BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001429
(1079 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LYZ7|UPL4_ARATH E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana GN=UPL4 PE=1
SV=1
Length = 1502
Score = 1111 bits (2873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/1110 (55%), Positives = 793/1110 (71%), Gaps = 65/1110 (5%)
Query: 1 MGNRGQKRMEMAVDLPDDKRACSSLDFRPSTSNSSVQTHLNSTNSTPETHHNDMDTSSSA 60
M NRGQKRME+ +LP DKRAC+S DFRPSTS SSVQ N TN E DMDTSSSA
Sbjct: 1 MENRGQKRMEVVEELPADKRACNSQDFRPSTSGSSVQAQANDTNPGHENVDADMDTSSSA 60
Query: 61 SASSRSEEEPEKD-----AGYGSCDSDDAEPRHRGLRELQRRRSSSDHGKLRSILACLSE 115
S SSRS+EE +++ + YGSCDSD+ +PR R L++ QR+RSS DHGKL+S+L L+
Sbjct: 61 SPSSRSDEEEQEEQDKEDSDYGSCDSDEEDPRQRVLQDYQRQRSSGDHGKLKSLLLNLTG 120
Query: 116 DTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLLAVRAITY 175
+TDPS ++ LTELCEVLSF+ E+SLSS+MA+ LSPVLVKLA+HE N DIMLLA+RAITY
Sbjct: 121 ETDPSGQLSRLTELCEVLSFSTEESLSSVMANMLSPVLVKLAKHENNADIMLLAIRAITY 180
Query: 176 LCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRDQPHACLEGGAIMA 235
LCD++P S LVRHD +PALCQRL IEYLDVAEQCLQALEKISRD+P ACL GAIMA
Sbjct: 181 LCDVYPPSVEFLVRHDTIPALCQRLLTIEYLDVAEQCLQALEKISRDEPVACLNAGAIMA 240
Query: 236 ALTYIDFFSTSIQRVALSTVANICKKLPSECPSHLMEAVPILSNLLQYEDRQLVESVAIC 295
L++IDFFSTSIQRVA+STV NICK+L SE PS M+AVPIL LLQYEDRQLVE+VAIC
Sbjct: 241 VLSFIDFFSTSIQRVAISTVVNICKQLSSESPSPFMDAVPILCTLLQYEDRQLVENVAIC 300
Query: 296 LIKIAEQLSQSSQMLDEVCSHGLINQTTHLLNLNSRTTLSQPIYYGLIGLLVKISSGSI- 354
L KIA+Q S+S MLD++C HGLIN++THLLNLNSRTTLSQP+Y G+IG+L K+SSGS
Sbjct: 301 LTKIADQASESPAMLDQLCRHGLINESTHLLNLNSRTTLSQPVYNGVIGMLRKLSSGSAL 360
Query: 355 -------LNIGSVLKDILSTYDLSHGMSSPHMVDGHCNQVHEVLKLLNELLPTS-VGDQC 406
LNIG LK+I+STYD+SH +SS H ++ NQVHEVLKL+ ELLP S V D
Sbjct: 361 AFRTLYELNIGYSLKEIMSTYDISHSVSSTHPINACSNQVHEVLKLVIELLPASPVEDN- 419
Query: 407 VQLVLDKQSFLVDRPDLLQNFGMDILPMLIQVVNSGANIFVCYGCLSVINKLVYLSKSDM 466
QL +K+SFLV++PDLLQ FG D+LP++IQV+NSGAN++V YGCLS I+KL LSKS
Sbjct: 420 -QLASEKESFLVNQPDLLQQFGRDMLPVMIQVLNSGANVYVSYGCLSAIHKLTCLSKSGD 478
Query: 467 LIELLKSANIPSFLAGVFTRKDHHVLILALEIAEMILQKLSDTFLNSFVKEGVFFAIDAL 526
++ELLK+ N+ S LAG+ +RKDHHV+++AL++AE++L+K DTFLNSF+KEGVFFAI+AL
Sbjct: 479 IVELLKNTNMSSVLAGILSRKDHHVIVVALQVAEVLLEKYRDTFLNSFIKEGVFFAIEAL 538
Query: 527 LTPEKCSQLFPAFSGIQLCPSSSQKCAGREVLRCLCYAFDTGLSSSASEKQSCKLDKDSV 586
L+ ++ Q Q SQK +E+++CLC +F+ S +S Q+CK++KDSV
Sbjct: 539 LSSDRGQQ-------NQGSADLSQKPVTKEIVKCLCQSFE---RSLSSSSQTCKIEKDSV 588
Query: 587 HNLAKSIITKYFSPELFGSDKGLTDILQDLRSFSAALTDLMNVCTDNEAHARDEEKFYCI 646
+ LA I +F PE+F S+KGLTD+LQ+L++ S AL++LM V D AH +EKF+ I
Sbjct: 589 YVLATRIKEGFFGPEVFNSEKGLTDVLQNLKNLSVALSELMTVPID--AHVLHDEKFFSI 646
Query: 647 LHQIMEKLNGREPVSTFEFIESGIVKSLVTYLTNGLYLRDNAELHIPHSDLFVVEKRFEV 706
+QIME+LNGRE VSTFEFIESG+VKSL +YL+NGLY R ++ L + KRFEV
Sbjct: 647 WNQIMERLNGRESVSTFEFIESGVVKSLASYLSNGLYQRKLSKGGPECDSLPFIGKRFEV 706
Query: 707 LARLLLPYSDNLSEDSPVSVLIQKLQSALSSLENFPVILSHSFKLRSSYATVPYGRCIAH 766
RLL +SD ++ S+LIQKLQ++LSSLENFP++LS K ++S+A +P GRC ++
Sbjct: 707 FTRLL--WSDG---EATSSLLIQKLQNSLSSLENFPIVLSQFLKQKNSFAAIPNGRCTSY 761
Query: 767 PCLRVRFVRGDGETCLSDFSEDLLTVDPFSSLEAIEGYLWPKVTIK-----ESKDVESDC 821
PCL+VRF++ +GET L D+S+D +TVDP L+A++ YLWPKV I+ E+KD +C
Sbjct: 762 PCLKVRFLKAEGETSLRDYSQDFVTVDPLCYLDAVDQYLWPKVNIEPIDSVEAKDQAIEC 821
Query: 822 LMDQMNGQPLYLSSNSKSILGESSESMEHESTSAGLTPVKHDSISSTSGVPKMQ------ 875
Q L S S S ESS ME +S S+ + ++ + + +P Q
Sbjct: 822 QSSQ-------LQSTSISCQAESSSPMEIDSESSDASQLQGSQVEDQTQLPGQQNASSSE 874
Query: 876 ------DCKIKLTFDLDGQKLERTLTLYQAILQKQIKTDGEVIAGAKLWTQVYTIIYRRA 929
D +L F L+G +L+R+LT+YQAIL ++K++ E +KL + + I Y R+
Sbjct: 875 TSSEKEDAVPRLLFRLEGLELDRSLTVYQAILLHKLKSESEATNDSKL-SGPHNITYERS 933
Query: 930 MESKCNDPKNCVHLHPISDGDEARLHCASFFSSLFACQLAFELDKSS-PIYDILFLLKSL 988
++ D + + + DE R F S LF +LA L SS P YDILFLLKSL
Sbjct: 934 --AQLGDSRENLFPPGSMEDDEYR----PFLSYLFTHRLALRLKGSSHPPYDILFLLKSL 987
Query: 989 EGVNRLTCHLISHERIRAYAEGRFDNLDDLKVEVHSLRQNDFVNSKLTEKLEQQMRDSAA 1048
EG+NR HLIS ERI A+ EGR +NLDDL+V+V + ++FV+SKLTEKLEQQ+RDS A
Sbjct: 988 EGMNRFLFHLISLERINAFGEGRLENLDDLRVQVRPVPHSEFVSSKLTEKLEQQLRDSFA 1047
Query: 1049 VSTGGVPSWCNQLMASCPFLFSLKQGASIF 1078
VST G+P W N LM SCP LFS + + F
Sbjct: 1048 VSTCGLPPWFNDLMDSCPCLFSFEAKSKYF 1077
>sp|Q6WWW4|UPL3_ARATH E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana GN=UPL3
PE=1 SV=1
Length = 1888
Score = 494 bits (1273), Expect = e-138, Method: Compositional matrix adjust.
Identities = 299/781 (38%), Positives = 445/781 (56%), Gaps = 72/781 (9%)
Query: 103 HGKLRSILACLSEDTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETN 162
+G+++ IL+ L + + + + +LT+LCE+LS EDSLS+ DS PVLV L HE+N
Sbjct: 192 NGRMKKILSGLRAEGEEGKQVEALTQLCEMLSIGTEDSLSTFSVDSFVPVLVGLLNHESN 251
Query: 163 PDIMLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRD 222
PDIMLLA RA+T+LCD+ P S +V + AV L RL IEY+D+AEQ LQAL+KIS++
Sbjct: 252 PDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCLVARLLTIEYMDLAEQSLQALKKISQE 311
Query: 223 QPHACLEGGAIMAALTYIDFFSTSIQRVALSTVANICKKLPSECPSHLMEAVPILSNLLQ 282
P ACL GA+MA L+Y+DFFST +QRVALST AN+CKKLPS+ ++MEAVP+L+NLLQ
Sbjct: 312 HPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDASDYVMEAVPLLTNLLQ 371
Query: 283 YEDRQLVESVAICLIKIAEQLSQSSQMLDEVCSHGLINQTTHLLNLNS----RTTLSQPI 338
Y D +++E +ICL +IAE + + LDE+C+HGL+ Q L++ ++ + +LS
Sbjct: 372 YHDSKVLEYASICLTRIAEAFAPYPEKLDELCNHGLVTQAASLISTSNSGGGQASLSVST 431
Query: 339 YYGLIGLLVKISSGSILNIGSVL--------KDILSTYDLSHGMSSPHMVDGHCNQVHEV 390
Y GLI LL +SGS L ++L KDIL +S S + +Q++E+
Sbjct: 432 YTGLIRLLSTCASGSPLGFRTLLLLGISSILKDILLGSGVSANASVSPALSRPADQIYEI 491
Query: 391 LKLLNELLP----------------------------TSVGDQCVQLVLDKQSFLVDRPD 422
+ L NELLP TS + + + ++ L D+P+
Sbjct: 492 VNLANELLPPLPEGVISLPTSTNALVKGSCQKKSSPSTSGKQEDILKISPREKLLGDQPE 551
Query: 423 LLQNFGMDILPMLIQVVNSGANIFVCYGCLSVINKLVYLSKSDMLIELLKSANIPSFLAG 482
LLQ FG+D+LP+L+Q+ S N + + CLSVI KL+Y S S+M+ L+ NI SFLAG
Sbjct: 552 LLQQFGLDLLPVLVQIYGSSVNGTIRHKCLSVIGKLMYFSSSEMIQSLIGDTNISSFLAG 611
Query: 483 VFTRKDHHVLILALEIAEMILQKLSDTFLNSFVKEGVFFAIDALLTPEKCSQLFPAFSGI 542
V KD VL+ AL++AE++++KL +TF FV+EGV A+D L+ K S P
Sbjct: 612 VLAWKDPQVLVPALQVAEILMEKLPETFSKVFVREGVVHAVDQLVLVGKPSHASPTDKDN 671
Query: 543 QLCP--------------SSSQKCAGREVLRCLCYAFDTGLSSSASEKQSCKLDKDSVHN 588
P ++S E +S + S L +++V +
Sbjct: 672 DCVPGSARSRRYRRRSSNANSDGNQSEEPKNPASLTIGANHNSLDTPTASFML-RETVSS 730
Query: 589 LAKSIITKYFSPELFGSDKGLTDILQDLRSFSAALT---DLMNVCTDNEAHARD------ 639
AK+ KYF + D G+TD L L++ LT D V ++ A
Sbjct: 731 CAKAFKDKYFPSDGGDVDVGVTDDLLHLKNLCTKLTAGIDDHKVKGKGKSKASGPFLGDF 790
Query: 640 ----EEKFYCILHQIMEKLNGREPVSTFEFIESGIVKSLVTYLTNGLYLRDN-AELHIPH 694
EE ++ +I+ +++ + VSTFEFI SG+V +L+ Y + G + ++ +EL++P
Sbjct: 791 SASKEEYLIGVISEILGEISKGDGVSTFEFIGSGVVAALLNYFSCGYFSKEKISELNLPK 850
Query: 695 SDLFVVEKRFEVLARLLLPYSDNLSEDSPVSVLIQKLQSALSSLENFPVILSHSFKLRSS 754
+ +RF+ + LP+ N + P++VLIQKLQ+ALSSLE FPV+LSH + S
Sbjct: 851 LRQEGL-RRFKAFLEVALPFDGNEGKVPPMTVLIQKLQNALSSLERFPVVLSHPSRSLSG 909
Query: 755 YATVPYG-RCIAHPCLRVRFVRGDGETCLSDFSEDLLTVDPFSSLEAIEGYLWPKVTIKE 813
A + G +AHP L++R R GE L D+S +++ +DP +SL A+E +LWP+V E
Sbjct: 910 SARLSSGLSALAHP-LKLRLCRASGEKTLRDYSSNIVLIDPLASLAAVEEFLWPRVQRSE 968
Query: 814 S 814
S
Sbjct: 969 S 969
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 119/219 (54%), Gaps = 22/219 (10%)
Query: 880 KLTFDLDGQKLERTLTLYQAILQKQI---KTDGEVIAGAKL-------WTQVYTIIYRRA 929
KL F G++L R LT+YQA+ Q+Q+ + D + G+ L + +YTI+Y+R
Sbjct: 1216 KLIFTAAGKQLSRHLTIYQAV-QRQLMLDEDDDDRFGGSDLVSSDGSRFNDIYTIMYQRP 1274
Query: 930 MESKCN----------DPKNCVHLHPISDGDEARLHCASFFSSLFACQLAFELDKSSPIY 979
+S+ N P + E++ H AS S+ +L +L+KS+ Y
