Query 001433
Match_columns 1079
No_of_seqs 455 out of 2943
Neff 8.0
Searched_HMMs 29240
Date Tue Mar 26 15:49:40 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001433.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_736-740//hhsearch_pdb/001433hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dfs_A Myosin-5A; myosin-V, in 1.0 1 1 1220.6 61.5 577 1-579 365-972 (1080)
2 1i84_S Smooth muscle myosin he 1.0 1 1 1028.1 40.7 417 1-417 391-837 (1184)
3 1kk8_A Myosin heavy chain, str 1.0 1 1 950.7 34.0 416 1-417 388-824 (837)
4 4anj_A Unconventional myosin-V 1.0 1 1 938.1 31.5 427 1-447 380-829 (1052)
5 1w7j_A Myosin VA; motor protei 1.0 1 1 930.2 35.2 399 1-401 365-794 (795)
6 2ycu_A Non muscle myosin 2C, a 1.0 1 1 921.7 32.4 417 1-417 360-806 (995)
7 1g8x_A Myosin II heavy chain f 1.0 1 1 907.6 47.4 420 1-437 383-809 (1010)
8 4db1_A Myosin-7; S1DC, cardiac 1.0 1 1 876.1 25.1 374 1-375 389-782 (783)
9 2v26_A Myosin VI; calmodulin-b 1.0 1 1 873.5 31.0 386 1-389 376-784 (784)
10 1w9i_A Myosin II heavy chain; 1.0 1 1 869.2 28.0 377 1-379 383-767 (770)
No 1
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=1.00 E-value=1 Score=1220.57 Aligned_cols=577 Identities=40% Similarity=0.673 Sum_probs=538.7
Q ss_pred CCCHHHHHHHHHHCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99978899988333586369368821898789999999999999898999999997105999999831311123677556
Q 001433 1 MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESF 80 (1079)
Q Consensus 1 ~~~~~~l~~~l~~r~~~~~~e~~~~~l~~~~a~~~rd~lak~lY~~LF~wiv~~iN~~l~~~~~~~~~IgvLDi~GFe~f 80 (1079)
|||+++|.++||+|++.+++|.+++|+++++|..+||||||+||++||+|||.+||.+|+++.+...|||||||||||+|
T Consensus 365 gv~~~~L~~~l~~~~~~~~~e~i~~~~~~~qa~~~rdalak~lY~~LF~wlV~~iN~~l~~~~~~~~~IgvLDI~GFE~f 444 (1080)
T 2dfs_A 365 GVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETF 444 (1080)
T ss_dssp TCCHHHHHHHHHEEEECC----EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCCCEEEEEEEECCCCCC
T ss_pred CCCHHHHHHHHCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
T ss_conf 98999999974366899589418858988999999999999999989999999999862365345725776326776666
Q ss_pred CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHH
Q ss_conf 67844576653202788768878454445855310287432245458087899762078723473587505999975999
Q 001433 81 KTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETF 160 (1079)
Q Consensus 81 ~~nsfeqlciNyanEklq~~f~~~~f~~e~~ey~~E~i~~~~i~~~dn~~~i~li~~~~~Gil~lLdee~~~p~~~d~~~ 160 (1079)
+.|||||||||||||||||+||+|+|+.||+||.+|||+|++|+|.||++|||||+++ .|||++|||||++|++||++|
T Consensus 445 ~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dn~~~idlie~~-~Gil~lLdee~~~p~~tD~~f 523 (1080)
T 2dfs_A 445 EINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTW 523 (1080)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCCCCCCCHHHHHHHHST-TSHHHHHHHHTTSTTCCHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC-CCEEEECCCCCCCCCCCHHHH
T ss_conf 7577999998755689999999876388998775359863103665658899988367-861322431015999872899
Q ss_pred HHHHHHHH-CCCCCCCCCCCCCCCEEEEECCCCEEEECCCCHHHCCHHHHHHHHHHHHHC-CCCCCCCCCCCCCHH----
Q ss_conf 99999883-299986789889987489970864278463202320313259999998514-784311254443000----
Q 001433 161 AQKLYQTF-KNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSAS-KCSFVSSLFLPLAEE---- 234 (1079)
Q Consensus 161 ~~kl~~~~-~~~~~~~~p~~~~~~F~i~H~ag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S-~~~~i~~lf~~~~~~---- 234 (1079)
++||++.| ++|++|.+|+.+...|+|+||||+|+|+++||++||+|+++++++.+|++| +++||+.||+.....
T Consensus 524 ~~kl~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~~v~~lf~~~~~~~~~~ 603 (1080)
T 2dfs_A 524 AQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPT 603 (1080)
T ss_dssp HHHHHHHHBTTBSSEECCTTCSSEEEEECSSCEEEEECTTHHHHHBCCCCHHHHHHHHTCSSCSHHHHSCC---------
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEEEEEHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
T ss_conf 99999985157988547888899548771625799702558874346455999999871243279999845543233555
Q ss_pred -----------------------CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
Q ss_conf -----------------------048888863679789999999998537898245622899989987665011668763
Q 001433 235 -----------------------SSKTSKFSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLR 291 (1079)
Q Consensus 235 -----------------------~~~~~k~~tv~~~f~~~l~~Lm~~l~~t~~hfirCikpN~~~~~~~fd~~~v~~Qlr 291 (1079)
..+..+++||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++|||
T Consensus 604 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr 683 (1080)
T 2dfs_A 604 SATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLR 683 (1080)
T ss_dssp ----------------------------CCCBHHHHHHHHHHHHHHHHHSSEEEEEEEECCCSSCCTTCCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHCCHHHHHHHHH
T ss_conf 44434556433234465445666554677885899999999999999970698668875688878810067786287985
Q ss_pred CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC--CCCEECCCEEEEECCCCCCCHHH
Q ss_conf 1551367999840799866958899987232104579997289999999865198--87000541034403443310111
Q 001433 292 CGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKTKVFLRAGQMADLDAR 369 (1079)
Q Consensus 292 ~~gile~~~~~~~gyp~r~~~~~F~~ry~~l~~~~~~~~~~~~~~~~~il~~~~~--~~~~iG~tkVFlr~~~~~~Le~~ 369 (1079)
|+||+|++||+++|||+|++|.+|+.||++|+|...... |.+++|+.||..+++ ++|++|+||||||+|+++.||.+
T Consensus 684 ~~GvlE~iri~r~Gyp~R~~~~eF~~RY~~L~~~~~~~~-d~k~~~~~il~~~~~~~~~~~~G~TKVF~r~g~l~~LE~~ 762 (1080)
T 2dfs_A 684 ACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLS-DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKI 762 (1080)
T ss_dssp TTTHHHHHHHHTTSCCEEEEHHHHHHHHTTTSCGGGCCS-SHHHHHHHHHTTTSCCGGGEEECSSEEEECTTHHHHHHHH
T ss_pred HCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHHHHCCCHHHHEECCCCCHHCCCHHHHHHHH
T ss_conf 266177775875387851148899999999777667777-7479999999983688145143033000022025677777
Q ss_pred HHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 23210103689988853100010023111235665667763011001011101012445789999999999999645679
Q 001433 370 RTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMCFSA 449 (1079)
Q Consensus 370 r~~~l~~~a~~IQ~~~R~~l~Rk~y~~~r~a~i~iQ~~~Rg~lar~~~~~~r~~~AAi~IQ~~~R~~~~rk~y~~~r~a~ 449 (1079)
|.+++..+|+.||+.||||++|++|.+++.+++.||++|||+++|+.+..+|+..||++||++||||.+|+.|..++.++
T Consensus 763 R~~~l~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aa 842 (1080)
T 2dfs_A 763 RADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDAT 842 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88888877778888877889999850127789999999999887620221220046777878875499999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998633589999999999999999987679999987686999999999999999999999999
Q 001433 450 VCIQTGMRGMAARNELRFRRQTRASILIQSHCRKYLARLHYMKLKKAAITTQCAWRGKVARRELRKLKMAARETGALQAA 529 (1079)
Q Consensus 450 ~~iQ~~~Rg~~ar~~~~~~~~~~aa~~IQ~~~R~~~~r~~~~~~~~a~v~iQ~~~R~~~arr~~~~lk~~a~~~~~L~~~ 529 (1079)
+.||+.|||+.+|+.+..++.+.+++.||++||+|.+|+.|.+.+++++.+|+.||++.+|+++..++.+++++.++++.
