......              ++   .        .....                  .....+
T Consensus        87 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  166 (316)
T d2ppqa1          87 LGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEI  166 (316)
T ss_dssp             CEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHH
T ss_pred             CEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHCCHHHHHHH
T ss_conf             21341255024531146553332046788888998764544432024531011101200245677776531141279999


Q ss_pred             HHHHHHHHHHH----HCCCEECCCCCCCEEECCCCCEEEEECCCCC
Q ss_conf             99999999999----8797845569995997579959999527874
Q 001412          875 ASVVAALEDLH----KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK  916 (1082)
Q Consensus       875 ~qi~~aL~~LH----~~givHrDLkp~NIlid~~g~vkL~DFg~a~  916 (1082)
                      ..+...+...+    ..|+||+|+.++||+++.+...-++||+.+.
T Consensus       167 ~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         167 RPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             HHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCC
T ss_conf             9998764204855454503337863656402045412674222123


No 105
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=96.64  E-value=0.0019  Score=34.89  Aligned_cols=130  Identities=9%  Similarity=0.040  Sum_probs=64.6

Q ss_pred             CCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCC-CCCE-----EEEEEECCEEEEEEECCC
Q ss_conf             8948999999949993999999402011020249999999833311898662-1420-----289841891899991258
Q 001412          780 TDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC-VPQI-----LCTCADSMHAGLLLNTYL  853 (1082)
Q Consensus       780 G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~-I~~l-----~~~~~~~~~~~lv~E~~~  853 (1082)
                      +.-..||++... ++..|++|+.....    ....++..|...+..|....+ ++..     -..+......+.+++++.
T Consensus        33 s~EN~vy~v~~~-dg~~~VlK~~rp~~----~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~  107 (325)
T d1zyla1          33 SYENRVYQFQDE-DRRRFVVKFYRPER----WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG  107 (325)
T ss_dssp             CSSSEEEEECCT-TCCCEEEEEECTTT----SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred             CCCCEEEEEECC-CCCEEEEEEECCCC----CCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEEEEEEEEEEECC
T ss_conf             612026999838-99979999847877----8899999999999999855998787520689805665347999986527


Q ss_pred             CCCHHH-----H---------HC-----C-------------------------CCCHH---HHHHHHHHHHHHHHHHH-
Q ss_conf             889778-----7---------42-----9-------------------------99999---99999999999999999-
Q 001412          854 ACPLAS-----I---------LH-----T-------------------------PLDEQ---SARFCAASVVAALEDLH-  885 (1082)
Q Consensus       854 g~~L~~-----~---------l~-----~-------------------------~l~~~---~~~~i~~qi~~aL~~LH-  885 (1082)
                      |..+..     +         ++     .                         .++..   .....+..+...+.-+- 
T Consensus       108 G~~~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  187 (325)
T d1zyla1         108 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR  187 (325)
T ss_dssp             CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             76889999999999899999988630357865567789788766568999874769988989999999999999998454


Q ss_pred             ---HCCCEECCCCCCCEEECCCCCEEEEECCCCC
Q ss_conf             ---8797845569995997579959999527874
Q 001412          886 ---KRGVLYRGVSPDVLMLDKSGHLQLVDFRFGK  916 (1082)
Q Consensus       886 ---~~givHrDLkp~NIlid~~g~vkL~DFg~a~  916 (1082)
                         ..+++|+|+.+.|||++. + ..++||+.+.
T Consensus       188 ~~~p~~liHgDlh~~NvL~~~-~-~~~IDFdd~~  219 (325)
T d1zyla1         188 EDFTVLRLHGDCHAGNILWRD-G-PMFVDLDDAR  219 (325)
T ss_dssp             SCSCCEECCSSCSGGGEEESS-S-EEECCCTTCC
T ss_pred             CCCCCEEECCCCCCCCEEEEC-C-CEEEECHHCC
T ss_conf             568712024788804287838-9-3588652014


No 106
>d1yhfa1 b.82.1.9 (A:1-112) Hypothetical protein SPy1581 {Streptococcus pyogenes [TaxId: 1314]}
Probab=73.65  E-value=1.6  Score=17.22  Aligned_cols=69  Identities=14%  Similarity=0.144  Sum_probs=44.5