Sbjct: 1275 -DSQVNRLSVGGASSTTPSKSTKSATTNSSVESQSHRASLLDSILQGELPCDLEKSNSTY 1333
Query: 980 DILFLLKSLEGVNRLTCHLISHERIRAYAEGRFDNLDDLKVEVHSLRQNDFVNSKLTEKL 1039
++L LL+ LEG+N+L L + +AEG+ +LDDL + ++FVNSKLT KL
Sbjct: 1334 NVLALLRVLEGLNQLCPRLRAQTLSDRFAEGKITSLDDLSTTAAKVPLDEFVNSKLTPKL 1393
Query: 1040 EQQMRDSAAVSTGGVPSWCNQLMASCPFLFSLKQGASIF 1078
+Q++D+ A+ +G +PSWC QL +CPFLF + F
Sbjct: 1394 ARQIQDALALCSGSLPSWCYQLTRACPFLFPFQTRRQYF 1432
>sp|F1RCR6|TRIPC_DANRE E3 ubiquitin-protein ligase TRIP12 OS=Danio rerio GN=trip12 PE=2
SV=1
Length = 2026
Score = 143 bits (361), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 156/309 (50%), Gaps = 36/309 (11%)
Query: 52 NDMDTSSSASASSRSEEEPEKDAGY------------GSCDSDDAE-------------P 86
N+ D ++S++A R+EE P+ + G +SDD+E P
Sbjct: 394 NNQDGANSSAA--RTEETPQGASASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLP 451
Query: 87 RH-------RGLRELQRRRSSSDHGKLRSILACLSEDTDPSRHITSLTELCEVLSFAMED 139
H R + R S K + +L L D S+ + + E+C++L E+
Sbjct: 452 PHLFGPFGPRMSQLFHRTIGSGASSKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEE 511
Query: 140 SLSSMMADSLSPVLVKLARHETNPDIMLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQR 199
+L S+ P L+ L + E N DIM A RA+TY+ + PRSS ++V DA+P ++
Sbjct: 512 TLGGFPVKSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAVVV--DAIPVFLEK 569
Query: 200 LKAIEYLDVAEQCLQALEKISRDQPHACLEGGAIMAALTYIDFFSTSIQRVALSTVANIC 259
L+ I+++DVAEQ L ALE +SR A L+ G + L Y++FFS + QR AL+ AN C
Sbjct: 570 LQVIQFIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCC 629
Query: 260 KKLPSECPSHLMEAVPILSNLLQYEDRQLVESVAICLIKIAEQLSQSSQMLDEVCSHGLI 319
+ + + + +++P+L+ L ++D++ VES +C ++ + +L +V S L+
Sbjct: 630 QSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASRDLL 689
Query: 320 NQTTHLLNL 328
LL L
Sbjct: 690 TNIQQLLVL 698
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 73/132 (55%)
Query: 399 PTSVGDQCVQLVLDKQSFLVDRPDLLQNFGMDILPMLIQVVNSGANIFVCYGCLSVINKL 458
P + G V+ + + + P+L + F + +L +V +S A V + CL I ++
Sbjct: 846 PNTGGHLEVRREDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRI 905
Query: 459 VYLSKSDMLIELLKSANIPSFLAGVFTRKDHHVLILALEIAEMILQKLSDTFLNSFVKEG 518
+Y + +++L ++L++ + S +A + + +D +++ +L++AE+++QKL D F F +EG
Sbjct: 906 IYFADAELLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREG 965
Query: 519 VFFAIDALLTPE 530
V + L E
Sbjct: 966 VMHQVKNLAESE 977
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 44/226 (19%)
Query: 880 KLTFDLDGQKLERTLTLYQAILQKQIK-------TDGEV--IAGAKLWTQVYTIIYR--R 928
+L F + L +T+YQA+ Q ++ TD E + A +WT+ +T+ Y+ R
Sbjct: 1377 RLQFYIGEHLLPYNMTVYQAVRQFSLQAEEERESTDDEANPLGRAGIWTKTHTVWYKPVR 1436
Query: 929 AMESKCNDP----KNCVHLHPI------SDGDEARLH---CASFFSSL---FACQLAFEL 972
E C D + P + + H C S + L C +
Sbjct: 1437 EDEEGCKDAVGGKRGRAQTAPTKTSPRNAKKQDELWHEGVCPSVANPLETYLICDPPEGI 1496
Query: 973 DKSSPIYDILFLLKSLEGVNRLTCHLISHERIRAYAEGRFDNLDDLKVEVHSLRQNDFVN 1032
P +++ LL+ L ++R +L +DN ++ + +F+N
Sbjct: 1497 TFDDPSMEVILLLRVLHSISRYWFYL-------------YDNAACKEI----IPTGEFIN 1539
Query: 1033 SKLTEKLEQQMRDSAAVSTGGVPSWCNQLMASCPFLFSLKQGASIF 1078
SKLT K +Q++D + TG +P+W +L +CPF F +F
Sbjct: 1540 SKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLF 1585
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 39/235 (16%)
Query: 583 KDSVHNLAKSIITKYFSPELFGSDKGLTDILQDLRSFSAALTDLMNVCTDNEAHARDEEK 642
K + A + +YF+ E ++LQ L T+ +N+ D+ +E
Sbjct: 1129 KAWIKEQASKFVERYFNSESVDGSNPALNVLQRL----CTATEQLNLQMDSGVECLEE-- 1182
Query: 643 FYCILHQIMEKLNGREPVSTFEFIESGIVKSLVTYLTNGLYLRDNAELHIPHSDLFVVEK 702
+ + VS+FE SG+VK L+ YLT+ N+E D + K
Sbjct: 1183 --------ISSIVSESDVSSFEIQHSGLVKQLLLYLTS------NSERDTISRDERI--K 1226
Query: 703 RF-EVLARLLLPYSD-----NLSEDSPVSVLIQKLQSALSSLENFPVILSHSFK------ 750
RF V +P + + +E+ P+ L+ K+ + LS +E FPV + H F
Sbjct: 1227 RFLHVFFGCPIPGQEPPGRLDPTENGPLLALVHKMNNCLSQMEQFPVKV-HDFPSGNGNG 1285
Query: 751 LRSSYATVPYGRCIAHPCLRVRFVRGDGETCLSDFSEDLLTVDPFSSLEAIEGYL 805
R S A + L+ + R T + + + +DP + ++AIE YL
Sbjct: 1286 SRGSQAL----KFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYL 1336
>sp|E1B7Q7|TRIPC_BOVIN E3 ubiquitin-protein ligase TRIP12 OS=Bos taurus GN=TRIP12 PE=2
SV=2
Length = 1992
Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 153/292 (52%), Gaps = 29/292 (9%)
Query: 61 SASSRSEEEPEKDAGY------GSCDSDDAE-------------PRH-------RGLREL 94
S+++R++E P+ AG G +SDD+E P H R +
Sbjct: 368 SSAARTDETPQGAAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLF 427
Query: 95 QRRRSSSDHGKLRSILACLSEDTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLV 154
R S K + +L L + +D S+ + ++ E+C++L E++L S+ P L+
Sbjct: 428 HRTIGSGASSKAQQLLQGL-QASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALI 486
Query: 155 KLARHETNPDIMLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQ 214
L + E N DIM A RA+TY+ + PRSS ++V DA+P ++L+ I+ +DVAEQ L
Sbjct: 487 TLLQMEHNFDIMNHACRALTYMMEALPRSSAVVV--DAIPVFLEKLQVIQCIDVAEQALT 544
Query: 215 ALEKISRDQPHACLEGGAIMAALTYIDFFSTSIQRVALSTVANICKKLPSECPSHLMEAV 274
ALE +SR A L+ G + L Y++FFS + QR AL+ AN C+ + + + +++
Sbjct: 545 ALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSL 604
Query: 275 PILSNLLQYEDRQLVESVAICLIKIAEQLSQSSQMLDEVCSHGLINQTTHLL 326
P+L+ L ++D++ VES +C ++ + +L +V S L+ LL
Sbjct: 605 PLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLL 656
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 76/129 (58%), Gaps = 8/129 (6%)
Query: 413 KQSFLVDRPDLLQNFGMDILPMLIQVVNSGANIFVCYGCLSVINKLVYLSKSDMLIELLK 472
+ + + P+L ++F + +L +V +S A V + CL I +++Y + +++L ++LK
Sbjct: 820 RAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLK 879
Query: 473 SANIPSFLAGVFTRKDHHVLILALEIAEMILQKLSDTFLNSFVKEGVFFAI------DAL 526
+ + S +A + + +D +++ AL++AE+++QKL D F F +EGV + ++L
Sbjct: 880 NHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESL 939
Query: 527 LT--PEKCS 533
LT P+ C+
Sbjct: 940 LTSPPKACT 948
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 58/237 (24%)
Query: 876 DCKIKLTFDLDGQKLERTLTLYQAILQKQIKTDGE---------VIAGAKLWTQVYTIIY 926
+ + +L F + L +T+YQA+ Q I+ + E + A +WT+ +TI Y
Sbjct: 1339 NVRHRLQFYIGEHLLPYNMTVYQAVRQFSIQAEDERESTDDESNPLGRAGIWTKTHTIWY 1398
Query: 927 RRAMESKCNDPKNCVHLHPISDGDEARLHCASFFSSLFACQLAFELDKSS---------- 976
+ E + ++ K+CV G R A +S + EL
Sbjct: 1399 KPVREDEESN-KDCV------GGKRGRAQTAPTKTSPRNAKKHDELWNDGVCPSVSNPLE 1451
Query: 977 ---------------PIYDILFLLKSLEGVNRLTCHLISHERIRAYAEGRFDNLDDLKVE 1021
P D++ LL+ L V+R +L +DN ++
Sbjct: 1452 VYLIPTAPENITFEDPSLDVILLLRVLHAVSRYWYYL-------------YDNAMCKEI- 1497
Query: 1022 VHSLRQNDFVNSKLTEKLEQQMRDSAAVSTGGVPSWCNQLMASCPFLFSLKQGASIF 1078
+ ++F+NSKLT K +Q++D + TG +P+W +L +CPF F +F
Sbjct: 1498 ---IPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLF 1551
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 103/248 (41%), Gaps = 60/248 (24%)
Query: 583 KDSVHNLAKSIITKYFSPE-LFGSDKGLTDILQDLRSFSAALTDLMNVCTDNEAHARDEE 641
K + A + +YFS E + GS+ L ++LQ L A T+ +N+ D A
Sbjct: 1090 KGWIKEQAHKFVERYFSSENMDGSNPAL-NVLQRL----CAATEQLNLQVDGGAE----- 1139
Query: 642 KFYCILHQIMEKLNGREPVSTFEFIESGIVKSLVTYLTN-------GLYLRDNAELHIPH 694
C++ + + VS+FE SG VK L+ YLT+ +R LH+
Sbjct: 1140 ---CLVE--IRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSREIRLKRFLHVFF 1194
Query: 695 SDLFVVEKRFEVLARLLLPYSDNLSEDSPVSVLIQKLQSALSSLENFPVIL--------- 745
S E+ E + + ++P+ L+ K+ + LS +E FPV +
Sbjct: 1195 SSPLPGEEPIERVEPV---------GNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGT 1245
Query: 746 SHSFKL-RSSYATVPYG----RC--IAHP-CLRVRFVRGDGETCLSDFSEDLLTVDPFSS 797
SF L R S A + +C HP C V+ +G + +DP +
Sbjct: 1246 GGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGP-----------VKIDPLAL 1294
Query: 798 LEAIEGYL 805
++AIE YL
Sbjct: 1295 VQAIERYL 1302
>sp|Q14669|TRIPC_HUMAN E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1
