BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001426
(1079 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 194 bits (494), Expect = 1e-49, Method: Composition-based stats.
Identities = 119/285 (41%), Positives = 169/285 (59%), Gaps = 17/285 (5%)
Query: 760 LSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWP--VKNGELPERDQFSAEVQTLGSIRHK 817
S+ NI+G+G G VY+ + ++AVK+L + GEL QF EV+ + H+
Sbjct: 40 FSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL----QFQTEVEMISMAVHR 95
Query: 818 NIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEK---KVFLDWDSRYKIILGVAHGLAYL 874
N++RL G C RLL++ Y++NGS+A L E+ + LDW R +I LG A GLAYL
Sbjct: 96 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYL 155
Query: 875 HHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY 934
H C P IIHRD+K+ NIL+ +FEA + DFGLAKL G+IAPEY
Sbjct: 156 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTI-GHIAPEY 214
Query: 935 GYSLKITEKSDVYSYGVVLLEVLTGKEPTD-SRIP--DGAHIITWVNGELRERKREFTTI 991
+ K +EK+DV+ YGV+LLE++TG+ D +R+ D ++ WV G L+E+K E
Sbjct: 215 LSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVD 274
Query: 992 LDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLK 1036
+D Q + +E+ Q++ VALLC P ERP M +V ML+
Sbjct: 275 VDLQ----GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant
Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 193 bits (491), Expect = 4e-49, Method: Composition-based stats.
Identities = 119/283 (42%), Positives = 169/283 (59%), Gaps = 17/283 (6%)
Query: 762 DTNIVGKGVSGIVYRVEIPSRQVIAVKKLWP--VKNGELPERDQFSAEVQTLGSIRHKNI 819
+ NI+G+G G VY+ + ++AVK+L + GEL QF EV+ + H+N+
Sbjct: 34 NKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL----QFQTEVEMISMAVHRNL 89
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEK---KVFLDWDSRYKIILGVAHGLAYLHH 876
+RL G C RLL++ Y++NGS+A L E+ + LDW R +I LG A GLAYLH
Sbjct: 90 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD 149
Query: 877 DCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGY 936
C P IIHRD+K+ NIL+ +FEA + DFGLAKL G+IAPEY
Sbjct: 150 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI-GHIAPEYLS 208
Query: 937 SLKITEKSDVYSYGVVLLEVLTGKEPTD-SRIP--DGAHIITWVNGELRERKREFTTILD 993
+ K +EK+DV+ YGV+LLE++TG+ D +R+ D ++ WV G L+E+K E +D
Sbjct: 209 TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVD 268
Query: 994 RQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLK 1036
Q + +E+ Q++ VALLC P ERP M +V ML+
Sbjct: 269 LQ----GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 187/643 (29%), Positives = 277/643 (43%), Gaps = 75/643 (11%)
Query: 63 IKCSRT----EIAITSIHIPTSFPYQLLSFSHLTSLVLSNANLT--GEIPPAIGNLSSLI 116
KCS + +++ S+ P + L S S L L +S+ L G++ + L+SL
Sbjct: 93 FKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLE 151
Query: 117 NLDLSFNALTGN------IPEEIGKLAXXXXXXXXXXXIHGGIPREIGNCSKLRRLELYD 170
LDLS N+++G + + G+L I G + ++ C L L++
Sbjct: 152 VLDLSANSISGANVVGWVLSDGCGELKHLAISGNK---ISGDV--DVSRCVNLEFLDVSS 206
Query: 171 NQLSGNIPAEIGQLEALEIIRAGGNPGIHGEIPEEISNCKVLVFLGLADTGISGQIPRSV 230
N S IP +G AL+ + GN + G+ IS C L L ++ G IP
Sbjct: 207 NNFSTGIPF-LGDCSALQHLDISGNK-LSGDFSRAISTCTELKLLNISSNQFVGPIPPL- 263
Query: 231 GELTNLRTLSVYTANITGYIPEEI-GNCSALENLFLYENQIFGKIPDEXXXXXXXXXXXX 289
L +L+ LS+ TG IP+ + G C L L L N +G +P
Sbjct: 264 -PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLAL 322
Query: 290 XXXXXSGSIP-EALGNCSSLTVIDVSLNSLGGEVPXXXXXXXXXXXXXX-XXXNISGEI- 346
SG +P + L L V+D+S N GE+P N SG I
Sbjct: 323 SSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPIL 382
Query: 347 PSFFGN-FSRLKQLELDNNRFFGQIPPTIGQLKELLLFFAWQNQLHGNIPE-LAYCVKLQ 404
P+ N + L++L L NN F G+IPPT+ EL+ N L G IP L KL+
Sbjct: 383 PNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLR 442
Query: 405 ALDLSHNFLTGSVPSSXXXXXXXXXXXXXXXRFSGEIPPEIGGCTGLIRLRLGSNNFSGH 464
L L N L G +P +GEIP + CT L + L +N +G
Sbjct: 443 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 502
Query: 465 IPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQLEMVDLHQNKLQGTIPSSL------- 517
IP IG L L L+LS N F+G IP E+G+C L +DL+ N GTIP+++
Sbjct: 503 IPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKI 562
Query: 518 --EFLFGLNVLDLSMNSIG-------------GTIPENLGKLTSLNK------------- 549
F+ G + + + + G E L +L++ N
Sbjct: 563 AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 622
Query: 550 -----------LVLSKNNITGLIPXXXXXXXXXXXXXXXXNRINGSIPEEIGRLQGLDIL 598
L +S N ++G IP N I+GSIP+E+G L+GL+IL
Sbjct: 623 PTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNIL 682
Query: 599 LNLSWNALTGPIPESFSNLSKLANLDLSNNMLTGSLKVLGSLD 641
+LS N L G IP++ S L+ L +DLSNN L+G + +G +
Sbjct: 683 -DLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFE 724
Score = 166 bits (421), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 158/531 (29%), Positives = 235/531 (44%), Gaps = 33/531 (6%)
Query: 61 DYIKCSRTE-IAITSIHIPTSFPYQLLSFSHLTSLVLSNANLTGEIPPAIGNLSSLINLD 119
D +C E + ++S + T P+ L S L L +S L+G+ AI + L L+
Sbjct: 192 DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLN 250
Query: 120 LSFNALTGNIPEEIGKLAXXXXXXXXXXXIHGGIPREI-GNCSKLRRLELYDNQLSGNIP 178
+S N G IP L G IP + G C L L+L N G +P
Sbjct: 251 ISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 308
Query: 179 AEIGQLEALEIIRAGGNPGIHGEIP-EEISNCKVLVFLGLADTGISGQIPRSVGELT-NL 236
G LE + N GE+P + + + L L L+ SG++P S+ L+ +L
Sbjct: 309 PFFGSCSLLESLALSSN-NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASL 367
Query: 237 RTLSVYTANITGYI-PEEIGN-CSALENLFLYENQIFGKIPDEXXXXXXXXXXXXXXXXX 294
TL + + N +G I P N + L+ L+L N GKIP
Sbjct: 368 LTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYL 427
Query: 295 SGSIPEALGNCSSLTVIDVSLNSLGGEVPXXXXXXXXXXXXXXXXXNISGEIPSFFGNFS 354
SG+IP +LG+ S L + + LN L GE+P +++GEIPS N +
Sbjct: 428 SGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT 487
Query: 355 RLKQLELDNNRFFGQIPPTIGQLKELLLFFAWQNQLHGNIP-ELAYCVKLQALDLSHNFL 413
L + L NNR G+IP IG+L+ L + N GNIP EL C L LDL+ N
Sbjct: 488 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 547
Query: 414 TGSVPSSXXXXXXXXXXXXXXXRF-----SGEIPPEIGGCTGLIRL---------RLGSN 459
G++P++ + + + E G L+ RL +
Sbjct: 548 NGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTR 607
Query: 460 N--------FSGHIPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQLEMVDLHQNKLQG 511
N + GH + FL++S N +G IP EIG+ L +++L N + G
Sbjct: 608 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 667
Query: 512 TIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNITGLIP 562
+IP + L GLN+LDLS N + G IP+ + LT L ++ LS NN++G IP
Sbjct: 668 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 149 bits (377), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 180/698 (25%), Positives = 275/698 (39%), Gaps = 151/698 (21%)
Query: 54 HRNPCNWDYIKCSRTEIAITSIHIPTSFPYQLLSFSHLTSL----------VLSNANLTG 103
++NPC +D + C ++ TSI + +S P + FS ++S LSN+++ G
Sbjct: 33 NKNPCTFDGVTCRDDKV--TSIDL-SSKPLNV-GFSAVSSSLLSLTGLESLFLSNSHING 88
Query: 104 EIPPAIGNLSSLINLDLSFNALTGNIPEEIGKLAXXXXXXXXXXXIHGGIPREIGNCSKL 163
+ +SL +LDLS N+L+G + +G+CS L
Sbjct: 89 SVS-GFKCSASLTSLDLSRNSLSGPVTTLT----------------------SLGSCSGL 125
Query: 164 RRLELYDNQLSGNIPAEIG---QLEALEIIRAGGNPGIHGEIPEEI--SNCKVLVFLGLA 218
+ L + N L + P ++ +L +LE++ N + + C L L ++
Sbjct: 126 KFLNVSSNTL--DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAIS 183
Query: 219 DTGISGQIPRSVGELTNLRTLSVYTANITGYIPEEIGNCSALENLFLYENQIFGKIPDEX 278
ISG + V NL L V + N + IP +G+CSAL++L + N++
Sbjct: 184 GNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKL-------- 232
Query: 279 XXXXXXXXXXXXXXXXSGSIPEALGNCSSLTVIDVSLNSLGGEVPXXXXXXXXXXXXXXX 338
SG A+ C+ L ++++S N G +P
Sbjct: 233 ----------------SGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAEN 276
Query: 339 XXNISGEIPSFF-GNFSRLKQLELDNNRFFGQIPPTIGQLKELLLFFAWQNQLHGNIP-- 395
+GEIP F G L L+L N F+G +PP G L N G +P
Sbjct: 277 --KFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD 334
Query: 396 ELAYCVKLQALDLSHNFLTGSVPSSXXXXXXXXXXXXXXXR------------------- 436
L L+ LDLS N +G +P S
Sbjct: 335 TLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 394
Query: 437 --------FSGEIPPEIGGCTGLIRLRLGSNNFSGHIPSRIGLLHRLTFLELSENQFTGE 488
F+G+IPP + C+ L+ L L N SG IPS +G L +L L+L N GE
Sbjct: 395 ELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGE 454
Query: 489 IPPEIGNCTQLEMVDLHQNKLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLN 548
IP E+ LE + L N L G IPS L LN + LS N + G IP+ +G+L +L
Sbjct: 455 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 514
Query: 549 KLVLSKNNITGLIPXXXXXXXXXXXXXXXXNRINGSIP---------------------- 586
L LS N+ +G IP N NG+IP
Sbjct: 515 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVY 574
Query: 587 ------------------------EEIGRLQGLDILLNLSWNALTGPIPESFSNLSKLAN 622
E++ RL + N++ G +F N +
Sbjct: 575 IKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNP-CNITSRVYGGHTSPTFDNNGSMMF 633
Query: 623 LDLSNNMLTGSL-KVLGSLDNLVSLNVSYNHFSGILPN 659
LD+S NML+G + K +GS+ L LN+ +N SG +P+
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 671
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 158/375 (42%), Gaps = 57/375 (15%)
Query: 306 SSLTVIDVSLNSLGGEVPXXXXXXXXXXXXXXXXXNISGEIPSFFGNFS------RLKQL 359
+SLT +D+S NSL G V N+S F G S L+ L
Sbjct: 97 ASLTSLDLSRNSLSGPV---TTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVL 153
Query: 360 ELDNNRFFGQ------IPPTIGQLKELLLFFAWQNQLHGNIPELAYCVKLQALDLSHNFL 413
+L N G + G+LK L + N++ G++ +++ CV L+ LD+S N
Sbjct: 154 DLSANSISGANVVGWVLSDGCGELKHLAI---SGNKISGDV-DVSRCVNLEFLDVSSN-- 207
Query: 414 TGSVPSSXXXXXXXXXXXXXXXRFSGEIPPEIGGCTGLIRLRLGSNNFSGHIPSRIGLLH 473
FS IP +G C+ L L + N SG I
Sbjct: 208 ----------------------NFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCT 244
Query: 474 RLTFLELSENQFTGEIPPEIGNCTQLEMVDLHQNKLQGTIPSSLEFLFG----LNVLDLS 529
L L +S NQF G IPP L+ + L +NK G IP +FL G L LDLS
Sbjct: 245 ELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIP---DFLSGACDTLTGLDLS 299
Query: 530 MNSIGGTIPENLGKLTSLNKLVLSKNNITGLIPXXXXXXXX-XXXXXXXXNRINGSIPEE 588
N G +P G + L L LS NN +G +P N +G +PE
Sbjct: 300 GNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPES 359
Query: 589 IGRLQGLDILLNLSWNALTGPIPESFSNLSK--LANLDLSNNMLTGSLK-VLGSLDNLVS 645
+ L + L+LS N +GPI + K L L L NN TG + L + LVS
Sbjct: 360 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVS 419
Query: 646 LNVSYNHFSGILPNT 660
L++S+N+ SG +P++
Sbjct: 420 LHLSFNYLSGTIPSS 434
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 187/643 (29%), Positives = 277/643 (43%), Gaps = 75/643 (11%)
Query: 63 IKCSRT----EIAITSIHIPTSFPYQLLSFSHLTSLVLSNANLT--GEIPPAIGNLSSLI 116
KCS + +++ S+ P + L S S L L +S+ L G++ + L+SL
Sbjct: 96 FKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLE 154
Query: 117 NLDLSFNALTGN------IPEEIGKLAXXXXXXXXXXXIHGGIPREIGNCSKLRRLELYD 170
LDLS N+++G + + G+L I G + ++ C L L++
Sbjct: 155 VLDLSANSISGANVVGWVLSDGCGELKHLAISGNK---ISGDV--DVSRCVNLEFLDVSS 209
Query: 171 NQLSGNIPAEIGQLEALEIIRAGGNPGIHGEIPEEISNCKVLVFLGLADTGISGQIPRSV 230
N S IP +G AL+ + GN + G+ IS C L L ++ G IP
Sbjct: 210 NNFSTGIPF-LGDCSALQHLDISGNK-LSGDFSRAISTCTELKLLNISSNQFVGPIPPL- 266
Query: 231 GELTNLRTLSVYTANITGYIPEEI-GNCSALENLFLYENQIFGKIPDEXXXXXXXXXXXX 289
L +L+ LS+ TG IP+ + G C L L L N +G +P
Sbjct: 267 -PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLAL 325
Query: 290 XXXXXSGSIP-EALGNCSSLTVIDVSLNSLGGEVPXXXXXXXXXXXXXX-XXXNISGEI- 346
SG +P + L L V+D+S N GE+P N SG I
Sbjct: 326 SSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPIL 385
Query: 347 PSFFGN-FSRLKQLELDNNRFFGQIPPTIGQLKELLLFFAWQNQLHGNIPE-LAYCVKLQ 404
P+ N + L++L L NN F G+IPPT+ EL+ N L G IP L KL+
Sbjct: 386 PNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLR 445
Query: 405 ALDLSHNFLTGSVPSSXXXXXXXXXXXXXXXRFSGEIPPEIGGCTGLIRLRLGSNNFSGH 464
L L N L G +P +GEIP + CT L + L +N +G
Sbjct: 446 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 505
Query: 465 IPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQLEMVDLHQNKLQGTIPSSL------- 517
IP IG L L L+LS N F+G IP E+G+C L +DL+ N GTIP+++
Sbjct: 506 IPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKI 565
Query: 518 --EFLFGLNVLDLSMNSIG-------------GTIPENLGKLTSLNK------------- 549
F+ G + + + + G E L +L++ N
Sbjct: 566 AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 625
Query: 550 -----------LVLSKNNITGLIPXXXXXXXXXXXXXXXXNRINGSIPEEIGRLQGLDIL 598
L +S N ++G IP N I+GSIP+E+G L+GL+IL
Sbjct: 626 PTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNIL 685
Query: 599 LNLSWNALTGPIPESFSNLSKLANLDLSNNMLTGSLKVLGSLD 641
+LS N L G IP++ S L+ L +DLSNN L+G + +G +
Sbjct: 686 -DLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFE 727
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 158/531 (29%), Positives = 235/531 (44%), Gaps = 33/531 (6%)
Query: 61 DYIKCSRTE-IAITSIHIPTSFPYQLLSFSHLTSLVLSNANLTGEIPPAIGNLSSLINLD 119
D +C E + ++S + T P+ L S L L +S L+G+ AI + L L+
Sbjct: 195 DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLN 253
Query: 120 LSFNALTGNIPEEIGKLAXXXXXXXXXXXIHGGIPREI-GNCSKLRRLELYDNQLSGNIP 178
+S N G IP L G IP + G C L L+L N G +P
Sbjct: 254 ISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311
Query: 179 AEIGQLEALEIIRAGGNPGIHGEIP-EEISNCKVLVFLGLADTGISGQIPRSVGELT-NL 236
G LE + N GE+P + + + L L L+ SG++P S+ L+ +L
Sbjct: 312 PFFGSCSLLESLALSSN-NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASL 370
Query: 237 RTLSVYTANITGYI-PEEIGN-CSALENLFLYENQIFGKIPDEXXXXXXXXXXXXXXXXX 294
TL + + N +G I P N + L+ L+L N GKIP
Sbjct: 371 LTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYL 430
Query: 295 SGSIPEALGNCSSLTVIDVSLNSLGGEVPXXXXXXXXXXXXXXXXXNISGEIPSFFGNFS 354
SG+IP +LG+ S L + + LN L GE+P +++GEIPS N +
Sbjct: 431 SGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT 490
Query: 355 RLKQLELDNNRFFGQIPPTIGQLKELLLFFAWQNQLHGNIP-ELAYCVKLQALDLSHNFL 413
L + L NNR G+IP IG+L+ L + N GNIP EL C L LDL+ N
Sbjct: 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 550
Query: 414 TGSVPSSXXXXXXXXXXXXXXXRF-----SGEIPPEIGGCTGLIRL---------RLGSN 459
G++P++ + + + E G L+ RL +
Sbjct: 551 NGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTR 610
Query: 460 N--------FSGHIPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQLEMVDLHQNKLQG 511
N + GH + FL++S N +G IP EIG+ L +++L N + G
Sbjct: 611 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 670
Query: 512 TIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNITGLIP 562
+IP + L GLN+LDLS N + G IP+ + LT L ++ LS NN++G IP
Sbjct: 671 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 149 bits (377), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 180/698 (25%), Positives = 275/698 (39%), Gaps = 151/698 (21%)
Query: 54 HRNPCNWDYIKCSRTEIAITSIHIPTSFPYQLLSFSHLTSL----------VLSNANLTG 103
++NPC +D + C ++ TSI + +S P + FS ++S LSN+++ G
Sbjct: 36 NKNPCTFDGVTCRDDKV--TSIDL-SSKPLNV-GFSAVSSSLLSLTGLESLFLSNSHING 91
Query: 104 EIPPAIGNLSSLINLDLSFNALTGNIPEEIGKLAXXXXXXXXXXXIHGGIPREIGNCSKL 163
+ +SL +LDLS N+L+G + +G+CS L
Sbjct: 92 SVS-GFKCSASLTSLDLSRNSLSGPVTTLT----------------------SLGSCSGL 128
Query: 164 RRLELYDNQLSGNIPAEIG---QLEALEIIRAGGNPGIHGEIPEEI--SNCKVLVFLGLA 218
+ L + N L + P ++ +L +LE++ N + + C L L ++
Sbjct: 129 KFLNVSSNTL--DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAIS 186
Query: 219 DTGISGQIPRSVGELTNLRTLSVYTANITGYIPEEIGNCSALENLFLYENQIFGKIPDEX 278
ISG + V NL L V + N + IP +G+CSAL++L + N++
Sbjct: 187 GNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKL-------- 235
Query: 279 XXXXXXXXXXXXXXXXSGSIPEALGNCSSLTVIDVSLNSLGGEVPXXXXXXXXXXXXXXX 338
SG A+ C+ L ++++S N G +P
Sbjct: 236 ----------------SGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAEN 279
Query: 339 XXNISGEIPSFF-GNFSRLKQLELDNNRFFGQIPPTIGQLKELLLFFAWQNQLHGNIP-- 395
+GEIP F G L L+L N F+G +PP G L N G +P
Sbjct: 280 --KFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD 337
Query: 396 ELAYCVKLQALDLSHNFLTGSVPSSXXXXXXXXXXXXXXXR------------------- 436
L L+ LDLS N +G +P S
Sbjct: 338 TLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397
Query: 437 --------FSGEIPPEIGGCTGLIRLRLGSNNFSGHIPSRIGLLHRLTFLELSENQFTGE 488
F+G+IPP + C+ L+ L L N SG IPS +G L +L L+L N GE
Sbjct: 398 ELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGE 457
Query: 489 IPPEIGNCTQLEMVDLHQNKLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLN 548
IP E+ LE + L N L G IPS L LN + LS N + G IP+ +G+L +L
Sbjct: 458 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 517
Query: 549 KLVLSKNNITGLIPXXXXXXXXXXXXXXXXNRINGSIP---------------------- 586
L LS N+ +G IP N NG+IP
Sbjct: 518 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVY 577
Query: 587 ------------------------EEIGRLQGLDILLNLSWNALTGPIPESFSNLSKLAN 622
E++ RL + N++ G +F N +
Sbjct: 578 IKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNP-CNITSRVYGGHTSPTFDNNGSMMF 636
Query: 623 LDLSNNMLTGSL-KVLGSLDNLVSLNVSYNHFSGILPN 659
LD+S NML+G + K +GS+ L LN+ +N SG +P+
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 674
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 158/375 (42%), Gaps = 57/375 (15%)
Query: 306 SSLTVIDVSLNSLGGEVPXXXXXXXXXXXXXXXXXNISGEIPSFFGNFS------RLKQL 359
+SLT +D+S NSL G V N+S F G S L+ L
Sbjct: 100 ASLTSLDLSRNSLSGPV---TTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVL 156
Query: 360 ELDNNRFFGQ------IPPTIGQLKELLLFFAWQNQLHGNIPELAYCVKLQALDLSHNFL 413
+L N G + G+LK L + N++ G++ +++ CV L+ LD+S N
Sbjct: 157 DLSANSISGANVVGWVLSDGCGELKHLAI---SGNKISGDV-DVSRCVNLEFLDVSSN-- 210
Query: 414 TGSVPSSXXXXXXXXXXXXXXXRFSGEIPPEIGGCTGLIRLRLGSNNFSGHIPSRIGLLH 473
FS IP +G C+ L L + N SG I
Sbjct: 211 ----------------------NFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCT 247
Query: 474 RLTFLELSENQFTGEIPPEIGNCTQLEMVDLHQNKLQGTIPSSLEFLFG----LNVLDLS 529
L L +S NQF G IPP L+ + L +NK G IP +FL G L LDLS
Sbjct: 248 ELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIP---DFLSGACDTLTGLDLS 302
Query: 530 MNSIGGTIPENLGKLTSLNKLVLSKNNITGLIPXXXXXXXX-XXXXXXXXNRINGSIPEE 588
N G +P G + L L LS NN +G +P N +G +PE
Sbjct: 303 GNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPES 362
Query: 589 IGRLQGLDILLNLSWNALTGPIPESFSNLSK--LANLDLSNNMLTGSLK-VLGSLDNLVS 645
+ L + L+LS N +GPI + K L L L NN TG + L + LVS
Sbjct: 363 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVS 422
Query: 646 LNVSYNHFSGILPNT 660
L++S+N+ SG +P++
Sbjct: 423 LHLSFNYLSGTIPSS 437
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 148/279 (53%), Gaps = 15/279 (5%)
Query: 764 NIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPE-RDQFSAEVQTLGSIRHKNIVRL 822
N +G+G G+VY+ + + +AVKKL + + E + QF E++ + +H+N+V L
Sbjct: 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLH--EKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
LG ++G L++ Y+ NGSL L + L W R KI G A+G+ +LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN--- 152
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IHRDIKS NIL+ F A ++DFGLA+ Y+APE +I
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEI 211
Query: 941 TEKSDVYSYGVVLLEVLTGKEPTDS-RIPDGAHIITWVNGELRERKREFTTILDRQLLMR 999
T KSD+YS+GVVLLE++TG D R P ++ + E+ + ++ +D+++
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAVDEHREP---QLLLDIKEEIEDEEKTIEDYIDKKMNDA 268
Query: 1000 SGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
T ++ M VA C++ +RP +K V +L+E+
Sbjct: 269 DSTSVEAM---YSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 149/279 (53%), Gaps = 15/279 (5%)
Query: 764 NIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPE-RDQFSAEVQTLGSIRHKNIVRL 822
N +G+G G+VY+ + + +AVKKL + + E + QF E++ + +H+N+V L
Sbjct: 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLH--EKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
LG ++G L++ Y+ NGSL L + L W R KI G A+G+ +LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN--- 152
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IHRDIKS NIL+ F A ++DFGLA+ Y+APE +I
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEI 211
Query: 941 TEKSDVYSYGVVLLEVLTGKEPTDS-RIPDGAHIITWVNGELRERKREFTTILDRQLLMR 999
T KSD+YS+GVVLLE++TG D R P ++ + E+ + ++ +D+++
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAVDEHREP---QLLLDIKEEIEDEEKTIEDYIDKKMNDA 268
Query: 1000 SGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
T ++ M VA C++ +RP +K V +L+E+
Sbjct: 269 DSTSVEAM---YSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 150/279 (53%), Gaps = 15/279 (5%)
Query: 764 NIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPE-RDQFSAEVQTLGSIRHKNIVRL 822
N +G+G G+VY+ + + +AVKKL + + E + QF E++ + +H+N+V L
Sbjct: 31 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLH--EKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
LG ++G L++ Y+ NGSL L + L W R KI G A+G+ +LH +
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN--- 146
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IHRDIKS NIL+ F A ++DFGLA+ Y+APE +I
Sbjct: 147 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEI 205
Query: 941 TEKSDVYSYGVVLLEVLTGKEPTDS-RIPDGAHIITWVNGELRERKREFTTILDRQLLMR 999
T KSD+YS+GVVLLE++TG D R P ++ + E+ + ++ +D+++
Sbjct: 206 TPKSDIYSFGVVLLEIITGLPAVDEHREP---QLLLDIKEEIEDEEKTIEDYIDKKMNDA 262
Query: 1000 SGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
T ++ M VA C++ +RP +K V +L+E+
Sbjct: 263 DSTSVEAM---YSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 144/287 (50%), Gaps = 36/287 (12%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQ----FSAEVQTLGSIRHKNIV 820
++G GV G VY+ + +A+K+ PE Q F E++TL RH ++V
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKR-------RTPESSQGIEEFETEIETLSFCRHPHLV 98
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK---VFLDWDSRYKIILGVAHGLAYLHHD 877
L+G C+ +L++ Y+ NG+L L+ + + W+ R +I +G A GL YLH
Sbjct: 99 SLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH-- 156
Query: 878 CVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYS 937
IIHRD+KS NIL+ F + DFG++K GYI PEY
Sbjct: 157 -TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIK 215
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEPTDSRIP-DGAHIITWV-----NGELRERKREFTTI 991
++TEKSDVYS+GVVL EVL + +P + ++ W NG+L + I
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ-------I 268
Query: 992 LDRQLLMRSGTQIQ-EMLQVLG-VALLCVNPCPEERPTMKDVTAMLK 1036
+D L +I+ E L+ G A+ C+ E+RP+M DV L+
Sbjct: 269 VDPNL----ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 144/287 (50%), Gaps = 36/287 (12%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQ----FSAEVQTLGSIRHKNIV 820
++G GV G VY+ + +A+K+ PE Q F E++TL RH ++V
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKR-------RTPESSQGIEEFETEIETLSFCRHPHLV 98
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK---VFLDWDSRYKIILGVAHGLAYLHHD 877
L+G C+ +L++ Y+ NG+L L+ + + W+ R +I +G A GL YLH
Sbjct: 99 SLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH-- 156
Query: 878 CVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYS 937
IIHRD+KS NIL+ F + DFG++K GYI PEY
Sbjct: 157 -TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIK 215
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEPTDSRIP-DGAHIITWV-----NGELRERKREFTTI 991
++TEKSDVYS+GVVL EVL + +P + ++ W NG+L + I
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ-------I 268
Query: 992 LDRQLLMRSGTQIQ-EMLQVLG-VALLCVNPCPEERPTMKDVTAMLK 1036
+D L +I+ E L+ G A+ C+ E+RP+M DV L+
Sbjct: 269 VDPNL----ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 143/278 (51%), Gaps = 15/278 (5%)
Query: 764 NIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPE-RDQFSAEVQTLGSIRHKNIVRL 822
N G+G G+VY+ + + +AVKKL + + E + QF E++ +H+N+V L
Sbjct: 28 NKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLH--EKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
LG ++G L++ Y NGSL L + L W R KI G A+G+ +LH +
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHEN--- 143
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IHRDIKS NIL+ F A ++DFGLA+ Y APE +I
Sbjct: 144 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEI 202
Query: 941 TEKSDVYSYGVVLLEVLTGKEPTDS-RIPDGAHIITWVNGELRERKREFTTILDRQLLMR 999
T KSD+YS+GVVLLE++TG D R P ++ + E+ + ++ +D++
Sbjct: 203 TPKSDIYSFGVVLLEIITGLPAVDEHREP---QLLLDIKEEIEDEEKTIEDYIDKKXNDA 259
Query: 1000 SGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
T ++ VA C++ +RP +K V +L+E
Sbjct: 260 DSTSVEAX---YSVASQCLHEKKNKRPDIKKVQQLLQE 294
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 113/215 (52%), Gaps = 12/215 (5%)
Query: 754 DDVVTRLSDTNI---VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPER-DQFSAEVQ 809
DD+ D NI +G G G V+R E V AVK L ++ ER ++F EV
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDV-AVKIL--MEQDFHAERVNEFLREVA 86
Query: 810 TLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG--V 867
+ +RH NIV +G ++ +Y+S GSL LLH+ D R ++ + V
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 868 AHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXY 927
A G+ YLH+ PPI+HRD+KS N+LV ++ + DFGL++L
Sbjct: 147 AKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPE- 204
Query: 928 GYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
++APE EKSDVYS+GV+L E+ T ++P
Sbjct: 205 -WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 110/215 (51%), Gaps = 12/215 (5%)
Query: 754 DDVVTRLSDTNI---VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPER-DQFSAEVQ 809
DD+ D NI +G G G V+R E V AVK L ++ ER ++F EV
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDV-AVKIL--MEQDFHAERVNEFLREVA 86
Query: 810 TLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG--V 867
+ +RH NIV +G ++ +Y+S GSL LLH+ D R ++ + V
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 868 AHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXY 927
A G+ YLH+ PPI+HR++KS N+LV ++ + DFGL++L
Sbjct: 147 AKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPE- 204
Query: 928 GYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
++APE EKSDVYS+GV+L E+ T ++P
Sbjct: 205 -WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 16/214 (7%)
Query: 758 TRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPER-DQFSAEVQTLGSIRH 816
L+ I+G G G VYR +V AVK + ++ + + E + ++H
Sbjct: 7 AELTLEEIIGIGGFGKVYRAFWIGDEV-AVKAARHDPDEDISQTIENVRQEAKLFAMLKH 65
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHH 876
NI+ L G C L+ ++ G L +L K++ D + + +A G+ YLH
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAV--QIARGMNYLHD 123
Query: 877 DCVPPIIHRDIKSNNILVGPQFE--------AFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
+ + PIIHRD+KS+NIL+ + E + DFGLA+ + Y
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW----HRTTKMSAAGAYA 179
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
++APE + ++ SDV+SYGV+L E+LTG+ P
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 10/224 (4%)
Query: 745 PFQKLN-FSVDDVVTRLSDTNIVGKGVSGIVY--RVEIPSRQVIAVK-KLWPVKNGELPE 800
P Q ++ F+ + T +S +VG G G V R+++PS++ I+V K V E
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
RD F E +G H NI+RL G + +++ +Y+ NGSL L +
Sbjct: 91 RD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXX 919
++ G+A G+ YL +HRD+ + NIL+ ++DFGLA++
Sbjct: 150 VGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ +PE K T SDV+SYG+VL EV++ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 102/243 (41%), Gaps = 51/243 (20%)
Query: 346 IPSFFGNFSRLKQLELDN-NRFFGQIPPTIGQLKELLLFFAWQNQLHGNIPELAYCVK-L 403
IPS N L L + N G IPP I +L +L + + G IP+ +K L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 404 QALDLSHNFLTGSVPSSXXXXXXXXXXXXXXXRFSGEIPPEIGGCTGLIRLRLGSNNFSG 463
LD S+N L SG +PP I L+ + N SG
Sbjct: 128 VTLDFSYNAL------------------------SGTLPPSISSLPNLVGITFDGNRISG 163
Query: 464 HIPSRIGLLHRL-TFLELSENQFTGEIPPEIGNCTQLEMVDLHQNKLQGT---------- 512
IP G +L T + +S N+ TG+IPP N L VDL +N L+G
Sbjct: 164 AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKN 222
Query: 513 ------IPSSLEFLFG-------LNVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNITG 559
+SL F G LN LDL N I GT+P+ L +L L+ L +S NN+ G
Sbjct: 223 TQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282
Query: 560 LIP 562
IP
Sbjct: 283 EIP 285
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 90/192 (46%), Gaps = 27/192 (14%)
Query: 465 IPSRIGLLHRLTFLELSE-NQFTGEIPPEIGNCTQLEMVDLHQNKLQGTIPSSLEFLFGL 523
IPS + L L FL + N G IPP I TQL + + + G IP L + L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 524 NVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNITGLIPXXXXXXXXXXXXXXXXNRING 583
LD S N++ GT+P ++ L +L + NRI+G
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDG------------------------NRISG 163
Query: 584 SIPEEIGRLQGLDILLNLSWNALTGPIPESFSNLSKLANLDLSNNMLTGSLKVL-GSLDN 642
+IP+ G L + +S N LTG IP +F+NL+ LA +DLS NML G VL GS N
Sbjct: 164 AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKN 222
Query: 643 LVSLNVSYNHFS 654
++++ N +
Sbjct: 223 TQKIHLAKNSLA 234
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 102/225 (45%), Gaps = 7/225 (3%)
Query: 457 GSNNFSGHIPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQLEMVDLHQNKLQGTIPSS 516
G NN G IP I L +L +L ++ +G IP + L +D N L GT+P S
Sbjct: 85 GINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS 144
Query: 517 LEFLFGLNVLDLSMNSIGGTIPENLGKLTSL-NKLVLSKNNITGLIPXXXXXXXXXXXXX 575
+ L L + N I G IP++ G + L + +S+N +TG IP
Sbjct: 145 ISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP-PTFANLNLAFVD 203
Query: 576 XXXNRINGSIPEEIGRLQGLDILLNLSWNALTGPIPESFSNLSK-LANLDLSNNMLTGSL 634
N + G G + ++L+ N+L + + LSK L LDL NN + G+L
Sbjct: 204 LSRNMLEGDASVLFGSDKNTQK-IHLAKNSLAFDLGK--VGLSKNLNGLDLRNNRIYGTL 260
Query: 635 -KVLGSLDNLVSLNVSYNHFSGILPNTKLFHGLPASAFYGNQQLC 678
+ L L L SLNVS+N+ G +P SA+ N+ LC
Sbjct: 261 PQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLC 305
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 95/234 (40%), Gaps = 6/234 (2%)
Query: 177 IPAEIGQLEALEIIRAGGNPGIHGEIPEEISNCKVLVFLGLADTGISGQIPRSVGELTNL 236
IP+ + L L + GG + G IP I+ L +L + T +SG IP + ++ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 237 RTLSVYTANITGYIPEEIGNCSALENLFLYENQIFGKIPDEX-XXXXXXXXXXXXXXXXS 295
TL ++G +P I + L + N+I G IPD +
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 296 GSIPEALGNCSSLTVIDVSLNSLGGEVPXXXXXXXXXXXXXXXXXNISGEIPSFFGNFSR 355
G IP N +L +D+S N L G+ +++ ++ G
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKN 245
Query: 356 LKQLELDNNRFFGQIPPTIGQLKELLLFFAWQNQLHGNIPELAYCVKLQALDLS 409
L L+L NNR +G +P + QLK L N L G IP+ LQ D+S
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG---NLQRFDVS 296
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 4/195 (2%)
Query: 82 PYQLLSFSHLTSLVLSNANLTGEIPPAIGNLSSLINLDLSFNALTGNIPEEIGKLAXXXX 141
P + + L L +++ N++G IP + + +L+ LD S+NAL+G +P I L
Sbjct: 94 PPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153
Query: 142 XXXXXXXIHGGIPREIGNCSKL-RRLELYDNQLSGNIPAEIGQLEALEIIRAGGNPGIHG 200
I G IP G+ SKL + + N+L+G IP L L + N + G
Sbjct: 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN-MLEG 211
Query: 201 EIPEEISNCKVLVFLGLADTGISGQIPRSVGELTNLRTLSVYTANITGYIPEEIGNCSAL 260
+ + K + LA ++ + + VG NL L + I G +P+ + L
Sbjct: 212 DASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFL 270
Query: 261 ENLFLYENQIFGKIP 275
+L + N + G+IP
Sbjct: 271 HSLNVSFNNLCGEIP 285
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 107/269 (39%), Gaps = 29/269 (10%)
Query: 58 CNWDYIKCSRTEIAITSIHIPTSFPY--QLLSFSHLTSLVLSNAN-LTGEIPPAIGNLSS 114
C+ D + ++ +++P +P L + +L L + N L G IPPAI L+
Sbjct: 43 CDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQ 102
Query: 115 LINLDLSFNALTGNIPEEIGKLAXXXXXXXXXXXIHGGIPREIGNCSKLRRLELYDNQLS 174
L L ++ ++G IP+ + ++ + G +P I + L + N++S
Sbjct: 103 LHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRIS 162
Query: 175 GNIPAEIGQLEALEIIRAGGNPGIHGEIPEEISNCKVLVFLGLADTGISGQIPRSVGELT 234
G IP G L + G+IP +N L F+ L+ + G G
Sbjct: 163 GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDK 221
Query: 235 NLRTLSVYTANITGYIPEEIGNCSALENLFLYENQIFGKIPDEXXXXXXXXXXXXXXXXX 294
N + + + N + ++G L L L N+I+
Sbjct: 222 NTQKIHL-AKNSLAFDLGKVGLSKNLNGLDLRNNRIY----------------------- 257
Query: 295 SGSIPEALGNCSSLTVIDVSLNSLGGEVP 323
G++P+ L L ++VS N+L GE+P
Sbjct: 258 -GTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 10/224 (4%)
Query: 745 PFQKLN-FSVDDVVTRLSDTNIVGKGVSGIVY--RVEIPSRQVIAVK-KLWPVKNGELPE 800
P Q ++ F+ + T +S +VG G G V R+++PS++ I+V K V E
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
RD F E +G H NI+RL G + +++ +Y+ NGSL L +
Sbjct: 91 RD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXX 919
++ G+A G+ YL +HRD+ + NIL+ ++DFGL+++
Sbjct: 150 VGMLRGIASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ +PE K T SDV+SYG+VL EV++ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 84.7 bits (208), Expect = 3e-16, Method: Composition-based stats.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 30/297 (10%)
Query: 743 FTPFQKLNFSVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERD 802
P L+ +D + L+ +G G G+V+ ++ +A+K +K G + E D
Sbjct: 14 LVPRGSLHMVIDP--SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKT---IKEGSMSE-D 67
Query: 803 QFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYK 862
F E + + + H +V+L G C L+F+++ +G L+ L ++ ++
Sbjct: 68 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG 127
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
+ L V G+AYL CV IHRD+ + N LVG ++DFG+ + F
Sbjct: 128 MCLDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTG 183
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGEL 981
+ +PE + + KSDV+S+GV++ EV + GK P ++R + ++ ++
Sbjct: 184 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGF 241
Query: 982 RERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
R K + T + +++ C PE+RP + L EI
Sbjct: 242 RLYKPRLAS-----------THVYQIMN------HCWKERPEDRPAFSRLLRQLAEI 281
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 9/211 (4%)
Query: 757 VTRLSDTNIVGKGVSGIVY--RVEIPSRQVIAVK-KLWPVKNGELPERDQFSAEVQTLGS 813
T +S +VG G G V R+++PS++ I+V K V E RD F E +G
Sbjct: 15 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQ 73
Query: 814 IRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAY 873
H NI+RL G + +++ +Y+ NGSL L + ++ G+A G+ Y
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 874 LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXXXXXXXXXYGYIAP 932
L +HRD+ + NIL+ ++DFGL+++ + +P
Sbjct: 134 LSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 933 EYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
E K T SDV+SYG+VL EV++ G+ P
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 9/211 (4%)
Query: 757 VTRLSDTNIVGKGVSGIVY--RVEIPSRQVIAVK-KLWPVKNGELPERDQFSAEVQTLGS 813
T +S +VG G G V R+++PS++ I+V K V E RD F E +G
Sbjct: 32 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQ 90
Query: 814 IRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAY 873
H NI+RL G + +++ +Y+ NGSL L + ++ G+A G+ Y
Sbjct: 91 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 150
Query: 874 LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXXXXXXXXXYGYIAP 932
L +HRD+ + NIL+ ++DFGL+++ + +P
Sbjct: 151 LSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 207
Query: 933 EYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
E K T SDV+SYG+VL EV++ G+ P
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 10/224 (4%)
Query: 745 PFQKLN-FSVDDVVTRLSDTNIVGKGVSGIVY--RVEIPSRQVIAVK-KLWPVKNGELPE 800
P Q ++ F+ + T +S +VG G G V R+++PS++ I+V K V E
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
RD F E +G H NI+RL G + +++ +Y+ NGSL L +
Sbjct: 91 RD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXX 919
++ G+A G+ YL +HRD+ + NIL+ ++DFGL+++
Sbjct: 150 VGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ +PE K T SDV+SYG+VL EV++ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 10/224 (4%)
Query: 745 PFQKLN-FSVDDVVTRLSDTNIVGKGVSGIVY--RVEIPSRQVIAVK-KLWPVKNGELPE 800
P Q ++ F+ + T +S +VG G G V R+++PS++ I+V K V E
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
RD F E +G H NI+RL G + +++ +Y+ NGSL L +
Sbjct: 91 RD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXX 919
++ G+A G+ YL +HRD+ + NIL+ ++DFGL+++
Sbjct: 150 VGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ +PE K T SDV+SYG+VL EV++ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 10/224 (4%)
Query: 745 PFQKLN-FSVDDVVTRLSDTNIVGKGVSGIVY--RVEIPSRQVIAVK-KLWPVKNGELPE 800
P Q ++ F+ + T +S +VG G G V R+++PS++ I+V K V E
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
RD F E +G H NI+RL G + +++ +Y+ NGSL L +
Sbjct: 91 RD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXX 919
++ G+A G+ YL +HRD+ + NIL+ ++DFGL+++
Sbjct: 150 VGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ +PE K T SDV+SYG+VL EV++ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 10/224 (4%)
Query: 745 PFQKLN-FSVDDVVTRLSDTNIVGKGVSGIVY--RVEIPSRQVIAVK-KLWPVKNGELPE 800
P Q ++ F+ + T +S +VG G G V R+++PS++ I+V K V E
Sbjct: 29 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 88
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
RD F E +G H NI+RL G + +++ +Y+ NGSL L +
Sbjct: 89 RD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 147
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXX 919
++ G+A G+ YL +HRD+ + NIL+ ++DFGL+++
Sbjct: 148 VGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ +PE K T SDV+SYG+VL EV++ G+ P
Sbjct: 205 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 10/224 (4%)
Query: 745 PFQKLN-FSVDDVVTRLSDTNIVGKGVSGIVY--RVEIPSRQVIAVK-KLWPVKNGELPE 800
P Q ++ F+ + T +S +VG G G V R+++PS++ I+V K V E
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
RD F E +G H NI+RL G + +++ +Y+ NGSL L +
Sbjct: 91 RD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXX 919
++ G+A G+ YL +HRD+ + NIL+ ++DFGL+++
Sbjct: 150 VGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ +PE K T SDV+SYG+VL EV++ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 10/224 (4%)
Query: 745 PFQKLN-FSVDDVVTRLSDTNIVGKGVSGIVY--RVEIPSRQVIAVK-KLWPVKNGELPE 800
P Q ++ F+ + T +S +VG G G V R+++PS++ I+V K V E
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
RD F E +G H NI+RL G + +++ +Y+ NGSL L +
Sbjct: 91 RD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXX 919
++ G+A G+ YL +HRD+ + NIL+ ++DFGL ++
Sbjct: 150 VGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ +PE K T SDV+SYG+VL EV++ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 83.6 bits (205), Expect = 6e-16, Method: Composition-based stats.
Identities = 75/279 (26%), Positives = 127/279 (45%), Gaps = 37/279 (13%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+VG+G G+V + + ++ V A+K++ ER F E++ L + H NIV+L G
Sbjct: 16 VVGRGAFGVVCKAKWRAKDV-AIKQI-----ESESERKAFIVELRQLSRVNHPNIVKLYG 69
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--ILGVAHGLAYLHHDCVPPI 882
C N L+ +Y GSL +LH + + + + + L + G+AYLH +
Sbjct: 70 ACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 883 IHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
IHRD+K N+L+ + DFG A ++APE +
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYS 182
Query: 942 EKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWV--NGELRERKREFTTILDRQLLMR 999
EK DV+S+G++L EV+T ++P D I A I W NG R L++
Sbjct: 183 EKCDVFSWGIILWEVITRRKPFD-EIGGPAFRIMWAVHNGT-------------RPPLIK 228
Query: 1000 SGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
+ + E L C + P +RP+M+++ ++ +
Sbjct: 229 NLPKPIESLMT-----RCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its
Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 83.6 bits (205), Expect = 6e-16, Method: Composition-based stats.
Identities = 75/279 (26%), Positives = 127/279 (45%), Gaps = 37/279 (13%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+VG+G G+V + + ++ V A+K++ ER F E++ L + H NIV+L G
Sbjct: 15 VVGRGAFGVVCKAKWRAKDV-AIKQI-----ESESERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--ILGVAHGLAYLHHDCVPPI 882
C N L+ +Y GSL +LH + + + + + L + G+AYLH +
Sbjct: 69 ACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 883 IHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
IHRD+K N+L+ + DFG A ++APE +
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYS 181
Query: 942 EKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWV--NGELRERKREFTTILDRQLLMR 999
EK DV+S+G++L EV+T ++P D I A I W NG R L++
Sbjct: 182 EKCDVFSWGIILWEVITRRKPFD-EIGGPAFRIMWAVHNGT-------------RPPLIK 227
Query: 1000 SGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
+ + E L C + P +RP+M+++ ++ +
Sbjct: 228 NLPKPIESLMT-----RCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 83.2 bits (204), Expect = 7e-16, Method: Composition-based stats.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 28/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G+V+ ++ +A+K ++ G + E D F E + + + H +V+L G
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEED-FIEEAEVMMKLSHPKLVQLYGV 68
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
C L+F+++ +G L+ L ++ ++ + L V G+AYL CV IHR
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV---IHR 125
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSD 945
D+ + N LVG ++DFG+ + F + +PE + + KSD
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 946 VYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
V+S+GV++ EV + GK P ++R + ++ ++ R K + T +
Sbjct: 185 VWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLYKPRLAS-----------THV 231
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
+++ C PE+RP + L EI
Sbjct: 232 YQIMN------HCWKERPEDRPAFSRLLRQLAEI 259
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
Length = 266
Score = 83.2 bits (204), Expect = 7e-16, Method: Composition-based stats.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 28/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G+V+ ++ +A+K ++ G + E D F E + + + H +V+L G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEED-FIEEAEVMMKLSHPKLVQLYGV 70
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
C L+F+++ +G L+ L ++ ++ + L V G+AYL CV IHR
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV---IHR 127
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSD 945
D+ + N LVG ++DFG+ + F + +PE + + KSD
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 946 VYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
V+S+GV++ EV + GK P ++R + ++ ++ R K + T +
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLYKPRLAS-----------THV 233
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
+++ C PE+RP + L EI
Sbjct: 234 YQIMN------HCWKERPEDRPAFSRLLRQLAEI 261
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 83.2 bits (204), Expect = 8e-16, Method: Composition-based stats.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 28/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G+V+ ++ +A+K ++ G + E D F E + + + H +V+L G
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEED-FIEEAEVMMKLSHPKLVQLYGV 73
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
C L+F+++ +G L+ L ++ ++ + L V G+AYL CV IHR
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV---IHR 130
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSD 945
D+ + N LVG ++DFG+ + F + +PE + + KSD
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 946 VYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
V+S+GV++ EV + GK P ++R + ++ ++ R K + T +
Sbjct: 190 VWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLYKPRLAS-----------THV 236
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
+++ C PE+RP + L EI
Sbjct: 237 YQIMN------HCWRERPEDRPAFSRLLRQLAEI 264
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 20/212 (9%)
Query: 766 VGKGVSGIVYRVE-IPSRQVIAVKKLW---PVKNGELPERDQ-FSAEVQTLGSIRHKNIV 820
+GKG G+V++ + + V+A+K L E+ E+ Q F EV + ++ H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L G +N ++ +++ G L L +K + W + +++L +A G+ Y+ + P
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN-P 143
Query: 881 PIIHRDIKSNNILVGPQFE-----AFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY- 934
PI+HRD++S NI + E A +ADFGL++ + ++APE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAPETI 198
Query: 935 -GYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
TEK+D YS+ ++L +LTG+ P D
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 766 VGKGVSGIVYRVE------IPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G V+ E + ++AVK L K+ L R F E + L +++H++I
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKAL---KDPTLAARKDFQREAELLTNLQHEHI 79
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLH----EKKVFLDWDSR-----------YKII 864
V+ G C +G +++F+Y+ +G L L + + +D R I
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+A G+ YL +HRD+ + N LVG + DFG+++
Sbjct: 140 SQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
++ PE K T +SDV+S+GV+L E+ T GK+P
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/296 (26%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 766 VGKGVSGIVYRVE----IPS--RQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G V+ E +P + ++AVK L K R F E + L ++H++I
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL---KEASESARQDFQREAELLTMLQHQHI 82
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLH----EKKVFLDWDSRYKIILG--------- 866
VR G C GR L++F+Y+ +G L L + K+ + LG
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 867 -VAHGLAYLH--HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
VA G+ YL H +HRD+ + N LVG + DFG+++
Sbjct: 143 QVAAGMVYLAGLH-----FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELR 982
++ PE K T +SDV+S+GVVL E+ T GK+P ++ + I G
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW-YQLSNTEAIDCITQGREL 256
Query: 983 ERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
ER R +V + C P++R ++KDV A L+ +
Sbjct: 257 ERPRACPP------------------EVYAIMRGCWQREPQQRHSIKDVHARLQAL 294
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/296 (26%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 766 VGKGVSGIVYRVE----IPS--RQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G V+ E +P + ++AVK L K R F E + L ++H++I
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL---KEASESARQDFQREAELLTMLQHQHI 76
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLH----EKKVFLDWDSRYKIILG--------- 866
VR G C GR L++F+Y+ +G L L + K+ + LG
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 867 -VAHGLAYLH--HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
VA G+ YL H +HRD+ + N LVG + DFG+++
Sbjct: 137 QVAAGMVYLAGLH-----FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELR 982
++ PE K T +SDV+S+GVVL E+ T GK+P ++ + I G
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW-YQLSNTEAIDCITQGREL 250
Query: 983 ERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
ER R +V + C P++R ++KDV A L+ +
Sbjct: 251 ERPRACPP------------------EVYAIMRGCWQREPQQRHSIKDVHARLQAL 288
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/296 (26%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 766 VGKGVSGIVYRVE----IPS--RQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G V+ E +P + ++AVK L K R F E + L ++H++I
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL---KEASESARQDFQREAELLTMLQHQHI 105
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLH----EKKVFLDWDSRYKIILG--------- 866
VR G C GR L++F+Y+ +G L L + K+ + LG
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 867 -VAHGLAYLH--HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
VA G+ YL H +HRD+ + N LVG + DFG+++
Sbjct: 166 QVAAGMVYLAGLH-----FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELR 982
++ PE K T +SDV+S+GVVL E+ T GK+P ++ + I G
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW-YQLSNTEAIDCITQGREL 279
Query: 983 ERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
ER R +V + C P++R ++KDV A L+ +
Sbjct: 280 ERPRACPP------------------EVYAIMRGCWQREPQQRHSIKDVHARLQAL 317
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 10/224 (4%)
Query: 745 PFQKLN-FSVDDVVTRLSDTNIVGKGVSGIVY--RVEIPSRQVIAVK-KLWPVKNGELPE 800
P Q ++ F+ + T +S +VG G G V R+++PS++ I+V K V E
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
RD F E +G H NI+RL G + +++ + + NGSL L +
Sbjct: 91 RD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 149
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXX 919
++ G+A G+ YL +HRD+ + NIL+ ++DFGL+++
Sbjct: 150 VGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ +PE K T SDV+SYG+VL EV++ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 757 VTRLSDTNIVGKGVSGIVY--RVEIPSRQVIAVK-KLWPVKNGELPERDQFSAEVQTLGS 813
T +S +VG G G V R+++PS++ I+V K V E RD F E +G
Sbjct: 15 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQ 73
Query: 814 IRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAY 873
H NI+RL G + +++ + + NGSL L + ++ G+A G+ Y
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 874 LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXXXXXXXXXYGYIAP 932
L +HRD+ + NIL+ ++DFGL+++ + +P
Sbjct: 134 LSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 933 EYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
E K T SDV+SYG+VL EV++ G+ P
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 10/224 (4%)
Query: 745 PFQKLN-FSVDDVVTRLSDTNIVGKGVSGIVY--RVEIPSRQVIAVK-KLWPVKNGELPE 800
P Q ++ F+ + T +S +VG G G V R+++PS++ I+V K V E
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
RD F E +G H NI+RL G + +++ + + NGSL L +
Sbjct: 91 RD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 149
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXX 919
++ G+A G+ YL +HRD+ + NIL+ ++DFGL+++
Sbjct: 150 VGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ +PE K T SDV+SYG+VL EV++ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 68/278 (24%), Positives = 122/278 (43%), Gaps = 28/278 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G+V + + +AVK +K G + E D+F E QT+ + H +V+ G
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKM---IKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGV 71
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
C+ ++ +YISNG L L L+ ++ V G+A+L IHR
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSD 945
D+ + N LV ++DFG+ + + + APE + K + KSD
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 946 VYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
V+++G+++ EV + GK P D + N E+ + L R
Sbjct: 188 VWAFGILMWEVFSLGKMPYD----------LYTNSEV------VLKVSQGHRLYRPHLAS 231
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
+ Q++ C + PE+RPT + + + ++ +R ++
Sbjct: 232 DTIYQIM---YSCWHELPEKRPTFQQLLSSIEPLREKD 266
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 27/233 (11%)
Query: 745 PFQKLNFSVDDVVTRLSDTNIVGKGVSGIVYR--VEIPSRQ--VIAVKKLWPVKNGELP- 799
P+ + F+ + V+ + ++G G G V R ++ P ++ +A+K L K G
Sbjct: 1 PWGSMEFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL---KGGYTER 57
Query: 800 ERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDS 859
+R +F +E +G H NI+RL G N ++L +++ NG+L L D
Sbjct: 58 QRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN------DG 111
Query: 860 RYKII------LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXX 913
++ +I G+A G+ YL +HRD+ + NILV ++DFGL++
Sbjct: 112 QFTVIQLVGMLRGIASGMRYLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEE 168
Query: 914 XXXXXXXXXX---XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE K T SD +SYG+V+ EV++ G+ P
Sbjct: 169 NSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 20/212 (9%)
Query: 766 VGKGVSGIVYRVE-IPSRQVIAVKKLW---PVKNGELPERDQ-FSAEVQTLGSIRHKNIV 820
+GKG G+V++ + + V+A+K L E+ E+ Q F EV + ++ H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L G +N ++ +++ G L L +K + W + +++L +A G+ Y+ + P
Sbjct: 87 KLYGLMHN--PPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN-P 143
Query: 881 PIIHRDIKSNNILVGPQFE-----AFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY- 934
PI+HRD++S NI + E A +ADFG ++ + ++APE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAPETI 198
Query: 935 -GYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
TEK+D YS+ ++L +LTG+ P D
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With
Imidazo[1,5-A]quinoxaline
Length = 267
Score = 79.7 bits (195), Expect = 8e-15, Method: Composition-based stats.