Q ss_pred             CCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEECHHHCCCCCCEEEEEECCCC
Q ss_conf             16589946998899256878938999975999999705777422447542136888904201010699831399983111
Q 001412          495 CMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNG  574 (1082)
Q Consensus       495 ~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l~~G~~FGe~all~~~~r~atv~A~~~~  574 (1082)
                      .+....+++|+.+-..-.+++.+|+|++|++.+...+.   .   .     .+.+|+++=-     ..--...++|.+++
T Consensus        38 ~i~~~~~~~G~~~~~H~h~~~~~~~vl~G~~~~~~~~~---~---~-----~l~~Gd~~~i-----p~~~~H~~~a~~~~  101 (112)
T d1yhfa1          38 GITVFSLDKGQEIGRHSSPGDAMVTILSGLAEITIDQE---T---Y-----RVAEGQTIVM-----PAGIPHALYAVEAF  101 (112)
T ss_dssp             EEEEEEECTTCEEEEECCSSEEEEEEEESEEEEEETTE---E---E-----EEETTCEEEE-----CTTSCEEEEESSCE
T ss_pred             EEEEEEECCCCCCCEEECCCCEEEEEEECEEEEEECCE---E---E-----EECCCEEEEC-----CCCCEEEEEECCCC
T ss_conf             89999999999754088999889999958799998649---9---9-----9257889996-----89985996978996


Q ss_pred             EEEEE
Q ss_conf             05642
Q 001412          575 MLWAL  579 (1082)
Q Consensus       575 ~l~~l  579 (1082)
                      .++.+
T Consensus       102 ~~l~~  106 (112)
T d1yhfa1         102 QMLLV  106 (112)
T ss_dssp             EEEEE
T ss_pred             EEEEE
T ss_conf             89999


No 107
>d2d40a1 b.82.1.23 (A:35-342) Gentisate 1,2-dioxygenase {Escherichia coli [TaxId: 562]}
Probab=66.87  E-value=2.3  Score=16.32  Aligned_cols=31  Identities=6%  Similarity=0.097  Sum_probs=13.8

Q ss_pred             EEEECCCCEEEECCCCCCEEEEEEEEEEEEE
Q ss_conf             8994699889925687893899997599999
Q 001412          498 RVEVQAGDIVVKQGGEGDCFYVVGSGEFEVM  528 (1082)
Q Consensus       498 ~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~  528 (1082)
                      ...+++|+.+-..-.....+++|++|+..++
T Consensus        58 ~~~l~PG~~~~~H~H~~~e~~~vl~G~g~~t   88 (308)
T d2d40a1          58 LQLIMPGEVAPSHRHNQSALRFIVEGKGAFT   88 (308)
T ss_dssp             EEEECTTCEEEEEEESSCEEEEEEECSSCEE
T ss_pred             EEEECCCCCCCCCCCCHHHEEEEEEEEEEEE
T ss_conf             4999999856202396211689997238999


No 108
>d2bnma2 b.82.1.10 (A:77-198) Hydroxypropylphosphonic acid epoxidase Fom4, C-terminal domain {Streptomyces wedmorensis [TaxId: 43759]}
Probab=49.19  E-value=4.6  Score=14.47  Aligned_cols=64  Identities=17%  Similarity=0.121  Sum_probs=35.3

Q ss_pred             EEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEECHHHCCCCCCEEEEE-ECCCCEEEEE
Q ss_conf             8992568789389999759999997057774224475421368889042010106998313999-8311105642
Q 001412          506 IVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVR-AVTNGMLWAL  579 (1082)
Q Consensus       506 ~I~~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l~~G~~FGe~all~~~~r~atv~-A~~~~~l~~l  579 (1082)
                      .-...+..+..|++|++|++++...+....+       .+.+++||++---+   +.|+...-. ..+.+.++++
T Consensus        56 ~~~~~~H~~eE~~yVl~G~~~~~~g~~~~~~-------~~~l~~GDsi~~~~---~~pH~~~n~~g~~~a~~l~V  120 (122)
T d2bnma2          56 AKFNSGHAGNEFLFVLEGEIHMKWGDKENPK-------EALLPTGASMFVEE---HVPHAFTAAKGTGSAKLIAV  120 (122)
T ss_dssp             CCCCCCCSSCEEEEEEESCEEEEESCTTSCE-------EEEECTTCEEEECT---TCCEEEEESTTSCCEEEEEE
T ss_pred             CCCCCCCCCEEEEEEEEEEEEEEEECCCCCE-------EEEECCCCEEEECC---CCCEEEECCCCCCCEEEEEE
T ss_conf             6557895667999999989999994026878-------99970676799489---99777795899952999999