SV=1
Length = 1992
Score = 143 bits (360), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 153/292 (52%), Gaps = 29/292 (9%)
Query: 61 SASSRSEEEPEKDAGY------GSCDSDDAE-------------PRH-------RGLREL 94
S+++R++E P+ AG G +SDD+E P H R +
Sbjct: 368 SSAARTDEAPQGAAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLF 427
Query: 95 QRRRSSSDHGKLRSILACLSEDTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLV 154
R S K + +L L + +D S+ + ++ E+C++L E++L S+ P L+
Sbjct: 428 HRTIGSGASSKAQQLLQGL-QASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALI 486
Query: 155 KLARHETNPDIMLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQ 214
L + E N DIM A RA+TY+ + PRSS ++V DA+P ++L+ I+ +DVAEQ L
Sbjct: 487 TLLQMEHNFDIMNHACRALTYMMEALPRSSAVVV--DAIPVFLEKLQVIQCIDVAEQALT 544
Query: 215 ALEKISRDQPHACLEGGAIMAALTYIDFFSTSIQRVALSTVANICKKLPSECPSHLMEAV 274
ALE +SR A L+ G + L Y++FFS + QR AL+ AN C+ + + + +++
Sbjct: 545 ALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSL 604
Query: 275 PILSNLLQYEDRQLVESVAICLIKIAEQLSQSSQMLDEVCSHGLINQTTHLL 326
P+L+ L ++D++ VES +C ++ + +L +V S L+ LL
Sbjct: 605 PLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLL 656
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 76/129 (58%), Gaps = 8/129 (6%)
Query: 413 KQSFLVDRPDLLQNFGMDILPMLIQVVNSGANIFVCYGCLSVINKLVYLSKSDMLIELLK 472
+ + + P+L ++F + +L +V +S A V + CL I +++Y + +++L ++LK
Sbjct: 820 RAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLK 879
Query: 473 SANIPSFLAGVFTRKDHHVLILALEIAEMILQKLSDTFLNSFVKEGVFFAI------DAL 526
+ + S +A + + +D +++ AL++AE+++QKL D F F +EGV + ++L
Sbjct: 880 NHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESL 939
Query: 527 LT--PEKCS 533
LT P+ C+
Sbjct: 940 LTSPPKACT 948
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 58/237 (24%)
Query: 876 DCKIKLTFDLDGQKLERTLTLYQAILQKQIKTDGE---------VIAGAKLWTQVYTIIY 926
+ + +L F + L +T+YQA+ Q I+ + E + A +WT+ +TI Y
Sbjct: 1339 NVRHRLQFYIGEHLLPYNMTVYQAVRQFSIQAEDERESTDDESNPLGRAGIWTKTHTIWY 1398
Query: 927 RRAMESKCNDPKNCVHLHPISDGDEARLHCASFFSSLFACQLAFELDKSS---------- 976
+ E + ++ K+CV G R A +S + EL
Sbjct: 1399 KPVREDEESN-KDCV------GGKRGRAQTAPTKTSPRNAKKHDELWHDGVCPSVSNPLE 1451
Query: 977 ---------------PIYDILFLLKSLEGVNRLTCHLISHERIRAYAEGRFDNLDDLKVE 1021
P D++ LL+ L ++R +L +DN + E
Sbjct: 1452 VYLIPTPPENITFEDPSLDVILLLRVLHAISRYWYYL-------------YDNA--MCKE 1496
Query: 1022 VHSLRQNDFVNSKLTEKLEQQMRDSAAVSTGGVPSWCNQLMASCPFLFSLKQGASIF 1078
+ + ++F+NSKLT K +Q++D + TG +P+W +L +CPF F +F
Sbjct: 1497 I--IPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLF 1551
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 115/270 (42%), Gaps = 63/270 (23%)
Query: 564 AFDTGLSSSASEKQSCKLDKDSVHNLAK----SIITKYFSPE-LFGSDKGLTDILQDLRS 618
A +GL+ +AS K + +++ + K + +YFS E + GS+ L ++LQ L
Sbjct: 1068 AGGSGLARAAS-KDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPAL-NVLQRL-- 1123
Query: 619 FSAALTDLMNVCTDNEAHARDEEKFYCILHQIMEKLNGREPVSTFEFIESGIVKSLVTYL 678
A T+ +N+ D A C++ + + VS+FE SG VK L+ YL
Sbjct: 1124 --CAATEQLNLQVDGGAE--------CLVE--IRSIVSESDVSSFEIQHSGFVKQLLLYL 1171
Query: 679 TNGLYLRDNAELHIPHSDLFVVEKRF-EVLARLLLPYSDNLSEDSPVS-----VLIQKLQ 732
T+ +E ++ + KRF V LP + + PV L+ K+
Sbjct: 1172 TS------KSEKDAVSREIRL--KRFLHVFFSSPLPGEEPIGRVEPVGNAPLLALVHKMN 1223
Query: 733 SALSSLENFPVIL---------SHSFKL-RSSYATVPYG----RC--IAHP-CLRVRFVR 775
+ LS +E FPV + SF L R S A + +C HP C V+ +
Sbjct: 1224 NCLSQMEQFPVKVHDFPSGNGTGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWK 1283
Query: 776 GDGETCLSDFSEDLLTVDPFSSLEAIEGYL 805
G + +DP + ++AIE YL
Sbjct: 1284 GGP-----------VKIDPLALVQAIERYL 1302
>sp|B4F6W9|TRIPC_XENTR E3 ubiquitin-protein ligase TRIP12 OS=Xenopus tropicalis GN=trip12
PE=2 SV=1
Length = 2056
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 122/210 (58%), Gaps = 2/210 (0%)
Query: 117 TDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLLAVRAITYL 176
TD S+ + ++ E+C++L E++L S+ P L+ L + E N DIM A RA+TY+
Sbjct: 491 TDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHACRALTYM 550
Query: 177 CDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRDQPHACLEGGAIMAA 236
+ PRSS ++V DA+P ++L+ I+ +DVAEQ L ALE +SR A L+ G +
Sbjct: 551 MEALPRSSAVVV--DAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHSKAILQAGGLADC 608
Query: 237 LTYIDFFSTSIQRVALSTVANICKKLPSECPSHLMEAVPILSNLLQYEDRQLVESVAICL 296
L Y++FFS + QR AL+ AN C+ + + + +++P+L+ L ++D++ VES +C
Sbjct: 609 LLYLEFFSINAQRNALAIAANCCQSISPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCF 668
Query: 297 IKIAEQLSQSSQMLDEVCSHGLINQTTHLL 326
++ + +L +V S L+ LL
Sbjct: 669 ARLVDNFQHEENLLQQVASRDLLTNIQQLL 698
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 130/564 (23%), Positives = 222/564 (39%), Gaps = 138/564 (24%)
Query: 567 TGLSSSASEKQSCKLDKDSVHNLAK----SIITKYFSPE-LFGSDKGLTDILQDLRSFSA 621
+GL+ +AS K + +++ + K + +YFS E + GS+ L ++LQ L
Sbjct: 1138 SGLARAAS-KDTISNNRERIRGWIKEQAHKFVERYFSSENMDGSNPAL-NVLQRL----C 1191
Query: 622 ALTDLMNVCTDNEAHARDEEKFYCILHQIMEKLNGREPVSTFEFIESGIVKSLVTYLTNG 681
T+ +N+ D C++ + + VS+FE SG VK L+ YLT+
Sbjct: 1192 NATEQLNLQVDGGVE--------CLVE--IRSIVSESDVSSFEIQHSGFVKQLLLYLTS- 1240
Query: 682 LYLRDNAELHIPHSDLFVVEKRF-EVLARLLLPYSDNLSEDSPVS-----VLIQKLQSAL 735
++ I D+ + KRF V LP + L++ P L+ K+ + L
Sbjct: 1241 -----KSDKDIVSRDIRL--KRFLHVFFGTPLPGEEPLAKLDPTENRHLLALVHKMNNCL 1293
Query: 736 SSLENFPVILSHSFKLRSSYATVPYG----RCIAHPCLRVRFVRGDGETCLSDFSEDLLT 791
S +E FPV + H F S T G + L+ + R T + + +
Sbjct: 1294 SQMEQFPVKV-HDFP--SGNGTGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVK 1350
Query: 792 VDPFSSLEAIE------GYLWPKVTIKESKDVESDCLMDQMNGQPLYLSSNSKSILGESS 845
+DP + ++AIE GY + ++S D SD +D
Sbjct: 1351 IDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEID--------------------- 1389
Query: 846 ESMEHESTSAGLTPVKHDSISSTSGVPKMQDCKIKLTFDLDGQKLERTLTLYQAILQKQI 905
ES+ + ++G V+H +L F + L +T+YQA+ Q I
Sbjct: 1390 ESLAAQFLNSGN--VRH-----------------RLQFYIGDHLLPYNMTVYQAVRQYSI 1430
Query: 906 KTDGE---------VIAGAKLWTQVYTIIYR--RAMESKCND-----------------P 937
+T+ E + A +WT+ +TI Y+ R E D P
Sbjct: 1431 QTEEERESTDDESNPLGRAGIWTKTHTIWYKPVREEEESAKDTVGGKRGRAQTAPTKTSP 1490
Query: 938 KNCVHLHPISDGDEARLHCASFFSSLFACQLAFELDK---SSPIYDILFLLKSLEGVNRL 994
+N + G + C + L ++ + P D++ LL+ L ++R
Sbjct: 1491 RNSKKHDELWHGKDGV--CPRILNPLEVYLISGPPENITFDDPSLDVVILLRVLHAISRY 1548
Query: 995 TCHLISHERIRAYAEGRFDNLDDLKVEVHSLRQNDFVNSKLTEKLEQQMRDSAAVSTGGV 1054
+L +DN V + ++F NSKLT K +Q++D + TG +
Sbjct: 1549 WYYL-------------YDN----AVCKEIIPTSEFNNSKLTAKANRQLQDPLVIMTGNI 1591
Query: 1055 PSWCNQLMASCPFLFSLKQGASIF 1078
P+W +L SCPF F +F
Sbjct: 1592 PTWLTELGKSCPFFFPFDTRQMLF 1615
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 76/129 (58%), Gaps = 8/129 (6%)
Query: 413 KQSFLVDRPDLLQNFGMDILPMLIQVVNSGANIFVCYGCLSVINKLVYLSKSDMLIELLK 472
+ + + P+L ++F + +L +V +S A V + CL I +++Y + +++L ++LK
Sbjct: 889 RAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLK 948
Query: 473 SANIPSFLAGVFTRKDHHVLILALEIAEMILQKLSDTFLNSFVKEGVFFAI------DAL 526
+ + S +A + + +D +++ AL++AE+++QKL D F F +EGV + +AL
Sbjct: 949 NHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEAL 1008
Query: 527 LT--PEKCS 533
LT P+ C+
Sbjct: 1009 LTSPPKVCT 1017
>sp|G5E870|TRIPC_MOUSE E3 ubiquitin-protein ligase TRIP12 OS=Mus musculus GN=Trip12 PE=1
SV=1
Length = 2025
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 122/210 (58%), Gaps = 2/210 (0%)
Query: 117 TDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLLAVRAITYL 176
+D S+ + ++ E+C++L E++L S+ P L+ L + E N DIM A RA+TY+
Sbjct: 455 SDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHACRALTYM 514
Query: 177 CDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRDQPHACLEGGAIMAA 236
+ PRSS ++V DA+P ++L+ I+ +DVAEQ L ALE +SR A L+ G +
Sbjct: 515 MEALPRSSAVVV--DAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHSKAILQAGGLADC 572
Query: 237 LTYIDFFSTSIQRVALSTVANICKKLPSECPSHLMEAVPILSNLLQYEDRQLVESVAICL 296
L Y++FFS + QR AL+ AN C+ + + + +++P+L+ L ++D++ VES +C
Sbjct: 573 LLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCF 632
Query: 297 IKIAEQLSQSSQMLDEVCSHGLINQTTHLL 326
++ + +L +V S L+ LL
Sbjct: 633 ARLVDNFQHEENLLQQVASKDLLTNVQQLL 662
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 76/129 (58%), Gaps = 8/129 (6%)
Query: 413 KQSFLVDRPDLLQNFGMDILPMLIQVVNSGANIFVCYGCLSVINKLVYLSKSDMLIELLK 472
+ + + P+L ++F + +L +V +S A V + CL I +++Y + +++L ++LK
Sbjct: 853 RAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLK 912
Query: 473 SANIPSFLAGVFTRKDHHVLILALEIAEMILQKLSDTFLNSFVKEGVFFAI------DAL 526
+ + S +A + + +D +++ AL++AE+++QKL D F F +EGV + ++L
Sbjct: 913 NHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESL 972
Query: 527 LT--PEKCS 533
LT P+ C+
Sbjct: 973 LTSPPKACT 981
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 98/235 (41%), Gaps = 54/235 (22%)
Query: 876 DCKIKLTFDLDGQKLERTLTLYQAILQKQIKTDGE---------VIAGAKLWTQVYTIIY 926
+ + +L F + L +T+YQA+ Q ++ + E + A +WT+ +TI Y
Sbjct: 1372 NVRHRLQFYIGEHLLPYNMTVYQAVRQFSVQAEDERESTDDESNPLGRAGIWTKTHTIWY 1431
Query: 927 RRAMESKCNDPKNCV-------HLHPI-SDGDEARLH--------CASFFSSLFAC---- 966
+ E + K+CV P + A+ H C S + L
Sbjct: 1432 KPVREDE-ESTKDCVGGKRGRAQTAPTKTSPRNAKKHDELWHDGVCPSVANPLEVYLIPT 1490
Query: 967 ---QLAFELDKSSPIYDILFLLKSLEGVNRLTCHLISHERIRAYAEGRFDNLDDLKVEVH 1023
+ FE P D++ LL+ L ++R +L +DN ++
Sbjct: 1491 PPENITFE----DPSLDVILLLRVLHAISRYWYYL-------------YDNAMCKEI--- 1530
Query: 1024 SLRQNDFVNSKLTEKLEQQMRDSAAVSTGGVPSWCNQLMASCPFLFSLKQGASIF 1078
+ ++F+NSKLT K +Q++D + TG +P+W +L +CPF F +F
Sbjct: 1531 -IPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLF 1584
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 103/251 (41%), Gaps = 66/251 (26%)
Query: 583 KDSVHNLAKSIITKYFSPE-LFGSDKGLTDILQDLRSFSAALTDLMNVCTDNEAHARDEE 641
K + A + +YFS E + GS+ L ++LQ L A T+ +N+ D A
Sbjct: 1123 KGWIKEQAHKFVERYFSSENMDGSNPAL-NVLQRL----CAATEQLNLQVDGGAE----- 1172
Query: 642 KFYCILHQIMEKLNGREPVSTFEFIESGIVKSLVTYLTN-------GLYLRDNAELHIPH 694
C++ + + VS+FE SG VK L+ YLT+ G +R LH+
Sbjct: 1173 ---CLVE--IRSIVSESDVSSFEIQHSGFVKQLLLYLTSKNEKDAVGREIRLKRFLHVFF 1227
Query: 695 SDLFVVEK---RFEVLARLLLPYSDNLSEDSPVSVLIQKLQSALSSLENFPVIL------ 745
S E+ R E + +P+ L+ K+ + LS +E FPV +
Sbjct: 1228 SSPLPGEEPVGRVEPVGH------------APLLALVHKMNNCLSQMEQFPVKVHDFPSG 1275
Query: 746 ---SHSFKL-RSSYATVPYG----RC--IAHP-CLRVRFVRGDGETCLSDFSEDLLTVDP 794
SF L R S A + +C HP C V+ +G + +DP
Sbjct: 1276 NGAGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGP-----------VKIDP 1324
Query: 795 FSSLEAIEGYL 805
+ ++AIE YL
Sbjct: 1325 LALVQAIERYL 1335
>sp|F1LP64|TRIPC_RAT E3 ubiquitin-protein ligase TRIP12 OS=Rattus norvegicus GN=Trip12
PE=2 SV=1
Length = 2025
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 122/210 (58%), Gaps = 2/210 (0%)
Query: 117 TDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLLAVRAITYL 176
+D S+ + ++ E+C++L E++L S+ P L+ L + E N DIM A RA+TY+
Sbjct: 455 SDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHACRALTYM 514
Query: 177 CDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRDQPHACLEGGAIMAA 236
+ PRSS ++V DA+P ++L+ I+ +DVAEQ L ALE +SR A L+ G +
Sbjct: 515 MEALPRSSAVVV--DAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHSKAILQAGGLADC 572
Query: 237 LTYIDFFSTSIQRVALSTVANICKKLPSECPSHLMEAVPILSNLLQYEDRQLVESVAICL 296
L Y++FFS + QR AL+ AN C+ + + + +++P+L+ L ++D++ VES +C
Sbjct: 573 LLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCF 632
Query: 297 IKIAEQLSQSSQMLDEVCSHGLINQTTHLL 326
++ + +L +V S L+ LL
Sbjct: 633 ARLVDNFQHEENLLQQVASKDLLTNVQQLL 662
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 76/129 (58%), Gaps = 8/129 (6%)
Query: 413 KQSFLVDRPDLLQNFGMDILPMLIQVVNSGANIFVCYGCLSVINKLVYLSKSDMLIELLK 472
+ + + P+L ++F + +L +V +S A V + CL I +++Y + +++L ++LK
Sbjct: 853 RAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLK 912
Query: 473 SANIPSFLAGVFTRKDHHVLILALEIAEMILQKLSDTFLNSFVKEGVFFAI------DAL 526
+ + S +A + + +D +++ AL++AE+++QKL D F F +EGV + ++L
Sbjct: 913 NHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESL 972
Query: 527 LT--PEKCS 533
LT P+ C+
Sbjct: 973 LTSPPKACT 981
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 98/235 (41%), Gaps = 54/235 (22%)
Query: 876 DCKIKLTFDLDGQKLERTLTLYQAILQKQIKTDGE---------VIAGAKLWTQVYTIIY 926
+ + +L F + L +T+YQA+ Q ++ + E + A +WT+ +TI Y
Sbjct: 1372 NVRHRLQFYIGEHLLPYNMTVYQAVRQFSVQAEDERESTDDESNPLGRAGIWTKTHTIWY 1431
Query: 927 RRAMESKCNDPKNCV-------HLHPI-SDGDEARLH--------CASFFSSLFAC---- 966
+ E + K+CV P + A+ H C S + L
Sbjct: 1432 KPVREDE-ESSKDCVGGKRGRAQTAPTKTSPRNAKKHDELWHDGVCPSVANPLEVYLIPT 1490
Query: 967 ---QLAFELDKSSPIYDILFLLKSLEGVNRLTCHLISHERIRAYAEGRFDNLDDLKVEVH 1023
+ FE P D++ LL+ L ++R +L +DN ++
Sbjct: 1491 PPENITFE----DPSLDVILLLRVLHAISRYWYYL-------------YDNAMCKEI--- 1530
Query: 1024 SLRQNDFVNSKLTEKLEQQMRDSAAVSTGGVPSWCNQLMASCPFLFSLKQGASIF 1078
+ ++F+NSKLT K +Q++D + TG +P+W +L +CPF F +F
Sbjct: 1531 -IPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLF 1584
Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 102/248 (41%), Gaps = 60/248 (24%)
Query: 583 KDSVHNLAKSIITKYFSPE-LFGSDKGLTDILQDLRSFSAALTDLMNVCTDNEAHARDEE 641
K + A + +YFS E + GS+ L ++LQ L A T+ +N+ D A
Sbjct: 1123 KGWIKEQAHKFVERYFSSENMDGSNPAL-NVLQRL----CAATEQLNLQVDGGAE----- 1172
Query: 642 KFYCILHQIMEKLNGREPVSTFEFIESGIVKSLVTYLTNGLYLRDNAELHIPHSDLFVVE 701
C++ + + VS+FE SG VK L+ YLT+ +E ++ +
Sbjct: 1173 ---CLVE--IRSIVSESDVSSFEIQHSGFVKQLLLYLTS------KSEKDAVSREIRL-- 1219
Query: 702 KRF-EVLARLLLPYSDNLSEDSPVS-----VLIQKLQSALSSLENFPVILSHSFKL---- 751
KRF V LP + + PV L+ K+ + LS +E FPV + H F
Sbjct: 1220 KRFLHVFFSSPLPGEEPVGRVEPVGHAPLLALVHKMNNCLSQMEQFPVKV-HDFPSGNGS 1278
Query: 752 -------RSSYATVPYG----RC--IAHP-CLRVRFVRGDGETCLSDFSEDLLTVDPFSS 797
R S A + +C HP C V+ +G + +DP +
Sbjct: 1279 GGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGP-----------VKIDPLAL 1327
Query: 798 LEAIEGYL 805
++AIE YL
Sbjct: 1328 VQAIERYL 1335
>sp|Q10435|YDE1_SCHPO Probable ubiquitin fusion degradation protein C12B10.01c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC12B10.01c PE=3 SV=2
Length = 1647
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 7/225 (3%)
Query: 109 ILACLSEDTDPSRHITSLTELCEVLSFAMEDSLSSMMA-DSLSPVLVKL--ARH----ET 161
+L + + +DP+ + SL EL E + + ED L + + DS ++ R+ E
Sbjct: 373 LLEGIKDFSDPTVQMLSLQELSEAFAMSTEDMLVGLFSTDSYIAAFSEILSGRNYDFGEV 432
Query: 162 NPDIMLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISR 221
+ +ML ++ + + P + V LC+R+ ++Y+D+AEQ L LE++S+
Sbjct: 433 SIQLMLSCTTCVSNMMEALPLCMAKIAYSPIVRILCERMFDMQYIDIAEQALGVLERLSK 492
Query: 222 DQPHACLEGGAIMAALTYIDFFSTSIQRVALSTVANICKKLPSECPSHLMEAVPILSNLL 281
D LE ++AAL Y DFF T++QR A+S AN CK L S E +P+LSN+L
Sbjct: 493 DFGICILEHRGMLAALQYFDFFYTTVQRTAISLAANCCKFLDESNASAAEEIIPLLSNIL 552
Query: 282 QYEDRQLVESVAICLIKIAEQLSQSSQMLDEVCSHGLINQTTHLL 326
Q D +V CL I E L S +++ + S LI + L
Sbjct: 553 QSSDTIVVSKAYSCLETIIESLKTSPNIIETIISEDLITTIVNAL 597
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 144/363 (39%), Gaps = 86/363 (23%)
Query: 721 DSPVSVLIQKLQSALSSLENFPV-------------ILSHSFKLRSSYATVPYGRCIAHP 767
+ P+ LI LQ+ LS++ENF + + S FKLR +A P
Sbjct: 937 NGPLVSLIFCLQNLLSTVENFQLSTLPPDTENAVDHVFSRQFKLR----------LMALP 986
Query: 768 CLRVRFVRGDGETCLSDFSEDLLTVDPFSSLEAIEGYLWPKVTIKESKDVESDCLMDQMN 827
R+R F +++++ +++ ++ YL +++++ L + +
Sbjct: 987 GSRIR----------PPFRSLVVSINGLATIRTLDNYLHSRISVRNETGRRFSILREAGS 1036