Identities = 66/274 (24%), Positives = 122/274 (44%), Gaps = 28/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G+V+ ++ +A+K ++ G + E D F E + + + H +V+L G
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEED-FIEEAEVMMKLSHPKLVQLYGV 71
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
C L+ +++ +G L+ L ++ ++ + L V G+AYL CV IHR
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV---IHR 128
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSD 945
D+ + N LVG ++DFG+ + F + +PE + + KSD
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 946 VYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
V+S+GV++ EV + GK P ++R + ++ ++ R K + T +
Sbjct: 188 VWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLYKPRLAS-----------THV 234
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
+++ C PE+RP + L EI
Sbjct: 235 YQIMN------HCWRERPEDRPAFSRLLRQLAEI 262
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 20/212 (9%)
Query: 766 VGKGVSGIVYRVE-IPSRQVIAVKKLW---PVKNGELPERDQ-FSAEVQTLGSIRHKNIV 820
+GKG G+V++ + + V+A+K L E+ E+ Q F EV + ++ H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L G +N ++ +++ G L L +K + W + +++L +A G+ Y+ + P
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN-P 143
Query: 881 PIIHRDIKSNNILVGPQFE-----AFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY- 934
PI+HRD++S NI + E A +ADF L++ + ++APE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAPETI 198
Query: 935 -GYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
TEK+D YS+ ++L +LTG+ P D
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 78.6 bits (192), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 9/202 (4%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G+V+ ++ +A+K ++ G + E D F E + + + H +V+L G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEED-FIEEAEVMMKLSHPKLVQLYGV 70
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
C L+F+++ +G L+ L ++ ++ + L V G+AYL V IHR
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASV---IHR 127
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSD 945
D+ + N LVG ++DFG+ + F + +PE + + KSD
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 946 VYSYGVVLLEVLT-GKEPTDSR 966
V+S+GV++ EV + GK P ++R
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENR 208
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 329
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y+S GSL L E +L + +A G+AY+ +
Sbjct: 330 VVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 385
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 444
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 445 SDVWSFGILLTELT-----TKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 488
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 489 CPESLHDL--MCQCWRKEPEERPTFEYLQAFLED 520
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 70/283 (24%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 765 IVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLL 823
++G G + +V P ++ +A+K++ K D+ E+Q + H NIV
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT--SMDELLKEIQAMSQCHHPNIVSYY 74
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLL-------HEKKVFLDWDSRYKIILGVAHGLAYLHH 876
L+ +S GS+ ++ K LD + I+ V GL YLH
Sbjct: 75 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 134
Query: 877 DCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG---YIAPE 933
+ IHRD+K+ NIL+G +ADFG++ G ++APE
Sbjct: 135 NGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 191
Query: 934 Y-----GYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREF 988
GY K+D++S+G+ +E+ TG P P ++T N +
Sbjct: 192 VMEQVRGYDF----KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN----DPPSLE 243
Query: 989 TTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDV 1031
T + D+++L + G ++M+ LC+ PE+RPT ++
Sbjct: 244 TGVQDKEMLKKYGKSFRKMIS------LCLQKDPEKRPTAAEL 280
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 70/283 (24%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 765 IVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLL 823
++G G + +V P ++ +A+K++ K D+ E+Q + H NIV
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT--SMDELLKEIQAMSQCHHPNIVSYY 79
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLL-------HEKKVFLDWDSRYKIILGVAHGLAYLHH 876
L+ +S GS+ ++ K LD + I+ V GL YLH
Sbjct: 80 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139
Query: 877 DCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG---YIAPE 933
+ IHRD+K+ NIL+G +ADFG++ G ++APE
Sbjct: 140 NGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196
Query: 934 Y-----GYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREF 988
GY K+D++S+G+ +E+ TG P P ++T N +
Sbjct: 197 VMEQVRGYDF----KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN----DPPSLE 248
Query: 989 TTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDV 1031
T + D+++L + G ++M+ LC+ PE+RPT ++
Sbjct: 249 TGVQDKEMLKKYGKSFRKMIS------LCLQKDPEKRPTAAEL 285
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 24/226 (10%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGEL-PERD-QFSAEVQTLGSI 814
T L ++G G G VY+ + +P + + + + N P+ + +F E + S+
Sbjct: 15 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 74
Query: 815 RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKIILGVA 868
H ++VRLLG C + +L+ + +G L +HE K + L+W + +A
Sbjct: 75 DHPHLVRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIA 127
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
G+ YL ++HRD+ + N+LV + DFGLA+L
Sbjct: 128 KGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 184
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDS----RIPD 969
++A E + K T +SDV+SYGV + E++T G +P D IPD
Sbjct: 185 WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD 230
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 22/226 (9%)
Query: 749 LNFSVDDVVTRLSDTNIVGKGVSGIVYR---------VEIPSRQVIAVKKLWPVKNGEL- 798
L F+ + + ++ ++G G G VY+ E+P +A+K L K G
Sbjct: 35 LKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVP----VAIKTL---KAGYTE 87
Query: 799 PERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWD 858
+R F E +G H NI+RL G + + +++ +Y+ NG+L L EK
Sbjct: 88 KQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL 147
Query: 859 SRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXX 917
++ G+A G+ YL + +HRD+ + NILV ++DFGL+++
Sbjct: 148 QLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 204
Query: 918 XXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE K T SDV+S+G+V+ EV+T G+ P
Sbjct: 205 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src, In
Complex With Amp-pnp
Length = 452
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 246
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y+S GSL L E +L + +A G+AY+ +
Sbjct: 247 VVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 302
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 361
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 362 SDVWSFGILLTELT-----TKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 405
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 406 CPESLHDLMCQ--CWRKEPEERPTFEYLQAFLED 437
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 246
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y+S GSL L E +L + +A G+AY+ +
Sbjct: 247 VVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 302
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 361
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 362 SDVWSFGILLTELT-----TKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 405
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 406 CPESLHDLMCQ--CWRKEPEERPTFEYLQAFLED 437
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 24/226 (10%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGEL-PERD-QFSAEVQTLGSI 814
T L ++G G G VY+ + +P + + + + N P+ + +F E + S+
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 815 RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKIILGVA 868
H ++VRLLG C + +L+ + +G L +HE K + L+W + +A
Sbjct: 98 DHPHLVRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIA 150
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
G+ YL ++HRD+ + N+LV + DFGLA+L
Sbjct: 151 KGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 207
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDS----RIPD 969
++A E + K T +SDV+SYGV + E++T G +P D IPD
Sbjct: 208 WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD 253
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant)
In Complex With N6-Benzyl Adp
Length = 452
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 246
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y+S GSL L E +L + +A G+AY+ +
Sbjct: 247 VVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 302
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 361
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 362 SDVWSFGILLTELT-----TKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 405
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 406 CPESLHDLMCQ--CWRKEPEERPTFEYLQAFLED 437
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 13/220 (5%)
Query: 750 NFSVDDVVTRLSDTNIVGKGVSG-IVY-RVEIPSRQ--VIAVKKLWPVKNGELP-ERDQF 804
+F+ + +R+ I+G G SG + Y R+ +P ++ +A+K L K G +R F
Sbjct: 41 SFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL---KAGYTERQRRDF 97
Query: 805 SAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII 864
+E +G H NI+RL G GR +++ +Y+ NGSL L ++
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXXXXXX 923
GV G+ YL +HRD+ + N+LV ++DFGL+++
Sbjct: 158 RGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGG 214
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE + SDV+S+GVV+ EVL G+ P
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.6 bits (187), Expect = 7e-14, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 13/220 (5%)
Query: 750 NFSVDDVVTRLSDTNIVGKGVSG-IVY-RVEIPSRQ--VIAVKKLWPVKNGELP-ERDQF 804
+F+ + +R+ I+G G SG + Y R+ +P ++ +A+K L K G +R F
Sbjct: 41 SFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL---KAGYTERQRRDF 97
Query: 805 SAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII 864
+E +G H NI+RL G GR +++ +Y+ NGSL L ++
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXXXXXX 923
GV G+ YL +HRD+ + N+LV ++DFGL+++
Sbjct: 158 RGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGG 214
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE + SDV+S+GVV+ EVL G+ P
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +Y+
Sbjct: 71 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 127
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L + K +D + + G+ YL IHRD+ + NILV +
Sbjct: 128 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 184
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 185 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 244
Query: 960 KEPTDS 965
E + S
Sbjct: 245 IEKSKS 250
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 27/227 (11%)
Query: 751 FSVDDVVTRLSDTNIVGKGVSGIVYR--VEIPSRQ--VIAVKKLWPVKNGELP-ERDQFS 805
F+ + V+ + ++G G G V R ++ P ++ +A+K L K G +R +F
Sbjct: 9 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL---KGGYTERQRREFL 65
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII- 864
+E +G H NI+RL G N ++L +++ NG+L L D ++ +I
Sbjct: 66 SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN------DGQFTVIQ 119
Query: 865 -----LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
G+A G+ YL +HRD+ + NILV ++DFGL++
Sbjct: 120 LVGMLRGIASGMRYLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
Query: 920 XXXX---XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE K T SD +SYG+V+ EV++ G+ P
Sbjct: 177 ETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +Y+
Sbjct: 58 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L + K +D + + G+ YL IHRD+ + NILV +
Sbjct: 115 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 171
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 172 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 231
Query: 960 KEPTDS 965
E + S
Sbjct: 232 IEKSKS 237
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +Y+
Sbjct: 39 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 95
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L + K +D + + G+ YL IHRD+ + NILV +
Sbjct: 96 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 152
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 153 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 212
Query: 960 KEPTDS 965
E + S
Sbjct: 213 IEKSKS 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +Y+
Sbjct: 40 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L + K +D + + G+ YL IHRD+ + NILV +
Sbjct: 97 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 153
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 154 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 213
Query: 960 KEPTDS 965
E + S
Sbjct: 214 IEKSKS 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +Y+
Sbjct: 44 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 100
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L + K +D + + G+ YL IHRD+ + NILV +
Sbjct: 101 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 157
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 158 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 217
Query: 960 KEPTDS 965
E + S
Sbjct: 218 IEKSKS 223
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +Y+
Sbjct: 47 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 103
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L + K +D + + G+ YL IHRD+ + NILV +
Sbjct: 104 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 160
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 161 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 220
Query: 960 KEPTDS 965
E + S
Sbjct: 221 IEKSKS 226
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +Y+
Sbjct: 40 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L + K +D + + G+ YL IHRD+ + NILV +
Sbjct: 97 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 153
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 154 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 213
Query: 960 KEPTDS 965
E + S
Sbjct: 214 IEKSKS 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +Y+
Sbjct: 43 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L + K +D + + G+ YL IHRD+ + NILV +
Sbjct: 100 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 156
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 216
Query: 960 KEPTDS 965
E + S
Sbjct: 217 IEKSKS 222
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 765 IVGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLL 823
++GKG G +V + +V+ +K+L ++ E +R F EV+ + + H N+++ +
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKEL--IRFDEETQR-TFLKEVKVMRCLEHPNVLKFI 73
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
G + + +YI G+L G++ W R +A G+AYLH II
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNII 130
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG------------YIA 931
HRD+ S+N LV +ADFGLA+L ++A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 932 PEYGYSLKITEKSDVYSYGVVLLEVL 957
PE EK DV+S+G+VL E++
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +Y+
Sbjct: 58 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L + K +D + + G+ YL IHRD+ + NILV +
Sbjct: 115 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 171
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 172 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 231
Query: 960 KEPTDS 965
E + S
Sbjct: 232 IEKSKS 237
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +Y+
Sbjct: 45 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 101
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L + K +D + + G+ YL IHRD+ + NILV +
Sbjct: 102 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 158
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 159 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 218
Query: 960 KEPTDS 965
E + S
Sbjct: 219 IEKSKS 224
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +Y+
Sbjct: 46 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 102
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L + K +D + + G+ YL IHRD+ + NILV +
Sbjct: 103 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 159
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 160 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 219
Query: 960 KEPTDS 965
E + S
Sbjct: 220 IEKSKS 225
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +Y+
Sbjct: 38 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 94
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L + K +D + + G+ YL IHRD+ + NILV +
Sbjct: 95 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 151
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 152 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 211
Query: 960 KEPTDS 965
E + S
Sbjct: 212 IEKSKS 217
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 80
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ +++ +Y+S GSL L E +L + +A G+AY+ +
Sbjct: 81 VVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI-KWTAPEAALYGRFTIK 195
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 196 SDVWSFGILLTEL-----TTKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 239
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 240 CPESLHDLMCQ--CWRKDPEERPTFEYLQAFLED 271
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
Length = 286
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 77/274 (28%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + IRH+ +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKIRHEKLVQLYA 80
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y+S GSL L E +L + +A G+AY+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 195
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 196 SDVWSFGILLTEL-----TTKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 239
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 240 CPESLHDLMCQ--CWRKDPEERPTFEYLQAFLED 271
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 89/186 (47%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +Y+
Sbjct: 40 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L + K +D + + G+ YL IHRD+ + NILV +
Sbjct: 97 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 153
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 154 KIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 213
Query: 960 KEPTDS 965
E + S
Sbjct: 214 IEKSKS 219
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 76.3 bits (186), Expect = 9e-14, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 80
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ +++ +Y+S GSL L E +L + +A G+AY+ +
Sbjct: 81 VVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 195
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 196 SDVWSFGILLTEL-----TTKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 239
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 240 CPESLHDLMCQ--CWRKDPEERPTFEYLQAFLED 271
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 76.3 bits (186), Expect = 9e-14, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 765 IVGKGVSGIVY--RVEIPSRQVIAVK-KLWPVKNGELPERDQFSAEVQTLGSIRHKNIVR 821
++G G G V R+++P ++ +AV K V E RD F E +G H N+V
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRD-FLCEASIMGQFDHPNVVH 108
Query: 822 LLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAYLH 875
L G G+ +++ +++ NG+L L + D ++ +I G+A G+ YL
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKH------DGQFTVIQLVGMLRGIAAGMRYLA 162
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXXXXXXXXXYGYIAPEY 934
+HRD+ + NILV ++DFGL+++ + APE
Sbjct: 163 D---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEA 219
Query: 935 GYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K T SDV+SYG+V+ EV++ G+ P
Sbjct: 220 IQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 118/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GNMSPE--AFLQEAQVMKKLRHEKLVQLYA 247
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y+S GSL L E +L + +A G+AY+ +
Sbjct: 248 VVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 303
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGL +L + APE + T K
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 362
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 363 SDVWSFGILLTELT-----TKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 406
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 407 CPESLHDL--MCQCWRKDPEERPTFEYLQAFLED 438
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 77/274 (28%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 70
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y+S GSL L E +L + +A G+AY+ +
Sbjct: 71 VVSEEPIXIVT-EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 126
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI-KWTAPEAALYGRFTIK 185
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 186 SDVWSFGILLTEL-----TTKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 229
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 230 CPESLHDLMCQ--CWRKEPEERPTFEYLQAFLED 261
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 79/314 (25%), Positives = 128/314 (40%), Gaps = 55/314 (17%)
Query: 752 SVDDVVTRLSDTNIV-----GKGVSGIVYRVEI------PSRQVIAVKKLWPVKNGELPE 800
++D V + NIV G+G G V+ E + ++AVK L K+
Sbjct: 2 AMDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTL---KDASDNA 58
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLH----------- 849
R F E + L +++H++IV+ G C G +++F+Y+ +G L L
Sbjct: 59 RKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAE 118
Query: 850 -EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLA 908
L I +A G+ YL +HRD+ + N LVG + DFG++
Sbjct: 119 GNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMS 175
Query: 909 KLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRI 967
+ ++ PE K T +SDV+S GVVL E+ T GK+P
Sbjct: 176 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP----- 230
Query: 968 PDGAHIITWV---NGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEE 1024
W N E+ E I ++L R T QE+ +++ L C P
Sbjct: 231 --------WYQLSNNEVIE------CITQGRVLQRPRTCPQEVYELM---LGCWQREPHM 273
Query: 1025 RPTMKDVTAMLKEI 1038
R +K + +L+ +
Sbjct: 274 RKNIKGIHTLLQNL 287
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 73
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y+S GSL L E +L + +A G+AY+ +
Sbjct: 74 VVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYV 129
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 188
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 189 SDVWSFGILLTEL-----TTKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 232
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 233 CPESLHDLMCQ--CWRKEPEERPTFEYLQAFLED 264
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
Length = 275
Score = 75.5 bits (184), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 69
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y+S GSL L E +L + +A G+AY+ +
Sbjct: 70 VVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 125
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 184
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 185 SDVWSFGILLTEL-----TTKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 228
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 229 CPESLHDLMCQ--CWRKDPEERPTFEYLQAFLED 260
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.5 bits (184), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 71
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y+S GSL L E +L + +A G+AY+ +
Sbjct: 72 VVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 127
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 186
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 187 SDVWSFGILLTEL-----TTKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 230
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 231 CPESLHDLMCQ--CWRKDPEERPTFEYLQAFLED 262
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.5 bits (184), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 80
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y+S GSL L E +L + +A G+AY+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 195
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 196 SDVWSFGILLTEL-----TTKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 239
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 240 CPESLHDLMCQ--CWRKDPEERPTFEYLQAFLED 271
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 80
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y+S GSL L E +L + +A G+AY+ +
Sbjct: 81 VVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 195
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 196 SDVWSFGILLTEL-----TTKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 239
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 240 CPESLHDLMCQ--CWRKDPEERPTFEYLQAFLED 271
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 74/288 (25%), Positives = 135/288 (46%), Gaps = 34/288 (11%)
Query: 759 RLSDTNIVGKGVSGIVYRVE-IPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHK 817
+ + +VG+G G+V + + +++A+KK + ++ ++ E++ L +RH+
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR-EIKLLKQLRHE 84
Query: 818 NIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVF---LDWDSRYKIILGVAHGLAYL 874
N+V LL C + L+F+++ + +L + ++F LD+ K + + +G+ +
Sbjct: 85 NLVNLLEVCKKKKRWYLVFEFVDHT----ILDDLELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 875 H-HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE 933
H H+ IIHRDIK NILV L DFG A+ Y APE
Sbjct: 141 HSHN----IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYR--APE 194
Query: 934 YGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNGELRERKRE--- 987
+K + DV++ G ++ E+ G+ P DS I HI+ + G L R +E
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCL-GNLIPRHQELFN 253
Query: 988 ---------FTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERP 1026
I +R+ L R ++ E+ V+ +A C++ P++RP
Sbjct: 254 KNPVFAGVRLPEIKEREPLERRYPKLSEV--VIDLAKKCLHIDPDKRP 299
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +++
Sbjct: 43 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLP 99
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L + K +D + + G+ YL IHRD+ + NILV +
Sbjct: 100 YGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 156
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 216
Query: 960 KEPTDS 965
E + S
Sbjct: 217 IEKSKS 222
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 21/209 (10%)
Query: 765 IVGKGVSGIVY--RVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVR 821
++G G G V R+++P ++ I V + +K G +R F +E +G H NI+
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVA-IKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 822 LLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAYLH 875
L G + +++ +Y+ NGSL L + D R+ +I G+ G+ YL
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKN------DGRFTVIQLVGMLRGIGSGMKYLS 148
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXXXXXXXXXYGYIAPEY 934
+HRD+ + NILV ++DFG++++ + APE
Sbjct: 149 DMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 205
Query: 935 GYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K T SDV+SYG+V+ EV++ G+ P
Sbjct: 206 IAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 75/274 (27%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 80
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ +++ +Y+S G L L E +L + +A G+AY+ +
Sbjct: 81 VVSEEPIYIVM-EYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 195
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 196 SDVWSFGILLTEL-----TTKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 239
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 240 CPESLHDLMCQ--CWRKDPEERPTFEYLQAFLED 271
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 21/209 (10%)
Query: 765 IVGKGVSGIVY--RVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVR 821
++G G G V R+++P ++ I V + +K G +R F +E +G H NI+
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVA-IKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 822 LLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAYLH 875
L G + +++ +Y+ NGSL L + D R+ +I G+ G+ YL
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKN------DGRFTVIQLVGMLRGIGSGMKYLS 127
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXXXXXXXXXYGYIAPEY 934
+HRD+ + NILV ++DFG++++ + APE
Sbjct: 128 D---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 935 GYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K T SDV+SYG+V+ EV++ G+ P
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 21/209 (10%)
Query: 765 IVGKGVSGIVY--RVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVR 821
++G G G V R+++P ++ I V + +K G +R F +E +G H NI+
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVA-IKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 822 LLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAYLH 875
L G + +++ +Y+ NGSL L + D R+ +I G+ G+ YL
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKN------DGRFTVIQLVGMLRGIGSGMKYLS 133
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXXXXXXXXXYGYIAPEY 934
+HRD+ + NILV ++DFG++++ + APE
Sbjct: 134 D---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 935 GYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K T SDV+SYG+V+ EV++ G+ P
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G + L + F D I +A+ L+Y H V IH
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 136
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 137 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEA 213
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 89/186 (47%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +Y+
Sbjct: 41 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 97
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L + K +D + + G+ YL IHR++ + NILV +
Sbjct: 98 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRV 154
Query: 901 FLADFGLAKLFXXXXXXXXXXXXXXX-YGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 155 KIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 214
Query: 960 KEPTDS 965
E + S
Sbjct: 215 IEKSKS 220
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 118/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 80
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y+S GSL L E +L + +A G+AY+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+ + NILVG +ADFGLA+L + APE + T K
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 195
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 196 SDVWSFGILLTEL-----TTKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 239
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 240 CPESLHDLMCQ--CWRKDPEERPTFEYLQAFLED 271
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 157
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 158 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 213
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEA 234
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide
Inhibitor
Length = 333
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 48/278 (17%)
Query: 785 IAVKKLWPVKNGELPERDQFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISNGS 843
+AVK L + + E++ +E++ + + +H+NIV LLG C +G L++ +Y G
Sbjct: 79 VAVKMLKSTAHAD--EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 844 LAGLLHEKKVFLDWDSRYKII-------------LGVAHGLAYL-HHDCVPPIIHRDIKS 889
L L K L+ D + I VA G+A+L +C IHRD+ +
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC----IHRDVAA 192
Query: 890 NNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSY 949
N+L+ A + DFGLA+ ++APE + T +SDV+SY
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252
Query: 950 GVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQEML 1008
G++L E+ + G P + VN + + L++ G Q+ +
Sbjct: 253 GILLWEIFSLGLNPYPGIL---------VNSKFYK-------------LVKDGYQMAQPA 290
Query: 1009 ----QVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
+ + C P RPT + + + L+E E+
Sbjct: 291 FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 48/278 (17%)
Query: 785 IAVKKLWPVKNGELPERDQFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISNGS 843
+AVK L + + E++ +E++ + + +H+NIV LLG C +G L++ +Y G
Sbjct: 79 VAVKMLKSTAHAD--EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 844 LAGLLHEKKVFLDWDSRYKII-------------LGVAHGLAYL-HHDCVPPIIHRDIKS 889
L L K L+ D + I VA G+A+L +C IHRD+ +
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAA 192
Query: 890 NNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSY 949
N+L+ A + DFGLA+ ++APE + T +SDV+SY
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252
Query: 950 GVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQEML 1008
G++L E+ + G P + VN + + L++ G Q+ +
Sbjct: 253 GILLWEIFSLGLNPYPGIL---------VNSKFYK-------------LVKDGYQMAQPA 290
Query: 1009 ----QVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
+ + C P RPT + + + L+E E+
Sbjct: 291 FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G + L + F D I +A+ L+Y H V IH
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 136
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 137 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKV 192
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEA 213
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.9 bits (180), Expect = 5e-13, Method: Composition-based stats.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVK---KLWPVKNGELPERDQFSA---EVQT 810
T L ++G GV G V++ V IP + I + K+ K+G R F A +
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG----RQSFQAVTDHMLA 68
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+GS+ H +IVRLLG C G + L+ Y+ GSL + + + + L+W +
Sbjct: 69 IGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ---- 123
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+A G+ YL ++HR++ + N+L+ + +ADFG+A L
Sbjct: 124 --IAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 178
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
++A E + K T +SDV+SYGV + E++T G EP
Sbjct: 179 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 75/274 (27%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 77
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y++ GSL L E +L + +A G+AY+ +
Sbjct: 78 VVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYV 133
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 192
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 193 SDVWSFGILLTEL-----TTKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 236
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 237 CPESLHDLMCQ--CWRKEPEERPTFEYLQAFLED 268
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVK---KLWPVKNGELPERDQFSA---EVQT 810
T L ++G GV G V++ V IP + I + K+ K+G R F A +
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG----RQSFQAVTDHMLA 86
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+GS+ H +IVRLLG C G + L+ Y+ GSL + + + + L+W +
Sbjct: 87 IGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ---- 141
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+A G+ YL ++HR++ + N+L+ + +ADFG+A L
Sbjct: 142 --IAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 196
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
++A E + K T +SDV+SYGV + E++T G EP
Sbjct: 197 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 89/186 (47%), Gaps = 9/186 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYIS 840
+V+AVKKL L RD F E++ L S++H NIV+ G C + GR L L+ +Y+
Sbjct: 43 EVVAVKKLQHSTEEHL--RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
GSL L +D + + G+ YL IHRD+ + NILV +
Sbjct: 100 YGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 156
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
+ DFGL K+ + APE K + SDV+S+GVVL E+ T
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 216
Query: 960 KEPTDS 965
E + S
Sbjct: 217 IEKSKS 222
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 131
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 132 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 187
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEA 208
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 157
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 158 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKV 213
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEA 234
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 73.2 bits (178), Expect = 7e-13, Method: Composition-based stats.
Identities = 75/274 (27%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 77
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y++ GSL L E +L + +A G+AY+ +
Sbjct: 78 VVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYV 133
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPI-KWTAPEAALYGRFTIK 192
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 193 SDVWSFGILLTEL-----TTKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 236
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 237 CPESLHDLMCQ--CWRKEPEERPTFEYLQAFLED 268
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 148
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 149 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 204
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 205 DLWSLGVLCYEFLVGKPPFEA 225
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 132
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 133 RDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKV 188
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEA 209
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 73.2 bits (178), Expect = 7e-13, Method: Composition-based stats.
Identities = 75/274 (27%), Positives = 118/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V+ +A+K L P G + PE F E Q + +RH+ +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPE--AFLQEAQVMKKLRHEKLVQLYA 80
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH-EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y+S G L L E +L + +A G+AY+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+++ NILVG +ADFGLA+L + APE + T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 195
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E+ T R+P + RE ++R M +
Sbjct: 196 SDVWSFGILLTEL-----TTKGRVPYPGMV-----------NREVLDQVERGYRMPCPPE 239
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L L C PEERPT + + A L++
Sbjct: 240 CPESLHDLMCQ--CWRKDPEERPTFEYLQAFLED 271
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 134
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 135 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEA 211
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 134
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 135 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 190
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEA 211
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 131
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 132 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKV 187
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEA 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 136
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 137 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEA 213
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 136
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 137 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKV 192
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEA 213
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 131
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 132 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEA 208
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 135
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 136 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 192 DLWSLGVLCYEFLVGKPPFEA 212
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 136
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 137 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 192
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEA 213
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In
Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.8 bits (177), Expect = 1e-12, Method: Composition-based stats.
Identities = 74/273 (27%), Positives = 119/273 (43%), Gaps = 28/273 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G +G V+ +AVK L K G + D F AE + ++H+ +VRL
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSL---KQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 76
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y+ NGSL L + L + + +A G+A++ IH
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+++ NILV +ADFGLA+L + APE T KS
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI-KWTAPEAINYGTFTIKS 191
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
DV+S+G++L E++ T RIP V L R ++R
Sbjct: 192 DVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNLERGYR----------MVRPDNCP 236
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
+E+ Q++ LC PE+RPT + ++L++
Sbjct: 237 EELYQLM---RLCWKERPEDRPTFDYLRSVLED 266
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 131
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 132 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEA 208
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 132
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 133 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKV 188
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEA 209
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 132
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 133 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 188
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEA 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 130
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 131 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 186
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 187 DLWSLGVLCYEFLVGKPPFEA 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 131
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 132 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKV 187
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEA 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 133
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 134 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 189
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEA 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 131
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 132 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEA 208
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 134
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 135 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEA 211
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 134
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 135 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKV 190
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEA 211
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRVEIPSRQ-VIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY R+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 128
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 129 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 184
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 185 DLWSLGVLCYEFLVGKPPFEA 205
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 131
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 132 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 187
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEA 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 134
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 135 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 190
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEA 211
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 766 VGKGVSGIVYRVEIPSR------QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G V++ P ++AVK L + ++ + F E + + NI
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADM--QADFQREAALMAEFDNPNI 112
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFL-------DWDSRYK---------- 862
V+LLG C G+ LLF+Y++ G L L D +R +
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 863 ------IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXX 916
I VA G+AYL +HRD+ + N LVG +ADFGL++
Sbjct: 173 CAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 229
Query: 917 XXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
++ PE + + T +SDV++YGVVL E+ + G +P
Sbjct: 230 YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKKV---IH 131
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +ADFG + Y+ PE EK
Sbjct: 132 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEA 208
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+ +G G V++ ++ + + +AVK ++P+++ + Q EV +L ++H+NI++ +G
Sbjct: 31 VKARGRFGCVWKAQLLN-EYVAVK-IFPIQD---KQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 825 CCNNGRT----RLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDC-- 878
G + L+ + GSL+ L K + W+ I +A GLAYLH D
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGLAYLHEDIPG 143
Query: 879 -----VPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE 933
P I HRDIKS N+L+ A +ADFGLA F Y+APE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 934 Y-----GYSLKITEKSDVYSYGVVLLEV 956
+ + D+Y+ G+VL E+
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 764 NIVGKGVSGIVY--RVEIPSRQ--VIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKN 818
++G G G V +++P ++ +A+K L K+G +R F +E +G H N
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTL---KSGYTEKQRRDFLSEASIMGQFDHPN 95
Query: 819 IVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLA 872
++ L G +++ +++ NGSL L + D ++ +I G+A G+
Sbjct: 96 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN------DGQFTVIQLVGMLRGIAAGMK 149
Query: 873 YLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX---XXXYGY 929
YL +HRD+ + NILV ++DFGL++ +
Sbjct: 150 YLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW 206
Query: 930 IAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
APE K T SDV+SYG+V+ EV++ G+ P
Sbjct: 207 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 750 NFSVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQ-----F 804
N ++ + VG+G G+VY+ + +++A+K++ L D+
Sbjct: 13 NLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRI------RLDAEDEGIPSTA 66
Query: 805 SAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII 864
E+ L + H NIV L+ ++ R L+F+++ L +L E K L DS+ KI
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ-DSQIKIY 124
Query: 865 L-GVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
L + G+A+ H I+HRD+K N+L+ LADFGLA+ F
Sbjct: 125 LYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV 181
Query: 924 XXXYGYIAPEYGY-SLKITEKSDVYSYGVVLLEVLTGK 960
Y AP+ S K + D++S G + E++TGK
Sbjct: 182 TLWYR--APDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 750 NFSVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQ-----F 804
N ++ + VG+G G+VY+ + +++A+K++ L D+
Sbjct: 13 NLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRI------RLDAEDEGIPSTA 66
Query: 805 SAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII 864
E+ L + H NIV L+ ++ R L+F+++ L +L E K L DS+ KI
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ-DSQIKIY 124
Query: 865 L-GVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
L + G+A+ H I+HRD+K N+L+ LADFGLA+ F
Sbjct: 125 LYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV 181
Query: 924 XXXYGYIAPEYGY-SLKITEKSDVYSYGVVLLEVLTGK 960
Y AP+ S K + D++S G + E++TGK
Sbjct: 182 TLWYR--APDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 28/273 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ +AVK L K G + D F AE + ++H+ +VRL
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 85
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y+ NGSL L + L + + +A G+A++ IH
Sbjct: 86 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 141
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+++ NILV +ADFGLA+L + APE T KS
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKS 200
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
DV+S+G++L E++ T RIP V L R ++R
Sbjct: 201 DVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNLERGYR----------MVRPDNCP 245
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
+E+ Q++ LC PE+RPT + ++L++
Sbjct: 246 EELYQLM---RLCWKERPEDRPTFDYLRSVLED 275
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 765 IVGKGVSGIVY--RVEIPSRQVIAVK-KLWPVKNGELPERDQFSAEVQTLGSIRHKNIVR 821
++G G G V R+++P ++ + V K V E RD F E +G H NI+
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIH 87
Query: 822 LLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAYLH 875
L G + +++ +Y+ NGSL L + D ++ +I G++ G+ YL
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKN------DGQFTVIQLVGMLRGISAGMKYLS 141
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX-XXXXXXXXXXXXYGYIAPEY 934
+HRD+ + NIL+ ++DFGL+++ + APE
Sbjct: 142 D---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA 198
Query: 935 GYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K T SDV+SYG+V+ EV++ G+ P
Sbjct: 199 IAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 28/273 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ +AVK L K G + D F AE + ++H+ +VRL
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 76
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y+ NGSL L + L + + +A G+A++ IH
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+++ NILV +ADFGLA+L + APE T KS
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKS 191
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
DV+S+G++L E++ T RIP V L R ++R
Sbjct: 192 DVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNLERGYR----------MVRPDNCP 236
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
+E+ Q++ LC PE+RPT + ++L++
Sbjct: 237 EELYQLM---RLCWKERPEDRPTFDYLRSVLED 266
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 28/273 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ +AVK L K G + D F AE + ++H+ +VRL
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 76
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y+ NGSL L + L + + +A G+A++ IH
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+++ NILV +ADFGLA+L + APE T KS
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKS 191
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
DV+S+G++L E++ T RIP V L R ++R
Sbjct: 192 DVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNLERGYR----------MVRPDNCP 236
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
+E+ Q++ LC PE+RPT + ++L++
Sbjct: 237 EELYQLM---RLCWKERPEDRPTFDYLRSVLED 266
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 28/273 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ +AVK L K G + D F AE + ++H+ +VRL
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 84
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y+ NGSL L + L + + +A G+A++ IH
Sbjct: 85 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 140
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+++ NILV +ADFGLA+L + APE T KS
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKS 199
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
DV+S+G++L E++ T RIP V L R ++R
Sbjct: 200 DVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNLERGYR----------MVRPDNCP 244
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
+E+ Q++ LC PE+RPT + ++L++
Sbjct: 245 EELYQLM---RLCWKERPEDRPTFDYLRSVLED 274
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
Length = 285
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 28/273 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ +AVK L K G + D F AE + ++H+ +VRL
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 82
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y+ NGSL L + L + + +A G+A++ IH
Sbjct: 83 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 138
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+++ NILV +ADFGLA+L + APE T KS
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKS 197
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
DV+S+G++L E++ T RIP V L R ++R
Sbjct: 198 DVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNLERGYR----------MVRPDNCP 242
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
+E+ Q++ LC PE+RPT + ++L++
Sbjct: 243 EELYQLM---RLCWKERPEDRPTFDYLRSVLED 272
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 28/273 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ +AVK L K G + D F AE + ++H+ +VRL
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 77
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y+ NGSL L + L + + +A G+A++ IH
Sbjct: 78 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 133
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+++ NILV +ADFGLA+L + APE T KS
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKS 192
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
DV+S+G++L E++ T RIP V L R ++R
Sbjct: 193 DVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNLERGYR----------MVRPDNCP 237
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
+E+ Q++ LC PE+RPT + ++L++
Sbjct: 238 EELYQLM---RLCWKERPEDRPTFDYLRSVLED 267
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 28/273 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ +AVK L K G + D F AE + ++H+ +VRL
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 78
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y+ NGSL L + L + + +A G+A++ IH
Sbjct: 79 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 134
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+++ NILV +ADFGLA+L + APE T KS
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKS 193
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
DV+S+G++L E++ T RIP V L R ++R
Sbjct: 194 DVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNLERGYR----------MVRPDNCP 238
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
+E+ Q++ LC PE+RPT + ++L++
Sbjct: 239 EELYQLM---RLCWKERPEDRPTFDYLRSVLED 268
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 133
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +A+FG + Y+ PE EK
Sbjct: 134 RDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 189
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEA 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 73/273 (26%), Positives = 117/273 (42%), Gaps = 28/273 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ +AVK L K G + D F AE + ++H+ +VRL
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 82
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y+ NGSL L + L + + +A G+A++ IH
Sbjct: 83 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 138
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+++ NILV +ADFGLA+L + APE T KS
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKS 197
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
DV+S+G++L E++ T RIP V L R ++R
Sbjct: 198 DVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNLERGYR----------MVRPDNCP 242
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
+E+ Q++ LC PE+RPT + ++L++
Sbjct: 243 EELYQLM---RLCWKERPEDRPTFDYLRSVLED 272
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 73/273 (26%), Positives = 117/273 (42%), Gaps = 28/273 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ +AVK L K G + D F AE + ++H+ +VRL
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 86
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y+ NGSL L + L + + +A G+A++ IH
Sbjct: 87 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 142
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+++ NILV +ADFGLA+L + APE T KS
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKS 201
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
DV+S+G++L E++ T RIP V L R ++R
Sbjct: 202 DVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNLERGYR----------MVRPDNCP 246
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
+E+ Q++ LC PE+RPT + ++L++
Sbjct: 247 EELYQLM---RLCWKERPEDRPTFDYLRSVLED 276
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 73/273 (26%), Positives = 117/273 (42%), Gaps = 28/273 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ +AVK L K G + D F AE + ++H+ +VRL
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 76
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y+ NGSL L + L + + +A G+A++ IH
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+++ NILV +ADFGLA+L + APE T KS
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKS 191
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
DV+S+G++L E++ T RIP V L R ++R
Sbjct: 192 DVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNLERGYR----------MVRPDNCP 236
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
+E+ Q++ LC PE+RPT + ++L++
Sbjct: 237 EELYQLM---RLCWKERPEDRPTFDYLRSVLED 266
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 73/273 (26%), Positives = 117/273 (42%), Gaps = 28/273 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ +AVK L K G + D F AE + ++H+ +VRL
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 71
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y+ NGSL L + L + + +A G+A++ IH
Sbjct: 72 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 127
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+++ NILV +ADFGLA+L + APE T KS
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKS 186
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
DV+S+G++L E++ T RIP V L R ++R
Sbjct: 187 DVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNLERGYR----------MVRPDNCP 231
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
+E+ Q++ LC PE+RPT + ++L++
Sbjct: 232 EELYQLM---RLCWKERPEDRPTFDYLRSVLED 261
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 73/273 (26%), Positives = 117/273 (42%), Gaps = 28/273 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ +AVK L K G + D F AE + ++H+ +VRL
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 81
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y+ NGSL L + L + + +A G+A++ IH
Sbjct: 82 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 137
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+++ NILV +ADFGLA+L + APE T KS
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKS 196
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
DV+S+G++L E++ T RIP V L R ++R
Sbjct: 197 DVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNLERGYR----------MVRPDNCP 241
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
+E+ Q++ LC PE+RPT + ++L++
Sbjct: 242 EELYQLM---RLCWKERPEDRPTFDYLRSVLED 271
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 122/306 (39%), Gaps = 52/306 (16%)
Query: 759 RLSDTNIVGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLG 812
RLS +G G G V ++ + +AVK L P + L ER+ +E++ L
Sbjct: 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKP--SAHLTEREALMSELKVLS 81
Query: 813 SI-RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG----- 866
+ H NIV LLG C G L++ +Y G L L K+ I+
Sbjct: 82 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141
Query: 867 ------------VAHGLAYL-HHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXX 913
VA G+A+L +C IHRD+ + NIL+ + DFGLA+
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN 197
Query: 914 XXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAH 972
++APE ++ T +SDV+SYG+ L E+ + G P D
Sbjct: 198 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-- 255
Query: 973 IITWVNGELRERKREFTTILDRQLLMRSGTQI-QEMLQVLGVALLCVNPCPEERPTMKDV 1031
+F ++ M S EM ++ C + P +RPT K +
Sbjct: 256 --------------KFYKMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQI 298
Query: 1032 TAMLKE 1037
++++
Sbjct: 299 VQLIEK 304
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY E S+ ++A+K L+ + + Q EV+ +RH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ L+ +Y G++ L + F D I +A+ L+Y H V IH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCHSKRV---IH 134
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+L+G E +A+FG + Y+ PE EK
Sbjct: 135 RDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 945 DVYSYGVVLLEVLTGKEPTDS 965
D++S GV+ E L GK P ++
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEA 211
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 125/306 (40%), Gaps = 52/306 (16%)
Query: 759 RLSDTNIVGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLG 812
RLS +G G G V ++ + +AVK L P + L ER+ +E++ L
Sbjct: 47 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKP--SAHLTEREALMSELKVLS 104
Query: 813 SI-RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKII------ 864
+ H NIV LLG C G L++ +Y G L L K+ F+ + I+
Sbjct: 105 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 865 ----------LGVAHGLAYL-HHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXX 913
VA G+A+L +C IHRD+ + NIL+ + DFGLA+
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARHIKN 220
Query: 914 XXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAH 972
++APE ++ T +SDV+SYG+ L E+ + G P D
Sbjct: 221 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-- 278
Query: 973 IITWVNGELRERKREFTTILDRQLLMRSGTQI-QEMLQVLGVALLCVNPCPEERPTMKDV 1031
+F ++ M S EM ++ C + P +RPT K +
Sbjct: 279 --------------KFYKMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQI 321
Query: 1032 TAMLKE 1037
++++
Sbjct: 322 VQLIEK 327
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 122/306 (39%), Gaps = 52/306 (16%)
Query: 759 RLSDTNIVGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLG 812
RLS +G G G V ++ + +AVK L P + L ER+ +E++ L
Sbjct: 40 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKP--SAHLTEREALMSELKVLS 97
Query: 813 SI-RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG----- 866
+ H NIV LLG C G L++ +Y G L L K+ I+
Sbjct: 98 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 157
Query: 867 ------------VAHGLAYL-HHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXX 913
VA G+A+L +C IHRD+ + NIL+ + DFGLA+
Sbjct: 158 LDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN 213
Query: 914 XXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAH 972
++APE ++ T +SDV+SYG+ L E+ + G P D
Sbjct: 214 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-- 271
Query: 973 IITWVNGELRERKREFTTILDRQLLMRSGTQI-QEMLQVLGVALLCVNPCPEERPTMKDV 1031
+F ++ M S EM ++ C + P +RPT K +
Sbjct: 272 --------------KFYKMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQI 314
Query: 1032 TAMLKE 1037
++++
Sbjct: 315 VQLIEK 320
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSA---EVQTLGSIRHKNIVRL 822
+G G G VY+ + +AVK L V P +QF A EV L RH NI+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVD----PTPEQFQAFRNEVAVLRKTRHVNILLF 97
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G ++ + SL LH ++ I A G+ YLH I
Sbjct: 98 MGYMTKDNLAIVT-QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNI 153
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITE 942
IHRD+KSNNI + + DFGLA + ++APE +++ +
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEV---IRMQD 210
Query: 943 ------KSDVYSYGVVLLEVLTGKEP 962
+SDVYSYG+VL E++TG+ P
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 125/306 (40%), Gaps = 52/306 (16%)
Query: 759 RLSDTNIVGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLG 812
RLS +G G G V ++ + +AVK L P + L ER+ +E++ L
Sbjct: 47 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKP--SAHLTEREALMSELKVLS 104
Query: 813 SI-RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKII------ 864
+ H NIV LLG C G L++ +Y G L L K+ F+ + I+
Sbjct: 105 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 865 ----------LGVAHGLAYL-HHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXX 913
VA G+A+L +C IHRD+ + NIL+ + DFGLA+
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN 220
Query: 914 XXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAH 972
++APE ++ T +SDV+SYG+ L E+ + G P D
Sbjct: 221 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-- 278
Query: 973 IITWVNGELRERKREFTTILDRQLLMRSGTQI-QEMLQVLGVALLCVNPCPEERPTMKDV 1031
+F ++ M S EM ++ C + P +RPT K +
Sbjct: 279 --------------KFYKMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQI 321
Query: 1032 TAMLKE 1037
++++
Sbjct: 322 VQLIEK 327
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 125/306 (40%), Gaps = 52/306 (16%)
Query: 759 RLSDTNIVGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLG 812
RLS +G G G V ++ + +AVK L P + L ER+ +E++ L
Sbjct: 42 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKP--SAHLTEREALMSELKVLS 99
Query: 813 SI-RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKII------ 864
+ H NIV LLG C G L++ +Y G L L K+ F+ + I+
Sbjct: 100 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 159
Query: 865 ----------LGVAHGLAYL-HHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXX 913
VA G+A+L +C IHRD+ + NIL+ + DFGLA+
Sbjct: 160 LDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN 215
Query: 914 XXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAH 972
++APE ++ T +SDV+SYG+ L E+ + G P D
Sbjct: 216 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-- 273
Query: 973 IITWVNGELRERKREFTTILDRQLLMRSGTQI-QEMLQVLGVALLCVNPCPEERPTMKDV 1031
+F ++ M S EM ++ C + P +RPT K +
Sbjct: 274 --------------KFYKMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQI 316
Query: 1032 TAMLKE 1037
++++
Sbjct: 317 VQLIEK 322
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 12/210 (5%)
Query: 760 LSDTNI---VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIR 815
L D +I +GKG G VY E S+ ++A+K L+ + + Q EV+ +R
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 816 HKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
H NI+RL G ++ L+ +Y G++ L + F D I +A+ L+Y H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALSYCH 129
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V IHRDIK N+L+G E +ADFG + Y+ PE
Sbjct: 130 SKRV---IHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 182
Query: 936 YSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
EK D++S GV+ E L G P ++
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPPFEA 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 63/278 (22%), Positives = 119/278 (42%), Gaps = 28/278 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G+V + + +A+K +K G + E D+F E + + ++ H+ +V+L G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKM---IKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
C R ++ +Y++NG L L E + ++ V + YL +HR
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSD 945
D+ + N LV Q ++DFGL++ + + PE K + KSD
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 946 VYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
++++GV++ E+ + GK P + + N E E + + L
Sbjct: 189 IWAFGVLMWEIYSLGKMPYER----------FTNSETAEHIAQGLRLYRPHLASE----- 233
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
+V + C + +ERPT K + + + ++ EN
Sbjct: 234 ----KVYTIMYSCWHEKADERPTFKILLSNILDVMDEN 267
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 44/274 (16%)
Query: 785 IAVKKLWPVKNGELPERDQFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISNGS 843
+AVK L + + E++ +E++ + + +H+NIV LLG C +G L++ +Y G
Sbjct: 71 VAVKMLKSTAHAD--EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 128
Query: 844 LAGLLHEK-KVFLDWDSRYKIIL--------GVAHGLAYL-HHDCVPPIIHRDIKSNNIL 893
L L K + LD + + L VA G+A+L +C IHRD+ + N+L
Sbjct: 129 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVL 184
Query: 894 VGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVL 953
+ A + DFGLA+ ++APE + T +SDV+SYG++L
Sbjct: 185 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 244
Query: 954 LEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQEML---- 1008
E+ + G P + VN + + L++ G Q+ +
Sbjct: 245 WEIFSLGLNPYPGIL---------VNSKFYK-------------LVKDGYQMAQPAFAPK 282
Query: 1009 QVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
+ + C P RPT + + + L+E E+
Sbjct: 283 NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 316
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 12/210 (5%)
Query: 760 LSDTNI---VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIR 815
L D +I +GKG G VY E S+ ++A+K L+ + + Q EV+ +R
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 816 HKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
H NI+RL G ++ L+ +Y G++ L + F D I +A+ L+Y H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALSYCH 129
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V IHRDIK N+L+G E +ADFG + Y+ PE
Sbjct: 130 SKRV---IHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMI 182
Query: 936 YSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
EK D++S GV+ E L G P ++
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPPFEA 212
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G+V + + +A+K +K G + E D+F E + + ++ H+ +V+L G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKM---IKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
C R ++ +Y++NG L L E + ++ V + YL +HR
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSD 945
D+ + N LV Q ++DFGL++ + + PE K + KSD
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSR-YVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 946 VYSYGVVLLEVLT-GKEP 962
++++GV++ E+ + GK P
Sbjct: 204 IWAFGVLMWEIYSLGKMP 221
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G+V + + +A+K +K G + E D+F E + + ++ H+ +V+L G
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKM---IKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
C R ++ +Y++NG L L E + ++ V + YL +HR
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 135
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSD 945
D+ + N LV Q ++DFGL++ + + PE K + KSD
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 194
Query: 946 VYSYGVVLLEVLT-GKEP 962
++++GV++ E+ + GK P
Sbjct: 195 IWAFGVLMWEIYSLGKMP 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G+V + + +A+K +K G + E D+F E + + ++ H+ +V+L G
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKM---IKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
C R ++ +Y++NG L L E + ++ V + YL +HR
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 128
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSD 945
D+ + N LV Q ++DFGL++ + + PE K + KSD
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 187
Query: 946 VYSYGVVLLEVLT-GKEP 962
++++GV++ E+ + GK P
Sbjct: 188 IWAFGVLMWEIYSLGKMP 205
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G+V + + +A+K +K G + E D+F E + + ++ H+ +V+L G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKM---IKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
C R ++ +Y++NG L L E + ++ V + YL +HR
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSD 945
D+ + N LV Q ++DFGL++ + + PE K + KSD
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 946 VYSYGVVLLEVLT-GKEP 962
++++GV++ E+ + GK P
Sbjct: 204 IWAFGVLMWEIYSLGKMP 221
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G+V + + +A+K +K G + E D+F E + + ++ H+ +V+L G
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKM---IKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
C R ++ +Y++NG L L E + ++ V + YL +HR
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 124
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSD 945
D+ + N LV Q ++DFGL++ + + PE K + KSD
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 183
Query: 946 VYSYGVVLLEVLT-GKEP 962
++++GV++ E+ + GK P
Sbjct: 184 IWAFGVLMWEIYSLGKMP 201
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G+V + + +A+K +K G + E D+F E + + ++ H+ +V+L G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKM---IKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
C R ++ +Y++NG L L E + ++ V + YL +HR
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSD 945
D+ + N LV Q ++DFGL++ + + PE K + KSD
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 946 VYSYGVVLLEVLT-GKEP 962
++++GV++ E+ + GK P
Sbjct: 189 IWAFGVLMWEIYSLGKMP 206
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 28/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ +AVK L K G + D F AE + ++H+ +VRL
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 72
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y+ NGSL L + L + + +A G+A++ IH
Sbjct: 73 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IH 128
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
R++++ NILV +ADFGLA+L + APE T KS
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKS 187
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
DV+S+G++L E++ T RIP V L R ++R
Sbjct: 188 DVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNLERGYR----------MVRPDNCP 232
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
+E+ Q++ LC PE+RPT + ++L++
Sbjct: 233 EELYQLMR---LCWKERPEDRPTFDYLRSVLEDF 263
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 44/274 (16%)
Query: 785 IAVKKLWPVKNGELPERDQFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISNGS 843
+AVK L + + E++ +E++ + + +H+NIV LLG C +G L++ +Y G
Sbjct: 79 VAVKMLKSTAHAD--EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 844 LAGLLHEK-KVFLDWDSRYKIIL--------GVAHGLAYL-HHDCVPPIIHRDIKSNNIL 893
L L K + LD + + L VA G+A+L +C IHRD+ + N+L
Sbjct: 137 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVL 192
Query: 894 VGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVL 953
+ A + DFGLA+ ++APE + T +SDV+SYG++L
Sbjct: 193 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 252
Query: 954 LEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQEML---- 1008
E+ + G P + VN + + L++ G Q+ +
Sbjct: 253 WEIFSLGLNPYPGIL---------VNSKFYK-------------LVKDGYQMAQPAFAPK 290
Query: 1009 QVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
+ + C P RPT + + + L+E E+
Sbjct: 291 NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 324
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 101/222 (45%), Gaps = 44/222 (19%)
Query: 762 DTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQ-----FSAEVQTLGSIR 815
D ++GKG GIVY S QV IA+K E+PERD E+ ++
Sbjct: 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIK--------EIPERDSRYSQPLHEEIALHKHLK 77
Query: 816 HKNIVRLLGC-CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDW----DSRYKI---ILGV 867
HKNIV+ LG NG ++ + + + GSL+ LL K W D+ I +
Sbjct: 78 HKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRSK-----WGPLKDNEQTIGFYTKQI 131
Query: 868 AHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXX 926
GL YLH + I+HRDIK +N+L+ ++DFG +K
Sbjct: 132 LEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQ 188
Query: 927 YGYIAPE------YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE GY + +D++S G ++E+ TGK P
Sbjct: 189 --YMAPEIIDKGPRGYG----KAADIWSLGCTIIEMATGKPP 224
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 66/278 (23%), Positives = 115/278 (41%), Gaps = 48/278 (17%)
Query: 785 IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSL 844
+AVK L +N E +E L + H ++++L G C+ LL+ +Y GSL
Sbjct: 56 VAVKML--KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 845 AGLLHEKK---------------VFLDWDSRYKIILG--------VAHGLAYLHHDCVPP 881
G L E + LD + +G ++ G+ YL
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MS 170
