Query 001432
Match_columns 1079
No_of_seqs 69 out of 71
Neff 3.5
Searched_HMMs 13730
Date Tue Mar 26 21:40:27 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/001432.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H2_31-35//hhsearch_scop/001432hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1g0da3 b.1.5.1 (A:584-684) Tr 9.7 30 0.0022 9.2 7.8 79 118-204 2-85 (101)
2 d1ex0a3 b.1.5.1 (A:628-727) Tr 7.9 39 0.0028 8.3 7.9 74 117-198 2-77 (100)
3 d1vjja3 b.1.5.1 (A:594-692) Tr 7.4 43 0.0031 8.0 8.7 74 118-199 1-77 (99)
4 d1x4xa1 b.1.2.1 (A:8-100) Fibr 5.9 58 0.0042 7.1 6.4 37 81-118 55-92 (93)
5 d2q3za3 b.1.5.1 (A:586-683) Tr 5.2 67 0.0049 6.6 7.7 78 118-202 2-84 (98)
6 d1x5wa1 g.37.1.1 (A:8-35) Zinc 4.7 77 0.0056 6.1 0.0 10 59-68 4-13 (28)
7 d1wfua_ b.1.2.1 (A:) Fibronect 4.5 79 0.0058 6.0 4.1 10 135-144 31-40 (120)
8 d1wf5a1 b.1.2.1 (A:8-115) Side 4.5 81 0.0059 6.0 3.7 22 82-103 71-93 (108)
9 d1qbea_ d.85.1.1 (A:) Qbeta co 4.3 85 0.0062 5.8 4.3 78 81-164 5-86 (132)
10 d1x5aa1 b.1.2.1 (A:8-101) Ephr 4.1 91 0.0066 5.6 4.9 38 81-118 56-94 (94)
No 1
>d1g0da3 b.1.5.1 (A:584-684) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]}
Probab=9.72 E-value=30 Score=9.21 Aligned_cols=79 Identities=19% Similarity=0.197 Sum_probs=51.4
Q ss_pred CCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCE---EEEECCCEEEEEEEECCCCEE
Q ss_conf 82111058665765207999995145458998422466630069942641135650---784218269999960465123
Q 001432 118 PTAYITASSSFTNAKNVSVNISFTEPCCSRGGFGCSSVNACNLLVYGAGQVIPSSL---ITVQRSLEYSLLVSLSSNVQY 194 (1079)
Q Consensus 118 PTa~Its~~~~Tna~nVTV~ItFSE~~tg~GGF~cssinacdl~V~G~G~V~pSsl---~vi~pg~~YSl~VtlS~~~~~ 194 (1079)
|...|.-.-..-.+...++.|+|..|-. .. ...|-+.+.|+|-..+-.. ..+.||-+.+..+..-|.- .
T Consensus 2 P~l~I~v~g~~~v~~~~~v~vsf~NPL~----~~---L~~c~~~vEG~GL~~~~~~~~~~~v~p~~~~~~~~~~~P~~-~ 73 (101)
T d1g0da3 2 PELLVQVPGKAVVWEPLTAYVSFTNPLP----VP---LKGGVFTLEGAGLLSATQIHVNGAVAPSGKVSVKLSFSPMR-T 73 (101)
T ss_dssp CCCEEECCSCEETTCCEEEEEEEECCSS----SC---EESCEEEEEETTTEEEEEEECSSEECTTCEEEEEEEECCSS-C
T ss_pred CCEEEEECCCCCCCCEEEEEEEEECCCC----CE---ECCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEEEECCC-C
T ss_conf 9779996997272970899999989998----70---00799999939988650787258729999899999997088-3
Q ss_pred EEEE--EEECCC
Q ss_conf 2999--993066
Q 001432 195 GRVI--LVMDKS 204 (1079)
Q Consensus 195 GrVi--l~ma~n 204 (1079)
|.-. +.++.+
T Consensus 74 G~~~L~a~f~s~ 85 (101)
T d1g0da3 74 GVRKLLVDFDSD 85 (101)
T ss_dssp EEEEEEEEEECS
T ss_pred CCEEEEEEEECC
T ss_conf 027999998474
No 2
>d1ex0a3 b.1.5.1 (A:628-727) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]}
Probab=7.92 E-value=39 Score=8.33 Aligned_cols=74 Identities=15% Similarity=0.147 Sum_probs=49.4
Q ss_pred CCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCC--CEEEEECCCEEEEEEEECCCCEE
Q ss_conf 9821110586657652079999951454589984224666300699426411356--50784218269999960465123
Q 001432 117 PPTAYITASSSFTNAKNVSVNISFTEPCCSRGGFGCSSVNACNLLVYGAGQVIPS--SLITVQRSLEYSLLVSLSSNVQY 194 (1079)
Q Consensus 117 pPTa~Its~~~~Tna~nVTV~ItFSE~~tg~GGF~cssinacdl~V~G~G~V~pS--sl~vi~pg~~YSl~VtlS~~~~~ 194 (1079)
-|+..|.-.-....+...++.|+|..|-. .. ..+|-+.+.|+|-..+- ....+.|+-+.+..+...|.- .
