Query 001430
Match_columns 1079
No_of_seqs 380 out of 2014
Neff 5.1
Searched_HMMs 29240
Date Tue Mar 26 22:47:02 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/001430.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_27-30//hhsearch_pdb/001430hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 1.0 1 1 458.8 48.7 495 271-1036 65-578 (802)
2 1weo_A Cellulose synthase, cat 1.0 1 1 321.5 9.2 90 3-93 2-91 (93)
3 2z86_A Chondroitin synthase; G 1.0 1 1 130.1 17.8 129 345-598 89-218 (625)
4 2ffu_A Ppgalnact-2, polypeptid 1.0 1 1 121.8 10.7 113 345-579 62-174 (501)
5 2d7i_A Polypeptide N-acetylgal 1.0 1 1 120.6 16.4 259 345-837 108-379 (570)
6 1xhb_A Polypeptide N-acetylgal 1.0 1 1 117.2 18.6 117 344-579 24-143 (472)
7 2z86_A Chondroitin synthase; G 1.0 1 1 112.6 12.7 126 345-597 371-497 (625)
8 1qg8_A Protein (spore coat pol 1.0 1 1 111.3 7.5 120 349-595 1-129 (255)
9 3l7i_A Teichoic acid biosynthe 1.0 1 1 105.5 0.0 111 348-579 1-111 (729)
10 3bcv_A Putative glycosyltransf 1.0 1 1 102.4 13.6 111 346-579 2-112 (240)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=1.00 E-value=1 Score=458.82 Aligned_cols=495 Identities=22% Similarity=0.352 Sum_probs=378.2
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC
Q ss_conf 47-999999999999998873046403-----589999999999999999998420554423551046687542104899
Q 001430 271 YR-MVIFLRLIILGIFLYYRIKNPVHN-----AIALWLISVICEIWFAISWIFDQFPKWLPVNRETYLDRLSLRYEREGE 344 (1079)
Q Consensus 271 ~R-~~i~~~l~~l~~~l~wRi~~~~~~-----a~~lwl~~~~~Ei~f~~~wil~q~~kw~Pv~R~~~~drL~~r~~~~~~ 344 (1079)
.| +++++.+++.++|++||++.+++. ..++|+.++++|+++.+.|++..+..|.|..|.+.++ ..
T Consensus 65 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~---------~~ 135 (802)
T 4hg6_A 65 PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRP---------LQ 135 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCC---------CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------CC
T ss_conf 578999999999999999986600677530589999999999999999999999999836567888898---------98
Q ss_pred CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99997306999368999999799999999988397999984899906998314278865448874321224442178889
Q 001430 345 PSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPR 424 (1079)
Q Consensus 345 ~~~lp~VDvfV~T~dp~kEpp~v~~nTvls~la~DYP~~kl~~yvsDDG~~~ltf~al~Eaa~FA~~WvPFCkk~~iepR 424 (1079)
++++|.|+|+||||| |++.++.+|+.|++++|||.+++.++|.|||.++-|.+.
T Consensus 136 ~~~~P~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~----------------------- 189 (802)
T 4hg6_A 136 PEELPTVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS----------------------- 189 (802)
T ss_dssp TTTCCCEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC-----------------------
T ss_pred CCCCCCEEEEEEECC---CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC-----------------------
T ss_conf 567984899999799---989999999999984669998289999989987642234-----------------------
Q ss_pred CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 91012100123234878803599999999999999999988777520587333334689989999888994211010046
Q 001430 425 APEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGE 504 (1079)
Q Consensus 425 aPe~YF~~k~d~~~~~~~~~f~~err~mkreYee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~g~~~rdHp~~iqv~l~~ 504 (1079)
..|+.+++... .++++ +.+.++
T Consensus 190 ----------------~d~~i~~~~~~---~~~~l----~~~~~~----------------------------------- 211 (802)
T 4hg6_A 190 ----------------PDPELAQKAQE---RRREL----QQLCRE----------------------------------- 211 (802)
T ss_dssp ----------------SSHHHHHHHHH---HHHHH----HHHHHH-----------------------------------
T ss_pred ----------------CCHHHHHHHHH---HHHHH----HHHHHH-----------------------------------
T ss_conf ----------------88789999886---66999----999985-----------------------------------
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH-CCCCCCC
Q ss_conf 999787889878289996136999886750336799998701357987899933899879469999999844-2899994
Q 001430 505 NGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFM-MDPNLGK 583 (1079)
Q Consensus 505 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvSavltngp~il~lDaDh~i~~~~~Lr~amcff-~Dp~~g~ 583 (1079)
.++.|+.|++ +++.||||+|.+++. ++++||+.+|||++ ..|++|++.+.+| .||
T Consensus 212 -----------~~v~~i~~~~----~~~GKa~alN~gl~~----a~gd~Il~lDaD~~-~~pd~L~~lv~~~~~dp---- 267 (802)
T 4hg6_A 212 -----------LGVVYSTRER----NEHAKAGNMSAALER----LKGELVVVFDADHV-PSRDFLARTVGYFVEDP---- 267 (802)
T ss_dssp -----------HTCEEEECSS----CCSHHHHHHHHHHHH----CCCSEEEECCTTEE-ECTTHHHHHHHHHHHSS----
T ss_pred -----------CCCEEEEECC----CCCCCHHHHHHHHHH----CCCCEEEEECCCCC-CCHHHHHHHHHHHHCCC----
T ss_conf -----------6947999268----877636899999996----59999999999988-18589999999984099----
Q ss_pred EEEEEECCCCCCCCCCC-------CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 08999037201489964-------21110012446433022236788521135710223310178999998999998754
Q 001430 584 HVCYVQFPQRFDGIDRN-------DRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLS 656 (1079)
Q Consensus 584 ~v~~VQ~PQ~F~nid~~-------Dry~n~~~vFfdi~~~glDg~qgp~yvGTgcvfRR~ALyg~~p~~~~~~~~~~~~~ 656 (1079)
+++.||+++.+.|.++. .++.+++..|+...+.+.+.+++++++|+++++||+++.