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
++HRD+ + NILV + ++DFGL++ ++A E + T
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 942 EKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRS 1000
+SDV+S+GV+L E++T G P P+ R F + + R
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPE----------------RLFNLLKTGHRMERP 274
Query: 1001 GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
+EM +++ L C P++RP D++ L+++
Sbjct: 275 DNCSEEMYRLM---LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 66/278 (23%), Positives = 115/278 (41%), Gaps = 48/278 (17%)
Query: 785 IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSL 844
+AVK L +N E +E L + H ++++L G C+ LL+ +Y GSL
Sbjct: 56 VAVKML--KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 845 AGLLHEKK---------------VFLDWDSRYKIILG--------VAHGLAYLHHDCVPP 881
G L E + LD + +G ++ G+ YL
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MK 170
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
++HRD+ + NILV + ++DFGL++ ++A E + T
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 942 EKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRS 1000
+SDV+S+GV+L E++T G P P+ R F + + R
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPE----------------RLFNLLKTGHRMERP 274
Query: 1001 GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
+EM +++ L C P++RP D++ L+++
Sbjct: 275 DNCSEEMYRLM---LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 88/203 (43%), Gaps = 16/203 (7%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSA---EVQTLGSIRHKNIVRL 822
+G G G VY+ + +AVK L N P Q A EV L RH NI+
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKML----NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 73
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G + ++ + SL LH + + I A G+ YLH I
Sbjct: 74 MGYSTKPQLAIVT-QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSI 129
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE---YGYSLK 939
IHRD+KSNNI + + DFGLA + ++APE S
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
+ +SDVY++G+VL E++TG+ P
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLP 212
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
Length = 314
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 65/278 (23%), Positives = 114/278 (41%), Gaps = 48/278 (17%)
Query: 785 IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSL 844
+AVK L +N E +E L + H ++++L G C+ LL+ +Y GSL
Sbjct: 56 VAVKML--KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 845 AGLLHEKK---------------VFLDWDSRYKIILG--------VAHGLAYLHHDCVPP 881
G L E + LD + +G ++ G+ YL
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MK 170
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
++HRD+ + NILV + ++DFGL++ ++A E + T
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 942 EKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRS 1000
+SDV+S+GV+L E++T G P P+ R F + + R
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPE----------------RLFNLLKTGHRMERP 274
Query: 1001 GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
+EM +++ L C P++RP D++ L+++
Sbjct: 275 DNCSEEMYRLM---LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 36/218 (16%)
Query: 762 DTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQ-----FSAEVQTLGSIR 815
D ++GKG GIVY S QV IA+K E+PERD E+ ++
Sbjct: 12 DRVVLGKGTYGIVYAGRDLSNQVRIAIK--------EIPERDSRYSQPLHEEIALHKHLK 63
Query: 816 HKNIVRLLGC-CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI---ILGVAHGL 871
HKNIV+ LG NG ++ + + + GSL+ LL K L D+ I + GL
Sbjct: 64 HKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLK-DNEQTIGFYTKQILEGL 121
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
YLH + I+HRDIK +N+L+ ++DFG +K Y+
Sbjct: 122 KYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQ--YM 176
Query: 931 APE------YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
APE GY + +D++S G ++E+ TGK P
Sbjct: 177 APEIIDKGPRGYG----KAADIWSLGCTIIEMATGKPP 210
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 112/272 (41%), Gaps = 44/272 (16%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNG 842
Q +A+K L E P R++F E ++H N+V LLG + ++F Y S+G
Sbjct: 57 QAVAIKTL--KDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHG 114
Query: 843 SLAGLL-----HEKKVFLDWDSRYK----------IILGVAHGLAYL--HHDCVPPIIHR 885
L L H D D K ++ +A G+ YL HH ++H+
Sbjct: 115 DLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHK 169
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSD 945
D+ + N+LV + ++D GL + ++APE K + SD
Sbjct: 170 DLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSD 229
Query: 946 VYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
++SYGVVL EV + G +P + N ++ E R +RQ+L
Sbjct: 230 IWSYGVVLWEVFSYGLQP----------YCGYSNQDVVEMIR------NRQVL---PCPD 270
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLK 1036
V + + C N P RP KD+ + L+
Sbjct: 271 DCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 112/272 (41%), Gaps = 44/272 (16%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNG 842
Q +A+K L E P R++F E ++H N+V LLG + ++F Y S+G
Sbjct: 40 QAVAIKTL--KDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHG 97
Query: 843 SLAGLL-----HEKKVFLDWDSRYK----------IILGVAHGLAYL--HHDCVPPIIHR 885
L L H D D K ++ +A G+ YL HH ++H+
Sbjct: 98 DLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHK 152
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSD 945
D+ + N+LV + ++D GL + ++APE K + SD
Sbjct: 153 DLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSD 212
Query: 946 VYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQI 1004
++SYGVVL EV + G +P + N ++ E R +RQ+L
Sbjct: 213 IWSYGVVLWEVFSYGLQP----------YCGYSNQDVVEMIR------NRQVL---PCPD 253
Query: 1005 QEMLQVLGVALLCVNPCPEERPTMKDVTAMLK 1036
V + + C N P RP KD+ + L+
Sbjct: 254 DCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 96/217 (44%), Gaps = 16/217 (7%)
Query: 751 FSVDDVVTRLSDTNIVGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQ 809
F DD SD +G G G VY ++ + +V+A+KK+ + EV+
Sbjct: 47 FFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR 106
Query: 810 TLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAH 869
L +RH N ++ GC T L+ +Y GS + LL K L + G
Sbjct: 107 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQ 165
Query: 870 GLAYLH-HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
GLAYLH H+ +IHRD+K+ NIL+ L DFG A +
Sbjct: 166 GLAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPY------ 215
Query: 929 YIAPEYGYSL---KITEKSDVYSYGVVLLEVLTGKEP 962
++APE ++ + K DV+S G+ +E+ K P
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 804 FSAEVQTLGSIRHKNIVRLLGCCNNGRTRL-LLFDYISNGSLAGLLHEK-KVFLDWDSRY 861
F AE + +RH N+V+LLG + L ++ +Y++ GSL L + + L D
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105
Query: 862 KIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXX 921
K L V + YL + +HRD+ + N+LV A ++DFGL K
Sbjct: 106 KFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQD 157
Query: 922 XXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
+ APE K + KSDV+S+G++L E+ + G+ P RIP
Sbjct: 158 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY-PRIP 204
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 804 FSAEVQTLGSIRHKNIVRLLGCCNNGRTRL-LLFDYISNGSLAGLLHEK-KVFLDWDSRY 861
F AE + +RH N+V+LLG + L ++ +Y++ GSL L + + L D
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 120
Query: 862 KIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXX 921
K L V + YL + +HRD+ + N+LV A ++DFGL K
Sbjct: 121 KFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQD 172
Query: 922 XXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
+ APE K + KSDV+S+G++L E+ + G+ P RIP
Sbjct: 173 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY-PRIP 219
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 764 NIVGKGVSGIVY--RVEIPSRQ--VIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKN 818
++G G G V +++P ++ +A+K L K+G +R F +E +G H N
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTL---KSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 819 IVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLA 872
++ L G +++ +++ NGSL L + D ++ +I G+A G+
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN------DGQFTVIQLVGMLRGIAAGMK 123
Query: 873 YLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX---XXXYGY 929
YL +HR + + NILV ++DFGL++ +
Sbjct: 124 YLAD---MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW 180
Query: 930 IAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
APE K T SDV+SYG+V+ EV++ G+ P
Sbjct: 181 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSA---EVQTLGSIRHKNIVRL 822
+G G G VY+ + +AVK L N P Q A EV L RH NI+
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKML----NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 71
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G + ++ + SL LH + + I A G+ YLH I
Sbjct: 72 MGYSTKPQLAIVT-QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSI 127
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITE 942
IHRD+KSNNI + + DFGLA + ++APE +++ +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 184
Query: 943 K------SDVYSYGVVLLEVLTGKEP 962
K SDVY++G+VL E++TG+ P
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSA---EVQTLGSIRHKNIVRL 822
+G G G VY+ + +AVK L N P Q A EV L RH NI+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKML----NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G + ++ + SL LH + + I A G+ YLH I
Sbjct: 75 MGYSTKPQLAIVT-QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSI 130
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITE 942
IHRD+KSNNI + + DFGLA + ++APE +++ +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 187
Query: 943 K------SDVYSYGVVLLEVLTGKEP 962
K SDVY++G+VL E++TG+ P
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSA---EVQTLGSIRHKNIVRL 822
+G G G VY+ + +AVK L N P Q A EV L RH NI+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKML----NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G + ++ + SL LH + + I A G+ YLH I
Sbjct: 75 MGYSTKPQLAIVT-QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSI 130
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITE 942
IHRD+KSNNI + + DFGLA + ++APE +++ +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 187
Query: 943 K------SDVYSYGVVLLEVLTGKEP 962
K SDVY++G+VL E++TG+ P
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSA---EVQTLGSIRHKNIVRL 822
+G G G VY+ + +AVK L N P Q A EV L RH NI+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKML----NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G + ++ + SL LH + + I A G+ YLH I
Sbjct: 70 MGYSTKPQLAIVT-QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSI 125
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITE 942
IHRD+KSNNI + + DFGLA + ++APE +++ +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 182
Query: 943 K------SDVYSYGVVLLEVLTGKEP 962
K SDVY++G+VL E++TG+ P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSA---EVQTLGSIRHKNIVRL 822
+G G G VY+ + +AVK L N P Q A EV L RH NI+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKML----NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G + ++ + SL LH + + I A G+ YLH I
Sbjct: 98 MGYSTKPQLAIVT-QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSI 153
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITE 942
IHRD+KSNNI + + DFGLA + ++APE +++ +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 210
Query: 943 K------SDVYSYGVVLLEVLTGKEP 962
K SDVY++G+VL E++TG+ P
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSA---EVQTLGSIRHKNIVRL 822
+G G G VY+ + +AVK L N P Q A EV L RH NI+
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKML----NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 96
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G + ++ + SL LH + + I A G+ YLH I
Sbjct: 97 MGYSTKPQLAIVT-QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSI 152
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITE 942
IHRD+KSNNI + + DFGLA + ++APE +++ +
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 209
Query: 943 K------SDVYSYGVVLLEVLTGKEP 962
K SDVY++G+VL E++TG+ P
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 64/217 (29%), Positives = 96/217 (44%), Gaps = 16/217 (7%)
Query: 751 FSVDDVVTRLSDTNIVGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQ 809
F DD SD +G G G VY ++ + +V+A+KK+ + EV+
Sbjct: 8 FFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR 67
Query: 810 TLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAH 869
L +RH N ++ GC T L+ +Y GS + LL K L + G
Sbjct: 68 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQ 126
Query: 870 GLAYLH-HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
GLAYLH H+ +IHRD+K+ NIL+ L DFG A +
Sbjct: 127 GLAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPY------ 176
Query: 929 YIAPEYGYSL---KITEKSDVYSYGVVLLEVLTGKEP 962
++APE ++ + K DV+S G+ +E+ K P
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 28/221 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 74
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L++ + G L + E K L+W
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 127
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 128 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTD 964
++A E T +SDV+SYGV + E++T G +P D
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSA---EVQTLGSIRHKNIVRL 822
+G G G VY+ + +AVK L N P Q A EV L RH NI+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKML----NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G + ++ + SL LH + + I A G+ YLH I
Sbjct: 86 MGYSTKPQLAIVT-QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSI 141
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE---YGYSLK 939
IHRD+KSNNI + + DFGLA ++APE S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
+ +SDVY++G+VL E++TG+ P
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLP 224
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 11/249 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQT 810
SV D + + +G+G SG VY +++ + Q +A++++ + P+++ E+
Sbjct: 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILV 70
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHG 870
+ ++ NIV L G ++ +Y++ GSL ++ E +D +
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQA 128
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L +LH + V IHRDIKS+NIL+G L DFG ++
Sbjct: 129 LEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY--WM 183
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTT 990
APE K D++S G++ +E++ G+ P + P A + NG + E +
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243
Query: 991 ILDRQLLMR 999
+ R L R
Sbjct: 244 AIFRDFLNR 252
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSA---EVQTLGSIRHKNIVRL 822
+G G G VY+ + +AVK L N P Q A EV L RH NI+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKML----NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G + ++ + SL LH + + I A G+ YLH I
Sbjct: 70 MGYSTAPQLAIVT-QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSI 125
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITE 942
IHRD+KSNNI + + DFGLA + ++APE +++ +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 182
Query: 943 K------SDVYSYGVVLLEVLTGKEP 962
K SDVY++G+VL E++TG+ P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
Length = 341
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 82/298 (27%), Positives = 129/298 (43%), Gaps = 36/298 (12%)
Query: 766 VGKGVSGIVYRVE--IPSRQVI--AVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVR 821
+G G G+V R E PS + + AVK L P + D F EV + S+ H+N++R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 822 LLGCCNNGRTRLLLFDYISNGSLAGLL--HEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
L G +++ + GSL L H+ L SRY + VA G+ YL
Sbjct: 80 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 134
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
IHRD+ + N+L+ + + DFGL + L + + APE +
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 939 KITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLL 997
+ SD + +GV L E+ T G+EP +G+ I+ ++ E ER L
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPWIGL--NGSQILHKIDKE-GER------------L 238
Query: 998 MRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN----DDLEKPNSL 1051
R Q++ V+ + C PE+RPT + L E + + D E+P+ L
Sbjct: 239 PRPEDCPQDIYNVM---VQCWAHKPEDRPTFVALRDFLLEAQPTDMRALQDFEEPDKL 293
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 11/249 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQT 810
SV D + + +G+G SG VY +++ + Q +A++++ + P+++ E+
Sbjct: 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILV 70
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHG 870
+ ++ NIV L G ++ +Y++ GSL ++ E +D +
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQA 128
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L +LH + V IHRDIKS+NIL+G L DFG ++
Sbjct: 129 LEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPY--WM 183
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTT 990
APE K D++S G++ +E++ G+ P + P A + NG + E +
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243
Query: 991 ILDRQLLMR 999
+ R L R
Sbjct: 244 AIFRDFLNR 252
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 11/249 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQT 810
SV D + + +G+G SG VY +++ + Q +A++++ + P+++ E+
Sbjct: 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILV 70
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHG 870
+ ++ NIV L G ++ +Y++ GSL ++ E +D +
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQA 128
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L +LH + V IHRDIKS+NIL+G L DFG ++
Sbjct: 129 LEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPY--WM 183
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTT 990
APE K D++S G++ +E++ G+ P + P A + NG + E +
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243
Query: 991 ILDRQLLMR 999
+ R L R
Sbjct: 244 AIFRDFLNR 252
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 804 FSAEVQTLGSIRHKNIVRLLGCCNNGRTRL-LLFDYISNGSLAGLLHEK-KVFLDWDSRY 861
F AE + +RH N+V+LLG + L ++ +Y++ GSL L + + L D
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 292
Query: 862 KIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXX 921
K L V + YL + +HRD+ + N+LV A ++DFGL K
Sbjct: 293 KFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQD 344
Query: 922 XXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIP 968
+ APE K + KSDV+S+G++L E+ + RIP
Sbjct: 345 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 11/249 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQT 810
SV D + + +G+G SG VY +++ + Q +A++++ + P+++ E+
Sbjct: 15 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILV 71
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHG 870
+ ++ NIV L G ++ +Y++ GSL ++ E +D +
Sbjct: 72 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQA 129
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L +LH + V IHRDIKS+NIL+G L DFG ++
Sbjct: 130 LEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPY--WM 184
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTT 990
APE K D++S G++ +E++ G+ P + P A + NG + E +
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 244
Query: 991 ILDRQLLMR 999
+ R L R
Sbjct: 245 AIFRDFLNR 253
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 12/168 (7%)
Query: 804 FSAEVQTLGSIRHKNIVRLLGCCNNGRTRL-LLFDYISNGSLAGLLHEK-KVFLDWDSRY 861
F AE + +RH N+V+LLG + L ++ +Y++ GSL L + + L D
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 111
Query: 862 KIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXX 921
K L V + YL + +HRD+ + N+LV A ++DFGL K
Sbjct: 112 KFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQD 163
Query: 922 XXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
+ APE + KSDV+S+G++L E+ + G+ P RIP
Sbjct: 164 TGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY-PRIP 210
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 766 VGKGVSGIVYRVEI------PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G G G VY ++ PS +AVK L P E E D F E + + H+NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELD-FLMEALIISKLNHQNI 110
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAY 873
VR +G R +L + ++ G L L E + S ++ +A G Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 874 LHHDCVPPIIHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L + IHRDI + N L+ GP A + DFG+A+ ++
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
PE T K+D +S+GV+L E+ + G P S+
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 264
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSA---EVQTLGSIRHKNIVRL 822
+G G G VY+ + +AVK L N P Q A EV L RH NI+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKML----NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G + ++ + SL LH + + I A G+ YLH I
Sbjct: 70 MGYSTKPQLAIVT-QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSI 125
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITE 942
IHRD+KSNNI + + DFGLA ++APE +++ +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 182
Query: 943 K------SDVYSYGVVLLEVLTGKEP 962
K SDVY++G+VL E++TG+ P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSA---EVQTLGSIRHKNIVRL 822
+G G G VY+ + +AVK L N P Q A EV L RH NI+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKML----NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G + ++ + SL LH + + I A G+ YLH I
Sbjct: 86 MGYSTAPQLAIVT-QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSI 141
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE---YGYSLK 939
IHRD+KSNNI + + DFGLA ++APE S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
+ +SDVY++G+VL E++TG+ P
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSA---EVQTLGSIRHKNIVRL 822
+G G G VY+ + +AVK L N P Q A EV L RH NI+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKML----NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G + ++ + SL LH + + I A G+ YLH I
Sbjct: 98 MGYSTKPQLAIVT-QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSI 153
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITE 942
IHRD+KSNNI + + DFGLA ++APE +++ +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 210
Query: 943 K------SDVYSYGVVLLEVLTGKEP 962
K SDVY++G+VL E++TG+ P
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 766 VGKGVSGIVYRVEI------PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G G G VY ++ PS +AVK L P E E D F E + + H+NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELD-FLMEALIISKLNHQNI 96
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAY 873
VR +G R +L + ++ G L L E + S ++ +A G Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 874 LHHDCVPPIIHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L + IHRDI + N L+ GP A + DFG+A+ ++
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
PE T K+D +S+GV+L E+ + G P S+
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 250
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSA---EVQTLGSIRHKNIVRL 822
+G G G VY+ + +AVK L N P Q A EV L RH NI+
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKML----NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 89
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G + ++ + SL LH + + I A G+ YLH I
Sbjct: 90 MGYSTKPQLAIVT-QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSI 145
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITE 942
IHRD+KSNNI + + DFGLA ++APE +++ +
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 202
Query: 943 K------SDVYSYGVVLLEVLTGKEP 962
K SDVY++G+VL E++TG+ P
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 16/226 (7%)
Query: 745 PFQKLNFSVDDVVTRLSDTNIVGKGVSGIVYRVE--IPSRQVI--AVKKLWPVKNGELPE 800
P Q L + + RL + +G G G+V R E PS + + AVK L P +
Sbjct: 7 PLQSLTCLIGEKDLRLLEK--LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA 64
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLL--HEKKVFLDWD 858
D F EV + S+ H+N++RL G +++ + GSL L H+ L
Sbjct: 65 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTL 123
Query: 859 SRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXX 917
SRY + VA G+ YL IHRD+ + N+L+ + + DFGL + L
Sbjct: 124 SRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX 178
Query: 918 XXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ + APE + + SD + +GV L E+ T G+EP
Sbjct: 179 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An Arylamide
Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 119/286 (41%), Gaps = 62/286 (21%)
Query: 785 IAVKKLWPVKNGELPERDQFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISNGS 843
+AVK L + + E++ +E++ + + +H+NIV LLG C +G L++ +Y G
Sbjct: 79 VAVKMLKSTAHAD--EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 844 LAGLLHEKKV---------------------FLDWDSRYKIILGVAHGLAYL-HHDCVPP 881
L L K+ L + S+ VA G+A+L +C
Sbjct: 137 LLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQ------VAQGMAFLASKNC--- 187
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
IHRD+ + N+L+ A + DFGLA+ ++APE + T
Sbjct: 188 -IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 246
Query: 942 EKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRS 1000
+SDV+SYG++L E+ + G P + VN + + L++
Sbjct: 247 VQSDVWSYGILLWEIFSLGLNPYPGIL---------VNSKFYK-------------LVKD 284
Query: 1001 GTQIQEML----QVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
G Q+ + + + C P RPT + + + L+E E+
Sbjct: 285 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 330
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 766 VGKGVSGIVYRVEI------PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G G G VY ++ PS +AVK L P E E D F E + H+NI
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNI 95
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAY 873
VR +G R +L + ++ G L L E + S ++ +A G Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 874 LHHDCVPPIIHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L + IHRDI + N L+ GP A + DFG+A+ ++
Sbjct: 156 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
PE T K+D +S+GV+L E+ + G P S+
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 249
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 66/226 (29%), Positives = 101/226 (44%), Gaps = 16/226 (7%)
Query: 745 PFQKLNFSVDDVVTRLSDTNIVGKGVSGIVYRVE--IPSRQVI--AVKKLWPVKNGELPE 800
P Q L + + RL + +G G G+V R E PS + + AVK L P +
Sbjct: 7 PLQSLTCLIGEKDLRLLEK--LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA 64
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLL--HEKKVFLDWD 858
D F EV + S+ H+N++RL G +++ + GSL L H+ L
Sbjct: 65 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTL 123
Query: 859 SRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXX 917
SRY + VA G+ YL IHRD+ + N+L+ + + DFGL + L
Sbjct: 124 SRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 178
Query: 918 XXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ + APE + + SD + +GV L E+ T G+EP
Sbjct: 179 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 31/216 (14%)
Query: 764 NIVGKGVSGIVYRVEIPS---RQVIAVKKLWPVKNGELPERDQFSAEVQTLGSI-RHKNI 819
+++G+G G V + I R A+K++ + + RD F+ E++ L + H NI
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD-DHRD-FAGELEVLCKLGHHPNI 78
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII--------------- 864
+ LLG C + L +Y +G+L L + +V L+ D + I
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV-LETDPAFAIANSTASTLSSQQLLHF 137
Query: 865 -LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
VA G+ YL IHRD+ + NILVG + A +ADFGL++
Sbjct: 138 AADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMG 191
Query: 924 XXXYGYIAPE-YGYSLKITEKSDVYSYGVVLLEVLT 958
++A E YS+ T SDV+SYGV+L E+++
Sbjct: 192 RLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 31/216 (14%)
Query: 764 NIVGKGVSGIVYRVEIPS---RQVIAVKKLWPVKNGELPERDQFSAEVQTLGSI-RHKNI 819
+++G+G G V + I R A+K++ + + RD F+ E++ L + H NI
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD-DHRD-FAGELEVLCKLGHHPNI 88
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII--------------- 864
+ LLG C + L +Y +G+L L + +V L+ D + I
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV-LETDPAFAIANSTASTLSSQQLLHF 147
Query: 865 -LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
VA G+ YL IHRD+ + NILVG + A +ADFGL++
Sbjct: 148 AADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMG 201
Query: 924 XXXYGYIAPE-YGYSLKITEKSDVYSYGVVLLEVLT 958
++A E YS+ T SDV+SYGV+L E+++
Sbjct: 202 RLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVS 236
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 766 VGKGVSGIVYRVEI------PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G G G VY ++ PS +AVK L P E E D F E + H+NI
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNI 87
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAY 873
VR +G R +L + ++ G L L E + S ++ +A G Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 874 LHHDCVPPIIHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L + IHRDI + N L+ GP A + DFG+A+ ++
Sbjct: 148 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 204
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
PE T K+D +S+GV+L E+ + G P S+
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 241
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 28/221 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 72
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 125
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTD 964
++A E T +SDV+SYGV + E++T G +P D
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 766 VGKGVSGIVYRVEI------PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G G G VY ++ PS +AVK L P E E D F E + H+NI
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNI 95
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAY 873
VR +G R +L + ++ G L L E + S ++ +A G Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 874 LHHDCVPPIIHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L + IHRDI + N L+ GP A + DFG+A+ ++
Sbjct: 156 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
PE T K+D +S+GV+L E+ + G P S+
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 249
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 766 VGKGVSGIVYRVEI------PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G G G VY ++ PS +AVK L P E E D F E + H+NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVYSEQDELD-FLMEALIISKFNHQNI 110
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAY 873
VR +G R +L + ++ G L L E + S ++ +A G Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 874 LHHDCVPPIIHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L + IHRDI + N L+ GP A + DFG+A+ ++
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
PE T K+D +S+GV+L E+ + G P S+
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 264
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 766 VGKGVSGIVYRVEI------PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G G G VY ++ PS +AVK L P E E D F E + H+NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNI 96
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAY 873
VR +G R +L + ++ G L L E + S ++ +A G Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 874 LHHDCVPPIIHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L + IHRDI + N L+ GP A + DFG+A+ ++
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
PE T K+D +S+GV+L E+ + G P S+
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 250
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 766 VGKGVSGIVYRVEI------PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G G G VY ++ PS +AVK L P E E D F E + H+NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNI 110
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAY 873
VR +G R +L + ++ G L L E + S ++ +A G Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 874 LHHDCVPPIIHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L + IHRDI + N L+ GP A + DFG+A+ ++
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
PE T K+D +S+GV+L E+ + G P S+
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 264
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 766 VGKGVSGIVYRVEI------PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G G G VY ++ PS +AVK L P E E D F E + H+NI
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNI 112
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAY 873
VR +G R +L + ++ G L L E + S ++ +A G Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 874 LHHDCVPPIIHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L + IHRDI + N L+ GP A + DFG+A+ ++
Sbjct: 173 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 229
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
PE T K+D +S+GV+L E+ + G P S+
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 266
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 766 VGKGVSGIVYRVEI------PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G G G VY ++ PS +AVK L P E E D F E + H+NI
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNI 136
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAY 873
VR +G R +L + ++ G L L E + S ++ +A G Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 874 LHHDCVPPIIHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L + IHRDI + N L+ GP A + DFG+A+ ++
Sbjct: 197 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
PE T K+D +S+GV+L E+ + G P S+
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 290
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 28/221 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIMELREATSPKANKEILDEAYV 104
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 105 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 157
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 158 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 214
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTD 964
++A E T +SDV+SYGV + E++T G +P D
Sbjct: 215 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 766 VGKGVSGIVYRVEI------PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G G G VY ++ PS +AVK L P E E D F E + H+NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNI 96
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAY 873
VR +G R +L + ++ G L L E + S ++ +A G Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 874 LHHDCVPPIIHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L + IHRDI + N L+ GP A + DFG+A+ ++
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWM 213
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
PE T K+D +S+GV+L E+ + G P S+
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 250
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 75/274 (27%), Positives = 118/274 (43%), Gaps = 30/274 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSIRHKNIVRLLG 824
+G G G V+ +A+K L P G + PE F E Q + ++H +V+L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKP---GTMSPE--SFLEEAQIMKKLKHDKLVQLYA 71
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+ ++ +Y++ GSL L + + L + + VA G+AY+ I
Sbjct: 72 VVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYI 127
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD++S NILVG +ADFGLA+L + APE + T K
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPI-KWTAPEAALYGRFTIK 186
Query: 944 SDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQ 1003
SDV+S+G++L E++T R+P RE ++R M
Sbjct: 187 SDVWSFGILLTELVT-----KGRVPYPGM-----------NNREVLEQVERGYRMPCPQD 230
Query: 1004 IQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
L L + C PEERPT + + + L++
Sbjct: 231 CPISLHELMIH--CWKKDPEERPTFEYLQSFLED 262
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 766 VGKGVSGIVYRVEI------PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G G G VY ++ PS +AVK L P E E D F E + H+NI
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNI 102
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAY 873
VR +G R +L + ++ G L L E + S ++ +A G Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 874 LHHDCVPPIIHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L + IHRDI + N L+ GP A + DFG+A+ ++
Sbjct: 163 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 219
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
PE T K+D +S+GV+L E+ + G P S+
Sbjct: 220 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 256
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 33/255 (12%)
Query: 765 IVGKGVSGIVYRVEIPSR----QVIAVKKLWPVKNGELPERDQFSAEVQ--TLGSIRHKN 818
++G+G G V+ V +R + A+K L K L RD+ +++ L + H
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVL---KKATLKVRDRVRTKMERDILADVNHPF 91
Query: 819 IVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDC 878
+V+L L+ D++ G L L ++ +F + D ++ + +A GL +LH
Sbjct: 92 VVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALGLDHLHS-- 148
Query: 879 VPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
II+RD+K NIL+ + L DFGL+K Y+APE
Sbjct: 149 -LGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMAPEVVNRQ 205
Query: 939 KITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLM 998
+ +D +SYGV++ E+LTG P ++RK T IL +L M
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLPFQG----------------KDRKETMTLILKAKLGM 249
Query: 999 RS--GTQIQEMLQVL 1011
T+ Q +L+ L
Sbjct: 250 PQFLSTEAQSLLRAL 264
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 766 VGKGVSGIVYRVEI------PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G G G VY ++ PS +AVK L P E E D F E + H+NI
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNI 113
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAY 873
VR +G R +L + ++ G L L E + S ++ +A G Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 874 LHHDCVPPIIHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L + IHRDI + N L+ GP A + DFG+A+ ++
Sbjct: 174 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
PE T K+D +S+GV+L E+ + G P S+
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 267
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
+ +F E + L H NIVRL+G C + ++ + + G L + L +
Sbjct: 156 KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL 215
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+++ A G+ YL C IHRD+ + N LV + ++DFG+++
Sbjct: 216 LQMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASG 272
Query: 921 XXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT 958
+ APE + + +SDV+S+G++L E +
Sbjct: 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 10/196 (5%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G+VY+ + + A+KK+ K E +P E+ L ++H NIV+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ + +L+F+++ L LL + L+ + +L + +G+AY H V +H
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV---LH 123
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGY-SLKITEK 943
RD+K N+L+ + E +ADFGLA+ F Y AP+ S K +
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYR--APDVLMGSKKYSTT 181
Query: 944 SDVYSYGVVLLEVLTG 959
D++S G + E++ G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 11/249 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQT 810
SV D + + +G+G SG VY +++ + Q +A++++ + P+++ E+
Sbjct: 15 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILV 71
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHG 870
+ ++ NIV L G ++ +Y++ GSL ++ E +D +
Sbjct: 72 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQA 129
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L +LH + V IHR+IKS+NIL+G L DFG ++
Sbjct: 130 LEFLHSNQV---IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY--WM 184
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTT 990
APE K D++S G++ +E++ G+ P + P A + NG + E +
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 244
Query: 991 ILDRQLLMR 999
+ R L R
Sbjct: 245 AIFRDFLNR 253
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 71
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L++ + G L + E K L+W
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW------C 124
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 125 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 225
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC--NNGRTRLLLFDYIS 840
+ +AVK L P G E++ L ++ H+NIV+ G C + G L+ +++
Sbjct: 51 EQVAVKSLKPESGGN--HIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 108
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
+GSL L + K ++ + K + + G+ YL +HRD+ + N+LV + +
Sbjct: 109 SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQV 165
Query: 901 FLADFGLAKLFXXXXXXXXXXXXXXX-YGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT 958
+ DFGL K + APE K SDV+S+GV L E+LT
Sbjct: 166 KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 10/196 (5%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G+VY+ + + A+KK+ K E +P E+ L ++H NIV+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ + +L+F+++ L LL + L+ + +L + +G+AY H V +H
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV---LH 123
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGY-SLKITEK 943
RD+K N+L+ + E +ADFGLA+ F Y AP+ S K +
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYR--APDVLMGSKKYSTT 181
Query: 944 SDVYSYGVVLLEVLTG 959
D++S G + E++ G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 766 VGKGVSGIVYRVEI------PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G G G VY ++ PS +AVK L P E E D F E + H+NI
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNI 122
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII------LGVAHGLAY 873
VR +G R +L + ++ G L L E + S ++ +A G Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 874 LHHDCVPPIIHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L + IHRDI + N L+ GP A + DFG+A+ ++
Sbjct: 183 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 239
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
PE T K+D +S+GV+L E+ + G P S+
Sbjct: 240 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 276
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
+ +F E + L H NIVRL+G C + ++ + + G L + L +
Sbjct: 156 KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL 215
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+++ A G+ YL C IHRD+ + N LV + ++DFG+++
Sbjct: 216 LQMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272
Query: 921 XXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT 958
+ APE + + +SDV+S+G++L E +
Sbjct: 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 72
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L++ + G L + E K L+W
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 125
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 226
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 73
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L++ + G L + E K L+W
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 126
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 227
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 71
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L++ + G L + E K L+W
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 124
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 125 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 225
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 70
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L++ + G L + E K L+W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 224
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 10/196 (5%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G+VY+ + + A+KK+ K E +P E+ L ++H NIV+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ + +L+F+++ L LL + L+ + +L + +G+AY H V +H
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV---LH 123
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGY-SLKITEK 943
RD+K N+L+ + E +ADFGLA+ F Y AP+ S K +
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYR--APDVLMGSKKYSTT 181
Query: 944 SDVYSYGVVLLEVLTG 959
D++S G + E++ G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Query: 783 QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC--NNGRTRLLLFDYIS 840
+ +AVK L P G E++ L ++ H+NIV+ G C + G L+ +++
Sbjct: 39 EQVAVKSLKPESGGN--HIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 96
Query: 841 NGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA 900
+GSL L + K ++ + K + + G+ YL +HRD+ + N+LV + +
Sbjct: 97 SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQV 153
Query: 901 FLADFGLAKLFXXXXXXXXXXXXXXX-YGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT 958
+ DFGL K + APE K SDV+S+GV L E+LT
Sbjct: 154 KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 784 VIAVKKLWPVKNGELPERD--QFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYIS 840
+AVK L + E+D +E++ + I +HKNI+ LLG C ++ +Y S
Sbjct: 115 TVAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 170
Query: 841 NGSLAGLLH------------------EKKVFLDWDSRYKIILGVAHGLAYL-HHDCVPP 881
G+L L E+ F D S +A G+ YL C
Sbjct: 171 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS---CTYQLARGMEYLASQKC--- 224
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
IHRD+ + N+LV +ADFGLA+ ++APE + T
Sbjct: 225 -IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 283
Query: 942 EKSDVYSYGVVLLEVLT 958
+SDV+S+GV++ E+ T
Sbjct: 284 HQSDVWSFGVLMWEIFT 300
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain
Of Csf-1r
Length = 324
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 119/287 (41%), Gaps = 57/287 (19%)
Query: 785 IAVKKLWPVKNGELPERDQFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISNGS 843
+AVK L + + E++ +E++ + + +H+NIV LLG C +G L++ +Y G
Sbjct: 64 VAVKMLKSTAHAD--EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 121
Query: 844 LAGLLHEKKVF--------------LDWDSRYKIIL--------GVAHGLAYL-HHDCVP 880
L L K LD + + L VA G+A+L +C
Sbjct: 122 LLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC-- 179
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IHRD+ + N+L+ A + DFGLA+ ++APE +
Sbjct: 180 --IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 237
Query: 941 TEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMR 999
T +SDV+SYG++L E+ + G P + VN + + L++
Sbjct: 238 TVQSDVWSYGILLWEIFSLGLNPYPGIL---------VNSKFYK-------------LVK 275
Query: 1000 SGTQIQEML----QVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
G Q+ + + + C P RPT + + + L+E E+
Sbjct: 276 DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 322
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 82/192 (42%), Gaps = 25/192 (13%)
Query: 785 IAVKKLWPVKNGELPERD--QFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISN 841
+AVK L + E+D +E++ + I +HKNI+ LLG C ++ +Y S
Sbjct: 104 VAVKML----KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 159
Query: 842 GSLAGLL---------------HEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRD 886
G+L L H + L VA G+ YL IHRD
Sbjct: 160 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRD 216
Query: 887 IKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDV 946
+ + N+LV +ADFGLA+ ++APE + T +SDV
Sbjct: 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 276
Query: 947 YSYGVVLLEVLT 958
+S+GV+L E+ T
Sbjct: 277 WSFGVLLWEIFT 288
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 20/172 (11%)
Query: 800 ERDQFSAEVQTLGSIRHKNIVRLL----GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFL 855
ER +F E + L ++H NIVR + +L+ + ++G+L L KV
Sbjct: 68 ERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKV-- 125
Query: 856 DWDSRYKIILG----VAHGLAYLHHDCVPPIIHRDIKSNNILV-GPQFEAFLADFGLAKL 910
+ K++ + GL +LH PPIIHRD+K +NI + GP + D GLA L
Sbjct: 126 ---XKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181
Query: 911 FXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+ APE Y K E DVY++G LE T + P
Sbjct: 182 KRASFAKAVIGTPE----FXAPEX-YEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 766 VGKGVSGIVYRVE--IPSRQVI--AVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVR 821
+G G G+V R E PS + + AVK L P + D F EV + S+ H+N++R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 822 LLGCCNNGRTRLLLFDYISNGSLAGLL--HEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
L G +++ + GSL L H+ L SRY + VA G+ YL
Sbjct: 76 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 130
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
IHRD+ + N+L+ + + DFGL + L + + APE +
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 939 KITEKSDVYSYGVVLLEVLT-GKEP 962
+ SD + +GV L E+ T G+EP
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 11/209 (5%)
Query: 754 DDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGS 813
DD R+S+ +G G G+V +V+ +I +KL ++ + R+Q E+Q L
Sbjct: 15 DDDFERISE---LGAGNGGVVTKVQHRPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHE 70
Query: 814 IRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAY 873
IV G + + +++ GSL +L E K + + K+ + V GLAY
Sbjct: 71 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE-EILGKVSIAVLRGLAY 129
Query: 874 LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE 933
L I+HRD+K +NILV + E L DFG++ Y+APE
Sbjct: 130 LREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR----SYMAPE 183
Query: 934 YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+ +SD++S G+ L+E+ G+ P
Sbjct: 184 RLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 766 VGKGVSGIVYRVE--IPSRQVI--AVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVR 821
+G G G+V R E PS + + AVK L P + D F EV + S+ H+N++R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 822 LLGCCNNGRTRLLLFDYISNGSLAGLL--HEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
L G +++ + GSL L H+ L SRY + VA G+ YL
Sbjct: 80 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 134
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
IHRD+ + N+L+ + + DFGL + L + + APE +
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 939 KITEKSDVYSYGVVLLEVLT-GKEP 962
+ SD + +GV L E+ T G+EP
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 766 VGKGVSGIVYRVE--IPSRQVI--AVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVR 821
+G G G+V R E PS + + AVK L P + D F EV + S+ H+N++R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 822 LLGCCNNGRTRLLLFDYISNGSLAGLL--HEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
L G +++ + GSL L H+ L SRY + VA G+ YL
Sbjct: 76 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 130
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
IHRD+ + N+L+ + + DFGL + L + + APE +
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 939 KITEKSDVYSYGVVLLEVLT-GKEP 962
+ SD + +GV L E+ T G+EP
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With Flavonoid
Glycoside Quercitrin
Length = 305
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 33/255 (12%)
Query: 765 IVGKGVSGIVYRVEIPS----RQVIAVKKLWPVKNGELPERDQFSAEVQ--TLGSIRHKN 818
++G+G G V+ V+ S RQ+ A+K L K L RD+ +++ L + H
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVL---KKATLKVRDRVRTKMERDILVEVNHPF 88
Query: 819 IVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDC 878
IV+L L+ D++ G L L ++ +F + D ++ + +A L +LH
Sbjct: 89 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDHLHS-- 145
Query: 879 VPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
II+RD+K NIL+ + L DFGL+K Y+APE
Sbjct: 146 -LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRR 202
Query: 939 KITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLM 998
T+ +D +S+GV++ E+LTG P ++RK T IL +L M
Sbjct: 203 GHTQSADWWSFGVLMFEMLTGTLPFQG----------------KDRKETMTMILKAKLGM 246
Query: 999 RS--GTQIQEMLQVL 1011
+ Q +L++L
Sbjct: 247 PQFLSPEAQSLLRML 261
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 33/255 (12%)
Query: 765 IVGKGVSGIVYRVEIPS----RQVIAVKKLWPVKNGELPERDQFSAEVQ--TLGSIRHKN 818
++G+G G V+ V+ S RQ+ A+K L K L RD+ +++ L + H
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVL---KKATLKVRDRVRTKMERDILVEVNHPF 87
Query: 819 IVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDC 878
IV+L L+ D++ G L L ++ +F + D ++ + +A L +LH
Sbjct: 88 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDHLHS-- 144
Query: 879 VPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
II+RD+K NIL+ + L DFGL+K Y+APE
Sbjct: 145 -LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 939 KITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLM 998
T+ +D +S+GV++ E+LTG P ++RK T IL +L M
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQG----------------KDRKETMTMILKAKLGM 245
Query: 999 RS--GTQIQEMLQVL 1011
+ Q +L++L
Sbjct: 246 PQFLSPEAQSLLRML 260
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 33/255 (12%)
Query: 765 IVGKGVSGIVYRVEIPS----RQVIAVKKLWPVKNGELPERDQFSAEVQ--TLGSIRHKN 818
++G+G G V+ V+ S RQ+ A+K L K L RD+ +++ L + H
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVL---KKATLKVRDRVRTKMERDILVEVNHPF 87
Query: 819 IVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDC 878
IV+L L+ D++ G L L ++ +F + D ++ + +A L +LH
Sbjct: 88 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDHLHS-- 144
Query: 879 VPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
II+RD+K NIL+ + L DFGL+K Y+APE
Sbjct: 145 -LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 939 KITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLM 998
T+ +D +S+GV++ E+LTG P ++RK T IL +L M
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQG----------------KDRKETMTMILKAKLGM 245
Query: 999 RS--GTQIQEMLQVL 1011
+ Q +L++L
Sbjct: 246 PQFLSPEAQSLLRML 260
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 766 VGKGVSGIVYRVE--IPSRQVI--AVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVR 821
+G G G+V R E PS + + AVK L P + D F EV + S+ H+N++R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 822 LLGCCNNGRTRLLLFDYISNGSLAGLL--HEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
L G +++ + GSL L H+ L SRY + VA G+ YL
Sbjct: 76 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 130
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
IHRD+ + N+L+ + + DFGL + L + + APE +
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 939 KITEKSDVYSYGVVLLEVLT-GKEP 962
+ SD + +GV L E+ T G+EP
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 31/216 (14%)
Query: 764 NIVGKGVSGIVYRVEIPS---RQVIAVKKLWPVKNGELPERDQFSAEVQTLGSI-RHKNI 819
+++G+G G V + I R A+K++ + + RD F+ E++ L + H NI
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD-DHRD-FAGELEVLCKLGHHPNI 85
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII--------------- 864
+ LLG C + L +Y +G+L L + +V L+ D + I
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV-LETDPAFAIANSTASTLSSQQLLHF 144
Query: 865 -LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
VA G+ YL IHR++ + NILVG + A +ADFGL++
Sbjct: 145 AADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMG 198
Query: 924 XXXYGYIAPE-YGYSLKITEKSDVYSYGVVLLEVLT 958
++A E YS+ T SDV+SYGV+L E+++
Sbjct: 199 RLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVS 233
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 67
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 68 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 120
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 121 VQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 178 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 221
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 13/219 (5%)
Query: 748 KLNFSVDDVVTRLSDTNIVGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSA 806
K F++DD +GKG G VY E ++ ++A+K L+ + + Q
Sbjct: 8 KRKFTIDD----FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
E++ +RH NI+R+ ++ + L+ ++ G L L + F D +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEE 122
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+A L Y H +IHRDIK N+L+G + E +ADFG +
Sbjct: 123 LADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGT 175
Query: 927 YGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
Y+ PE EK D++ GV+ E L G P DS
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 758 TRLSDTNIVGKGVSGIVYR---------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEV 808
T L ++G G G VY+ V+IP + + P N E+ + E
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILD------EA 70
Query: 809 QTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVA 868
+ + + RLLG C +L+ + G L + E + L + +A
Sbjct: 71 YVMAGVGSPYVSRLLGICLTSTVQLVT-QLMPYGCLLDHVRENRGRLGSQDLLNWCMQIA 129
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
G++YL ++HRD+ + N+LV + DFGLA+L
Sbjct: 130 KGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIK 186
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDS----RIPD 969
++A E + T +SDV+SYGV + E++T G +P D IPD
Sbjct: 187 WMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPD 232
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 70
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW------C 123
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 224
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 96/209 (45%), Gaps = 26/209 (12%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQF-SAEVQTLGSIRHKNIVRLLG 824
+GKG G V+R + +V AVK ER F AE+ +RH+NI+ +
Sbjct: 50 IGKGRFGEVWRGKWRGEEV-AVKIF-----SSREERSWFREAEIYQTVMLRHENILGFIA 103
Query: 825 CCN--NGR-TRLLLF-DYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV- 879
N NG T+L L DY +GSL L+ V ++ K+ L A GLA+LH + V
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTASGLAHLHMEIVG 161
Query: 880 ----PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXX--XXXXXYGYIAPE 933
P I HRD+KS NILV +AD GLA Y+APE
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 934 Y---GYSLKITE---KSDVYSYGVVLLEV 956
++K E ++D+Y+ G+V E+
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 95
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 96 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 148
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 149 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 205
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 206 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 249
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 76
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 77 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 129
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 130 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 186
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 187 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 230
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 80
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 81 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 133
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 134 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 191 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 234
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 73
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 126
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 227
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 77
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 130
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 231
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 70
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 64
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 65 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 117
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 118 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 218
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 70
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 73
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 126
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 227
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 73
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 126
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 227
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 28/221 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 72
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 125
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFG AKL
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTD 964
++A E T +SDV+SYGV + E++T G +P D
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 28/221 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++ G G VY+ + IP + + + PV EL E A E
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 77
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 130
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTD 964
++A E T +SDV+SYGV + E++T G +P D
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 13/219 (5%)
Query: 748 KLNFSVDDVVTRLSDTNIVGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSA 806
K F++DD +GKG G VY E ++ ++A+K L+ + + Q
Sbjct: 9 KRKFTIDD----FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 64
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
E++ +RH NI+R+ ++ + L+ ++ G L L + F D +
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEE 123
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+A L Y H +IHRDIK N+L+G + E +ADFG +
Sbjct: 124 LADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGT 176
Query: 927 YGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
Y+ PE EK D++ GV+ E L G P DS
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY V+ +A+K + + + ER +F E + ++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLH------EKKVFLDWDSRYKIIL---GVAHG 870
VRLLG + G+ L++ + ++ G L L E L S K+I +A G
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ + +HRD+ + N +V F + DFG+ + ++
Sbjct: 145 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 201
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
+PE T SDV+S+GVVL E+ T E
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIATLAE 232
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 13/219 (5%)
Query: 748 KLNFSVDDVVTRLSDTNIVGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSA 806
K F++DD +GKG G VY E ++ ++A+K L+ + + Q
Sbjct: 8 KRKFTIDD----FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
E++ +RH NI+R+ ++ + L+ ++ G L L + F D +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEE 122
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+A L Y H +IHRDIK N+L+G + E +ADFG +
Sbjct: 123 LADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGT 175
Query: 927 YGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
Y+ PE EK D++ GV+ E L G P DS
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 77/302 (25%), Positives = 124/302 (41%), Gaps = 39/302 (12%)
Query: 759 RLSDTNIVGKGVSGIVYRVE------IPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTL 811
RL+ +G+G G V + + + +AVK L K G E +E++ L
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML---KEGATHSEHRALMSELKIL 84
Query: 812 GSI-RHKNIVRLLGCCNN-GRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVA 868
I H N+V LLG C G +++ ++ G+L+ L K+ F+ + YK L +
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 869 HGLAY-------LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXX 921
H + Y + IHRD+ + NIL+ + + DFGLA+
Sbjct: 145 HLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 204
Query: 922 XXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGE 980
++APE + T +SDV+S+GV+L E+ + G P D G
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 264
Query: 981 LRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEIRH 1040
R R ++TT EM Q + L C + P +RPT ++ L +
Sbjct: 265 -RMRAPDYTT--------------PEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQ 306
Query: 1041 EN 1042
N
Sbjct: 307 AN 308
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 77/303 (25%), Positives = 126/303 (41%), Gaps = 41/303 (13%)
Query: 759 RLSDTNIVGKGVSGIVYRVE------IPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTL 811
RL+ +G+G G V + + + +AVK L K G E +E++ L
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML---KEGATHSEHRALMSELKIL 84
Query: 812 GSI-RHKNIVRLLGCCNN-GRTRLLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVA 868
I H N+V LLG C G +++ ++ G+L+ L K+ F+ + YK L +
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 869 HGLAY-------LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXX 921
H + Y + IHRD+ + NIL+ + + DFGLA+
Sbjct: 145 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKG 204
Query: 922 XXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGE 980
++APE + T +SDV+S+GV+L E+ + G P ++ E
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG---------VKIDEE 255
Query: 981 LRERKREFTTILDRQLLMRS-GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEIR 1039
R +E T MR+ EM Q + L C + P +RPT ++ L +
Sbjct: 256 FXRRLKEGTR-------MRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 305
Query: 1040 HEN 1042
N
Sbjct: 306 QAN 308
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY V+ +A+K + + + ER +F E + ++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHV 75
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLH------EKKVFLDWDSRYKIIL---GVAHG 870
VRLLG + G+ L++ + ++ G L L E L S K+I +A G
Sbjct: 76 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ + +HRD+ + N +V F + DFG+ + ++
Sbjct: 136 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 192
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
+PE T SDV+S+GVVL E+ T E
Sbjct: 193 SPESLKDGVFTTYSDVWSFGVVLWEIATLAE 223
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY V+ +A+K + + + ER +F E + ++
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHV 112
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLH------EKKVFLDWDSRYKIIL---GVAHG 870
VRLLG + G+ L++ + ++ G L L E L S K+I +A G
Sbjct: 113 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ + +HRD+ + N +V F + DFG+ + ++
Sbjct: 173 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 229
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
+PE T SDV+S+GVVL E+ T E
Sbjct: 230 SPESLKDGVFTTYSDVWSFGVVLWEIATLAE 260
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY V+ +A+K + + + ER +F E + ++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHV 81
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLH------EKKVFLDWDSRYKIIL---GVAHG 870
VRLLG + G+ L++ + ++ G L L E L S K+I +A G
Sbjct: 82 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ + +HRD+ + N +V F + DFG+ + ++
Sbjct: 142 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
+PE T SDV+S+GVVL E+ T E
Sbjct: 199 SPESLKDGVFTTYSDVWSFGVVLWEIATLAE 229
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY V+ +A+K + + + ER +F E + ++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLH------EKKVFLDWDSRYKIIL---GVAHG 870
VRLLG + G+ L++ + ++ G L L E L S K+I +A G
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ + +HRD+ + N +V F + DFG+ + ++
Sbjct: 138 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
+PE T SDV+S+GVVL E+ T E
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAE 225
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY V+ +A+K + + + ER +F E + ++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLH------EKKVFLDWDSRYKIIL---GVAHG 870
VRLLG + G+ L++ + ++ G L L E L S K+I +A G
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ + +HRD+ + N +V F + DFG+ + ++
Sbjct: 144 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
+PE T SDV+S+GVVL E+ T E
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIATLAE 231
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 79/293 (26%), Positives = 118/293 (40%), Gaps = 60/293 (20%)
Query: 785 IAVKKLWPVKNGELPERD--QFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISN 841
+AVK L + E+D +E++ + I +HKNI+ LLG C ++ +Y S
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 842 GSLAGLL------------------HEKKVFLDWDS-RYKIILGVAHGLAYL-HHDCVPP 881
G+L L E+ F D S Y++ A G+ YL C
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL----ARGMEYLASQKC--- 178
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
IHRD+ + N+LV +ADFGLA+ ++APE + T
Sbjct: 179 -IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 942 EKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRS 1000
+SDV+S+GV++ E+ T G P IP G ++ T L ++MR
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNEL--YMMMRD 294
Query: 1001 GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI-----RHENDDLEKP 1048
C + P +RPT K + L I E DL +P
Sbjct: 295 ----------------CWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQP 331
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 79/293 (26%), Positives = 118/293 (40%), Gaps = 60/293 (20%)
Query: 785 IAVKKLWPVKNGELPERD--QFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISN 841
+AVK L + E+D +E++ + I +HKNI+ LLG C ++ +Y S
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 842 GSLAGLL------------------HEKKVFLDWDS-RYKIILGVAHGLAYL-HHDCVPP 881
G+L L E+ F D S Y++ A G+ YL C
Sbjct: 126 GNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQL----ARGMEYLASQKC--- 178
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
IHRD+ + N+LV +ADFGLA+ ++APE + T
Sbjct: 179 -IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 942 EKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRS 1000
+SDV+S+GV++ E+ T G P IP G ++ T L ++MR
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNEL--YMMMRD 294
Query: 1001 GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI-----RHENDDLEKP 1048
C + P +RPT K + L I E DL +P
Sbjct: 295 ----------------CWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQP 331
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY V+ +A+K + + + ER +F E + ++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLH------EKKVFLDWDSRYKIIL---GVAHG 870
VRLLG + G+ L++ + ++ G L L E L S K+I +A G
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ + +HRD+ + N +V F + DFG+ + ++
Sbjct: 144 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
+PE T SDV+S+GVVL E+ T E
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIATLAE 231
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY V+ +A+K + + + ER +F E + ++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLH------EKKVFLDWDSRYKIIL---GVAHG 870
VRLLG + G+ L++ + ++ G L L E L S K+I +A G
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ + +HRD+ + N +V F + DFG+ + ++
Sbjct: 145 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 201
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
+PE T SDV+S+GVVL E+ T E
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIATLAE 232
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 124/327 (37%), Gaps = 49/327 (14%)
Query: 741 WDFTPFQKLNFSVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPE 800
WD PF++L ++GKG G VY I +L ++ +
Sbjct: 28 WDI-PFEQLEIG-----------ELIGKGRFGQVYHGRWHGEVAI---RLIDIERDNEDQ 72
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
F EV RH+N+V +G C + ++ +L ++ + K+ LD +
Sbjct: 73 LKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKT 132
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + G+ YLH I+H+D+KS N+ + + DFGL +
Sbjct: 133 RQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRE 188
Query: 921 XXXXXXYGY---IAPEYGYSLK---------ITEKSDVYSYGVVLLEVLTGKEPTDSRIP 968
G+ +APE L ++ SDV++ G + E+ + P ++
Sbjct: 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ-- 246
Query: 969 DGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTM 1028
A I W G T + L +QI ++ + L C EERPT
Sbjct: 247 -PAEAIIWQMG----------TGMKPNL-----SQIGMGKEISDILLFCWAFEQEERPTF 290
Query: 1029 KDVTAMLKEIRHENDDLEKPNSLSRAV 1055
+ ML+++ N L P ++
Sbjct: 291 TKLMDMLEKLPKRNRRLSHPGHFWKSA 317
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY V+ +A+K + + + ER +F E + ++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLH------EKKVFLDWDSRYKIIL---GVAHG 870
VRLLG + G+ L++ + ++ G L L E L S K+I +A G
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ + +HRD+ + N +V F + DFG+ + ++
Sbjct: 151 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
+PE T SDV+S+GVVL E+ T E
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATLAE 238
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ YL
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 169
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 120/297 (40%), Gaps = 40/297 (13%)
Query: 749 LNFSVDDVVTRLSDTNIVGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSA- 806
+ V R + +G+G VY+ + + Q++A+KK+ E + +A
Sbjct: 1 MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL 60
Query: 807 -EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIIL 865
E++ L + H NI+ LL + L+FD++ L ++ + + L +L
Sbjct: 61 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYML 119
Query: 866 GVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXX 925
GL YLH I+HRD+K NN+L+ LADFGLAK F
Sbjct: 120 MTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTR 176
Query: 926 XYGYIAPEYGYSLKITEKS-DVYSYGVVLLEVL--------------------TGKEPTD 964
Y APE + ++ D+++ G +L E+L T PT+
Sbjct: 177 WYR--APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE 234
Query: 965 SRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPC 1021
+ PD + +V + F I + +G + +++Q L NPC
Sbjct: 235 EQWPDMCSLPDYVTF------KSFPGIPLHHIFSAAGDDLLDLIQ----GLFLFNPC 281
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 31/278 (11%)
Query: 783 QVIAVKKLWPVKNGELPE-RDQFSAEVQTLGSIRHKNIVRLLGCCNN-GRTRL-LLFDYI 839
+++AVK L K P+ R + E+ L ++ H++I++ GCC + G L L+ +Y+
Sbjct: 61 EMVAVKAL---KADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 840 SNGSLAGLLHEKKVFLDWDSRYKIIL---GVAHGLAYLHHDCVPPIIHRDIKSNNILVGP 896
GSL L + L +++L + G+AYLH IHRD+ + N+L+
Sbjct: 118 PLGSLRDYLPRHSIGLA-----QLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDN 169
Query: 897 QFEAFLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLE 955
+ DFGLAK + APE K SDV+S+GV L E
Sbjct: 170 DRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 229
Query: 956 VLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVAL 1015
+LT + + S +I G++ T+L L+ G ++ +
Sbjct: 230 LLTHCDSSQSPPTKFLELIGIAQGQM--------TVLRLTELLERGERLPRPDKCPAEVY 281
Query: 1016 LCVNPCPEE----RPTMKDVTAMLKEIRHENDDLEKPN 1049
+ C E RPT +++ +LK + HE + P+
Sbjct: 282 HLMKNCWETEASFRPTFENLIPILKTV-HEKYQGQAPS 318
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ YL
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 170
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++ G G VY+ + IP + + + PV EL E A E
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 77
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L++ + G L + E K L+W
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 130
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 231
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ + +AVK L P G + + F E + +++H +VRL
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKP---GTMSVQ-AFLEEANLMKTLQHDKLVRLYAV 76
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIIL--------GVAHGLAYLHHD 877
++ +Y++ GSL FL D K++L +A G+AY+
Sbjct: 77 VTREEPIYIITEYMAKGSLLD-------FLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 878 CVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYS 937
IHRD+++ N+LV +ADFGLA++ + APE
Sbjct: 130 ---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINF 185
Query: 938 LKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
T KSDV+S+G++L E++T GK P R
Sbjct: 186 GCFTIKSDVWSFGILLYEIVTYGKIPYPGR 215
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 800 ERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDS 859
+R++ S E+ S+ H+++V G + ++ + SL L +K + ++
Sbjct: 64 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 123
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
RY + + G YLH + V IHRD+K N+ + E + DFGLA