T Consensus 2 ~P~l~I~v~g~~~v~~~~~v~v~F~NPL~----~~---L~nc~~~vEG~GL~~~~~~~~~~v~p~~~~~~~~~~~P~~-~ 73 (100)
T d1ex0a3 2 IPEIIIKVRGTQVVGSDMTVTVQFTNPLK----ET---LRNVWVHLDGPGVTRPMKKMFREIRPNSTVQWEEVCRPWV-S 73 (100)
T ss_dssp CCCCEEEEEECCBTTSCEEEEEEEECCSS----SC---EEEEEEEEEETTTEEEEEEEEEEECTTCEEEEEEEECCSS-C
T ss_pred CCCEEEEECCCCCCCCEEEEEEEEECCCC----CC---HHCEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEECCC-C
T ss_conf 88689996997443970899999989998----72---1179999992897500699658609899999999996188-3
Q ss_pred EEEE
Q ss_conf 2999
Q 001432 195 GRVI 198 (1079)
Q Consensus 195 GrVi 198 (1079)
|.-.
T Consensus 74 G~~~ 77 (100)
T d1ex0a3 74 GHRK 77 (100)
T ss_dssp EEEE
T ss_pred CCEE
T ss_conf 1379
No 3
>d1vjja3 b.1.5.1 (A:594-692) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]}
Probab=7.37 E-value=43 Score=8.02 Aligned_cols=74 Identities=22% Similarity=0.276 Sum_probs=49.9
Q ss_pred CCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCC---CEEEEECCCEEEEEEEECCCCEE
Q ss_conf 821110586657652079999951454589984224666300699426411356---50784218269999960465123
Q 001432 118 PTAYITASSSFTNAKNVSVNISFTEPCCSRGGFGCSSVNACNLLVYGAGQVIPS---SLITVQRSLEYSLLVSLSSNVQY 194 (1079)
Q Consensus 118 PTa~Its~~~~Tna~nVTV~ItFSE~~tg~GGF~cssinacdl~V~G~G~V~pS---sl~vi~pg~~YSl~VtlS~~~~~ 194 (1079)
|...|.-.-..-.+...++.|+|..|-. .. ...|-+.+.|+|-..+. ....+.|+-+.++.+...|.- .
