BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>001432
MNLKSFTWYVLQCWVLSLLFFKVHGDSVVSVKFLKAPKLFSRLNSATFLFQVLVAGNYNC
TDCRISCKLDDGIASDCGTWEVSYTGLHDGNHTFEVCSYGSQGVGCSSHNWIVDTVPPTA
YITASSSFTNAKNVSVNISFTEPCCSRGGFGCSSVNACNLLVYGAGQVIPSSLITVQRSL
EYSLLVSLSSNVQYGRVILVMDKSFCTDTAGNIFSRAENSSFYVHFDRRSLFVDLRSHVP
EKLLQLNNKTRTVQATNDDEKLKVYLYFSEAVLNSSAEILNSLNSSQGTLVPINGKNRGN
HRFGFMVANISSIAIITVSLKSNSIISRYGTPVLPIDPVTFLYDSQRPAVRLSTTSSTRT
RQDSIPILIKFLKPVFGFNSSLISISGGHLQSFQEIRRSIYILEIQANADTVSVNVPENV
TGDVAGNKNLPSNVLQVKHYSVPTISSTISTFVTAAFVATSVAAGLLTVATSSLLSVGAF
LKPPYSLVSDPARNLFRTACHIQVFALSRWLVDTLPVEYYEFARGIQWSIPYFNLPWETG
QSHPVMVGSSSPDGPHSYISKFNHLAIFQSEQPVAGNSNTDAAVYGSPLTPMEYESFFES
QNIKPEADYLDSNHMNGWREFDRSMFWLAVIGGSLILLHILLVLIVKFRKKNSEKQRGYG
AVTFPRFEIFLIILALPCICKDSAALVEGGARSGLILGILLLAVVSFLLLSLLLFLSVGI
TLGKLLQYKEVHQEGQRFHWYQEIVRVTLGPGKRGQWTWKNQPDSSYLTILGPLFEDLRG
PPKYMLSQISGGNPHKERDRIIASDDETEDAEAPFIQKLFGILRIYYTLLESVKRVSLGI
LAGVYTDDWSSKTPTVVLLCITSFQLFFMVLKKPFIKKKIQLVEIISISCQVGLFTLCLV
FIEKEFSSGGETKVGISMLALFLVGYFAQMINEWYALYRQVKQLDPTTKSLLSGLKVASF
GVLLLVFPQKLTRNLESKFPLDRCGEGVAVDTGSADRIRSSGSRSSGSTDKPWLKQLREM
AKSSFSKERSGTINDPSTSQTKWNGFWSAKRSRSSSSSSDFKSKSKGLYKDLEAIFAAK

High Scoring Gene Products

Symbol, full name Information P value
AT3G48200 protein from Arabidopsis thaliana 3.5e-304

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  001432
        (1079 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2100464 - symbol:AT3G48200 "AT3G48200" species...  2919  3.5e-304  1


>TAIR|locus:2100464 [details] [associations]
            symbol:AT3G48200 "AT3G48200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0000023 "maltose metabolic process" evidence=RCA]
            [GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0009902
            "chloroplast relocation" evidence=RCA] [GO:0010103 "stomatal
            complex morphogenesis" evidence=RCA] [GO:0016556 "mRNA
            modification" evidence=RCA] [GO:0019252 "starch biosynthetic
            process" evidence=RCA] [GO:0043085 "positive regulation of
            catalytic activity" evidence=RCA] EMBL:CP002686
            GenomeReviews:BA000014_GR eggNOG:NOG12793 EMBL:AK226883
            IPI:IPI00534200 RefSeq:NP_566899.1 UniGene:At.26147 STRING:Q0WV86
            PaxDb:Q0WV86 PRIDE:Q0WV86 EnsemblPlants:AT3G48200.1 GeneID:823977
            KEGG:ath:AT3G48200 TAIR:At3g48200 HOGENOM:HOG000083988
            InParanoid:Q0WV86 OMA:HEASKSI PhylomeDB:Q0WV86
            ProtClustDB:CLSN2689049 Genevestigator:Q0WV86 Uniprot:Q0WV86
        Length = 1088

 Score = 2919 (1032.6 bits), Expect = 3.5e-304, P = 3.5e-304
 Identities = 589/1096 (53%), Positives = 732/1096 (66%)