T Consensus 268 ~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~----------------- 330 (802)
T 4hg6_A 268 DLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALD----------------- 330 (802)
T ss_dssp SCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHH-----------------
T ss_pred CEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHH-----------------
T ss_conf 859996567976785576544477651678999988887547643884542664032499999-----------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
Q ss_conf 43478865577767668875467888899976543012110026888760467766577887750641889987865409
Q 001430 657 SLFGGSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENG 736 (1079)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~f~~Sal~e~G 736 (1079)
++|
T Consensus 331 -----------------------------------------------------------------------------~vG 333 (802)
T 4hg6_A 331 -----------------------------------------------------------------------------EAG 333 (802)
T ss_dssp -----------------------------------------------------------------------------HHT
T ss_pred -----------------------------------------------------------------------------HCC
T ss_conf -----------------------------------------------------------------------------708
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHH
Q ss_conf 99998653668999887303465555764543472135444329999999878978999478998423567989999998
Q 001430 737 GVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLN 816 (1079)
Q Consensus 737 G~p~~~~~~~~~~eai~v~sC~YE~~T~WG~evGW~ygSITED~~TslrLh~~GWrsvY~~p~~~af~GlaPetl~~~lk 816 (1079)
|++. .+++||.+++++++.+||++.|+++ . .+++.+|+++.++++
T Consensus 334 gf~~---------------------------------~~~~ED~~l~~rl~~~G~ri~~~~~-~-~~~~~~p~t~~~~~~ 378 (802)
T 4hg6_A 334 GFAG---------------------------------ETITEDAETALEIHSRGWKSLYIDR-A-MIAGLQPETFASFIQ 378 (802)
T ss_dssp TCCC---------------------------------SSSSHHHHHHHHHHTTTCCEEECCC-C-CEEECCCCSHHHHHH
T ss_pred CCCC---------------------------------CCCCHHHHHHHHHHHCCCEEEEECC-C-EEEECCCCCHHHHHH
T ss_conf 8678---------------------------------8803099999999976995999368-8-799668889999999
Q ss_pred HHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 77876211056766204622113588888333136556655665589999999999999971896445430579999999
Q 001430 817 QVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFIS 896 (1079)
Q Consensus 817 QR~RWA~G~iQIllsk~~Pl~~g~~~~Ltl~QRL~Yl~~~ly~l~sl~~liy~llP~l~LltGi~iip~~s~~~~i~fi~ 896 (1079)
||.||++|.+|+++. ++|++ .+++++.||+.|+...++++.+++.++++++|++++++++.++......++.+++.
T Consensus 379 Qr~RW~~G~~q~l~~-~~pl~---~~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp 454 (802)
T 4hg6_A 379 QRGRWATGMMQMLLL-KNPLF---RRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPG 454 (802)
T ss_dssp HHHHHHHHHHHHHHH-SCTTS---CSSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHH-HCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 999997008999988-59234---68998999999999999999999999999999999999678763389999999999
Q ss_pred -HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEECCCCCCCCCCCCCEEECCC
Q ss_conf -999999999987430364232112343111001247999999999999-973987770536798888877531121124
Q 001430 897 -LFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLK-VLAGIDTNFTVTSKASDEDGDFTELYMFKW 974 (1079)
Q Consensus 897 -l~ls~~~~~lLe~rwsG~si~~wWrneqfW~I~~vsa~LfAvl~aLlk-~L~g~~~~F~VTpK~~~~d~~~~ely~f~w 974 (1079)
+.+...+...+. .... ..|| ++.++.+ .. ...+.+++. .+.+++.+|+||+|+...+..+ +
T Consensus 455 ~~l~~~~~~~~~~---~~~r-~~~~-~~l~~~~----~~-~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~~~-----~-- 517 (802)
T 4hg6_A 455 YLAVSFLVQNALF---ARQR-WPLV-SEVYEVA----QA-PYLARAIVTTLLRPRSARFAVTAKDETLSENY-----I-- 517 (802)
T ss_dssp HHHHHHHHHHHHH---TTTS-CTTH-HHHHHHH----HH-HHHHHHHHHHHHSTTCCCCCCCCCCCCCSSCC-----B--
T ss_pred HHHHHHHHHHHHH---CCCH-HHHH-HHHHHHH----HH-HHHHHHHHHHHHCCCCCCCEECCCCCCCCCCC-----H--
T ss_conf 9999999999995---6747-9999-9999999----99-99999999999188898202779976566531-----2--
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---CCCC
Q ss_conf 2004799999999999999999998831888875157999999999998999998871---3789
Q 001430 975 TTLLIPPTTLLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLM---GRQN 1036 (1079)
Q Consensus 975 s~L~iP~~~LlilnLvaiv~Gi~r~i~~~~~~~~~l~g~lv~~~Wvi~nL~Pfl~gL~---gR~~ 1036 (1079)
+.+++|+.++++++++++++|+++....+ .+..+.+++++|+++|++.+..++. +|+.