Query: 828 GQPLYLSSNSKSILGESSESMEHESTSAGLTPVKHDSISSTSGVPKMQDCKIKLTFDLDG 887
+ +S +S++ G+ ++SM ++ + P + S++S + F L G
Sbjct: 1037 LRES-MSGSSRNSSGDYTDSMSQDAPNHTTEPSERRDSSTSSHFEE------HFVFSLMG 1089
Query: 888 QKLERTLTLYQAILQKQIKTDGEVIAGAKLWTQVYTIIYRRAMESKC--NDPKNCVHLHP 945
+K+ R T+++ + + +D + W I Y E C ND K ++
Sbjct: 1090 KKVPRNKTIFRILYEYIQLSDDHTLD--DFWKTPVPIFYG---EPDCIHNDMKGELNYEN 1144
Query: 946 ISDGDEARLHCASFFSSLFACQLAFELDKSSPIYDILFLLKSLEGVNRLTCHLISHERIR 1005
++G F ++ I +IL LL L R L + R
Sbjct: 1145 ETEG--------------------FSIN----IREILDLLSILYYGIRDVHTLFPDKHFR 1180
Query: 1006 AYAEGRFDNLDDLKVEVHSLRQNDFVNSKLTEKLEQQMRDSAAVSTGGVPSWCNQLMASC 1065
G +N+ DF N KL+ KL +Q+ + V G +PSWC L ++
Sbjct: 1181 ----GNIENI-----------LTDFSNWKLSAKLNRQLEEQQLVVHGCLPSWCISLTSAY 1225
Query: 1066 PFL 1068
PFL
Sbjct: 1226 PFL 1228
>sp|P33202|UFD4_YEAST Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UFD4 PE=1 SV=1
Length = 1483
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 186/454 (40%), Gaps = 78/454 (17%)
Query: 118 DPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLV-----------KLARHETNPDIM 166
DP + SL EL E + ++ M+ D + P+ K+ R E ++
Sbjct: 185 DPYIAMESLKELSENILM-----MNQMVVDRIIPMETLIGNIAAILSDKILREEL--ELQ 237
Query: 167 LLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRDQPHA 226
+ A R + L ++ P S + V +P L +L I Y+D+AEQ L+ +E ISR
Sbjct: 238 MQACRCMYNLFEVCPESISIAVDEHVIPILQGKLVEISYIDLAEQVLETVEYISRVHGRD 297
Query: 227 CLEGGAIMAALTYIDFFSTSIQRVALSTVANICKKLPSECPSHLMEAVPILSNLLQYEDR 286
L+ G + + + DF + QR A++ V+N C + ++ ++E +P L +
Sbjct: 298 ILKTGQLSIYVQFFDFLTIHAQRKAIAIVSNACSSIRTDDFKTIVEVLPTLKPIFSNATD 357
Query: 287 QLVESVAICLIKIAEQLSQSSQMLDEVCS--HGLINQTTHLLNLNSRTTLSQPIYYGLIG 344
Q + L++ + +C HG +++ L +L+ + Q +
Sbjct: 358 QPI-------------LTRLVNAMYGICGALHG-VDKFETLFSLDLIERIVQLVSIQDTP 403
Query: 345 LLVKISSGSILNIGSVLKDILS-------------TYDLSHGMSSPHMVDGHCNQVHEVL 391
L K+ IL + ++ D+LS T H SP+ +HE L
Sbjct: 404 LENKLKCLDILTVLAMSSDVLSRELREKTDIVDMATRSFQHYSKSPNA------GLHETL 457
Query: 392 KLLNELLPTSVGDQCVQLV---------LDKQSFLVDRPDLLQNFGMD-----ILPMLIQ 437
+ L S+ V L DK + DR + D ++P+L++
Sbjct: 458 IYVPNSLLISISRFIVVLFPPEDERILSADKYTGNSDRGVISNQEKFDSLVQCLIPILVE 517
Query: 438 VVNSGANI----FVCYGCLSV---INKLVYLSKSDMLIELLKS----ANIPSFLAGVFTR 486
+ + A+ +V L V IN + +D LI+L+ S S G ++
Sbjct: 518 IYTNAADFDVRRYVLIALLRVVSCINNSTAKAINDQLIKLIGSILAQKETASNANGTYSS 577
Query: 487 KDHHVLILALEIAEMILQKLSDTFLNSFVKEGVF 520
+ +L+ L + ++I +K S+ F S +EG+F
Sbjct: 578 EAGTLLVGGLSLLDLICKKFSELFFPSIKREGIF 611
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 1024 SLRQNDFVNSKLTEKLEQQMRDSAAVSTGGVPSWCNQLMASCPFLF 1069
++ + F+NSKL+ KL +Q+ + V++G +P W L PFLF
Sbjct: 1008 GVKSDSFINSKLSAKLARQLDEPLVVASGALPDWSLFLTRRFPFLF 1053
>sp|Q69ZR2|HECD1_MOUSE E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus GN=Hectd1 PE=1
SV=2
Length = 2618
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 151 PVLVKLARHETNPD-IMLLAVRAITYLCDIFPRSSGLLVRHD-AVPALCQRLKAIEY--- 205
P L K+ E+ PD ++ + RAITY D+ + +V D A+ ALC RL +E
Sbjct: 55 PALCKIFLDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVVVELNNR 114
Query: 206 --LDVAEQCLQALEKISRDQPHACLEGGAIMAALTYIDFFSTSIQR----VALSTVANIC 259
D+AEQC++ LE I + A E G + LT+I + + A++ V+ +C
Sbjct: 115 TSRDLAEQCVKVLELICTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLC 174
Query: 260 KKLPSECPSHLMEAVPILSNLLQYEDRQLVESVAICLIKIAEQLSQSSQMLDEVCSHGLI 319
K+ + S L V LS+LL++ED Q+ + C +A++ ++ + HGL
Sbjct: 175 GKMEPQ-DSSLEICVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLT 233
Query: 320 NQ 321
+
Sbjct: 234 EE 235
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 1028 NDFVNSKLTEKLEQQMRDSAAVSTGGVPSWCNQLMASCPFLFSLK 1072
++F + K+T K+ QQ+ + A+++G +P WC QL + CPFL +
Sbjct: 2039 DEFTSKKITTKILQQIEEPLALASGALPDWCEQLTSKCPFLIPFE 2083
>sp|Q9ULT8|HECD1_HUMAN E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens GN=HECTD1 PE=1
SV=3
Length = 2610
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 151 PVLVKLARHETNPD-IMLLAVRAITYLCDIFPRSSGLLVRHD-AVPALCQRLKAIEY--- 205
P L K+ E+ PD ++ + RAITY D+ + +V D A+ ALC RL +E
Sbjct: 55 PALCKIFLDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVVVELNNR 114
Query: 206 --LDVAEQCLQALEKISRDQPHACLEGGAIMAALTYIDFFSTSIQR----VALSTVANIC 259
D+AEQC++ LE I + A E G + LT+I + + A++ V+ +C
Sbjct: 115 TSRDLAEQCVKVLELICTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLC 174
Query: 260 KKLPSECPSHLMEAVPILSNLLQYEDRQLVESVAICLIKIAEQLSQSSQMLDEVCSHGLI 319
K+ + S L V LS+LL++ED Q+ + C +A++ ++ + HGL
Sbjct: 175 GKMEPQ-DSSLEICVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLT 233
Query: 320 NQ 321
+
Sbjct: 234 EE 235
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 1028 NDFVNSKLTEKLEQQMRDSAAVSTGGVPSWCNQLMASCPFLFSLK 1072
++F + K+T K+ QQ+ + A+++G +P WC QL + CPFL +
Sbjct: 2034 DEFTSKKITTKILQQIEEPLALASGALPDWCEQLTSKCPFLIPFE 2078
>sp|Q96321|IMA1_ARATH Importin subunit alpha-1 OS=Arabidopsis thaliana GN=KAP1 PE=1 SV=2
Length = 532
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 124/293 (42%), Gaps = 15/293 (5%)
Query: 44 NSTPETHHNDMDTSSSASASSRSEEEPEKDAGYGSCDSDDAEPRHRGLRELQRRRSSSDH 103
N+ E N + A R E+ + + + R G++ LQ S+S
Sbjct: 6 NAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLMKKRREGMQALQGFPSASAA 65
Query: 104 G------KLRSILACLSEDTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLA 157
L+ ++A + D DP+ + S T+ ++LS + +++ + P V+
Sbjct: 66 SVDKKLDSLKDMVAGVWSD-DPALQLESTTQFRKLLSIERSPPIEEVISAGVVPRFVEFL 124
Query: 158 RHETNPDIMLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALE 217
+ E P I A A+T + + +++ H+AVP Q L A DV EQ + AL
Sbjct: 125 KKEDYPAIQFEAAWALTNIASGTSDHTKVVIDHNAVPIFVQLL-ASPSDDVREQAVWALG 183
Query: 218 KISRDQPHA---CLEGGAIMAALTYIDFFST-SIQRVALSTVANICKKLPSECPSHLMEA 273
++ D P L GA++ L ++ + S+ R A T++N C+ P + A
Sbjct: 184 NVAGDSPRCRDLVLGCGALLPLLNQLNEHAKLSMLRNATWTLSNFCRGKPQPHFDQVKPA 243
Query: 274 VPILSNLLQYEDRQLVESVAICLIKIAEQLSQSSQMLDEVCSHGLINQTTHLL 326
+P L L+ +D +++ L +++ + Q V G++ + LL
Sbjct: 244 LPALERLIHSDDEEVLTDACWALSYLSDGTNDKIQT---VIQAGVVPKLVELL 293
>sp|Q19969|IMA3_CAEEL Importin subunit alpha-3 OS=Caenorhabditis elegans GN=ima-3 PE=1
SV=2
Length = 514
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 10/222 (4%)
Query: 102 DHGKLRSILACLSEDTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHET 161
D LR +A ++ +DP+ +T++ + ++LS + ++ + PVLV+ T
Sbjct: 63 DANLLRLTVAA-AQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQ-CLSST 120
Query: 162 NPDIMLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISR 221
+P++ A A+T + + +V AVP Q L + L+V EQ + AL I
Sbjct: 121 DPNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLL-SCGNLNVCEQSVWALGNIIG 179
Query: 222 DQPH---ACLEGGAIMAALTYID-FFSTSIQRVALSTVANICK-KLPSECPSHLMEAVPI 276
D PH CLE G + L +I+ R + N+C+ K P+ P+ + +P
Sbjct: 180 DGPHFRDYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPA 239
Query: 277 LSNLLQYEDRQLVESVAICLIKIAEQLSQSSQMLDE--VCSH 316
LS L+ ++D ++ L + + ++ QM+ E V +H
Sbjct: 240 LSLLIHHQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTH 281
>sp|O04294|IMA2_ARATH Importin subunit alpha-2 OS=Arabidopsis thaliana GN=KAP2 PE=1 SV=2
Length = 531
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 10/230 (4%)
Query: 109 ILACLSEDTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLL 168
+ SED++ T+L L ++LS ++ ++ + P +VK + P +
Sbjct: 81 VAGIWSEDSNSQLEATNL--LRKLLSIEQNPPINEVVQSGVVPRVVKFLSRDDFPKLQFE 138
Query: 169 AVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRDQPHA-- 226
A A+T + ++ +++ AVP Q L + DV EQ + AL ++ D P
Sbjct: 139 AAWALTNIASGTSENTNVIIESGAVPIFIQLLSSASE-DVREQAVWALGNVAGDSPKCRD 197
Query: 227 -CLEGGAIMAALT-YIDFFSTSIQRVALSTVANICKKLPSECPSHLMEAVPILSNLLQYE 284