Query:     1 MNLKSFTWYVLQCWVLSL-LFFKVHG--DSVVSVKFLKAPKLFSRLNSATFLFQVLVAGN 57
             M L   +W +L  WV+S  L F+ H    S +SVKFLKAP   SR  SA F F     GN
Sbjct:     1 MGLLKTSWLLLLFWVVSSPLCFRFHYCYGSELSVKFLKAPPTTSRFTSAKFSFLAFEDGN 60

Query:    58 YNCTDCRISCKLDDGIASDCGTWEVSYTGLHDGNHTFEVCSYGSQGVGCSSHNWIVDTVP 117
               C+ C+  CKLDD I+ DC   +VSY+ L DG+HT EVC+    G GC+ +NW VDTV 
Sbjct:    61 RTCSSCKFRCKLDDRISLDCHQRKVSYSKLLDGDHTLEVCANRMHGFGCNHYNWTVDTVS 120

Query:   118 PTAYITASSSFTNAKNVSVNISFTEPCCSRGGFGCSSVNACNLLVYGAGQVIPSSLITVQ 177
             PTA++TAS  FT+A+NVSVNI+FTEPC  RGGFGCSSVN+C+LLVYGAGQVIPSS   + 
Sbjct:   121 PTAFVTASMPFTSAQNVSVNITFTEPCVGRGGFGCSSVNSCDLLVYGAGQVIPSSFTVLD 180

Query:   178 RXXXXXXXXXXXXNVQYGRVILVMDKSFCTDTAGNIFSRAENSSFYVHFDRRSLFVDLRS 237
             +            + QYGR++LVM+KS C+D AGN F RA  S F+VHFDRR++ V+LR+
Sbjct:   181 QYLRYSLLVGLSPDAQYGRIVLVMNKSVCSDIAGNNFKRALGSRFFVHFDRRNVLVNLRT 240

Query:   238 HVPEKLLQLNNKTRTVQATNDDEKLKVYLYFSEAVLNSSAEILNSLNSSQGTLVPINGKN 297
             HVPEKLL+LNN+TRTVQATND+ KL VYLYFSE VLNSSAEIL  LN++QG L+PI+G  
Sbjct:   241 HVPEKLLKLNNQTRTVQATNDNNKLNVYLYFSEPVLNSSAEILRRLNTNQGDLLPIDGNT 300

Query:   298 RGNHRFGFMVANISSIAIITVSLKSNSIISRYGTPVLPIDPVTFLYDSQRPAVXXXXXXX 357
              GN RF FMV N S  AI+TV+L SNSI SR+GTP  P  P+TFLYD++RP V       
Sbjct:   301 NGNRRFAFMVTNTSRRAIVTVTLDSNSIRSRHGTPASPTAPLTFLYDTERPHVILNTTSG 360

Query:   358 XXXXQDSIPILIKFLKPVFGFNSSLISISGGHLQSFQEIRRSIYILEIQANADTVSVNVP 417
                 + +IP+ IKF+KPVFGFNSS +SISGG+L SF+E+  SIYI+ ++AN  T+S+ +P
Sbjct:   361 MRTRKHTIPVWIKFMKPVFGFNSSFVSISGGYLDSFEELSGSIYIVYVKANTSTLSIKIP 420

Query:   418 ENVTGDVAGNKNLPSNVLQVKHYSVPTISSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 477
             ENVT DVAGNKNL SN+L+VKHYSVP ISS I                            
Sbjct:   421 ENVTQDVAGNKNLASNILKVKHYSVPMISSVISWVTTYIFLVTSFVAGLLTLSTTSLYSL 480

Query:   478 XAFLKP-PYSLVSDPARNLFRTACHIQVFALSRWLVDTLPVEYYEFARGIQWSIPYFNLP 536
              AF +P PY L+SDP RNLFRTACHIQ FAL+RWL  TLPV+YYE  RGIQW IPYF LP
Sbjct:   481 GAFPRPSPY-LISDPTRNLFRTACHIQFFALTRWLPVTLPVDYYELVRGIQWIIPYFPLP 539

Query:   537 WETGQSHPVMVGSSSPDGPHSYISKFNHLAIFQSEQPVAGNSNTDAAVYGSPLTPMEYES 596
             WET     +MV +S   GPHS+ISK ++  I      +  ++N ++ V+G PLT MEY  
Sbjct:   540 WETKIKEQIMVATSPYIGPHSFISKTHNNMI-----NLKTSTNAES-VFGLPLTAMEYRL 593