T Consensus 1 P~l~I~v~~~~~v~~~~~v~vsf~NPL~----~~---L~~c~f~vEG~GL~~~~~~~~~~~v~p~~~~~~~~~~~P~~-~ 72 (99)
T d1vjja3 1 PTLTLEVLNEARVRKPVNVQMLFSNPLD----EP---VRDCVLMVEGSGLLLGNLKIDVPTLGPKERSRVRFDILPSR-S 72 (99)
T ss_dssp CCEEEEECSCCBTTSCEEEEEEEECCSS----SC---BCSEEEEEECTTTSSSCEEEEECCBCTTCEEEEEEEECCCS-C
T ss_pred CCEEEEECCCCCCCCEEEEEEEEECCCC----CC---HHCEEEEEEECCCCCCCEEEECCCCCCCCEEEEEEEEECCC-C
T ss_conf 9779996997372973999999989998----70---02799999909988763797658629898999999997088-2
Q ss_pred EEEEE
Q ss_conf 29999
Q 001432 195 GRVIL 199 (1079)
Q Consensus 195 GrVil 199 (1079)
|.-.|
T Consensus 73 G~~~l 77 (99)
T d1vjja3 73 GTKQL 77 (99)
T ss_dssp EEEEE
T ss_pred CCEEE
T ss_conf 22799
No 4
>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.85 E-value=58 Score=7.07 Aligned_cols=37 Identities=22% Similarity=0.239 Sum_probs=20.7
Q ss_pred CEEECCCC-CCCEEEEEEEECCCCCCCCCEEEEEECCCC
Q ss_conf 62211478-875799999707889876400268631798
Q 001432 81 EVSYTGLH-DGNHTFEVCSYGSQGVGCSSHNWIVDTVPP 118 (1079)
Q Consensus 81 ~vs~s~L~-DG~HTF~V~A~~~~G~~~AsysWTVDTtpP 118 (1079)
...+++|. +-.+.|.|+|....|.++.+- +..=+|+|
T Consensus 55 ~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~-~~~~~Tpp 92 (93)
T d1x4xa1 55 SYEIKGLSPATTYYCRVQALSVVGAGPFSE-VVACVTPP 92 (93)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCC-CEEEECCC
T ss_pred EEEECCCCEEEEEEEEEEEEECCCCCCCCC-CEEEEECC
T ss_conf 899965540027889999997985838978-68999398
No 5
>d2q3za3 b.1.5.1 (A:586-683) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}
Probab=5.19 E-value=67 Score=6.58 Aligned_cols=78 Identities=15% Similarity=0.262 Sum_probs=48.7
Q ss_pred CCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCC-CE---EEEECCCEEEEEEEECCCCE
Q ss_conf 821110586657652079999951454589984224666300699426411356-50---78421826999996046512
Q 001432 118 PTAYITASSSFTNAKNVSVNISFTEPCCSRGGFGCSSVNACNLLVYGAGQVIPS-SL---ITVQRSLEYSLLVSLSSNVQ 193 (1079)
Q Consensus 118 PTa~Its~~~~Tna~nVTV~ItFSE~~tg~GGF~cssinacdl~V~G~G~V~pS-sl---~vi~pg~~YSl~VtlS~~~~ 193 (1079)
|+..|.-.-....+..+++.|+|..|-. .. ...|-+.+.|+|-..+. .. ..+.||-+-+..+.+.|.-.
T Consensus 2 P~l~I~v~g~~~vg~~~~v~vsF~NPL~----~~---L~~c~~~vEG~GL~~~~~~~~~~~~v~pg~~~~~~~~~~P~~~ 74 (98)
T d2q3za3 2 PEIKIRILGEPKQKRKLVAEVSLQNPLP----VA---LEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLVPLHM 74 (98)
T ss_dssp CCCEEEEESCCSSSSCEEEEEEEECCSS----SC---BCSEEEEEECTTTCSSCEEEEECSCBCTTCEEEEEEEECCCSS
T ss_pred CCEEEEECCCCCCCCEEEEEEEEECCCC----CC---HHCEEEEEECCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCC
T ss_conf 9769997997373974899999989998----70---0178999991886767579858873199999999999980884
Q ss_pred -EEEEEEEEC
Q ss_conf -329999930
Q 001432 194 -YGRVILVMD 202 (1079)
Q Consensus 194 -~GrVil~ma 202 (1079)
.-++++.++
T Consensus 75 G~~~L~a~f~ 84 (98)
T d2q3za3 75 GLHKLVVNFE 84 (98)
T ss_dssp SCEEEEEEEE
T ss_pred CCEEEEEEEE
T ss_conf 2379999986
No 6
>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.65 E-value=77 Score=6.14 Aligned_cols=10 Identities=40% Similarity=1.361 Sum_probs=6.3
Q ss_pred CCCCEEEEEE
Q ss_conf 6854249987
Q 001432 59 NCTDCRISCK 68 (1079)
Q Consensus 59 ~C~~csf~Ck 68 (1079)
-|..|+|+|+