Sbjct: 124 RY-YLRQIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGER 177
Query: 920 XXXXXXXYGYIAPEY----GYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIIT 975
YIAPE G+S ++ DV+S G ++ +L GK P ++ +
Sbjct: 178 KKTLCGTPNYIAPEVLSKKGHSFEV----DVWSIGCIMYTLLVGKPPFETSCLKETY--- 230
Query: 976 WVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVN 1019
LR +K E++ + + + + + IQ+MLQ A +N
Sbjct: 231 -----LRIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTIN 267
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 72
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L++ + G L + E K L+W
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 125
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFG AKL
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 226
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 72
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L++ + G L + E K L+W
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 125
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFG AKL
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 226
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 74
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L++ + G L + E K L+W
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 127
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFG AKL
Sbjct: 128 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 184
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 228
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
Length = 317
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 77/300 (25%), Positives = 116/300 (38%), Gaps = 53/300 (17%)
Query: 766 VGKGVSGIVYRVEI-------PSRQV-IAVKKLWPVKNGELPERD--QFSAEVQTLGSI- 814
+G+G G V E P+R +AVK L + E+D +E++ + I
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLSDLISEMEMMKMIG 91
Query: 815 RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLL---------------HEKKVFLDWDS 859
+HKNI+ LLG C ++ +Y S G+L L H + L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
VA G+ YL IHRD+ + N+LV +ADFGLA+
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVN 978
++APE + T +SDV+S+GV+L E+ T G P +P
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLKE 267
Query: 979 GELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
G ++ T L ++MR C + P +RPT K + L I
Sbjct: 268 GHRMDKPSNCTNEL--YMMMRD----------------CWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 81/315 (25%), Positives = 120/315 (38%), Gaps = 58/315 (18%)
Query: 766 VGKGVSGIVYRVEI-------PSRQV-IAVKKLWPVKNGELPERD--QFSAEVQTLGSI- 814
+G+G G V E P+R +AVK L + E+D +E++ + I
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLSDLISEMEMMKMIG 91
Query: 815 RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLL---------------HEKKVFLDWDS 859
+HKNI+ LLG C ++ +Y S G+L L H + L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
VA G+ YL IHRD+ + N+LV +ADFGLA+
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVN 978
++APE + T +SDV+S+GV+L E+ T G P +P
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLKE 267
Query: 979 GELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
G ++ T L ++MR C + P +RPT K + L I
Sbjct: 268 GHRMDKPSNCTNEL--YMMMRD----------------CWHAVPSQRPTFKQLVEDLDRI 309
Query: 1039 -----RHENDDLEKP 1048
E DL P
Sbjct: 310 VALTSNQEYLDLSMP 324
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 77/300 (25%), Positives = 116/300 (38%), Gaps = 53/300 (17%)
Query: 766 VGKGVSGIVYRVEI-------PSRQV-IAVKKLWPVKNGELPERD--QFSAEVQTLGSI- 814
+G+G G V E P+R +AVK L + E+D +E++ + I
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLSDLISEMEMMKMIG 91
Query: 815 RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLL---------------HEKKVFLDWDS 859
+HKNI+ LLG C ++ +Y S G+L L H + L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
VA G+ YL IHRD+ + N+LV +ADFGLA+
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVN 978
++APE + T +SDV+S+GV+L E+ T G P +P
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLKE 267
Query: 979 GELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
G ++ T L ++MR C + P +RPT K + L I
Sbjct: 268 GHRMDKPSNCTNEL--YMMMRD----------------CWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 83/315 (26%), Positives = 122/315 (38%), Gaps = 58/315 (18%)
Query: 766 VGKGVSGIVYRVEI-------PSRQV-IAVKKLWPVKNGELPERD--QFSAEVQTLGSI- 814
+G+G G V E P+R +AVK L + E+D +E++ + I
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLSDLISEMEMMKMIG 91
Query: 815 RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLL---------------HEKKVFLDWDS 859
+HKNI+ LLG C ++ +Y S G+L L H + L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
VA G+ YL IHRD+ + N+LV +ADFGLA+
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVN 978
++APE + T +SDV+S+GV+L E+ T G P +P
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLKE 267
Query: 979 GELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
G ++ T L ++MR C + P +RPT K + L I
Sbjct: 268 GHRMDKPSNCTNEL--YMMMRD----------------CWHAVPSQRPTFKQLVEDLDRI 309
Query: 1039 -----RHENDDLEKP 1048
E DL P
Sbjct: 310 VALTSNQEXLDLSMP 324
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 77/300 (25%), Positives = 116/300 (38%), Gaps = 53/300 (17%)
Query: 766 VGKGVSGIVYRVEI-------PSRQV-IAVKKLWPVKNGELPERD--QFSAEVQTLGSI- 814
+G+G G V E P+R +AVK L + E+D +E++ + I
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLSDLISEMEMMKMIG 76
Query: 815 RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLL---------------HEKKVFLDWDS 859
+HKNI+ LLG C ++ +Y S G+L L H + L
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
VA G+ YL IHRD+ + N+LV +ADFGLA+
Sbjct: 137 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVN 978
++APE + T +SDV+S+GV+L E+ T G P +P
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLKE 252
Query: 979 GELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
G ++ T L ++MR C + P +RPT K + L I
Sbjct: 253 GHRMDKPSNCTNEL--YMMMRD----------------CWHAVPSQRPTFKQLVEDLDRI 294
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 77/300 (25%), Positives = 116/300 (38%), Gaps = 53/300 (17%)
Query: 766 VGKGVSGIVYRVEI-------PSRQV-IAVKKLWPVKNGELPERD--QFSAEVQTLGSI- 814
+G+G G V E P+R +AVK L + E+D +E++ + I
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLSDLISEMEMMKMIG 84
Query: 815 RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLL---------------HEKKVFLDWDS 859
+HKNI+ LLG C ++ +Y S G+L L H + L
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
VA G+ YL IHRD+ + N+LV +ADFGLA+
Sbjct: 145 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVN 978
++APE + T +SDV+S+GV+L E+ T G P +P
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLKE 260
Query: 979 GELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
G ++ T L ++MR C + P +RPT K + L I
Sbjct: 261 GHRMDKPSNCTNEL--YMMMRD----------------CWHAVPSQRPTFKQLVEDLDRI 302
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 77/300 (25%), Positives = 116/300 (38%), Gaps = 53/300 (17%)
Query: 766 VGKGVSGIVYRVEI-------PSRQV-IAVKKLWPVKNGELPERD--QFSAEVQTLGSI- 814
+G+G G V E P+R +AVK L + E+D +E++ + I
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLSDLISEMEMMKMIG 83
Query: 815 RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLL---------------HEKKVFLDWDS 859
+HKNI+ LLG C ++ +Y S G+L L H + L
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
VA G+ YL IHRD+ + N+LV +ADFGLA+
Sbjct: 144 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVN 978
++APE + T +SDV+S+GV+L E+ T G P +P
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLKE 259
Query: 979 GELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
G ++ T L ++MR C + P +RPT K + L I
Sbjct: 260 GHRMDKPSNCTNEL--YMMMRD----------------CWHAVPSQRPTFKQLVEDLDRI 301
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 18/173 (10%)
Query: 800 ERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSL-------AGLLHEKK 852
ER++ EV L +++H NIV+ + ++ DY G L G+L ++
Sbjct: 66 EREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQED 125
Query: 853 VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFX 912
LDW + + L ++H I+HRDIKS NI + L DFG+A++
Sbjct: 126 QILDW------FVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176
Query: 913 XXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
Y++PE + KSD+++ G VL E+ T K ++
Sbjct: 177 STVELARACIGTPY--YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + + + E QF E + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD--IGEVSQFLTEGIIMKDFSHPNVL 92
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ YL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 149
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 800 ERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDS 859
+R++ S E+ S+ H+++V G + ++ + SL L +K + ++
Sbjct: 60 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 119
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
RY + + G YLH + V IHRD+K N+ + E + DFGLA
Sbjct: 120 RY-YLRQIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGER 173
Query: 920 XXXXXXXYGYIAPEY----GYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIIT 975
YIAPE G+S ++ DV+S G ++ +L GK P ++ +
Sbjct: 174 KKTLCGTPNYIAPEVLSKKGHSFEV----DVWSIGCIMYTLLVGKPPFETSCLKETY--- 226
Query: 976 WVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVN 1019
LR +K E++ + + + + + IQ+MLQ A +N
Sbjct: 227 -----LRIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTIN 263
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 800 ERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDS 859
+R++ S E+ S+ H+++V G + ++ + SL L +K + ++
Sbjct: 84 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 143
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
RY + + G YLH + V IHRD+K N+ + E + DFGLA
Sbjct: 144 RY-YLRQIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGER 197
Query: 920 XXXXXXXYGYIAPEY----GYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIIT 975
YIAPE G+S ++ DV+S G ++ +L GK P ++ +
Sbjct: 198 KKVLCGTPNYIAPEVLSKKGHSFEV----DVWSIGCIMYTLLVGKPPFETSCLKETY--- 250
Query: 976 WVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVN 1019
LR +K E++ + + + + + IQ+MLQ A +N
Sbjct: 251 -----LRIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTIN 287
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
Length = 306
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 77/300 (25%), Positives = 116/300 (38%), Gaps = 53/300 (17%)
Query: 766 VGKGVSGIVYRVEI-------PSRQV-IAVKKLWPVKNGELPERD--QFSAEVQTLGSI- 814
+G+G G V E P+R +AVK L + E+D +E++ + I
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLSDLISEMEMMKMIG 80
Query: 815 RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLL---------------HEKKVFLDWDS 859
+HKNI+ LLG C ++ +Y S G+L L H + L
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
VA G+ YL IHRD+ + N+LV +ADFGLA+
Sbjct: 141 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVN 978
++APE + T +SDV+S+GV+L E+ T G P +P
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLKE 256
Query: 979 GELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
G ++ T L ++MR C + P +RPT K + L I
Sbjct: 257 GHRMDKPSNCTNEL--YMMMRD----------------CWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAK--LFXXXXXXXXXXXXXXXYGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ L ++A E +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A 2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 800 ERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDS 859
+R++ S E+ S+ H+++V G + ++ + SL L +K + ++
Sbjct: 60 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 119
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
RY + + G YLH + V IHRD+K N+ + E + DFGLA
Sbjct: 120 RY-YLRQIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGER 173
Query: 920 XXXXXXXYGYIAPEY----GYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIIT 975
YIAPE G+S ++ DV+S G ++ +L GK P ++ +
Sbjct: 174 KKTLCGTPNYIAPEVLSKKGHSFEV----DVWSIGCIMYTLLVGKPPFETSCLKETY--- 226
Query: 976 WVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVN 1019
LR +K E++ + + + + + IQ+MLQ A +N
Sbjct: 227 -----LRIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTIN 263
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ YL
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 143
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 800 ERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDS 859
+R++ S E+ S+ H+++V G + ++ + SL L +K + ++
Sbjct: 82 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 141
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
RY + + G YLH + V IHRD+K N+ + E + DFGLA
Sbjct: 142 RY-YLRQIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGER 195
Query: 920 XXXXXXXYGYIAPEY----GYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIIT 975
YIAPE G+S ++ DV+S G ++ +L GK P ++ +
Sbjct: 196 KKVLCGTPNYIAPEVLSKKGHSFEV----DVWSIGCIMYTLLVGKPPFETSCLKETY--- 248
Query: 976 WVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVN 1019
LR +K E++ + + + + + IQ+MLQ A +N
Sbjct: 249 -----LRIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTIN 285
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 17/252 (6%)
Query: 766 VGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G VY+ + + Q++A+K++ PV++ + + E+ + ++V+ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQV-PVES----DLQEIIKEISIMQQCDSPHVVKYYG 91
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y GS++ ++ + L D I+ GL YLH IH
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIH 148
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK+ NIL+ + A LADFG+A ++APE + +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPF--WMAPEVIQEIGYNCVA 206
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKRE-----FTTILDRQLLMR 999
D++S G+ +E+ GK P P A + N RK E FT + +Q L++
Sbjct: 207 DIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFV-KQCLVK 265
Query: 1000 SGTQIQEMLQVL 1011
S Q Q+L
Sbjct: 266 SPEQRATATQLL 277
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ YL
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 146
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/204 (28%), Positives = 89/204 (43%), Gaps = 16/204 (7%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE--LP-ERDQFSAEVQTLGSIRHKNIVR 821
+G G G VY+ P S +A+K + V NGE LP + A ++ L + H N+VR
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 822 LLGCCNNGRTR-----LLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHH 876
L+ C RT L+F+++ L L ++ ++ GL +LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 877 DCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGY 936
+C I+HRD+K NILV LADFGLA+++ Y APE
Sbjct: 131 NC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLW---YRAPEVLL 184
Query: 937 SLKITEKSDVYSYGVVLLEVLTGK 960
D++S G + E+ K
Sbjct: 185 QSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 111/278 (39%), Gaps = 55/278 (19%)
Query: 785 IAVKKLWPVKNGELPERD--QFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISN 841
+AVK L + E+D +E++ + I +HKNI+ LLG C ++ +Y S
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 842 GSLAGLL------------------HEKKVFLDWDS-RYKIILGVAHGLAYL-HHDCVPP 881
G+L L E+ F D S Y++ A G+ YL C
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL----ARGMEYLASQKC--- 178
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
IHRD+ + N+LV +ADFGLA+ ++APE + T
Sbjct: 179 -IHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 942 EKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRS 1000
+SDV+S+GV++ E+ T G P IP G ++ T L ++MR
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNEL--YMMMRD 294
Query: 1001 GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
C + P +RPT K + L I
Sbjct: 295 ----------------CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ YL
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 148
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 111/278 (39%), Gaps = 55/278 (19%)
Query: 785 IAVKKLWPVKNGELPERD--QFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISN 841
+AVK L + E+D +E++ + I +HKNI+ LLG C ++ +Y S
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASK 125
Query: 842 GSLAGLL------------------HEKKVFLDWDS-RYKIILGVAHGLAYL-HHDCVPP 881
G+L L E+ F D S Y++ A G+ YL C
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL----ARGMEYLASQKC--- 178
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
IHRD+ + N+LV +ADFGLA+ ++APE + T
Sbjct: 179 -IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 942 EKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRS 1000
+SDV+S+GV++ E+ T G P IP G ++ T L ++MR
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNEL--YMMMRD 294
Query: 1001 GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
C + P +RPT K + L I
Sbjct: 295 ----------------CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 111/278 (39%), Gaps = 55/278 (19%)
Query: 785 IAVKKLWPVKNGELPERD--QFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISN 841
+AVK L + E+D +E++ + I +HKNI+ LLG C ++ +Y S
Sbjct: 57 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 112
Query: 842 GSLAGLL------------------HEKKVFLDWDS-RYKIILGVAHGLAYL-HHDCVPP 881
G+L L E+ F D S Y++ A G+ YL C
Sbjct: 113 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL----ARGMEYLASQKC--- 165
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
IHRD+ + N+LV +ADFGLA+ ++APE + T
Sbjct: 166 -IHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 224
Query: 942 EKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRS 1000
+SDV+S+GV++ E+ T G P IP G ++ T L ++MR
Sbjct: 225 HQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNEL--YMMMRD 281
Query: 1001 GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
C + P +RPT K + L I
Sbjct: 282 ----------------CWHAVPSQRPTFKQLVEDLDRI 303
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 111/278 (39%), Gaps = 55/278 (19%)
Query: 785 IAVKKLWPVKNGELPERD--QFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISN 841
+AVK L + E+D +E++ + I +HKNI+ LLG C ++ +Y S
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 842 GSLAGLL------------------HEKKVFLDWDS-RYKIILGVAHGLAYL-HHDCVPP 881
G+L L E+ F D S Y++ A G+ YL C
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL----ARGMEYLASQKC--- 178
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
IHRD+ + N+LV +ADFGLA+ ++APE + T
Sbjct: 179 -IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYT 237
Query: 942 EKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRS 1000
+SDV+S+GV++ E+ T G P IP G ++ T L ++MR
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNEL--YMMMRD 294
Query: 1001 GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
C + P +RPT K + L I
Sbjct: 295 ----------------CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 111/278 (39%), Gaps = 55/278 (19%)
Query: 785 IAVKKLWPVKNGELPERD--QFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISN 841
+AVK L + E+D +E++ + I +HKNI+ LLG C ++ +Y S
Sbjct: 62 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 117
Query: 842 GSLAGLL------------------HEKKVFLDWDS-RYKIILGVAHGLAYL-HHDCVPP 881
G+L L E+ F D S Y++ A G+ YL C
Sbjct: 118 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL----ARGMEYLASQKC--- 170
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
IHRD+ + N+LV +ADFGLA+ ++APE + T
Sbjct: 171 -IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 229
Query: 942 EKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRS 1000
+SDV+S+GV++ E+ T G P IP G ++ T L ++MR
Sbjct: 230 HQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNEL--YMMMRD 286
Query: 1001 GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
C + P +RPT K + L I
Sbjct: 287 ----------------CWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
Length = 313
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 111/278 (39%), Gaps = 55/278 (19%)
Query: 785 IAVKKLWPVKNGELPERD--QFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISN 841
+AVK L + E+D +E++ + I +HKNI+ LLG C ++ +Y S
Sbjct: 59 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 114
Query: 842 GSLAGLL------------------HEKKVFLDWDS-RYKIILGVAHGLAYL-HHDCVPP 881
G+L L E+ F D S Y++ A G+ YL C
Sbjct: 115 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL----ARGMEYLASQKC--- 167
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
IHRD+ + N+LV +ADFGLA+ ++APE + T
Sbjct: 168 -IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 226
Query: 942 EKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRS 1000
+SDV+S+GV++ E+ T G P IP G ++ T L ++MR
Sbjct: 227 HQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNEL--YMMMRD 283
Query: 1001 GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
C + P +RPT K + L I
Sbjct: 284 ----------------CWHAVPSQRPTFKQLVEDLDRI 305
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/179 (32%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 784 VIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYISN 841
++AVK+L +G +RD F E+Q L ++ IV+ G GR L L+ +Y+ +
Sbjct: 38 LVAVKQLQ--HSGPDQQRD-FQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPS 94
Query: 842 GSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYL-HHDCVPPIIHRDIKSNNILVGPQFEA 900
G L L + LD + G+ YL CV HRD+ + NILV +
Sbjct: 95 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCV----HRDLAARNILVESEAHV 150
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT 958
+ADFGLAKL + APE + +SDV+S+GVVL E+ T
Sbjct: 151 KIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/245 (26%), Positives = 96/245 (39%), Gaps = 48/245 (19%)
Query: 815 RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLL------------------HEKKVFLD 856
+HKNI+ LLG C ++ +Y S G+L L E+ F D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 857 WDS-RYKIILGVAHGLAYL-HHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX 914
S Y++ A G+ YL C IHRD+ + N+LV +ADFGLA+
Sbjct: 159 LVSCTYQL----ARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 915 XXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHI 973
++APE + T +SDV+S+GV++ E+ T G P IP
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELF 269
Query: 974 ITWVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTA 1033
G ++ T L ++MR C + P +RPT K +
Sbjct: 270 KLLKEGHRMDKPANCTNEL--YMMMRD----------------CWHAVPSQRPTFKQLVE 311
Query: 1034 MLKEI 1038
L I
Sbjct: 312 DLDRI 316
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 784 VIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYISN 841
++AVK+L +G +RD F E+Q L ++ IV+ G GR L L+ +Y+ +
Sbjct: 54 LVAVKQLQ--HSGPDQQRD-FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 110
Query: 842 GSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYL-HHDCVPPIIHRDIKSNNILVGPQFEA 900
G L L + LD + G+ YL CV HRD+ + NILV +
Sbjct: 111 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCV----HRDLAARNILVESEAHV 166
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT 958
+ADFGLAKL + APE + +SDV+S+GVVL E+ T
Sbjct: 167 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/204 (28%), Positives = 89/204 (43%), Gaps = 16/204 (7%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE--LP-ERDQFSAEVQTLGSIRHKNIVR 821
+G G G VY+ P S +A+K + V NGE LP + A ++ L + H N+VR
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 822 LLGCCNNGRTR-----LLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHH 876
L+ C RT L+F+++ L L ++ ++ GL +LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 877 DCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGY 936
+C I+HRD+K NILV LADFGLA+++ Y APE
Sbjct: 131 NC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLW---YRAPEVLL 184
Query: 937 SLKITEKSDVYSYGVVLLEVLTGK 960
D++S G + E+ K
Sbjct: 185 QSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY V+ +A+K + + + ER +F E + ++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLH------EKKVFLDWDSRYKIIL---GVAHG 870
VRLLG + G+ L++ + ++ G L L E L S K+I +A G
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ + +HRD+ + N V F + DFG+ + ++
Sbjct: 138 MAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
+PE T SDV+S+GVVL E+ T E
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAE 225
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEIXINKMLNHENVVKFYG 72
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 188
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 69
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE-KKVFLDWDSRYKIILGVAHGLAYLH 875
N+V+LLG C ++ ++++ G+L L E + ++ + ++ + YL
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
IHRD+ + N LVG +ADFGL++L + APE
Sbjct: 130 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESL 185
Query: 936 YSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K + KSDV+++GV+L E+ T G P
Sbjct: 186 AYNKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/204 (28%), Positives = 89/204 (43%), Gaps = 16/204 (7%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE--LP-ERDQFSAEVQTLGSIRHKNIVR 821
+G G G VY+ P S +A+K + V NGE LP + A ++ L + H N+VR
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 822 LLGCCNNGRTR-----LLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHH 876
L+ C RT L+F+++ L L ++ ++ GL +LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 877 DCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGY 936
+C I+HRD+K NILV LADFGLA+++ Y APE
Sbjct: 131 NC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLW---YRAPEVLL 184
Query: 937 SLKITEKSDVYSYGVVLLEVLTGK 960
D++S G + E+ K
Sbjct: 185 QSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 15/218 (6%)
Query: 755 DVVTR---LSDTNI---VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAE 807
D++TR + D I +GKG G VY E S ++A+K L+ + + Q E
Sbjct: 14 DILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRRE 73
Query: 808 VQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGV 867
++ + H NI+RL + R L+ +Y G L L +K D I+ +
Sbjct: 74 IEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL-QKSCTFDEQRTATIMEEL 132
Query: 868 AHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXY 927
A L Y H V IHRDIK N+L+G + E +ADFG +
Sbjct: 133 ADALMYCHGKKV---IHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMCGTL 185
Query: 928 GYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
Y+ PE EK D++ GV+ E+L G P +S
Sbjct: 186 DYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFES 223
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 111/278 (39%), Gaps = 55/278 (19%)
Query: 785 IAVKKLWPVKNGELPERD--QFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISN 841
+AVK L + E+D +E++ + I +HKNI+ LLG C ++ +Y S
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASK 125
Query: 842 GSLAGLL------------------HEKKVFLDWDS-RYKIILGVAHGLAYL-HHDCVPP 881
G+L L E+ F D S Y++ A G+ YL C
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL----ARGMEYLASQKC--- 178
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
IHRD+ + N+LV +ADFGLA+ ++APE + T
Sbjct: 179 -IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 942 EKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRS 1000
+SDV+S+GV++ E+ T G P IP G ++ T L ++MR
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNEL--YMMMRD 294
Query: 1001 GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
C + P +RPT K + L I
Sbjct: 295 ----------------CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEIXINKMLNHENVVKFYG 71
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 28/224 (12%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGE--LPERDQFSAEVQTLGSIRHKNIVRL 822
I +G G V++ ++ + +AVK ++P+++ + ER+ FS ++H+N+++
Sbjct: 22 IKARGRFGCVWKAQLMN-DFVAVK-IFPLQDKQSWQSEREIFSTP-----GMKHENLLQF 74
Query: 823 LGCCNNGRTR----LLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDC 878
+ G L+ + GSL L K + W+ + ++ GL+YLH D
Sbjct: 75 IAAEKRGSNLEVELWLITAFHDKGSLTDYL--KGNIITWNELCHVAETMSRGLSYLHEDV 132
Query: 879 --------VPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
P I HRD KS N+L+ A LADFGLA F Y+
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 931 APEY-----GYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPD 969
APE + + D+Y+ G+VL E+++ + D + +
Sbjct: 193 APEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDE 236
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G +G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 71
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 73
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE-KKVFLDWDSRYKIILGVAHGLAYLH 875
N+V+LLG C ++ ++++ G+L L E + ++ + ++ + YL
Sbjct: 74 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
IHRD+ + N LVG +ADFGL++L + APE
Sbjct: 134 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESL 189
Query: 936 YSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K + KSDV+++GV+L E+ T G P
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 784 VIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYISN 841
++AVK+L +G +RD F E+Q L ++ IV+ G GR L L+ +Y+ +
Sbjct: 42 LVAVKQLQ--HSGPDQQRD-FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 98
Query: 842 GSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYL-HHDCVPPIIHRDIKSNNILVGPQFEA 900
G L L + LD + G+ YL CV HRD+ + NILV +
Sbjct: 99 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCV----HRDLAARNILVESEAHV 154
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT 958
+ADFGLAKL + APE + +SDV+S+GVVL E+ T
Sbjct: 155 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 784 VIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYISN 841
++AVK+L +G +RD F E+Q L ++ IV+ G GR L L+ +Y+ +
Sbjct: 41 LVAVKQLQ--HSGPDQQRD-FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 97
Query: 842 GSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYL-HHDCVPPIIHRDIKSNNILVGPQFEA 900
G L L + LD + G+ YL CV HRD+ + NILV +
Sbjct: 98 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCV----HRDLAARNILVESEAHV 153
Query: 901 FLADFGLAKLF-XXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT 958
+ADFGLAKL + APE + +SDV+S+GVVL E+ T
Sbjct: 154 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEIXINKMLNHENVVKFYG 71
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++ G G VY+ + IP + + + PV EL E A E
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 70
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFGLAKL
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 224
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 38/243 (15%)
Query: 741 WDFTPFQKLNFSVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELP 799
W+F P + L F ++ + GK ++ Y + + +AVK L + +
Sbjct: 40 WEF-PRENLEFG------KVLGSGAFGKVMNATAYGISKTGVSIQVAVKML--KEKADSS 90
Query: 800 ERDQFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKV----- 853
ER+ +E++ + + H+NIV LLG C L+F+Y G L L K+
Sbjct: 91 EREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSED 150
Query: 854 -----------------FLDWDSRYKIILGVAHGLAYLH-HDCVPPIIHRDIKSNNILVG 895
L ++ VA G+ +L CV HRD+ + N+LV
Sbjct: 151 EIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCV----HRDLAARNVLVT 206
Query: 896 PQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLE 955
+ DFGLA+ ++APE + T KSDV+SYG++L E
Sbjct: 207 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWE 266
Query: 956 VLT 958
+ +
Sbjct: 267 IFS 269
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 77
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 130
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFG AKL
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 187
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 231
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 29/225 (12%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSA------EVQT 810
T ++G G G VY+ + IP + + + PV EL E A E
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI----PVAIKELREATSPKANKEILDEAYV 70
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKII 864
+ S+ + ++ RLLG C +L+ + G L + E K L+W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +A G+ YL ++HRD+ + N+LV + DFG AKL
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 180
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
++A E T +SDV+SYGV + E++T G +P D IP
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IP 224
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 66
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE------KKVFLDWDSRYKIILGVAHG 870
N+V+LLG C ++ ++++ G+L L E V L + + ++
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSA 121
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ YL IHRD+ + N LVG +ADFGL++L +
Sbjct: 122 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWT 177
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
APE K + KSDV+++GV+L E+ T G P
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 821 RLLGCC-NNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + + L++ Y+ +G L + + L VA G+ +L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 210
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 800 ERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDS 859
+R++ S E+ S+ H+++V G + ++ + SL L +K + ++
Sbjct: 58 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 117
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
RY + + G YLH + V IHRD+K N+ + E + DFGLA
Sbjct: 118 RY-YLRQIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGER 171
Query: 920 XXXXXXXYGYIAPEY----GYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIIT 975
YIAPE G+S ++ DV+S G ++ +L GK P ++ +
Sbjct: 172 KKVLCGTPNYIAPEVLSKKGHSFEV----DVWSIGCIMYTLLVGKPPFETSCLKETY--- 224
Query: 976 WVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVN 1019
LR +K E++ + + + + + IQ+MLQ A +N
Sbjct: 225 -----LRIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTIN 261
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 10/203 (4%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 217 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 272
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE-KKVFLDWDSRYKIILGVAHGLAYLH 875
N+V+LLG C ++ ++++ G+L L E + ++ + ++ + YL
Sbjct: 273 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 332
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
IHR++ + N LVG +ADFGL++L + APE
Sbjct: 333 KKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESL 388
Query: 936 YSLKITEKSDVYSYGVVLLEVLT 958
K + KSDV+++GV+L E+ T
Sbjct: 389 AYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINAMLNHENVVKFYG 72
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ +L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 149
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 68
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE------KKVFLDWDSRYKIILGVAHG 870
N+V+LLG C ++ ++++ G+L L E V L + + ++
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSA 123
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ YL IHRD+ + N LVG +ADFGL++L +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWT 179
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
APE K + KSDV+++GV+L E+ T G P
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 68
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE------KKVFLDWDSRYKIILGVAHG 870
N+V+LLG C ++ ++++ G+L L E V L + + ++
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSA 123
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ YL IHRD+ + N LVG +ADFGL++L +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWT 179
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
APE K + KSDV+++GV+L E+ T G P
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 275
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE------KKVFLDWDSRYKIILGVAHG 870
N+V+LLG C ++ ++++ G+L L E V L + + ++
Sbjct: 276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSA 330
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ YL IHR++ + N LVG +ADFGL++L +
Sbjct: 331 MEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWT 386
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT 958
APE K + KSDV+++GV+L E+ T
Sbjct: 387 APESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 125/301 (41%), Gaps = 42/301 (13%)
Query: 745 PFQKLNFSVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQF 804
P++K + + +L +G G G V+ +AVK + P G + + F
Sbjct: 177 PWEKDAWEIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKP---GSM-SVEAF 230
Query: 805 SAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK-------VFLDW 857
AE + +++H +V+L ++ ++++ GSL L + +D+
Sbjct: 231 LAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 289
Query: 858 DSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXX 917
++ +A G+A++ IHRD+++ NILV +ADFGLA++
Sbjct: 290 SAQ------IAEGMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340
Query: 918 XXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWV 977
+ APE T KSDV+S+G++L+E++T RIP
Sbjct: 341 AREGAKFPI-KWTAPEAINFGSFTIKSDVWSFGILLMEIVTY-----GRIPYPGM----- 389
Query: 978 NGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E L+R M E ++ + + C PEERPT + + ++L +
Sbjct: 390 ------SNPEVIRALERGYRMPRPENCPE--ELYNIMMRCWKNRPEERPTFEYIQSVLDD 441
Query: 1038 I 1038
Sbjct: 442 F 442
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ +L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 156
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 10/203 (4%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 259 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 314
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE-KKVFLDWDSRYKIILGVAHGLAYLH 875
N+V+LLG C ++ ++++ G+L L E + ++ + ++ + YL
Sbjct: 315 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 374
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
IHR++ + N LVG +ADFGL++L + APE
Sbjct: 375 KKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESL 430
Query: 936 YSLKITEKSDVYSYGVVLLEVLT 958
K + KSDV+++GV+L E+ T
Sbjct: 431 AYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 765 IVGKGVSGIVYR---VEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++G+G G VY ++ +++ AVK L + ++ E QF E + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 821 RLLGCCNNGR-TRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
LLG C + L++ Y+ +G L + + L VA G+ +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX--YGYIAPEYGYS 937
+HRD+ + N ++ +F +ADFGLA+ ++A E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEP 962
K T KSDV+S+GV+L E++T P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY V+ +A+K + + + ER +F E + ++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKIIL---GVAHG 870
VRLLG + G+ L++ + ++ G L L + L S K+I +A G
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ + +HRD+ + N +V F + DFG+ + ++
Sbjct: 151 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
+PE T SDV+S+GVVL E+ T E
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATLAE 238
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY V+ +A+K + + + ER +F E + ++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHV 80
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKK------VFLDWDSRYKIIL---GVAHG 870
VRLLG + G+ L++ + ++ G L L + L S K+I +A G
Sbjct: 81 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ + +HRD+ + N +V F + DFG+ + ++
Sbjct: 141 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 197
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
+PE T SDV+S+GVVL E+ T E
Sbjct: 198 SPESLKDGVFTTYSDVWSFGVVLWEIATLAE 228
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
+D+ AE + + + IVR++G C + +L+ + G L L + + D +
Sbjct: 414 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-KNI 471
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXXXX 919
+++ V+ G+ YL +HRD+ + N+L+ Q A ++DFGL+K L
Sbjct: 472 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE K + KSDV+S+GV++ E + G++P
Sbjct: 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 8/202 (3%)
Query: 766 VGKGVSGIVY-RVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 72
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITH 128
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 944 SDVYSYGVVLLEVLTGKEPTDS 965
DV+S G+VL +L G+ P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 40/279 (14%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ +AVK + P G + + F AE + +++H +V+L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKP---GSM-SVEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-------VFLDWDSRYKIILGVAHGLAYLHHDC 878
++ ++++ GSL L + +D+ ++ +A G+A++
Sbjct: 79 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQR- 130
Query: 879 VPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
IHRD+++ NILV +ADFGLA++ + APE
Sbjct: 131 --NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFG 187
Query: 939 KITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLM 998
T KSDV+S+G++L+E++T RIP E L+R M
Sbjct: 188 SFTIKSDVWSFGILLMEIVTY-----GRIPYPGM-----------SNPEVIRALERGYRM 231
Query: 999 RSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
E ++ + + C PEERPT + + ++L +
Sbjct: 232 PRPENCPE--ELYNIMMRCWKNRPEERPTFEYIQSVLDD 268
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 73
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE-KKVFLDWDSRYKIILGVAHGLAYLH 875
N+V+LLG C ++ ++++ G+L L E + ++ + ++ + YL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
IHRD+ + N LVG +ADFGL++L + APE
Sbjct: 134 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESL 189
Query: 936 YSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K + KSDV+++GV+L E+ T G P
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 71
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 73
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE-KKVFLDWDSRYKIILGVAHGLAYLH 875
N+V+LLG C ++ ++++ G+L L E + ++ + ++ + YL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
IHRD+ + N LVG +ADFGL++L + APE
Sbjct: 134 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESL 189
Query: 936 YSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K + KSDV+++GV+L E+ T G P
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 81
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE-KKVFLDWDSRYKIILGVAHGLAYLH 875
N+V+LLG C ++ ++++ G+L L E + ++ + ++ + YL
Sbjct: 82 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
IHRD+ + N LVG +ADFGL++L + APE
Sbjct: 142 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESL 197
Query: 936 YSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K + KSDV+++GV+L E+ T G P
Sbjct: 198 AYNKFSIKSDVWAFGVLLWEIATYGMSP 225
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 73
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE-KKVFLDWDSRYKIILGVAHGLAYLH 875
N+V+LLG C ++ ++++ G+L L E + ++ + ++ + YL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
IHRD+ + N LVG +ADFGL++L + APE
Sbjct: 134 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESL 189
Query: 936 YSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K + KSDV+++GV+L E+ T G P
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 68
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE-KKVFLDWDSRYKIILGVAHGLAYLH 875
N+V+LLG C ++ ++++ G+L L E + ++ + ++ + YL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
IHRD+ + N LVG +ADFGL++L + APE
Sbjct: 129 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESL 184
Query: 936 YSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K + KSDV+++GV+L E+ T G P
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 72
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE-KKVFLDWDSRYKIILGVAHGLAYLH 875
N+V+LLG C ++ ++++ G+L L E + ++ + ++ + YL
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
IHRD+ + N LVG +ADFGL++L + APE
Sbjct: 133 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESL 188
Query: 936 YSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K + KSDV+++GV+L E+ T G P
Sbjct: 189 AYNKFSIKSDVWAFGVLLWEIATYGMSP 216
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 68
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE-KKVFLDWDSRYKIILGVAHGLAYLH 875
N+V+LLG C ++ ++++ G+L L E + ++ + ++ + YL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
IHRD+ + N LVG +ADFGL++L + APE
Sbjct: 129 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESL 184
Query: 936 YSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K + KSDV+++GV+L E+ T G P
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 70
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE-KKVFLDWDSRYKIILGVAHGLAYLH 875
N+V+LLG C ++ ++++ G+L L E + ++ + ++ + YL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
IHRD+ + N LVG +ADFGL++L + APE
Sbjct: 131 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESL 186
Query: 936 YSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K + KSDV+++GV+L E+ T G P
Sbjct: 187 AYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 70
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE-KKVFLDWDSRYKIILGVAHGLAYLH 875
N+V+LLG C ++ ++++ G+L L E + ++ + ++ + YL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
IHRD+ + N LVG +ADFGL++L + APE
Sbjct: 131 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESL 186
Query: 936 YSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K + KSDV+++GV+L E+ T G P
Sbjct: 187 AYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
+D+ AE + + + IVR++G C + +L+ + G L L + + D +
Sbjct: 415 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-KNI 472
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXXXX 919
+++ V+ G+ YL +HRD+ + N+L+ Q A ++DFGL+K L
Sbjct: 473 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 529
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE K + KSDV+S+GV++ E + G++P
Sbjct: 530 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 110/278 (39%), Gaps = 55/278 (19%)
Query: 785 IAVKKLWPVKNGELPERD--QFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISN 841
+AVK L + E+D +E++ + I +HKNI+ LLG C ++ Y S
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASK 125
Query: 842 GSLAGLL------------------HEKKVFLDWDS-RYKIILGVAHGLAYL-HHDCVPP 881
G+L L E+ F D S Y++ A G+ YL C
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL----ARGMEYLASQKC--- 178
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
IHRD+ + N+LV +ADFGLA+ ++APE + T
Sbjct: 179 -IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 942 EKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRS 1000
+SDV+S+GV++ E+ T G P IP G ++ T L ++MR
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNEL--YMMMRD 294
Query: 1001 GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
C + P +RPT K + L I
Sbjct: 295 ----------------CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 71
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 8/202 (3%)
Query: 766 VGKGVSGIVY-RVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 71
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITH 127
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 944 SDVYSYGVVLLEVLTGKEPTDS 965
DV+S G+VL +L G+ P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 69
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE-KKVFLDWDSRYKIILGVAHGLAYLH 875
N+V+LLG C ++ ++++ G+L L E + ++ + ++ + YL
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
IHRD+ + N LVG +ADFGL++L + APE
Sbjct: 130 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESL 185
Query: 936 YSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K + KSDV+++GV+L E+ T G P
Sbjct: 186 AYNKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQF-SAEVQTLGSIRHKNIVRLLG 824
+GKG G V+R + +V AVK ER F AE+ +RH+NI+ +
Sbjct: 12 IGKGRFGEVWRGKWRGEEV-AVKIF-----SSREERSWFREAEIYQTVMLRHENILGFIA 65
Query: 825 CCN--NGR-TRL-LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV- 879
N NG T+L L+ DY +GSL L+ V ++ K+ L A GLA+LH + V
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTASGLAHLHMEIVG 123
Query: 880 ----PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX--XXXYGYIAPE 933
P I HRD+KS NILV +AD GLA Y+APE
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 934 Y---GYSLKITE---KSDVYSYGVVLLEV 956
++K E ++D+Y+ G+V E+
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQF-SAEVQTLGSIRHKNIVRLLG 824
+GKG G V+R + +V AVK ER F AE+ +RH+NI+ +
Sbjct: 11 IGKGRFGEVWRGKWRGEEV-AVKIF-----SSREERSWFREAEIYQTVMLRHENILGFIA 64
Query: 825 CCN--NGR-TRL-LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV- 879
N NG T+L L+ DY +GSL L+ V ++ K+ L A GLA+LH + V
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTASGLAHLHMEIVG 122
Query: 880 ----PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX--XXXYGYIAPE 933
P I HRD+KS NILV +AD GLA Y+APE
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 934 Y---GYSLKITE---KSDVYSYGVVLLEV 956
++K E ++D+Y+ G+V E+
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQF-SAEVQTLGSIRHKNIVRLLG 824
+GKG G V+R + +V AVK ER F AE+ +RH+NI+ +
Sbjct: 37 IGKGRFGEVWRGKWRGEEV-AVKIF-----SSREERSWFREAEIYQTVMLRHENILGFIA 90
Query: 825 CCN--NGR-TRL-LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV- 879
N NG T+L L+ DY +GSL L+ V ++ K+ L A GLA+LH + V
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTASGLAHLHMEIVG 148
Query: 880 ----PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX--XXXYGYIAPE 933
P I HRD+KS NILV +AD GLA Y+APE
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 934 Y---GYSLKITE---KSDVYSYGVVLLEV 956
++K E ++D+Y+ G+V E+
Sbjct: 209 VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQF-SAEVQTLGSIRHKNIVRLLG 824
+GKG G V+R + +V AVK ER F AE+ +RH+NI+ +
Sbjct: 17 IGKGRFGEVWRGKWRGEEV-AVKIF-----SSREERSWFREAEIYQTVMLRHENILGFIA 70
Query: 825 CCN--NGR-TRL-LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV- 879
N NG T+L L+ DY +GSL L+ V ++ K+ L A GLA+LH + V
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTASGLAHLHMEIVG 128
Query: 880 ----PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX--XXXYGYIAPE 933
P I HRD+KS NILV +AD GLA Y+APE
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 934 Y---GYSLKITE---KSDVYSYGVVLLEV 956
++K E ++D+Y+ G+V E+
Sbjct: 189 VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQF-SAEVQTLGSIRHKNIVRLLG 824
+GKG G V+R + +V AVK ER F AE+ +RH+NI+ +
Sbjct: 14 IGKGRFGEVWRGKWRGEEV-AVKIF-----SSREERSWFREAEIYQTVMLRHENILGFIA 67
Query: 825 CCN--NGR-TRL-LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV- 879
N NG T+L L+ DY +GSL L+ V ++ K+ L A GLA+LH + V
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTASGLAHLHMEIVG 125
Query: 880 ----PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX--XXXYGYIAPE 933
P I HRD+KS NILV +AD GLA Y+APE
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 934 Y---GYSLKITE---KSDVYSYGVVLLEV 956
++K E ++D+Y+ G+V E+
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 70
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE-KKVFLDWDSRYKIILGVAHGLAYLH 875
N+V+LLG C ++ ++++ G+L L E + ++ + ++ + YL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
IHRD+ + N LVG +ADFGL++L + APE
Sbjct: 131 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESL 186
Query: 936 YSLKITEKSDVYSYGVVLLEVLT-GKEP 962
K + KSDV+++GV+L E+ T G P
Sbjct: 187 AYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 71
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 105/241 (43%), Gaps = 26/241 (10%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 28 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 80
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYK--IILGVAHGL 871
VRL ++G + L+ DY+ H + Y + + L
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
AY+H I HRDIK N+L+ P L DFG AK Y
Sbjct: 141 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---YR 194
Query: 931 APEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNGELRERKRE 987
APE + + T DV+S G VL E+L G+ P DS + II + RE+ RE
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 254
Query: 988 F 988
Sbjct: 255 M 255
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 105/241 (43%), Gaps = 26/241 (10%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 102 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 154
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYK--IILGVAHGL 871
VRL ++G + L+ DY+ H + Y + + L
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 214
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
AY+H I HRDIK N+L+ P L DFG AK Y
Sbjct: 215 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---YR 268
Query: 931 APEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNGELRERKRE 987
APE + + T DV+S G VL E+L G+ P DS + II + RE+ RE
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 328
Query: 988 F 988
Sbjct: 329 M 329
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY ++ + +AVK + ++ L ER +F E + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 82
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLD---------WDSRYKIILGVAHG 870
VRLLG + G+ L++ + +++G L L + + ++ +A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ +HRD+ + N +V F + DFG+ + ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
APE T SD++S+GVVL E+ + E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 107/249 (42%), Gaps = 42/249 (16%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 59 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 111
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAH---- 869
VRL ++G + L+ DY+ H SR K L V +
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLY 163
Query: 870 ------GLAYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXX 922
LAY+H I HRDIK N+L+ P L DFG AK
Sbjct: 164 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 220
Query: 923 XXXXYGYIAPEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNG 979
Y APE + + T DV+S G VL E+L G+ P DS + II +
Sbjct: 221 SRY---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 277
Query: 980 ELRERKREF 988
RE+ RE
Sbjct: 278 PTREQIREM 286
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 110/278 (39%), Gaps = 55/278 (19%)
Query: 785 IAVKKLWPVKNGELPERD--QFSAEVQTLGSI-RHKNIVRLLGCCNNGRTRLLLFDYISN 841
+AVK L + E+D +E++ + I +HKNI+ LLG C ++ Y S
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASK 125
Query: 842 GSLAGLL------------------HEKKVFLDWDS-RYKIILGVAHGLAYL-HHDCVPP 881
G+L L E+ F D S Y++ A G+ YL C
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL----ARGMEYLASQKC--- 178
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
IHRD+ + N+LV +ADFGLA+ ++APE + T
Sbjct: 179 -IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 942 EKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRS 1000
+SDV+S+GV++ E+ T G P IP G ++ T L ++MR
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNEL--YMMMRD 294
Query: 1001 GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
C + P +RPT K + L I
Sbjct: 295 ----------------CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 8/202 (3%)
Query: 766 VGKGVSGIVY-RVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 72
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITH 128
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 944 SDVYSYGVVLLEVLTGKEPTDS 965
DV+S G+VL +L G+ P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 8/202 (3%)
Query: 766 VGKGVSGIVY-RVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 72
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITH 128
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 944 SDVYSYGVVLLEVLTGKEPTDS 965
DV+S G+VL +L G+ P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 8/202 (3%)
Query: 766 VGKGVSGIVY-RVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 72
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITH 128
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 944 SDVYSYGVVLLEVLTGKEPTDS 965
DV+S G+VL +L G+ P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 108/249 (43%), Gaps = 42/249 (16%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 109
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAH---- 869
VRL ++G + L+ DY+ H SR K L V +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLY 161
Query: 870 ------GLAYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXX 922
LAY+H I HRDIK N+L+ P L DFG AK
Sbjct: 162 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 218
Query: 923 XXXXYGYIAPEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNG 979
Y APE + + T DV+S G VL E+L G+ P DS + II +
Sbjct: 219 SRY---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 275
Query: 980 ELRERKREF 988
RE+ RE
Sbjct: 276 PTREQIREM 284
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY ++ + +AVK + ++ L ER +F E + ++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 79
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLD---------WDSRYKIILGVAHG 870
VRLLG + G+ L++ + +++G L L + + ++ +A G
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ +HRD+ + N +V F + DFG+ + ++
Sbjct: 140 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
APE T SD++S+GVVL E+ + E
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITSLAE 227
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 71
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 107/249 (42%), Gaps = 42/249 (16%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 51 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 103
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAH---- 869
VRL ++G + L+ DY+ H SR K L V +
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLY 155
Query: 870 ------GLAYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXX 922
LAY+H I HRDIK N+L+ P L DFG AK
Sbjct: 156 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 212
Query: 923 XXXXYGYIAPEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNG 979
Y APE + + T DV+S G VL E+L G+ P DS + II +
Sbjct: 213 SRY---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 269
Query: 980 ELRERKREF 988
RE+ RE
Sbjct: 270 PTREQIREM 278
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 72
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 107/249 (42%), Gaps = 42/249 (16%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 61 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 113
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAH---- 869
VRL ++G + L+ DY+ H SR K L V +
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLY 165
Query: 870 ------GLAYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXX 922
LAY+H I HRDIK N+L+ P L DFG AK
Sbjct: 166 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 222
Query: 923 XXXXYGYIAPEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNG 979
Y APE + + T DV+S G VL E+L G+ P DS + II +
Sbjct: 223 SRY---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 279
Query: 980 ELRERKREF 988
RE+ RE
Sbjct: 280 PTREQIREM 288
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 70
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 126
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 127 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 186
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 187 VDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 71
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 71
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 72
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 71
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 8/201 (3%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G V V + + +AVK + + + PE E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYG 71
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G + L +Y S G L + E + + + + G+ YLH I H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI-TEK 943
RDIK N+L+ + ++DFGLA +F Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 944 SDVYSYGVVLLEVLTGKEPTD 964
DV+S G+VL +L G+ P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY ++ + +AVK + ++ L ER +F E + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 82
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLD---------WDSRYKIILGVAHG 870
VRLLG + G+ L++ + +++G L L + + ++ +A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ +HRD+ + N +V F + DFG+ + ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
APE T SD++S+GVVL E+ + E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 108/249 (43%), Gaps = 42/249 (16%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 42 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 94
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAH---- 869
VRL ++G + L+ DY+ H SR K L V +
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLY 146
Query: 870 ------GLAYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXX 922
LAY+H I HRDIK N+L+ P L DFG AK
Sbjct: 147 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 203
Query: 923 XXXXYGYIAPEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNG 979
Y APE + + T DV+S G VL E+L G+ P DS + II +
Sbjct: 204 SRY---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 260
Query: 980 ELRERKREF 988
RE+ RE
Sbjct: 261 PTREQIREM 269
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY ++ + +AVK + ++ L ER +F E + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 82
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLD---------WDSRYKIILGVAHG 870
VRLLG + G+ L++ + +++G L L + + ++ +A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ +HRD+ + N +V F + DFG+ + ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
APE T SD++S+GVVL E+ + E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 107/249 (42%), Gaps = 42/249 (16%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 109
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAH---- 869
VRL ++G + L+ DY+ H SR K L V +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLY 161
Query: 870 ------GLAYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXX 922
LAY+H I HRDIK N+L+ P L DFG AK
Sbjct: 162 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 218
Query: 923 XXXXYGYIAPEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNG 979
Y APE + + T DV+S G VL E+L G+ P DS + II +
Sbjct: 219 SRY---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 275
Query: 980 ELRERKREF 988
RE+ RE
Sbjct: 276 PTREQIREM 284
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY ++ + +AVK + ++ L ER +F E + ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 81
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLD---------WDSRYKIILGVAHG 870
VRLLG + G+ L++ + +++G L L + + ++ +A G
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ +HRD+ + N +V F + DFG+ + ++
Sbjct: 142 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
APE T SD++S+GVVL E+ + E
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITSLAE 229
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY ++ + +AVK + ++ L ER +F E + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 82
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLD---------WDSRYKIILGVAHG 870
VRLLG + G+ L++ + +++G L L + + ++ +A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ +HRD+ + N +V F + DFG+ + ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
APE T SD++S+GVVL E+ + E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 26/240 (10%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 75
Query: 820 VRL-LGCCNNGRTRLLLF-----DYISNGSLAGLLHEKKVFLDWDSRYK--IILGVAHGL 871
VRL ++G + +++ DY+ H + Y + + L
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
AY+H I HRDIK N+L+ P L DFG AK Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YR 189
Query: 931 APEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNGELRERKRE 987
APE + + T DV+S G VL E+L G+ P DS + II + RE+ RE
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++F E T+ H +IV+L+G +++ + + G L L +K LD S
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFSLDLASL 113
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
++ LAYL +HRDI + N+LV L DFGL++ +
Sbjct: 114 ILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKA 169
Query: 921 XXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVL 957
++APE + T SDV+ +GV + E+L
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 68
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE------KKVFLDWDSRYKIILGVAHG 870
N+V+LLG C ++ ++++ G+L L E V L + + ++
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSA 123
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ YL IHRD+ + N LVG +ADFGL++L +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWT 179
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
APE K + KSDV+++GV+L E+ T G P
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 68
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE------KKVFLDWDSRYKIILGVAHG 870
N+V+LLG C ++ ++++ G+L L E V L + + ++
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSA 123
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ YL IHRD+ + N LVG +ADFGL++L +
Sbjct: 124 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWT 179
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
APE K + KSDV+++GV+L E+ T G P
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 73
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE------KKVFLDWDSRYKIILGVAHG 870
N+V+LLG C ++ ++++ G+L L E V L + + ++
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSA 128
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ YL IHRD+ + N LVG +ADFGL++L +
Sbjct: 129 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWT 184
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
APE K + KSDV+++GV+L E+ T G P
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 106/249 (42%), Gaps = 42/249 (16%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 35 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 87
Query: 820 VRLL------GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAH---- 869
VRL G + L+ DY+ H SR K L V +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLY 139
Query: 870 ------GLAYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXX 922
LAY+H I HRDIK N+L+ P L DFG AK
Sbjct: 140 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 196
Query: 923 XXXXYGYIAPEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNG 979
Y APE + + T DV+S G VL E+L G+ P DS + II +
Sbjct: 197 SRY---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 253
Query: 980 ELRERKREF 988
RE+ RE
Sbjct: 254 PTREQIREM 262
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 758 TRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T ++ + +G G G VY V +AVK L + E ++F E + I+H
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 66
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE------KKVFLDWDSRYKIILGVAHG 870
N+V+LLG C ++ ++++ G+L L E V L + + ++
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSA 121
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ YL IHRD+ + N LVG +ADFGL++L +
Sbjct: 122 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI-KWT 177
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
APE K + KSDV+++GV+L E+ T G P
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 108/249 (43%), Gaps = 42/249 (16%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 35 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 87
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAH---- 869
VRL ++G + L+ DY+ H SR K L V +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLY 139
Query: 870 ------GLAYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXX 922
LAY+H I HRDIK N+L+ P L DFG AK
Sbjct: 140 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 196
Query: 923 XXXXYGYIAPEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNG 979
Y APE + + T DV+S G VL E+L G+ P DS + II +
Sbjct: 197 SRY---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 253
Query: 980 ELRERKREF 988
RE+ RE
Sbjct: 254 PTREQIREM 262
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 800 ERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE------KKV 853
E ++F E + I+H N+V+LLG C ++ ++++ G+L L E V
Sbjct: 50 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV 109
Query: 854 FLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXX 913
L + + ++ + YL IHRD+ + N LVG +ADFGL++L
Sbjct: 110 VLLY-----MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 161
Query: 914 XXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE K + KSDV+++GV+L E+ T G P
Sbjct: 162 DTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 26/241 (10%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 24 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 76
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYK--IILGVAHGL 871
VRL ++G + L+ DY+ H + Y + + L
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 136
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
AY+H I HRDIK N+L+ P L DFG AK Y
Sbjct: 137 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YR 190
Query: 931 APEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNGELRERKRE 987
APE + + T DV+S G VL E+L G+ P DS + II + RE+ RE
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 250
Query: 988 F 988
Sbjct: 251 M 251
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 15/206 (7%)
Query: 764 NIVGKGVSGIVYRVE----IPSRQVIAVK---KLWPVKNGELPERDQFSAEVQTLGSIRH 816
++GKG G V++V + ++ A+K K V+N + + AE L ++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAK--DTAHTKAERNILEEVKH 80
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHH 876
IV L+ G L+ +Y+S G L L + +F++ D+ + ++ L +LH
Sbjct: 81 PFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME-DTACFYLAEISMALGHLHQ 139
Query: 877 DCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGY 936
II+RD+K NI++ Q L DFGL K Y+APE
Sbjct: 140 KG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAPEILM 194
Query: 937 SLKITEKSDVYSYGVVLLEVLTGKEP 962
D +S G ++ ++LTG P
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 83/205 (40%), Gaps = 8/205 (3%)
Query: 764 NIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKN--GELPERDQFSAEVQTLGSIRHKNIVR 821
++GKG G V + +V K+ K + E+ S L +++H +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 822 LLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPP 881
L + DYI+ G L L ++ FL+ +R+ +A L YLH
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLHSLN--- 159
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
I++RD+K NIL+ Q L DFGL K Y+APE +
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVLHKQPYD 217
Query: 942 EKSDVYSYGVVLLEVLTGKEPTDSR 966
D + G VL E+L G P SR
Sbjct: 218 RTVDWWCLGAVLYEMLYGLPPFYSR 242
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 107/249 (42%), Gaps = 42/249 (16%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 36 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 88
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAH---- 869
VRL ++G + L+ DY+ H SR K L V +
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLY 140
Query: 870 ------GLAYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXX 922
LAY+H I HRDIK N+L+ P L DFG AK
Sbjct: 141 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 197
Query: 923 XXXXYGYIAPEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNG 979
Y APE + + T DV+S G VL E+L G+ P DS + II +
Sbjct: 198 SRY---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 254
Query: 980 ELRERKREF 988
RE+ RE
Sbjct: 255 PTREQIREM 263
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++F E T+ H +IV+L+G +++ + + G L L +K LD S
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFSLDLASL 113
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
++ LAYL +HRDI + N+LV L DFGL++ +
Sbjct: 114 ILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKA 169
Query: 921 XXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVL 957
++APE + T SDV+ +GV + E+L
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 26/241 (10%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 75
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYK--IILGVAHGL 871
VRL ++G + L+ DY+ H + Y + + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
AY+H I HRDIK N+L+ P L DFG AK Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YR 189
Query: 931 APEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNGELRERKRE 987
APE + + T DV+S G VL E+L G+ P DS + II + RE+ RE
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 988 F 988
Sbjct: 250 M 250
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ VE S + V K ++P +Q AE++ L S+ H NI+++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP-MEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 826 CNNGRTRLLLFDYISNGSLAGLL---HEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+ ++ + G L + + L +++ + + LAY H V
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV--- 145
Query: 883 IHRDIKSNNIL---VGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
+H+D+K NIL P + DFGLA+LF Y+APE +
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTAL---YMAPEV-FKRD 201
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
+T K D++S GVV+ +LTG P
Sbjct: 202 VTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 108/249 (43%), Gaps = 42/249 (16%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 31 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 83
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAH---- 869
VRL ++G + L+ DY+ H SR K L V +
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLY 135
Query: 870 ------GLAYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXX 922
LAY+H I HRDIK N+L+ P L DFG AK
Sbjct: 136 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 192
Query: 923 XXXXYGYIAPEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNG 979
Y APE + + T DV+S G VL E+L G+ P DS + II +
Sbjct: 193 SRY---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 249
Query: 980 ELRERKREF 988
RE+ RE
Sbjct: 250 PTREQIREM 258
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 26/241 (10%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 75
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYK--IILGVAHGL 871
VRL ++G + L+ DY+ H + Y + + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
AY+H I HRDIK N+L+ P L DFG AK Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YR 189
Query: 931 APEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNGELRERKRE 987
APE + + T DV+S G VL E+L G+ P DS + II + RE+ RE
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 988 F 988
Sbjct: 250 M 250
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 117/280 (41%), Gaps = 50/280 (17%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ +AVK + P G + + F AE + +++H +V+L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKP---GSM-SVEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKK-------VFLDWDSRYKIILGVAHGLAYLHHDC 878
++ ++++ GSL L + +D+ ++ +A G+A++
Sbjct: 246 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQRN 298
Query: 879 VPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
IHRD+++ NILV +ADFGLA++ + APE
Sbjct: 299 Y---IHRDLRAANILVSASLVCKIADFGLARV-----------GAKFPIKWTAPEAINFG 344
Query: 939 KITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLM 998
T KSDV+S+G++L+E++T RIP E L+R M
Sbjct: 345 SFTIKSDVWSFGILLMEIVTY-----GRIPYPGM-----------SNPEVIRALERGYRM 388
Query: 999 RSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
E ++ + + C PEERPT + + ++L +
Sbjct: 389 PRPENCPE--ELYNIMMRCWKNRPEERPTFEYIQSVLDDF 426
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 26/241 (10%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 27 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 79
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYK--IILGVAHGL 871
VRL ++G + L+ DY+ H + Y + + L
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 139
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
AY+H I HRDIK N+L+ P L DFG AK Y
Sbjct: 140 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YR 193