T Consensus 843 i~IQs~~Rg~laRr~~~~lr~~~aav~IQ~~~Rg~l~R~~y~~~~~aai~iQs~~R~~laRr~~~~Lk~ear~~~~l~~~ 922 (1080)
T 2dfs_A 843 IALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKL 922 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHTTTC-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998899999999999877888999999999999998887766999999999999999999999999876778999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999988699999999999999999999999999
Q 001433 530 KNKLEKQVEELTWRLQLEKRMRVDMEEAKTQENAKLQSALQEMQLQFKES 579 (1079)
Q Consensus 530 ~~~LE~ki~el~~rL~~E~~~~~~le~~~~~e~~~L~~~l~~le~~l~~~ 579 (1079)
+.+||+++.+|+++++.+++.+..+.+.......++..++.+|+.+++++
T Consensus 923 ~~~LE~kl~eLq~rL~~~e~~n~~L~~~~~~~~~~~~~e~~~L~~~l~~l 972 (1080)
T 2dfs_A 923 HIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERL 972 (1080)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88899999999999999999999999999875678999999999999999
No 2
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=1.00 E-value=1 Score=1028.11 Aligned_cols=417 Identities=37% Similarity=0.672 Sum_probs=388.7
Q ss_pred CCCHHHHHHHHHHCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCC
Q ss_conf 99978899988333586369368821898789999999999999898999999997105999-99983131112367755
Q 001433 1 MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQD-PNSKSLIGVLDIYGFES 79 (1079)
Q Consensus 1 ~~~~~~l~~~l~~r~~~~~~e~~~~~l~~~~a~~~rd~lak~lY~~LF~wiv~~iN~~l~~~-~~~~~~IgvLDi~GFe~ 79 (1079)
|||+++|.++||+|++.+++|.+++++++++|..+||||||+||++||+|||.+||.+|++. .....|||||||||||+
T Consensus 391 g~~~~~l~~~l~~~~~~~~~e~~~~~~~~~~a~~~rdalak~lY~~lF~wlv~~iN~~l~~~~~~~~~~IgvLDi~GFE~ 470 (1184)
T 1i84_S 391 GINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFLGILDIAGFEI 470 (1184)
T ss_dssp TSCHHHHHHHHHSCCCCCTTSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC------CEEEEEEECCCCCC
T ss_pred CCCHHHHHHHHCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
T ss_conf 98999999975584788388048508999999999999999999999999999998863788667753588862478677
Q ss_pred CCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHHCC--CCCHHHHHHHHHCCCCCC
Q ss_conf 6678445766532027887688784544458553102874322454-5808789976207--872347358750599997
Q 001433 80 FKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEF-VDNQDILDLIEKK--PGGIIALLDEACMFPRST 156 (1079)
Q Consensus 80 f~~nsfeqlciNyanEklq~~f~~~~f~~e~~ey~~E~i~~~~i~~-~dn~~~i~li~~~--~~Gil~lLdee~~~p~~~ 156 (1079)
|+.||||||||||||||||++||+|+|+.||+||.+|||+|++|+| .||++|||||+++ |.|||++|||||++|++|
T Consensus 471 f~~NsfeQlciNy~nEkLq~~f~~~~f~~eq~ey~~Egi~~~~i~~~~dn~~~~~lie~~~~~~Gil~lLdee~~~p~~t 550 (1184)
T 1i84_S 471 FEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKAT 550 (1184)
T ss_dssp CSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCSCCCCCCCCCCHHHHHTTSCCSSSCCHHHHHHHTTSCTTCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC
T ss_conf 77443999988998899999998765499999999649975013657782899999837899997212204651899997
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCC--CCCCEEEEECCCCEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 59999999988329998678988--9987489970864278463202320313259999998514784311254443000
Q 001433 157 HETFAQKLYQTFKNHKRFSKPKL--ARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEE 234 (1079)
Q Consensus 157 d~~~~~kl~~~~~~~~~~~~p~~--~~~~F~i~H~ag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S~~~~i~~lf~~~~~~ 234 (1079)
|.+|++||++.|++|++|.+|+. +...|+|+||||+|+|+++||++||+|+++++++.+|++|+++||+.||++....
T Consensus 551 d~~~~~kl~~~~~~~~~~~~~~~~~~~~~F~i~Hyag~V~Y~~~gfl~kN~d~l~~~~~~ll~~s~~~~~~~lf~~~~~~ 630 (1184)
T 1i84_S 551 DTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRI 630 (1184)
T ss_dssp HHHHHHHHHHHTSSCTTEEECSSCTTTCEEEEECSSCEEEEECTTHHHHHHCCCCHHHHHHHHTCSCHHHHHHHSCCTTC
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCC
T ss_conf 69999999997378978157987889992799889746986268813422573219999999958539999985020233
Q ss_pred ------------------CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHH
Q ss_conf ------------------04888886367978999999999853789824562289998998766501166876315513
Q 001433 235 ------------------SSKTSKFSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVM 296 (1079)
Q Consensus 235 ------------------~~~~~k~~tv~~~f~~~l~~Lm~~l~~t~~hfirCikpN~~~~~~~fd~~~v~~Qlr~~gil 296 (1079)
..++++++||+++|+.||+.||++|++|+||||||||||+.+.|+.||+.+|++||||+||+
T Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~~l~~L~~~l~~t~phfvRCIkPN~~k~p~~fd~~~V~~QLr~~Gvl 710 (1184)
T 1i84_S 631 VGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVL 710 (1184)
T ss_dssp CCC---------------------CCCHHHHHHHHHHHHHHHHTTSEEEECCEECCCSSCCSSCCCHHHHHHHHHHTTHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCH
T ss_conf 43322345555566765566688777279999999999999998369886156577886789866678879998506864
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHHHHCCCC--CCEECCCEEEEECCCCCCCHHHHHHH
Q ss_conf 679998407998669588999872321045799-972899999998651988--70005410344034433101112321
Q 001433 297 EAIRISCAGYPTRKPFDEFVDRFGILASKVLDG-SSDEVTACKRLLEKVGLE--GYQIGKTKVFLRAGQMADLDARRTEV 373 (1079)
Q Consensus 297 e~~~~~~~gyp~r~~~~~F~~ry~~l~~~~~~~-~~~~~~~~~~il~~~~~~--~~~iG~tkVFlr~~~~~~Le~~r~~~ 373 (1079)
|++||+++|||+|++|.+|+.||++|.|..++. ..|.+.+|..+|..++++ .|++|+||||||+|.++.||.+|..+
T Consensus 711 E~iri~r~Gfp~R~~~~~F~~ry~~L~~~~~~~~~~d~k~~~~~lL~~l~l~~~~~~iG~TKVF~r~g~l~~LE~~r~~~ 790 (1184)
T 1i84_S 711 EGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLK 790 (1184)
T ss_dssp HHHHHHHHSCCEEEEHHHHHHHTTTTCTTTSCSSCCCHHHHHHHHHHTTTCCTTTCCBCSSEEEECTTHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCEEEEEECHHHHHHHHHHHHH
T ss_conf 77776863586435699999999974636477677788999999999759991204676758998001899999999999
Q ss_pred CCHHHHHHHHHHHHCCCCHHHHHHH---HHHHHHHHHHHHHCCCHHC
Q ss_conf 0103689988853100010023111---2356656677630110010
Q 001433 374 LGRSASIIQRKVRSYLSRKNYIMLR---RSAIHIQAACRGQLARTVY 417 (1079)
Q Consensus 374 l~~~a~~IQ~~~R~~l~Rk~y~~~r---~a~i~iQ~~~Rg~lar~~~ 417 (1079)
+..+++.||+.||||++|++|.+++ .+++.||++||+|++++.|
T Consensus 791 l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~ 837 (1184)
T 1i84_S 791 ITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW 837 (1184)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999987410
No 3
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=1.00 E-value=1 Score=950.70 Aligned_cols=416 Identities=41% Similarity=0.702 Sum_probs=388.0
Q ss_pred CCCHHHHHHHHHHCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99978899988333586369368821898789999999999999898999999997105999999831311123677556
Q 001433 1 MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESF 80 (1079)
Q Consensus 1 ~~~~~~l~~~l~~r~~~~~~e~~~~~l~~~~a~~~rd~lak~lY~~LF~wiv~~iN~~l~~~~~~~~~IgvLDi~GFe~f 80 (1079)
|||+++|.++||+|++.+++|.+++++++++|..+||||||+||++||+|||.+||.+|+++.....+||||||||||+|
T Consensus 388 gv~~~~L~~aL~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~~~~~~~IGvLDI~GFE~f 467 (837)
T 1kk8_A 388 GINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDIAGFEIF 467 (837)
T ss_dssp TSCHHHHHHHHHSCEEC----CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC
T ss_pred CCCHHHHHHHHCCCEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
T ss_conf 98999999973374887287069728999999999999999999999999999999860588878626898735775656
Q ss_pred CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHH
Q ss_conf 678445766532027887688784544458553102874322454-5808789976207872347358750599997599
Q 001433 81 KTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEF-VDNQDILDLIEKKPGGIIALLDEACMFPRSTHET 159 (1079)
Q Consensus 81 ~~nsfeqlciNyanEklq~~f~~~~f~~e~~ey~~E~i~~~~i~~-~dn~~~i~li~~~~~Gil~lLdee~~~p~~~d~~ 159 (1079)
+.|||||||||||||||||+|++|+|+.||+||.+|||+|++|+| .||++|||||++ |.|||++|||||++|++||++
T Consensus 468 ~~NsFEQlcINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek-p~GIlslLDEec~~p~~tD~t 546 (837)
T 1kk8_A 468 DFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDKS 546 (837)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCCCCHHHHHHHHHHHS-TTSHHHHHHHHTTCTTCCHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHC-CCCHHHHHHHHHCCCCCCHHH
T ss_conf 6441899998875689999987752088898763048762432666677999999726-876888878875499987589
Q ss_pred HHHHHHH-HHCCCCCCCCCCCC------CCCEEEEECCCCEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 9999998-83299986789889------9874899708642784632023203132599999985147843112544430
Q 001433 160 FAQKLYQ-TFKNHKRFSKPKLA------RSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLA 232 (1079)
Q Consensus 160 ~~~kl~~-~~~~~~~~~~p~~~------~~~F~i~H~ag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S~~~~i~~lf~~~~ 232 (1079)
|++||+. .+++|+.|.+|+.+ ...|+|+||||+|+|+++||++||+|+++++++.+|++|+++||+.||+...
T Consensus 547 f~~kl~~~~~~~~~~f~~p~~~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~Lf~~~~ 626 (837)
T 1kk8_A 547 FQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPE 626 (837)
T ss_dssp HHHHHHHHHTTTCSSEECCCSCSSTTCCCCSEEEEETTEEEEECCSSHHHHHSCCCCHHHHHHHHTCSSHHHHHHTCC--
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHCCCC
T ss_conf 99999998607896715788644456667834876106764636777877414533499999987464889999835663
Q ss_pred HH-----CCCC--CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHC
Q ss_conf 00-----0488--8886367978999999999853789824562289998998766501166876315513679998407
Q 001433 233 EE-----SSKT--SKFSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAG 305 (1079)
Q Consensus 233 ~~-----~~~~--~k~~tv~~~f~~~l~~Lm~~l~~t~~hfirCikpN~~~~~~~fd~~~v~~Qlr~~gile~~~~~~~g 305 (1079)
.. ..++ ++++||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||+|++||+++|
T Consensus 627 ~~~g~~~~~k~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~G 706 (837)
T 1kk8_A 627 EPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKG 706 (837)
T ss_dssp ----------------CCHHHHHHHHHHHHHHHHTTEEEEEEEEECCCSSCCTTCCCHHHHHHHHTTSSSCC-----CCC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHEEEECCCCCCCHHHHHHHHH
T ss_conf 22477888788888888269999999999999987059731441478865781002612110224156751899999874
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHHHHCCCC--CCEECCCEEEEECCCCCCCHHHHHHHCCHHHHHHH
Q ss_conf 998669588999872321045799-972899999998651988--70005410344034433101112321010368998
Q 001433 306 YPTRKPFDEFVDRFGILASKVLDG-SSDEVTACKRLLEKVGLE--GYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQ 382 (1079)
Q Consensus 306 yp~r~~~~~F~~ry~~l~~~~~~~-~~~~~~~~~~il~~~~~~--~~~iG~tkVFlr~~~~~~Le~~r~~~l~~~a~~IQ 382 (1079)
||+|++|.+|+.||++|+|..++. ..|.+++|+.+|..++++ +|++|+||||||+|+++.||.+|++++..+++.||
T Consensus 707 fp~R~~f~eF~~RY~~L~~~~~~~~~~d~k~~~~~ll~~~~~~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l~~~~~~iQ 786 (837)
T 1kk8_A 707 FPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQ 786 (837)
T ss_dssp SCEEEEHHHHHHHHGGGSGGGCCC---CHHHHHHHHHHHHTCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 00136699999999996323255678888999999999739982005666779996152999999999998876799999
Q ss_pred HHHHHCCCCHHHHHH---HHHHHHHHHHHHHHCCCHHC
Q ss_conf 885310001002311---12356656677630110010
Q 001433 383 RKVRSYLSRKNYIML---RRSAIHIQAACRGQLARTVY 417 (1079)
Q Consensus 383 ~~~R~~l~Rk~y~~~---r~a~i~iQ~~~Rg~lar~~~ 417 (1079)
++||||++|++|.++ +.|++.||++||+|++|+.|
T Consensus 787 a~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~ 824 (837)
T 1kk8_A 787 AHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 824 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 99999999999999999999999999999999997353
No 4
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=1.00 E-value=1 Score=938.05 Aligned_cols=427 Identities=35% Similarity=0.575 Sum_probs=392.8
Q ss_pred CCCHHHHHHHHHHCEEE-----ECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 99978899988333586-----3693688218987899999999999998989999999971059999998313111236
Q 001433 1 MCDAKALEDSLCKREIV-----TRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIY 75 (1079)
Q Consensus 1 ~~~~~~l~~~l~~r~~~-----~~~e~~~~~l~~~~a~~~rd~lak~lY~~LF~wiv~~iN~~l~~~~~~~~~IgvLDi~ 75 (1079)
|||+++|.++||+|++. +++|.+++++++++|..+||||||+||++||+|||++||.+|+.+ ....||||||||
T Consensus 380 gv~~~~L~~aLt~r~~~~~~~~~~~e~i~~~l~~~qA~~~rDaLAK~LY~rLF~wiV~~IN~~l~~~-~~~~~IGILDI~ 458 (1052)
T 4anj_A 380 GLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFE-TSSYFIGVLDIA 458 (1052)
T ss_dssp TCCHHHHHHHHHEEC-------------CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCS-CCSEEEEEEECC
T ss_pred CCCHHHHHHHHHHCEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCEEEEEECC
T ss_conf 9999999998753534311335685289966999999999999999999999999987653156655-665257997147
Q ss_pred CCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCC
Q ss_conf 77556678445766532027887688784544458553102874322454580878997620787234735875059999
Q 001433 76 GFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRS 155 (1079)
Q Consensus 76 GFe~f~~nsfeqlciNyanEklq~~f~~~~f~~e~~ey~~E~i~~~~i~~~dn~~~i~li~~~~~Gil~lLdee~~~p~~ 155 (1079)
|||+|+.|||||||||||||||||+|++|+|+.||+||.+|||+|++|+|.||++|||||+++|.|||++|||||++|++