L GA+ L+ + + S+ R A T++N C+ P A+P+L L+Q
Sbjct: 198 LVLSYGAMTPLLSQFNENTKLSMLRNATWTLSNFCRGKPPPAFEQTQPALPVLERLVQSM 257
Query: 285 DRQLVESVAICLIKIAEQLSQSSQMLDEVCSHGLINQTTHLLNLNSRTTL 334
D +++ L +++ S+ + V G++ + LL +S + L
Sbjct: 258 DEEVLTDACWALSYLSD---NSNDKIQAVIEAGVVPRLIQLLGHSSPSVL 304
>sp|O22478|IMA_SOLLC Importin subunit alpha OS=Solanum lycopersicum PE=2 SV=2
Length = 527
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 114/285 (40%), Gaps = 13/285 (4%)
Query: 44 NSTPETHHNDMDTSSSASASSRSEEEPEKDAGYGSCDSDDAEPRHRGLRELQRRRSSSDH 103
NS E + + A R E+ + + + + R GL + Q+ S++
Sbjct: 6 NSRTEARRSRYKVAVDAEEGRRRREDNMVEIRKNKREENLLKKRREGLLQAQQFPSTAAV 65
Query: 104 GKLRSILACLSE------DTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLA 157
L L L E D S + T+ ++LS + ++ + P V+
Sbjct: 66 SHLDKKLETLPELIAGVWSDDSSLQLECTTQFRKLLSIERNPPIEEVIQSGVVPRFVEFL 125
Query: 158 RHETNPDIMLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALE 217
+ P + A A+T + ++ +++ + +VP RL + DV EQ + AL
Sbjct: 126 ARDDYPQLQFEAAWALTNIASGTSENTKVVIDYGSVPIFI-RLLSSPSDDVREQAVWALG 184
Query: 218 KISRDQPHA---CLEGGAIMAALT-YIDFFSTSIQRVALSTVANICKKLPSECPSHLMEA 273
I+ D P L GA++A L + + S+ R A T++N C+ P A
Sbjct: 185 NIAGDSPKYRDLVLGHGALVALLAQFNEQAKLSMLRNATWTLSNFCRGKPQPLFEQTKAA 244
Query: 274 VPILSNLLQYEDRQLVESVAICLIKIAEQLSQSSQMLDE--VCSH 316
+P L L+ D +++ L +++ + Q + E VCS
Sbjct: 245 LPTLGRLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCSR 289
>sp|Q71VM4|IMA1A_ORYSJ Importin subunit alpha-1a OS=Oryza sativa subsp. japonica
GN=Os01g0253300 PE=1 SV=2
Length = 526
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 5/176 (2%)
Query: 118 DPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLLAVRAITYLC 177
D + + + T+ ++LS + ++ + P V+ E P + A A+T +
Sbjct: 85 DNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIA 144
Query: 178 DIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRDQPHA---CLEGGAIM 234
++ +++ H AVP + L + DV EQ + AL ++ D P L GA++
Sbjct: 145 SGTSENTKVVIDHGAVPIFVKLLGS-SSDDVREQAVWALGNVAGDSPKCRDLVLANGALL 203
Query: 235 AALTYIDFFST-SIQRVALSTVANICKKLPSECPSHLMEAVPILSNLLQYEDRQLV 289
L ++ + S+ R A T++N C+ P A+P L+ L+ D +++
Sbjct: 204 PLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSNDEEVL 259
>sp|Q76P29|IMAB_DICDI Importin subunit alpha-B OS=Dictyostelium discoideum
GN=DDB_G0272318 PE=3 SV=1
Length = 516
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 115/258 (44%), Gaps = 37/258 (14%)
Query: 65 RSEEEPEKDAGYGSCDSDDAEPRH--------RGLRE--LQRRRSSSDHG---------- 104
RS++E K S DSD++ + + RE L ++R+ + G
Sbjct: 3 RSKQETRKSQYKKSIDSDESRRKREEASLSIRKNKREESLLKKRTQAVPGSTPVKVDSLI 62
Query: 105 -----KLRSILACLSEDTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARH 159
+L S++A ++ + +P + S T ++LS + ++ + P LVK
Sbjct: 63 NQRLEQLPSLVAEINSE-NPDLILKSTTAFRKLLSIEKSPPIEEVIKTGIVPRLVKFLYM 121
Query: 160 ETNPDIMLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKI 219
+ P + A A+T + P + +++ + A+ L + + DV EQ + AL I
Sbjct: 122 QDFPQLQFEAAWALTNIASGTPEQTRVVIENGAIQVFVLLLSS-PHDDVREQAVWALGNI 180
Query: 220 SRDQPHAC----LEGGAIMAALTYID---FFSTSIQRVALSTVANICKKLPSECPSHLME 272
+ D H C L A+ L+ + S+ R A T++N C+ P + P ++
Sbjct: 181 AGDS-HYCRDLVLSHNALPPLLSLLQNPAAIKVSMVRNATWTLSNFCRGKP-QPPFEIVR 238
Query: 273 A-VPILSNLLQYEDRQLV 289
A +P+L+ L+ Y+D +++
Sbjct: 239 ASLPVLAKLIYYQDEEVL 256
>sp|P52292|IMA2_HUMAN Importin subunit alpha-2 OS=Homo sapiens GN=KPNA2 PE=1 SV=1
Length = 529
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 151 PVLVKLARHETNPDIMLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAE 210
P LV+L H+ +P+++ AI+YL D G++V+ VP L + L A E L +
Sbjct: 254 PTLVRLLHHD-DPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASE-LPIVT 311
Query: 211 QCLQALEKI---SRDQPHACLEGGAIMAALTYIDFFSTSIQRVALSTVANIC 259
L+A+ I + +Q ++ GA+ + + T+IQ+ A T++NI
Sbjct: 312 PALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 363
>sp|O35343|IMA4_MOUSE Importin subunit alpha-4 OS=Mus musculus GN=Kpna4 PE=2 SV=1
Length = 521
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 159/391 (40%), Gaps = 56/391 (14%)
Query: 131 EVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLLAVRAITYLCDIFPRSSGLLVRH 190
++LS + ++ + P+LV + NP + A A+T + + +V+
Sbjct: 97 KLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQS 156
Query: 191 DAVPALCQRLKAIEYLDVAEQCLQALEKISRDQPHA---CLEGGAIMAALTYID-FFSTS 246
+AVP L RL + +V EQ + AL I D P + G + L++I +
Sbjct: 157 NAVP-LFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPIT 215
Query: 247 IQRVALSTVANICK-KLPSECPSHLMEAVPILSNLLQYEDRQLVESVAICLIKIAEQLSQ 305
R + N+C+ K P + E +P L L+ + D ++ L + + ++
Sbjct: 216 FLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLTDAGNE 275
Query: 306 SSQMLDEVCSHGLINQTTHLLNLNSRTTLSQPIYYGLIGLLVKISSGSILNIGSVLKD-- 363
QM V G++ HL+ L S VK+ + ++ +G+++
Sbjct: 276 QIQM---VIDSGIV---PHLVPLLSHQE-------------VKVQTAALRAVGNIVTGTD 316
Query: 364 -----ILSTYDLSHGMSSPHMVDGHCNQVH-EVLKLLNELLPTSVGDQCVQLVLDKQSFL 417
+L+ LSH P ++ +++ E + L+ + T+ Q VQ V+D
Sbjct: 317 EQTQVVLNCDALSH---FPALLTHPKEKINKEAVWFLSNI--TAGNQQQVQAVIDA---- 367
Query: 418 VDRPDLLQNFGMDILPMLIQVVNSGANIFVCYGCLSVINKLVYLSKSDMLIELLKSANIP 477
+++PM+I +++ G + I+ L + D + L++ IP
Sbjct: 368 ------------NLVPMIIHLLDKG-DFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIP 414
Query: 478 SFLAGVFTRKDHHVLILALEIAEMILQKLSD 508
F + T KD V+ + L+ IL+ D
Sbjct: 415 PF-CNLLTVKDAQVVQVVLDGLSNILKMAED 444
>sp|O00629|IMA4_HUMAN Importin subunit alpha-4 OS=Homo sapiens GN=KPNA4 PE=1 SV=1
Length = 521
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 159/391 (40%), Gaps = 56/391 (14%)
Query: 131 EVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLLAVRAITYLCDIFPRSSGLLVRH 190
++LS + ++ + P+LV + NP + A A+T + + +V+
Sbjct: 97 KLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQS 156
Query: 191 DAVPALCQRLKAIEYLDVAEQCLQALEKISRDQPHA---CLEGGAIMAALTYID-FFSTS 246
+AVP L RL + +V EQ + AL I D P + G + L++I +
Sbjct: 157 NAVP-LFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPIT 215
Query: 247 IQRVALSTVANICK-KLPSECPSHLMEAVPILSNLLQYEDRQLVESVAICLIKIAEQLSQ 305
R + N+C+ K P + E +P L L+ + D ++ L + + ++
Sbjct: 216 FLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLTDAGNE 275
Query: 306 SSQMLDEVCSHGLINQTTHLLNLNSRTTLSQPIYYGLIGLLVKISSGSILNIGSVLKD-- 363
QM V G++ HL+ L S VK+ + ++ +G+++
Sbjct: 276 QIQM---VIDSGIV---PHLVPLLSHQE-------------VKVQTAALRAVGNIVTGTD 316
Query: 364 -----ILSTYDLSHGMSSPHMVDGHCNQVH-EVLKLLNELLPTSVGDQCVQLVLDKQSFL 417
+L+ LSH P ++ +++ E + L+ + T+ Q VQ V+D
Sbjct: 317 EQTQVVLNCDALSH---FPALLTHPKEKINKEAVWFLSNI--TAGNQQQVQAVIDA---- 367
Query: 418 VDRPDLLQNFGMDILPMLIQVVNSGANIFVCYGCLSVINKLVYLSKSDMLIELLKSANIP 477
+++PM+I +++ G + I+ L + D + L++ IP
Sbjct: 368 ------------NLVPMIIHLLDKG-DFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIP 414
Query: 478 SFLAGVFTRKDHHVLILALEIAEMILQKLSD 508
F + T KD V+ + L+ IL+ D
Sbjct: 415 PF-CNLLTVKDAQVVQVVLDGLSNILKMAED 444
>sp|O35344|IMA3_MOUSE Importin subunit alpha-3 OS=Mus musculus GN=Kpna3 PE=1 SV=1
Length = 521
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 7/210 (3%)
Query: 106 LRSILACLSEDTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDI 165
L +IL + D +P ++++ ++LS + ++ + P+LVK + NP +
Sbjct: 73 LEAILQNATSD-NPVVQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSL 131
Query: 166 MLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRDQPH 225
A A+T + + +V+ +AVP L RL + +V EQ + AL I D P
Sbjct: 132 QFEAAWALTNIASGTSAQTQAVVQSNAVP-LFLRLLHSPHQNVCEQAVWALGNIIGDGPQ 190
Query: 226 A---CLEGGAIMAALTYID-FFSTSIQRVALSTVANICK-KLPSECPSHLMEAVPILSNL 280
+ G + L++I+ + R + N+C+ K P + E +P L L
Sbjct: 191 CRDYVISLGVVKPLLSFINPSIPITFLRNVTWVIVNLCRNKDPPPPMETVQEILPALCVL 250