T Consensus 518 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~ 578 (802)
T 4hg6_A 518 SPIYRPLLFTFLLCLSGVLATLVRWVAFP----GDRSVLLVVGGWAVLNVLLVGFALRAVAEKQQ 578 (802)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHHCG----GGHHHHHHHHHHHHHHHHHHHHHHTTTBCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 26899999999999999999999996067----76342001159999999999999999745887
No 2
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=1.00 E-value=1 Score=321.50 Aligned_cols=90 Identities=60% Similarity=1.279 Sum_probs=86.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 88887876446658865443478754578999300389999974512379898507988888710011346887545998
Q 001430 3 SEGETGVKSIKNVGGQVCQICGDNVGKTVDGNPFVACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKKHKGSPAILGDR 82 (1079)
Q Consensus 3 ~~~~~~~~~~~~~~~~~CqiCgd~vg~~~~G~~fvaC~eC~fpvCr~CyeyerkeG~~~CpqCkt~Ykr~kgsprv~gd~ 82 (1079)
|.|++++|||+++++|+||||||+||+++|||+|||||||+|||||||||||||||||+|||||||||||||||||+||
T Consensus 2 ~~g~~~~kp~~~~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYkr~kgsp~v~GD- 80 (93)
T 1weo_A 2 SSGSSGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGD- 80 (93)
T ss_dssp CCSSSSSSCCSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCCTTCCCCTTS-
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC-
T ss_conf 8777788752005887261145743547789888763006773518899999852674055458762233688876666-
Q ss_pred CCCCCCCCCCC
Q ss_conf 76788788666
Q 001430 83 EEDGDADDGAS 93 (1079)
Q Consensus 83 e~e~~~dd~~~ 93 (1079)
|+|+++||+++
T Consensus 81 e~e~d~dD~~~ 91 (93)
T 1weo_A 81 EDEEDIDSGPS 91 (93)
T ss_dssp CCCCCSCCCCS
T ss_pred CCCCCCCCCCC
T ss_conf 44465332445
No 3
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=1.00 E-value=1 Score=130.10 Aligned_cols=129 Identities=18% Similarity=0.195 Sum_probs=98.7
Q ss_pred CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99997306999368999999799999999988397999984899906998314278865448874321224442178889
Q 001430 345 PSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPR 424 (1079)
Q Consensus 345 ~~~lp~VDvfV~T~dp~kEpp~v~~nTvls~la~DYP~~kl~~yvsDDG~~~ltf~al~Eaa~FA~~WvPFCkk~~iepR 424 (1079)
+...|.|+|+|||+| | +..+..|+.|+++.+||. .+.++|.|||.+.-|.+.+.
T Consensus 89 ~~~~p~vsviIp~~n---~-~~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~--------------------- 142 (625)
T 2z86_A 89 QLIIDGLSIVIPTYN---R-AKILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVR--------------------- 142 (625)
T ss_dssp -CCCCCEEEEEEESS---C-HHHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHH---------------------
T ss_pred CCCCCCEEEEEECCC---C-HHHHHHHHHHHHHHCCCC-CEEEEEEECCCCHHHHHHHH---------------------
T ss_conf 346982799990388---5-788999999998436579-86999996798320799999---------------------
Q ss_pred CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 91012100123234878803599999999999999999988777520587333334689989999888994211010046
Q 001430 425 APEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGE 504 (1079)
Q Consensus 425 aPe~YF~~k~d~~~~~~~~~f~~err~mkreYee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~g~~~rdHp~~iqv~l~~ 504 (1079)
.+.
T Consensus 143 ----------------------------------------~~~------------------------------------- 145 (625)
T 2z86_A 143 ----------------------------------------EFE------------------------------------- 145 (625)
T ss_dssp ----------------------------------------TTT-------------------------------------
T ss_pred ----------------------------------------HHH-------------------------------------
T ss_conf ----------------------------------------856-------------------------------------
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHC-CCCCCC
Q ss_conf 9997878898782899961369998867503367999987013579878999338998794699999998442-899994
Q 001430 505 NGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMM-DPNLGK 583 (1079)
Q Consensus 505 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvSavltngp~il~lDaDh~i~~~~~Lr~amcff~-Dp~~g~ 583 (1079)
.-+++.|+.+++ +.+.||+|+|.+++. +.|+||+.+|+|+. ..|++|.+.+..|. +|
T Consensus 146 ---------~~~~i~~i~~~~----~~~g~~~a~N~g~~~----a~g~~v~~lD~D~~-~~~~~l~~~~~~~~~~~---- 203 (625)
T 2z86_A 146 ---------SLLNIKYVRQKD----YGYQLCAVRNLGLRA----AKYNYVAILDCDMA-PNPLWVQSYMELLAVDD---- 203 (625)
T ss_dssp ---------TTSCEEEEEECC----CSCCHHHHHHHHHHH----CCSSEEEEECTTEE-ECTTHHHHHHHHHHHCT----
T ss_pred ---------HCCCEEEEEECC----CCCCHHHHHHHHHHH----CCCCEEEEECCCCC-CCHHHHHHHHHHHHCCC----
T ss_conf ---------317829998678----774306899999986----88478999789877-79799999999985598----
Q ss_pred EEEEEECCCCCCCCC
Q ss_conf 089990372014899
Q 001430 584 HVCYVQFPQRFDGID 598 (1079)
Q Consensus 584 ~v~~VQ~PQ~F~nid 598 (1079)
.++.|+..+.+++..