Query: 931 APEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNGELRERKRE 987
APE + + T DV+S G VL E+L G+ P DS + II + RE+ RE
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 253
Query: 988 F 988
Sbjct: 254 M 254
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 105/240 (43%), Gaps = 26/240 (10%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ L ++ + E+Q + + H NI
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNI 75
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYK--IILGVAHGL 871
VRL ++G + L+ DY+ H + Y + + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
AY+H I HRDIK N+L+ P L DFG AK Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---YR 189
Query: 931 APEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNGELRERKRE 987
APE + + T DV+S G VL E+L G+ P DS + II + RE+ RE
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 10/200 (5%)
Query: 766 VGKGVSGIVYRVEIPSRQV-IAVKKLW--PVKNGELPERDQFSAEVQTLGSIRHKNIVRL 822
+G G VY E + +A+K ++ P + E +R F EV + H+NIV +
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKR--FEREVHNSSQLSHQNIVSM 76
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+ L+ +YI +L+ + E L D+ + G+ + H I
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAHD---MRI 132
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITE 942
+HRDIK NIL+ + DFG+AK Y +PE E
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ-YFSPEQAKGEATDE 191
Query: 943 KSDVYSYGVVLLEVLTGKEP 962
+D+YS G+VL E+L G+ P
Sbjct: 192 CTDIYSIGIVLYEMLVGEPP 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++F E T+ H +IV+L+G +++ + + G L L +K LD S
Sbjct: 83 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYSLDLASL 141
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
++ LAYL +HRDI + N+LV L DFGL++ +
Sbjct: 142 ILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKA 197
Query: 921 XXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVL 957
++APE + T SDV+ +GV + E+L
Sbjct: 198 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 764 NIVGKGVSGIVYRVE----IPSRQVIAVK---KLWPVKNGELPERDQFSAEVQTLGSIRH 816
++GKG G V++V + ++ A+K K V+N + + AE L ++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAK--DTAHTKAERNILEEVKH 80
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHH 876
IV L+ G L+ +Y+S G L L + +F++ D+ + ++ L +LH
Sbjct: 81 PFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME-DTACFYLAEISMALGHLHQ 139
Query: 877 DCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGY 936
II+RD+K NI++ Q L DFGL K Y+APE
Sbjct: 140 KG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAPEILM 194
Query: 937 SLKITEKSDVYSYGVVLLEVLTGKEP 962
D +S G ++ ++LTG P
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++F E T+ H +IV+L+G +++ + + G L L +K LD S
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYSLDLASL 113
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
++ LAYL +HRDI + N+LV L DFGL++ +
Sbjct: 114 ILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKA 169
Query: 921 XXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVL 957
++APE + T SDV+ +GV + E+L
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 774 VYRVEIPSRQV-IAVKKLWPVKNG-ELPERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRT 831
VYR+ +Q+ +A+K L K G E + ++ E Q + + + IVRL+G C
Sbjct: 30 VYRMR--KKQIDVAIKVL---KQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEA 83
Query: 832 RLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNN 891
+L+ + G L L K+ + + +++ V+ G+ YL +HRD+ + N
Sbjct: 84 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARN 140
Query: 892 ILVGPQFEAFLADFGLAK-LFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYG 950
+L+ + A ++DFGL+K L + APE K + +SDV+SYG
Sbjct: 141 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 200
Query: 951 VVLLEVLT-GKEP 962
V + E L+ G++P
Sbjct: 201 VTMWEALSYGQKP 213
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++F E T+ H +IV+L+G +++ + + G L L +K LD S
Sbjct: 58 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYSLDLASL 116
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
++ LAYL +HRDI + N+LV L DFGL++ +
Sbjct: 117 ILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKA 172
Query: 921 XXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVL 957
++APE + T SDV+ +GV + E+L
Sbjct: 173 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++F E T+ H +IV+L+G +++ + + G L L +K LD S
Sbjct: 57 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYSLDLASL 115
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
++ LAYL +HRDI + N+LV L DFGL++ +
Sbjct: 116 ILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKA 171
Query: 921 XXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVL 957
++APE + T SDV+ +GV + E+L
Sbjct: 172 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++F E T+ H +IV+L+G +++ + + G L L +K LD S
Sbjct: 52 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYSLDLASL 110
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
++ LAYL +HRDI + N+LV L DFGL++ +
Sbjct: 111 ILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKA 166
Query: 921 XXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVL 957
++APE + T SDV+ +GV + E+L
Sbjct: 167 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++F E T+ H +IV+L+G +++ + + G L L +K LD S
Sbjct: 60 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYSLDLASL 118
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
++ LAYL +HRDI + N+LV L DFGL++ +
Sbjct: 119 ILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKA 174
Query: 921 XXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVL 957
++APE + T SDV+ +GV + E+L
Sbjct: 175 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++F E T+ H +IV+L+G +++ + + G L L +K LD S
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYSLDLASL 113
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
++ LAYL +HRDI + N+LV L DFGL++ +
Sbjct: 114 ILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKA 169
Query: 921 XXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVL 957
++APE + T SDV+ +GV + E+L
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 759 RLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHK 817
R ++GKG G ++ + + Q AVK + + + +++ EVQ L + H
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 818 NIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHD 877
NI++L + L+ + + G L + +K F + D+ +II V G+ Y+H +
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGITYMHKN 151
Query: 878 CVPPIIHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY 934
I+HRD+K N+L+ + + + DFGL+ F YIAPE
Sbjct: 152 ---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY---YIAPEV 205
Query: 935 GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+ EK DV+S GV+L +L+G P
Sbjct: 206 LHG-TYDEKCDVWSTGVILYILLSGCPP 232
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 90/219 (41%), Gaps = 35/219 (15%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAE--VQTLGSIRHKNIVRL 822
++G+G G VY+ + R V VK R F E + + + H NI R
Sbjct: 20 LIGRGRYGAVYKGSLDERPV-------AVKVFSFANRQNFINEKNIYRVPLMEHDNIARF 72
Query: 823 L----GCCNNGRTR-LLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHD 877
+ +GR LL+ +Y NGSL L DW S ++ V GLAYLH +
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAYLHTE 130
Query: 878 C------VPPIIHRDIKSNNILVGPQFEAFLADFGLA------KLFXXXXXXXXXXXXXX 925
P I HRD+ S N+LV ++DFGL+ +L
Sbjct: 131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVG 190
Query: 926 XYGYIAPEY---GYSLKITEKS----DVYSYGVVLLEVL 957
Y+APE +L+ E + D+Y+ G++ E+
Sbjct: 191 TIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G V+ + +AVK L P G + + F E + +++H +VRL
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP---GTMSVQ-AFLEEANLMKTLQHDKLVRLYAV 75
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIIL--------GVAHGLAYLHHD 877
++ ++++ GSL FL D K++L +A G+AY+
Sbjct: 76 VTKEEPIYIITEFMAKGSLLD-------FLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 878 CVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYS 937
IHRD+++ N+LV +ADFGLA++ + APE
Sbjct: 129 ---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINF 184
Query: 938 LKITEKSDVYSYGVVLLEVLT-GKEPTDSR 966
T KS+V+S+G++L E++T GK P R
Sbjct: 185 GCFTIKSNVWSFGILLYEIVTYGKIPYPGR 214
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 80/307 (26%), Positives = 123/307 (40%), Gaps = 47/307 (15%)
Query: 759 RLSDTNIVGKGVSGIVYRVE------IPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTL 811
RL +G+G G V + + + +AVK L K G E +E++ L
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML---KEGATHSEHRALMSELKIL 86
Query: 812 GSI-RHKNIVRLLGCCNN-GRTRLLLFDYISNGSLAGLLHEK-------------KVFLD 856
I H N+V LLG C G +++ ++ G+L+ L K K FL
Sbjct: 87 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLT 146
Query: 857 WDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXX 916
+ VA G+ +L IHRD+ + NIL+ + + DFGLA+
Sbjct: 147 LEHLIXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 917 XXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIIT 975
++APE + T +SDV+S+GV+L E+ + G P D
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 263
Query: 976 WVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAML 1035
G R R ++TT EM Q + L C + P +RPT ++ L
Sbjct: 264 LKEGT-RMRAPDYTT--------------PEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
Query: 1036 KEIRHEN 1042
+ N
Sbjct: 306 GNLLQAN 312
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 28/228 (12%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPE-----RDQFS 805
+ + + +++G+GVS +V R V + AVK + PE R+
Sbjct: 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATR 147
Query: 806 AEVQTLGSIR-HKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII 864
E L + H +I+ L+ + L+FD + G L L EK + ++R I+
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETR-SIM 206
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ +++LH + I+HRD+K NIL+ + L+DFG +
Sbjct: 207 RSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFS---CHLEPGEKLRELC 260
Query: 925 XXYGYIAPEY----------GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
GY+APE GY ++ D+++ GV+L +L G P
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEV----DLWACGVILFTLLAGSPP 304
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 11/220 (5%)
Query: 743 FTPFQKLNFSVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERD 802
T QK+ DD ++S+ +G G G+V++V ++ +KL ++ + R+
Sbjct: 56 LTQKQKVGELKDDDFEKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRN 111
Query: 803 QFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYK 862
Q E+Q L IV G + + +++ GSL +L +K + K
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGK 170
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
+ + V GL YL I+HRD+K +NILV + E L DFG++
Sbjct: 171 VSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 228
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y++PE + +SD++S G+ L+E+ G+ P
Sbjct: 229 R----SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 765 IVGKGVSGIVYRVEI----PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++GKG G+VY E +R A+K L + E+ + + F E + + H N++
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGLNHPNVL 85
Query: 821 RLLGCC--NNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDC 878
L+G G +LL Y+ +G L + + L VA G+ YL
Sbjct: 86 ALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ- 143
Query: 879 VPPIIHRDIKSNNILVGPQFEAFLADFGLAK--LFXXXXXXXXXXXXXXXYGYIAPEYGY 936
+HRD+ + N ++ F +ADFGLA+ L + A E
Sbjct: 144 --KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ 201
Query: 937 SLKITEKSDVYSYGVVLLEVLTGKEP 962
+ + T KSDV+S+GV+L E+LT P
Sbjct: 202 TYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 11/223 (4%)
Query: 743 FTPFQKLNFSVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERD 802
T QK+ DD ++S+ +G G G+V++V ++ +KL ++ + R+
Sbjct: 13 LTQKQKVGELKDDDFEKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRN 68
Query: 803 QFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYK 862
Q E+Q L IV G + + +++ GSL +L +K + K
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGK 127
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
+ + V GL YL I+HRD+K +NILV + E L DFG++
Sbjct: 128 VSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 185
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
Y++PE + +SD++S G+ L+E+ G+ P S
Sbjct: 186 R----SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGS 224
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 766 VGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIR-HKNIVRLL 823
+GKG GIV++ ++ + +V+AVKK++ + F E+ L + H+NIV LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 824 GC--CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPP 881
+N R L+FDY+ A + + L+ + ++ + + YLH
Sbjct: 76 NVLRADNDRDVYLVFDYMETDLHAVI---RANILEPVHKQYVVYQLIKVIKYLHSGG--- 129
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX-------------------XX 922
++HRD+K +NIL+ + +ADFGL++ F
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 923 XXXXYGYIAPEYGY-SLKITEKSDVYSYGVVLLEVLTGK 960
Y APE S K T+ D++S G +L E+L GK
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 104/240 (43%), Gaps = 26/240 (10%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ K + + E+Q + + H NI
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLDHCNI 75
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYK--IILGVAHGL 871
VRL ++G + L+ DY+ H + Y + + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
AY+H I HRDIK N+L+ P L DFG AK Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---YR 189
Query: 931 APEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNGELRERKRE 987
APE + + T DV+S G VL E+L G+ P DS + II + RE+ RE
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++F E T+ H +IV+L+G +++ + + G L L +K LD S
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFSLDLASL 493
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
++ LAYL +HRDI + N+LV L DFGL++ +
Sbjct: 494 ILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKA 549
Query: 921 XXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVL 957
++APE + T SDV+ +GV + E+L
Sbjct: 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHG 870
L + H I+R+ G + + ++ DYI G L LL + + F + +++ V
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLA 118
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
L YLH II+RD+K NIL+ + DFG AK YI
Sbjct: 119 LEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTP-----DYI 170
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEP-TDSRIPDGAHIITWVNGELR 982
APE + + D +S+G+++ E+L G P DS I +N ELR
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI--LNAELR 221
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++F E T+ H +IV+L+G +++ + + G L L +K LD S
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFSLDLASL 493
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
++ LAYL +HRDI + N+LV L DFGL++ +
Sbjct: 494 ILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKA 549
Query: 921 XXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVL 957
++APE + T SDV+ +GV + E+L
Sbjct: 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 104/240 (43%), Gaps = 26/240 (10%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ K + + E+Q + + H NI
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLDHCNI 75
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYK--IILGVAHGL 871
VRL ++G + L+ DY+ H + Y + + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
AY+H I HRDIK N+L+ P L DFG AK Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---YR 189
Query: 931 APEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNGELRERKRE 987
APE + + T DV+S G VL E+L G+ P DS + II + RE+ RE
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 18/183 (9%)
Query: 783 QVIAVKKLWPVKNGELPE-RDQFSAEVQTLGSIRHKNIVRLLGCCNNG--RTRLLLFDYI 839
+++AVK L K G P+ R + E++ L ++ H++IV+ GCC + ++ L+ +Y+
Sbjct: 38 EMVAVKAL---KEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 94
Query: 840 SNGSLAGLLHEKKVFLDWDSRYKIIL---GVAHGLAYLHHDCVPPIIHRDIKSNNILVGP 896
GSL L V L +++L + G+AYLH IHR + + N+L+
Sbjct: 95 PLGSLRDYLPRHCVGLA-----QLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDN 146
Query: 897 QFEAFLADFGLAKLFXXXXXXXXXXXXXXX-YGYIAPEYGYSLKITEKSDVYSYGVVLLE 955
+ DFGLAK + APE K SDV+S+GV L E
Sbjct: 147 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYE 206
Query: 956 VLT 958
+LT
Sbjct: 207 LLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 18/183 (9%)
Query: 783 QVIAVKKLWPVKNGELPE-RDQFSAEVQTLGSIRHKNIVRLLGCCNNG--RTRLLLFDYI 839
+++AVK L K G P+ R + E++ L ++ H++IV+ GCC + ++ L+ +Y+
Sbjct: 39 EMVAVKAL---KEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 95
Query: 840 SNGSLAGLLHEKKVFLDWDSRYKIIL---GVAHGLAYLHHDCVPPIIHRDIKSNNILVGP 896
GSL L V L +++L + G+AYLH IHR + + N+L+
Sbjct: 96 PLGSLRDYLPRHCVGLA-----QLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDN 147
Query: 897 QFEAFLADFGLAKLFXXXXXXXXXXXXXXX-YGYIAPEYGYSLKITEKSDVYSYGVVLLE 955
+ DFGLAK + APE K SDV+S+GV L E
Sbjct: 148 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYE 207
Query: 956 VLT 958
+LT
Sbjct: 208 LLT 210
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 759 RLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHK 817
R ++GKG G ++ + + Q AVK + + + +++ EVQ L + H
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 818 NIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHD 877
NI++L + L+ + + G L + +K F + D+ +II V G+ Y+H +
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGITYMHKN 169
Query: 878 CVPPIIHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY 934
I+HRD+K N+L+ + + + DFGL+ F YIAPE
Sbjct: 170 ---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY---YIAPEV 223
Query: 935 GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+ EK DV+S GV+L +L+G P
Sbjct: 224 LHGT-YDEKCDVWSTGVILYILLSGCPP 250
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 759 RLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHK 817
R ++GKG G ++ + + Q AVK + + + +++ EVQ L + H
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 818 NIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHD 877
NI++L + L+ + + G L + +K F + D+ +II V G+ Y+H +
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGITYMHKN 168
Query: 878 CVPPIIHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY 934
I+HRD+K N+L+ + + + DFGL+ F YIAPE
Sbjct: 169 ---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY---YIAPEV 222
Query: 935 GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+ EK DV+S GV+L +L+G P
Sbjct: 223 LHGT-YDEKCDVWSTGVILYILLSGCPP 249
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 759 RLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHK 817
R ++GKG G ++ + + Q AVK + + + +++ EVQ L + H
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 818 NIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHD 877
NI++L + L+ + + G L + +K F + D+ +II V G+ Y+H +
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGITYMHKN 145
Query: 878 CVPPIIHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY 934
I+HRD+K N+L+ + + + DFGL+ F YIAPE
Sbjct: 146 ---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY---YIAPEV 199
Query: 935 GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+ EK DV+S GV+L +L+G P
Sbjct: 200 LHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 7/164 (4%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
+D+ AE + + + IVR++G C + +L+ + G L L + + D +
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-KNI 113
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXXXX 919
+++ V+ G+ YL +HRD+ + N+L+ Q A ++DFGL+K L
Sbjct: 114 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKA 170
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE K + KSDV+S+GV++ E + G++P
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 765 IVGK-GVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLL 823
I+G+ G G VY+ + V+A K+ K+ E E + + E+ L S H NIV+LL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDILASCDHPNIVKLL 73
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
+L ++ + G++ ++ E + L + L YLH + II
Sbjct: 74 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KII 130
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE---------- 933
HRD+K+ NIL + LADFG++ Y ++APE
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPY-WMAPEVVMCETSKDR 189
Query: 934 -YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y Y K+DV+S G+ L+E+ + P
Sbjct: 190 PYDY------KADVWSLGITLIEMAEIEPP 213
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein
Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain)
Length = 276
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 760 LSDTNIVGKGVSGIVYRVEIPSRQV----IAVKKLWPVKNGELPERDQFSAEVQTLGSIR 815
L DT +G G G +V+I Q+ +AVK L K L + E+Q L R
Sbjct: 15 LGDT--LGVGTFG---KVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 816 HKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
H +I++L + ++ +Y+S G L + + + ++R ++ + + Y H
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH 128
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY- 934
V +HRD+K N+L+ A +ADFGL+ + Y APE
Sbjct: 129 RHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSP---NYAAPEVI 182
Query: 935 GYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDR 994
L + D++S GV+L +L G P D H+ T L ++ R +
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-----HVPT-----LFKKIRGGVFYIPE 232
Query: 995 QLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDV 1031
L T + MLQV P +R T+KD+
Sbjct: 233 YLNRSVATLLMHMLQV----------DPLKRATIKDI 259
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
+D+ AE + + + IVR++G C + +L+ + G L L + + D +
Sbjct: 50 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-KNI 107
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXXXX 919
+++ V+ G+ YL +HRD+ + N+L+ Q A ++DFGL+K L
Sbjct: 108 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 164
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE K + KSDV+S+GV++ E + G++P
Sbjct: 165 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
+D+ AE + + + IVR++G C + +L+ + G L L + + D +
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-KNI 119
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXXXX 919
+++ V+ G+ YL +HRD+ + N+L+ Q A ++DFGL+K L
Sbjct: 120 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE K + KSDV+S+GV++ E + G++P
Sbjct: 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 766 VGKGVSGIVYRVEIPSR-QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G +GIV + S +++AVKK+ K R+ EV + +H+N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYN 215
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G ++ +++ G+L ++ + ++ + + L V L+ LH V IH
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGV---IH 270
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIKS++IL+ L+DFG ++APE L +
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY--WMAPELISRLPYGPEV 328
Query: 945 DVYSYGVVLLEVLTGKEP 962
D++S G++++E++ G+ P
Sbjct: 329 DIWSLGIMVIEMVDGEPP 346
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
+D+ AE + + + IVR++G C + +L+ + G L L + + D +
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-KNI 129
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXXXX 919
+++ V+ G+ YL +HRD+ + N+L+ Q A ++DFGL+K L
Sbjct: 130 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE K + KSDV+S+GV++ E + G++P
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
+D+ AE + + + IVR++G C + +L+ + G L L + + D +
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-KNI 129
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXXXX 919
+++ V+ G+ YL +HRD+ + N+L+ Q A ++DFGL+K L
Sbjct: 130 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE K + KSDV+S+GV++ E + G++P
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
+D+ AE + + + IVR++G C + +L+ + G L L + + D +
Sbjct: 52 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-KNI 109
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXXXX 919
+++ V+ G+ YL +HRD+ + N+L+ Q A ++DFGL+K L
Sbjct: 110 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 166
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE K + KSDV+S+GV++ E + G++P
Sbjct: 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
+D+ AE + + + IVR++G C + +L+ + G L L + + D +
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-KNI 113
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXXXX 919
+++ V+ G+ YL +HRD+ + N+L+ Q A ++DFGL+K L
Sbjct: 114 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 170
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE K + KSDV+S+GV++ E + G++P
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
+D+ AE + + + IVR++G C + +L+ + G L L + + D +
Sbjct: 70 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-KNI 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK-LFXXXXXXXX 919
+++ V+ G+ YL +HRD+ + N+L+ Q A ++DFGL+K L
Sbjct: 128 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 184
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE K + KSDV+S+GV++ E + G++P
Sbjct: 185 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 105/241 (43%), Gaps = 26/241 (10%)
Query: 761 SDTNIVGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+DT ++G G G+VY+ ++ S +++A+KK+ K + + E+Q + + H NI
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLDHCNI 75
Query: 820 VRL-LGCCNNGRTRL-----LLFDYISNGSLAGLLHEKKVFLDWDSRYK--IILGVAHGL 871
VRL ++G + L+ DY+ H + Y + + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
AY+H I HRDIK N+L+ P L DFG AK Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YR 189
Query: 931 APEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNGELRERKRE 987
APE + + T DV+S G VL E+L G+ P DS + II + RE+ RE
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 988 F 988
Sbjct: 250 M 250
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 11/220 (5%)
Query: 743 FTPFQKLNFSVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERD 802
T QK+ DD ++S+ +G G G+V++V ++ +KL ++ + R+
Sbjct: 21 LTQKQKVGELKDDDFEKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRN 76
Query: 803 QFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYK 862
Q E+Q L IV G + + +++ GSL +L +K + K
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGK 135
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
+ + V GL YL I+HRD+K +NILV + E L DFG++
Sbjct: 136 VSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 193
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y++PE + +SD++S G+ L+E+ G+ P
Sbjct: 194 R----SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G VY+ + V+A K+ K+ E E + + E+ L S H NIV+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
+L ++ + G++ ++ E + L + L YLH + IIHR
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-----------Y 934
D+K+ NIL + LADFG++ ++APE Y
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 935 GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y K+DV+S G+ L+E+ + P
Sbjct: 218 DY------KADVWSLGITLIEMAEIEPP 239
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 118/270 (43%), Gaps = 31/270 (11%)
Query: 783 QVIAVKKLWPVKNGELPE-RDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYI 839
+++AVK L K P+ R + E+ L ++ H++I++ GCC + G L L+ +Y+
Sbjct: 44 EMVAVKAL---KADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 840 SNGSLAGLLHEKKVFLDWDSRYKIIL---GVAHGLAYLHHDCVPPIIHRDIKSNNILVGP 896
GSL L + L +++L + G+AYLH IHR++ + N+L+
Sbjct: 101 PLGSLRDYLPRHSIGLA-----QLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDN 152
Query: 897 QFEAFLADFGLAKLFXXXXXXXXXXXXXXX-YGYIAPEYGYSLKITEKSDVYSYGVVLLE 955
+ DFGLAK + APE K SDV+S+GV L E
Sbjct: 153 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 212
Query: 956 VLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQE----MLQVL 1011
+LT + + S +I G++ T+L L+ G ++ +V
Sbjct: 213 LLTHCDSSQSPPTKFLELIGIAQGQM--------TVLRLTELLERGERLPRPDKCPCEVY 264
Query: 1012 GVALLCVNPCPEERPTMKDVTAMLKEIRHE 1041
+ C RPT +++ +LK + HE
Sbjct: 265 HLMKNCWETEASFRPTFENLIPILKTV-HE 293
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated
Protein Kinase Alpha-2 Subunit Mutant (T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 760 LSDTNIVGKGVSGIVYRVEIPSRQV----IAVKKLWPVKNGELPERDQFSAEVQTLGSIR 815
L DT +G G G +V+I Q+ +AVK L K L + E+Q L R
Sbjct: 15 LGDT--LGVGTFG---KVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 816 HKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
H +I++L + ++ +Y+S G L + + + ++R ++ + + Y H
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH 128
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY- 934
V +HRD+K N+L+ A +ADFGL+ + Y APE
Sbjct: 129 RHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSP---NYAAPEVI 182
Query: 935 GYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDR 994
L + D++S GV+L +L G P D H+ T L ++ R +
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-----HVPT-----LFKKIRGGVFYIPE 232
Query: 995 QLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDV 1031
L T + MLQV P +R T+KD+
Sbjct: 233 YLNRSVATLLMHMLQV----------DPLKRATIKDI 259
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 118/270 (43%), Gaps = 31/270 (11%)
Query: 783 QVIAVKKLWPVKNGELPE-RDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRL-LLFDYI 839
+++AVK L K P+ R + E+ L ++ H++I++ GCC + G L L+ +Y+
Sbjct: 44 EMVAVKAL---KADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 840 SNGSLAGLLHEKKVFLDWDSRYKIIL---GVAHGLAYLHHDCVPPIIHRDIKSNNILVGP 896
GSL L + L +++L + G+AYLH IHR++ + N+L+
Sbjct: 101 PLGSLRDYLPRHSIGLA-----QLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDN 152
Query: 897 QFEAFLADFGLAKLFXXXXXXXXXXXXXXX-YGYIAPEYGYSLKITEKSDVYSYGVVLLE 955
+ DFGLAK + APE K SDV+S+GV L E
Sbjct: 153 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 212
Query: 956 VLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQE----MLQVL 1011
+LT + + S +I G++ T+L L+ G ++ +V
Sbjct: 213 LLTHCDSSQSPPTKFLELIGIAQGQM--------TVLRLTELLERGERLPRPDKCPCEVY 264
Query: 1012 GVALLCVNPCPEERPTMKDVTAMLKEIRHE 1041
+ C RPT +++ +LK + HE
Sbjct: 265 HLMKNCWETEASFRPTFENLIPILKTV-HE 293
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 101/227 (44%), Gaps = 27/227 (11%)
Query: 749 LNFSVDDVVTR-LSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQF-SA 806
L F V V R ++ VGKG G V+R V AVK E+ F
Sbjct: 27 LPFLVQRTVARQITLLECVGKGRYGEVWRGSWQGENV-AVKIF-----SSRDEKSWFRET 80
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGR---TRLLLF-DYISNGSLAGLLHEKKVFLDWDSRYK 862
E+ +RH+NI+ + R T+L L Y GSL L + LD S +
Sbjct: 81 ELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLR 138
Query: 863 IILGVAHGLAYLHHDCV-----PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXX 917
I+L +A GLA+LH + P I HRD+KS NILV + +AD GLA +
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 198
Query: 918 XXXXX--XXXXYGYIAPEY-GYSLKIT-----EKSDVYSYGVVLLEV 956
Y+APE ++++ ++ D++++G+VL EV
Sbjct: 199 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G VY+ + V+A K+ K+ E E + + E+ L S H NIV+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
+L ++ + G++ ++ E + L + L YLH + IIHR
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-----------Y 934
D+K+ NIL + LADFG++ ++APE Y
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 935 GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y K+DV+S G+ L+E+ + P
Sbjct: 218 DY------KADVWSLGITLIEMAEIEPP 239
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
EV+ L + H NI++L + + ++ + + G L + ++K F + D+ +II
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-RIIKQ 129
Query: 867 VAHGLAYLH-HDCVPPIIHRDIKSNNILVGPQ---FEAFLADFGLAKLFXXXXXXXXXXX 922
V G+ Y+H H+ I+HRD+K NIL+ + + + DFGL+ F
Sbjct: 130 VFSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 923 XXXXYGYIAPEYGYSLKIT--EKSDVYSYGVVLLEVLTGKEP 962
YIAPE L+ T EK DV+S GV+L +L+G P
Sbjct: 186 TAY---YIAPEV---LRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
EV+ L + H NI++L + + ++ + + G L + ++K F + D+ +II
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-RIIKQ 129
Query: 867 VAHGLAYLH-HDCVPPIIHRDIKSNNILVGPQ---FEAFLADFGLAKLFXXXXXXXXXXX 922
V G+ Y+H H+ I+HRD+K NIL+ + + + DFGL+ F
Sbjct: 130 VFSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 923 XXXXYGYIAPEYGYSLKIT--EKSDVYSYGVVLLEVLTGKEP 962
YIAPE L+ T EK DV+S GV+L +L+G P
Sbjct: 186 TAY---YIAPEV---LRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 774 VYRVEIPSRQV-IAVKKLWPVKNG-ELPERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRT 831
VYR+ +Q+ +A+K L K G E + ++ E Q + + + IVRL+G C
Sbjct: 356 VYRMR--KKQIDVAIKVL---KQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEA 409
Query: 832 RLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNN 891
+L+ + G L L K+ + + +++ V+ G+ YL +HR++ + N
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARN 466
Query: 892 ILVGPQFEAFLADFGLAK-LFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYG 950
+L+ + A ++DFGL+K L + APE K + +SDV+SYG
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 526
Query: 951 VVLLEVLT-GKEP 962
V + E L+ G++P
Sbjct: 527 VTMWEALSYGQKP 539
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 79/305 (25%), Positives = 127/305 (41%), Gaps = 42/305 (13%)
Query: 759 RLSDTNIVGKGVSGIVYRVE------IPSRQVIAVKKLWPVKNGEL-PERDQFSAEVQTL 811
RL+ +G+G G V + + + +AVK L K G E +E++ L
Sbjct: 29 RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEGATHSEHRALMSELKIL 85
Query: 812 GSI-RHKNIVRLLGCCNN-GRTRLLLFDYISNGSLAGLLHEKK-VFLDW---DSRYKIIL 865
I H N+V LLG C G +++ ++ G+L+ L K+ F+ + + YK L
Sbjct: 86 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFL 145
Query: 866 GVAHGLAY-------LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX 918
+ H + Y + IHRD+ + NIL+ + + DFGLA+
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 919 XXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWV 977
++APE + T +SDV+S+GV+L E+ + G P D
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
Query: 978 NGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKE 1037
G R R ++TT EM Q + L C + P +RPT ++ L
Sbjct: 266 EGT-RMRAPDYTT--------------PEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 307
Query: 1038 IRHEN 1042
+ N
Sbjct: 308 LLQAN 312
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G VY+ + V+A K+ K+ E E + + E+ L S H NIV+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
+L ++ + G++ ++ E + L + L YLH + IIHR
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-----------Y 934
D+K+ NIL + LADFG++ ++APE Y
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPY 217
Query: 935 GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y K+DV+S G+ L+E+ + P
Sbjct: 218 DY------KADVWSLGITLIEMAEIEPP 239
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY ++ + +AVK + ++ L ER +F E + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 82
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLD---------WDSRYKIILGVAHG 870
VRLLG + G+ L++ + +++G L L + + ++ +A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ +HR++ + N +V F + DFG+ + ++
Sbjct: 143 MAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
APE T SD++S+GVVL E+ + E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 8/182 (4%)
Query: 785 IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSL 844
+AVK L K L + E+Q L RH +I++L + ++ +Y+S G L
Sbjct: 44 VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGEL 103
Query: 845 AGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLAD 904
+ + + +SR ++ + G+ Y H V +HRD+K N+L+ A +AD
Sbjct: 104 FDYICKNGRLDEKESR-RLFQQILSGVDYCHRHMV---VHRDLKPENVLLDAHMNAKIAD 159
Query: 905 FGLAKLFXXXXXXXXXXXXXXXYGYIAPEY-GYSLKITEKSDVYSYGVVLLEVLTGKEPT 963
FGL+ + Y APE L + D++S GV+L +L G P
Sbjct: 160 FGLSNMMSDGEFLRXSCGSP---NYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
Query: 964 DS 965
D
Sbjct: 217 DD 218
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 766 VGKGVSGIVYR------VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+G+G G+VY ++ + +AVK + ++ L ER +F E + ++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 83
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLD---------WDSRYKIILGVAHG 870
VRLLG + G+ L++ + +++G L L + + ++ +A G
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+AYL+ +HR++ + N +V F + DFG+ + ++
Sbjct: 144 MAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKE 961
APE T SD++S+GVVL E+ + E
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITSLAE 231
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 9/172 (5%)
Query: 803 QFSAEVQTLGSIRHKNIVRLLGCCNN----GRTRLLLFDYISNGSLAGLLHEKKVFLDWD 858
+F E Q ++ H IV + G ++ +Y+ +L ++H +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-K 116
Query: 859 SRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX 918
++I L + H + IIHRD+K NI++ + DFG+A+
Sbjct: 117 RAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 919 XXXXXXXXYG-YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPD 969
Y++PE + +SDVYS G VL EVLTG+ P PD
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPD 225
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 765 IVGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGELPERDQFS--AEVQTLGSIRHKNIVR 821
++GKG G V + + ++Q AVK + +D + EV+ L + H NI++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK---VINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 822 LLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPP 881
L + + ++ + + G L + ++K F + D+ +II V G+ Y+H
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-RIIKQVFSGITYMHK---HN 141
Query: 882 IIHRDIKSNNILVGPQ---FEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
I+HRD+K NIL+ + + + DFGL+ F YIAPE L
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY---YIAPEV---L 195
Query: 939 KIT--EKSDVYSYGVVLLEVLTGKEP 962
+ T EK DV+S GV+L +L+G P
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQF-SAEVQTLGSIRHKNIVRLLG 824
VGKG G V+R V AVK E+ F E+ +RH+NI+ +
Sbjct: 16 VGKGRYGEVWRGSWQGENV-AVKIF-----SSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 825 CCNNGR---TRLLLF-DYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV- 879
R T+L L Y GSL L + LD S +I+L +A GLA+LH +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 880 ----PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX--XXXXYGYIAPE 933
P I HRD+KS NILV + +AD GLA + Y+APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 934 Y-GYSLKIT-----EKSDVYSYGVVLLEV 956
++++ ++ D++++G+VL EV
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 800 ERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDS 859
E ++F E + I+H N+V+LLG C ++ +Y+ G+L L E + +
Sbjct: 71 EVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRE----CNREE 126
Query: 860 RYKIIL-----GVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXX 914
++L ++ + YL IHRD+ + N LVG +ADFGL++L
Sbjct: 127 VTAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGD 183
Query: 915 XXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+ APE + KSDV+++GV+L E+ T G P
Sbjct: 184 TYTAHAGAKFPI-KWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQF-SAEVQTLGSIRHKNIVRLLG 824
VGKG G V+R V AVK E+ F E+ +RH+NI+ +
Sbjct: 16 VGKGRYGEVWRGSWQGENV-AVKIF-----SSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 825 CCNNGR---TRLLLF-DYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV- 879
R T+L L Y GSL L + LD S +I+L +A GLA+LH +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 880 ----PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX--XXXXYGYIAPE 933
P I HRD+KS NILV + +AD GLA + Y+APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 934 Y-GYSLKIT-----EKSDVYSYGVVLLEV 956
++++ ++ D++++G+VL EV
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 18/222 (8%)
Query: 754 DDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGS 813
DD ++S+ +G G G+V++V ++ +KL ++ + R+Q E+Q L
Sbjct: 5 DDDFEKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHE 60
Query: 814 IRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAY 873
IV G + + +++ GSL +L +K + K+ + V GL Y
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSIAVIKGLTY 119
Query: 874 LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE 933
L I+HRD+K +NILV + E L DFG++ Y++PE
Sbjct: 120 LREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR----SYMSPE 173
Query: 934 YGYSLKITEKSDVYSYGVVLLEVLTGKEP-------TDSRIP 968
+ +SD++S G+ L+E+ G+ P DSR P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPP 215
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G +GIV E + + +AVKK+ K R+ EV + H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ---QRRELLFNEVVIMRDYHHDNVVDMYS 109
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G ++ +++ G+L ++ + ++ + + L V L+YLH+ V IH
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYLHNQGV---IH 164
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIKS++IL+ L+DFG ++APE L +
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPY--WMAPEVISRLPYGTEV 222
Query: 945 DVYSYGVVLLEVLTGKEP 962
D++S G++++E++ G+ P
Sbjct: 223 DIWSLGIMVIEMIDGEPP 240
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 10/204 (4%)
Query: 766 VGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G V++ ++ ++QV+A+K + + + E Q E+ L + + G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSSYVTKYYG 88
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G ++ +Y+ GS LL D ++ + GL YLH + IH
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAGP--FDEFQIATMLKEILKGLDYLHSE---KKIH 143
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK+ N+L+ Q + LADFG+A ++APE K+
Sbjct: 144 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF--WMAPEVIQQSAYDSKA 201
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIP 968
D++S G+ +E+ G+ P P
Sbjct: 202 DIWSLGITAIELAKGEPPNSDMHP 225
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 72 DVIHTENKLYLVFEFLHQ--------DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 124 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 178
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 116/276 (42%), Gaps = 37/276 (13%)
Query: 783 QVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSI-RHKNIVRLLGCCNN-GRTRLLLFDYI 839
+ +AVK L K G E +E++ L I H N+V LLG C G +++ ++
Sbjct: 58 RTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC 114
Query: 840 SNGSLAGLLHEKK-VFLDW----DSRYKIILGVAHGLAY-------LHHDCVPPIIHRDI 887
G+L+ L K+ F+ + + YK L + H + Y + IHRD+
Sbjct: 115 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 174
Query: 888 KSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVY 947
+ NIL+ + + DFGLA+ ++APE + T +SDV+
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 948 SYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQE 1006
S+GV+L E+ + G P D G R R ++TT E
Sbjct: 235 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTT--------------PE 279
Query: 1007 MLQVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
M Q + L C + P +RPT ++ L + N
Sbjct: 280 MYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQAN 312
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 116/276 (42%), Gaps = 37/276 (13%)
Query: 783 QVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSI-RHKNIVRLLGCCNN-GRTRLLLFDYI 839
+ +AVK L K G E +E++ L I H N+V LLG C G +++ ++
Sbjct: 49 RTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC 105
Query: 840 SNGSLAGLLHEKK-VFLDW----DSRYKIILGVAHGLAY-------LHHDCVPPIIHRDI 887
G+L+ L K+ F+ + + YK L + H + Y + IHRD+
Sbjct: 106 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 165
Query: 888 KSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVY 947
+ NIL+ + + DFGLA+ ++APE + T +SDV+
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 225
Query: 948 SYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQE 1006
S+GV+L E+ + G P D G R R ++TT E
Sbjct: 226 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTT--------------PE 270
Query: 1007 MLQVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
M Q + L C + P +RPT ++ L + N
Sbjct: 271 MYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQAN 303
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 68 DVIHTENKLYLVFEHVHQ--------DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 120 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR--APEIL 174
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 72/276 (26%), Positives = 115/276 (41%), Gaps = 37/276 (13%)
Query: 783 QVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSI-RHKNIVRLLGCCNN-GRTRLLLFDYI 839
+ +AVK L K G E +E++ L I H N+V LLG C G +++ ++
Sbjct: 58 RTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC 114
Query: 840 SNGSLAGLLHEKK-VFLDW----DSRYKIILGVAHGLAY-------LHHDCVPPIIHRDI 887
G+L+ L K+ F+ + + YK L + H + Y + IHRD+
Sbjct: 115 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 174
Query: 888 KSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVY 947
+ NIL+ + + DFGLA+ ++APE + T +SDV+
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 948 SYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQE 1006
S+GV+L E+ + G P D G R R ++TT E
Sbjct: 235 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTT--------------PE 279
Query: 1007 MLQVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
M Q + L C + P +RPT ++ L + N
Sbjct: 280 MYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQAN 312
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q++ + +V D VG G G V V+ + +A+KKL+ EL + +
Sbjct: 14 QEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR 73
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAG------LLHEKKVFLDWDS 859
E++ L +RH+N++ LL T D+ G + HEK L D
Sbjct: 74 -ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK---LGEDR 129
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
++ + GL Y+H IIHRD+K N+ V E + DFGLA+
Sbjct: 130 IQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSE 181
Query: 920 XXXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + ++ T+ D++S G ++ E++TGK
Sbjct: 182 MXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 71/276 (25%), Positives = 114/276 (41%), Gaps = 37/276 (13%)
Query: 783 QVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSI-RHKNIVRLLGCCNN-GRTRLLLFDYI 839
+ +AVK L K G E +E++ L I H N+V LLG C G +++ ++
Sbjct: 95 RTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC 151
Query: 840 SNGSLAGLLHEKK-VFLDW----DSRYKIILGVAHGLAY-------LHHDCVPPIIHRDI 887
G+L+ L K+ F+ + + YK L + H + Y + IHRD+
Sbjct: 152 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 211
Query: 888 KSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVY 947
+ NIL+ + + DFGLA+ ++APE + T +SDV+
Sbjct: 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 271
Query: 948 SYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQE 1006
S+GV+L E+ + G P D G R R ++TT E
Sbjct: 272 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTT--------------PE 316
Query: 1007 MLQVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
M Q + L C + P +RPT ++ L + N
Sbjct: 317 MYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQAN 349
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 71/276 (25%), Positives = 114/276 (41%), Gaps = 37/276 (13%)
Query: 783 QVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSI-RHKNIVRLLGCCNN-GRTRLLLFDYI 839
+ +AVK L K G E +E++ L I H N+V LLG C G +++ ++
Sbjct: 60 RTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC 116
Query: 840 SNGSLAGLLHEKK-VFLDW----DSRYKIILGVAHGLAY-------LHHDCVPPIIHRDI 887
G+L+ L K+ F+ + + YK L + H + Y + IHRD+
Sbjct: 117 KFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 176
Query: 888 KSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVY 947
+ NIL+ + + DFGLA+ ++APE + T +SDV+
Sbjct: 177 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 236
Query: 948 SYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQE 1006
S+GV+L E+ + G P D G R R ++TT E
Sbjct: 237 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTT--------------PE 281
Query: 1007 MLQVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
M Q + L C + P +RPT ++ L + N
Sbjct: 282 MYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQAN 314
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 71/276 (25%), Positives = 114/276 (41%), Gaps = 37/276 (13%)
Query: 783 QVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSI-RHKNIVRLLGCCNN-GRTRLLLFDYI 839
+ +AVK L K G E +E++ L I H N+V LLG C G +++ ++
Sbjct: 58 RTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC 114
Query: 840 SNGSLAGLLHEKK-VFLDW----DSRYKIILGVAHGLAY-------LHHDCVPPIIHRDI 887
G+L+ L K+ F+ + + YK L + H + Y + IHRD+
Sbjct: 115 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 174
Query: 888 KSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVY 947
+ NIL+ + + DFGLA+ ++APE + T +SDV+
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 948 SYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQE 1006
S+GV+L E+ + G P D G R R ++TT E
Sbjct: 235 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTT--------------PE 279
Query: 1007 MLQVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
M Q + L C + P +RPT ++ L + N
Sbjct: 280 MYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQAN 312
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++S + K F+D + I + + GLA+ H
Sbjct: 72 DVIHTENKLYLVFEFLSM--------DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 124 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 178
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++S + K F+D + I + + GLA+ H
Sbjct: 72 DVIHTENKLYLVFEFLSM--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 124 SHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 178
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
EV L + H NI++L + R L+ + G L + + F + D+ II
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV-IIKQ 144
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFL---ADFGLAKLFXXXXXXXXXXXX 923
V G+ YLH I+HRD+K N+L+ + + L DFGL+ +F
Sbjct: 145 VLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGT 201
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP----TDSRI 967
YIAPE K EK DV+S GV+L +L G P TD I
Sbjct: 202 AY---YIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI 245
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 754 DDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGS 813
DD ++S+ +G G G+V++V ++ +KL ++ + R+Q E+Q L
Sbjct: 5 DDDFEKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHE 60
Query: 814 IRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAY 873
IV G + + +++ GSL +L +K + K+ + V GL Y
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSIAVIKGLTY 119
Query: 874 LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE 933
L I+HRD+K +NILV + E L DFG++ Y++PE
Sbjct: 120 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR----SYMSPE 173
Query: 934 YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+ +SD++S G+ L+E+ G+ P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++S + K F+D + I + + GLA+ H
Sbjct: 70 DVIHTENKLYLVFEFLSM--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 122 SHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 176
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 754 DDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGS 813
DD ++S+ +G G G+V++V ++ +KL ++ + R+Q E+Q L
Sbjct: 5 DDDFEKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHE 60
Query: 814 IRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAY 873
IV G + + +++ GSL +L +K + K+ + V GL Y
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSIAVIKGLTY 119
Query: 874 LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE 933
L I+HRD+K +NILV + E L DFG++ Y++PE
Sbjct: 120 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR----SYMSPE 173
Query: 934 YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+ +SD++S G+ L+E+ G+ P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 754 DDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGS 813
DD ++S+ +G G G+V++V ++ +KL ++ + R+Q E+Q L
Sbjct: 8 DDDFEKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHE 63
Query: 814 IRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAY 873
IV G + + +++ GSL +L +K + K+ + V GL Y
Sbjct: 64 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSIAVIKGLTY 122
Query: 874 LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE 933
L I+HRD+K +NILV + E L DFG++ Y++PE
Sbjct: 123 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTR----SYMSPE 176
Query: 934 YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+ +SD++S G+ L+E+ G+ P
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 70
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++S + K F+D + I + + GLA+ H
Sbjct: 71 DVIHTENKLYLVFEFLSM--------DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 123 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 177
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 116/276 (42%), Gaps = 37/276 (13%)
Query: 783 QVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSI-RHKNIVRLLGCCNN-GRTRLLLFDYI 839
+ +AVK L K G E +E++ L I H N+V LLG C G +++ ++
Sbjct: 49 RTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFC 105
Query: 840 SNGSLAGLLHEKK-VFLDW----DSRYKIILGVAHGLAY-------LHHDCVPPIIHRDI 887
G+L+ L K+ F+ + + YK L + H + Y + IHRD+
Sbjct: 106 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 165
Query: 888 KSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVY 947
+ NIL+ + + DFGLA+ ++APE + T +SDV+
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 225
Query: 948 SYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQE 1006
S+GV+L E+ + G P D G R R ++TT E
Sbjct: 226 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTT--------------PE 270
Query: 1007 MLQVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
M Q + L C + P +RPT ++ L + N
Sbjct: 271 MYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQAN 303
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 75
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 76 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 128 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR--APEIL 182
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 217
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 766 VGKGVSGIV--YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G +GIV R + RQV AVK + K R+ EV + +H N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQV-AVKMMDLRKQ---QRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPII 883
G +L +++ G+L ++ +V L+ + + V LAYLH V I
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLHAQGV---I 163
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY-GYSLKITE 942
HRDIKS++IL+ L+DFG ++APE SL TE
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPY--WMAPEVISRSLYATE 221
Query: 943 KSDVYSYGVVLLEVLTGKEPTDSRIP 968
D++S G++++E++ G+ P S P
Sbjct: 222 -VDIWSLGIMVIEMVDGEPPYFSDSP 246
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 764 NIVGKGV-SGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRL 822
+++G G S ++ + +++++A+K + K + E+ L I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCI--AKKALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G L+ +S G L + EK + + D+ ++I V + YLH I
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDAVKYLHD---LGI 137
Query: 883 IHRDIKSNNIL---VGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
+HRD+K N+L + + ++DFGL+K+ GY+APE
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
++ D +S GV+ +L G P
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 22/170 (12%)
Query: 755 DVVTRLSDTNIVGKGVSGIVYRVE-IPSRQVIAVKKLWPVKNGELPERDQFS----AEVQ 809
D V++ +G+G G V++ + Q +A+KK+ ++N E++ F E++
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-MEN----EKEGFPITALREIK 69
Query: 810 TLGSIRHKNIVRLLGCCNN-----GRTR---LLLFDYISNGSLAGLLHEKKVFLDWDSRY 861
L ++H+N+V L+ C R + L+FD+ + LAGLL V
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIK 128
Query: 862 KIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLF 911
+++ + +GL Y+H + I+HRD+K+ N+L+ LADFGLA+ F
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 764 NIVGKGV-SGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRL 822
+++G G S ++ + +++++A+K + K + E+ L I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCI--AKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G L+ +S G L + EK + + D+ ++I V + YLH I
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDAVKYLHD---LGI 137
Query: 883 IHRDIKSNNIL---VGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
+HRD+K N+L + + ++DFGL+K+ GY+APE
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
++ D +S GV+ +L G P
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 764 NIVGKGV-SGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRL 822
+++G G S ++ + +++++A+K + K + E+ L I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCI--AKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G L+ +S G L + EK + + D+ ++I V + YLH I
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDAVKYLHD---LGI 137
Query: 883 IHRDIKSNNIL---VGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
+HRD+K N+L + + ++DFGL+K+ GY+APE
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
++ D +S GV+ +L G P
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 764 NIVGKGV-SGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRL 822
+++G G S ++ + +++++A+K + K + E+ L I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCI--AKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+G L+ +S G L + EK + + D+ ++I V + YLH I
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDAVKYLHD---LGI 137
Query: 883 IHRDIKSNNIL---VGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
+HRD+K N+L + + ++DFGL+K+ GY+APE
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
++ D +S GV+ +L G P
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 31 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 90
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 91 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 147
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 148 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 199
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 200 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 71/276 (25%), Positives = 114/276 (41%), Gaps = 37/276 (13%)
Query: 783 QVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSI-RHKNIVRLLGCCNN-GRTRLLLFDYI 839
+ +AVK L K G E +E++ L I H N+V LLG C G +++ ++
Sbjct: 49 RTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFC 105
Query: 840 SNGSLAGLLHEKK-VFLDW----DSRYKIILGVAHGLAY-------LHHDCVPPIIHRDI 887
G+L+ L K+ F+ + + YK L + H + Y + IHRD+
Sbjct: 106 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 165
Query: 888 KSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVY 947
+ NIL+ + + DFGLA+ ++APE + T +SDV+
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 225
Query: 948 SYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQE 1006
S+GV+L E+ + G P D G R R ++TT E
Sbjct: 226 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTT--------------PE 270
Query: 1007 MLQVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
M Q + L C + P +RPT ++ L + N
Sbjct: 271 MYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQAN 303
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 71/276 (25%), Positives = 114/276 (41%), Gaps = 37/276 (13%)
Query: 783 QVIAVKKLWPVKNGEL-PERDQFSAEVQTLGSI-RHKNIVRLLGCCNN-GRTRLLLFDYI 839
+ +AVK L K G E +E++ L I H N+V LLG C G +++ ++
Sbjct: 49 RTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFC 105
Query: 840 SNGSLAGLLHEKK-VFLDW----DSRYKIILGVAHGLAY-------LHHDCVPPIIHRDI 887
G+L+ L K+ F+ + + YK L + H + Y + IHRD+
Sbjct: 106 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 165
Query: 888 KSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVY 947
+ NIL+ + + DFGLA+ ++APE + T +SDV+
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 225
Query: 948 SYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQE 1006
S+GV+L E+ + G P D G R R ++TT E
Sbjct: 226 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTT--------------PE 270
Query: 1007 MLQVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
M Q + L C + P +RPT ++ L + N
Sbjct: 271 MYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQAN 303
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 754 DDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGS 813
DD ++S+ +G G G+V++V ++ +KL ++ + R+Q E+Q L
Sbjct: 5 DDDFEKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHE 60
Query: 814 IRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAY 873
IV G + + +++ GSL +L +K + K+ + V GL Y
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSIAVIKGLTY 119
Query: 874 LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE 933
L I+HRD+K +NILV + E L DFG++ Y++PE
Sbjct: 120 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR----SYMSPE 173
Query: 934 YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+ +SD++S G+ L+E+ G+ P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 754 DDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGS 813
DD ++S+ +G G G+V++V ++ +KL ++ + R+Q E+Q L
Sbjct: 5 DDDFEKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHE 60
Query: 814 IRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAY 873
IV G + + +++ GSL +L +K + K+ + V GL Y
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSIAVIKGLTY 119
Query: 874 LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE 933
L I+HRD+K +NILV + E L DFG++ Y++PE
Sbjct: 120 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR----SYMSPE 173
Query: 934 YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+ +SD++S G+ L+E+ G+ P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 70 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 122 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR--APEIL 176
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 31 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 90
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 91 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 147
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 148 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 199
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 200 XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 75
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 76 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 128 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR--APEIL 182
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 217
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 30 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 89
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 90 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 146
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 147 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 198
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 199 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 17 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 76
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 77 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 133
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 134 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 185
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 72 DVIHTENKLYLVFEHVDQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 124 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 178
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 72 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 124 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 178
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 70
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 71 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 123 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 177
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 72 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 124 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 178
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 7 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 66
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 67 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 123
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 124 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 175
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR--APEIL 175
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 7 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 66
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 67 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 123
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 124 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 175
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 176 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 68 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 120 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR--APEIL 174
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR--APEIL 175
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 72
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 73 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 125 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 179
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 214
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR--APEIL 175
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 68 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 120 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR--APEIL 174
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 766 VGKGVSGIVYRVEIPSR-QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G +GIV + S +++AVKK+ K R+ EV + +H+N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYN 88
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G ++ +++ G+L ++ + ++ + + L V L+ LH V IH
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGV---IH 143
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIKS++IL+ L+DFG ++APE L +
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY--WMAPELISRLPYGPEV 201
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIP 968
D++S G++++E++ G+ P + P
Sbjct: 202 DIWSLGIMVIEMVDGEPPYFNEPP 225
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 766 VGKGVSGIVYRVEIPSR-QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G +GIV + S +++AVKK+ K R+ EV + +H+N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYN 84
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G ++ +++ G+L ++ + ++ + + L V L+ LH V IH
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGV---IH 139
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIKS++IL+ L+DFG ++APE L +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY--WMAPELISRLPYGPEV 197
Query: 945 DVYSYGVVLLEVLTGKEP 962
D++S G++++E++ G+ P
Sbjct: 198 DIWSLGIMVIEMVDGEPP 215
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 175
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS--TAIREISLLKELNHPNIVKLL 72
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 73 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 125 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR--APEIL 179
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 214
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 175
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 68 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 120 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 174
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 803 QFSAEVQTLGSIRHKNIVRLLGCCNN----GRTRLLLFDYISNGSLAGLLHEKKVFLDWD 858
+F E Q ++ H IV + G ++ +Y+ +L ++H +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-K 116
Query: 859 SRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX 918
++I L + H + IIHRD+K NIL+ + DFG+A+
Sbjct: 117 RAIEVIADACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSV 173
Query: 919 XXXXXXXXYG-YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y++PE + +SDVYS G VL EVLTG+ P
Sbjct: 174 XQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 70 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 122 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 176
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 175
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
E+ L S+ H NI++L + + L+ ++ G L + + F + D+ I+
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA-NIMKQ 154
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQ---FEAFLADFGLAKLFXXXXXXXXXXXX 923
+ G+ YLH I+HRDIK NIL+ + + DFGL+ F
Sbjct: 155 ILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGT 211
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
YIAPE K EK DV+S GV++ +L G P
Sbjct: 212 AY---YIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 766 VGKGVSGIVYRVEIPSR-QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G +GIV + S +++AVKK+ K R+ EV + +H+N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYN 93
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G ++ +++ G+L ++ + ++ + + L V L+ LH V IH
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGV---IH 148
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIKS++IL+ L+DFG ++APE L +
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY--WMAPELISRLPYGPEV 206
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIP 968
D++S G++++E++ G+ P + P
Sbjct: 207 DIWSLGIMVIEMVDGEPPYFNEPP 230
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 70
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 71 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 123 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 177
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 766 VGKGVSGIVYRVEIPSR-QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G +GIV + S +++AVKK+ K R+ EV + +H+N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYN 95
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G ++ +++ G+L ++ + ++ + + L V L+ LH V IH
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGV---IH 150
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIKS++IL+ L+DFG ++APE L +
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY--WMAPELISRLPYGPEV 208
Query: 945 DVYSYGVVLLEVLTGKEPTDSRIP 968
D++S G++++E++ G+ P + P
Sbjct: 209 DIWSLGIMVIEMVDGEPPYFNEPP 232
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 68 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 120 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 174
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 175
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 70 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 122 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 176
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGY-SLKITEKSDVYSYGVVLLEVLTGK 960
Y APE ++ + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 9/165 (5%)
Query: 803 QFSAEVQTLGSIRHKNIVRLLGCCNN----GRTRLLLFDYISNGSLAGLLHEKKVFLDWD 858
+F E Q ++ H IV + G ++ +Y+ +L ++H +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-K 116
Query: 859 SRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX 918
++I L + H + IIHRD+K NI++ + DFG+A+
Sbjct: 117 RAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 919 XXXXXXXXYG-YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y++PE + +SDVYS G VL EVLTG+ P
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 759 RLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHK 817
R ++GKG G ++ + + Q AVK + + + +++ EVQ L + H
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 818 NIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHD 877
NI +L + L+ + + G L + +K F + D+ +II V G+ Y H +
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGITYXHKN 145
Query: 878 CVPPIIHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY 934
I+HRD+K N+L+ + + + DFGL+ F YIAPE
Sbjct: 146 ---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAY---YIAPEV 199
Query: 935 GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+ EK DV+S GV+L +L+G P
Sbjct: 200 LHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 70
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 71 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 123 SHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 177
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 70 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 122 SHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 176
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 22/170 (12%)
Query: 755 DVVTRLSDTNIVGKGVSGIVYRVE-IPSRQVIAVKKLWPVKNGELPERDQFS----AEVQ 809
D V++ +G+G G V++ + Q +A+KK+ ++N E++ F E++
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-MEN----EKEGFPITALREIK 68
Query: 810 TLGSIRHKNIVRLLGCCNN-----GRTR---LLLFDYISNGSLAGLLHEKKVFLDWDSRY 861
L ++H+N+V L+ C R + L+FD+ + LAGLL V
Sbjct: 69 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIK 127
Query: 862 KIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLF 911
+++ + +GL Y+H + I+HRD+K+ N+L+ LADFGLA+ F
Sbjct: 128 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 174
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 23 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR 82
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 83 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 139
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 140 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 191
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 22/170 (12%)
Query: 755 DVVTRLSDTNIVGKGVSGIVYRVE-IPSRQVIAVKKLWPVKNGELPERDQFS----AEVQ 809
D V++ +G+G G V++ + Q +A+KK+ ++N E++ F E++
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-MEN----EKEGFPITALREIK 69
Query: 810 TLGSIRHKNIVRLLGCCNN-----GRTR---LLLFDYISNGSLAGLLHEKKVFLDWDSRY 861
L ++H+N+V L+ C R + L+FD+ + LAGLL V
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIK 128
Query: 862 KIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLF 911
+++ + +GL Y+H + I+HRD+K+ N+L+ LADFGLA+ F
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + VG G G + + + +AVKKL + + +
Sbjct: 21 QELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 80
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 81 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 137
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 138 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 189
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 190 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 766 VGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G + IVYR + Q A+K L + ++ E+ L + H NI++L
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVL-----KKTVDKKIVRTEIGVLLRLSHPNIIKLKE 115
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
L+ + ++ G L + EK + + D+ + + +AYLH + I+H
Sbjct: 116 IFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA-DAVKQILEAVAYLHEN---GIVH 171
Query: 885 RDIKSNNILVG---PQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
RD+K N+L P +ADFGL+K+ GY APE
Sbjct: 172 RDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTP---GYCAPEILRGCAYG 228
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
+ D++S G++ +L G EP
Sbjct: 229 PEVDMWSVGIITYILLCGFEP 249
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 22/170 (12%)
Query: 755 DVVTRLSDTNIVGKGVSGIVYRVE-IPSRQVIAVKKLWPVKNGELPERDQFS----AEVQ 809
D V++ +G+G G V++ + Q +A+KK+ ++N E++ F E++