No 109
>d1lr5a_ b.82.1.2 (A:) Auxin binding protein {Maize (Zea mays) [TaxId: 4577]}
Probab=46.24  E-value=5.1  Score=14.19  Aligned_cols=35  Identities=11%  Similarity=0.197  Sum_probs=17.2

Q ss_pred             CEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEEC
Q ss_conf             31361589979966886794999991099999905
Q 001412          623 SEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDA  657 (1082)
Q Consensus       623 ~~~~~~~g~~I~~~g~~~~~~yiI~~G~v~i~~~~  657 (1082)
                      ....+++|...-.--.....+|+|++|+..++..+
T Consensus        44 ~~~~l~PG~~~~~H~H~~~e~~~Vl~G~g~~~i~~   78 (160)
T d1lr5a_          44 WLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGS   78 (160)
T ss_dssp             EEEEECTTCBCCEEEESSCEEEEEEECCEEEEECC
T ss_pred             EEEEECCCCCCCCEECCCCEEEEEEEEEEEEEECC
T ss_conf             99999999660614056648999996037999888


No 110
>d2b8ma1 b.82.1.18 (A:1-108) Hypothetical protein MJ0764 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=35.65  E-value=7.5  Score=13.18  Aligned_cols=35  Identities=11%  Similarity=0.247  Sum_probs=24.4

Q ss_pred             CEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEE
Q ss_conf             65899469988992568789389999759999997
Q 001412          496 MQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMAT  530 (1082)
Q Consensus       496 ~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~  530 (1082)
                      +....+++|+.+-..-.+.+.+++|++|+..+...
T Consensus        28 v~~~~l~pG~~~p~H~H~~~e~~~Vl~G~~~~~v~   62 (108)
T d2b8ma1          28 INHIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTLE   62 (108)
T ss_dssp             EEEEEEETTCBCCCEECSSCEEEEEEESEEEEEET
T ss_pred             EEEEEECCCCCCHHHCCCCCEEEEEEEEEEEEEEE
T ss_conf             99999999996821312666899999656999993


No 111
>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}
Probab=34.51  E-value=7.8  Score=13.07  Aligned_cols=142  Identities=12%  Similarity=0.083  Sum_probs=72.7

Q ss_pred             CCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEE--
Q ss_conf             565576780899884678948999999949993999999402011020249999999833311898662142028984--
Q 001412          763 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA--  840 (1082)
Q Consensus       763 ~~~~~~~~y~i~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~k~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~--  840 (1082)
                      +....+++++-++.=-.|+-|..| +..  +...+++|-...      -..+.+..++.....+.-|. . +++..+.  
T Consensus        63 ~~~~~l~~~K~i~~s~~Gs~Gv~F-V~~--e~gaiVlK~s~t------ta~E~y~~eLAr~LGvpvPq-m-RvI~~~~~E  131 (342)
T d1cjaa_          63 INWKNLQQFKGIERSEKGTEGLFF-VET--ESGVFIVKRSTN------IESETFCSLLCMRLGLHAPK-V-RVVSSNSEE  131 (342)
T ss_dssp             CCTTCGGGEEEEEECCSTTSCEEE-EEE--SSCEEEEECCTT------HHHHHHHHHHHHHHTCCCCC-E-EEEESSSHH
T ss_pred             CHHHHHHHHHCEEEEECCCCEEEE-EEC--CCCEEEEECCCC------HHHHHHHHHHHHHHCCCCCC-E-EEECCCCHH
T ss_conf             003437763126775469845899-983--786699955884------29999999999995999985-6-885277789


