Query 001423
Match_columns 1079
No_of_seqs 331 out of 2210
Neff 6.1
Searched_HMMs 29240
Date Tue Mar 26 17:43:34 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001423.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_722-726//hhsearch_pdb/001423hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zcd_A Na(+)/H(+) antiporter 1 1.0 1 1 119.2 14.6 274 99-410 61-350 (388)
2 2l0e_A Sodium/hydrogen exchang 1.0 1 1 54.2 -0.9 31 157-187 2-32 (33)
3 2htg_A NHE-1, NHE1 isoform of 1.0 1 1 45.0 -3.9 27 184-210 1-27 (28)
4 2k3c_A TMIX peptide; membrane 1.0 1 1 44.1 -6.0 30 268-298 2-31 (33)
5 2ptm_A Hyperpolarization-activ 1.0 1 1 33.8 6.5 57 731-787 135-191 (198)
6 2kbv_A Sodium/hydrogen exchang 1.0 1 1 32.8 1.0 25 387-411 2-26 (28)
7 3bpz_A Potassium/sodium hyperp 1.0 1 1 32.4 8.2 59 731-789 135-193 (202)
8 3tnp_B CAMP-dependent protein 1.0 1 1 32.2 4.5 109 731-846 212-323 (416)
9 2qcs_B CAMP-dependent protein 1.0 1 1 31.4 7.8 106 733-845 104-212 (291)
10 3of1_A CAMP-dependent protein 1.0 1 1 29.7 7.4 151 691-848 6-183 (246)
No 1
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A
Probab=1.00 E-value=1 Score=119.19 Aligned_cols=274 Identities=12% Similarity=0.151 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHH----HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 889999999999998552895899----99466--899999899999999999999988059996999999872761433
Q 001423 99 DLLLAVFLPALLFESSFAMEVHQI----KRCLV--QMILLAGPGVMISTFFLGAALKLTFPYDWSWKTSLLLGGLLSATD 172 (1079)
Q Consensus 99 elil~ifLp~LLF~aGl~ld~~~l----kr~~~--~IllLAv~gVlitt~ivg~~l~~l~p~~l~l~~aLLLGAIlSaTD 172 (1079)
+++-...+.+++|..|+|+|.+.+ ++..+ .....|+.|++++.++ ++.+ ++....+.--+++..+||
T Consensus 61 ~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~i-----y~~~--~~~~~~~~~gw~ip~ATd 133 (388)
T 1zcd_A 61 LWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALL-----YLAF--NYADPITREGWAIPAATD 133 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHH-----HGGG--CCSSTTHHHHTSSSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHH--HCCCHHHHHHHHHHHHHH
T ss_conf 998657499999999998219984311222456789999999989999999-----9998--148725655569999979
Q ss_pred HHHHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999986429--990178999999999979999999999999804787889999999999999999999999999999
Q 001423 173 PVAVVALLKELG--ASKKLNTIIEGESLMNDGTAIVVYQLFFQMVLGKSFGWGAIIKFLAQVSLGAVGMGLAFGIASVLW 250 (1079)
Q Consensus 173 PvAVvaILkelg--~~~rL~~LIeGESLlNDa~aIVlf~i~l~~~~g~~~s~~~ii~fll~v~iGgi~iGiv~G~l~~~~ 250 (1079)
-+..+.++..++ .|..++..+.+-+.+||..++++..+++. +..++.... . . ++.+.+ ..+
T Consensus 134 IAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt----~~~~~~~l~--------~-~-~~~~~~---~~~ 196 (388)
T 1zcd_A 134 IAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT----NDLSMASLG--------V-A-AVAIAV---LAV 196 (388)
T ss_dssp HHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC----CCCCHHHHH--------H-H-HHHHHH---HHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCHHHHH--------H-H-HHHHHH---HHH
T ss_conf 9999999999974276179999999999999999999987774----875389999--------9-9-999999---999
Q ss_pred HHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HH
Q ss_conf 98771-14259999999999999999997200121278999987640000001332136899999999998778999-88