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-MEN----EKEGFPITALREIK 69
Query: 810 TLGSIRHKNIVRLLGCCNN-----GRTR---LLLFDYISNGSLAGLLHEKKVFLDWDSRY 861
L ++H+N+V L+ C R + L+FD+ + LAGLL V
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIK 128
Query: 862 KIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLF 911
+++ + +GL Y+H + I+HRD+K+ N+L+ LADFGLA+ F
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 766 VGKGVSGIVYRVEIPSR-QVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G +GIV + S +++AVKK+ K R+ EV + +H+N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYN 138
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
G ++ +++ G+L ++ + ++ + + L V L+ LH V IH
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGV---IH 193
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIKS++IL+ L+DFG ++APE L +
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY--WMAPELISRLPYGPEV 251
Query: 945 DVYSYGVVLLEVLTGKEP 962
D++S G++++E++ G+ P
Sbjct: 252 DIWSLGIMVIEMVDGEPP 269
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 9/165 (5%)
Query: 803 QFSAEVQTLGSIRHKNIVRLLGCCNN----GRTRLLLFDYISNGSLAGLLHEKKVFLDWD 858
+F E Q ++ H IV + G ++ +Y+ +L ++H +
Sbjct: 75 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-K 133
Query: 859 SRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX 918
++I L + H + IIHRD+K NI++ + DFG+A+
Sbjct: 134 RAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 190
Query: 919 XXXXXXXXYG-YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y++PE + +SDVYS G VL EVLTG+ P
Sbjct: 191 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 78 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 134
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 135 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEM 186
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 13/201 (6%)
Query: 766 VGKGVSGIVYRVE-IPSRQVIAVKKLWPVKNGELPERDQFSA--EVQTLGSIRHKNIVRL 822
+G+G G V++ + + +++A+K+ V+ + E SA E+ L ++HKNIVRL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKR---VRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
++ + L+F++ + L LD + + + GL + H V
Sbjct: 67 HDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV--- 122
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITE 942
+HRD+K N+L+ E LADFGLA+ F Y P+ + K+
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYR--PPDVLFGAKLYS 180
Query: 943 KS-DVYSYGVVLLEVLTGKEP 962
S D++S G + E+ P
Sbjct: 181 TSIDMWSAGCIFAELANAARP 201
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 9/198 (4%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G ++ S I V K + E+ +EV L ++H NIVR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 826 C--NNGRTRLLLFDYISNGSLAGLLHE---KKVFLDWDSRYKIILGVAHGLAYLHH--DC 878
T ++ +Y G LA ++ + ++ +LD + +++ + L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 879 VPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
++HRD+K N+ + + L DFGLA++ Y++PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPY--YMSPEQMNRM 191
Query: 939 KITEKSDVYSYGVVLLEV 956
EKSD++S G +L E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 9/198 (4%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G ++ S I V K + E+ +EV L ++H NIVR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 826 C--NNGRTRLLLFDYISNGSLAGLLHE---KKVFLDWDSRYKIILGVAHGLAYLHH--DC 878
T ++ +Y G LA ++ + ++ +LD + +++ + L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 879 VPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
++HRD+K N+ + + L DFGLA++ Y++PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPY--YMSPEQMNRM 191
Query: 939 KITEKSDVYSYGVVLLEV 956
EKSD++S G +L E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 10/211 (4%)
Query: 755 DVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGS 813
DV R + +G+G G+V R+ +A+KK+ P ++ +R E+Q L
Sbjct: 40 DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRT--LREIQILLR 97
Query: 814 IRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVAHGL 871
RH+N++ + + YI + L++ K L D + + GL
Sbjct: 98 FRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGL 157
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXYGYI 930
Y+H V +HRD+K +N+L+ + + DFGLA++ Y
Sbjct: 158 KYIHSANV---LHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 931 APEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
APE + K KS D++S G +L E+L+ +
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ--------DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 121 SHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR--APEIL 175
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 34 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 93
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 94 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 150
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 151 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 202
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 203 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 31 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 90
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 91 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 147
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 148 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 199
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 200 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 16 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 76 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 132
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 133 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEM 184
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVK---KLWPVKNGELPERDQFSAEVQTLGSIRHKNIVR 821
I+G+G G V + ++K K + N E ++F +E + H N++R
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 822 LLGCCNNGRTR-----LLLFDYISNGSLAGLLHEKKV-----FLDWDSRYKIILGVAHGL 871
LLG C ++ +++ ++ G L L ++ + + K ++ +A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIA 931
YL + +HRD+ + N ++ +ADFGL+K +IA
Sbjct: 161 EYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 932 PEYGYSLKITEKSDVYSYGVVLLEVLT 958
E T KSDV+++GV + E+ T
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 78 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 134
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 135 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEM 186
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 17 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 76
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 77 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 133
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 134 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 185
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 15/203 (7%)
Query: 766 VGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERD--QFSAEVQTLGSIRHKNIVRL 822
+GKG +V R ++IP+ Q A K + +L RD + E + ++H NIVRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKI---INTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+ L+FD ++ G L + ++ + + D+ + I L ++H + I
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI----QQILESVNHCHLNGI 124
Query: 883 IHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
+HRD+K N+L+ + + LADFGLA GY++PE
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
+ D+++ GV+L +L G P
Sbjct: 183 YGKPVDMWACGVILYILLVGYPP 205
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 78 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 134
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 135 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEM 186
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 30 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 89
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 90 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 146
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 147 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 198
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 199 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 73 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 129
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 130 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 181
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 23 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 82
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 83 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 139
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 140 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 191
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 23 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 82
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 83 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 139
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 140 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 191
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 9/165 (5%)
Query: 803 QFSAEVQTLGSIRHKNIVRLLGCCNN----GRTRLLLFDYISNGSLAGLLHEKKVFLDWD 858
+F E Q ++ H IV + G ++ +Y+ +L ++H +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-K 116
Query: 859 SRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX 918
++I L + H + IIHRD+K NI++ + DFG+A+
Sbjct: 117 RAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 919 XXXXXXXXYG-YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y++PE + +SDVYS G VL EVLTG+ P
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 73 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 129
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 130 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 181
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 16 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 76 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 132
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 133 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 184
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 10 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 69
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 70 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 126
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 127 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 178
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 179 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 22 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 81
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 82 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 138
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 139 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEM 190
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 78 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 134
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 135 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 186
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 73 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 129
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 130 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 181
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 30/227 (13%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 34 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 93
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 94 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 150
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 151 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----------- 196
Query: 921 XXXXXXYGYIAPEYGYSLKIT-------EKSDVYSYGVVLLEVLTGK 960
GY+A + + +I + D++S G ++ E+LTG+
Sbjct: 197 HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 9 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 68
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 69 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 125
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 126 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 177
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 178 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 9/165 (5%)
Query: 803 QFSAEVQTLGSIRHKNIVRLLGCCNN----GRTRLLLFDYISNGSLAGLLHEKKVFLDWD 858
+F E Q ++ H IV + G ++ +Y+ +L ++H +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-K 116
Query: 859 SRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX 918
++I L + H + IIHRD+K NI++ + DFG+A+
Sbjct: 117 RAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 919 XXXXXXXXYG-YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y++PE + +SDVYS G VL EVLTG+ P
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 44 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 100
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L C + Y NG L + + F + +R+ + L YLH
Sbjct: 101 KLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 156
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 217 CKSSDLWALGCIIYQLVAGLPP 238
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 764 NIVGKGVSGIVY-RVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRL 822
N +G+G G V V+ +R A KK + + + D+F E++ + S+ H NI+RL
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKK---IPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 71
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+ L+ + + G L + K+VF + D+ +I+ V +AY H V
Sbjct: 72 YETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-RIMKDVLSAVAYCHKLNV--- 127
Query: 883 IHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
HRD+K N L P L DFGLA F Y++P+ L
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPY---YVSPQVLEGLY 184
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
E D +S GV++ +L G P
Sbjct: 185 GPE-CDEWSAGVMMYVLLCGYPP 206
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 8 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 67
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 68 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 124
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 125 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 176
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 177 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 22 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 81
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 82 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 138
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 139 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 190
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 17 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 76
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 77 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 133
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 134 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 185
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 16 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 76 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 132
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 133 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 184
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 7 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 66
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 67 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 123
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 124 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 175
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 17 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 76
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 77 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 133
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 134 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEM 185
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 766 VGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G VY+ ++ +++V+A+K + + + E Q E+ L I R G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYITRYFG 84
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
++ +Y+ GS LL K L+ I+ + GL YLH + IH
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLHSERK---IH 139
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK+ N+L+ Q + LADFG+A ++APE K+
Sbjct: 140 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF--WMAPEVIKQSAYDFKA 197
Query: 945 DVYSYGVVLLEVLTGKEP 962
D++S G+ +E+ G+ P
Sbjct: 198 DIWSLGITAIELAKGEPP 215
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 764 NIVGKGVSGIVY-RVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRL 822
N +G+G G V V+ +R A KK + + + D+F E++ + S+ H NI+RL
Sbjct: 32 NTIGRGSWGEVKIAVQKGTRIRRAAKK---IPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 88
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+ L+ + + G L + K+VF + D+ +I+ V +AY H V
Sbjct: 89 YETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-RIMKDVLSAVAYCHKLNV--- 144
Query: 883 IHRDIKSNNILV---GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
HRD+K N L P L DFGLA F Y++P+ L
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPY---YVSPQVLEGLY 201
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
E D +S GV++ +L G P
Sbjct: 202 GPE-CDEWSAGVMMYVLLCGYPP 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 8 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 67
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 68 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 124
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 125 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 176
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 177 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 13/218 (5%)
Query: 746 FQKLNFSVDDVVTRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQF 804
Q L +++ T+L +GKG G V++ ++ +++V+A+K + + + E Q
Sbjct: 13 MQNLKADPEELFTKLEK---IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ- 68
Query: 805 SAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII 864
E+ L + + G ++ +Y+ GS LL LD I+
Sbjct: 69 -QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATIL 125
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ GL YLH + IHRDIK+ N+L+ E LADFG+A
Sbjct: 126 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGT 182
Query: 925 XXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
++APE K+D++S G+ +E+ G+ P
Sbjct: 183 PF--WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/207 (28%), Positives = 88/207 (42%), Gaps = 19/207 (9%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-----LP-ERDQFSAEVQTLGSIRHKN 818
+G G G VY+ P S +A+K + V NG LP + A ++ L + H N
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 819 IVRLLGCCNNGRTR-----LLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAY 873
+VRL+ C RT L+F+++ L L ++ ++ GL +
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135
Query: 874 LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE 933
LH +C I+HRD+K NILV LADFGLA+++ Y APE
Sbjct: 136 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLW---YRAPE 189
Query: 934 YGYSLKITEKSDVYSYGVVLLEVLTGK 960
D++S G + E+ K
Sbjct: 190 VLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 73 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 129
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 130 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEM 181
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+KK+ E +P E+ L + H NIV+LL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GL++ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR--APEIL 175
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 28/168 (16%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKV------------- 853
E+ + ++H+NIVRL + L+F+++ N L + + V
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVK 111
Query: 854 FLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXX 913
+ W + GLA+ H + I+HRD+K N+L+ + + L DFGLA+ F
Sbjct: 112 YFQWQ--------LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGI 160
Query: 914 XXXXXXXXXXXXXYGYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y AP+ + S D++S G +L E++TGK
Sbjct: 161 PVNTFSSEVVTLWYR--APDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 758 TRLSDTNIV----GKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERD--QFSAEVQTL 811
T+ SD V GKG +V R + + K+ + +L RD + E +
Sbjct: 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI--INTKKLSARDFQKLEREARIC 82
Query: 812 GSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGL 871
++H NIVRL L+FD ++ G L + ++ + + D+ + I + +
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-CIQQILESI 141
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXXXXXXXXXXXXYG 928
AY H + I+HR++K N+L+ + + LADFGLA G
Sbjct: 142 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPG 195
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y++PE ++ D+++ GV+L +L G P
Sbjct: 196 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + +G G G + + + +AVKKL + + +
Sbjct: 16 QELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 76 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 132
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 133 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEM 184
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 9/198 (4%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G ++ S I V K + E+ +EV L ++H NIVR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 826 C--NNGRTRLLLFDYISNGSLAGLLHE---KKVFLDWDSRYKIILGVAHGLAYLHH--DC 878
T ++ +Y G LA ++ + ++ +LD + +++ + L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 879 VPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
++HRD+K N+ + + L DFGLA++ Y++PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPY--YMSPEQMNRM 191
Query: 939 KITEKSDVYSYGVVLLEV 956
EKSD++S G +L E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 15/203 (7%)
Query: 766 VGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERD--QFSAEVQTLGSIRHKNIVRL 822
+GKG +V R ++IP+ Q A K + +L RD + E + ++H NIVRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAK---IINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+ L+FD ++ G L + ++ + + D+ + I L ++H + I
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI----QQILESVNHCHLNGI 124
Query: 883 IHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
+HRD+K N+L+ + + LADFGLA GY++PE
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
+ D+++ GV+L +L G P
Sbjct: 183 YGKPVDMWACGVILYILLVGYPP 205
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGL +
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 764 NIVGKGVSGIVYRVE-IPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRL 822
N++GKG VYR E I + +A+K + + + EV+ ++H +I+ L
Sbjct: 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEK-KVFLDWDSRYKIILGVAHGLAYLHHDCVPP 881
+ L+ + NG + L + K F + ++R+ + + G+ YLH
Sbjct: 77 YNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARH-FMHQIITGMLYLHSH---G 132
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
I+HRD+ +N+L+ +ADFGLA YI+PE
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTP--NYISPEIATRSAHG 190
Query: 942 EKSDVYSYGVVLLEVLTGKEPTDS 965
+SDV+S G + +L G+ P D+
Sbjct: 191 LESDVWSLGCMFYTLLIGRPPFDT 214
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 22/223 (9%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSGIV---YRVEIPSRQVIAVKKLWPVKNGELPERDQ 803
Q+LN +V +V RL VG G G V Y + RQ +AVKKL + R
Sbjct: 17 QELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRT 74
Query: 804 FSAEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWD 858
+ E++ L ++H+N++ LL + + L + L ++ + + D
Sbjct: 75 YR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV-KSQALSDEH 132
Query: 859 SRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX 918
++ ++ + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 133 VQF-LVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADE 183
Query: 919 XXXXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+L GK
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 10/159 (6%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
E+ L I+H+NIV L + L+ +S G L + EK + + D+ +I
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS-TLIRQ 128
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEA---FLADFGLAKLFXXXXXXXXXXXX 923
V + YLH I+HRD+K N+L Q E ++DFGL+K+
Sbjct: 129 VLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTA 182
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
GY+APE ++ D +S GV+ +L G P
Sbjct: 183 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+ K+ E +P E+ L + H NIV+LL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 121 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR--APEIL 175
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 28/215 (13%)
Query: 766 VGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGE-LPERDQFSAEVQTLGSIRHKNIVRLL 823
+G+G G+VY+ + +V+A+ K+ E +P E+ L + H NIV+LL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 824 GCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI--------ILGVAHGLAYLH 875
+ L+F+++ + K F+D + I + + GLA+ H
Sbjct: 68 DVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
V +HRD+K N+L+ + LADFGLA+ F Y APE
Sbjct: 120 SHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR--APEIL 174
Query: 936 YSLKITEKS-DVYSYGVVLLEVLTGKE--PTDSRI 967
K + D++S G + E++T + P DS I
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 10/217 (4%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFS 805
+ L F D + +GKG G V++ ++ +++V+A+K + + + E Q
Sbjct: 16 ENLYFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-- 73
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIIL 865
E+ L + + G ++ +Y+ GS LL LD I+
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILR 131
Query: 866 GVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXX 925
+ GL YLH + IHRDIK+ N+L+ E LADFG+A
Sbjct: 132 EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTP 188
Query: 926 XYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
++APE K+D++S G+ +E+ G+ P
Sbjct: 189 F--WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
E+ L I+H+NIV L + L+ +S G L + E+ V+ + D+ +I
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-VIQQ 114
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNIL-VGPQ--FEAFLADFGLAKLFXXXXXXXXXXXX 923
V + YLH + I+HRD+K N+L + P+ + + DFGL+K+
Sbjct: 115 VLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTA 167
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
GY+APE ++ D +S GV+ +L G P
Sbjct: 168 CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + D+GLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 19/226 (8%)
Query: 747 QKLNFSVDDVVTRLSDT----NIVGKGVSGIVYRV--EIPSRQVIAVKKLWPVKNGELPE 800
+ L F TR +D +GKG +V R + P+++ A K+ K +
Sbjct: 16 ENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAA--KIINTKKLSARD 73
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
+ E + ++H NIVRL + L+FD ++ G L + ++ + + D+
Sbjct: 74 HQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS 133
Query: 861 YKIILGVAHGLAYLH-HDCVPPIIHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXX 916
+ I + + ++H HD I+HRD+K N+L+ + + LADFGLA
Sbjct: 134 H-CIHQILESVNHIHQHD----IVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGE 186
Query: 917 XXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
GY++PE + D+++ GV+L +L G P
Sbjct: 187 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 758 TRLSDTNIV----GKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERD--QFSAEVQTL 811
T+ SD V GKG +V R + + K+ + +L RD + E +
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI--INTKKLSARDFQKLEREARIC 59
Query: 812 GSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGL 871
++H NIVRL L+FD ++ G L + ++ + + D+ + I + +
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-CIQQILESI 118
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXXXXXXXXXXXXYG 928
AY H + I+HR++K N+L+ + + LADFGLA G
Sbjct: 119 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPG 172
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y++PE ++ D+++ GV+L +L G P
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 758 TRLSDTNIV----GKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERD--QFSAEVQTL 811
T+ SD V GKG +V R + + K+ + +L RD + E +
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI--INTKKLSARDFQKLEREARIC 58
Query: 812 GSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGL 871
++H NIVRL L+FD ++ G L + ++ + + D+ + I + +
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-CIQQILESI 117
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXXXXXXXXXXXXYG 928
AY H + I+HR++K N+L+ + + LADFGLA G
Sbjct: 118 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPG 171
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y++PE ++ D+++ GV+L +L G P
Sbjct: 172 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 758 TRLSDTNIV----GKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERD--QFSAEVQTL 811
T+ SD V GKG +V R + + K+ + +L RD + E +
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI--INTKKLSARDFQKLEREARIC 59
Query: 812 GSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGL 871
++H NIVRL L+FD ++ G L + ++ + + D+ + I + +
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-CIQQILESI 118
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXXXXXXXXXXXXYG 928
AY H + I+HR++K N+L+ + + LADFGLA G
Sbjct: 119 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPG 172
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y++PE ++ D+++ GV+L +L G P
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 82/203 (40%), Gaps = 22/203 (10%)
Query: 797 ELPERDQFSAEVQTLGSIRHKNIVRLLGCCNNGR----TRLLLFDYISNGSLAG---LLH 849
E +R++ E H NI+RL+ C R LL + G+L L
Sbjct: 66 EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLK 125
Query: 850 EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK 909
+K FL D ++LG+ GL +H HRD+K NIL+G + + L D G
Sbjct: 126 DKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMN 182
Query: 910 LFXXXXXXXXXXXXXXXYG-------YIAPEYGYSLK----ITEKSDVYSYGVVLLEVLT 958
+ Y APE +S++ I E++DV+S G VL ++
Sbjct: 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPEL-FSVQSHCVIDERTDVWSLGCVLYAMMF 241
Query: 959 GKEPTDSRIPDGAHIITWVNGEL 981
G+ P D G + V +L
Sbjct: 242 GEGPYDMVFQKGDSVALAVQNQL 264
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 26/225 (11%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + VG G G + ++ S IAVKKL + + +
Sbjct: 40 QELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR 99
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL + + L ++ L ++ +K L D
Sbjct: 100 -ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 156
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 157 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 208
Query: 921 XXXXXXYGYIAPE-----YGYSLKITEKSDVYSYGVVLLEVLTGK 960
Y APE Y++ + D++S G ++ E+LTG+
Sbjct: 209 TGYVATRWYRAPEIMLNWMHYNMTV----DIWSVGCIMAELLTGR 249
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 87/208 (41%), Gaps = 24/208 (11%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+GKG G V+ + +V AVK + + E+ +RH+NI+ +
Sbjct: 45 IGKGRYGEVWMGKWRGEKV-AVKVFFTTEEASWFR----ETEIYQTVLMRHENILGFIAA 99
Query: 826 CNNGR---TRL-LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV-- 879
G T+L L+ DY NGSL L K LD S K+ GL +LH +
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCHLHTEIFST 157
Query: 880 ---PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX--XXXXXXYGYIAPEY 934
P I HRD+KS NILV +AD GLA F Y+ PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEV 217
Query: 935 -GYSLKITE-----KSDVYSYGVVLLEV 956
SL +D+YS+G++L EV
Sbjct: 218 LDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
EV+ + + H NIV+L +T L+ +Y S G + L + ++R K
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF-RQ 114
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+ + Y H I+HRD+K+ N+L+ +ADFG + F
Sbjct: 115 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP- 170
Query: 927 YGYIAPEYGYSLKIT-EKSDVYSYGVVLLEVLTGKEPTDSR 966
Y APE K + DV+S GV+L +++G P D +
Sbjct: 171 --YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 209
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
EV+ + + H NIV+L +T L+ +Y S G + L + ++R K
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF-RQ 122
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+ + Y H I+HRD+K+ N+L+ +ADFG + F
Sbjct: 123 IVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPP- 178
Query: 927 YGYIAPEYGYSLKIT-EKSDVYSYGVVLLEVLTGKEPTDSR 966
Y APE K + DV+S GV+L +++G P D +
Sbjct: 179 --YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
EV+ + + H NIV+L +T L+ +Y S G + L + ++R K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQ 121
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+ + Y H I+HRD+K+ N+L+ +ADFG + F
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPP- 177
Query: 927 YGYIAPEYGYSLKIT-EKSDVYSYGVVLLEVLTGKEPTDSR 966
Y APE K + DV+S GV+L +++G P D +
Sbjct: 178 --YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 13/215 (6%)
Query: 749 LNFSVDDVVTRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAE 807
++ +++ T+L +GKG G V++ ++ +++V+A+K + + + E Q E
Sbjct: 1 MSLDPEELFTKLEK---IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QE 55
Query: 808 VQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGV 867
+ L + + G ++ +Y+ GS LL LD I+ +
Sbjct: 56 ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREI 113
Query: 868 AHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXY 927
GL YLH + IHRDIK+ N+L+ E LADFG+A
Sbjct: 114 LKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF- 169
Query: 928 GYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
++APE K+D++S G+ +E+ G+ P
Sbjct: 170 -WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 22/223 (9%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSGIV---YRVEIPSRQVIAVKKLWPVKNGELPERDQ 803
Q+LN +V +V RL VG G G V Y + RQ +AVKKL + R
Sbjct: 17 QELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRT 74
Query: 804 FSAEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWD 858
+ E++ L ++H+N++ LL + + L + L ++ + + D
Sbjct: 75 YR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV-KCQALSDEH 132
Query: 859 SRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX 918
++ ++ + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 133 VQF-LVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADE 183
Query: 919 XXXXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+L GK
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 22/223 (9%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSGIV---YRVEIPSRQVIAVKKLWPVKNGELPERDQ 803
Q+LN +V +V RL VG G G V Y + RQ +AVKKL + R
Sbjct: 9 QELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRT 66
Query: 804 FSAEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWD 858
+ E++ L ++H+N++ LL + + L + L ++ + + D
Sbjct: 67 YR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV-KCQALSDEH 124
Query: 859 SRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX 918
++ ++ + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 125 VQF-LVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLAR-----QADE 175
Query: 919 XXXXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+L GK
Sbjct: 176 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 765 IVGKGVSGIVYRVEIPSRQ----VIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G G VY + + +AVK K+ L +++F +E + ++ H +IV
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTC--KKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHH-DCV 879
+L+G T +++ Y G L L K L + L + +AYL +CV
Sbjct: 89 KLIGIIEEEPTWIIMELY-PYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 147
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
HRDI NILV L DFGL++ + +++PE +
Sbjct: 148 ----HRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRR 202
Query: 940 ITEKSDVYSYGVVLLEVLT-GKEP 962
T SDV+ + V + E+L+ GK+P
Sbjct: 203 FTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 765 IVGKGVSGIVYRVEIPSRQ----VIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G G VY + + +AVK K+ L +++F +E + ++ H +IV
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTC--KKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHH-DCV 879
+L+G T +++ Y G L L K L + L + +AYL +CV
Sbjct: 73 KLIGIIEEEPTWIIMELY-PYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 131
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
HRDI NILV L DFGL++ + +++PE +
Sbjct: 132 ----HRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRR 186
Query: 940 ITEKSDVYSYGVVLLEVLT-GKEP 962
T SDV+ + V + E+L+ GK+P
Sbjct: 187 FTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 765 IVGKGVSGIVYRVEIPSRQ----VIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G G VY + + +AVK K+ L +++F +E + ++ H +IV
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTC--KKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHH-DCV 879
+L+G T +++ Y G L L K L + L + +AYL +CV
Sbjct: 77 KLIGIIEEEPTWIIMELY-PYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 135
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
HRDI NILV L DFGL++ + +++PE +
Sbjct: 136 ----HRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRR 190
Query: 940 ITEKSDVYSYGVVLLEVLT-GKEP 962
T SDV+ + V + E+L+ GK+P
Sbjct: 191 FTTASDVWMFAVCMWEILSFGKQP 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
EV+ + + H NIV+L +T L+ +Y S G + L + ++R K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQ 121
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+ + Y H I+HRD+K+ N+L+ +ADFG + F
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP- 177
Query: 927 YGYIAPEYGYSLKIT-EKSDVYSYGVVLLEVLTGKEPTDSR 966
Y APE K + DV+S GV+L +++G P D +
Sbjct: 178 --YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 749 LNFSVDDVVTRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAE 807
++ +++ T+L +GKG G V++ ++ +++V+A+K + + + E Q E
Sbjct: 1 MSLDPEELFTKLEK---IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QE 55
Query: 808 VQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGV 867
+ L + + G ++ +Y+ GS LL LD I+ +
Sbjct: 56 ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREI 113
Query: 868 AHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXY 927
GL YLH + IHRDIK+ N+L+ E LADFG+A
Sbjct: 114 LKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF- 169
Query: 928 GYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
++APE K+D++S G+ +E+ G+ P
Sbjct: 170 -WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DF LA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
EV+ + + H NIV+L +T L+ +Y S G + L + ++R K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQ 121
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+ + Y H I+HRD+K+ N+L+ +ADFG + F
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP- 177
Query: 927 YGYIAPEYGYSLKIT-EKSDVYSYGVVLLEVLTGKEPTDSR 966
Y APE K + DV+S GV+L +++G P D +
Sbjct: 178 --YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
EV+ + + H NIV+L +T L+ +Y S G + L + ++R K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQ 121
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+ + Y H I+HRD+K+ N+L+ +ADFG + F
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP- 177
Query: 927 YGYIAPEYGYSLKIT-EKSDVYSYGVVLLEVLTGKEPTDSR 966
Y APE K + DV+S GV+L +++G P D +
Sbjct: 178 --YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
EV+ + + H NIV+L +T L+ +Y S G + L + ++R K
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF-RQ 119
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+ + Y H I+HRD+K+ N+L+ +ADFG + F
Sbjct: 120 IVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPP- 175
Query: 927 YGYIAPEYGYSLKIT-EKSDVYSYGVVLLEVLTGKEPTDSR 966
Y APE K + DV+S GV+L +++G P D +
Sbjct: 176 --YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
EV+ + + H NIV+L +T L+ +Y S G + L + ++R K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQ 121
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+ + Y H I+HRD+K+ N+L+ +ADFG + F
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPP- 177
Query: 927 YGYIAPEYGYSLKIT-EKSDVYSYGVVLLEVLTGKEPTDSR 966
Y APE K + DV+S GV+L +++G P D +
Sbjct: 178 --YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 764 NIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNG-----ELPE-RDQFSAEVQTLGSIR- 815
I+G+GVS +V R + P+ + AVK + G E+ E R+ EV L +
Sbjct: 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82
Query: 816 HKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
H NI++L L+FD + G L L EK + ++R KI+ + + LH
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMRALLEVICALH 141
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY- 934
I+HRD+K NIL+ L DFG + Y+APE
Sbjct: 142 K---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTP---SYLAPEII 195
Query: 935 ---------GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
GY ++ D++S GV++ +L G P
Sbjct: 196 ECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.5 bits (127), Expect = 7e-07, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
EV+ + + H NIV+L +T L+ +Y S G + L + ++R K
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQ 122
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+ + Y H I+HRD+K+ N+L+ +ADFG + F
Sbjct: 123 IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPP- 178
Query: 927 YGYIAPEYGYSLKIT-EKSDVYSYGVVLLEVLTGKEPTDSR 966
Y APE K + DV+S GV+L +++G P D +
Sbjct: 179 --YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 13/201 (6%)
Query: 766 VGKGVSGIVYRVE-IPSRQVIAVKKLWPVKNGELPERDQFSA--EVQTLGSIRHKNIVRL 822
+G+G G V++ + + +++A+K+ V+ + E SA E+ L ++HKNIVRL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKR---VRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
++ + L+F++ + L LD + + + GL + H V
Sbjct: 67 HDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV--- 122
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITE 942
+HRD+K N+L+ E LA+FGLA+ F Y P+ + K+
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYR--PPDVLFGAKLYS 180
Query: 943 KS-DVYSYGVVLLEVLTGKEP 962
S D++S G + E+ P
Sbjct: 181 TSIDMWSAGCIFAELANAGRP 201
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 764 NIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNG-----ELPE-RDQFSAEVQTLGSIR- 815
I+G+GVS +V R + P+ + AVK + G E+ E R+ EV L +
Sbjct: 10 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 69
Query: 816 HKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
H NI++L L+FD + G L L EK + ++R KI+ + + LH
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMRALLEVICALH 128
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY- 934
I+HRD+K NIL+ L DFG + Y+APE
Sbjct: 129 K---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTP---SYLAPEII 182
Query: 935 ---------GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
GY ++ D++S GV++ +L G P
Sbjct: 183 ECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 215
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 764 NIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNG-----ELPE-RDQFSAEVQTLGSIR- 815
I+G+GVS +V R + P+ + AVK + G E+ E R+ EV L +
Sbjct: 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82
Query: 816 HKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
H NI++L L+FD + G L L EK + ++R KI+ + + LH
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMRALLEVICALH 141
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY- 934
I+HRD+K NIL+ L DFG + Y+APE
Sbjct: 142 K---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTP---SYLAPEII 195
Query: 935 ---------GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
GY ++ D++S GV++ +L G P
Sbjct: 196 ECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G VY+ + +A K+ K+ E E + + E++ L + H IV+LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEE--ELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
+ ++ ++ G++ ++ E L + + L +LH IIHR
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHR 133
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGY--SLKITE- 942
D+K+ N+L+ + + LADFG++ ++APE ++K T
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 191
Query: 943 --KSDVYSYGVVLLEVLTGKEP 962
K+D++S G+ L+E+ + P
Sbjct: 192 DYKADIWSLGITLIEMAQIEPP 213
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 11/203 (5%)
Query: 764 NIVGKG-VSGIVYRVEIPSRQVIAVK---KLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
I+G+G S +V E+ + + A+K K +K ++P + E + + H
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFF 94
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
V+L + Y NG L + + F + +R+ + L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGKG- 152
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 153 --IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 210
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
++ SD+++ G ++ +++ G P
Sbjct: 211 ASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
EV L + H NI++L + R L+ + G L + ++ F + D+ I+
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-IMKQ 129
Query: 867 VAHGLAYLH-HDCVPPIIHRDIKSNNILVGPQFEAFL---ADFGLAKLFXXXXXXXXXXX 922
V G YLH H+ I+HRD+K N+L+ + L DFGL+ F
Sbjct: 130 VLSGTTYLHKHN----IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLG 185
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP----TDSRI 967
YIAPE K EK DV+S GV+L +L G P TD I
Sbjct: 186 TAY---YIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEI 230
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 766 VGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGC 825
+G G G VY+ + +A K+ K+ E E + + E++ L + H IV+LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEE--ELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 826 CNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHR 885
+ ++ ++ G++ ++ E L + + L +LH IIHR
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHR 141
Query: 886 DIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGY--SLKITE- 942
D+K+ N+L+ + + LADFG++ ++APE ++K T
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 199
Query: 943 --KSDVYSYGVVLLEVLTGKEP 962
K+D++S G+ L+E+ + P
Sbjct: 200 DYKADIWSLGITLIEMAQIEPP 221
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGR-------------TRLLLFDYISNGSLAGLLHEKK 852
+EV L S+ H+ +VR R T + +Y NG+L L+H +
Sbjct: 51 SEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN 110
Query: 853 VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK 909
+ D +++ + L+Y+H IIHRD+K NI + + DFGLAK
Sbjct: 111 LNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKI 76
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L + RH+NI+ + + YI + L++ K L D + +
Sbjct: 77 LLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 136
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 137 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
EV L + H NI++L + R L+ + G L + ++ F + D+ I+
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-IMKQ 112
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFL---ADFGLAKLFXXXXXXXXXXXX 923
V G YLH I+HRD+K N+L+ + L DFGL+ F
Sbjct: 113 VLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGT 169
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP----TDSRI 967
YIAPE K EK DV+S GV+L +L G P TD I
Sbjct: 170 AY---YIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEI 213
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKI 76
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L + RH+NI+ + + YI + L++ K L D + +
Sbjct: 77 LLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 136
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 137 RGLKYIHSANV---LHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 11/203 (5%)
Query: 764 NIVGKG-VSGIVYRVEIPSRQVIAVK---KLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
I+G+G S +V E+ + + A+K K +K ++P + E + + H
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFF 95
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
V+L + Y NG L + + F + +R+ + L YLH
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGKG- 153
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 154 --IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 211
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + FGLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 11/203 (5%)
Query: 764 NIVGKG-VSGIVYRVEIPSRQVIAVK---KLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
I+G+G S +V E+ + + A+K K +K ++P + E + + H
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFF 97
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
V+L + Y NG L + + F + +R+ + L YLH
Sbjct: 98 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGKG- 155
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 156 --IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 213
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 214 ACKSSDLWALGCIIYQLVAGLPP 236
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+L ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 7 QELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 66
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ K L D
Sbjct: 67 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK--LTDDHV 123
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + DFGLA+
Sbjct: 124 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 175
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 11/203 (5%)
Query: 764 NIVGKG-VSGIVYRVEIPSRQVIAVK---KLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
I+G+G S +V E+ + + A+K K +K ++P + E + + H
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFF 94
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
V+L + Y NG L + + F + +R+ + L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGKG- 152
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 153 --IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + D GLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRT--LREIKI 78
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 139 RGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKI 74
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 135 RGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + D GLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKI 76
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 77 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 136
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 137 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKI 94
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 95 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 154
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 155 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 25 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKI 82
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 83 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 142
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 143 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKI 74
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 135 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKI 74
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 135 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKI 74
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 135 RGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 92
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 148
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 208
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPP 230
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKI 94
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + Y+ + L++ K L D + +
Sbjct: 95 LLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 155 RGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKI 78
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 139 RGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 93
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 149
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPP 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 95
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 151
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 212 XKSSDLWALGCIIYQLVAGLPP 233
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 19/209 (9%)
Query: 766 VGKGVSGIVYRVEI-PSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG G V V+ ++++ A+K + K E E E+Q + + H +V L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ ++ D + G L L ++ V ++ I + L YL + IIH
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHL-QQNVHFKEETVKLFICELVMALDYLQNQ---RIIH 138
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY-------GYS 937
RD+K +NIL+ + DF +A + Y+APE GYS
Sbjct: 139 RDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTK---PYMAPEMFSSRKGAGYS 195
Query: 938 LKITEKSDVYSYGVVLLEVLTGKEPTDSR 966
+ D +S GV E+L G+ P R
Sbjct: 196 FAV----DWWSLGVTAYELLRGRRPYHIR 220
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKI 72
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 73 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 132
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 133 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKI 74
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 135 RGLKYIHSANV---LHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 17 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 73
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 74 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 129
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 189
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 190 CKSSDLWALGCIIYQLVAGLPP 211
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKI 79
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 80 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 139
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 140 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 23 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKI 80
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 81 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 140
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 141 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 14 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKI 71
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 72 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 131
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 132 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKI 78
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 139 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 14 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 70
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 71 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 126
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 186
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 187 CKSSDLWALGCIIYQLVAGLPP 208
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 93
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 149
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPP 231
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 16 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 72
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 73 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 128
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 188
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 189 CKSSDLWALGCIIYQLVAGLPP 210
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 95
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 151
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPP 233
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 95
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 151
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 21 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 77
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 78 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 133
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 193
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 194 CKSSDLWALGCIIYQLVAGLPP 215
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 15 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 71
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 72 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 127
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 187
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPP 209
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 92
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 148
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 208
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPP 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 93
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 149
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPP 231
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQF-SAEVQTLGSI 814
V +++ VGKG G V+R + + +AVK E+ F E+ +
Sbjct: 6 VARQVALVECVGKGRYGEVWR-GLWHGESVAVKIF-----SSRDEQSWFRETEIYNTVLL 59
Query: 815 RHKNIVRLLG---CCNNGRTRLLLF-DYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHG 870
RH NI+ + N T+L L Y +GSL L + L+ ++ + A G
Sbjct: 60 RHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQT--LEPHLALRLAVSAACG 117
Query: 871 LAYLHHDCV-----PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX--X 923
LA+LH + P I HRD KS N+LV + +AD GLA +
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR 177
Query: 924 XXXYGYIAPEY------GYSLKITEKSDVYSYGVVLLEV 956
Y+APE + + +D++++G+VL E+
Sbjct: 178 VGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 96
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 152
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 212
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPP 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S +V E+ + + A+K L +K ++P + E + + H V
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 95
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 151
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPP 233
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 766 VGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERD--QFSAEVQTLGSIRHKNIVRL 822
+GKG +V R V++ + Q A K + +L RD + E + ++H NIVRL
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKI---INTKKLSARDHQKLEREARICRLLKHPNIVRL 86
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+ L+FD ++ G L + ++ + + D+ + I + + + H V
Sbjct: 87 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH-CIQQILEAVLHCHQMGV--- 142
Query: 883 IHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
+HRD+K N+L+ + + LADFGLA GY++PE
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
+ D+++ GV+L +L G P
Sbjct: 201 YGKPVDLWACGVILYILLVGYPP 223
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q+LN ++ +V R + + VG G G + + + +AVKKL + + +
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
E++ L ++H+N++ LL R+ + L ++ L ++ +K L D
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHV 127
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXX 920
+I + GL Y+H IIHRD+K +N+ V E + D GLA+
Sbjct: 128 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDDEM 179
Query: 921 XXXXXXYGYIAPEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
Y APE + + + D++S G ++ E+LTG+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 766 VGKGVSGIVYRVE-IPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G+V++ + Q++A+KK ++ + ++ E++ L ++H N+V LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALR-EIRMLKQLKHPNLVNLLE 69
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYK----------IILGVAHGLAYL 874
R L+F+Y + +LHE LD RY+ I + +
Sbjct: 70 VFRRKRRLHLVFEYCDHT----VLHE----LD---RYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 875 H-HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE 933
H H+C IHRD+K NIL+ L DFG A+L Y +PE
Sbjct: 119 HKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYR--SPE 172
Query: 934 -------YGYSLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNGELRER 984
YG + DV++ G V E+L+G P S + D ++I G+L R
Sbjct: 173 LLVGDTQYGPPV------DVWAIGCVFAELLSGVPLWPGKSDV-DQLYLIRKTLGDLIPR 225
Query: 985 KRE-FTT 990
++ F+T
Sbjct: 226 HQQVFST 232
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKI 78
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 139 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKI 72
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 73 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 132
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 133 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKI 79
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 80 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 139
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 140 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGL--------LHEKKVFLDWD 858
EV L ++H NIV L + ++ L+F+Y+ L +H K+FL
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFL--- 106
Query: 859 SRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK 909
+ GLAY H ++HRD+K N+L+ + E LADFGLA+
Sbjct: 107 ------FQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 17/205 (8%)
Query: 766 VGKGVSGIVYRVEIPSR--QVIAVKKLWPVKNGE--LP-ERDQFSAEVQTLGSIRHKNIV 820
+G+G G V++ + +A+K++ V+ GE +P + A ++ L + H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 821 RLLGCCNNGRTR-----LLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
RL C RT L+F+++ L + + ++ ++ + GL +LH
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
++HRD+K NILV + LADFGLA+++ Y APE
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW---YRAPEVL 191
Query: 936 YSLKITEKSDVYSYGVVLLEVLTGK 960
D++S G + E+ K
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 17/205 (8%)
Query: 766 VGKGVSGIVYRVEIPSR--QVIAVKKLWPVKNGE--LP-ERDQFSAEVQTLGSIRHKNIV 820
+G+G G V++ + +A+K++ V+ GE +P + A ++ L + H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 821 RLLGCCNNGRTR-----LLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
RL C RT L+F+++ L + + ++ ++ + GL +LH
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
++HRD+K NILV + LADFGLA+++ Y APE
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW---YRAPEVL 191
Query: 936 YSLKITEKSDVYSYGVVLLEVLTGK 960
D++S G + E+ K
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 17/205 (8%)
Query: 766 VGKGVSGIVYRVEIPSR--QVIAVKKLWPVKNGE--LP-ERDQFSAEVQTLGSIRHKNIV 820
+G+G G V++ + +A+K++ V+ GE +P + A ++ L + H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 821 RLLGCCNNGRTR-----LLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
RL C RT L+F+++ L + + ++ ++ + GL +LH
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
++HRD+K NILV + LADFGLA+++ Y APE
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW---YRAPEVL 191
Query: 936 YSLKITEKSDVYSYGVVLLEVLTGK 960
D++S G + E+ K
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 34/234 (14%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV I R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVVAAYDAILERNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFD-YI----SNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL ++ D YI + +L+ ++ HE+ +L Y+
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL----LYQ 134
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
+++G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 135 MLVGIKH----LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTP 184
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITW 976
Y APE + E D++S GV++ E++ G P HI W
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 765 IVGKGVSGIVYRVEIPSRQ-------VIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHK 817
++G G G V+ V S + +KK V+ + E + E Q L IR
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTR--TERQVLEHIRQS 118
Query: 818 NIVRLLGCCNNGRTRL-LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHH 876
+ L T+L L+ DYI+ G L L +++ F + +++ + V + L H
Sbjct: 119 PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF----TEHEVQIYVGEIVLALEH 174
Query: 877 DCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY-- 934
II+RDIK NIL+ L DFGL+K F Y+AP+
Sbjct: 175 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIE-YMAPDIVR 233
Query: 935 GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
G + D +S GV++ E+LTG P
Sbjct: 234 GGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 12/219 (5%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q + D V+ +G G G+V+RV E + A K V +++
Sbjct: 146 QPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKF---VMTPHESDKETVR 202
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIIL 865
E+QT+ +RH +V L + +++++++S G L + ++ + D + +
Sbjct: 203 KEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR 262
Query: 866 GVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQF--EAFLADFGLAKLFXXXXXXXXXXXX 923
V GL ++H + +H D+K NI+ + E L DFGL
Sbjct: 263 QVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 319
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+ APE + +D++S GV+ +L+G P
Sbjct: 320 AE---FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 802 DQFSAEVQTLGSIRHKNIVRLLGCCN--NGRTRLLLFDYISNGSLAGLLHEKKVFLDWDS 859
+Q E+ L + H N+V+L+ + N ++F+ ++ G + + K + D
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX 919
Y + G+ YLH+ IIHRDIK +N+LVG +ADFG++ F
Sbjct: 141 FY--FQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLS 195
Query: 920 XXXXXXXYGYIAPEYGYSLKITEKS------DVYSYGVVLLEVLTGKEP-TDSRI 967
++APE SL T K DV++ GV L + G+ P D RI
Sbjct: 196 NTVGTP--AFMAPE---SLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A+KK+ P ++ +R E++
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKI 78
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQIL 138
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 139 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG Y + ++ +++V A K + + ++++ S E+ S+ + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ ++ + SL L +K + ++RY + G+ YLH++ +IH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RVIH 165
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY----GYSLKI 940
RD+K N+ + + + DFGLA YIAPE G+S ++
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTP--NYIAPEVLCKKGHSFEV 223
Query: 941 TEKSDVYSYGVVLLEVLTGKEPTDS 965
D++S G +L +L GK P ++
Sbjct: 224 ----DIWSLGCILYTLLVGKPPFET 244
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 884 HRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
HRD+K NILV A+L DFG+A Y Y APE T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLY-YXAPERFSESHATYR 215
Query: 944 SDVYSYGVVLLEVLTGKEP--TDSRIPDGAHI 973
+D+Y+ VL E LTG P D GAHI
Sbjct: 216 ADIYALTCVLYECLTGSPPYQGDQLSVXGAHI 247
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG Y + ++ +++V A K + + ++++ S E+ S+ + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ ++ + SL L +K + ++RY + G+ YLH++ +IH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RVIH 165
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY----GYSLKI 940
RD+K N+ + + + DFGLA YIAPE G+S ++
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP--NYIAPEVLCKKGHSFEV 223
Query: 941 TEKSDVYSYGVVLLEVLTGKEPTDS 965
D++S G +L +L GK P ++
Sbjct: 224 ----DIWSLGCILYTLLVGKPPFET 244
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++ EV L IRH NI+ L N +L+ + +S G L L EK+ + D
Sbjct: 52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE-DEA 110
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + G+ YLH I H D+K NI++ P L DFG+A
Sbjct: 111 TQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH------K 161
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+G ++APE + ++D++S GV+ +L+G P
Sbjct: 162 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG Y + ++ +++V A K + + ++++ S E+ S+ + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ ++ + SL L +K + ++RY + G+ YLH++ +IH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RVIH 165
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY----GYSLKI 940
RD+K N+ + + + DFGLA YIAPE G+S ++
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTP--NYIAPEVLCKKGHSFEV 223
Query: 941 TEKSDVYSYGVVLLEVLTGKEPTDS 965
D++S G +L +L GK P ++
Sbjct: 224 ----DIWSLGCILYTLLVGKPPFET 244
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 14/210 (6%)
Query: 765 IVGKGVSGIVYRVEIPSR-QVIAVKKLWPVKNGELPERDQFSA---EVQTLGSIRHKNIV 820
++GKG G V + + AVK L K + + D E + L R+ +
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVL---KKDVILQDDDVECTMTEKRILSLARNHPFL 86
Query: 821 RLLGCCNNGRTRLL-LFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
L CC RL + ++++ G L + + + F + +R+ + L +LH
Sbjct: 87 TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMFLHDKG- 144
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
II+RD+K +N+L+ + LADFG+ K YIAPE +
Sbjct: 145 --IIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEILQEML 200
Query: 940 ITEKSDVYSYGVVLLEVLTGKEPTDSRIPD 969
D ++ GV+L E+L G P ++ D
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEAENED 230
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 752 SVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQT 810
V DV R ++ + +G+G G+V +V +A++K+ P ++ +R E++
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRT--LREIKI 78
Query: 811 LGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVA 868
L RH+NI+ + + YI + L++ K L D + +
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXX-XXXXXXXXY 927
GL Y+H V +HRD+K +N+L+ + + DFGLA++
Sbjct: 139 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 928 GYIAPEYGYSLKITEKS-DVYSYGVVLLEVLTGK 960
Y APE + K KS D++S G +L E+L+ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 34/234 (14%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV I R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFD-YI----SNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL ++ D YI + +L+ ++ HE+ +L Y+
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL----LYQ 134
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
+++G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 135 MLVGIKH----LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTP 184
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITW 976
Y APE + E D++S GV++ E++ G P HI W
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++ EV L IRH NI+ L N +L+ + +S G L L EK+ + D
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE-DEA 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + G+ YLH I H D+K NI++ P L DFG+A
Sbjct: 118 TQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH------K 168
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+G ++APE + ++D++S GV+ +L+G P
Sbjct: 169 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 766 VGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+GKG Y + ++ +++V A K + + ++++ S E+ S+ + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ ++ + SL L +K + ++RY + G+ YLH++ +IH
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RVIH 149
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY----GYSLKI 940
RD+K N+ + + + DFGLA YIAPE G+S ++
Sbjct: 150 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP--NYIAPEVLCKKGHSFEV 207
Query: 941 TEKSDVYSYGVVLLEVLTGKEPTDS 965
D++S G +L +L GK P ++
Sbjct: 208 ----DIWSLGCILYTLLVGKPPFET 228
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 8/161 (4%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
EV+ + H NIV+L +T L+ +Y S G + L + ++R K
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF-RQ 121
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+ + Y H I+HRD+K+ N+L+ +ADFG + F
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPP- 177
Query: 927 YGYIAPEYGYSLKIT-EKSDVYSYGVVLLEVLTGKEPTDSR 966
Y APE K + DV+S GV+L +++G P D +
Sbjct: 178 --YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 18/211 (8%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKL-WPVKNGELPERDQFSAEVQTLGS 813
V+ R +G G GIV + +AVKKL P +N +R E+ L
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRA--YRELVLLKC 77
Query: 814 IRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVA 868
+ HKNI+ LL +T + L + + +L ++H + LD + ++ +
Sbjct: 78 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHERMSYLLYQML 134
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
G+ +LH IIHRD+K +NI+V + DFGLA+
Sbjct: 135 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRY 188
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
Y APE + E D++S G ++ E++ G
Sbjct: 189 YRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++ EV L IRH NI+ L N +L+ + +S G L L EK+ + D
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE-DEA 131
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + G+ YLH I H D+K NI++ P L DFG+A
Sbjct: 132 TQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH------K 182
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+G ++APE + ++D++S GV+ +L+G P
Sbjct: 183 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 12/219 (5%)
Query: 747 QKLNFSVDDVVTRLSDTNIVGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFS 805
Q + D V+ +G G G+V+RV E + A K V +++
Sbjct: 40 QPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKF---VMTPHESDKETVR 96
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIIL 865
E+QT+ +RH +V L + +++++++S G L + ++ + D + +
Sbjct: 97 KEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR 156
Query: 866 GVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQF--EAFLADFGLAKLFXXXXXXXXXXXX 923
V GL ++H + +H D+K NI+ + E L DFGL
Sbjct: 157 QVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 213
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+ APE + +D++S GV+ +L+G P
Sbjct: 214 AE---FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 11/202 (5%)
Query: 765 IVGKG-VSGIVYRVEIPSRQVIAVKKLWP---VKNGELPERDQFSAEVQTLGSIRHKNIV 820
I+G+G S V E+ + + A+K L +K ++P + E + + H V
Sbjct: 37 ILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVP---YVTRERDVMSRLDHPFFV 93
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
+L + Y NG L + + F + +R+ + L YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK--- 149
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKI 940
IIHRD+K NIL+ + DFG AK+ Y++PE
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 941 TEKSDVYSYGVVLLEVLTGKEP 962
+ SD+++ G ++ +++ G P
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPP 231
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV I R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFD-YISNGSL-AGLLHEKKVFLDWDSRYKIILGVAHG 870
+ HKNI+ LL ++ D YI + A L ++ LD + ++ + G
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ +LH IIHRD+K +NI+V + DFGLA+ Y
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYR 192
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITW 976
APE + E D++S G ++ E++ G P HI W
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
E+ L +RH +I++L +++ +Y + G L + EKK + + R +
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQ 116
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+ + Y H I+HRD+K N+L+ +ADFGL+ +
Sbjct: 117 IICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSP-- 171
Query: 927 YGYIAPEY-GYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
Y APE L + DV+S G+VL +L G+ P D