T Consensus 204 ~~~~~g~~~~~~~~~ 218 (625)
T 2z86_A 204 NVALIGPRKYIDTSK 218 (625)
T ss_dssp TEEEECCEEEECCTT
T ss_pred CEEEEEEEEECCCCC
T ss_conf 639998556516742
No 4
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=1.00 E-value=1 Score=121.81 Aligned_cols=113 Identities=17% Similarity=0.119 Sum_probs=89.5
Q ss_pred CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99997306999368999999799999999988397999984899906998314278865448874321224442178889
Q 001430 345 PSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPR 424 (1079)
Q Consensus 345 ~~~lp~VDvfV~T~dp~kEpp~v~~nTvls~la~DYP~~kl~~yvsDDG~~~ltf~al~Eaa~FA~~WvPFCkk~~iepR 424 (1079)
+..+|.|.|.||||| |+...+..||.|+++..||.....+.|.|||...-|.+.
T Consensus 62 ~~~~p~vSVIIp~yN---~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~----------------------- 115 (501)
T 2ffu_A 62 RVDLPATSVVITFHN---EARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGA----------------------- 115 (501)
T ss_dssp CSSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHH-----------------------
T ss_pred CCCCCCEEEEEEECC---CCHHHHHHHHHHHHHHCCHHHCEEEEEEECCCCCHHHHH-----------------------
T ss_conf 867997799999696---868999999999985086633514999978999567899-----------------------
Q ss_pred CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 91012100123234878803599999999999999999988777520587333334689989999888994211010046
Q 001430 425 APEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGE 504 (1079)
Q Consensus 425 aPe~YF~~k~d~~~~~~~~~f~~err~mkreYee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~g~~~rdHp~~iqv~l~~ 504 (1079)
. +.
T Consensus 116 ----------------------------------~------~~------------------------------------- 118 (501)
T 2ffu_A 116 ----------------------------------L------LG------------------------------------- 118 (501)
T ss_dssp ----------------------------------G------GG-------------------------------------
T ss_pred ----------------------------------H------HH-------------------------------------
T ss_conf ----------------------------------9------84-------------------------------------
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 999787889878289996136999886750336799998701357987899933899879469999999844289
Q 001430 505 NGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDP 579 (1079)
Q Consensus 505 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvSavltngp~il~lDaDh~i~~~~~Lr~amcff~Dp 579 (1079)
..|++.|+..+++.| +++|+|.+++. +.|+||+.+|+|.. ..|++|.+.+..+.+.
T Consensus 119 ---------~~~~v~vi~~~~n~G-----~~~A~N~G~~~----A~gd~i~flD~D~~-~~p~~L~~ll~~~~~~ 174 (501)
T 2ffu_A 119 ---------KIEKVRVLRNDRREG-----LMRSRVRGADA----AQAKVLTFLDSHCE-CNEHWLEPLLERVAED 174 (501)
T ss_dssp ---------GBTTEEEEECSSCCH-----HHHHHHHHHHH----CCSSEEEECCSSEE-ECTTCHHHHHHHHHHC
T ss_pred ---------CCCCEEEEECCCCCC-----HHHHHHHHHHH----CCCCEEEEECCCCC-CCCCHHHHHHHHHHHC
T ss_conf ---------189879998998868-----89999998986----68988999779830-6720799999999839
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=1.00 E-value=1 Score=120.56 Aligned_cols=259 Identities=18% Similarity=0.124 Sum_probs=152.5
Q ss_pred CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHH-HHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 999973069993689999997999999999883979999848999069983142-7886544887432122444217888
Q 001430 345 PSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLT-FEALSETSEFARKWVPFCKKYNIEP 423 (1079)
Q Consensus 345 ~~~lp~VDvfV~T~dp~kEpp~v~~nTvls~la~DYP~~kl~~yvsDDG~~~lt-f~al~Eaa~FA~~WvPFCkk~~iep 423 (1079)
+..+|.|.|.||||| |+...+..||.|+++..||...+.+.|.|||...-| .+.+
T Consensus 108 ~~~~P~vSVIIp~yN---e~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l--------------------- 163 (570)
T 2d7i_A 108 LETLPNTSIIIPFHN---EGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPL--------------------- 163 (570)
T ss_dssp ESSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHH---------------------
T ss_pred CCCCCCEEEEEEECC---CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHH---------------------
T ss_conf 888997599999789---87899999999998358745767999998999837889999---------------------
Q ss_pred CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
Q ss_conf 99101210012323487880359999999999999999998877752058733333468998999988899421101004
Q 001430 424 RAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLG 503 (1079)
Q Consensus 424 RaPe~YF~~k~d~~~~~~~~~f~~err~mkreYee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~g~~~rdHp~~iqv~l~ 503 (1079)
+++ ++
T Consensus 164 ---------------------------------~~~-------~~----------------------------------- 168 (570)
T 2d7i_A 164 ---------------------------------EDY-------MA----------------------------------- 168 (570)
T ss_dssp ---------------------------------HHH-------HT-----------------------------------
T ss_pred ---------------------------------HHH-------HH-----------------------------------
T ss_conf ---------------------------------999-------97-----------------------------------
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 69997878898782899961369998867503367999987013579878999338998794699999998442899994
Q 001430 504 ENGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGK 583 (1079)
Q Consensus 504 ~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvSavltngp~il~lDaDh~i~~~~~Lr~amcff~Dp~~g~ 583 (1079)
..|++.++..+++.| +++|+|.+++. +.|+||+.||+|.. ..|++|.+.+-.+.+..