Q ss_pred             ---------------------ECCEEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHH--HHHHH-HHHHC---CCEECC
Q ss_conf             ---------------------1891899991258889778742999999999999999--99999-99987---978455
Q 001412          841 ---------------------DSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASV--VAALE-DLHKR---GVLYRG  893 (1082)
Q Consensus       841 ---------------------~~~~~~lv~E~~~g~~L~~~l~~~l~~~~~~~i~~qi--~~aL~-~LH~~---givHrD  893 (1082)
                                           ......++|||++|..|...-....++......+.++  +.++. +++..   .+.+++
T Consensus       132 ~~~~~~~~l~~~e~d~~I~sel~~A~~liMeYvpG~~l~e~~~~~a~~~fs~~~l~~LGkIiaFDifInN~DR~PL~Wrn  211 (342)
T d1cjaa_         132 GTNMLECLAAIDKSFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTN  211 (342)
T ss_dssp             HHHHHHHHHHHCSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCS
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             99987777437880478888875144010003278420124331230110579999865699899997177666521157


Q ss_pred             C-CCCCEEECCCC-CEEEEECCCC
Q ss_conf             6-99959975799-5999952787
Q 001412          894 V-SPDVLMLDKSG-HLQLVDFRFG  915 (1082)
Q Consensus       894 L-kp~NIlid~~g-~vkL~DFg~a  915 (1082)
                      - .++|+|++.++ ++..+|=+..
T Consensus       212 ~GN~~Niml~~n~~~~~~IDs~i~  235 (342)
T d1cjaa_         212 EGNLDNIMLSERGATVVPIDSKII  235 (342)
T ss_dssp             CCCGGGEEEESBTTCEEECSCCCC
T ss_pred             CCCCCCEEEECCCCEEEEECCCCC
T ss_conf             887001577059858999668864


No 112
>d1vj2a_ b.82.1.10 (A:) Hypothetical protein TM1459 {Thermotoga maritima [TaxId: 2336]}
Probab=30.89  E-value=9  Score=12.71  Aligned_cols=36  Identities=17%  Similarity=0.266  Sum_probs=24.6

Q ss_pred             CCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEEE
Q ss_conf             165899469988992568789389999759999997
Q 001412          495 CMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMAT  530 (1082)
Q Consensus       495 ~~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~~  530 (1082)
                      .+...++++|..+-..-.+...+++|++|++.+...
T Consensus        37 ~~~~~~i~pG~~~~~H~H~~~e~~~vl~G~~~~~~~   72 (114)
T d1vj2a_          37 VMRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLKE   72 (114)
T ss_dssp             EEEEEEEEEEEEEEEECCSSCEEEEEEESEEEEECS
T ss_pred             EEEEEEECCCCCCCCEECCCCEEEEEEECEEEEEEE
T ss_conf             999999999988785689871899999765689996


No 113
>d1y9qa2 b.82.1.15 (A:83-181) Probable transcriptional regulator VC1968, C-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=29.39  E-value=9.5  Score=12.55  Aligned_cols=48  Identities=6%  Similarity=-0.053  Sum_probs=27.1

Q ss_pred             CEEEEECCCCEEEECC--CCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEE
Q ss_conf             6589946998899256--8789389999759999997057774224475421368889042
Q 001412          496 MQRVEVQAGDIVVKQG--GEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFG  554 (1082)
Q Consensus       496 ~~~~~~~~G~~I~~qG--d~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l~~G~~FG  554 (1082)
                      +...++++|.....+.  ..+..+++|++|++.+...+.           .+++++||++-
T Consensus        24 ~~~~~l~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~~~~-----------~~~l~~GD~~~   73 (99)
T d1y9qa2          24 IFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFFDEQ-----------WHELQQGEHIR   73 (99)
T ss_dssp             EEEEEECTTCEEEECCCSTTCEEEEEEEESCEEEEETTE-----------EEEECTTCEEE
T ss_pred             EEEEEEECCCEECCCCCCCCCEEEEEEECCCEEEEECCE-----------EEEECCCCEEE
T ss_conf             999999478485454646996799999758169983223-----------88703898999