Sbjct: 172 -NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD 210
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGR-------------TRLLLFDYISNGSLAGLLHEKK 852
+EV L S+ H+ +VR R T + +Y N +L L+H +
Sbjct: 51 SEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSEN 110
Query: 853 VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK 909
+ D +++ + L+Y+H IIHRD+K NI + + DFGLAK
Sbjct: 111 LNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 22/204 (10%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRL------LGCCNNGRTRLLLFDYISNGSLAGLLH--EKK 852
R+++ E+Q + + H N+V L LL +Y G L L+ E
Sbjct: 56 RERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENC 115
Query: 853 VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLA---DFGLAK 909
L ++ ++ L YLH + IIHRD+K NI++ P + + D G AK
Sbjct: 116 CGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172
Query: 910 LFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPD 969
Y+APE K T D +S+G + E +TG P +P+
Sbjct: 173 ELDQGELCTEFVGTLQ---YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF---LPN 226
Query: 970 GAHIITWVNGELRERKREFTTILD 993
+ W +G++RE+ E + D
Sbjct: 227 W-QPVQW-HGKVREKSNEHIVVYD 248
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 22/204 (10%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRL------LGCCNNGRTRLLLFDYISNGSLAGLLH--EKK 852
R+++ E+Q + + H N+V L LL +Y G L L+ E
Sbjct: 57 RERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENC 116
Query: 853 VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLA---DFGLAK 909
L ++ ++ L YLH + IIHRD+K NI++ P + + D G AK
Sbjct: 117 CGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 173
Query: 910 LFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPD 969
Y+APE K T D +S+G + E +TG P +P+
Sbjct: 174 ELDQGELCTEFVGTLQ---YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF---LPN 227
Query: 970 GAHIITWVNGELRERKREFTTILD 993
+ W +G++RE+ E + D
Sbjct: 228 W-QPVQW-HGKVREKSNEHIVVYD 249
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 14/210 (6%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV + R V A+KKL P +N +R E+ +
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV-AIKKLSRPFQNQTHAKRAY--RELVLMK 71
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFDYISNGSL--AGLLHEKKVFLDWDSRYKIILGVAHG 870
+ HKNI+ LL +T D L A L ++ LD + ++ + G
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXG 131
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ +LH IIHRD+K +NI+V + DFGLA+ Y Y
Sbjct: 132 IKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRY-YR 185
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
APE + E D++S G ++ E++ K
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 15/203 (7%)
Query: 766 VGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERD--QFSAEVQTLGSIRHKNIVRL 822
+GKG +V R V++ + A K + +L RD + E + ++H NIVRL
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKI---INTKKLSARDHQKLEREARICRLLKHSNIVRL 68
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+ L+FD ++ G L + ++ + + D+ + I + + + H V
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH-CIQQILEAVLHCHQMGV--- 124
Query: 883 IHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
+HRD+K N+L+ + + LADFGLA GY++PE
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKEA 182
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
+ D+++ GV+L +L G P
Sbjct: 183 YGKPVDIWACGVILYILLVGYPP 205
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV I R V A+KKL P +N +R E+ +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 79
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFD-YISNGSL-AGLLHEKKVFLDWDSRYKIILGVAHG 870
+ HKNI+ LL ++ D YI + A L ++ LD + ++ + G
Sbjct: 80 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 139
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ +LH IIHRD+K +NI+V + DFGLA+ Y
Sbjct: 140 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YR 193
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITW 976
APE + E D++S G ++ E++ G P HI W
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 235
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 63/277 (22%), Positives = 118/277 (42%), Gaps = 40/277 (14%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R+ EV L I+H N++ L N +L+ + ++ G L L EK+ + ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + +G+ YLH I H D+K NI++ P+ + DFGLA
Sbjct: 118 -EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 917 XXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP--TDSRIPDGAHII 974
++APE + ++D++S GV+ +L+G P D++ A+ +
Sbjct: 174 FKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-V 229
Query: 975 TWVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAM 1034
+ VN E + T+ L + + R LL + P++R T++D
Sbjct: 230 SAVNYEFEDEYFSNTSALAKDFIRR---------------LLVKD--PKKRMTIQD---- 268
Query: 1035 LKEIRHENDDLEKPNSLSRAVTNPKAAVHCSSFSRSA 1071
++H KP +A++ +AV+ F + A
Sbjct: 269 --SLQHP---WIKPKDTQQALSRKASAVNMEKFKKFA 300
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV I R V A+KKL P +N +R E+ +
Sbjct: 24 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 80
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFD-YISNGSL-AGLLHEKKVFLDWDSRYKIILGVAHG 870
+ HKNI+ LL ++ D YI + A L ++ LD + ++ + G
Sbjct: 81 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 140
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ +LH IIHRD+K +NI+V + DFGLA+ Y
Sbjct: 141 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRY---YR 194
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITW 976
APE + E D++S G ++ E++ G P HI W
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 236
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV + R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV-AIKKLSRPFQNQTHAKRAY--RELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL +T + L + + +L ++ HE+ +L Y+
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL----LYQ 134
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
++ G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 135 MLCGIKH----LHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPY 185
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
Y Y APE + E D++S G ++ E++ K
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSI-----RHKNI 819
++G+G V V + I K V EL D+ VQT + H +
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMK---VVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 83
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
V L C + +Y++ G L + ++ + +R+ ++ L YLH
Sbjct: 84 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLHE--- 139
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE------ 933
II+RD+K +N+L+ + L D+G+ K YIAPE
Sbjct: 140 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGED 197
Query: 934 YGYSLKITEKSDVYSYGVVLLEVLTGKEPTD 964
YG+S+ D ++ GV++ E++ G+ P D
Sbjct: 198 YGFSV------DWWALGVLMFEMMAGRSPFD 222
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 867 VAHGLAYLH-HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXX 925
VA G+ +L C IHRD+ + NIL+ + DFGLA+
Sbjct: 208 VARGMEFLSSRKC----IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 926 XYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRER 984
++APE + + KSDV+SYGV+L E+ + G P D G +R R
Sbjct: 264 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREG-MRMR 322
Query: 985 KREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEI 1038
E++T E+ Q++ L C + P+ERP ++ L ++
Sbjct: 323 APEYST--------------PEIYQIM---LDCWHRDPKERPRFAELVEKLGDL 359
Score = 31.2 bits (69), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 759 RLSDTNIVGKGVSGIVYRV------EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLG 812
RL +G+G G V + + P+ + +AVK L + E E++ L
Sbjct: 28 RLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKML--KEGATASEYKALMTELKILT 85
Query: 813 SI-RHKNIVRLLGCC-NNGRTRLLLFDYISNGSLAGLLHEKK--VFLDWDS 859
I H N+V LLG C G +++ +Y G+L+ L K+ FL+ D+
Sbjct: 86 HIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDA 136
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV + R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV-AIKKLSRPFQNQTHAKRAY--RELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL +T + L + + +L ++ HE+ +L Y+
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL----LYQ 134
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
++ G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 135 MLCGIKH----LHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPY 185
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
Y Y APE + E D++S G ++ E++ K
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV I R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFD-YISNGSL-AGLLHEKKVFLDWDSRYKIILGVAHG 870
+ HKNI+ LL ++ D YI + A L ++ LD + ++ + G
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ +LH IIHRD+K +NI+V + DFGLA+ Y
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITW 976
APE + E D++S G ++ E++ G P HI W
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSI-----RHKNI 819
++G+G V V + I K V EL D+ VQT + H +
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMK---VVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 68
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
V L C + +Y++ G L + ++ + +R+ ++ L YLH
Sbjct: 69 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLHERG- 126
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE------ 933
II+RD+K +N+L+ + L D+G+ K YIAPE
Sbjct: 127 --IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGED 182
Query: 934 YGYSLKITEKSDVYSYGVVLLEVLTGKEPTD 964
YG+S+ D ++ GV++ E++ G+ P D
Sbjct: 183 YGFSV------DWWALGVLMFEMMAGRSPFD 207
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV I R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFD-YISNGSL-AGLLHEKKVFLDWDSRYKIILGVAHG 870
+ HKNI+ LL ++ D YI + A L ++ LD + ++ + G
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ +LH IIHRD+K +NI+V + DFGLA+ Y
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITW 976
APE + E D++S G ++ E++ G P HI W
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV + R V A+KKL P +N +R E+ +
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV-AIKKLSRPFQNQTHAKR--AYRELVLMK 116
Query: 813 SIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL +T + L + + +L ++ HE+ +L Y+
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL----LYQ 172
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
++ G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 173 MLCGIKH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 225
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
Y APE + E D++S G ++ E++ K
Sbjct: 226 TRY---YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 98/228 (42%), Gaps = 33/228 (14%)
Query: 764 NIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS-AEVQTLG-SIRHKNIV 820
+++G G G IVYR +R V AVK++ LPE F+ EVQ L S H N++
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDV-AVKRI-------LPECFSFADREVQLLRESDEHPNVI 81
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWD----SRYKIILGVAHGLAYLHH 876
R C R F YI+ A L E D+ ++ GLA+LH
Sbjct: 82 RYF-CTEKDRQ----FQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH- 135
Query: 877 DCVPPIIHRDIKSNNILVGP-----QFEAFLADFGLA-KLFXXXXXXXXXXXXXXXYGYI 930
I+HRD+K +NIL+ + +A ++DFGL KL G+I
Sbjct: 136 --SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193
Query: 931 APEY---GYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHII 974
APE T D++S G V V++ G P + A+I+
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL 241
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSI-----RHKNI 819
++G+G V V + I K V EL D+ VQT + H +
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMK---VVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 72
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
V L C + +Y++ G L + ++ + +R+ ++ L YLH
Sbjct: 73 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLHERG- 130
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE------ 933
II+RD+K +N+L+ + L D+G+ K YIAPE
Sbjct: 131 --IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGED 186
Query: 934 YGYSLKITEKSDVYSYGVVLLEVLTGKEPTD 964
YG+S+ D ++ GV++ E++ G+ P D
Sbjct: 187 YGFSV------DWWALGVLMFEMMAGRSPFD 211
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 94/247 (38%), Gaps = 37/247 (14%)
Query: 742 DFTPFQKLNFSVDDVVTRLSDT-----------------NIVGKGVSGIVYRVEIPS-RQ 783
DF +K N ++D+ ++R DT ++G+G G V V S R+
Sbjct: 42 DFPALRK-NKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRK 100
Query: 784 VIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGS 843
V A+K L + + + F E + +V+L + R ++ +Y+ G
Sbjct: 101 VYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGD 160
Query: 844 LAGLLHEKKVFLDWDSRYK----IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFE 899
L L+ V W Y + L H + + IHRD+K +N+L+
Sbjct: 161 LVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGH 211
Query: 900 AFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY----GYSLKITEKSDVYSYGVVLLE 955
LADFG + YI+PE G + D +S GV L E
Sbjct: 212 LKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE 270
Query: 956 VLTGKEP 962
+L G P
Sbjct: 271 MLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 94/247 (38%), Gaps = 37/247 (14%)
Query: 742 DFTPFQKLNFSVDDVVTRLSDT-----------------NIVGKGVSGIVYRVEIPS-RQ 783
DF +K N ++D+ ++R DT ++G+G G V V S R+
Sbjct: 37 DFPALRK-NKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRK 95
Query: 784 VIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGS 843
V A+K L + + + F E + +V+L + R ++ +Y+ G
Sbjct: 96 VYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGD 155
Query: 844 LAGLLHEKKVFLDWDSRYK----IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFE 899
L L+ V W Y + L H + + IHRD+K +N+L+
Sbjct: 156 LVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGH 206
Query: 900 AFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY----GYSLKITEKSDVYSYGVVLLE 955
LADFG + YI+PE G + D +S GV L E
Sbjct: 207 LKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE 265
Query: 956 VLTGKEP 962
+L G P
Sbjct: 266 MLVGDTP 272
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV + R V A+KKL P +N +R E+ +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV-AIKKLSRPFQNQTHAKRAY--RELVLMK 72
Query: 813 SIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL +T + L + + +L ++ HE+ +L Y+
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL----LYQ 128
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
++ G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 129 MLCGIKH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPY 179
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
Y Y APE + E D++S G ++ E++ K
Sbjct: 180 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV + R V A+KKL P +N +R E+ +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV-AIKKLSRPFQNQTHAKRAY--RELVLMK 72
Query: 813 SIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL +T + L + + +L ++ HE+ +L Y+
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL----LYQ 128
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
++ G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 129 MLCGIKH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPY 179
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
Y Y APE + E D++S G ++ E++ K
Sbjct: 180 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV + R V A+KKL P +N +R E+ +
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV-AIKKLSRPFQNQTHAKRAY--RELVLMK 71
Query: 813 SIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL +T + L + + +L ++ HE+ +L Y+
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL----LYQ 127
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
++ G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 128 MLCGIKH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPY 178
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
Y Y APE + E D++S G ++ E++ K
Sbjct: 179 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 33/240 (13%)
Query: 761 SDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIV 820
++ ++G G G+V++ ++ +A+KK+ L ++ + E+Q + ++H N+V
Sbjct: 43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKV-------LQDKRFKNRELQIMRIVKHPNVV 95
Query: 821 RLLG-CCNNGRTRLLLF-----------DYISNGSLAGLLHEKKVFLDWDSRYKIILGVA 868
L +NG + +F Y ++ A L + L Y+++
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLL---- 151
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXY 927
LAY+H I HRDIK N+L+ P L DFG AK+
Sbjct: 152 RSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-- 206
Query: 928 GYIAPEYGY-SLKITEKSDVYSYGVVLLEVLTGKE--PTDSRIPDGAHIITWVNGELRER 984
Y APE + + T D++S G V+ E++ G+ P +S I II + RE+
Sbjct: 207 -YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQ 265
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 26/211 (12%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSI-----RHKNI 819
++G+G V V + I + V EL D+ VQT + H +
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMR---VVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 115
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
V L C + +Y++ G L + ++ + +R+ ++ L YLH
Sbjct: 116 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLHERG- 173
Query: 880 PPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE------ 933
II+RD+K +N+L+ + L D+G+ K YIAPE
Sbjct: 174 --IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGED 229
Query: 934 YGYSLKITEKSDVYSYGVVLLEVLTGKEPTD 964
YG+S+ D ++ GV++ E++ G+ P D
Sbjct: 230 YGFSV------DWWALGVLMFEMMAGRSPFD 254
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 34/234 (14%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV I R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFD-YI----SNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL ++ D YI + +L+ ++ HE+ +L Y+
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL----LYQ 134
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
+++G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 135 MLVGIKH----LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTP 184
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITW 976
Y APE + E D++S G ++ E++ G P HI W
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 14/210 (6%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV + R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFDYISNGSL--AGLLHEKKVFLDWDSRYKIILGVAHG 870
+ HKNI+ LL +T D L A L ++ LD + ++ + G
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXG 138
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ +LH IIHRD+K +NI+V + DFGLA+ Y
Sbjct: 139 IKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
APE + E D++S G ++ E++ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 14/210 (6%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV + R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFDYISNGSL--AGLLHEKKVFLDWDSRYKIILGVAHG 870
+ HKNI+ LL +T D L A L ++ LD + ++ + G
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXG 138
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ +LH IIHRD+K +NI+V + DFGLA+ Y
Sbjct: 139 IKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
APE + E D++S G ++ E++ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 119/307 (38%), Gaps = 56/307 (18%)
Query: 759 RLSDTNIVGKGVSGIVYRVE-IPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIR-- 815
RL ++ +G VY + + S + A+K+L + N E R A +Q + ++
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRL--LSNEEEKNR----AIIQEVCFMKKL 82
Query: 816 --HKNIVRLLGCC-------NNGRTRLLLFDYISNGSLAGLLH--EKKVFLDWDSRYKII 864
H NIV+ + G+ LL + G L L E + L D+ KI
Sbjct: 83 SGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIF 142
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXX 924
+ ++H PPIIHRD+K N+L+ Q L DFG A
Sbjct: 143 YQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRR 201
Query: 925 XXYG----------YIAPEY--GYS-LKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGA 971
Y PE YS I EK D+++ G +L + + P + DGA
Sbjct: 202 ALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE----DGA 257
Query: 972 HIITWVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDV 1031
+ VNG+ + + L I+ MLQV PEER ++ +V
Sbjct: 258 K-LRIVNGKYSIPPHDTQYTVFHSL-------IRAMLQV----------NPEERLSIAEV 299
Query: 1032 TAMLKEI 1038
L+EI
Sbjct: 300 VHQLQEI 306
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 99/234 (42%), Gaps = 34/234 (14%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV I R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFD-YI----SNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL ++ D YI + +L+ ++ HE+ +L Y+
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL----LYQ 134
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
++ G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 135 MLCGIKH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTP 184
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITW 976
Y APE + E D++S G ++ E++ G P HI W
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 18/214 (8%)
Query: 764 NIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGEL---PERDQFSAEVQTLGSIRHKNIV 820
++GKG G V ++ VK + ++ + ++F E + H ++
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 821 RLLGCCNNGRTR------LLLFDYISNGSLAGLLHEKKVF-----LDWDSRYKIILGVAH 869
+L+G R + +++ ++ +G L L ++ L + + ++ +A
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 870 GLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGY 929
G+ YL IHRD+ + N ++ +ADFGL++ +
Sbjct: 149 GMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKW 205
Query: 930 IAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEP 962
+A E T SDV+++GV + E++T G+ P
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 766 VGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G I + V S Q AVK + K E + + +A G H NIV+L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII--SKRMEANTQKEITALKLCEG---HPNIVKLHE 73
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KIILGVAHGLAYLHHDCVPP 881
++ L+ + ++ G L + +KK F + ++ Y K++ V+H HD
Sbjct: 74 VFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHM-----HDV--G 126
Query: 882 IIHRDIKSNNILVGPQ---FEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
++HRD+K N+L + E + DFG A+L Y APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARL--KPPDNQPLKTPCFTLHYAAPELLNQN 184
Query: 939 KITEKSDVYSYGVVLLEVLTGKEPTDSR 966
E D++S GV+L +L+G+ P S
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQSH 212
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 94/247 (38%), Gaps = 37/247 (14%)
Query: 742 DFTPFQKLNFSVDDVVTRLSDT-----------------NIVGKGVSGIVYRVEIPS-RQ 783
DF +K N ++D+ ++R DT ++G+G G V V S R+
Sbjct: 42 DFPALRK-NKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRK 100
Query: 784 VIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGS 843
V A+K L + + + F E + +V+L + R ++ +Y+ G
Sbjct: 101 VYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGD 160
Query: 844 LAGLLHEKKVFLDWDSRYK----IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFE 899
L L+ V W Y + L H + + IHRD+K +N+L+
Sbjct: 161 LVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGH 211
Query: 900 AFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY----GYSLKITEKSDVYSYGVVLLE 955
LADFG + YI+PE G + D +S GV L E
Sbjct: 212 LKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE 270
Query: 956 VLTGKEP 962
+L G P
Sbjct: 271 MLVGDTP 277
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV + R V A+KKL P +N +R E+ +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 79
Query: 813 SIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL +T + L + + +L ++ HE+ +L Y+
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL----LYQ 135
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
++ G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 136 MLCGIKH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTP 185
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
Y APE + E D++S G ++ E++ K
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV + R V A+KKL P +N +R E+ +
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 116
Query: 813 SIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL +T + L + + +L ++ HE+ +L Y+
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL----LYQ 172
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
++ G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 173 MLCGIKH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 225
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
Y APE + E D++S G ++ E++ K
Sbjct: 226 TRY---YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV + R V A+KKL P +N +R E+ +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 79
Query: 813 SIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL +T + L + + +L ++ HE+ +L Y+
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL----LYQ 135
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
++ G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 136 MLCGIKH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTP 185
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
Y APE + E D++S G ++ E++ K
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV + R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL +T + L + + +L ++ HE+ +L Y+
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL----LYQ 134
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
++ G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 135 MLCGIKH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTP 184
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
Y APE + E D++S G ++ E++ K
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 99/234 (42%), Gaps = 34/234 (14%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV I R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFD-YI----SNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL ++ D YI + +L+ ++ HE+ +L Y+
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL----LYQ 134
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
++ G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 135 MLCGIKH----LHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTP 184
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITW 976
Y APE + E D++S G ++ E++ G P HI W
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV + R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL +T + L + + +L ++ HE+ +L Y+
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL----LYQ 134
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
++ G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 135 MLCGIKH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTP 184
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
Y APE + E D++S G ++ E++ K
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV + R V A+KKL P +N +R E+ +
Sbjct: 21 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 77
Query: 813 SIRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL +T + L + + +L ++ HE+ +L Y+
Sbjct: 78 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL----LYQ 133
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
++ G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 134 MLCGIKH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTP 183
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
Y APE + E D++S G ++ E++ K
Sbjct: 184 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 18/211 (8%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRVEIPSRQV-IAVKKL-WPVKNGELPERDQFSAEVQTLGS 813
V+ R +G G GIV + +AVKKL P +N +R E+ L
Sbjct: 22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRA--YRELVLLKC 79
Query: 814 IRHKNIVRLLGCCNNGRT-----RLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVA 868
+ HKNI+ LL +T + L + + +L ++H + LD + ++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHERMSYLLYQML 136
Query: 869 HGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
G+ +LH IIHRD+K +NI+V + DFGLA+
Sbjct: 137 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNFMMTPYVVTRY 190
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTG 959
Y APE + D++S G ++ E++ G
Sbjct: 191 YRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 34/209 (16%)
Query: 766 VGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH-KNIVRLL 823
+G+G V+ + I + + + VK L PVK +++ E++ L ++R NI+ L
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVK------KNKIKREIKILENLRGGPNIITLA 98
Query: 824 GCCNN--GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPP 881
+ RT L+F++++N L + D+D R+ + + L Y H
Sbjct: 99 DIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRF-YMYEILKALDYCHS---MG 151
Query: 882 IIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE------- 933
I+HRD+K +N+++ + L D+GLA+ + G PE
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQM 208
Query: 934 YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y YSL D++S G +L ++ KEP
Sbjct: 209 YDYSL------DMWSLGCMLASMIFRKEP 231
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 99/234 (42%), Gaps = 34/234 (14%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV I R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFD-YI----SNGSLAGLL-----HEKKVFLDWDSRYK 862
+ HKNI+ LL ++ D YI + +L+ ++ HE+ +L Y+
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL----LYQ 134
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
++ G+ H LH IIHRD+K +NI+V + DFGLA+
Sbjct: 135 MLCGIKH----LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTP 184
Query: 923 XXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITW 976
Y APE + E D++S G ++ E++ G P HI W
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 27/112 (24%)
Query: 85 LLSFSHLTSLVLSNANLTGEIPPAIGNLSSLINLDLSFNALTGNIPEEIGKLAXXXXXXX 144
+ + LT L L+ +LT E+P I NLS+L LDLS N LT
Sbjct: 243 IFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT------------------ 283
Query: 145 XXXXIHGGIPREIGNCSKLRRLELYDNQLSGNIPAEIGQLEALEIIRAGGNP 196
+P E+G+C +L+ +DN ++ +P E G L L+ + GNP
Sbjct: 284 -------SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNP 327
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 475 LTFLELSENQFTGEIPPEIGNCTQLEMVDLHQNKLQGTIPSSLEFLFGLNVLDLSMNSIG 534
LT L L+ N T E+P EI N + L ++DL N+L ++P+ L F L N +
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL-TSLPAELGSCFQLKYFYFFDNMV- 305
Query: 535 GTIPENLGKLTSLNKL-------------VLSKNNITGLI 561
T+P G L +L L +L++ ++TGLI
Sbjct: 306 TTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLI 345
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 225 QIPRSVGELTNLRTLSVYTANITGYIPEEIGNCSALENLFLYENQI 270
++P + L+NLR L + +T +P E+G+C L+ + ++N +
Sbjct: 261 ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMV 305
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 760 LSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNI 819
+S T I+G G G V++ E + + K+ +K + ++++ E+ + + H N+
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKI--IKTRGMKDKEEVKNEISVMNQLDHANL 148
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCV 879
++L + +L+ +Y+ G L + ++ L + + G+ ++H
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ--- 205
Query: 880 PPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYG 935
I+H D+K NIL Q + + DFGLA+ + ++APE
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIK--IIDFGLARRYKPREKLKVNFGTPE---FLAPEVV 260
Query: 936 YSLKITEKSDVYSYGVVLLEVLTGKEP 962
++ +D++S GV+ +L+G P
Sbjct: 261 NYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 70/171 (40%), Gaps = 24/171 (14%)
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
VA G+ +L IHRD+ + NIL+ + + DFGLA+
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 927 YGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERK 985
++APE + T +SDV+S+GV+L E+ + G P G I
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY-----PGVKI-----------D 309
Query: 986 REFTTILDRQLLMRS-GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAML 1035
EF L MR+ EM Q + L C + P +RPT ++ L
Sbjct: 310 EEFCRRLKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 357
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 24/178 (13%)
Query: 867 VAHGLAYL-HHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXX 925
VA G+ +L C IHRD+ + NIL+ + + DFGLA+
Sbjct: 200 VAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 926 XYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRER 984
++APE + T +SDV+S+GV+L E+ + G P D G R R
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMR 314
Query: 985 KREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
++TT EM Q + L C + P +RPT ++ L + N
Sbjct: 315 APDYTT--------------PEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQAN 355
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel
Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 24/178 (13%)
Query: 867 VAHGLAYL-HHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXX 925
VA G+ +L C IHRD+ + NIL+ + + DFGLA+
Sbjct: 202 VAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 926 XYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRER 984
++APE + T +SDV+S+GV+L E+ + G P D G R R
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMR 316
Query: 985 KREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAMLKEIRHEN 1042
++TT EM Q + L C + P +RPT ++ L + N
Sbjct: 317 APDYTT--------------PEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQAN 357
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 70/171 (40%), Gaps = 24/171 (14%)
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
VA G+ +L IHRD+ + NIL+ + + DFGLA+
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 927 YGYIAPEYGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAHIITWVNGELRERK 985
++APE + T +SDV+S+GV+L E+ + G P G I
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY-----PGVKI-----------D 307
Query: 986 REFTTILDRQLLMRS-GTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAML 1035
EF L MR+ EM Q + L C + P +RPT ++ L
Sbjct: 308 EEFCRRLKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 355
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 14/210 (6%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV I R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFD-YISNGSL-AGLLHEKKVFLDWDSRYKIILGVAHG 870
+ HKNI+ LL ++ D YI + A L ++ LD + ++ + G
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ +LH IIHRD+K +NI+V + DFGLA+ Y
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYYR 192
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
APE + E D++S G ++ E++ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 806 AEVQTLGSIRHKNIVRLLGCCNNGR-------------TRLLLFDYISNGSLAGLLHEKK 852
+EV L S+ H+ +VR R T + +Y N +L L+H +
Sbjct: 51 SEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN 110
Query: 853 VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK 909
+ D +++ + L+Y+H IIHR++K NI + + DFGLAK
Sbjct: 111 LNQQRDEYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 15/203 (7%)
Query: 766 VGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERD--QFSAEVQTLGSIRHKNIVRL 822
+GKG +V R V++ + Q A + +L RD + E + ++H NIVRL
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAM---IINTKKLSARDHQKLEREARICRLLKHPNIVRL 75
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+ L+FD ++ G L + ++ + + D+ + I + + + H V
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH-CIQQILEAVLHCHQMGV--- 131
Query: 883 IHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
+HR++K N+L+ + + LADFGLA GY++PE
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKDP 189
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
+ D+++ GV+L +L G P
Sbjct: 190 YGKPVDLWACGVILYILLVGYPP 212
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV I R V A+KKL P +N +R E+ +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKKLSRPFQNQTHAKRAY--RELVLMK 72
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFD-YISNGSL-AGLLHEKKVFLDWDSRYKIILGVAHG 870
+ HKNI+ LL ++ D YI + A L ++ LD + ++ + G
Sbjct: 73 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 132
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ +LH IIHRD+K +NI+V + DFGLA+ Y Y
Sbjct: 133 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YR 186
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
APE + E D++S G ++ E++ K
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 758 TRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T +S T+ VG G G + ++ S + +A+KKL E+ + + E+ L ++H
Sbjct: 43 TYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQH 100
Query: 817 KNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKI---ILGVAHGLAY 873
+N++ LL + +D+ +K + +++ S KI + + GL Y
Sbjct: 101 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEF-SEEKIQYLVYQMLKGLKY 159
Query: 874 LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE 933
+H V +HRD+K N+ V E + DFGLA+ Y APE
Sbjct: 160 IHSAGV---VHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPE 211
Query: 934 YGYS-LKITEKSDVYSYGVVLLEVLTGK 960
S + + D++S G ++ E+LTGK
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 766 VGKGVSGIVYRVE-IPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G+V ++ +PS Q++AVK++ N + +R ++ ++ ++ V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDI-SMRTVDCPFTVTFYG 117
Query: 825 CCNNGRTRLLLFDYISNG--SLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+ + + + +K + D KI + + L +LH +
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SV 175
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY-------- 934
IHRD+K +N+L+ + + DFG++ Y+APE
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP---YMAPERINPELNQK 232
Query: 935 GYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
GYS+ KSD++S G+ ++E+ + P DS
Sbjct: 233 GYSV----KSDIWSLGITMIELAILRFPYDS 259
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 14/210 (6%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV I R V A+KKL P +N +R E+ +
Sbjct: 27 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 83
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFD-YISNGSL-AGLLHEKKVFLDWDSRYKIILGVAHG 870
+ HKNI+ LL ++ D YI + A L ++ LD + ++ + G
Sbjct: 84 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 143
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ +LH IIHRD+K +NI+V + DFGLA+ Y
Sbjct: 144 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 197
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
APE + E D++S G ++ E++ K
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 20/210 (9%)
Query: 758 TRLSDTNIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
T +S T+ VG G G + ++ S + +A+KKL E+ + + E+ L ++H
Sbjct: 25 TYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQH 82
Query: 817 KNIVRLLGCCNNGRTRLLLFDY-----ISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGL 871
+N++ LL + +D+ L ++ K F + +Y ++ + GL
Sbjct: 83 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK--FSEEKIQY-LVYQMLKGL 139
Query: 872 AYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIA 931
Y+H ++HRD+K N+ V E + DFGLA+ Y A
Sbjct: 140 KYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRA 191
Query: 932 PEYGYS-LKITEKSDVYSYGVVLLEVLTGK 960
PE S + + D++S G ++ E+LTGK
Sbjct: 192 PEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 14/210 (6%)
Query: 756 VVTRLSDTNIVGKGVSGIVYRV--EIPSRQVIAVKKL-WPVKNGELPERDQFSAEVQTLG 812
V+ R + +G G GIV I R V A+KKL P +N +R E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV-AIKKLSRPFQNQTHAKRA--YRELVLMK 78
Query: 813 SIRHKNIVRLLGCCNNGRTRLLLFD-YISNGSL-AGLLHEKKVFLDWDSRYKIILGVAHG 870
+ HKNI+ LL ++ D YI + A L ++ LD + ++ + G
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 871 LAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
+ +LH IIHRD+K +NI+V + DFGLA+ Y
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYYR 192
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGK 960
APE + E D++S G ++ E++ K
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Query: 815 RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYL 874
+H NI+ L ++G+ L+ + + G L + +K F + ++ + ++ + + YL
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTIGKTVEYL 137
Query: 875 HHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
H V +HRD+K +NIL G + DFG AK ++
Sbjct: 138 HSQGV---VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA--NFV 192
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
APE E D++S G++L +L G P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 766 VGKGVSGIVYRVE-IPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G G+V ++ +PS Q++AVK++ N + +R ++ ++ ++ V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDI-SMRTVDCPFTVTFYG 73
Query: 825 CCNNGRTRLLLFDYISNG--SLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPI 882
+ + + + +K + D KI + + L +LH +
Sbjct: 74 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SV 131
Query: 883 IHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY-------- 934
IHRD+K +N+L+ + + DFG++ Y+APE
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP---YMAPERINPELNQK 188
Query: 935 GYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
GYS+ KSD++S G+ ++E+ + P DS
Sbjct: 189 GYSV----KSDIWSLGITMIELAILRFPYDS 215
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 815 RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYL 874
+H NI+ L ++G+ ++ + + G L + +K F + ++ ++ + + YL
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREAS-AVLFTITKTVEYL 132
Query: 875 HHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
H V +HRD+K +NIL G + DFG AK ++
Sbjct: 133 HAQGV---VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTA--NFV 187
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
APE D++S GV+L +LTG P
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 444 EIGGCTGLIRLRLGSNNFSGHIPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQLEMVD 503
++ T L RLG + G + L+ LT + S NQ T P + N T+L +
Sbjct: 39 DLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDIL 91
Query: 504 LHQNKLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNITGLIPX 563
++ N++ P L L L L L N I P L LT+LN+L LS N I+
Sbjct: 92 MNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS----- 142
Query: 564 XXXXXXXXXXXXXXXNRINGSIPEEIGRLQGLDIL--LNLSWNALTGPIPESFSNLSKLA 621
+I L GL L LN S N +T P +NL+ L
Sbjct: 143 ------------------------DISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLE 176
Query: 622 NLDLSNNMLTGSLKVLGSLDNLVSLNVSYNHFSGILPNTKLFHGLPASAFYGNQ 675
LD+S+N ++ + VL L NL SL + N S I P + L + GNQ
Sbjct: 177 RLDISSNKVSD-ISVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQ 228
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 17/219 (7%)
Query: 440 EIPPEIGGCTGLIRLRLGSNNFSGHIPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQL 499
+I P + T L+ + + +N + P + L LT L L NQ T +I P + N T L
Sbjct: 77 DITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQIT-DIDP-LKNLTNL 131
Query: 500 EMVDLHQNKLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNITG 559
++L N + S+L L L L+ S N + P L LT+L +L +S N ++
Sbjct: 132 NRLELSSNTISDI--SALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSD 187
Query: 560 LIPXXXXXXXXXXXXXXXXNRINGSIPEEIGRLQGLDILLNLSWNALTGPIPESFSNLSK 619
+ N+I+ P +G L LD LS N + ++L+
Sbjct: 188 I--SVLAKLTNLESLIATNNQISDITP--LGILTNLD---ELSLNGNQLKDIGTLASLTN 240
Query: 620 LANLDLSNNMLTGSLKVLGSLDNLVSLNVSYNHFSGILP 658
L +LDL+NN ++ L L L L L + N S I P
Sbjct: 241 LTDLDLANNQISN-LAPLSGLTKLTELKLGANQISNISP 278
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 118/300 (39%), Gaps = 27/300 (9%)
Query: 765 IVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSI-RHKNIVRL 822
+VG G G VY+ + + Q+ A+K V + E ++ E+ L H+NI
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIK----VMDVTGDEEEEIKQEINMLKKYSHHRNIATY 86
Query: 823 LGCC------NNGRTRLLLFDYISNGSLAGLLHEKK---VFLDWDSRYKIILGVAHGLAY 873
G L+ ++ GS+ L+ K + +W + I + GL++
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSH 144
Query: 874 LHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXY---GYI 930
LH V IHRDIK N+L+ E L DFG++ + I
Sbjct: 145 LHQHKV---IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 201
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTT 990
A + KSD++S G+ +E+ G P P A + N R + ++++
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSK 261
Query: 991 ILD---RQLLMRSGTQIQEMLQVLGVALLCVNPCPEE-RPTMKDVTAMLKEIRHENDDLE 1046
L+++ +Q Q++ + P + R +KD K+ R E D+ E
Sbjct: 262 KFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHIDRTKKKRGEKDETE 321
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 17/220 (7%)
Query: 758 TRLSDTN---IVGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGELPERDQFS---AEVQT 810
+L+D N ++GKG G V + + ++ A+K L K + + D E +
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKIL---KKDVVIQDDDVECTMVEKRV 72
Query: 811 LGSIRHKNIVRLLGCCNNGRTRL-LLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAH 869
L + + L C RL + +Y++ G L + + F + + + ++
Sbjct: 73 LALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF-YAAEISI 131
Query: 870 GLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGY 929
GL +LH II+RD+K +N+++ + +ADFG+ K Y
Sbjct: 132 GLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDY 186
Query: 930 IAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPD 969
IAPE + D ++YGV+L E+L G+ P D D
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 226
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 870 GLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGY 929
GL +LH I++RD+K +NIL+ +ADFG+ K Y
Sbjct: 130 GLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTPDY 184
Query: 930 IAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
IAPE K D +S+GV+L E+L G+ P
Sbjct: 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 870 GLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGY 929
GL +LH I++RD+K +NIL+ +ADFG+ K Y
Sbjct: 131 GLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGTPDY 185
Query: 930 IAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
IAPE K D +S+GV+L E+L G+ P
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 79/211 (37%), Gaps = 23/211 (10%)
Query: 763 TNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQ---FSAEVQTLGSIRHKNI 819
++G+G G V V + Q + KL + E+ +R F E + +
Sbjct: 80 VKVIGRGAFGEVQLVRHKASQKVYAMKL--LSKFEMIKRSDSAFFWEERDIMAFANSPWV 137
Query: 820 VRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYK----IILGVAHGLAYLH 875
V+L + + ++ +Y+ G L L+ V W Y + L H +
Sbjct: 138 VQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMG--- 194
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY- 934
+IHRD+K +N+L+ LADFG + YI+PE
Sbjct: 195 ------LIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGMVHCDTAVGTPDYISPEVL 247
Query: 935 ---GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
G + D +S GV L E+L G P
Sbjct: 248 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 14/205 (6%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R+ EV L I+H N++ L N +L+ + ++ G L L EK+ + ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + +G+ YLH I H D+K NI++ P+ + DFGLA
Sbjct: 118 -EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 917 XXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPT--DSRIPDGAHII 974
++APE + ++D++S GV+ +L+G P D++ A+ +
Sbjct: 174 FKNIFGTP---AFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-V 229
Query: 975 TWVNGELRERKREFTTILDRQLLMR 999
+ VN E + T+ L + + R
Sbjct: 230 SAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 14/205 (6%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R+ EV L I+H N++ L N +L+ + ++ G L L EK+ + ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + +G+ YLH I H D+K NI++ P+ + DFGLA
Sbjct: 118 -EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 917 XXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP--TDSRIPDGAHII 974
++APE + ++D++S GV+ +L+G P D++ A+ +
Sbjct: 174 FKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-V 229
Query: 975 TWVNGELRERKREFTTILDRQLLMR 999
+ VN E + T+ L + + R
Sbjct: 230 SAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R+ EV L I+H N++ L N +L+ + ++ G L L EK+ + ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + +G+ YLH I H D+K NI++ P+ + DFGLA
Sbjct: 118 -EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------K 167
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPT--DSRIPDGA 971
+G ++APE + ++D++S GV+ +L+G P D++ A
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 972 HIITWVNGELRERKREFTTILDRQLLMR 999
+ ++ VN E + T+ L + + R
Sbjct: 228 N-VSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R+ EV L I+H N++ L N +L+ + ++ G L L EK+ + ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + +G+ YLH I H D+K NI++ P+ + DFGLA
Sbjct: 118 -EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------K 167
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPT--DSRIPDGA 971
+G ++APE + ++D++S GV+ +L+G P D++ A
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 972 HIITWVNGELRERKREFTTILDRQLLMR 999
+ ++ VN E + T+ L + + R
Sbjct: 228 N-VSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 91/226 (40%), Gaps = 25/226 (11%)
Query: 746 FQKLNFSVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQV---IAVKKLWPVKNGELPERD 802
+ +++ + V + +G+G G V+R+E +Q AVKK+ +
Sbjct: 81 LKPVDYEYREEVHWATHQLRLGRGSFGEVHRME--DKQTGFQCAVKKV---------RLE 129
Query: 803 QFSAE-VQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY 861
F AE + + IV L G G + + + GSL L+ E+ + R
Sbjct: 130 VFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE--DRA 187
Query: 862 KIILGVA-HGLAYLHHDCVPPIIHRDIKSNNILVGPQ-FEAFLADFGLAKLFXXXXXXXX 919
LG A GL YLH I+H D+K++N+L+ A L DFG A
Sbjct: 188 LYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKS 244
Query: 920 XXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
G ++APE K DV+S ++L +L G P
Sbjct: 245 LLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R+ EV L I+H N++ L N +L+ + ++ G L L EK+ + ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + +G+ YLH I H D+K NI++ P+ + DFGLA
Sbjct: 118 -EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------K 167
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPT--DSRIPDGA 971
+G ++APE + ++D++S GV+ +L+G P D++ A
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 972 HIITWVNGELRERKREFTTILDRQLLMR 999
+ ++ VN E + T+ L + + R
Sbjct: 228 N-VSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Query: 815 RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYL 874
+H NI+ L ++G+ L+ + + G L + +K F + ++ + ++ + + YL
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTIGKTVEYL 137
Query: 875 HHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
H V +HRD+K +NIL G + DFG AK ++
Sbjct: 138 HSQGV---VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA--NFV 192
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
APE E D++S G++L +L G P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R+ EV L I+H N++ L N +L+ + ++ G L L EK+ + ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + +G+ YLH I H D+K NI++ P+ + DFGLA
Sbjct: 118 -EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------K 167
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPT--DSRIPDGA 971
+G ++APE + ++D++S GV+ +L+G P D++ A
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 972 HIITWVNGELRERKREFTTILDRQLLMR 999
+ ++ VN E + T+ L + + R
Sbjct: 228 N-VSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 63/241 (26%), Positives = 98/241 (40%), Gaps = 46/241 (19%)
Query: 744 TPFQKLNFSVDDVVTRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERD 802
+P Q +F+ +D L D +G+G G V + V PS Q++AVK++ + E++
Sbjct: 12 SPEQHWDFTAED----LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI----RSTVDEKE 63
Query: 803 QFSAEVQTLGSIRHKN---IVRLLG----------CCNNGRTRLLLFDYISNGSLAGLLH 849
Q + +R + IV+ G C T F L ++
Sbjct: 64 QKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIP 123
Query: 850 EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK 909
E+ + KI L L +L + IIHRDIK +NIL+ L DFG++
Sbjct: 124 EEIL-------GKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISG 174
Query: 910 LFXXXXXXXXXXXXXXXYGYIAPE--------YGYSLKITEKSDVYSYGVVLLEVLTGKE 961
Y+APE GY + +SDV+S G+ L E+ TG+
Sbjct: 175 QLVDSIAKTRDAGCRP---YMAPERIDPSASRQGYDV----RSDVWSLGITLYELATGRF 227
Query: 962 P 962
P
Sbjct: 228 P 228
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R+ EV L I+H N++ L N +L+ + ++ G L L EK+ + ++
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + +G+ YLH I H D+K NI++ P+ + DFGLA
Sbjct: 117 -EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------K 166
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPT--DSRIPDGA 971
+G ++APE + ++D++S GV+ +L+G P D++ A
Sbjct: 167 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 226
Query: 972 HIITWVNGELRERKREFTTILDRQLLMR 999
+ ++ VN E + T+ L + + R
Sbjct: 227 N-VSAVNYEFEDEYFSNTSALAKDFIRR 253
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R+ EV L I+H N++ L N +L+ + ++ G L L EK+ + ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + +G+ YLH I H D+K NI++ P+ + DFGLA
Sbjct: 118 -EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------K 167
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPT--DSRIPDGA 971
+G ++APE + ++D++S GV+ +L+G P D++ A
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 972 HIITWVNGELRERKREFTTILDRQLLMR 999
+ ++ VN E + T+ L + + R
Sbjct: 228 N-VSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R+ EV L I+H N++ L N +L+ + ++ G L L EK+ + ++
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + +G+ YLH I H D+K NI++ P+ + DFGLA
Sbjct: 117 -EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------K 166
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPT--DSRIPDGA 971
+G ++APE + ++D++S GV+ +L+G P D++ A
Sbjct: 167 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 226
Query: 972 HIITWVNGELRERKREFTTILDRQLLMR 999
+ ++ VN E + T+ L + + R
Sbjct: 227 N-VSAVNYEFEDEYFSNTSALAKDFIRR 253
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R+ EV L I+H N++ L N +L+ + ++ G L L EK+ + ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + +G+ YLH I H D+K NI++ P+ + DFGLA
Sbjct: 118 -EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------K 167
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPT--DSRIPDGA 971
+G ++APE + ++D++S GV+ +L+G P D++ A
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 972 HIITWVNGELRERKREFTTILDRQLLMR 999
+ ++ VN E + T+ L + + R
Sbjct: 228 N-VSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 834 LLFDYISNGSLAGLLHEKKVFLDWDSRY---KIILGVAHGLAYLHHDCVPPIIHRDIKSN 890
+ D ++ G L L + VF + D R+ +IILG+ H +H+ V ++RD+K
Sbjct: 268 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH----MHNRFV---VYRDLKPA 320
Query: 891 NILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY-GYSLKITEKSDVYSY 949
NIL+ ++D GLA F +GY+APE + +D +S
Sbjct: 321 NILLDEHGHVRISDLGLACDF----SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 376
Query: 950 GVVLLEVLTGKEPTDSRIPDGAHII 974
G +L ++L G P H I
Sbjct: 377 GCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 834 LLFDYISNGSLAGLLHEKKVFLDWDSRY---KIILGVAHGLAYLHHDCVPPIIHRDIKSN 890
+ D ++ G L L + VF + D R+ +IILG+ H +H+ V ++RD+K
Sbjct: 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH----MHNRFV---VYRDLKPA 321
Query: 891 NILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY-GYSLKITEKSDVYSY 949
NIL+ ++D GLA F +GY+APE + +D +S
Sbjct: 322 NILLDEHGHVRISDLGLACDF----SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 950 GVVLLEVLTGKEPTDSRIPDGAHII 974
G +L ++L G P H I
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 18/169 (10%)
Query: 807 EVQTLGSIRHKNIVRL--LGCCNNGRTRLLLFDYISNG-------SLAGLLHEKKVFLDW 857
E+ L ++H N++ L + + R LLFDY + A ++K V L
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 858 DSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV---GPQF-EAFLADFGLAKLFXX 913
++ + G+ YLH + V +HRD+K NILV GP+ +AD G A+LF
Sbjct: 128 GMVKSLLYQILDGIHYLHANWV---LHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 914 -XXXXXXXXXXXXXYGYIAPEYGYSLK-ITEKSDVYSYGVVLLEVLTGK 960
+ Y APE + T+ D+++ G + E+LT +
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R+ EV L I+H N++ L N +L+ + ++ G L L EK+ + ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + +G+ YLH I H D+K NI++ P+ + DFGLA
Sbjct: 118 -EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------K 167
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPT--DSRIPDGA 971
+G ++APE + ++D++S GV+ +L+G P D++ A
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 972 HIITWVNGELRERKREFTTILDRQLLMR 999
+ ++ VN E + T+ L + + R
Sbjct: 228 N-VSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R+ EV L I+H N++ L N +L+ + ++ G L L EK+ + ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + +G+ YLH I H D+K NI++ P+ + DFGLA
Sbjct: 118 -EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------K 167
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPT--DSRIPDGA 971
+G ++APE + ++D++S GV+ +L+G P D++ A
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 972 HIITWVNGELRERKREFTTILDRQLLMR 999
+ ++ VN E + T+ L + + R
Sbjct: 228 N-VSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 97/251 (38%), Gaps = 63/251 (25%)
Query: 766 VGKGVSGIV-YRVEIPSRQVIAVKKLWPVKNGELPERD--QFSAEVQTLGSIRHKNIVRL 822
+G+G G+V +E +R + A+K + K ++ +D + EV+ + + H NI RL
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 823 -------------LGCCNNGR--TRLLLFDYISNGSLA--------------------GL 847
+ C+ G +L +F S G A G
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 848 LHEKKVFLDWDSRYKIILGVAH----GLAYLHHDCVPPIIHRDIKSNNIL--VGPQFEAF 901
+H + LD+ R K+I + L YLH+ I HRDIK N L FE
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIK 210
Query: 902 LADFGLAKLFXXXXXXXXXXXXXXXYG--YIAPE--------YGYSLKITEKSDVYSYGV 951
L DFGL+K F ++APE YG K D +S GV
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYG------PKCDAWSAGV 264
Query: 952 VLLEVLTGKEP 962
+L +L G P
Sbjct: 265 LLHLLLMGAVP 275
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 834 LLFDYISNGSLAGLLHEKKVFLDWDSRY---KIILGVAHGLAYLHHDCVPPIIHRDIKSN 890
+ D ++ G L L + VF + D R+ +IILG+ H +H+ V ++RD+K
Sbjct: 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH----MHNRFV---VYRDLKPA 321
Query: 891 NILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY-GYSLKITEKSDVYSY 949
NIL+ ++D GLA F +GY+APE + +D +S
Sbjct: 322 NILLDEHGHVRISDLGLACDF----SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 950 GVVLLEVLTGKEPTDSRIPDGAHII 974
G +L ++L G P H I
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 834 LLFDYISNGSLAGLLHEKKVFLDWDSRY---KIILGVAHGLAYLHHDCVPPIIHRDIKSN 890
+ D ++ G L L + VF + D R+ +IILG+ H +H+ V ++RD+K
Sbjct: 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH----MHNRFV---VYRDLKPA 321
Query: 891 NILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY-GYSLKITEKSDVYSY 949
NIL+ ++D GLA F +GY+APE + +D +S
Sbjct: 322 NILLDEHGHVRISDLGLACDF----SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 950 GVVLLEVLTGKEPTDSRIPDGAHII 974
G +L ++L G P H I
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 56/271 (20%), Positives = 110/271 (40%), Gaps = 28/271 (10%)
Query: 766 VGKGVSGIVYRVEIPSRQV-IAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G+G VYR V +A+KK+ + R E+ L + H N+++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLH---EKKVFLDWDSRYKIILGVAHGLAYLHHDCVPP 881
++ + G L+ ++ ++K + + +K + + L ++H
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---R 156
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
++HRDIK N+ + L D GL + F Y++PE +
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY--YMSPERIHENGYN 214
Query: 942 EKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKREFTTILDRQLLMRSG 1001
KSD++S G +L E+ + P D ++ + + + ++ + S
Sbjct: 215 FKSDIWSLGCLLYEMAALQSPFYG---DKMNLYSLCK---KIEQCDYPP-------LPSD 261
Query: 1002 TQIQEMLQVLGVALLCVNPCPEERPTMKDVT 1032
+E+ Q++ +C+NP PE+RP DVT
Sbjct: 262 HYSEELRQLVN---MCINPDPEKRP---DVT 286
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 444 EIGGCTGLIRLRLGSNNFSGHIPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQLEMVD 503
++ T L RLG + G + L+ LT + S NQ T P + N T+L +
Sbjct: 39 DLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDIL 91
Query: 504 LHQNKLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNITGLIPX 563
++ N++ P L L L L L N I P L LT+LN+L LS N I+
Sbjct: 92 MNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS----- 142
Query: 564 XXXXXXXXXXXXXXXNRINGSIPEEIGRLQGLDILLNLSW--NALTGPIPESFSNLSKLA 621
+I L GL L LS+ N +T P +NL+ L
Sbjct: 143 ------------------------DISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLE 176
Query: 622 NLDLSNNMLTGSLKVLGSLDNLVSLNVSYNHFSGILPNTKLFHGLPASAFYGNQ 675
LD+S+N ++ + VL L NL SL + N S I P + L + GNQ
Sbjct: 177 RLDISSNKVSD-ISVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQ 228
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 17/219 (7%)
Query: 440 EIPPEIGGCTGLIRLRLGSNNFSGHIPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQL 499
+I P + T L+ + + +N + P + L LT L L NQ T +I P + N T L
Sbjct: 77 DITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQIT-DIDP-LKNLTNL 131
Query: 500 EMVDLHQNKLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNITG 559
++L N + S+L L L L S N + P L LT+L +L +S N ++
Sbjct: 132 NRLELSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSD 187
Query: 560 LIPXXXXXXXXXXXXXXXXNRINGSIPEEIGRLQGLDILLNLSWNALTGPIPESFSNLSK 619
+ N+I+ P +G L LD LS N + ++L+
Sbjct: 188 I--SVLAKLTNLESLIATNNQISDITP--LGILTNLD---ELSLNGNQLKDIGTLASLTN 240
Query: 620 LANLDLSNNMLTGSLKVLGSLDNLVSLNVSYNHFSGILP 658
L +LDL+NN ++ L L L L L + N S I P
Sbjct: 241 LTDLDLANNQISN-LAPLSGLTKLTELKLGANQISNISP 278
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++ EV L + H N++ L N +L+ + +S G L L +K+ L +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEA 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
I + G+ YLH I H D+K NI++ P L DFGLA
Sbjct: 118 TSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH------E 168
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+G ++APE + ++D++S GV+ +L+G P
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 815 RHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYL 874
+H NI+ L ++G+ ++ + G L + +K F + ++ ++ + + YL
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREAS-AVLFTITKTVEYL 132
Query: 875 HHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYI 930
H V +HRD+K +NIL G + DFG AK ++
Sbjct: 133 HAQGV---VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTA--NFV 187
Query: 931 APEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
APE D++S GV+L LTG P
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 9/164 (5%)
Query: 803 QFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYK 862
+ E+ L +RH +I++L + +++ +Y N ++ K+ R+
Sbjct: 50 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF- 108
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
+ + Y H I+HRD+K N+L+ +ADFGL+ +
Sbjct: 109 -FQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG 164
Query: 923 XXXXYGYIAPEY-GYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
Y APE L + DV+S GV+L +L + P D
Sbjct: 165 SP---NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 444 EIGGCTGLIRLRLGSNNFSGHIPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQLEMVD 503
++ T L RLG + G + L+ LT + S NQ T P + N T+L +
Sbjct: 39 DLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDIL 91
Query: 504 LHQNKLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNITGLIPX 563
++ N++ P L L L L L N I P L LT+LN+L LS N I+
Sbjct: 92 MNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS----- 142
Query: 564 XXXXXXXXXXXXXXXNRINGSIPEEIGRLQGLDILLNLSW--NALTGPIPESFSNLSKLA 621
+I L GL L LS+ N +T P +NL+ L
Sbjct: 143 ------------------------DISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLE 176
Query: 622 NLDLSNNMLTGSLKVLGSLDNLVSLNVSYNHFSGILPNTKLFHGLPASAFYGNQ 675
LD+S+N ++ + VL L NL SL + N S I P + L + GNQ
Sbjct: 177 RLDISSNKVSD-ISVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQ 228
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 115/308 (37%), Gaps = 93/308 (30%)
Query: 353 FSRLKQLELDNNRFFGQIPPTIGQLKELLLFFAWQNQLHGNIPELAYCVKLQALDLSHNF 412
+ L Q+ NN+ P + L +L+ NQ+ +I LA L L L +N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQI-ADITPLANLTNLTGLTLFNNQ 118
Query: 413 LTGSVPSSXXXXXXXXXXXXXXXRFSGEIPPEIGGCTGLIRLRLGSNNFSGHIPSRIGL- 471
+T +I P + T L RL L SN S I + GL
Sbjct: 119 IT-------------------------DIDP-LKNLTNLNRLELSSNTIS-DISALSGLT 151
Query: 472 -LHRLTFLELSENQFTGEIPPEIGNCTQLEMVDLHQNKLQGTIPSSLEFLFGLNVLDLSM 530
L +L+F S NQ T P + N T LE +D+ NK V D+S+
Sbjct: 152 SLQQLSF---SSNQVTDLKP--LANLTTLERLDISSNK----------------VSDISV 190
Query: 531 NSIGGTIPENLGKLTSLNKLVLSKNNITGLIPXXXXXXXXXXXXXXXXNRINGSIPEEIG 590
L KLT+L L+ + N I+ + P +NG+ ++IG
Sbjct: 191 ----------LAKLTNLESLIATNNQISDITPLGILTNLDEL-------SLNGNQLKDIG 233
Query: 591 RLQGLDILLNLSWNALTGPIPESFSNLSKLANLDLSNNMLTGSLKVLGSLDNLVSLNVSY 650
L ++L+ L +LDL+NN ++ L L L L L +
Sbjct: 234 TL----------------------ASLTNLTDLDLANNQISN-LAPLSGLTKLTELKLGA 270
Query: 651 NHFSGILP 658
N S I P
Sbjct: 271 NQISNISP 278
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 9/164 (5%)
Query: 803 QFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYK 862
+ E+ L +RH +I++L + +++ +Y N ++ K+ R+
Sbjct: 60 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF- 118
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
+ + Y H I+HRD+K N+L+ +ADFGL+ +
Sbjct: 119 -FQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG 174
Query: 923 XXXXYGYIAPEY-GYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
Y APE L + DV+S GV+L +L + P D
Sbjct: 175 SP---NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++ EV L + H N++ L N +L+ + +S G L L +K+ L +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEA 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
I + G+ YLH I H D+K NI++ P L DFGLA
Sbjct: 118 TSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH------E 168
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+G ++APE + ++D++S GV+ +L+G P
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++ EV L + H N++ L N +L+ + +S G L L +K+ L +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEA 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
I + G+ YLH I H D+K NI++ P L DFGLA
Sbjct: 118 TSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH------E 168
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+G ++APE + ++D++S GV+ +L+G P
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 9/164 (5%)
Query: 803 QFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYK 862
+ E+ L +RH +I++L + +++ +Y N ++ K+ R+
Sbjct: 54 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF- 112
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
+ + Y H I+HRD+K N+L+ +ADFGL+ +
Sbjct: 113 -FQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG 168
Query: 923 XXXXYGYIAPEY-GYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
Y APE L + DV+S GV+L +L + P D
Sbjct: 169 SP---NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++ EV L + H N++ L N +L+ + +S G L L +K+ L +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEA 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
I + G+ YLH I H D+K NI++ P L DFGLA
Sbjct: 118 TSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH------E 168
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+G ++APE + ++D++S GV+ +L+G P
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++ EV L + H N++ L N +L+ + +S G L L +K+ L +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEA 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
I + G+ YLH I H D+K NI++ P L DFGLA
Sbjct: 118 TSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH------E 168
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+G ++APE + ++D++S GV+ +L+G P
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R++ EV L + H NI+ L N +L+ + +S G L L +K+ L +
Sbjct: 59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEA 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
I + G+ YLH I H D+K NI++ P L DFGLA
Sbjct: 118 TSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH------E 168
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
+G ++APE + ++D++S GV+ +L+G P
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 9/164 (5%)
Query: 803 QFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYK 862
+ E+ L +RH +I++L + +++ +Y N ++ K+ R+
Sbjct: 59 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF- 117
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
+ + Y H I+HRD+K N+L+ +ADFGL+ +
Sbjct: 118 -FQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG 173
Query: 923 XXXXYGYIAPEY-GYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
Y APE L + DV+S GV+L +L + P D
Sbjct: 174 SP---NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 801 RDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSR 860
R+ EV L I+H N++ L N +L+ + ++ G L L EK+ + ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEAT 117
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILV----GPQFEAFLADFGLAKLFXXXXX 916
+ + + +G+ YLH I H D+K NI++ P+ + DFGLA
Sbjct: 118 -EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH------K 167
Query: 917 XXXXXXXXXXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPT--DSRIPDGA 971
+G ++APE + ++D++S GV+ +L+G P D++ A
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 972 HIITWVNGELRERKREFTTILDRQLLMR 999
+ ++ VN E + T+ L + + R
Sbjct: 228 N-VSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 81/206 (39%), Gaps = 17/206 (8%)
Query: 764 NIVGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRL 822
+++G+G G+V P+ +++A+KK+ P R E++ L +H+NI+ +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHENIITI 74
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
YI + LH L D I + LH V
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNV- 133
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX--------XXXXXXXYGYIAP 932
IHRD+K +N+L+ + + DFGLA++ Y AP
Sbjct: 134 --IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAP 191
Query: 933 EYGY-SLKITEKSDVYSYGVVLLEVL 957
E S K + DV+S G +L E+
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 80/206 (38%), Gaps = 17/206 (8%)
Query: 764 NIVGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRL 822
+++G+G G+V P+ +++A+KK+ P R E++ L +H+NI+ +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHENIITI 74
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
YI + LH L D I + LH V
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNV- 133
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX--------XXXXXXXYGYIAP 932
IHRD+K +N+L+ + + DFGLA++ Y AP
Sbjct: 134 --IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAP 191
Query: 933 EYGY-SLKITEKSDVYSYGVVLLEVL 957
E S K + DV+S G +L E+
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 21/164 (12%)
Query: 802 DQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY 861
D F E+Q + I+++ + G N ++++Y+ N S+ L + F D Y
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI---LKFDEYFFVLDKNY 144
Query: 862 K----------IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLF 911
II V + +Y+H++ I HRD+K +NIL+ L+DFG ++
Sbjct: 145 TCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYM 202
Query: 912 XXXXXXXXXXXXXXXYGYIAPEY--GYSLKITEKSDVYSYGVVL 953
Y ++ PE+ S K D++S G+ L
Sbjct: 203 ----VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 26/155 (16%)
Query: 818 NIVRLLGCCNN--GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
NI++L+ + +T L+F+YI+N L ++ D+D R+ + + L Y H
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLY---QILTDFDIRF-YMYELLKALDYCH 149
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE- 933
I+HRD+K +N+++ Q + L D+GLA+ + G PE
Sbjct: 150 SK---GIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG---PEL 203
Query: 934 ------YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y YSL D++S G +L ++ +EP
Sbjct: 204 LVDYQMYDYSL------DMWSLGCMLASMIFRREP 232
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 26/155 (16%)
Query: 818 NIVRLLGCCNN--GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
NI++L+ + +T L+F+YI+N L ++ D+D R+ + + L Y H
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLY---QILTDFDIRF-YMYELLKALDYCH 154
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE- 933
I+HRD+K +N+++ Q + L D+GLA+ + G PE
Sbjct: 155 SK---GIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG---PEL 208
Query: 934 ------YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y YSL D++S G +L ++ +EP
Sbjct: 209 LVDYQMYDYSL------DMWSLGCMLASMIFRREP 237
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 18/218 (8%)
Query: 755 DVVTRLSDTNIVGKGVSGIV--YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLG 812
DV +G G G+V R + +QV A+KK+ P + + E++ L
Sbjct: 52 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQV-AIKKI-PNAFDVVTNAKRTLRELKILK 109
Query: 813 SIRHKNIVRLLGCCN------NGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
+H NI+ + ++ ++ D + + L ++H + RY +
Sbjct: 110 HFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRY-FLYQ 167
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK--LFXXXXXXXXXXXXX 924
+ GL Y+H V IHRD+K +N+LV E + DFG+A+
Sbjct: 168 LLRGLKYMHSAQV---IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 224
Query: 925 XXYGYIAPEYGYSL-KITEKSDVYSYGVVLLEVLTGKE 961
Y APE SL + T+ D++S G + E+L ++
Sbjct: 225 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 80/206 (38%), Gaps = 17/206 (8%)
Query: 764 NIVGKGVSGIVYRV-EIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRL 822
+++G+G G+V P+ +++A+KK+ P R E++ L +H+NI+ +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHENIITI 74
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHE--KKVFLDWDSRYKIILGVAHGLAYLHHDCVP 880
YI + LH L D I + LH V
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNV- 133
Query: 881 PIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXX--------XXXXXXXYGYIAP 932
IHRD+K +N+L+ + + DFGLA++ Y AP
Sbjct: 134 --IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAP 191
Query: 933 EYGY-SLKITEKSDVYSYGVVLLEVL 957
E S K + DV+S G +L E+
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 18/218 (8%)
Query: 755 DVVTRLSDTNIVGKGVSGIV--YRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLG 812
DV +G G G+V R + +QV A+KK+ P + + E++ L
Sbjct: 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQV-AIKKI-PNAFDVVTNAKRTLRELKILK 108
Query: 813 SIRHKNIVRLLGCCN------NGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
+H NI+ + ++ ++ D + + L ++H + RY +
Sbjct: 109 HFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRY-FLYQ 166
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAK--LFXXXXXXXXXXXXX 924
+ GL Y+H V IHRD+K +N+LV E + DFG+A+
Sbjct: 167 LLRGLKYMHSAQV---IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 223
Query: 925 XXYGYIAPEYGYSL-KITEKSDVYSYGVVLLEVLTGKE 961
Y APE SL + T+ D++S G + E+L ++
Sbjct: 224 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 26/155 (16%)
Query: 818 NIVRLLGCCNN--GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
NIV+LL + +T L+F+Y++N L D+D RY I + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRY-YIYELLKALDYCH 142
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE- 933
I+HRD+K +N+++ + L D+GLA+ + G PE
Sbjct: 143 SQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG---PEL 196
Query: 934 ------YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y YSL D++S G + ++ KEP
Sbjct: 197 LVDLQDYDYSL------DMWSLGCMFAGMIFRKEP 225
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 26/155 (16%)
Query: 818 NIVRLLGCCNN--GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