T Consensus 169 ----------~~~~v~vi~~~~n~G-----~~~A~N~G~~~----A~gd~i~fLD~D~~-~~p~~L~~ll~~l~~~~--- 225 (570)
T 2d7i_A 169 ----------LFPSVRILRTKKREG-----LIRTRMLGASV----ATGDVITFLDSHCE-ANVNWLPPLLDRIARNR--- 225 (570)
T ss_dssp ----------TSTTEEEEECSSCCC-----HHHHHHHHHHH----CCSSEEEECCSSEE-ECTTCSHHHHHHHHHCT---
T ss_pred ----------HCCEEEEEECCCCCC-----HHHHHHHHHHH----CCCCEEEEECCCCC-CCCCHHHHHHHHHHHCC---
T ss_conf ----------478089998998879-----89999999986----67888999759852-24038999999998489---
Q ss_pred EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 08999037201489964211100124464330222367885211357102233101789999989999987544347886
Q 001430 584 HVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGSR 663 (1079)
Q Consensus 584 ~v~~VQ~PQ~F~nid~~Dry~n~~~vFfdi~~~glDg~qgp~yvGTgcvfRR~ALyg~~p~~~~~~~~~~~~~~~~~~~~ 663 (1079)
.++ |.....+.+.+.. .+... +..+..+.+.- ...+++..+.. ....
T Consensus 226 ~~v-v~~~i~~~~~~~~-~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~-----~~~~-------------- 272 (570)
T 2d7i_A 226 KTI-VCPMIDVIDHDDF-RYETQ----------AGDAMRGAFDW--EMYYKRIPIPP-----ELQK-------------- 272 (570)
T ss_dssp TEE-EEEEEEEECTTTC-CEECC----------TTSSCEEEECT--TCCEEEECCCT-----TTCC--------------
T ss_pred CEE-EEEEEECCCCCCH-HHCCC----------CCCCCCCCCCC--CCCCCCCCCCH-----HHHC--------------
T ss_conf 779-8600302278754-22156----------67765541454--33102045654-----4540--------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf 55777676688754678888999765430121100268887604677665778877506418899878654099999865
Q 001430 664 KKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSAT 743 (1079)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~f~~Sal~e~GG~p~~~~ 743 (1079)
.. . . ..+ . ...-.|....++++++.++||+.+.
T Consensus 273 -------------~~----~--~-~~~---~----------------------~~~~~g~~~~irr~~~~~iGgfDe~-- 305 (570)
T 2d7i_A 273 -------------AD----P--S-DPF---E----------------------SPVMAGGLFAVDRKWFWELGGYDPG-- 305 (570)
T ss_dssp -------------SS----T--T-SCE---E----------------------CSSCCSSSEEEEHHHHHHTTSSCTT--
T ss_pred -------------CC----C--C-CCE---E----------------------CCCCCCEEEEEEHHHHHHCCCCCCC--
T ss_conf -------------37----7--7-526---5----------------------4553536899999999865898876--
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC--CCHHHHHHHHHHCCCEEEEECCCCCCCC---CCCCCC-------H
Q ss_conf 366899988730346555576454347213544--4329999999878978999478998423---567989-------9
Q 001430 744 HETLLKEAIHVISCGYEDKTEWGSEIGWIYGSV--TEDILTGFKMHARGWRSIYCMPKRPAFK---GSAPIN-------L 811 (1079)
Q Consensus 744 ~~~~~~eai~v~sC~YE~~T~WG~evGW~ygSI--TED~~TslrLh~~GWrsvY~~p~~~af~---GlaPet-------l 811 (1079)
-.+ .||+++++|+...||+.+|+.... +.+ +..|.+ .
T Consensus 306 ------------------------------~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~-v~H~~r~~~~~~~~~~~~~~ 354 (570)
T 2d7i_A 306 ------------------------------LEIWGGEQYEISFKVWMCGGRMEDIPCSR-VGHIYRKYVPYKVPAGVSLA 354 (570)
T ss_dssp ------------------------------CCSSSSHHHHHHHHHHHTTCEEEEEEEEE-EEECCCSSCCSCCCSSCCHH
T ss_pred ------------------------------CCCCCCCHHHHHHHHHHCCCEEEECCCEE-EEEECCCCCCCCCCCHHHHH
T ss_conf ------------------------------65567113899999985798499736728-99973366898887401667
Q ss_pred HHHHHHHHHHHCCCHHHHHHCCCCCC
Q ss_conf 99998778762110567662046221
Q 001430 812 SDRLNQVLRWALGSVEILFSRHCPIW 837 (1079)
Q Consensus 812 ~~~lkQR~RWA~G~iQIllsk~~Pl~ 837 (1079)
........+|.....+.+..+ +|..