No 114
>d1e7ua4 d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (PI3K), catalytic domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=24.91  E-value=11  Score=12.06  Aligned_cols=70  Identities=16%  Similarity=0.101  Sum_probs=38.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCC-EEEEECCCCCCHHHHCCC
Q ss_conf             999999999999999987978455699959975799599995278744799973-037522688890234379
Q 001412          870 ARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGNRT-FTICGMADYLAPEIVQGK  941 (1082)
Q Consensus       870 ~~~i~~qi~~aL~~LH~~givHrDLkp~NIlid~~g~vkL~DFg~a~~~~~~~~-~~~~gt~~y~aPE~~~~~  941 (1082)
                      ...++..++..--..+=.||  +|=.++|||++.+|++.=+|||+.-....... ...--.|-=+.||++...
T Consensus       200 ~~nF~~S~A~~sv~~YiLGi--gDRH~~NILi~~~G~l~HIDFG~il~~~~~~~~~~~E~vPFrLT~~~v~~m  270 (369)
T d1e7ua4         200 VERFVYSCAGYCVATFVLGI--GDRHNDNIMISETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVM  270 (369)
T ss_dssp             HHHHHHHHHHHHHHHHHTTC--CCCCGGGEEEETTCCEEECCCCCC----------CCCCCSSCCCHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHCC--CCCCCCEEEEECCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             99998878999999998546--788977068958999870416666412765578898899841349999985


No 115
>d1sefa_ b.82.1.11 (A:) Hypothetical protein EF2996 {Enterococcus faecalis [TaxId: 1351]}
Probab=24.31  E-value=12  Score=11.99  Aligned_cols=158  Identities=12%  Similarity=0.018  Sum_probs=78.5

Q ss_pred             CCEEEEECCCCEEEECC--CCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEECHHHCCCCCCEEEEEECC
Q ss_conf             16589946998899256--8789389999759999997057774224475421368889042010106998313999831
Q 001412          495 CMQRVEVQAGDIVVKQG--GEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVT  572 (1082)
Q Consensus       495 ~~~~~~~~~G~~I~~qG--d~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l~~G~~FGe~all~~~~r~atv~A~~  572 (1082)
                      .+...++.+|......-  +....|++|++|++.+...+.   .        +.+++|+++=--   .+.++...-...+
T Consensus        49 ~~~~v~l~pg~~~~~~~~~~~~Ee~~yVl~G~~~~~~~~~---~--------~~l~~Gd~~~~p---~~~~H~~~N~~~~  114 (250)
T d1sefa_          49 VDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQE---T--------HELEAGGYAYFT---PEMKMYLANAQEA  114 (250)
T ss_dssp             EEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECSSC---E--------EEEETTEEEEEC---TTSCCEEEESSSS
T ss_pred             EEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCE---E--------EEECCCCEEEEC---CCCCEEEEECCCC
T ss_conf             9999998489634777778985899999966899999999---9--------887699899993---9983998989999


Q ss_pred             CCEEEEECHHHHHHHHHHHHHH----HHH-----HHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCEE-EECCCCCCE
Q ss_conf             1105642177788755222357----899-----899654243103899999999830231361589979-966886794
Q 001412          573 NGMLWALKREDFRGILMSEFSN----LSS-----LKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTI-VNMNEGVAA  642 (1082)
Q Consensus       573 ~~~l~~l~~~~f~~il~~~~~~----~~~-----l~~L~~v~~f~~Ls~~~l~~l~~~l~~~~~~~g~~I-~~~g~~~~~  642 (1082)
                      +++++.+.+. |...-...+..    ...     ..-.... .+..+...+... .-.+....+++|..+ ...-...+.
T Consensus       115 ~~~~l~v~~~-y~~~~~~~p~~~~~~~~~~e~~~~~~~~~~-~~~~~~p~~~~~-~~~~~~~~~~PG~~~~~~h~h~~ee  191 (250)
T d1sefa_         115 DTEVFLYKKR-YQPLAGHQPYKVVGSIHDQQPEEYEGMTDV-LLWSLLPKEFDF-DMNMHILSFEPGASHAYIETHVQEH  191 (250)
T ss_dssp             CEEEEEEEEE-CCCCTTCCCCCEEEEGGGSCCEEGGGCTTE-EEEECSCSSTTC-SEEEEEEEECTTCBCSSCBCCSCCE
T ss_pred             CEEEEEEEEE-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEECCCCCCC-CEEEEEEEECCCCCCCCCCCCCCEE
T ss_conf             8899999973-224665566544465133665225886520-068735766455-2799999978997268538557439