Q 001423 251 LGFIF-NDTVIEIALTLAVSYIAFFTAQEGADVSGVLTVMTLGMFYAAVARTAFKGESQQSLHYFWEMVAYIANTLI-FI 328 (1079)
Q Consensus 251 l~~i~-~d~~~ei~LtLa~~ylay~iAee~lg~SGVLAvvvaGL~ls~~~r~~~s~~~~~~l~~fwe~ls~iln~li-Fi 328 (1079)
+++.. ++... .+.+ ..+.++.+ +..|.+.++|.|++|++++...+... +..++..+.......+++.|+| |+
T Consensus 197 l~r~~v~~~~~--y~~l--gl~~w~~~-~~sGvHatigg~l~Gl~ip~~~~~~~-~~~~~le~~l~p~v~~~ilPlFaFa 270 (388)
T 1zcd_A 197 LNLCGARRTGV--YILV--GVVLWTAV-LKSGVHATLAGVIVGFFIPLKEKHGR-SPAKRLEHVLHPWVAYLILPLFAFA 270 (388)
T ss_dssp HHHTTCCCTHH--HHHH--HHHHHHHT-TTSHHHHHHHHHHHHHHSCCCGGGSS-CHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHCCHHHHH--HHHH--HHHHHHHH-HHHCCCHHHHHHHHHHHCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98865345899--9999--99999999-98285299999999985467776678-9899999998998999999999998
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCHHHHHHHHH-HHHHHHHH
Q ss_conf 52111200012554100136542899999999999989999998777776415-----8987678999986-44578999
Q 001423 329 LSGVVIAEGILGNDKIFQNHGNSWGYLILLYIFVQVSRLFVVGTLYPVLRNFG-----YGLEWKEAIILVW-SGLRGAVA 402 (1079)
Q Consensus 329 llGl~I~~~vl~~~~~~~~~~~~~~~illl~v~iiv~R~l~v~~l~plL~~~g-----~~ls~ke~~vl~w-gGlRGaVs 402 (1079)
..|+.++....+. ..+ ...+.+.+..++.|+++++....+..+.+ .+.+|++..-+++ +|.+|.++
T Consensus 271 naGv~l~~~~~~~-------l~~-~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L~gigftms 342 (388)
T 1zcd_A 271 NAGVSLQGVTLDG-------LTS-ILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMS 342 (388)
T ss_dssp HCCCCCSSSCCCT-------HHH-HSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHHTTCCHHHH
T ss_pred HCCEEECCCCHHH-------CCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHH
T ss_conf 4582423650664-------117-39999999999999999999999999966676999998999999999824205899
Q ss_pred HHHHHHHH
Q ss_conf 99997420
Q 001423 403 LSLSLSVK 410 (1079)
Q Consensus 403 LaLALsv~ 410 (1079)
+..+..-.
T Consensus 343 L~Ia~laf 350 (388)
T 1zcd_A 343 IFIASLAF 350 (388)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHC
T ss_conf 99999862
No 2
>2l0e_A Sodium/hydrogen exchanger 1; transmembrane helix, membrane protein, NHE1; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=54.16 Aligned_cols=31 Identities=45% Similarity=0.715 Sum_probs=28.3
Q ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
Q ss_conf 6999999872761433999999986429990
Q 001423 157 SWKTSLLLGGLLSATDPVAVVALLKELGASK 187 (1079)
Q Consensus 157 ~l~~aLLLGAIlSaTDPvAVvaILkelg~~~ 187 (1079)
+|..|++||+++|+|||++|.++++++++|+
T Consensus 2 ~~~~~llfGAiis~TDpVavlaif~~~~vp~ 32 (33)
T 2l0e_A 2 KKKDNLLFGSIISAVDPVAVLAVFEEIHKKK 32 (33)
T ss_dssp CCCCCCTTHHHHTTCCHHHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
T ss_conf 6899999987705887599999997738998
No 3
>2htg_A NHE-1, NHE1 isoform of Na+/H+ exchanger 1, solute; membrane protein, transmembrane segment, helix-KINK-helix; NMR {Synthetic}
Probab=1.00 E-value=1 Score=44.97 Aligned_cols=27 Identities=33% Similarity=0.602 Sum_probs=24.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999017899999999997999999999
Q 001423 184 GASKKLNTIIEGESLMNDGTAIVVYQL 210 (1079)
Q Consensus 184 g~~~rL~~LIeGESLlNDa~aIVlf~i 210 (1079)
++|+++..+++|||++||++++|+|..