T Consensus 355 ~n~~r~~~~W~d~~~~~~y~~-~p~~ 379 (570)
T 2d7i_A 355 RNLKRVAEVWMDEYAEYIYQR-RPEY 379 (570)
T ss_dssp HHHHHHHHHHCGGGHHHHHTT-CGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCCC
T ss_conf 778999999889999999751-9210
No 6
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=1.00 E-value=1 Score=117.21 Aligned_cols=117 Identities=19% Similarity=0.145 Sum_probs=91.6
Q ss_pred CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHH-HHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 999997306999368999999799999999988397999984899906998314-2788654488743212244421788
Q 001430 344 EPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAML-TFEALSETSEFARKWVPFCKKYNIE 422 (1079)
Q Consensus 344 ~~~~lp~VDvfV~T~dp~kEpp~v~~nTvls~la~DYP~~kl~~yvsDDG~~~l-tf~al~Eaa~FA~~WvPFCkk~~ie 422 (1079)
.+..+|.|.|.||||| |+...+..||.|+++.+||.....++|.|||...- |.+.+
T Consensus 24 ~~~~~p~vSVIIp~yN---~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l-------------------- 80 (472)
T 1xhb_A 24 YPDNLPTTSVVIVFHN---EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPL-------------------- 80 (472)
T ss_dssp CCSCCCCEEEEEEESS---CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHH--------------------
T ss_pred CCCCCCCEEEEEEECC---CCHHHHHHHHHHHHHCCCHHHCEEEEEEECCCCCHHHHHHH--------------------
T ss_conf 7867997599999678---87899999999998659576760799997799967899999--------------------
Q ss_pred CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf 89910121001232348788035999999999999999999887775205873333346899899998889942110100
Q 001430 423 PRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFL 502 (1079)
Q Consensus 423 pRaPe~YF~~k~d~~~~~~~~~f~~err~mkreYee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~g~~~rdHp~~iqv~l 502 (1079)
+++ ++
T Consensus 81 ----------------------------------~~~-------~~---------------------------------- 85 (472)
T 1xhb_A 81 ----------------------------------ESY-------VK---------------------------------- 85 (472)
T ss_dssp ----------------------------------HHH-------HH----------------------------------
T ss_pred ----------------------------------HHH-------HH----------------------------------
T ss_conf ----------------------------------999-------98----------------------------------
Q ss_pred CCCCCCCCCCCCCC-CEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHC-CC
Q ss_conf 46999787889878-2899961369998867503367999987013579878999338998794699999998442-89
Q 001430 503 GENGGLDAEGNELP-RLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMM-DP 579 (1079)
Q Consensus 503 ~~~g~~d~~~~~lP-~lvYvsRekrpg~~hh~KAGalNallrvSavltngp~il~lDaDh~i~~~~~Lr~amcff~-Dp 579 (1079)
..| ++.++..+++.| +++|+|.+++. +.|+||+.+|+|.. ..|++|.+.+-.+. +|
T Consensus 86 -----------~~~~~v~vi~~~~n~G-----~~~a~N~g~~~----A~gd~i~flD~D~~-~~p~~L~~ll~~~~~~~ 143 (472)
T 1xhb_A 86 -----------KLKVPVHVIRMEQRSG-----LIRARLKGAAV----SRGQVITFLDAHCE-CTAGWLEPLLARIKHDR 143 (472)
T ss_dssp -----------SSSSCEEEEECSSCCC-----HHHHHHHHHHH----CCSSEEEEEESSEE-ECTTCHHHHHHHHHHCT
T ss_pred -----------HCCCCEEEEECCCCCC-----HHHHHHHHHHH----CCCCEEEEECCCEE-ECCCHHHHHHHHHHHCC
T ss_conf -----------7798579998898787-----69999999986----15876999889857-67347999999998399
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=1.00 E-value=1 Score=112.57 Aligned_cols=126 Identities=22% Similarity=0.279 Sum_probs=93.1
Q ss_pred CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99997306999368999999799999999988397999984899906998314278865448874321224442178889
Q 001430 345 PSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPR 424 (1079)
Q Consensus 345 ~~~lp~VDvfV~T~dp~kEpp~v~~nTvls~la~DYP~~kl~~yvsDDG~~~ltf~al~Eaa~FA~~WvPFCkk~~iepR 424 (1079)
....|.|.|.|+||| ++ ..+..++.|+++.+|| .+.++|.|||...-|.+.+.
T Consensus 371 ~~~~~~vsiii~~yn---~~-~~l~~~l~s~~~q~~~--~~eiivvdd~S~d~t~~~~~--------------------- 423 (625)
T 2z86_A 371 LKRVPLVSIYIPAYN---CS-KYIVRCVESALNQTIT--DLEVCICDDGSTDDTLRILQ--------------------- 423 (625)
T ss_dssp CCSSCSEEEEEEESS---CT-TTHHHHHHHHHSSSCC--SEEEEEEEESCSSSHHHHHH---------------------
T ss_pred HCCCCEEEEEEECCC---CH-HHHHHHHHHHHHCCCC--CEEEEEEECCCCHHHHHHHH---------------------
T ss_conf 035971799995789---88-9999999999817699--82899998969864999999---------------------
Q ss_pred CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 91012100123234878803599999999999999999988777520587333334689989999888994211010046
Q 001430 425 APEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGE 504 (1079)
Q Consensus 425 aPe~YF~~k~d~~~~~~~~~f~~err~mkreYee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~g~~~rdHp~~iqv~l~~ 504 (1079)
++ .+
T Consensus 424 ---------------------------------~~-------~~------------------------------------ 427 (625)
T 2z86_A 424 ---------------------------------EH-------YA------------------------------------ 427 (625)
T ss_dssp ---------------------------------HH-------HT------------------------------------
T ss_pred ---------------------------------HH-------HH------------------------------------
T ss_conf ---------------------------------98-------85------------------------------------
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH-CCCCCCC
Q ss_conf 999787889878289996136999886750336799998701357987899933899879469999999844-2899994
Q 001430 505 NGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFM-MDPNLGK 583 (1079)
Q Consensus 505 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvSavltngp~il~lDaDh~i~~~~~Lr~amcff-~Dp~~g~ 583 (1079)
..|++.++. ++.. .+++|+|.+++. ++|+||+.+|+|.+ ..|++|.+.+..| .+|
T Consensus 428 ---------~~~~i~~~~-~~n~-----G~~~a~n~g~~~----a~g~~i~~ld~D~~-~~~~~l~~~~~~~~~~~---- 483 (625)
T 2z86_A 428 ---------NHPRVRFIS-QKNK-----GIGSASNTAVRL----CRGFYIGQLDSDDF-LEPDAVELCLDEFRKDL---- 483 (625)
T ss_dssp ---------TCTTEEEEE-ECCC-----CHHHHHHHHHHH----CCSSEEEECCTTCE-ECTTHHHHHHHHHHHCT----
T ss_pred ---------HCCCEEEEE-CCCC-----CHHHHHHHHHHH----CCCCEEEEECCCCC-CCHHHHHHHHHHHHHCC----
T ss_conf ---------499389991-7988-----989999999985----67787999889766-28359999999998479----
Q ss_pred EEEEEECCCCCCCC
Q ss_conf 08999037201489
Q 001430 584 HVCYVQFPQRFDGI 597 (1079)
Q Consensus 584 ~v~~VQ~PQ~F~ni 597 (1079)
+++.|.....+.+.