Q ss_pred             EEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf             999991099999905532321213544577546678776642168906876001
Q 001412          643 LYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFG  696 (1082)
Q Consensus       643 ~yiI~~G~v~i~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~l~~G~~FG  696 (1082)
                      +++|++|++.++....                           ...+++||++-
T Consensus       192 ~~~vl~G~~~~~~~~~---------------------------~~~~~~GD~i~  218 (250)
T d1sefa_         192 GAYLISGQGMYNLDNE---------------------------WYPVEKGDYIF  218 (250)
T ss_dssp             EEEEEECEEEEEETTE---------------------------EEEEETTCEEE
T ss_pred             EEEEECCEEEEEECCE---------------------------EEEECCCCEEE
T ss_conf             9999677899999999---------------------------99956998999


No 116
>d1v70a_ b.82.1.9 (A:) Hypothetical protein TTHA0104 {Thermus thermophilus [TaxId: 274]}
Probab=23.40  E-value=12  Score=11.88  Aligned_cols=69  Identities=14%  Similarity=0.111  Sum_probs=37.9

Q ss_pred             CEEEEECCCCEEEECCCCC-CEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEECHHHCC-CCCCEEEEEECCC
Q ss_conf             6589946998899256878-9389999759999997057774224475421368889042010106-9983139998311
Q 001412          496 MQRVEVQAGDIVVKQGGEG-DCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMY-NKPLQASVRAVTN  573 (1082)
Q Consensus       496 ~~~~~~~~G~~I~~qGd~~-~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l~~G~~FGe~all~-~~~r~atv~A~~~  573 (1082)
                      +....+++|+.+-..-.+. +.+|+|++|++.+...+   +.   .     .+.+|+++    .+. +.++.......++
T Consensus        30 ~~~~~~~PG~~~~~H~H~~~~e~~~vl~G~~~~~~~~---~~---~-----~l~~Gd~~----~~p~~~~H~~~n~g~~~   94 (105)
T d1v70a_          30 YDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGE---EE---A-----LLAPGMAA----FAPAGAPHGVRNESASP   94 (105)
T ss_dssp             EEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEETT---EE---E-----EECTTCEE----EECTTSCEEEECCSSSC
T ss_pred             EEEEEECCCCCCCCEECCCCEEEEEEEEEEEEEEEEE---EE---E-----EECCEEEE----EECCCCEEEEEECCCCC
T ss_conf             9999999999996669999809999992279999914---67---9-----95113799----94899979869999999


Q ss_pred             CEEEEE
Q ss_conf             105642
Q 001412          574 GMLWAL  579 (1082)
Q Consensus       574 ~~l~~l  579 (1082)
                      +.++.+
T Consensus        95 ~~~l~v  100 (105)
T d1v70a_          95 ALLLVV  100 (105)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
T ss_conf             999999


No 117
>d2f4pa1 b.82.1.9 (A:2-135) Hypothetical protein TM1010 {Thermotoga maritima [TaxId: 2336]}
Probab=21.66  E-value=13  Score=11.67  Aligned_cols=34  Identities=15%  Similarity=0.085  Sum_probs=25.5

Q ss_pred             CEEEEECCCCEEEECCCCCCEEEEEEEEEEEEEE
Q ss_conf             6589946998899256878938999975999999
Q 001412          496 MQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMA  529 (1082)
Q Consensus       496 ~~~~~~~~G~~I~~qGd~~~~~yiI~~G~v~v~~  529 (1082)
                      +....|++|...-..-.+...+++|++|+..+..
T Consensus        37 ~~~vtf~PG~~~~~H~H~~~q~~~Vl~G~~~~~~   70 (134)
T d2f4pa1          37 VYDVVFEPGARTHWHSHPGGQILIVTRGKGFYQE   70 (134)
T ss_dssp             EEEEEECTTCEECSEECTTCEEEEEEEEEEEEEE
T ss_pred             EEEEEECCCCCCCCCCCCCCEEEEEEECEEEEEE
T ss_conf             9999989998674323888879999828899998