T Consensus 459 GFE~f~~NsFEQLCINyaNEkLQq~Fn~~vF~~EqeeY~~EgI~w~~I~f~DN~~~idLie~kp~GIl~lLDEe~~~p~~ 538 (1052)
T 4anj_A 459 GFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQP 538 (1052)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHSSSC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCC
T ss_conf 87543547399999988789999999986018899999854877665776893899999872763279998887568988
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCCC----------CCCEEEEECCCCEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 7599999999883299986789889----------987489970864278463202320313259999998514784311
Q 001433 156 THETFAQKLYQTFKNHKRFSKPKLA----------RSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVS 225 (1079)
Q Consensus 156 ~d~~~~~kl~~~~~~~~~~~~p~~~----------~~~F~i~H~ag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S~~~~i~ 225 (1079)
||++|++||++.+++|+.|.+|+.+ ...|+|+||||+|+|+++||++||+|+++++++++|++|+++||+
T Consensus 539 tD~~f~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNrD~l~~~~~~ll~~S~~~~i~ 618 (1052)
T 4anj_A 539 SDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIR 618 (1052)
T ss_dssp CHHHHHHHHHHTTTTCTTEECGGGCSCSTTTTCCTTSEEEEEETTEEEEEECTTHHHHHBCCCCHHHHHHHHTCSCHHHH
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCHHHHCCCCCCHHHHHHHHHCCCHHHH
T ss_conf 57899999998716674546776455554556678897178767852889647726536430139999999958768789
Q ss_pred CCCCCCCHHCC------CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHH
Q ss_conf 25444300004------888886367978999999999853789824562289998998766501166876315513679
Q 001433 226 SLFLPLAEESS------KTSKFSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAI 299 (1079)
Q Consensus 226 ~lf~~~~~~~~------~~~k~~tv~~~f~~~l~~Lm~~l~~t~~hfirCikpN~~~~~~~fd~~~v~~Qlr~~gile~~ 299 (1079)
.||++...... ++.+++||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||+|++
T Consensus 619 ~Lf~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvLE~i 698 (1052)
T 4anj_A 619 ELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVL 698 (1052)
T ss_dssp HTTCC----------------CCBHHHHHHHHHHHHHHHHHTSEEEEEEEECCCSSCCSSCCCHHHHHHHHHHHTHHHHH
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 86120023565556788899876689999999999999970868979998788865788767889999999874579999
Q ss_pred HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC--CCEECCCEEEEECCCCCCCHHHHHHHCCHH
Q ss_conf 998407998669588999872321045799972899999998651988--700054103440344331011123210103
Q 001433 300 RISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGLE--GYQIGKTKVFLRAGQMADLDARRTEVLGRS 377 (1079)
Q Consensus 300 ~~~~~gyp~r~~~~~F~~ry~~l~~~~~~~~~~~~~~~~~il~~~~~~--~~~iG~tkVFlr~~~~~~Le~~r~~~l~~~ 377 (1079)
||+++|||+|++|.+|+.||++|+|..+.. .|++++|+.||..++++ +|++|+||||||+|+++.||.+|..++..+
T Consensus 699 rI~r~Gyp~R~~f~eF~~RY~~L~~~~~~~-~d~k~~~~~iL~~l~l~~~~y~iG~TKVFlr~~~~~~LE~~r~~~~~~~ 777 (1052)
T 4anj_A 699 DLMQGGFPSRASFHELYNMYKKYMPDKLAR-LDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHL 777 (1052)
T ss_dssp HHTTTCCCEEEEHHHHHHHHHTTSCSSGGG-SCHHHHHHHHHHHTSCCGGGEEECSSEEEECTTCHHHHHHHHCCCHHHH
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 998557987071999999999868552468-9999999999997694956699559779657189999999999889999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6899888531000100231112356656677630110010111010124457899999999999996456
Q 001433 378 ASIIQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMCF 447 (1079)
Q Consensus 378 a~~IQ~~~R~~l~Rk~y~~~r~a~i~iQ~~~Rg~lar~~~~~~r~~~AAi~IQ~~~R~~~~rk~y~~~r~ 447 (1079)
+++||+ +|+|++|++|.+++.+++.||..+|++..|+ ++.|.|++.|.++++
T Consensus 778 ~~~iq~-~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~-----------------~~~~~w~~l~~~v~p 829 (1052)
T 4anj_A 778 AELVKR-VNHWLICSRWKKVQWCSLSVIKLKNKIKYRA-----------------EAVSKGEELFTGVVP 829 (1052)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHTTSSCEE
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HCCHHHHHHHHHHHH
T ss_conf 999999-9999999999999999999999999999999-----------------742599999975330
No 5
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=1.00 E-value=1 Score=930.25 Aligned_cols=399 Identities=45% Similarity=0.773 Sum_probs=380.1
Q ss_pred CCCHHHHHHHHHHCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99978899988333586369368821898789999999999999898999999997105999999831311123677556
Q 001433 1 MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESF 80 (1079)
Q Consensus 1 ~~~~~~l~~~l~~r~~~~~~e~~~~~l~~~~a~~~rd~lak~lY~~LF~wiv~~iN~~l~~~~~~~~~IgvLDi~GFe~f 80 (1079)
|||+++|.++||+|++.+++|.+++++++++|..+||||||+||++||+|||.+||.+|+++.....+||||||||||+|
T Consensus 365 gv~~~~L~~aL~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~~~~~~~IGvLDI~GFE~f 444 (795)
T 1w7j_A 365 GVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETF 444 (795)
T ss_dssp TCCHHHHHHHHSEEEEECSSCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCCSEEEEEEECCCCCCC
T ss_pred CCCHHHHHHHHCCCEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
T ss_conf 98999999974256898489403378998999999999999999988999999999861688666605785136765556
Q ss_pred CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHH
Q ss_conf 67844576653202788768878454445855310287432245458087899762078723473587505999975999
Q 001433 81 KTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETF 160 (1079)
Q Consensus 81 ~~nsfeqlciNyanEklq~~f~~~~f~~e~~ey~~E~i~~~~i~~~dn~~~i~li~~~~~Gil~lLdee~~~p~~~d~~~ 160 (1079)
+.|||||||||||||||||+|++|+|+.||+||.+|||+|++|+|.||++|||||+++ .|||++|||||++|++||++|
T Consensus 445 ~~NsFEQlcINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~DN~~~idLie~~-~GIlslLDEec~~p~~tD~~f 523 (795)
T 1w7j_A 445 EINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTW 523 (795)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCCCCHHHHHHHHST-TSHHHHHHHHHTSTTCCHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHC-CCHHHHHHHHCCCCCCCHHHH
T ss_conf 7677999987745689999999888799999888559862124765649999999703-777876322216999874999
Q ss_pred HHHHHHHH-CCCCCCCCCCCCCCCEEEEECCCCEEEECCCCHHHCCHHHHHHHHHHHHHCC-CCCCCCCCCCCCHH----
Q ss_conf 99999883-2999867898899874899708642784632023203132599999985147-84311254443000----
Q 001433 161 AQKLYQTF-KNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASK-CSFVSSLFLPLAEE---- 234 (1079)
Q Consensus 161 ~~kl~~~~-~~~~~~~~p~~~~~~F~i~H~ag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S~-~~~i~~lf~~~~~~---- 234 (1079)
++||++.| ++|++|.+|+.+...|+|+||||+|+|+++||++||+|+++++++.+|++|+ ++||+.||++....