T Consensus 484 ~~~~v~~~~~~~~~ 497 (625)
T 2z86_A 484 SLACVYTTNRNIDR 497 (625)
T ss_dssp TCSEEEEEEEEECT
T ss_pred CEEEEEEEEEEECC
T ss_conf 81399820489879
No 8
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=1.00 E-value=1 Score=111.33 Aligned_cols=120 Identities=13% Similarity=0.247 Sum_probs=91.1
Q ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf 73069993689999997999999999883979999848999069983142788654488743212244421788899101
Q 001430 349 AAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEW 428 (1079)
Q Consensus 349 p~VDvfV~T~dp~kEpp~v~~nTvls~la~DYP~~kl~~yvsDDG~~~ltf~al~Eaa~FA~~WvPFCkk~~iepRaPe~ 428 (1079)
|.|.|.||||| ++ ..+..|+.|+++.+|| .+.++|.|||...-|.+.+.+
T Consensus 1 p~vSViIp~yn---~~-~~l~~~l~Sl~~q~~~--~~eiivvDd~S~d~t~~~~~~------------------------ 50 (255)
T 1qg8_A 1 PKVSVIMTSYN---KS-DYVAKSISSILSQTFS--DFELFIMDDNSNEETLNVIRP------------------------ 50 (255)
T ss_dssp CCEEEEEEESS---CT-TTHHHHHHHHHTCSCC--CEEEEEEECSCCHHHHHHHGG------------------------
T ss_pred CEEEEEEECCC---CH-HHHHHHHHHHHHCCCC--CEEEEEEECCCCCHHHHHHHH------------------------
T ss_conf 95999997179---77-8999999999856278--649999978997108999999------------------------
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
Q ss_conf 21001232348788035999999999999999999887775205873333346899899998889942110100469997
Q 001430 429 YFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENGGL 508 (1079)
Q Consensus 429 YF~~k~d~~~~~~~~~f~~err~mkreYee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~g~~~rdHp~~iqv~l~~~g~~ 508 (1079)
++
T Consensus 51 -------------------------------------~~----------------------------------------- 52 (255)
T 1qg8_A 51 -------------------------------------FL----------------------------------------- 52 (255)
T ss_dssp -------------------------------------GG-----------------------------------------
T ss_pred -------------------------------------HH-----------------------------------------
T ss_conf -------------------------------------86-----------------------------------------
Q ss_pred CCCCCCCCCEEEEECC--------CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHC-CC
Q ss_conf 8788987828999613--------69998867503367999987013579878999338998794699999998442-89
Q 001430 509 DAEGNELPRLVYVSRE--------KRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMM-DP 579 (1079)
Q Consensus 509 d~~~~~lP~lvYvsRe--------krpg~~hh~KAGalNallrvSavltngp~il~lDaDh~i~~~~~Lr~amcff~-Dp 579 (1079)
.-|++.|+..+ +. ..+++|+|.+++. ++|+||+.+|+|.+ ..|++|.+.+-.|. +|
T Consensus 53 -----~~~~i~~i~~~~~~~~~~~~n-----~G~~~a~N~gi~~----a~g~~i~~lD~Dd~-~~~~~l~~~~~~~~~~~ 117 (255)
T 1qg8_A 53 -----NDNRVRFYQSDISGVKERTEK-----TRYAALINQAIEM----AEGEYITYATDDNI-YMPDRLLKMVRELDTHP 117 (255)
T ss_dssp -----GSTTEEEEECCCCSHHHHHSS-----CHHHHHHHHHHHH----CCCSEEEEEETTEE-ECTTHHHHHHHHHHHCT
T ss_pred -----HCCCEEEEECCCCCCCCCCCC-----CCHHHHHHHHHHH----CCCCEEEEECCCCC-CCHHHHHHHHHHHHHCC
T ss_conf -----069889996465333222146-----6789999999987----58888999689876-28279999999998589
Q ss_pred CCCCEEEEEECCCCCC
Q ss_conf 9994089990372014
Q 001430 580 NLGKHVCYVQFPQRFD 595 (1079)
Q Consensus 580 ~~g~~v~~VQ~PQ~F~ 595 (1079)
++++|.....+.
T Consensus 118 ----~~~~v~~~~~~~ 129 (255)
T 1qg8_A 118 ----EKAVIYSASKTY 129 (255)
T ss_dssp ----TCCEEEEEEEEE
T ss_pred ----CCEEEEECEEEE
T ss_conf ----905998432899
No 9
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=1.00 E-value=1 Score=105.48 Aligned_cols=111 Identities=16% Similarity=0.196 Sum_probs=79.5
Q ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 97306999368999999799999999988397999984899906998314278865448874321224442178889910
Q 001430 348 LAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPE 427 (1079)
Q Consensus 348 lp~VDvfV~T~dp~kEpp~v~~nTvls~la~DYP~~kl~~yvsDDG~~~ltf~al~Eaa~FA~~WvPFCkk~~iepRaPe 427 (1079)
.|.|.|.||||| ++ ..+..++.|+++++|| .+.+.|.|||.+.-|.+.+.+.