No 118
>d1rc6a_ b.82.1.11 (A:) Hypothetical protein YlbA {Escherichia coli [TaxId: 562]}
Probab=21.53  E-value=13  Score=11.66  Aligned_cols=158  Identities=13%  Similarity=0.028  Sum_probs=73.1

Q ss_pred             EEEEECCCCEEEECC--CCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEECHHHCCCCCCEEEEEECCCC
Q ss_conf             589946998899256--878938999975999999705777422447542136888904201010699831399983111
Q 001412          497 QRVEVQAGDIVVKQG--GEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNG  574 (1082)
Q Consensus       497 ~~~~~~~G~~I~~qG--d~~~~~yiI~~G~v~v~~~~~~~~~~~~~~i~~~~l~~G~~FGe~all~~~~r~atv~A~~~~  574 (1082)
                      ...++++|.-.-..-  +..+.|++|++|++.+...+   +        .+.+++|+++--.   .+.++...-...+++
T Consensus        54 ~~v~l~pG~~~~~~~h~~~~Ee~~~Vl~G~~~~~~~~---~--------~~~l~~Gd~~~~p---~~~~H~~~N~~~~~~  119 (253)
T d1rc6a_          54 YLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEG---K--------TFALSEGGYLYCP---PGSLMTFVNAQAEDS  119 (253)
T ss_dssp             EEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEETT---E--------EEEEETTEEEEEC---TTCCCEEEECSSSCE
T ss_pred             EEEEECCCCCCCCCCCCCCCEEEEEEEECEEEEEECC---E--------EEEECCCCEEEEC---CCCCEEEEECCCCCE
T ss_conf             9999889966587666788579999997979999999---9--------9998789999977---999789998999988


Q ss_pred             EEEEECHHH-H-HHHHHHHH--HHHH--HHHHHH-HHHHHCCCCHHHHHHHHHHCCEEEECCCCEE-EECCCCCCEEEEE
Q ss_conf             056421777-8-87552223--5789--989965-4243103899999999830231361589979-9668867949999
Q 001412          575 MLWALKRED-F-RGILMSEF--SNLS--SLKLLR-SVDLLSRLTILQLSHLADTLSEVSFSAGQTI-VNMNEGVAALYII  646 (1082)
Q Consensus       575 ~l~~l~~~~-f-~~il~~~~--~~~~--~l~~L~-~v~~f~~Ls~~~l~~l~~~l~~~~~~~g~~I-~~~g~~~~~~yiI  646 (1082)
                      +++.+.+.. . ...-....  ....  ....-. ....++.+...+... .-.+....+.+|..+ +..-...+.+++|
T Consensus       120 ~~l~v~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~PG~~~~~~h~h~~ee~~~v  198 (253)
T d1rc6a_         120 QIFLYKRRYVPVEGYAPWLVSGNASELERIHYEGMDDVILLDFLPKELGF-DMNMHILSFAPGASHGYIETHVQEHGAYI  198 (253)
T ss_dssp             EEEEEEEECCCCTTCCCCCEEEEGGGSCCC-------CEEEECSCCSTTC-SEEEEEEEECTTCCBEEEEEESSCEEEEE
T ss_pred             EEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCC-CEEEEEEEECCCCEEEEEEECCCEEEEEE
T ss_conf             99999963556777421010254123666554443126888725766564-18999999899806767796773499999


Q ss_pred             EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf             91099999905532321213544577546678776642168906876001
Q 001412          647 QRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFG  696 (1082)
Q Consensus       647 ~~G~v~i~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~l~~G~~FG  696 (1082)
                      ++|+..+.....                           ...+++||++=
T Consensus       199 l~G~g~~~i~~~---------------------------~~~~~~GD~i~  221 (253)
T d1rc6a_         199 LSGQGVYNLDNN---------------------------WIPVKKGDYIF  221 (253)
T ss_dssp             EESEEEEESSSC---------------------------EEEEETTCEEE
T ss_pred             ECCEEEEEECCE---------------------------EEEECCCCEEE
T ss_conf             687799999999---------------------------99966998999


Done!