Query: 281 LQYEDRQLVESVAICLIKIAEQLSQSSQML 310
+ + D ++ L + + ++ QM+
Sbjct: 251 IYHTDINILVDTVWALSYLTDGGNEQIQMV 280
>sp|C6K7I2|IMA8_PIG Importin subunit alpha-8 OS=Sus scrofa GN=KPNA7 PE=2 SV=2
Length = 507
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Query: 117 TDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLLAVRAITYL 176
+DP + + ++LS L M+ L P LV+L R +P + A A+T +
Sbjct: 78 SDPEQCFQATQAARKMLSQERNPPLKLMVEAGLIPRLVQLLRSSLHPCLQFEAAWALTNI 137
Query: 177 CDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRDQPH---ACLEGGAI 233
+ +V A+ L + L A ++ V EQ + AL I+ D + AI
Sbjct: 138 ASGASELTRAVVEGGAIQPLVELL-ASSHMSVCEQAVWALGNIAGDGAEFRDIVISSNAI 196
Query: 234 --MAALTYIDFFSTSIQRVALSTVANICK-KLPSECPSHLMEAVPILSNLLQYEDRQLV 289
+ AL + T ++ + + T++N+C+ K P C + + + +P+LS+LLQ+ D +++
Sbjct: 197 PHLLALASSNVPVTFLRNI-VWTLSNLCRNKNPCPCDNAVKQMLPVLSHLLQHRDSEVL 254
>sp|P52171|IMA2_XENLA Importin subunit alpha-2 OS=Xenopus laevis GN=kpna2 PE=1 SV=2
Length = 523
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 131 EVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLLAVRAITYLCDIFPRSSGLLVRH 190
++LS L+ ++ L P LV+ + N + A A+T + + +V
Sbjct: 99 KMLSKERNPPLNDIIEAGLIPKLVEFLSYHNNSTLQFEAAWALTNIASGTSDQTKSVVDG 158
Query: 191 DAVPALCQRLKAIEYLDVAEQCLQALEKISRDQP---HACLEGGAIMAALTYIDFFST-S 246
A+PA + + +L ++EQ + AL I+ D P A + I LT ++ +
Sbjct: 159 GAIPAFISLISS-PHLHISEQAVWALGNIAGDGPLYRDALISCNVIPPLLTLVNPQTPLG 217
Query: 247 IQRVALSTVANICK-KLPSECPSHLMEAVPILSNLLQYEDRQLVESVAICLIKIAEQLSQ 305
R T++N+C+ K P S +++ +P+L+ L+ +ED+ ++ + + +
Sbjct: 218 YLRNITWTLSNLCRNKNPYPPMSAVLQILPVLTQLMLHEDKDILSDTCWAMSYLTD---G 274
Query: 306 SSQMLDEVCSHGLINQTTHLL 326
S+ +D V GL+ + L+
Sbjct: 275 SNDRIDVVVKTGLVERLIQLM 295
>sp|Q9SLX0|IMA1B_ORYSJ Importin subunit alpha-1b OS=Oryza sativa subsp. japonica
GN=Os05g0155500 PE=1 SV=2
Length = 534
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 85/197 (43%), Gaps = 7/197 (3%)
Query: 99 SSSDHGKLRSILACLS--EDTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKL 156
SS+ KL + A + + D + + + T+ ++LS + ++ + P +
Sbjct: 70 SSALQQKLEGLPAMVQAVQSDDSAVQLEATTQFRKLLSIERSPPIEEVINTGVVPRFIAF 129
Query: 157 ARHETNPDIMLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQAL 216
+ E P + A A+T + ++ ++V AVP + L + DV EQ + AL
Sbjct: 130 LQREDYPQLQFEAAWALTNIASGTSDNTKVVVESGAVPIFVKLLSSPSE-DVREQAVWAL 188
Query: 217 EKISRDQPHA---CLEGGAIMAALTYIDFFST-SIQRVALSTVANICKKLPSECPSHLME 272
++ D P L G + L ++ + S+ R A T++N C+ P +
Sbjct: 189 GNVAGDSPKCRDLVLASGGLYPLLQQLNEHAKLSMLRNATWTLSNFCRGKPQPNFEQVKP 248
Query: 273 AVPILSNLLQYEDRQLV 289
A+ L L+ +D +++
Sbjct: 249 ALSALQRLIHSQDEEVL 265
>sp|O00505|IMA3_HUMAN Importin subunit alpha-3 OS=Homo sapiens GN=KPNA3 PE=1 SV=2
Length = 521
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 92/210 (43%), Gaps = 7/210 (3%)
Query: 106 LRSILACLSEDTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDI 165
L +IL + D +P ++++ ++LS + ++ + P+LVK + NP +
Sbjct: 73 LEAILQNATSD-NPVVQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSL 131
Query: 166 MLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRDQPH 225
A A+T + + +V+ +AVP + L++ + +V EQ + AL I D P
Sbjct: 132 QFEAAWALTNIASGTSAQTQAVVQSNAVPLFLRLLRS-PHQNVCEQAVWALGNIIGDGPQ 190
Query: 226 A---CLEGGAIMAALTYID-FFSTSIQRVALSTVANICK-KLPSECPSHLMEAVPILSNL 280
+ G + L++I + R + N+C+ K P + E +P L L
Sbjct: 191 CRDYVISLGVVKPLLSFISPSIPITFLRNVTWVIVNLCRNKDPPPPMETVQEILPALCVL 250
Query: 281 LQYEDRQLVESVAICLIKIAEQLSQSSQML 310
+ + D ++ L + + ++ QM+
Sbjct: 251 IYHTDINILVDTVWALSYLTDGGNEQIQMV 280
>sp|P52293|IMA2_MOUSE Importin subunit alpha-2 OS=Mus musculus GN=Kpna2 PE=1 SV=2
Length = 529
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 103 HGKLRSILACLSEDTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLAR--HE 160
HG + +LA L+ + L L LS + + D++ +L L R H
Sbjct: 203 HGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHH 262
Query: 161 TNPDIMLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKI- 219
+P+++ + AI+YL D ++V+ VP L + L A E L + L+A+ I
Sbjct: 263 NDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATE-LPIVTPALRAIGNIV 321
Query: 220 --SRDQPHACLEGGAIMAALTYIDFFSTSIQRVALSTVANIC 259
+ +Q ++ GA+ + + T+IQ+ A T++NI
Sbjct: 322 TGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 363
>sp|Q02821|IMA1_YEAST Importin subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SRP1 PE=1 SV=1
Length = 542
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 118 DPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLL-AVRAITYL 176
D +++ + ++LS + ++ + P LV+ R E P+++ L A A+T +
Sbjct: 100 DMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMR-ENQPEMLQLEAAWALTNI 158
Query: 177 CDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKI---SRDQPHACLEGGAI 233
+ ++V DAVP Q L ++V EQ + AL + S D L+ A+
Sbjct: 159 ASGTSAQTKVVVDADAVPLFIQLLYT-GSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAM 217
Query: 234 MAALTYIDFFSTSIQRVALSTVANICK-KLPSECPSHLMEAVPILSNLL 281
L + S+ R A T++N+C+ K P S + +A+P L+ L+
Sbjct: 218 EPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLI 266
>sp|P52170|IMA1_XENLA Importin subunit alpha-1 OS=Xenopus laevis GN=kpna1 PE=1 SV=2
Length = 522
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 98/215 (45%), Gaps = 11/215 (5%)
Query: 118 DPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVK-LARHETNPDIMLLAVRAITYL 176
DP + ++LS L+ ++ L P LV+ L+RH+ N + A A+T +
Sbjct: 86 DPENELRCTQAARKMLSRERNPPLNDIIEAGLIPKLVEFLSRHD-NSTLQFEAAWALTNI 144
Query: 177 CDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRDQP---HACLEGGAI 233
+ +V A+PA + + +L ++EQ + AL I+ D P A + I
Sbjct: 145 ASGTSDQTKSVVDGGAIPAFISLISS-PHLHISEQAVWALGNIAGDGPLYRDALINCNVI 203
Query: 234 MAALTYIDFFST-SIQRVALSTVANICK-KLPSECPSHLMEAVPILSNLLQYEDRQLVES 291
L ++ + R ++N+C+ K P S +++ +P+L+ L+ ++D+ ++
Sbjct: 204 PPLLALVNPQTPLGYLRNITWMLSNLCRNKNPYPPMSAVLQILPVLTQLMHHDDKDILSD 263
Query: 292 VAICLIKIAEQLSQSSQMLDEVCSHGLINQTTHLL 326
+ + + S+ +D V G++++ L+
Sbjct: 264 TCWAMSYLTD---GSNDRIDVVVKTGIVDRLIQLM 295
>sp|Q557F4|IMA1A_DICDI Probable importin subunit alpha-A OS=Dictyostelium discoideum
GN=DDB_G0273149 PE=3 SV=1
Length = 550
Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 93 ELQRRRSSSDHGKLRSILACLS--EDTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLS 150
+ Q+ + + K++++ ++ D + +SL + ++LS + ++ +
Sbjct: 69 QFQKYENETMENKIKNLPGLVTALNSNDQAYVYSSLVQFRKLLSIHAYPPIDQVIECGII 128
Query: 151 PVLVKLARHETNPDIMLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAE 210
P L +L + NP + + A+T + R + ++ +VP Q L A +V E
Sbjct: 129 PKLNQLLQC-NNPKVQFESAWALTNIASGNNRQTQTVMESGSVPIFIQLLCAETTDEVKE 187
Query: 211 QCLQALEKISR---DQPHACLEGGAIMAALTYIDF------FSTS---------IQRVAL 252
QC AL I+ D + L+ GA+ A + + + +TS IQ V
Sbjct: 188 QCAWALGNIAGDTVDSRNYLLKYGAMNALIPLLHYGEDNGATTTSANSERKIGLIQNVVW 247
Query: 253 STVANICKKLPSECPSHLMEAVPILSNLLQYED 285
T++N+C+ P S + + +P ++ L++ E+
Sbjct: 248 -TISNLCRGKPQPDFSVVSQCLPAINELIRIEN 279
>sp|Q8NA03|FSIP1_HUMAN Fibrous sheath-interacting protein 1 OS=Homo sapiens GN=FSIP1 PE=2
SV=1
Length = 581
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 20/187 (10%)
Query: 850 HESTSAGLTPVKHDSISSTSGVPKMQDCKIKLTFDLDG-QKLERTLTLYQAILQKQIKTD 908
E + L V+H IS S PK+++ +L + +KL++ L Q +K+IK
Sbjct: 84 EEGSDEDLDLVQHQIISECSDEPKLKELDSQLQDAIQKMKKLDKILAKKQR-REKEIKKQ 142
Query: 909 GEVIAGAKLWTQVYTIIYRRAMESK--CNDPKNCVHLHPISDGDEARLHCAS-FFSSLFA 965
G + KLW ++ + Y A +SK + K + L +S+ H FSS+F
Sbjct: 143 G-LEMRIKLWEEIKSAKYSEAWQSKEEMENTKKFLSLTAVSEETVGPSHEEEDTFSSVFH 201
Query: 966 CQLAFELDKSSPIYDILFLLKSLEGVNR-LTCHLISHERIRAYAEGRFDNLDDLKVEVHS 1024
Q+ E Y++ ++ +N+ TC + +E + + F N + K+E+