NIV+LL + +T L+F+Y++N L D+D RY I + L Y H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRY-YIYELLKALDYCH 143
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE- 933
I+HRD+K +N+++ + L D+GLA+ + G PE
Sbjct: 144 SQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG---PEL 197
Query: 934 ------YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y YSL D++S G + ++ KEP
Sbjct: 198 LVDLQDYDYSL------DMWSLGCMFAGMIFRKEP 226
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 26/155 (16%)
Query: 818 NIVRLLGCCNN--GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
NIV+LL + +T L+F+Y++N L D+D RY I + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRY-YIYELLKALDYCH 142
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE- 933
I+HRD+K +N+++ + L D+GLA+ + G PE
Sbjct: 143 SQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG---PEL 196
Query: 934 ------YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y YSL D++S G + ++ KEP
Sbjct: 197 LVDLQDYDYSL------DMWSLGCMFAGMIFRKEP 225
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 26/155 (16%)
Query: 818 NIVRLLGCCNN--GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
NIV+LL + +T L+F+Y++N L D+D RY I + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRY-YIYELLKALDYCH 142
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE- 933
I+HRD+K +N+++ + L D+GLA+ + G PE
Sbjct: 143 SQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG---PEL 196
Query: 934 ------YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y YSL D++S G + ++ KEP
Sbjct: 197 LVDLQDYDYSL------DMWSLGCMFAGMIFRKEP 225
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 26/155 (16%)
Query: 818 NIVRLLGCCNN--GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
NIV+LL + +T L+F+Y++N L D+D RY I + L Y H
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRY-YIYELLKALDYCH 144
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE- 933
I+HRD+K +N+++ + L D+GLA+ + G PE
Sbjct: 145 SQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG---PEL 198
Query: 934 ------YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y YSL D++S G + ++ KEP
Sbjct: 199 LVDLQDYDYSL------DMWSLGCMFAGMIFRKEP 227
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 26/155 (16%)
Query: 818 NIVRLLGCCNN--GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
NIV+LL + +T L+F+Y++N L D+D RY I + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRY-YIYELLKALDYCH 142
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE- 933
I+HRD+K +N+++ + L D+GLA+ + G PE
Sbjct: 143 SQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG---PEL 196
Query: 934 ------YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y YSL D++S G + ++ KEP
Sbjct: 197 LVDLQDYDYSL------DMWSLGCMFAGMIFRKEP 225
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 26/155 (16%)
Query: 818 NIVRLLGCCNN--GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
NIV+LL + +T L+F+Y++N L D+D RY I + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRY-YIYELLKALDYCH 142
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE- 933
I+HRD+K +N+++ + L D+GLA+ + G PE
Sbjct: 143 SQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG---PEL 196
Query: 934 ------YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y YSL D++S G + ++ KEP
Sbjct: 197 LVDLQDYDYSL------DMWSLGCMFAGMIFRKEP 225
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 26/155 (16%)
Query: 818 NIVRLLGCCNN--GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
NIV+LL + +T L+F+Y++N L D+D RY I + L Y H
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRY-YIYELLKALDYCH 163
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE- 933
I+HRD+K +N+++ + L D+GLA+ + G PE
Sbjct: 164 SQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG---PEL 217
Query: 934 ------YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y YSL D++S G + ++ KEP
Sbjct: 218 LVDLQDYDYSL------DMWSLGCMFAGMIFRKEP 246
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 26/155 (16%)
Query: 818 NIVRLLGCCNN--GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
NIV+LL + +T L+F+Y++N L D+D RY I + L Y H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRY-YIYELLKALDYCH 143
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE- 933
I+HRD+K +N+++ + L D+GLA+ + G PE
Sbjct: 144 SQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG---PEL 197
Query: 934 ------YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y YSL D++S G + ++ KEP
Sbjct: 198 LVDLQDYDYSL------DMWSLGCMFAGMIFRKEP 226
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 26/155 (16%)
Query: 818 NIVRLLGCCNN--GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH 875
NIV+LL + +T L+F+Y++N L D+D RY I + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRY-YIYELLKALDYCH 142
Query: 876 HDCVPPIIHRDIKSNNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE- 933
I+HRD+K +N+++ + L D+GLA+ + G PE
Sbjct: 143 SQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG---PEL 196
Query: 934 ------YGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y YSL D++S G + ++ KEP
Sbjct: 197 LVDLQDYDYSL------DMWSLGCMFAGMIFRKEP 225
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 40/258 (15%)
Query: 765 IVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELP--ERDQFSAEVQTLGSIRHKNIVR 821
++GKG +V R + + Q AVK + K P + E ++H +IV
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 822 LLGCCNNGRTRLLLFDYISNGSL---------AGLLHEKKVFLDWDSRYKIILGVAHGLA 872
LL ++ ++F+++ L AG ++ + V S Y + + L
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV----ASHY--MRQILEALR 144
Query: 873 YLHHDCVPPIIHRDIKSNNILVGPQFEAF---LADFGLAKLFXXXXXXXXXXXXXXXYGY 929
Y H + IIHRD+K N+L+ + + L DFG+A +
Sbjct: 145 YCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPHF 199
Query: 930 IAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP---TDSRIPDGAHIITWVNGELRERKR 986
+APE + DV+ GV+L +L+G P T R+ +G + G+ + R
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGI-----IKGKYKMNPR 254
Query: 987 EFTTI------LDRQLLM 998
+++ I L R++LM
Sbjct: 255 QWSHISESAKDLVRRMLM 272
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 12/199 (6%)
Query: 769 GVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCCNN 828
G + + I + +++A+K + KN + + E++ L ++RH++I +L
Sbjct: 22 GFAKVKLACHILTGEMVAIKIM--DKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET 79
Query: 829 GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIK 888
++ +Y G L + + + ++R + + +AY+H HRD+K
Sbjct: 80 ANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQGYA---HRDLK 135
Query: 889 SNNILVGPQFEAFLADFGL-AKLFXXXXXXXXXXXXXXXYGYIAPEY--GYSLKITEKSD 945
N+L + L DFGL AK Y APE G S + ++D
Sbjct: 136 PENLLFDEYHKLKLIDFGLCAK--PKGNKDYHLQTCCGSLAYAAPELIQGKSY-LGSEAD 192
Query: 946 VYSYGVVLLEVLTGKEPTD 964
V+S G++L ++ G P D
Sbjct: 193 VWSMGILLYVLMCGFLPFD 211
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 797 ELPERDQFSAEVQTLGSIRHKNIVRLLGCC-NNGRTRLLLFDYISNGSLAGLLHEKKVFL 855
E P+ + + E+ L + H NI+++L N G +L++ + S L + ++ L
Sbjct: 69 EDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFI-DRHPRL 127
Query: 856 DWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLA 908
D I + + YL + IIHRDIK NI++ F L DFG A
Sbjct: 128 DEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 86/211 (40%), Gaps = 22/211 (10%)
Query: 764 NIVGKGVSGIVYRVEIP-SRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRL 822
++G+G G V V++ + +V A+K L + + E F E L + K I L
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHE------KKVFLDWDSRYKIILGVAHGLAYLHH 876
+ L+ DY G L LL + +++ + + I + H L Y
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY--- 196
Query: 877 DCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGY 936
+HRDIK +NIL+ LADFG + L YI+PE
Sbjct: 197 ------VHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQ 249
Query: 937 SL-----KITEKSDVYSYGVVLLEVLTGKEP 962
++ + + D +S GV + E+L G+ P
Sbjct: 250 AMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 69/179 (38%), Gaps = 34/179 (18%)
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
I + +A + +LH ++HRD+K +NI + DFGL
Sbjct: 169 IFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 923 XXXXYG----------YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAH 972
Y Y++PE + + K D++S G++L E+L R+
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV----R 281
Query: 973 IITWVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDV 1031
IIT V R +F +L Q + +Q+ML +P P ERP D+
Sbjct: 282 IITDV------RNLKF-PLLFTQKYPQEHMMVQDML----------SPSPTERPEATDI 323
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 85/206 (41%), Gaps = 25/206 (12%)
Query: 766 VGKGVSGIVYRVEIPSRQV---IAVKKLWPVKNGELPERDQFSAE-VQTLGSIRHKNIVR 821
+G+G G V+R+E +Q AVKK+ + F AE + + IV
Sbjct: 82 LGRGSFGEVHRME--DKQTGFQCAVKKV---------RLEVFRAEELMACAGLTSPRIVP 130
Query: 822 LLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVA-HGLAYLHHDCVP 880
L G G + + + GSL L+ E+ + + Y LG A GL YLH
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALY--YLGQALEGLEYLHSR--- 185
Query: 881 PIIHRDIKSNNILVGPQ-FEAFLADFGLAKLFXXXXXXXXXXXXXXXYG---YIAPEYGY 936
I+H D+K++N+L+ A L DFG A G ++APE
Sbjct: 186 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL 245
Query: 937 SLKITEKSDVYSYGVVLLEVLTGKEP 962
K DV+S ++L +L G P
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 819 IVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDC 878
+ +L C + +Y++ G L + + F + + + +A GL +L
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF-YAAEIAIGLFFLQSKG 462
Query: 879 VPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSL 938
II+RD+K +N+++ + +ADFG+ K YIAPE
Sbjct: 463 ---IIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQ 517
Query: 939 KITEKSDVYSYGVVLLEVLTGKEPTDSRIPD 969
+ D +++GV+L E+L G+ P + D
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 548
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 28/180 (15%)
Query: 795 NGELPERDQFSAEVQTLGSIRHKNIVRLLGCC------------NNGRTR----LLLFDY 838
N E ER EV+ L + H NIV GC N+ R++ + ++
Sbjct: 47 NNEKAER-----EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEF 101
Query: 839 ISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQ 897
G+L + +++ LD ++ + G+ Y+H +I+RD+K +NI +
Sbjct: 102 CDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT 158
Query: 898 FEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVL 957
+ + DFGL Y++PE S ++ D+Y+ G++L E+L
Sbjct: 159 KQVKIGDFGLVTSLKNDGKRXRSKGTLR---YMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 20/154 (12%)
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+ GL LH + I++RD+K NIL+ ++D GLA
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA---VHVPEGQTIKGRVGT 348
Query: 927 YGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRERKR 986
GY+APE + + T D ++ G +L E++ G+ P R ++ KR
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK--------------KKIKR 394
Query: 987 EFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNP 1020
E L +++ + + L LLC +P
Sbjct: 395 EEVERLVKEVPEEYSERFSPQARSLCSQLLCKDP 428
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+ GL LH + I++RD+K NIL+ ++D GLA
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA---VHVPEGQTIKGRVGT 348
Query: 927 YGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSR 966
GY+APE + + T D ++ G +L E++ G+ P R
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 17/112 (15%)
Query: 862 KIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXX 921
KI + + L +LH +IHRD+K +N+L+ + DFG++
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 922 XXXXXYGYIAPEY--------GYSLKITEKSDVYSYGVVLLEVLTGKEPTDS 965
Y APE GYS+ KSD++S G+ +E+ + P DS
Sbjct: 198 GCKP---YXAPERINPELNQKGYSV----KSDIWSLGITXIELAILRFPYDS 242
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 127/308 (41%), Gaps = 67/308 (21%)
Query: 764 NIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLG-SIRHKNIVR 821
I+G G SG +V++ R V AVK++ + D E++ L S H N++R
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPV-AVKRML------IDFCDIALMEIKLLTESDDHPNVIR 91
Query: 822 LLGCCNNGRTRLLLFDYIS----NGSLAGLLHEKKVF---LDWDSRY---KIILGVAHGL 871
C+ R L YI+ N +L L+ K V L Y ++ +A G+
Sbjct: 92 YY--CSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 146
Query: 872 AYLHHDCVPPIIHRDIKSNNILV--GPQFEA-----------FLADFGLAKLFXXXXXXX 918
A+LH IIHRD+K NILV +F A ++DFGL K
Sbjct: 147 AHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 919 XXXXX--XXXYGYIAPEY---GYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAH 972
G+ APE ++T D++S G V +L+ GK P + ++
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN 263
Query: 973 IITWVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVT 1032
II + E + DR L+ + I +M ++ P +RPT
Sbjct: 264 IIRGIFS-----LDEMKCLHDRSLIAEATDLISQM----------IDHDPLKRPT----- 303
Query: 1033 AMLKEIRH 1040
+K +RH
Sbjct: 304 -AMKVLRH 310
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 51/227 (22%), Positives = 102/227 (44%), Gaps = 35/227 (15%)
Query: 746 FQKLNFSVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
F++LNF +T+L++ + SG +++ ++ K+ V++ + F+
Sbjct: 9 FKQLNF-----LTKLNENH------SGELWKGRWQGNDIVV--KVLKVRDWSTRKSRDFN 55
Query: 806 AEVQTLGSIRHKNIVRLLGCCNN--GRTRLLLFDYISNGSLAGLLHEKKVF-LDWDSRYK 862
E L H N++ +LG C + L+ ++ GSL +LHE F +D K
Sbjct: 56 EECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVK 115
Query: 863 IILGVAHGLAYLHHDCVPPIIHRD-IKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXX 921
L +A G+A+LH + P+I R + S ++++ A ++ + F
Sbjct: 116 FALDMARGMAFLH--TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAP- 172
Query: 922 XXXXXYGYIAPEYGYSLKIT------EKSDVYSYGVVLLEVLTGKEP 962
++APE +L+ +D++S+ V+L E++T + P
Sbjct: 173 ------AWVAPE---ALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 16/198 (8%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+V + +G Y ++I ++VI K E E + L + RH + L
Sbjct: 26 LVREKATGRYYAMKILRKEVIIAKD----------EVAHTVTESRVLQNTRHPFLTALKY 75
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ +Y + G L L ++VF + +R+ + L YLH +++
Sbjct: 76 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHSR---DVVY 131
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+++ + DFGL K Y+APE
Sbjct: 132 RDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 189
Query: 945 DVYSYGVVLLEVLTGKEP 962
D + GVV+ E++ G+ P
Sbjct: 190 DWWGLGVVMYEMMCGRLP 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 16/198 (8%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+V + +G Y ++I ++VI K E E + L + RH + L
Sbjct: 23 LVREKATGRYYAMKILRKEVIIAKD----------EVAHTVTESRVLQNTRHPFLTALKY 72
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ +Y + G L L ++VF + +R+ + L YLH +++
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHSR---DVVY 128
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+++ + DFGL K Y+APE
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186
Query: 945 DVYSYGVVLLEVLTGKEP 962
D + GVV+ E++ G+ P
Sbjct: 187 DWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 16/198 (8%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+V + +G Y ++I ++VI K E E + L + RH + L
Sbjct: 23 LVREKATGRYYAMKILRKEVIIAKD----------EVAHTVTESRVLQNTRHPFLTALKY 72
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ +Y + G L L ++VF + +R+ + L YLH +++
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHSR---DVVY 128
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+++ + DFGL K Y+APE
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186
Query: 945 DVYSYGVVLLEVLTGKEP 962
D + GVV+ E++ G+ P
Sbjct: 187 DWWGLGVVMYEMMCGRLP 204
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 11/162 (6%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTR--LLLFDYISNGSLAGL--LHEKKVFLDWDSRYK 862
E+Q L +RHKN+++L+ N + ++ +Y G L + EK+ + Y
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGY- 114
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
+ GL YLH I+H+DIK N+L+ ++ G+A+
Sbjct: 115 -FCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT 170
Query: 923 XXXXYGYIAPEYGYSLKITE--KSDVYSYGVVLLEVLTGKEP 962
+ PE L K D++S GV L + TG P
Sbjct: 171 SQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 26/213 (12%)
Query: 764 NIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQ---FSAEVQTLGSIRHKNIV 820
++G+G G V V++ + + I K+ + E+ +R + F E L + + I
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKI--LNKWEMLKRAETACFREERDVLVNGDCQWIT 137
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLL--HEKKVFLDWDSRY--KIILGVA--HGLAYL 874
L + L+ DY G L LL E K+ D Y +++L + H L Y
Sbjct: 138 ALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY- 196
Query: 875 HHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY 934
+HRDIK +N+L+ LADFG + L YI+PE
Sbjct: 197 --------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEI 247
Query: 935 GYSL-----KITEKSDVYSYGVVLLEVLTGKEP 962
++ K + D +S GV + E+L G+ P
Sbjct: 248 LQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 40.4 bits (93), Expect = 0.006, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 830 RTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKS 889
RT L+F++++N L ++ D+D R+ + + L Y H I+HRD+K
Sbjct: 107 RTPALVFEHVNNTDFKQL---RQTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKP 159
Query: 890 NNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-------YGYSLKIT 941
+N+++ + L D+GLA+ + G PE Y YSL
Sbjct: 160 HNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSL--- 213
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
D++S G +L ++ KEP
Sbjct: 214 ---DMWSLGCMLASMIFRKEP 231
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
Length = 448
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 127/308 (41%), Gaps = 67/308 (21%)
Query: 764 NIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLG-SIRHKNIVR 821
I+G G SG +V++ R V AVK++ + D E++ L S H N++R
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPV-AVKRML------IDFCDIALMEIKLLTESDDHPNVIR 91
Query: 822 LLGCCNNGRTRLLLFDYIS----NGSLAGLLHEKKVF---LDWDSRY---KIILGVAHGL 871
C+ R L YI+ N +L L+ K V L Y ++ +A G+
Sbjct: 92 YY--CSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 146
Query: 872 AYLHHDCVPPIIHRDIKSNNILV--GPQFEA-----------FLADFGLAKLFXXXXXXX 918
A+LH IIHRD+K NILV +F A ++DFGL K
Sbjct: 147 AHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 919 XXXXX--XXXYGYIAPEY---GYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIPDGAH 972
G+ APE ++T D++S G V +L+ GK P + ++
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN 263
Query: 973 IITWVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVT 1032
II + E + DR L+ + I +M ++ P +RPT
Sbjct: 264 IIRGIFS-----LDEMKCLHDRSLIAEATDLISQM----------IDHDPLKRPT----- 303
Query: 1033 AMLKEIRH 1040
+K +RH
Sbjct: 304 -AMKVLRH 310
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 15/198 (7%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+V + +G Y ++I ++VI K E E + L + RH + L
Sbjct: 166 LVKEKATGRYYAMKILKKEVIVAKD----------EVAHTLTENRVLQNSRHPFLTALKY 215
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ +Y + G L L ++VF + +R+ + L YLH + +++
Sbjct: 216 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLHSE--KNVVY 272
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+K N+++ + DFGL K Y+APE
Sbjct: 273 RDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAV 330
Query: 945 DVYSYGVVLLEVLTGKEP 962
D + GVV+ E++ G+ P
Sbjct: 331 DWWGLGVVMYEMMCGRLP 348
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 26/213 (12%)
Query: 764 NIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQ---FSAEVQTLGSIRHKNIV 820
++G+G G V V++ + + I K+ + E+ +R + F E L + + I
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKI--LNKWEMLKRAETACFREERDVLVNGDCQWIT 153
Query: 821 RLLGCCNNGRTRLLLFDYISNGSLAGLL--HEKKVFLDWDSRY--KIILGVA--HGLAYL 874
L + L+ DY G L LL E K+ D Y +++L + H L Y
Sbjct: 154 ALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY- 212
Query: 875 HHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY 934
+HRDIK +N+L+ LADFG + L YI+PE
Sbjct: 213 --------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEI 263
Query: 935 GYSL-----KITEKSDVYSYGVVLLEVLTGKEP 962
++ K + D +S GV + E+L G+ P
Sbjct: 264 LQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 16/198 (8%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+V + +G Y ++I ++VI K E E + L + RH + L
Sbjct: 23 LVREKATGRYYAMKILRKEVIIAKD----------EVAHTVTESRVLQNTRHPFLTALKY 72
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ +Y + G L L ++VF + +R+ + L YLH +++
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHSR---DVVY 128
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+++ + DFGL K Y+APE
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 945 DVYSYGVVLLEVLTGKEP 962
D + GVV+ E++ G+ P
Sbjct: 187 DWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 16/198 (8%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+V + +G Y ++I ++VI K E E + L + RH + L
Sbjct: 23 LVREKATGRYYAMKILRKEVIIAKD----------EVAHTVTESRVLQNTRHPFLTALKY 72
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ +Y + G L L ++VF + +R+ + L YLH +++
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHSR---DVVY 128
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+++ + DFGL K Y+APE
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 945 DVYSYGVVLLEVLTGKEP 962
D + GVV+ E++ G+ P
Sbjct: 187 DWWGLGVVMYEMMCGRLP 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 16/198 (8%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+V + +G Y ++I ++VI K E E + L + RH + L
Sbjct: 28 LVREKATGRYYAMKILRKEVIIAKD----------EVAHTVTESRVLQNTRHPFLTALKY 77
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ +Y + G L L ++VF + +R+ + L YLH +++
Sbjct: 78 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHSR---DVVY 133
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+++ + DFGL K Y+APE
Sbjct: 134 RDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 191
Query: 945 DVYSYGVVLLEVLTGKEP 962
D + GVV+ E++ G+ P
Sbjct: 192 DWWGLGVVMYEMMCGRLP 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 16/198 (8%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+V + +G Y ++I ++VI K E E + L + RH + L
Sbjct: 23 LVREKATGRYYAMKILRKEVIIAKD----------EVAHTVTESRVLQNTRHPFLTALKY 72
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ +Y + G L L ++VF + +R+ + L YLH +++
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHSR---DVVY 128
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RDIK N+++ + DFGL K Y+APE
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 945 DVYSYGVVLLEVLTGKEP 962
D + GVV+ E++ G+ P
Sbjct: 187 DWWGLGVVMYEMMCGRLP 204
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 15/198 (7%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+V + +G Y ++I ++VI K E E + L + RH + L
Sbjct: 169 LVKEKATGRYYAMKILKKEVIVAKD----------EVAHTLTENRVLQNSRHPFLTALKY 218
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ +Y + G L L ++VF + +R+ + L YLH + +++
Sbjct: 219 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLHSE--KNVVY 275
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+K N+++ + DFGL K Y+APE
Sbjct: 276 RDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAV 333
Query: 945 DVYSYGVVLLEVLTGKEP 962
D + GVV+ E++ G+ P
Sbjct: 334 DWWGLGVVMYEMMCGRLP 351
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 124/312 (39%), Gaps = 71/312 (22%)
Query: 764 NIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLG-SIRHKNIVR 821
I+G G SG +V++ R V AVK++ + D E++ L S H N++R
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPV-AVKRML------IDFCDIALMEIKLLTESDDHPNVIR 73
Query: 822 LLGCCNNGRTRLLLFDYIS----NGSLAGLLHEKKVF---LDWDSRY---KIILGVAHGL 871
C+ R L YI+ N +L L+ K V L Y ++ +A G+
Sbjct: 74 YY--CSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 872 AYLHHDCVPPIIHRDIKSNNILV--GPQFEA-----------FLADFGLAKLFXXXXXXX 918
A+LH IIHRD+K NILV +F A ++DFGL K
Sbjct: 129 AHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 919 XXXXX--XXXYGYIAPE-------YGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
G+ APE ++T D++S G V +L+ GK P +
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 969 DGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTM 1028
++II + E + DR L+ + I +M ++ P +RPT
Sbjct: 246 RESNIIRGIFS-----LDEMKCLHDRSLIAEATDLISQM----------IDHDPLKRPT- 289
Query: 1029 KDVTAMLKEIRH 1040
+K +RH
Sbjct: 290 -----AMKVLRH 296
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 40.0 bits (92), Expect = 0.008, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 19/203 (9%)
Query: 766 VGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQF--SAEVQTLGSIRHKNIVRL 822
+G+G GIV+R VE S KK + K ++ DQ E+ L RH+NI+ L
Sbjct: 13 LGRGEFGIVHRCVETSS------KKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHL 66
Query: 823 LGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLH-HDCVPP 881
+ +++F++IS + ++ L+ + V L +LH H+
Sbjct: 67 HESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---- 122
Query: 882 IIHRDIKSNNILVGPQFEAFLA--DFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLK 939
I H DI+ NI+ + + + +FG A+ Y APE
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE---YYAPEVHQHDV 179
Query: 940 ITEKSDVYSYGVVLLEVLTGKEP 962
++ +D++S G ++ +L+G P
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINP 202
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 52/230 (22%), Positives = 86/230 (37%), Gaps = 38/230 (16%)
Query: 757 VTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRH 816
+T +G+G G+V+ + K + N EL R++ EV+ L + H
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELA-REKVMREVKALAKLEH 62
Query: 817 KNIVRLLGCC--NNGRTRLL-----LFDYISNGSLAGLLHEKKVFLDW-------DSRYK 862
IVR N +L ++ YI L K+ DW + R +
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQ-----LCRKENLKDWMNGRCTIEERER 117
Query: 863 -----IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXX 917
I L +A + +LH ++HRD+K +NI + DFGL
Sbjct: 118 SVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 918 XXXXXXXXXYG----------YIAPEYGYSLKITEKSDVYSYGVVLLEVL 957
Y Y++PE + + K D++S G++L E+L
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 830 RTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKS 889
RT L+F++++N L + D+D R+ + + L Y H I+HRD+K
Sbjct: 107 RTPALVFEHVNNTDFKQLY---QTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKP 159
Query: 890 NNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-------YGYSLKIT 941
+N+L+ + L D+GLA+ + G PE Y YSL
Sbjct: 160 HNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSL--- 213
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
D++S G +L ++ KEP
Sbjct: 214 ---DMWSLGCMLASMIFRKEP 231
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 103/241 (42%), Gaps = 24/241 (9%)
Query: 439 GEIPPEIGGCTGLIRLRLGSN-NFSGHIPSRIGLLHRLTFLELSENQFTGEIPPEIGNCT 497
+I P + T L LG+N N S P + L +L ++E++ P I N T
Sbjct: 123 SDISP-LANLTKXYSLNLGANHNLSDLSP--LSNXTGLNYLTVTESKVKDVTP--IANLT 177
Query: 498 QLEMVDLHQNKLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNI 557
L + L+ N+++ P L L L+ +N I P + T LN L + N I
Sbjct: 178 DLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANXTRLNSLKIGNNKI 233
Query: 558 TGLIPXXXXXXXXXXXXXXXXNRINGSIPEEIGRLQGLDIL--LNLSWNALTGPIPESFS 615
T L P I + +I ++ L L LN+ N ++ +
Sbjct: 234 TDLSPLANLSQLTWL-------EIGTNQISDINAVKDLTKLKXLNVGSNQISDI--SVLN 284
Query: 616 NLSKLANLDLSNNML-TGSLKVLGSLDNLVSLNVSYNHFSGILPNTKLFHGLPASAFYGN 674
NLS+L +L L+NN L +V+G L NL +L +S NH + I P L SA + N
Sbjct: 285 NLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRPLASLSKX--DSADFAN 342
Query: 675 Q 675
Q
Sbjct: 343 Q 343
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 39.7 bits (91), Expect = 0.010, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 862 KIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXX 921
K+ + + L YL +IHRD+K +NIL+ + + L DFG++
Sbjct: 128 KMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 922 XXXXXYGYIAPEYGYSLKITE-----KSDVYSYGVVLLEVLTGKEP 962
Y+APE T+ ++DV+S G+ L+E+ TG+ P
Sbjct: 186 GCA---AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 76/193 (39%), Gaps = 41/193 (21%)
Query: 795 NGELPERDQFSAEVQTLGSIRHKNIVRLLGCC-------------------------NNG 829
N E ER EV+ L + H NIV GC N+
Sbjct: 48 NNEKAER-----EVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSS 102
Query: 830 RTR----LLLFDYISNGSLAGLLHEKK-VFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
R++ + ++ G+L + +++ LD ++ + G+ Y+H +IH
Sbjct: 103 RSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIH 159
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+K +NI + + + DFGL Y++PE S ++
Sbjct: 160 RDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLR---YMSPEQISSQDYGKEV 216
Query: 945 DVYSYGVVLLEVL 957
D+Y+ G++L E+L
Sbjct: 217 DLYALGLILAELL 229
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 127/312 (40%), Gaps = 71/312 (22%)
Query: 764 NIVGKGVSG-IVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLG-SIRHKNIVR 821
I+G G SG +V++ R V AVK++ + D E++ L S H N++R
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPV-AVKRML------IDFCDIALMEIKLLTESDDHPNVIR 73
Query: 822 LLGCCNNGRTRLLLFDYIS----NGSLAGLLHEKKVF---LDWDSRY---KIILGVAHGL 871
C+ R L YI+ N +L L+ K V L Y ++ +A G+
Sbjct: 74 YY--CSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 872 AYLHHDCVPPIIHRDIKSNNILV--GPQFEA-----------FLADFGLAKLFXXXXXXX 918
A+LH IIHRD+K NILV +F A ++DFGL K
Sbjct: 129 AHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 919 XXXXX--XXXYGYIAPE-------YGYSLKITEKSDVYSYGVVLLEVLT-GKEPTDSRIP 968
G+ APE ++T D++S G V +L+ GK P +
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 969 DGAHIITWVNGELRERKREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTM 1028
++II + E + DR L+ + I +M ++ P +RPT
Sbjct: 246 RESNIIRGIFS-----LDEMKCLHDRSLIAEATDLISQM----------IDHDPLKRPT- 289
Query: 1029 KDVTAMLKEIRH 1040
+K +RH
Sbjct: 290 -----AMKVLRH 296
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 30/176 (17%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTR--LLLFDYISNGSLAGLLHE-KKVFLDWDSRYKI 863
E + L + HKNIV+L TR +L+ ++ GSL +L E + +S + I
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 864 IL-GVAHGLAYLHHDCVPPIIHRDIKSNNIL--VGPQFEAF--LADFGLAKLFXXXXXXX 918
+L V G+ +L + I+HR+IK NI+ +G ++ L DFG A+
Sbjct: 117 VLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR------ELE 167
Query: 919 XXXXXXXXYG---YIAPEYGYSLKITEKS---------DVYSYGVVLLEVLTGKEP 962
YG Y+ P+ Y + K D++S GV TG P
Sbjct: 168 DDEQFVXLYGTEEYLHPDM-YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 11/159 (6%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNN----GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYK 862
E++ L H NI+ L + +L L + LA ++H++++ +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY 138
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
+ + GL LH ++HRD+ NIL+ + + DF LA+
Sbjct: 139 FMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTH 192
Query: 923 XXXXYGYIAPEYGYSLK-ITEKSDVYSYGVVLLEVLTGK 960
Y APE K T+ D++S G V+ E+ K
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 30/176 (17%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTR--LLLFDYISNGSLAGLLHE-KKVFLDWDSRYKI 863
E + L + HKNIV+L TR +L+ ++ GSL +L E + +S + I
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 864 IL-GVAHGLAYLHHDCVPPIIHRDIKSNNIL--VGPQFEAF--LADFGLAKLFXXXXXXX 918
+L V G+ +L + I+HR+IK NI+ +G ++ L DFG A+
Sbjct: 117 VLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR------ELE 167
Query: 919 XXXXXXXXYG---YIAPEYGYSLKITEKS---------DVYSYGVVLLEVLTGKEP 962
YG Y+ P+ Y + K D++S GV TG P
Sbjct: 168 DDEQFVSLYGTEEYLHPDM-YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 11/159 (6%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNN----GRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYK 862
E++ L H NI+ L + +L L + LA ++H++++ +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY 138
Query: 863 IILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXX 922
+ + GL LH ++HRD+ NIL+ + + DF LA+
Sbjct: 139 FMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTH 192
Query: 923 XXXXYGYIAPEYGYSLK-ITEKSDVYSYGVVLLEVLTGK 960
Y APE K T+ D++S G V+ E+ K
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 38.9 bits (89), Expect = 0.014, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 867 VAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXX 926
+A GL +L II+RD+K +N+++ + +ADFG+ K
Sbjct: 130 IAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGT 184
Query: 927 YGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPD 969
YIAPE + D +++GV+L E+L G+ P + D
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 227
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 830 RTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKS 889
RT L+F++++N L + D+D R+ + + L Y H I+HRD+K
Sbjct: 106 RTPALVFEHVNNTDFKQLY---QTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKP 158
Query: 890 NNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-------YGYSLKIT 941
+N+++ + L D+GLA+ + G PE Y YSL
Sbjct: 159 HNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSL--- 212
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
D++S G +L ++ KEP
Sbjct: 213 ---DMWSLGCMLASMIFRKEP 230
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 830 RTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKS 889
RT L+F++++N L + D+D R+ + + L Y H I+HRD+K
Sbjct: 107 RTPALVFEHVNNTDFKQLY---QTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKP 159
Query: 890 NNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-------YGYSLKIT 941
+N+++ + L D+GLA+ + G PE Y YSL
Sbjct: 160 HNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSL--- 213
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
D++S G +L ++ KEP
Sbjct: 214 ---DMWSLGCMLASMIFRKEP 231
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 830 RTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKS 889
RT L+F++++N L + D+D R+ + + L Y H I+HRD+K
Sbjct: 105 RTPALVFEHVNNTDFKQLY---QTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKP 157
Query: 890 NNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-------YGYSLKIT 941
+N+++ + L D+GLA+ + G PE Y YSL
Sbjct: 158 HNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSL--- 211
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
D++S G +L ++ KEP
Sbjct: 212 ---DMWSLGCMLASMIFRKEP 229
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 830 RTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKS 889
RT L+F++++N L + D+D R+ + + L Y H I+HRD+K
Sbjct: 107 RTPALVFEHVNNTDFKQLY---QTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKP 159
Query: 890 NNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-------YGYSLKIT 941
+N+++ + L D+GLA+ + G PE Y YSL
Sbjct: 160 HNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSL--- 213
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
D++S G +L ++ KEP
Sbjct: 214 ---DMWSLGCMLASMIFRKEP 231
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 830 RTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKS 889
RT L+F++++N L + D+D R+ + + L Y H I+HRD+K
Sbjct: 106 RTPALVFEHVNNTDFKQLY---QTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKP 158
Query: 890 NNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-------YGYSLKIT 941
+N+++ + L D+GLA+ + G PE Y YSL
Sbjct: 159 HNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSL--- 212
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
D++S G +L ++ KEP
Sbjct: 213 ---DMWSLGCMLASMIFRKEP 230
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 830 RTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKS 889
RT L+F++++N L + D+D R+ + + L Y H I+HRD+K
Sbjct: 107 RTPALVFEHVNNTDFKQLY---QTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKP 159
Query: 890 NNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-------YGYSLKIT 941
+N+++ + L D+GLA+ + G PE Y YSL
Sbjct: 160 HNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSL--- 213
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
D++S G +L ++ KEP
Sbjct: 214 ---DMWSLGCMLASMIFRKEP 231
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 830 RTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKS 889
RT L+F++++N L + D+D R+ + + L Y H I+HRD+K
Sbjct: 107 RTPALVFEHVNNTDFKQLY---QTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKP 159
Query: 890 NNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-------YGYSLKIT 941
+N+++ + L D+GLA+ + G PE Y YSL
Sbjct: 160 HNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSL--- 213
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
D++S G +L ++ KEP
Sbjct: 214 ---DMWSLGCMLASMIFRKEP 231
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 830 RTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKS 889
RT L+F++++N L + D+D R+ + + L Y H I+HRD+K
Sbjct: 107 RTPALVFEHVNNTDFKQLY---QTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKP 159
Query: 890 NNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-------YGYSLKIT 941
+N+++ + L D+GLA+ + G PE Y YSL
Sbjct: 160 HNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSL--- 213
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
D++S G +L ++ KEP
Sbjct: 214 ---DMWSLGCMLASMIFRKEP 231
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 830 RTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKS 889
RT L+F++++N L + D+D R+ + + L Y H I+HRD+K
Sbjct: 112 RTPALVFEHVNNTDFKQLY---QTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKP 164
Query: 890 NNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-------YGYSLKIT 941
+N+++ + L D+GLA+ + G PE Y YSL
Sbjct: 165 HNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSL--- 218
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
D++S G +L ++ KEP
Sbjct: 219 ---DMWSLGCMLASMIFRKEP 236
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 830 RTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKS 889
RT L+F++++N L + D+D R+ + + L Y H I+HRD+K
Sbjct: 107 RTPALVFEHVNNTDFKQLY---QTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKP 159
Query: 890 NNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-------YGYSLKIT 941
+N+++ + L D+GLA+ + G PE Y YSL
Sbjct: 160 HNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSL--- 213
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
D++S G +L ++ KEP
Sbjct: 214 ---DMWSLGCMLASMIFRKEP 231
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 830 RTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKS 889
RT L+F++++N L + D+D R+ + + L Y H I+HRD+K
Sbjct: 107 RTPALVFEHVNNTDFKQLY---QTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKP 159
Query: 890 NNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-------YGYSLKIT 941
+N+++ + L D+GLA+ + G PE Y YSL
Sbjct: 160 HNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSL--- 213
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
D++S G +L ++ KEP
Sbjct: 214 ---DMWSLGCMLASMIFRKEP 231
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 830 RTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIHRDIKS 889
RT L+F++++N L + D+D R+ + + L Y H I+HRD+K
Sbjct: 107 RTPALVFEHVNNTDFKQLY---QTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKP 159
Query: 890 NNILVGPQFEAF-LADFGLAKLFXXXXXXXXXXXXXXXYGYIAPE-------YGYSLKIT 941
+N+++ + L D+GLA+ + G PE Y YSL
Sbjct: 160 HNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSL--- 213
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
D++S G +L ++ KEP
Sbjct: 214 ---DMWSLGCMLASMIFRKEP 231
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 818 NIVRLLGCCNN---GRTRLLL-FDYISNGSLAGLLHEK--KVFLDWDSRYKIILGVAHGL 871
+IVR++ N GR LL+ + + G L + ++ + F + ++ +I+ + +
Sbjct: 86 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAI 144
Query: 872 AYLHHDCVPPIIHRDIKSNNILVG---PQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
YLH I HRD+K N+L P L DFG AK Y
Sbjct: 145 QYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY- 198
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE K + D++S GV++ +L G P
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 818 NIVRLLGCCNN---GRTRLLL-FDYISNGSLAGLLHEK--KVFLDWDSRYKIILGVAHGL 871
+IVR++ N GR LL+ + + G L + ++ + F + ++ +I+ + +
Sbjct: 76 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAI 134
Query: 872 AYLHHDCVPPIIHRDIKSNNILVG---PQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
YLH I HRD+K N+L P L DFG AK Y
Sbjct: 135 QYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY- 188
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE K + D++S GV++ +L G P
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 818 NIVRLLGCCNN---GRTRLLL-FDYISNGSLAGLLHEK--KVFLDWDSRYKIILGVAHGL 871
+IVR++ N GR LL+ + + G L + ++ + F + ++ +I+ + +
Sbjct: 78 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAI 136
Query: 872 AYLHHDCVPPIIHRDIKSNNILVG---PQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
YLH I HRD+K N+L P L DFG AK Y
Sbjct: 137 QYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY- 190
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE K + D++S GV++ +L G P
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 818 NIVRLLGCCNN---GRTRLLL-FDYISNGSLAGLLHEK--KVFLDWDSRYKIILGVAHGL 871
+IVR++ N GR LL+ + + G L + ++ + F + ++ +I+ + +
Sbjct: 71 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAI 129
Query: 872 AYLHHDCVPPIIHRDIKSNNILVG---PQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
YLH I HRD+K N+L P L DFG AK Y
Sbjct: 130 QYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY- 183
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE K + D++S GV++ +L G P
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 818 NIVRLLGCCNN---GRTRLLL-FDYISNGSLAGLLHEK--KVFLDWDSRYKIILGVAHGL 871
+IVR++ N GR LL+ + + G L + ++ + F + ++ +I+ + +
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAI 128
Query: 872 AYLHHDCVPPIIHRDIKSNNILVG---PQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
YLH I HRD+K N+L P L DFG AK Y
Sbjct: 129 QYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY- 182
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE K + D++S GV++ +L G P
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 818 NIVRLLGCCNN---GRTRLLL-FDYISNGSLAGLLHEK--KVFLDWDSRYKIILGVAHGL 871
+IVR++ N GR LL+ + + G L + ++ + F + ++ +I+ + +
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAI 174
Query: 872 AYLHHDCVPPIIHRDIKSNNILVG---PQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
YLH I HRD+K N+L P L DFG AK Y
Sbjct: 175 QYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY- 228
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE K + D++S GV++ +L G P
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 818 NIVRLLGCCNN---GRTRLLL-FDYISNGSLAGLLHEK--KVFLDWDSRYKIILGVAHGL 871
+IVR++ N GR LL+ + + G L + ++ + F + ++ +I+ + +
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAI 128
Query: 872 AYLHHDCVPPIIHRDIKSNNILVG---PQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
YLH I HRD+K N+L P L DFG AK Y
Sbjct: 129 QYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTEPCYTPY- 182
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE K + D++S GV++ +L G P
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 818 NIVRLLGCCNN---GRTRLLL-FDYISNGSLAGLLHEK--KVFLDWDSRYKIILGVAHGL 871
+IVR++ N GR LL+ + + G L + ++ + F + ++ +I+ + +
Sbjct: 122 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAI 180
Query: 872 AYLHHDCVPPIIHRDIKSNNILVG---PQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
YLH I HRD+K N+L P L DFG AK Y
Sbjct: 181 QYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY- 234
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE K + D++S GV++ +L G P
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 38.5 bits (88), Expect = 0.020, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 801 RDQFSAEVQTLGSIR-HKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDS 859
R + EV+TL + +KNI+ L+ + L+F+ + GS+ + ++K F + ++
Sbjct: 54 RSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREA 113
Query: 860 RYKIILGVAHGLAYLHHDCVPPIIHRDIKSNNIL------VGPQFEAFLADFGLAKLFXX 913
+++ VA L +LH I HRD+K NIL V P + DF L
Sbjct: 114 S-RVVRDVAAALDFLH---TKGIAHRDLKPENILCESPEKVSP---VKICDFDLGSGMKL 166
Query: 914 XXXXXXXXXXXXXY-----GYIAPEY--GYSLKIT---EKSDVYSYGVVLLEVLTGKEP 962
Y+APE ++ + T ++ D++S GVVL +L+G P
Sbjct: 167 NNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 818 NIVRLLGCCNN---GRTRLLL-FDYISNGSLAGLLHEK--KVFLDWDSRYKIILGVAHGL 871
+IVR++ N GR LL+ + + G L + ++ + F + ++ +I+ + +
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAI 130
Query: 872 AYLHHDCVPPIIHRDIKSNNILVG---PQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
YLH I HRD+K N+L P L DFG AK Y
Sbjct: 131 QYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY- 184
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE K + D++S GV++ +L G P
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 30/170 (17%)
Query: 757 VTRLSDTNIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIR 815
+ R +G+G G VY+ ++ + + +A+K++ +++ E EV L ++
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEEGVPGTAIREVSLLKELQ 91
Query: 816 HKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDW--DSRYKIILGVAH---- 869
H+NI+ L ++ L+F+Y N + K ++D D ++I +
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEN--------DLKKYMDKNPDVSMRVIKSFLYQLIN 143
Query: 870 GLAYLH-HDCVPPIIHRDIKSNNILVG-------PQFEAFLADFGLAKLF 911
G+ + H C +HRD+K N+L+ P + + DFGLA+ F
Sbjct: 144 GVNFCHSRRC----LHRDLKPQNLLLSVSDASETPVLK--IGDFGLARAF 187
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 10/148 (6%)
Query: 819 IVRLLGCCNNGRTRLLLFDYISNGSLAGL-LHEKKVFLDWDSRYKIILGVAHGLAYLHHD 877
++ L N +L+ +Y + G + L L E + + ++I + G+ YLH +
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN 150
Query: 878 CVPPIIHRDIKSNNILVG---PQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEY 934
I+H D+K NIL+ P + + DFG+++ Y+APE
Sbjct: 151 ---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPE---YLAPEI 204
Query: 935 GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
IT +D+++ G++ +LT P
Sbjct: 205 LNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 38.1 bits (87), Expect = 0.024, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 818 NIVRLLGCCNN---GRTRLLL-FDYISNGSLAGLLHEK--KVFLDWDSRYKIILGVAHGL 871
+IVR++ N GR LL+ + + G L + ++ + F + ++ +I+ + +
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAI 130
Query: 872 AYLHHDCVPPIIHRDIKSNNILVG---PQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
YLH I HRD+K N+L P L DFG AK Y
Sbjct: 131 QYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY- 184
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE K + D++S GV++ +L G P
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 38.1 bits (87), Expect = 0.025, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 818 NIVRLLGCCNN---GRTRLLL-FDYISNGSLAGLLHEK--KVFLDWDSRYKIILGVAHGL 871
+IVR++ N GR LL+ + + G L + ++ + F + ++ +I+ + +
Sbjct: 77 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAI 135
Query: 872 AYLHHDCVPPIIHRDIKSNNILVG---PQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYG 928
YLH I HRD+K N+L P L DFG AK Y
Sbjct: 136 QYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY- 189
Query: 929 YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE K + D++S GV++ +L G P
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 38.1 bits (87), Expect = 0.030, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 16/201 (7%)
Query: 766 VGKGVSGIVYRVE-IPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G G G V V+ + + A+K L K +L + + E + L ++ +V+L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KIILGVAHGLAYLHHDCVPP 881
+ ++ +Y+ G + L F + +R+ +I+L YLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LD 161
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
+I+RD+K N+L+ Q +ADFG AK Y+APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----YLAPEIILSKGYN 216
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
+ D ++ GV++ E+ G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFL---ADFGLAKLFXXXXXX 917
Y+++L V YLH + IIHRD+K N+L+ Q E L DFG +K+
Sbjct: 121 YQMLLAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 918 XXXXXXXXXYGYIAPEY-------GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE GY+ + D +S GV+L L+G P
Sbjct: 174 RTLCGTPT---YLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSGYPP 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFL---ADFGLAKLFXXXXXX 917
Y+++L V YLH + IIHRD+K N+L+ Q E L DFG +K+
Sbjct: 127 YQMLLAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 179
Query: 918 XXXXXXXXXYGYIAPEY-------GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE GY+ + D +S GV+L L+G P
Sbjct: 180 RTLCGTPT---YLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSGYPP 224
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFL---ADFGLAKLFXXXXXX 917
Y+++L V YLH + IIHRD+K N+L+ Q E L DFG +K+
Sbjct: 121 YQMLLAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 918 XXXXXXXXXYGYIAPEY-------GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE GY+ + D +S GV+L L+G P
Sbjct: 174 RTLCGTPT---YLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSGYPP 218
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.7 bits (86), Expect = 0.033, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 15/198 (7%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+V + +G Y ++I ++VI K E E + L + RH + L
Sbjct: 26 LVKEKATGRYYAMKILKKEVIVAKD----------EVAHTLTENRVLQNSRHPFLTALKY 75
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ +Y + G L L ++VF + +R+ + L YLH + +++
Sbjct: 76 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLHSE--KNVVY 132
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+K N+++ + DFGL K Y+APE
Sbjct: 133 RDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAV 190
Query: 945 DVYSYGVVLLEVLTGKEP 962
D + GVV+ E++ G+ P
Sbjct: 191 DWWGLGVVMYEMMCGRLP 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.7 bits (86), Expect = 0.033, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 15/198 (7%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+V + +G Y ++I ++VI K E E + L + RH + L
Sbjct: 27 LVKEKATGRYYAMKILKKEVIVAKD----------EVAHTLTENRVLQNSRHPFLTALKY 76
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ +Y + G L L ++VF + +R+ + L YLH + +++
Sbjct: 77 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLHSE--KNVVY 133
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+K N+++ + DFGL K Y+APE
Sbjct: 134 RDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAV 191
Query: 945 DVYSYGVVLLEVLTGKEP 962
D + GVV+ E++ G+ P
Sbjct: 192 DWWGLGVVMYEMMCGRLP 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.7 bits (86), Expect = 0.033, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 15/198 (7%)
Query: 765 IVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+V + +G Y ++I ++VI K E E + L + RH + L
Sbjct: 28 LVKEKATGRYYAMKILKKEVIVAKD----------EVAHTLTENRVLQNSRHPFLTALKY 77
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILGVAHGLAYLHHDCVPPIIH 884
+ +Y + G L L ++VF + +R+ + L YLH + +++
Sbjct: 78 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLHSE--KNVVY 134
Query: 885 RDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKS 944
RD+K N+++ + DFGL K Y+APE
Sbjct: 135 RDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAV 192
Query: 945 DVYSYGVVLLEVLTGKEP 962
D + GVV+ E++ G+ P
Sbjct: 193 DWWGLGVVMYEMMCGRLP 210
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFL---ADFGLAKLFXXXXXX 917
Y+++L V YLH + IIHRD+K N+L+ Q E L DFG +K+
Sbjct: 121 YQMLLAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 918 XXXXXXXXXYGYIAPEY-------GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE GY+ + D +S GV+L L+G P
Sbjct: 174 RTLCGTPT---YLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSGYPP 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFL---ADFGLAKLFXXXXXX 917
Y+++L V YLH + IIHRD+K N+L+ Q E L DFG +K+
Sbjct: 120 YQMLLAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 172
Query: 918 XXXXXXXXXYGYIAPEY-------GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE GY+ + D +S GV+L L+G P
Sbjct: 173 RTLCGTPT---YLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSGYPP 217
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 37.7 bits (86), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 36/252 (14%)
Query: 752 SVDDVVTRLSDT-----NIVGKGVSGIVYR-VEIPSRQVIAVKKLWPVKNGELPERDQFS 805
S D R D +++G+G V + + + Q AVK + + G + R +
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKII-EKQPGHI--RSRVF 58
Query: 806 AEVQTLGSIR-HKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKII 864
EV+ L + H+N++ L+ L+F+ + GS+ +H+++ F + ++ ++
Sbjct: 59 REVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VV 117
Query: 865 LGVAHGLAYLHHDCVPPIIHRDIKSNNIL------VGPQFEAFLADFGLAKLFX-----X 913
VA L +LH+ I HRD+K NIL V P + DFGL
Sbjct: 118 QDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSP---VKICDFGLGSGIKLNGDCS 171
Query: 914 XXXXXXXXXXXXXYGYIAPE----YGYSLKITEK-SDVYSYGVVLLEVLTGKEPTDSRIP 968
Y+APE + I +K D++S GV+L +L+G P R
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG 231
Query: 969 DGAHIITWVNGE 980
W GE
Sbjct: 232 SDC---GWDRGE 240
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 37.4 bits (85), Expect = 0.040, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 145
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 146 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 198
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 199 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 37.4 bits (85), Expect = 0.040, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 37.4 bits (85), Expect = 0.040, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 37.4 bits (85), Expect = 0.040, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 37.4 bits (85), Expect = 0.042, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 37.4 bits (85), Expect = 0.044, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Query: 502 VDLHQNKLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNITGLI 561
+ L QN ++ P + L +DLS N I P+ L SLN LVL N IT L
Sbjct: 37 IRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELP 96
Query: 562 PXXXXXXXXXXXXXXXXNRINGSIPEEIGRLQGLDILLNLSWNALTGPIPESFSNLSKLA 621
N+IN + L L+ LL+L N L +FS L +
Sbjct: 97 KSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLN-LLSLYDNKLQTIAKGTFSPLRAIQ 155
Query: 622 NLDLSNN 628
+ L+ N
Sbjct: 156 TMHLAQN 162
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Query: 502 VDLHQNKLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNITGLI 561
+ L QN ++ P + L +DLS N I P+ L SLN LVL N IT L
Sbjct: 37 IRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELP 96
Query: 562 PXXXXXXXXXXXXXXXXNRINGSIPEEIGRLQGLDILLNLSWNALTGPIPESFSNLSKLA 621
N+IN + L L+ LL+L N L +FS L +
Sbjct: 97 KSLFEGLFSLQLLLLNANKINXLRVDAFQDLHNLN-LLSLYDNKLQTIAKGTFSPLRAIQ 155
Query: 622 NLDLSNN 628
+ L+ N
Sbjct: 156 TMHLAQN 162
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 37.4 bits (85), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFL---ADFGLAKLFXXXXXX 917
Y+++L V YLH + IIHRD+K N+L+ Q E L DFG +K+
Sbjct: 246 YQMLLAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 298
Query: 918 XXXXXXXXXYGYIAPEY-------GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE GY+ + D +S GV+L L+G P
Sbjct: 299 RTLCGTPT---YLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSGYPP 343
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 37.4 bits (85), Expect = 0.047, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 171
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 172 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 224
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 225 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 448 CTGLIRLRLGSNNFSGHIPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQLEMVDLHQN 507
CT L + SN +P G+ +T L L NQFT +P E+ N L ++DL N
Sbjct: 8 CTCLDTVVRCSNKGLKVLPK--GIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNN 64
Query: 508 KLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNIT 558
++ S + L L LS N + P L SL L L N+I+
Sbjct: 65 RISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 115
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 451 LIRLRLGSNNFSGHIPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQLEMVDLHQNKLQ 510
+ L L N F+ +P + LT ++LS N+ + N TQL + L N+L+
Sbjct: 33 VTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91
Query: 511 GTIPSSLEFLFGLNVLDLSMNSIGGTIPEN-LGKLTSLNKLVLSKN 555
P + + L L +L L N I +PE L++L+ L + N
Sbjct: 92 CIPPRTFDGLKSLRLLSLHGNDI-SVVPEGAFNDLSALSHLAIGAN 136
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 24/118 (20%)
Query: 79 TSFPYQLLSFSHLTSLVLSNANLTGEIPPAIGNLSSLINLDLSFNALTGNIPEEIGKLAX 138
T P +L ++ HLT + LSN ++ + N++ L+ L LS+N L IP
Sbjct: 44 TLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRC-IP-------- 94
Query: 139 XXXXXXXXXXIHGGIPREIGNCSKLRRLELYDNQLSGNIPAEIGQLEALEIIRAGGNP 196
PR LR L L+ N +S L AL + G NP
Sbjct: 95 ---------------PRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANP 137
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 610 IPESFSNLSKLANLDLSNNML-TGSLKVLGSLDNLVSLNVSYNHFSGILPNTKLFHGLPA 668
+P+ SN L +DLSNN + T S + ++ L++L +SYN I P T F GL +
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRT--FDGLKS 103
Score = 29.6 bits (65), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 18/125 (14%)
Query: 152 GIPREIGNCSKLRRLELYDNQLSGN----IPAEIGQLEALEIIRAGGNPGIHGEIPEEIS 207
GIPR++ ELY L GN +P E+ + L +I N I + S
Sbjct: 28 GIPRDVT--------ELY---LDGNQFTLVPKELSNYKHLTLIDLSNN-RISTLSNQSFS 75
Query: 208 NCKVLVFLGLADTGISGQIPRSVGELTNLRTLSVYTANITGYIPE-EIGNCSALENLFLY 266
N L+ L L+ + PR+ L +LR LS++ +I+ +PE + SAL +L +
Sbjct: 76 NMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIG 134
Query: 267 ENQIF 271
N ++
Sbjct: 135 ANPLY 139
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 37.4 bits (85), Expect = 0.047, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 16/201 (7%)
Query: 766 VGKGVSGIVYRVE-IPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G G G V V+ + + A+K L K +L + + E + L ++ +V+L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KIILGVAHGLAYLHHDCVPP 881
+ ++ +Y+ G + L F + +R+ +I+L YLH
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LD 161
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
+I+RD+K N+L+ Q +ADFG AK Y+APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----YLAPEIILSKGYN 216
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
+ D ++ GV++ E+ G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 37.4 bits (85), Expect = 0.047, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 16/201 (7%)
Query: 766 VGKGVSGIVYRVE-IPSRQVIAVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLG 824
+G G G V V+ + + A+K L K +L + + E + L ++ +V+L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 825 CCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KIILGVAHGLAYLHHDCVPP 881
+ ++ +Y+ G + L F + +R+ +I+L YLH
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LD 161
Query: 882 IIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKIT 941
+I+RD+K N+L+ Q +ADFG AK Y+APE S
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----YLAPEIILSKGYN 216
Query: 942 EKSDVYSYGVVLLEVLTGKEP 962
+ D ++ GV++ E+ G P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPP 237
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 37.4 bits (85), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 453 RLRLGSNNFSGHIPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQLEMVDLHQNKLQGT 512
RL L SN L +LT L LS+NQ T+L ++ LH+NKLQ
Sbjct: 32 RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSL 91
Query: 513 IPSSLEFLFGLNVLDLSMNSIGGTIPENL-GKLTSLNKLVLSKN 555
+ L L L L N + ++P+ + +LTSL K+ L N
Sbjct: 92 PNGVFDKLTQLKELALDTNQL-KSVPDGIFDRLTSLQKIWLHTN 134
Score = 30.0 bits (66), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 4/118 (3%)
Query: 443 PEIGGCTGLIRLRLGSNNFSGHIPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQLEMV 502
P C+G +R S + +P+ G+ T LEL N+ TQL +
Sbjct: 2 PSRCSCSG-TEIRCNSKGLTS-VPT--GIPSSATRLELESNKLQSLPHGVFDKLTQLTKL 57
Query: 503 DLHQNKLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNITGL 560
L QN++Q + L L +L L N + KLT L +L L N + +
Sbjct: 58 SLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSV 115
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 37.4 bits (85), Expect = 0.051, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 64/161 (39%), Gaps = 10/161 (6%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
E+ + IV L G G + + + GSL L+ + + + Y LG
Sbjct: 116 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALY--YLG 173
Query: 867 VA-HGLAYLHHDCVPPIIHRDIKSNNILVGPQ-FEAFLADFGLAKLFXXXXXXXXXXXXX 924
A GL YLH I+H D+K++N+L+ A L DFG A
Sbjct: 174 QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 230
Query: 925 XXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
G ++APE K D++S ++L +L G P
Sbjct: 231 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 861 YKIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFL---ADFGLAKLFXXXXXX 917
Y+++L V YLH + IIHRD+K N+L+ Q E L DFG +K+
Sbjct: 260 YQMLLAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 312
Query: 918 XXXXXXXXXYGYIAPEY-------GYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE GY+ + D +S GV+L L+G P
Sbjct: 313 RTLCGTPT---YLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSGYPP 357
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 37.0 bits (84), Expect = 0.053, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 64/161 (39%), Gaps = 10/161 (6%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
E+ + IV L G G + + + GSL L+ + + + Y LG
Sbjct: 100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALY--YLG 157
Query: 867 VA-HGLAYLHHDCVPPIIHRDIKSNNILVGPQ-FEAFLADFGLAKLFXXXXXXXXXXXXX 924
A GL YLH I+H D+K++N+L+ A L DFG A
Sbjct: 158 QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214
Query: 925 XXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
G ++APE K D++S ++L +L G P
Sbjct: 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 37.0 bits (84), Expect = 0.053, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 64/161 (39%), Gaps = 10/161 (6%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRYKIILG 866
E+ + IV L G G + + + GSL L+ + + + Y LG
Sbjct: 114 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALY--YLG 171
Query: 867 VA-HGLAYLHHDCVPPIIHRDIKSNNILVGPQ-FEAFLADFGLAKLFXXXXXXXXXXXXX 924
A GL YLH I+H D+K++N+L+ A L DFG A
Sbjct: 172 QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 228
Query: 925 XXYG---YIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
G ++APE K D++S ++L +L G P
Sbjct: 229 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 172 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPE 224
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 225 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 37.0 bits (84), Expect = 0.055, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 137
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 138 VLT----FEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPE 190
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 191 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 37.0 bits (84), Expect = 0.058, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 152 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 204
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 205 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 37.0 bits (84), Expect = 0.058, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.058, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.058, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.058, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 37.0 bits (84), Expect = 0.058, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 37.0 bits (84), Expect = 0.058, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 37.0 bits (84), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Query: 445 IGGCTGLIRLRLGSNNFS-GHIPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQLEMVD 503
G + L L++ N+F +P L LTFL+LS+ Q P + + L++++
Sbjct: 465 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524
Query: 504 LHQNKLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKL-TSLNKLVLSKNNIT 558
+ N + L L VLD S+N I + + L +SL L L++N+
Sbjct: 525 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 26/132 (19%)
Query: 498 QLEMVDLHQNKLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNI 557
+L+++DL + ++Q + + L L+ L L+ N I L+SL KLV + N+
Sbjct: 77 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 136
Query: 558 TGLIPXXXXXXXXXXXXXXXXNRINGSIPEEIGRLQGLDILLNLSWNALTG-PIPESFSN 616
L + P IG L+ L L N++ N + +PE FSN
Sbjct: 137 ASL----------------------ENFP--IGHLKTLKEL-NVAHNLIQSFKLPEYFSN 171
Query: 617 LSKLANLDLSNN 628
L+ L +LDLS+N
Sbjct: 172 LTNLEHLDLSSN 183
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 36.6 bits (83), Expect = 0.070, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 143
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 144 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 196
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 197 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 36.6 bits (83), Expect = 0.070, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 152 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 204
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 205 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.070, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 36.6 bits (83), Expect = 0.070, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 36.6 bits (83), Expect = 0.081, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 746 FQKLNFSVDDVVTRLSDTNIVGKGVSGIVYRVEIPSRQVIAVKKLWPVKNGELPERDQFS 805
F++LNF +T+L++ + SG +++ ++ K+ V++ + F+
Sbjct: 9 FKQLNF-----LTKLNENH------SGELWKGRWQGNDIVV--KVLKVRDWSTRKSRDFN 55
Query: 806 AEVQTLGSIRHKNIVRLLGCCNN--GRTRLLLFDYISNGSLAGLLHEKKVF-LDWDSRYK 862
E L H N++ +LG C + L+ + GSL +LHE F +D K
Sbjct: 56 EECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVK 115
Query: 863 IILGVAHGLAYLHHDCVPPIIHR 885
L A G A+LH + P+I R
Sbjct: 116 FALDXARGXAFLH--TLEPLIPR 136
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.086, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 15/180 (8%)
Query: 786 AVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLA 845
A+K L K +L E + E + L ++ +V+L + ++ +Y G +
Sbjct: 70 AMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 846 GLLHEKKVFLDWDSRY---KIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFL 902
L F + +R+ +I+L YLH +I+RD+K N+++ Q +
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 903 ADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
DFGLAK Y+APE S + D ++ GV++ E+ G P
Sbjct: 183 TDFGLAKRVKGRTWXLCGTPE-----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 36.6 bits (83), Expect = 0.086, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 136
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 137 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE 189
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 190 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 36.6 bits (83), Expect = 0.086, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 152 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE 204
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 205 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 36.6 bits (83), Expect = 0.087, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 67/170 (39%), Gaps = 38/170 (22%)
Query: 870 GLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXXXXXYGY 929
LA+LH ++H D+K NI +GP+ L DFG L Y
Sbjct: 169 ALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFG---LLVELGTAGAGEVQEGDPRY 222
Query: 930 IAPE-----YGYSLKITEKSDVYSYGVVLLEVLTGKEPTDSRIPDGAHIITWVNGELRER 984
+APE YG + +DV+S G+ +LEV E +P G W
Sbjct: 223 MAPELLQGSYGTA------ADVFSLGLTILEVACNME-----LPHGGE--GWQQLRQGYL 269
Query: 985 KREFTTILDRQLLMRSGTQIQEMLQVLGVALLCVNPCPEERPTMKDVTAM 1034
EFT L +L RS V ++ + P P+ R T + + A+
Sbjct: 270 PPEFTAGLSSEL--RS------------VLVMMLEPDPKLRATAEALLAL 305
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.087, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 15/180 (8%)
Query: 786 AVKKLWPVKNGELPERDQFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLA 845
A+K L K +L E + E + L ++ +V+L + ++ +Y G +
Sbjct: 70 AMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 846 GLLHEKKVFLDWDSRY---KIILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFL 902
L F + +R+ +I+L YLH +I+RD+K N+++ Q +
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMIDQQGYIQV 182
Query: 903 ADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
DFGLAK Y+APE S + D ++ GV++ E+ G P
Sbjct: 183 TDFGLAKRVKGRTWXLCGTPE-----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 36.2 bits (82), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Query: 445 IGGCTGLIRLRLGSNNFS-GHIPSRIGLLHRLTFLELSENQFTGEIPPEIGNCTQLEMVD 503
G + L L++ N+F +P L LTFL+LS+ Q P + + L++++
Sbjct: 441 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 500
Query: 504 LHQNKLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKL-TSLNKLVLSKNNIT 558
+ N + L L VLD S+N I + + L +SL L L++N+
Sbjct: 501 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 556
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 26/132 (19%)
Query: 498 QLEMVDLHQNKLQGTIPSSLEFLFGLNVLDLSMNSIGGTIPENLGKLTSLNKLVLSKNNI 557
+L+++DL + ++Q + + L L+ L L+ N I L+SL KLV + N+
Sbjct: 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 112
Query: 558 TGLIPXXXXXXXXXXXXXXXXNRINGSIPEEIGRLQGLDILLNLSWNALTG-PIPESFSN 616
L + P IG L+ L L N++ N + +PE FSN
Sbjct: 113 ASL----------------------ENFP--IGHLKTLKEL-NVAHNLIQSFKLPEYFSN 147
Query: 617 LSKLANLDLSNN 628
L+ L +LDLS+N
Sbjct: 148 LTNLEHLDLSSN 159
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 36.2 bits (82), Expect = 0.099, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 36.2 bits (82), Expect = 0.099, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 36.2 bits (82), Expect = 0.099, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 36.2 bits (82), Expect = 0.10, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 152 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 204
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 205 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.2 bits (82), Expect = 0.10, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 36.2 bits (82), Expect = 0.10, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 143
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 144 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 196
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 197 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 36.2 bits (82), Expect = 0.10, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 152 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 204
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 205 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 36.2 bits (82), Expect = 0.10, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 152 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 204
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 205 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 36.2 bits (82), Expect = 0.10, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 152 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 204
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 205 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.2 bits (82), Expect = 0.10, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 36.2 bits (82), Expect = 0.10, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y+ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+L+ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 115/308 (37%), Gaps = 94/308 (30%)
Query: 353 FSRLKQLELDNNRFFGQIPPTIGQLKELLLFFAWQNQLHGNIPELAYCVKLQALDLSHNF 412
+ L Q+ NN+ P + L +L+ NQ+ +I LA L L L +N
Sbjct: 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQI-ADITPLANLTNLTGLTLFNNQ 123
Query: 413 LTGSVPSSXXXXXXXXXXXXXXXRFSGEIPPEIGGCTGLIRLRLGSNNFSGHIPSRIGL- 471
+T +I P + T L RL L SN S I + GL
Sbjct: 124 IT-------------------------DIDP-LKNLTNLNRLELSSNTIS-DISALSGLT 156
Query: 472 -LHRLTFLELSENQFTGEIPPEIGNCTQLEMVDLHQNKLQGTIPSSLEFLFGLNVLDLSM 530
L +L+F NQ T P + N T LE +D+ NK V D+S+
Sbjct: 157 SLQQLSF----GNQVTDLKP--LANLTTLERLDISSNK----------------VSDISV 194
Query: 531 NSIGGTIPENLGKLTSLNKLVLSKNNITGLIPXXXXXXXXXXXXXXXXNRINGSIPEEIG 590
L KLT+L L+ + N I+ + P +NG+ ++IG
Sbjct: 195 ----------LAKLTNLESLIATNNQISDITPLGILTNLDEL-------SLNGNQLKDIG 237
Query: 591 RLQGLDILLNLSWNALTGPIPESFSNLSKLANLDLSNNMLTGSLKVLGSLDNLVSLNVSY 650
L ++L+ L +LDL+NN ++ +L L L L L +
Sbjct: 238 TL----------------------ASLTNLTDLDLANNQIS-NLAPLSGLTKLTELKLGA 274
Query: 651 NHFSGILP 658
N S I P
Sbjct: 275 NQISNISP 282
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 35.8 bits (81), Expect = 0.12, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 830 RTRLLLFDYISNGSLAGLLHEK--KVFLDWDSRYKIILGVAHGLAYLH-HDCVPPIIHRD 886
R L++ + + G L + E+ + F + ++ +I+ + + +LH H+ I HRD
Sbjct: 80 RCLLIIMECMEGGELFSRIQERGDQAFTEREAA-EIMRDIGTAIQFLHSHN----IAHRD 134
Query: 887 IKSNNIL-VGPQFEAFL--ADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
+K N+L + +A L DFG AK Y Y+APE K +
Sbjct: 135 VKPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPY-YVAPEVLGPEKYDKS 190
Query: 944 SDVYSYGVVLLEVLTGKEP 962
D++S GV++ +L G P
Sbjct: 191 CDMWSLGVIMYILLCGFPP 209
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 35.8 bits (81), Expect = 0.12, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 830 RTRLLLFDYISNGSLAGLLHEK--KVFLDWDSRYKIILGVAHGLAYLH-HDCVPPIIHRD 886
R L++ + + G L + E+ + F + ++ +I+ + + +LH H+ I HRD
Sbjct: 99 RCLLIIMECMEGGELFSRIQERGDQAFTEREAA-EIMRDIGTAIQFLHSHN----IAHRD 153
Query: 887 IKSNNIL-VGPQFEAFL--ADFGLAKLFXXXXXXXXXXXXXXXYGYIAPEYGYSLKITEK 943
+K N+L + +A L DFG AK Y Y+APE K +
Sbjct: 154 VKPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPY-YVAPEVLGPEKYDKS 209
Query: 944 SDVYSYGVVLLEVLTGKEP 962
D++S GV++ +L G P
Sbjct: 210 CDMWSLGVIMYILLCGFPP 228
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 35.8 bits (81), Expect = 0.12, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 807 EVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLAGLLHEKKVFLDWDSRY---KI 863
E + L ++ +V+L + ++ +Y++ G + L F + +R+ +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 864 ILGVAHGLAYLHHDCVPPIIHRDIKSNNILVGPQFEAFLADFGLAKLFXXXXXXXXXXXX 923
+L YLH +I+RD+K N+++ Q + DFG AK
Sbjct: 151 VLT----FEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
Query: 924 XXXYGYIAPEYGYSLKITEKSDVYSYGVVLLEVLTGKEP 962
Y+APE S + D ++ GV++ E+ G P
Sbjct: 204 -----YLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.139 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,880,944
Number of Sequences: 62578
Number of extensions: 1070027
Number of successful extensions: 5372
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 402
Number of HSP's that attempted gapping in prelim test: 2605
Number of HSP's gapped (non-prelim): 1589
length of query: 1079
length of database: 14,973,337
effective HSP length: 109
effective length of query: 970
effective length of database: 8,152,335
effective search space: 7907764950
effective search space used: 7907764950
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)