T Consensus 524 ~~kl~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~~v~~lf~~~~~~~~~~ 603 (795)
T 1w7j_A 524 AQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPT 603 (795)
T ss_dssp HHHHHHHHTTTCTTEECCTTCSSEEEEECSSCEEEEECTTHHHHHHCCCCHHHHHHHHTCSSCSHHHHTTC---------
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEEEEECHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC
T ss_conf 99999986245876336877888437774425799803558864035331999999972664379999733443334555
Q ss_pred -----------------------CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
Q ss_conf -----------------------048888863679789999999998537898245622899989987665011668763
Q 001433 235 -----------------------SSKTSKFSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLR 291 (1079)
Q Consensus 235 -----------------------~~~~~k~~tv~~~f~~~l~~Lm~~l~~t~~hfirCikpN~~~~~~~fd~~~v~~Qlr 291 (1079)
..+..+++||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++|||
T Consensus 604 ~~~~s~~~~~s~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr 683 (795)
T 1w7j_A 604 SATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLR 683 (795)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCHHH
T ss_conf 54334455444334455456655455777872899999999999999862798678875788767812217110344553
Q ss_pred CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC--CCCEECCCEEEEECCCCCCCHHH
Q ss_conf 1551367999840799866958899987232104579997289999999865198--87000541034403443310111
Q 001433 292 CGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGL--EGYQIGKTKVFLRAGQMADLDAR 369 (1079)
Q Consensus 292 ~~gile~~~~~~~gyp~r~~~~~F~~ry~~l~~~~~~~~~~~~~~~~~il~~~~~--~~~~iG~tkVFlr~~~~~~Le~~ 369 (1079)
|+||+|++||+++|||+|++|.+|+.||++|+|...... |.+++|+.+|..+++ ++|++|+||||||+|+++.||.+
T Consensus 684 ~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~~~~~~~-d~k~~~~~il~~~~~~~~~~~~G~TKVF~r~~~~~~LE~~ 762 (795)
T 1w7j_A 684 ACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLS-DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKI 762 (795)
T ss_dssp HTTHHHHHHHHHHSCCEEEEHHHHHHHHGGGSCGGGCCS-CHHHHHHHHHHHHCCCGGGEEECSSEEEECTTHHHHHHHH
T ss_pred HCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHHHHCCCCCCEEECCCEEEECHHHHHHHHHH
T ss_conf 177089999997188740339999999998677656777-8789999999982789530577682699743499999999
Q ss_pred HHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 23210103689988853100010023111235
Q 001433 370 RTEVLGRSASIIQRKVRSYLSRKNYIMLRRSA 401 (1079)
Q Consensus 370 r~~~l~~~a~~IQ~~~R~~l~Rk~y~~~r~a~ 401 (1079)
|++++..+++.||+.||||++|++|.++|.++
T Consensus 763 r~~~l~~~~~~iQ~~~Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 763 RADKLRAACIRIQKTIRGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999999999999743
No 6
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=1.00 E-value=1 Score=921.75 Aligned_cols=417 Identities=35% Similarity=0.633 Sum_probs=373.5
Q ss_pred CCCHHHHHHHHHHCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCCC
Q ss_conf 9997889998833358636936882189878999999999999989899999999710599999-983131112367755
Q 001433 1 MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPN-SKSLIGVLDIYGFES 79 (1079)
Q Consensus 1 ~~~~~~l~~~l~~r~~~~~~e~~~~~l~~~~a~~~rd~lak~lY~~LF~wiv~~iN~~l~~~~~-~~~~IgvLDi~GFe~ 79 (1079)
|||+++|.++||+|++.+++|.+++++++++|..+||||||+||++||+|||.+||.+|++... ...|||||||||||+
T Consensus 360 gv~~~~L~~~l~~~~~~~~~e~v~~~~~~~qa~~~rdalak~lY~~LF~wlV~~iN~~l~~~~~~~~~~IgvLDI~GFE~ 439 (995)
T 2ycu_A 360 GLGVTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEALAKATYERLFRWLVLRLNRALDRSPRQGASFLGILDIAGFEI 439 (995)
T ss_dssp TCCHHHHHHHHHSCEEESSSSEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCCSEEEEEEECCCBCC
T ss_pred CCCHHHHHHHHCCCEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC
T ss_conf 98999999973384887388323479999999999999999999999999999999972688777643388733643033
Q ss_pred CCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHHC--CCCCHHHHHHHHHCCCCCC
Q ss_conf 6678445766532027887688784544458553102874322454-580878997620--7872347358750599997
Q 001433 80 FKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEF-VDNQDILDLIEK--KPGGIIALLDEACMFPRST 156 (1079)
Q Consensus 80 f~~nsfeqlciNyanEklq~~f~~~~f~~e~~ey~~E~i~~~~i~~-~dn~~~i~li~~--~~~Gil~lLdee~~~p~~~ 156 (1079)
|+.|||||||||||||||||+|++|+|+.||+||.+|||+|++|+| .||++|||||++ +|.|||++|||||++|++|
T Consensus 440 f~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~p~Gil~lLdee~~~p~~t 519 (995)
T 2ycu_A 440 FQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPKAT 519 (995)
T ss_dssp CSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHHHHHHCCSSSCCHHHHHHHSSSSTTCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
T ss_conf 54340899988766789999998740188889876048874203556675999999826689984655657873699986
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCC--CCCEEEEECCCCEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 599999999883299986789889--987489970864278463202320313259999998514784311254443000
Q 001433 157 HETFAQKLYQTFKNHKRFSKPKLA--RSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEE 234 (1079)
Q Consensus 157 d~~~~~kl~~~~~~~~~~~~p~~~--~~~F~i~H~ag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S~~~~i~~lf~~~~~~ 234 (1079)
|++|++||+..|++|++|.+|+.+ ...|+|+||||+|+|+++||++||+|+++++++.+|++|+++||+.||+.....