T Consensus 1 ~V~~~L~~lvfGESllNDavaiVlf~~ 27 (28)
T 2htg_A 1 HINELLHILVFGESLLNDAVTVVLYKK 27 (28)
T ss_dssp CCSSTTHHHHTTTTTTTTTTTTTTTTC
T ss_pred CCCCEEEEEEEEEEEECCCEEEEEEEC
T ss_conf 978638999986412046279999962
No 4
>2k3c_A TMIX peptide; membrane peptide, dodecylphosphocholine micelle, NHE1, Na+/H+ transporter, metal transport; NMR {Synthetic}
Probab=1.00 E-value=1 Score=44.09 Aligned_cols=30 Identities=27% Similarity=0.528 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
Q ss_conf 9999999999720012127899998764000
Q 001423 268 VSYIAFFTAQEGADVSGVLTVMTLGMFYAAV 298 (1079)
Q Consensus 268 ~~ylay~iAee~lg~SGVLAvvvaGL~ls~~ 298 (1079)
+||++|++| |.+|+||++|++++|++++++
T Consensus 2 ~~y~~Yl~A-E~~~lSGIlavv~~Gi~~~~y 31 (33)
T 2k3c_A 2 KSYMAYLSA-ELFHLSGIMALIASGVVMRPK 31 (33)
T ss_dssp CCSTTTGGG-SSSTTTTTTTTTTTTSCCCCC
T ss_pred HHHHHHHHH-HHHCCCHHHHHHHHHHHHHHC
T ss_conf 107999999-882747099999988877521
No 5
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=1.00 E-value=1 Score=33.83 Aligned_cols=57 Identities=14% Similarity=0.213 Sum_probs=47.6
Q ss_pred CCCCCCCCCHHHHHCCCCCCCHHCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 555577541245421897511101221454431023789999821924688888999
Q 001423 731 VFTHGSNLGLYEVLIGKPYMSDMVTDSVVLCFFIESDKILSILRSDPAVEDFLWQQS 787 (1079)
Q Consensus 731 ~f~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~e~~~~~~s 787 (1079)
++..|...|..+++.+.|+.+++.|.+.+.++.|+.+.+..+++.+|++..++++..
T Consensus 135 ~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~~ 191 (198)
T 2ptm_A 135 SLSDGSYFGEICLLTRERRVASVKCETYCTLFSLSVQHFNQVLDEFPAMRKTMEEIA 191 (198)
T ss_dssp EECTTCEESCHHHHHSSCCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHH
T ss_pred EECCCCEECHHHHCCCCCCCEEEEEEEEEEEEEEEHHHHHHHHHHCHHHHHHHHHHH
T ss_conf 846998941188707996010899926889999769999999998959999999999
No 6
>2kbv_A Sodium/hydrogen exchanger 1; transmembrane, peptide, NHE1, micelle, alternative splicing, antiport, glycoprotein, ION transport, membrane; NMR {Synthetic}
Probab=1.00 E-value=1 Score=32.76 Aligned_cols=25 Identities=40% Similarity=0.792 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 7899998644578999999974200
Q 001423 387 KEAIILVWSGLRGAVALSLSLSVKR 411 (1079)
Q Consensus 387 ke~~vl~wgGlRGaVsLaLALsv~~ 411 (1079)
++..+++|+|+||++++++++.++.
T Consensus 2 ~~Q~i~~~~GLRGAvafaL~~~l~~ 26 (28)
T 2kbv_A 2 KDQFIIAYGGLRGAIAFSLGYLLDK 26 (28)
T ss_dssp CHHHHTTTTSSCHHHHHHHHHHHHH
T ss_pred CCEEEEEEECCHHHHHHHHHHHCCC
T ss_conf 7205777503349999999971567
No 7
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=1.00 E-value=1 Score=32.39 Aligned_cols=59 Identities=14% Similarity=0.152 Sum_probs=48.3
Q ss_pred CCCCCCCCCHHHHHCCCCCCCHHCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 55557754124542189751110122145443102378999982192468888899999
Q 001423 731 VFTHGSNLGLYEVLIGKPYMSDMVTDSVVLCFFIESDKILSILRSDPAVEDFLWQQSAI 789 (1079)
Q Consensus 731 ~f~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~e~~~~~~s~~ 789 (1079)
++..|...|..+++.+.|+.+++.|.+.+.++.|+.+.+..+++.+|++...+.+.-.-
T Consensus 135 ~l~~G~~fGe~~~~~~~~~~~~v~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~~~~ 193 (202)
T 3bpz_A 135 KLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAID 193 (202)
T ss_dssp EEETTCEECHHHHHHCSBCSSEEEESSCEEEEEEEHHHHHHHHHHSGGGHHHHHHHHHH
T ss_pred EECCCCEECCHHHHCCCCCCCEEEEEEEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 97189984328984699846289985588999988999999999897999999999999
No 8
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=1.00 E-value=1 Score=32.22 Aligned_cols=109 Identities=10% Similarity=0.121 Sum_probs=78.8
Q ss_pred CCCCCCCCCHHHHHCCCCCCCHHCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55557754124542189751110122145443102378999982192468888899999999852335765432567899
Q 001423 731 VFTHGSNLGLYEVLIGKPYMSDMVTDSVVLCFFIESDKILSILRSDPAVEDFLWQQSAIALSRILLPQIFEKLTMQDMRA 810 (1079)
Q Consensus 731 ~f~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~e~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 810 (1079)
++..|...|-..++.+.|+-++++|.+-+.++.|+.+.++.+++.++.+....+.+-. .+ -..|..++..++..