T Consensus 4 kc~ecsyscs 13 (28)
T d1x5wa1 4 KCSECSYSCS 13 (28)
T ss_dssp ECSSSSCEES
T ss_pred CCCCCCCCCC
T ss_conf 4765645568
No 7
>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.54 E-value=79 Score=6.04 Aligned_cols=10 Identities=10% Similarity=0.169 Sum_probs=4.4
Q ss_pred EEEEEECCCC
Q ss_conf 9999951454
Q 001432 135 SVNISFTEPC 144 (1079)
Q Consensus 135 TV~ItFSE~~ 144 (1079)
++.++|..|-
T Consensus 31 sv~l~W~~P~ 40 (120)
T d1wfua_ 31 SIELYWDLEQ 40 (120)
T ss_dssp EEEEECTTTS
T ss_pred EEEEEEECCC
T ss_conf 8999987982
No 8
>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.48 E-value=81 Score=5.99 Aligned_cols=22 Identities=27% Similarity=0.572 Sum_probs=8.5
Q ss_pred EEECCCCCC-CEEEEEEEECCCC
Q ss_conf 221147887-5799999707889
Q 001432 82 VSYTGLHDG-NHTFEVCSYGSQG 103 (1079)
Q Consensus 82 vs~s~L~DG-~HTF~V~A~~~~G 103 (1079)
.+..||..| .+.|.|+|....|
T Consensus 71 ~~i~~L~p~t~Y~frV~A~N~~G 93 (108)
T d1wf5a1 71 VTVKGLVPARSYQFRLCAVNDVG 93 (108)
T ss_dssp EEEESCCTTCEEEEEEEEEESSC
T ss_pred EEECCCCCCCEEEEEEEEECCCC
T ss_conf 99888899999999999985985
No 9
>d1qbea_ d.85.1.1 (A:) Qbeta coat protein {Bacteriophage Qbeta [TaxId: 39803]}
Probab=4.31 E-value=85 Score=5.83 Aligned_cols=78 Identities=22% Similarity=0.367 Sum_probs=46.4
Q ss_pred CEEECCC-CCCCEEEEEEE---ECCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 6221147-88757999997---0788987640026863179821110586657652079999951454589984224666
Q 001432 81 EVSYTGL-HDGNHTFEVCS---YGSQGVGCSSHNWIVDTVPPTAYITASSSFTNAKNVSVNISFTEPCCSRGGFGCSSVN 156 (1079)
Q Consensus 81 ~vs~s~L-~DG~HTF~V~A---~~~~G~~~AsysWTVDTtpPTa~Its~~~~Tna~nVTV~ItFSE~~tg~GGF~cssin 156 (1079)
.+++++. +||+.|+...- |..+|.++-+-+=.|-...--++++..++.-|--|..|+|....|.. |...-
T Consensus 5 ~vTLs~IGK~G~~TL~L~PRGVNPTNGVaslseagavpalekrvtvsv~qpsrnrknykvqvk~qnpta------ct~~g 78 (132)
T d1qbea_ 5 TVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVPALEKRVTVSVSQPSRNRKNYKVQVKIQNPTA------CTANG 78 (132)
T ss_dssp CEEEEEESTTSCEEEEEEEEEEETTTTEEEEEETTCCGGGCCEEEEEEECC-----CEEEEEEEEEEEE------EC---
T ss_pred EEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHHHEEEEEECCCCCCCCCEEEEEEECCCCC------CCCCC
T ss_conf 787513456784578716777588631231654567420120478983166667665068999528862------02488
Q ss_pred CCCEEEEC
Q ss_conf 30069942
Q 001432 157 ACNLLVYG 164 (1079)
Q Consensus 157 acdl~V~G 164 (1079)
+||-.|..
T Consensus 79 ~cdpsvtr 86 (132)
T d1qbea_ 79 SCDPSVTR 86 (132)
T ss_dssp -CCCEEEE
T ss_pred CCCCCCCC
T ss_conf 75852000
No 10
>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.08 E-value=91 Score=5.61 Aligned_cols=38 Identities=29% Similarity=0.285 Sum_probs=20.1
Q ss_pred CEEECCCC-CCCEEEEEEEECCCCCCCCCEEEEEECCCC
Q ss_conf 62211478-875799999707889876400268631798
Q 001432 81 EVSYTGLH-DGNHTFEVCSYGSQGVGCSSHNWIVDTVPP 118 (1079)
Q Consensus 81 ~vs~s~L~-DG~HTF~V~A~~~~G~~~AsysWTVDTtpP 118 (1079)
.++++||. +-...|.|+|....|.++-+-.-.+-|.||
T Consensus 56 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~PP 94 (94)
T d1x5aa1 56 RVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPP 94 (94)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCC
T ss_conf 999979979989999999986986829999889990899
Done!