T Consensus 520 D~~f~~kl~~~~~~~~~f~~~~~~~~~~~F~i~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~v~~lf~~~~~~ 599 (995)
T 2ycu_A 520 DKSFVEKVAQEQGGHPKFQRPRHLRDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQSTDRLTAEIWKDVEGI 599 (995)
T ss_dssp HHHHHHHHHHHHTTSTTEECCCTTTCCSSEEEEETTEEEEECCTTHHHHHHCCCCHHHHHHHHTCSSHHHHHHTSSCCSS
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCC
T ss_conf 69999999985178877116886678880587778777355511645541564339999999847178999984053333
Q ss_pred ----------------CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHH
Q ss_conf ----------------0488888636797899999999985378982456228999899876650116687631551367
Q 001433 235 ----------------SSKTSKFSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEA 298 (1079)
Q Consensus 235 ----------------~~~~~k~~tv~~~f~~~l~~Lm~~l~~t~~hfirCikpN~~~~~~~fd~~~v~~Qlr~~gile~ 298 (1079)
..++++++||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||+|+
T Consensus 600 ~~~~~~~~~~~~~~g~~~~~~~~~tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~ 679 (995)
T 2ycu_A 600 VGLEQVSSLGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEG 679 (995)
T ss_dssp CSCCC-------------CCCSSCCHHHHHHHHHHHHHHHHHTSEEEEEEEECCCSSCCTTCCCTTTHHHHHHHHTHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHH
T ss_conf 44321235666666667678987744899999999999999825960036356886443266077887888414452887
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHHHHCCCC--CCEECCCEEEEECCCCCCCHHHHHHHCC
Q ss_conf 9998407998669588999872321045799-972899999998651988--7000541034403443310111232101
Q 001433 299 IRISCAGYPTRKPFDEFVDRFGILASKVLDG-SSDEVTACKRLLEKVGLE--GYQIGKTKVFLRAGQMADLDARRTEVLG 375 (1079)
Q Consensus 299 ~~~~~~gyp~r~~~~~F~~ry~~l~~~~~~~-~~~~~~~~~~il~~~~~~--~~~iG~tkVFlr~~~~~~Le~~r~~~l~ 375 (1079)
+||+++|||+|++|.+|+.||++|+|..++. ..|.+++|+.+|..++++ +|++|+||||||+|+++.||.+|++++.
T Consensus 680 iri~r~Gfp~r~~~~~F~~RY~~L~~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~~G~tkVF~r~~~~~~LE~~R~~~l~ 759 (995)
T 2ycu_A 680 IRICRQGFPNRILFQEFRQRYEILTPNAIPKGFMDGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEERASEQT 759 (995)
T ss_dssp HHHHHHSCCEEEEHHHHHHHHGGGSTTTSCSCCCCSCCSCCCSCCCSSEEESSEEEESSCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHEEECCEEEEEECCHHHHHHHHHHHHHH
T ss_conf 98997468753659999999997082525566777799999999975998012264346899822205548999999753
Q ss_pred HHH-----HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHC
Q ss_conf 036-----899888531000100231112356656677630110010
Q 001433 376 RSA-----SIIQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVY 417 (1079)
Q Consensus 376 ~~a-----~~IQ~~~R~~l~Rk~y~~~r~a~i~iQ~~~Rg~lar~~~ 417 (1079)
.+. ..++.++|+..++..+.+.+.++..+|+.+|++.+++..
T Consensus 760 ~~eYe~~a~~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~fr~~ 806 (995)
T 2ycu_A 760 KSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKT 806 (995)
T ss_dssp HHHHHHHHHHHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 44677788899999999999998877765499999999999999887
No 7
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=1.00 E-value=1 Score=907.57 Aligned_cols=420 Identities=39% Similarity=0.670 Sum_probs=380.9
Q ss_pred CCCHHHHHHHHHHCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99978899988333586369368821898789999999999999898999999997105999999831311123677556
Q 001433 1 MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESF 80 (1079)
Q Consensus 1 ~~~~~~l~~~l~~r~~~~~~e~~~~~l~~~~a~~~rd~lak~lY~~LF~wiv~~iN~~l~~~~~~~~~IgvLDi~GFe~f 80 (1079)
|||+++|.++||+|++.+++|.+++++++++|..+||||||+||++||+|||.+||.+|+++. ...|||||||||||+|
T Consensus 383 gv~~~~L~~~l~~~~~~~~~e~v~~~~~~~qa~~~rdalak~lY~~LF~wlV~~IN~~l~~~~-~~~~IgvLDI~GFE~f 461 (1010)
T 1g8x_A 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSER-KAYFIGVLDISGFEIF 461 (1010)
T ss_dssp TSCHHHHHHHHHSCEEESSSSEEECCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSS-CSEEEEEEECCCCCCC
T ss_pred CCCHHHHHHHHHCCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCEEEECCCCCCCCC
T ss_conf 989999999870867784881698489999999999999999999999999999998716787-6754563267653357
Q ss_pred CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHHC-CCCCHHHHHHHHHCCCCCCHH
Q ss_conf 678445766532027887688784544458553102874322454-580878997620-787234735875059999759
Q 001433 81 KTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEF-VDNQDILDLIEK-KPGGIIALLDEACMFPRSTHE 158 (1079)
Q Consensus 81 ~~nsfeqlciNyanEklq~~f~~~~f~~e~~ey~~E~i~~~~i~~-~dn~~~i~li~~-~~~Gil~lLdee~~~p~~~d~ 158 (1079)
+.|||||||||||||||||+|++|+|+.||+||.+|||+|++|+| .||++|||||++ +|.|||++|||||++|++||+
T Consensus 462 ~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~~Gil~lLdee~~~p~~td~ 541 (1010)
T 1g8x_A 462 KVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDN 541 (1010)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCSHHHHHHHHCTTTTCHHHHHHHHTTSSSCCHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCHH
T ss_conf 76759999987535899999998765888888621588865056666769999998367998100001677479999738
Q ss_pred HHHHHHHHHHC-CCCCCCCCCCCCCCEEEEECCCCEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH--HC
Q ss_conf 99999998832-9998678988998748997086427846320232031325999999851478431125444300--00
Q 001433 159 TFAQKLYQTFK-NHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAE--ES 235 (1079)
Q Consensus 159 ~~~~kl~~~~~-~~~~~~~p~~~~~~F~i~H~ag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S~~~~i~~lf~~~~~--~~ 235 (1079)
+|++|+++.++ +|+.|.+|+.+...|+|+||||+|+|+++||++||+|+++++++.+|++|+++||+.||++... ..
T Consensus 542 ~f~~kl~~~~~~~~~~f~~~~~~~~~F~i~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~~~~lf~~~~~~~~~ 621 (1010)
T 1g8x_A 542 TLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621 (1010)
T ss_dssp HHHHHHHHHHTTTCTTEECCTTCSSEEEEEETTEEEEEECTTHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHCHHHHSCC
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECEEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCC
T ss_conf 89999998836789784468888997777640327898336814203564449999999858178999984053533578
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 48888863679789999999998537898245622899989987665011668763155136799984079986695889
Q 001433 236 SKTSKFSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEF 315 (1079)
Q Consensus 236 ~~~~k~~tv~~~f~~~l~~Lm~~l~~t~~hfirCikpN~~~~~~~fd~~~v~~Qlr~~gile~~~~~~~gyp~r~~~~~F 315 (1079)
.++++++||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||+|++||+++|||+|++|.+|
T Consensus 622 ~k~~~~~tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~r~~~~~F 701 (1010)
T 1g8x_A 622 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADF 701 (1010)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHHHHTTSEEEEEEEECSCSSCCTTCCCHHHHHHHHHHSSHHHHHHHHTTSCCEEEEHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHCCHHCCCCCCHHHHHHHHHCCCCCCCHHHH
T ss_conf 77887873699999999999999972597435534687655557757342222505676578887997188602609999
Q ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC--CCEECCCEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHH
Q ss_conf 99872321045799972899999998651988--7000541034403443310111232101036899888531000100
Q 001433 316 VDRFGILASKVLDGSSDEVTACKRLLEKVGLE--GYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKN 393 (1079)
Q Consensus 316 ~~ry~~l~~~~~~~~~~~~~~~~~il~~~~~~--~~~iG~tkVFlr~~~~~~Le~~r~~~l~~~a~~IQ~~~R~~l~Rk~ 393 (1079)
+.||++|+|....+..|.+++|+.+|..++++ +|++|+||||||+|+++.||.+|++++..+++.||-..++
T Consensus 702 ~~RY~~L~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~~G~tkVF~r~~~l~~LE~~R~~~l~~~~~~iQY~~~a------ 775 (1010)
T 1g8x_A 702 VKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRLGSEQTKSDYLKRA------ 775 (1010)
T ss_dssp HHHHGGGSTTCCTTCSCHHHHHHHHHHHTTCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHH------
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH------
T ss_conf 99998747777767788899999999974999410553015544133310688999998999999999999999------
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 23111235665667763011001011101012445789999999
Q 001433 394 YIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYL 437 (1079)
Q Consensus 394 y~~~r~a~i~iQ~~~Rg~lar~~~~~~r~~~AAi~IQ~~~R~~~ 437 (1079)
..++.++|+..++...+. ...+...||+.++.+.