T Consensus 212 ~l~~G~~fGe~all~~~pr~atv~A~~d~~l~~i~r~~f~~ll~~~~~~~~~~~~~~L---~~---v~lf~~Ls~~el~~ 285 (416)
T 3tnp_B 212 NYDNRGSFGELALMYNTPKAATITATSPGALWGLDRVTFRRIIVKNNAKKRKMYESFI---ES---LPFLKSLEVSERLK 285 (416)
T ss_dssp EEESCCEECGGGGTSCCCCSSEEEESSSEEEEEEEHHHHHHHHHHHHHHHSSSSSSSG---GG---CGGGTTCCHHHHHH
T ss_pred EECCCCEEEEHHHHCCCCCCCEEEECCCEEEEEEEEHHHHHHHHCCHHHHHHHHHHHH---HH---CHHHHCCCHHHHHH
T ss_conf 9559988863787369985657997567599999512223443001047899999998---52---45755299999999
Q ss_pred HHHHCCCCEEEECCEEEEEE---CCCEEEEEEEEEECCC
Q ss_conf 87402330122021189840---5852598853441257
Q 001423 811 LIAERSKMTTCLRGEIIEIP---YHCIGFLLEGFIKTHG 846 (1079)
Q Consensus 811 l~~~~~~~~~~~~~~~~~~~---~~~~g~l~~g~~~~~~ 846 (1079)
+. ...+...|.+|+.|--+ .....++++|.++-..
T Consensus 286 L~-~~l~~~~~~~Ge~I~~eGd~~~~~yiI~sG~v~v~~ 323 (416)
T 3tnp_B 286 VV-DVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITM 323 (416)
T ss_dssp HH-HHCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEC
T ss_pred HH-HHCEEEEECCCCEEEECCCCCCEEEEEEECEEEEEE
T ss_conf 98-660699978999999389738889999949899999
No 9
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=1.00 E-value=1 Score=31.44 Aligned_cols=106 Identities=17% Similarity=0.222 Sum_probs=79.7
Q ss_pred CCCCCCCHHHHHCCCCCCCHHCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55775412454218975111012214544310237899998219246888889999999985233576543256789987
Q 001423 733 THGSNLGLYEVLIGKPYMSDMVTDSVVLCFFIESDKILSILRSDPAVEDFLWQQSAIALSRILLPQIFEKLTMQDMRALI 812 (1079)
Q Consensus 733 ~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~e~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~ 812 (1079)
..|...|-..++.+.|+-++++|.+-+.++.|+.+.+..+++.+|.+...++++-. .++ ..|..++...+..+.
T Consensus 104 ~~G~~fGe~~l~~~~~~~~tv~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l---~~~---~lf~~l~~~~~~~l~ 177 (291)
T 2qcs_B 104 GEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKRKMYEEFL---SKV---SILESLDKWERLTVA 177 (291)
T ss_dssp CTTCEECGGGGTCCCBCSSEEEESSCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH---HTC---GGGTTCCHHHHHHHH
T ss_pred CCCCCCCHHHHHCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH---HHC---HHHHHCCHHHHHHHH
T ss_conf 89982136787169798608998987799998769989987545777789999998---515---576648999999997
Q ss_pred HHCCCCEEEECCEEEEEEC---CCEEEEEEEEEECC
Q ss_conf 4023301220211898405---85259885344125
Q 001423 813 AERSKMTTCLRGEIIEIPY---HCIGFLLEGFIKTH 845 (1079)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~---~~~g~l~~g~~~~~ 845 (1079)
...+...|.+|+.|--+. ...-++++|.++-.