T Consensus 1 Mp~vSVIIp~yN---~~-~~L~~~L~Sll~Qt~~--~~EIIVVDDgStD~t~~il~~~---------------------- 52 (729)
T 3l7i_A 1 MNKLTIIVTYYN---AE-EYITGCLESIKQQRTQ--DFNLIIVNDGSTDQSKKLMDEA---------------------- 52 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEEECCC---CH-HHHHHHHHHHHHCCCC--CEEEEEEECCCCCCHHHHHHHH----------------------
T ss_conf 966999997678---78-9999999999827789--8699999789987579999999----------------------
Q ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 12100123234878803599999999999999999988777520587333334689989999888994211010046999
Q 001430 428 WYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENGG 507 (1079)
Q Consensus 428 ~YF~~k~d~~~~~~~~~f~~err~mkreYee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~g~~~rdHp~~iqv~l~~~g~ 507 (1079)
.+ .+
T Consensus 53 -----------------------------~~----------------------------------~~------------- 56 (729)
T 3l7i_A 53 -----------------------------IK----------------------------------DY------------- 56 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------HH----------------------------------HC-------------
T ss_conf -----------------------------97----------------------------------47-------------
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 787889878289996136999886750336799998701357987899933899879469999999844289
Q 001430 508 LDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDP 579 (1079)
Q Consensus 508 ~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvSavltngp~il~lDaDh~i~~~~~Lr~amcff~Dp 579 (1079)
=+++.|+..++..| .++|.|.+++. +.|+||+.+|+|.+ ..|++|.+.+..+.++
T Consensus 57 -------~~~i~~i~~~~n~G-----~~~arN~gi~~----A~gdyI~flD~Dd~-~~p~~l~~l~~~l~~~ 111 (729)
T 3l7i_A 57 -------DKNIRFIDLDENSG-----HAHARNIALEE----VETPYFMFLDADDE-LASYAITFYLEKFNNT 111 (729)
T ss_dssp ------------------------------------------------------------------------
T ss_pred -------CCCEEEEECCCCCC-----HHHHHHHHHHH----CCCCEEEEECCCCC-CCHHHHHHHHHHHCCC
T ss_conf -------99889998888778-----79999999986----66998999889877-7846999999982379
No 10
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=1.00 E-value=1 Score=102.41 Aligned_cols=111 Identities=17% Similarity=0.211 Sum_probs=84.3
Q ss_pred CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99973069993689999997999999999883979999848999069983142788654488743212244421788899
Q 001430 346 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRA 425 (1079)
Q Consensus 346 ~~lp~VDvfV~T~dp~kEpp~v~~nTvls~la~DYP~~kl~~yvsDDG~~~ltf~al~Eaa~FA~~WvPFCkk~~iepRa 425 (1079)
+..|.|.|.||||| ++ ..+..++.|+++.+|| .+.++|.|||...-|.+.+.
T Consensus 2 ~~~p~vsViIp~yn---~~-~~l~~~l~Sl~~q~~~--~~eiIvvDd~S~d~t~~~~~---------------------- 53 (240)
T 3bcv_A 2 SLIPKVSVIVPIYN---VE-KYLDQCVQALLAQTLS--DIEIILIDDESPDNCPKICD---------------------- 53 (240)
T ss_dssp -CCCSEEEEEEESS---CT-TTHHHHHHHHHTCSSS--SEEEEEEECCCSSSHHHHHH----------------------
T ss_pred CCCCCEEEEEECCC---CH-HHHHHHHHHHHHCCCC--CEEEEEEECCCCCCHHHHHH----------------------
T ss_conf 99984899996689---77-8999999999957689--86999998999867899999----------------------
Q ss_pred CHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 10121001232348788035999999999999999999887775205873333346899899998889942110100469
Q 001430 426 PEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGEN 505 (1079)
Q Consensus 426 Pe~YF~~k~d~~~~~~~~~f~~err~mkreYee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~g~~~rdHp~~iqv~l~~~ 505 (1079)
++ .++
T Consensus 54 --------------------------------~~-------~~~------------------------------------ 58 (240)
T 3bcv_A 54 --------------------------------DY-------AAQ------------------------------------ 58 (240)
T ss_dssp --------------------------------HH-------HHH------------------------------------
T ss_pred --------------------------------HH-------HHH------------------------------------
T ss_conf --------------------------------99-------965------------------------------------
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 99787889878289996136999886750336799998701357987899933899879469999999844289
Q 001430 506 GGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDP 579 (1079)
Q Consensus 506 g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvSavltngp~il~lDaDh~i~~~~~Lr~amcff~Dp 579 (1079)
.|++.|+.. +.. .+++|.|.+++. +.|+||+.+|+|.+ ..|++|.+.+..+.++
T Consensus 59 ---------~~~i~~i~~-~n~-----G~~~a~N~g~~~----a~g~~i~~lD~Dd~-~~~~~l~~l~~~~~~~ 112 (240)
T 3bcv_A 59 ---------YPNIKVIHK-KNA-----GLGMACNSGLDV----ATGEYVAFCDSDDY-VDSDMYMTMYNVAQKY 112 (240)
T ss_dssp ---------CSSEEEEEC-CCC-----CHHHHHHHHHHH----CCSSEEEECCTTCC-CCTTHHHHHHHHHHHH
T ss_pred ---------CCCEEEEEC-CCC-----CHHHHHHHHHHH----CCCCEEEEECCCCC-CCHHHHHHHHHHHHHC
T ss_conf ---------897899988-999-----949999999997----68999999879875-8889999999999846
Done!