T Consensus 776 --------~~L~~WIr~kqa~l~~r~--~~~sl~~IQ~ll~~f~ 809 (1010)
T 1g8x_A 776 --------NELVQWINDKQASLESRD--FGDSIESVQSFMNAHK 809 (1010)
T ss_dssp --------HHHHHHHHHHHHHHHCCC--CCSSHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHH
T ss_conf --------999999999999987621--1245999999999999
No 8
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=1.00 E-value=1 Score=876.15 Aligned_cols=374 Identities=40% Similarity=0.721 Sum_probs=351.7
Q ss_pred CCCHHHHHHHHHHCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99978899988333586369368821898789999999999999898999999997105999999831311123677556
Q 001433 1 MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESF 80 (1079)
Q Consensus 1 ~~~~~~l~~~l~~r~~~~~~e~~~~~l~~~~a~~~rd~lak~lY~~LF~wiv~~iN~~l~~~~~~~~~IgvLDi~GFe~f 80 (1079)
|||+++|.++||+|++.+++|.+++++++++|..+||||||+||++||+|||.+||.+|++......|||||||||||+|
T Consensus 389 gv~~~~L~~aL~~~~i~~~~e~v~~~~~~~qA~~~rdalAK~lY~rLF~wlV~~IN~~l~~~~~~~~~IGvLDI~GFE~f 468 (783)
T 4db1_A 389 GLNSADLLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLETKQPRQYFIGVLDIAGFEIF 468 (783)
T ss_dssp TCCHHHHHHHHHSCC------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCCSEEEEEEECCCCCCC
T ss_pred CCCHHHHHHHHCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
T ss_conf 99999999864050898588148607999999999999999999999999999998752899888845999436642345
Q ss_pred CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHH
Q ss_conf 678445766532027887688784544458553102874322454-5808789976207872347358750599997599
Q 001433 81 KTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEF-VDNQDILDLIEKKPGGIIALLDEACMFPRSTHET 159 (1079)
Q Consensus 81 ~~nsfeqlciNyanEklq~~f~~~~f~~e~~ey~~E~i~~~~i~~-~dn~~~i~li~~~~~Gil~lLdee~~~p~~~d~~ 159 (1079)
+.|||||||||||||||||+|++|+|+.||+||.+|||+|++|+| .||++|||||++ |.|||++|||||++|++||++
T Consensus 469 ~~NsFEQlCINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~~Dn~~~idLiek-p~Gil~lLDEec~~p~~tD~t 547 (783)
T 4db1_A 469 DFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIEK-PMGIMSILEEECMFPKATDMT 547 (783)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCGGGGGHHHHHHHHS-TTSHHHHHCC-TTCTTCCHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHC-CCCHHHHHHHHHCCCCCCHHH
T ss_conf 6477999998887899999999987677787766407776545656771999999967-873676526876589897799
Q ss_pred HHHHHHHHH-CCCCCCCCCCCC----CCCEEEEECCCCEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 999999883-299986789889----987489970864278463202320313259999998514784311254443000
Q 001433 160 FAQKLYQTF-KNHKRFSKPKLA----RSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEE 234 (1079)
Q Consensus 160 ~~~kl~~~~-~~~~~~~~p~~~----~~~F~i~H~ag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S~~~~i~~lf~~~~~~ 234 (1079)
|++||++.| ++|++|.+|+.+ ...|+|+||||+|+|+++||++||+|+++++++.+|++|+++||+.||++....
T Consensus 548 f~~kl~~~~~~~~~~f~~~~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~lf~~~~~~ 627 (783)
T 4db1_A 548 FKAKLFDNHLGKSANFQKPRNIKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYAGA 627 (783)
T ss_dssp HHHHHHHHHTTTCTTEECCCC----C-CCEEEEETTEEEEECCTTHHHHHHCCCCHHHHHHHHTCSSHHHHHHHHSCC--
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCC
T ss_conf 99999998537897746788777777997388676776678476846545451018899999977658999986412345
Q ss_pred C----------CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 0----------488888636797899999999985378982456228999899876650116687631551367999840
Q 001433 235 S----------SKTSKFSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCA 304 (1079)
Q Consensus 235 ~----------~~~~k~~tv~~~f~~~l~~Lm~~l~~t~~hfirCikpN~~~~~~~fd~~~v~~Qlr~~gile~~~~~~~ 304 (1079)
. .++++++||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||+|++||+++
T Consensus 628 ~~~~~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~ 707 (783)
T 4db1_A 628 DAPIEKGKGKAKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRK 707 (783)
T ss_dssp ----------------CCCHHHHHHHHHHHHHHHHHTSEEEEEEEECCCSSCCTTCCCHHHHHHHHHHSSHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHEECCCCCHHHHEEEHHC
T ss_conf 44445766777768877668999998999999998724977887157876568776465354000100373756020322
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHHHCCCC--CCEECCCEEEEECCCCCCCHHHHHHHCC
Q ss_conf 79986695889998723210457999--72899999998651988--7000541034403443310111232101
Q 001433 305 GYPTRKPFDEFVDRFGILASKVLDGS--SDEVTACKRLLEKVGLE--GYQIGKTKVFLRAGQMADLDARRTEVLG 375 (1079)
Q Consensus 305 gyp~r~~~~~F~~ry~~l~~~~~~~~--~~~~~~~~~il~~~~~~--~~~iG~tkVFlr~~~~~~Le~~r~~~l~ 375 (1079)
|||+|++|.+|+.||++|+|..++.. .|.+++|+.||..++++ +|++|+||||||+|+++.||.+|++++.