Query:   597 FFESQNIKPEADY-LDSNHMNGWREFDRSMFWLAVIGGSXXXXXXXXXXXXKFRKKNSEK 655
             FFE+ N+KPEA++ L   H   WR+F+R MFW+A+IGGS            KF+K +SEK
Sbjct:   594 FFETSNLKPEAEHVLGLPHSTVWRDFNRIMFWIAIIGGSLVLLHIVLSLILKFKKAHSEK 653

Query:   656 QRGYGAVTFPRFEIFLIILALPCICKDSAALVEG------GARSXXXXXXXXXXXXXXXX 709
             +R +GA  FPRFE+FL+ILALP ICK + +L++G       A +                
Sbjct:   654 KRSFGAFVFPRFELFLLILALPSICKAARSLIQGYFKHQGAAEASVIVGILVLCVVAILL 713

Query:   710 XXXXXXXXXXXXXXKLLQYKEVHQEGQRFHWYQEIVRVTLGPGKRGQWTWKNQPDSSYLT 769
                           KLLQYKE+HQEGQ FHWYQE++RVTLGPGKRGQWTWK + +S YLT
Sbjct:   714 LALFLFLSVGITFGKLLQYKEIHQEGQTFHWYQELIRVTLGPGKRGQWTWKTE-NSVYLT 772

Query:   770 ILGPLFEDLRGPPKYMLSQISGGNPHKERD-RIIASDDETEDAEAPFIQKLFGILRIYYT 828
              LGP+FEDLRGPPKYML+QISG NP K++D RIIASDDE EDAEAP IQKLFGILRIYYT
Sbjct:   773 RLGPVFEDLRGPPKYMLTQISGSNPLKQQDDRIIASDDENEDAEAPCIQKLFGILRIYYT 832

Query:   829 LLESVKRVSLGILAGVYTDDWSSKTPTVVLLCITSFQLFFMVLKKPFIKKKIQLVEIISI 888
              LE+VKRV LGI+AG + D+ ++KTP VVLL ITSFQLFF++LKKPFIKKK+QLVEIISI
Sbjct:   833 FLETVKRVCLGIIAGAFLDNETAKTPIVVLLSITSFQLFFLLLKKPFIKKKVQLVEIISI 892

Query:   889 SCQVGLFTLCLVFIEKEFSSGGETKVGISMLALFLVGYFAQMINEWYALYRQVKQLDPTT 948
             +CQVG+F  CL+ + K+F      K+GI M+ LFL+G+   M NEWY+LY+Q K+LD   
Sbjct:   893 ACQVGVFASCLMLLAKDFPEASGKKLGIFMVVLFLIGFIMLMCNEWYSLYKQTKRLDQIN 952

Query:   949 KSLLSGLKVASFGVLLLVFPQKLTRNLESKFPLDRCGEGVAVDTXXXXXXXXXXXXXXXX 1008
             +S LSGLK+   G+  L+ PQK+ +N      L+         T                
Sbjct:   953 RSFLSGLKMFIIGLAALILPQKMIKNKIPVAQLEARSSSNGGTTPEFRYRNSSGSRSSGS 1012

Query:  1009 TDKPWLKQLREMAKSSFSKERSGTI--NDPSTSQTKWNG-FWXXXXXXXXXXXXXXXXXX 1065
              DKPWLKQ+REMAKSSF+++RS +   +DPS S++ W+   W                  
Sbjct:  1013 LDKPWLKQIREMAKSSFTRDRSNSKVPSDPSCSKSGWSSSIWGTKTSGSSSKESSADYKS 1072

Query:  1066 X--GLYKDLEAIFAAK 1079
                GLYKDLEAIFA+K
Sbjct:  1073 RPKGLYKDLEAIFASK 1088


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0     1079       950   0.00094  122 3  11 22  0.38    34
                                                     38  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  631 (67 KB)
  Total size of DFA:  474 KB (2221 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  71.62u 0.14s 71.76t   Elapsed:  00:00:04
  Total cpu time:  71.63u 0.14s 71.77t   Elapsed:  00:00:04
  Start:  Tue May 21 22:11:34 2013   End:  Tue May 21 22:11:38 2013

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