T Consensus 178 -~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~ 212 (291)
T 2qcs_B 178 -DALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVL 212 (291)
T ss_dssp -HHCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEE
T ss_pred -HHCEEEEECCCCEEEECCCCCCEEEEEEECEEEEE
T ss_conf -66089997899999969954787999996989999
No 10
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=29.69 Aligned_cols=151 Identities=14% Similarity=0.095 Sum_probs=99.6
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC------------------------CCCCCCCCCCCCCHHHHHCC
Q ss_conf 999999987276687989979998123531222322------------------------33775555775412454218
Q 001423 691 IDYIQNLEKVGLLEEKEMLHLHDAVQWTSKSIRNKH------------------------SLHPVFTHGSNLGLYEVLIG 746 (1079)
Q Consensus 691 ~~~I~~l~~~G~ldekE~~~l~~~V~w~~~~~~~~~------------------------~~~p~f~~g~~~~~~~~l~~ 746 (1079)
.+.+++..--..+++.+...+.+..+...-.-+... ....++..|...|-..++.+
T Consensus 6 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~~~~~~~~~~~g~~fGe~~l~~~ 85 (246)
T 3of1_A 6 EKSIRNNFLFNKLDSDSKRLVINCLEEKSVPKGATIIKQGDQGDYFYVVEKGTVDFYVNDNKVNSSGPGSSFGELALMYN 85 (246)
T ss_dssp HHHHHTCTTTTTSCHHHHHHHHTTCEEEEECTTCEEECTTCCCCEEEEEEECCEEEESTTSCCEEECTTCEECHHHHHHT
T ss_pred HHHHHCCHHHHHCCHHHHHHHHHHHCEEEECCCCEEEECCCCCCEEEEEEEEEEEEEECCEEEEECCCCCEEEHHHHHCC
T ss_conf 99985487667399999999998502699899999993688897799998358999999999986389982465577559
Q ss_pred CCCCCHHCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEE
Q ss_conf 97511101221454431023789999821924688888999999998523357654325678998740233012202118
Q 001423 747 KPYMSDMVTDSVVLCFFIESDKILSILRSDPAVEDFLWQQSAIALSRILLPQIFEKLTMQDMRALIAERSKMTTCLRGEI 826 (1079)
Q Consensus 747 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~e~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 826 (1079)
.|+-++++|.+-+.++.|+.+.++.+++.+|......+.+-. .+ -..|..++..+++.+. ...+...|.+|+.
T Consensus 86 ~~~~~tv~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l---~~---~~~f~~l~~~~l~~l~-~~~~~~~~~~g~~ 158 (246)
T 3of1_A 86 SPRAATVVATSDCLLWALDRLTFRKILLGSSFKKRLMYDDLL---KS---MPVLKSLTTYDRAKLA-DALDTKIYQPGET 158 (246)
T ss_dssp CCCSSEEEESSCEEEEEEEHHHHHHTTTTTTSHHHHHSHHHH---HH---CGGGTTCCHHHHHHHH-HTCEEEEECTTCE
T ss_pred CCCCCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH---HH---CHHHHCCCHHHHHHHH-HHHHEEEECCCCE
T ss_conf 898748998887699998739999999876899999999998---62---9565339999999999-8621378389999
Q ss_pred EEEE---CCCEEEEEEEEEECCCCC
Q ss_conf 9840---585259885344125754
Q 001423 827 IEIP---YHCIGFLLEGFIKTHGLQ 848 (1079)
Q Consensus 827 ~~~~---~~~~g~l~~g~~~~~~~~ 848 (1079)
|--+ .....++.+|.++-....
T Consensus 159 i~~~g~~~~~~y~I~~G~v~v~~~~ 183 (246)
T 3of1_A 159 IIREGDQGENFYLIEYGAVDVSKKG 183 (246)
T ss_dssp EECTTSBCCEEEEEEECEEEEEETT
T ss_pred EEECCCCCCEEEEEEECEEEEEECC
T ss_conf 9958994877999990589999869
Done!