Sbjct: 202 TQIPPEE------YEM-----QMQKLNKDFTCDVERNESLIKSGKKPFSNTE--KIELRG 248
Query: 1025 LRQNDFV 1031
DF+
Sbjct: 249 KHNQDFI 255
>sp|A3KGS3|RGPA2_MOUSE Ral GTPase-activating protein subunit alpha-2 OS=Mus musculus
GN=Ralgapa2 PE=1 SV=2
Length = 1872
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 523 IDALLTPEKCSQLFPAFSGIQLCPSSSQKCAGREVLRCLCYAFDTGLSSSASEKQSCKLD 582
+DA + PE+ + L PA SG ++ + Q C ++L L Y + +AS + K +
Sbjct: 182 VDAKIYPEEITPLLPAISGEKI--AEDQTCFFLQIL--LKYM----VIQAASLEWKNKEN 233
Query: 583 KDSVHNLAKSIITKYFSPELFGSDKGLTDILQ 614
+D+ ++ KY+ P LF S LT+I +
Sbjct: 234 QDTGFKFLFTLFRKYYLPHLFPSFTKLTNIYK 265
>sp|Q5M8S7|NIPA_XENTR NIPA-like protein OS=Xenopus tropicalis GN=zc3hc1 PE=2 SV=1
Length = 478
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Query: 940 CVHLHPISDGDEARLHCASFFSSLFACQLAFELDKSSPIYDILFLLKSLEGVNRLTCHLI 999
C L P+ D + + C +L F SP D + L E + L+ +
Sbjct: 116 CASLQPVLDFSKYKQRCVELQEALRKAHEKFCFWPDSPCPDYFWALMVTEPSSVLSDFV- 174
Query: 1000 SHERIRAYAEGRFDNLDDLKVEVHSLRQNDFVNSKLTEK 1038
GRFDNL L++++ S++ D N +TE+
Sbjct: 175 ----------GRFDNLCHLEIQLPSIKHEDLKNMDITEE 203
>sp|P08293|NIFE_AZOVI Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
OS=Azotobacter vinelandii GN=nifE PE=3 SV=1
Length = 474
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%)
Query: 588 NLAKSIITKYFSPELFGSDKGLTDILQDLRSFSAALTDLMNVCTDNEAHARDEEKFYCIL 647
N+A+ + Y +P GS G+TD Q LR F+ L D AR+E K L
Sbjct: 256 NVARKLQETYGTPWFEGSFYGITDTSQALRDFARLLDDPDLTARTEALIAREEAKVRAAL 315
Query: 648 HQIMEKLNGR 657
+L G+
Sbjct: 316 EPWRARLEGK 325
>sp|Q76P24|HD_DICDI HD protein homolog OS=Dictyostelium discoideum GN=htt PE=3 SV=1
Length = 3095
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 243 FSTSIQRVALSTVANICKKL-PSECPSHLMEAVPILSNLLQY-EDRQLVESVAICLIKIA 300
F QR+AL IC + PS+C +++ VP +++LL ED L ES++I + I+
Sbjct: 212 FPLKSQRIALIKFGEICSFIRPSKCRKYILSLVPPINSLLSIIEDESLQESISISMENIS 271
Query: 301 EQL 303
+ L
Sbjct: 272 KIL 274
>sp|P86411|RGPA2_RAT Ral GTPase-activating protein subunit alpha-2 OS=Rattus norvegicus
GN=Ralgapa2 PE=1 SV=1
Length = 1872
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 523 IDALLTPEKCSQLFPAFSGIQLCPSSSQKCAGREVLRCLCYAFDTGLSSSASEKQSCKLD 582
+DA + PE+ + L PA SG ++ + Q C ++L L Y + +AS + K +
Sbjct: 182 VDAKIYPEEITPLLPAVSGEKI--AEDQTCFFLQIL--LKYM----VIQAASLEWKNKEN 233
Query: 583 KDSVHNLAKSIITKYFSPELFGSDKGLTDILQ 614
+D+ ++ KY+ P LF S LT+I +
Sbjct: 234 QDTGFKFLFTLFRKYYLPHLFPSFTKLTNIYK 265
>sp|Q6MBF0|TIG_PARUW Trigger factor OS=Protochlamydia amoebophila (strain UWE25) GN=tig
PE=3 SV=1
Length = 435
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 93/241 (38%), Gaps = 50/241 (20%)
Query: 848 MEHESTSAGLTPVKHDSISSTSGVPKMQDCKIKLTFDLDGQKLERTLTLYQAILQ---KQ 904
M ++ T AG + +D+++ + + C++K FD+ K E + YQ L+ K+
Sbjct: 1 MSNQETEAGSKTISNDNLNVQ--ITRGTHCQVK--FDITV-KPEAVVAAYQKALKTINKE 55
Query: 905 IKTDGEVIAGAKLWTQVYTIIYRRAMESKC---------NDPKNCVHLHPISDGDEARL- 954
I G K Q+ Y ++ +C ND H+HP+ DG R
Sbjct: 56 INIPG--FRKGKAPQQLILEKYGSNVQKECVDIVLQTGFNDALQLTHIHPLKDGHIKRPI 113
Query: 955 --HCASFFSSLFACQLAFELDKSSPIYDILFLLKSLEGVNRLTCHLISHERIRAYAEGRF 1012
+C + F L FE + P V HL ++ E R
Sbjct: 114 VHYCTQEKGAHFV--LEFEARPTIP------------SVQPQELHLHHQAPVQVTDEERK 159
Query: 1013 DNLDDL--------KVEVHSLRQNDFVNSKLTEKLEQQMR-----DSAAVSTGGVPSWCN 1059
+ LD + +E +++ DF+N +T LE+ R V+ G+PSW
Sbjct: 160 NALDQVLLQFTTYQPIEDRPVQEGDFINVDVT-ILEETPRLIIDNQRTQVNQSGLPSWIQ 218
Query: 1060 Q 1060
+
Sbjct: 219 E 219
>sp|P52295|IMA_DROME Importin subunit alpha OS=Drosophila melanogaster GN=Pen PE=1 SV=2
Length = 522
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 109 ILACLSEDTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLL 168
I+A ++ + D R + ++LS + M+ + P+ ++ ++ N +
Sbjct: 74 IVAAMNSE-DQERQFLGMQSARKMLSRERNPPIDLMIGHGIVPICIRFLQNTNNSMLQFE 132
Query: 169 AVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRD 222
A A+T + + ++ H+AVP L++ + +++AEQ + AL I+ D
Sbjct: 133 AAWALTNIASGTSDQTRCVIEHNAVPHFVALLQS-KSMNLAEQAVWALGNIAGD 185
>sp|Q9NP80|PLPL8_HUMAN Calcium-independent phospholipase A2-gamma OS=Homo sapiens
GN=PNPLA8 PE=1 SV=1
Length = 782
Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 133 LSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLLAVRAITYLCDIFPRSSGLLVRHDA 192
LS E ++ + D+ + LV+ R T+P + + V +T+ FP G+ V+
Sbjct: 346 LSLQREKIIARVSIDNRTRALVQALRRTTDPKLCITRVEELTFHLLEFPEGKGVAVKERI 405
Query: 193 VPALCQRLKAIEYLDVAEQCLQA 215
+P L RL+ I+ ++ LQA
Sbjct: 406 IPYLL-RLRQIK-----DETLQA 422
>sp|Q22498|COPG_CAEEL Probable coatomer subunit gamma OS=Caenorhabditis elegans
GN=T14G10.5 PE=2 SV=1
Length = 870
Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 18/189 (9%)
Query: 50 HHNDMDTSSSASA------SSRSEEEPEKDAGYGSCDSDDAEPRHRGLRELQRRRSSSDH 103
H ++M +A A ++ SE +P A C S A R +R L + + +
Sbjct: 256 HKSEMVVYEAARAIVSLPQTTPSEIQPAITALQMCCTSPKAAVRFAAVRTLNKVAMAHPN 315
Query: 104 GKLRSILACLSEDTDPSRHITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNP 163
+ + TDP+R I +L + +L E S+ +M V +E +
Sbjct: 316 AVMSCNVDLEKFITDPNRSIATLA-ITTLLKTGAESSVERLMQQIAGFV------NEISD 368
Query: 164 DIMLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRDQ 223
+ ++ V AI LC +PR ++ +P L + L++ D + ++ + I +
Sbjct: 369 EFKIVVVDAIRSLCSRYPRKHTVM-----MPFLAKMLRSDGSYDYKKAIVETIIAIIEEN 423
Query: 224 PHACLEGGA 232
P A + G A
Sbjct: 424 PDAKVAGLA 432
>sp|C0LLJ0|IMA8_MOUSE Importin subunit alpha-8 OS=Mus musculus GN=Kpna7 PE=1 SV=1
Length = 499
Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 151 PVLVKLARHETNPDIMLLAVRAITYLCDIFPRSSGLLVRHDAVPALCQRLKAIEYLDVAE 210
P L +L H N +I+ A++YL +V +P L + + + E L ++
Sbjct: 242 PPLCQLLLHRDN-EILADTCWALSYLTKGGKEYIHHVVTTGILPRLVELMTSSE-LSISI 299
Query: 211 QCLQALEKI---SRDQPHACLEGGAIMAALTYIDFFSTSIQRVALSTVANICKKLPSECP 267
CL + I + +Q ++ G + + TSIQ +A T++N+ +
Sbjct: 300 PCLHTIGNIVAGTDEQTQMAIDAGMLKVLGQVLKHPKTSIQVLAAWTMSNVAAGPRHQVE 359
Query: 268 SHLMEAVPILSNLLQYEDRQLVESVAICLIKIAEQLSQ 305
L +PIL +LL+ + ++ + V +I IA SQ
Sbjct: 360 QLLCNLLPILVDLLRNAELKVQKEVVCTVINIATGASQ 397
>sp|Q6RHW4|HYAL1_PIG Hyaluronidase-1 OS=Sus scrofa GN=HYAL1 PE=2 SV=1
Length = 435
Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 967 QLAFELDKSSPIYDILFLLKSLEGVNRLTCHLISHERIRAYAEGRFDNLDDLKVEVHSLR 1026
QL + +S +Y ++L +LEG N+ + + H A+ +L V ++
Sbjct: 231 QLGWLWGQSRALYPSIYLPSALEGTNKTQLY-VQHRVNEAFRVAAAAGDPNLPVLPYAQI 289
Query: 1027 QNDFVNSKLT-EKLEQQMRDSAAVSTGGVPSW 1057
+D N L+ E+LE + +SAA GV W
Sbjct: 290 FHDMTNRLLSREELEHSLGESAAQGAAGVVLW 321
>sp|Q8N8A4|GAH6_HUMAN HERV-H_22q11.2 provirus ancestral Gag polyprotein OS=Homo sapiens
PE=2 SV=3
Length = 274
Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 60/136 (44%), Gaps = 14/136 (10%)
Query: 16 PDDKRACSSLDFRPSTSNSSVQTHLNSTNSTPETHHNDMDTSSSASASSRSEEEPEKDAG 75
P + AC + P+TS++S N + ++P + + SS+ SAS +++ P ++
Sbjct: 140 PPPQAACRQTELSPNTSSASTPPPYNPSITSPPHTWSGLQFSSATSASPPAQQFPLREVA 199
Query: 76 YGSCDSDDAEPRHRGLRELQRRRSSSDHGKLRSILACLSEDTDPSRHITSLTELCEVLSF 135
G+ ++ S SD ++ L S +DP+++I L +
Sbjct: 200 GA-----------EGIVKVHVLFSLSDLSQISQCLGSFS--SDPTKYIQEFQYLTLSYNL 246
Query: 136 AMEDSLSSMMADSLSP 151
D L+ ++ +LSP
Sbjct: 247 TWSD-LNVILTSTLSP 261
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 373,547,713
Number of Sequences: 539616
Number of extensions: 15165336
Number of successful extensions: 46237
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 45880
Number of HSP's gapped (non-prelim): 347
length of query: 1079
length of database: 191,569,459
effective HSP length: 128
effective length of query: 951
effective length of database: 122,498,611
effective search space: 116496179061
effective search space used: 116496179061
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)