T Consensus 708 Gyp~R~~f~eF~~RY~~L~~~~~~~~~~~d~k~~~~~ll~~~~~~~~~~~~G~TKVFlr~g~~~~LE~~R~~~l~ 782 (783)
T 4db1_A 708 GFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERLS 782 (783)
T ss_dssp SCCEEEEC--------------------------CCHHHHSSSSCGGGEEECSSEEEECTTHHHHHHHHC-----
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHC
T ss_conf 788657089999999975944367777779999999999967989570998788999775899999999999854
No 9
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=1.00 E-value=1 Score=873.48 Aligned_cols=386 Identities=38% Similarity=0.634 Sum_probs=355.8
Q ss_pred CCCHHHHHHHHHHCEEE-----ECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 99978899988333586-----3693688218987899999999999998989999999971059999998313111236
Q 001433 1 MCDAKALEDSLCKREIV-----TRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIY 75 (1079)
Q Consensus 1 ~~~~~~l~~~l~~r~~~-----~~~e~~~~~l~~~~a~~~rd~lak~lY~~LF~wiv~~iN~~l~~~~~~~~~IgvLDi~ 75 (1079)
|||+++|.++||+|++. ++|+.+++++++++|..+||||||+||++||+|||.+||.+|..+ ....+|||||||
T Consensus 376 gv~~~~L~~aL~~r~~~t~~g~~~ge~i~~~l~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~-~~~~~IGvLDI~ 454 (784)
T 2v26_A 376 GLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFE-TSSYFIGVLDIA 454 (784)
T ss_dssp TCCHHHHHHHHHEEEC-----------CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCS-CCSEEEEEEECC
T ss_pred CCCHHHHHHHHHHCEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCEEEECCCC
T ss_conf 9899999999742188533457788768615999999999999999999999999999999761756-666444410267
Q ss_pred CCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCC
Q ss_conf 77556678445766532027887688784544458553102874322454580878997620787234735875059999
Q 001433 76 GFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRS 155 (1079)
Q Consensus 76 GFe~f~~nsfeqlciNyanEklq~~f~~~~f~~e~~ey~~E~i~~~~i~~~dn~~~i~li~~~~~Gil~lLdee~~~p~~ 155 (1079)
|||+|+.|||||||||||||||||+|++|+|+.||+||.+|||+|++|+|.||++|||||+++|.|||++|||||++|++
T Consensus 455 GFE~f~~NsFEQlcINyaNEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~DN~~~idLie~kp~GIlslLDEe~~~p~~ 534 (784)
T 2v26_A 455 GFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQP 534 (784)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHSSSC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC
T ss_conf 76667767899997877778999999974556678888860887432456570999999861156387889998468998
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCCC----------CCCEEEEECCCCEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 7599999999883299986789889----------987489970864278463202320313259999998514784311
Q 001433 156 THETFAQKLYQTFKNHKRFSKPKLA----------RSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVS 225 (1079)
Q Consensus 156 ~d~~~~~kl~~~~~~~~~~~~p~~~----------~~~F~i~H~ag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S~~~~i~ 225 (1079)
||++|++||++.+++|++|.+|+.+ ...|+|+||||+|+|+++||++||+|+++++++.+|++|+++||+
T Consensus 535 tD~~f~~kl~~~~~~~~~~~~p~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~l~ 614 (784)
T 2v26_A 535 SDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIR 614 (784)
T ss_dssp CHHHHHHHHHHHTTTCTTEECGGGCSSGGGTTSCTTSEEEEEETTEEEEEECTTHHHHTBCCCCHHHHHHHHTCSCHHHH
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCHHHHCCCHHHHHHHHHHHHCHHHHHH
T ss_conf 75899999999727885503578765443433467785376614720766214778752523339999999846024799
Q ss_pred CCCCCCCHHCC------CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHH
Q ss_conf 25444300004------888886367978999999999853789824562289998998766501166876315513679
Q 001433 226 SLFLPLAEESS------KTSKFSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAI 299 (1079)
Q Consensus 226 ~lf~~~~~~~~------~~~k~~tv~~~f~~~l~~Lm~~l~~t~~hfirCikpN~~~~~~~fd~~~v~~Qlr~~gile~~ 299 (1079)
.||+....... ++.+++||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||+|++
T Consensus 615 ~Lf~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~i 694 (784)
T 2v26_A 615 ELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVL 694 (784)
T ss_dssp HHC----------------CCCCBHHHHHHHHHHHHHHHHHTSEEEEEEEECCCSSCCSSCCCHHHHHHHHHHTTHHHHH
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 97043123566766677777556389999999999999987059745898667862235864532534026636537999
Q ss_pred HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC--CCEECCCEEEEECCCCCCCHHHHHHHCCHH
Q ss_conf 998407998669588999872321045799972899999998651988--700054103440344331011123210103
Q 001433 300 RISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGLE--GYQIGKTKVFLRAGQMADLDARRTEVLGRS 377 (1079)
Q Consensus 300 ~~~~~gyp~r~~~~~F~~ry~~l~~~~~~~~~~~~~~~~~il~~~~~~--~~~iG~tkVFlr~~~~~~Le~~r~~~l~~~ 377 (1079)
||+++|||+|++|.+|+.||++|+|..+. ..|.+++|+.+|..++++ +|++|+||||||+|+++.||+++.....+.
T Consensus 695 ri~r~Gyp~R~~f~eF~~RY~~L~~~~~~-~~d~~~~~~~ll~~~~~~~~~~~~G~TKVF~r~g~~~~le~~~~~~~~~~ 773 (784)
T 2v26_A 695 DLMQGGFPSRASFHELYNMYKKYMPDKLA-RLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHL 773 (784)
T ss_dssp HHHTSCCSEEEEHHHHHHHHGGGCCHHHH-TSCHHHHHHHHHHHTTCCGGGEEECSSEEEECTTCHHHHHHHHCCCHHHH
T ss_pred HHHHHCCCCCCCHHHHHHHHHHCCCCCCC-CCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHCHHHH
T ss_conf 99985188554299999998523886567-78989999999997597957578379308874888999999975289999
Q ss_pred HHHHHHHHHHCC
Q ss_conf 689988853100
Q 001433 378 ASIIQRKVRSYL 389 (1079)
Q Consensus 378 a~~IQ~~~R~~l 389 (1079)
+. |++.+|+|+
T Consensus 774 ~~-ii~~v~~wl 784 (784)
T 2v26_A 774 AE-LVKRVNHWL 784 (784)
T ss_dssp HH-HHHHHHHHC
T ss_pred HH-HHHHHHHHC
T ss_conf 99-999998449
No 10
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=1.00 E-value=1 Score=869.15 Aligned_cols=377 Identities=42% Similarity=0.745 Sum_probs=353.6
Q ss_pred CCCHHHHHHHHHHCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99978899988333586369368821898789999999999999898999999997105999999831311123677556
Q 001433 1 MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESF 80 (1079)
Q Consensus 1 ~~~~~~l~~~l~~r~~~~~~e~~~~~l~~~~a~~~rd~lak~lY~~LF~wiv~~iN~~l~~~~~~~~~IgvLDi~GFe~f 80 (1079)
|||+++|.++||+|++.+++|.+++++++++|..+||||||+||++||+|||.+||.+|++... ..+||||||||||+|
T Consensus 383 gv~~~~L~~aL~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~~~-~~~IGvLDI~GFE~F 461 (770)
T 1w9i_A 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERK-AYFIGVLDIYGFEIF 461 (770)
T ss_dssp TCCHHHHHHHHHSCEEEETTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCC-SEEEEEEECCCCCCC
T ss_pred CCCHHHHHHHHHCCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCEEEECCCCCCCCC
T ss_conf 9899999998607678838806985889999999999999999999999999999987158877-775663057653445
Q ss_pred CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHHCC-CCCHHHHHHHHHCCCCCCHH
Q ss_conf 678445766532027887688784544458553102874322454-5808789976207-87234735875059999759
Q 001433 81 KTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEF-VDNQDILDLIEKK-PGGIIALLDEACMFPRSTHE 158 (1079)
Q Consensus 81 ~~nsfeqlciNyanEklq~~f~~~~f~~e~~ey~~E~i~~~~i~~-~dn~~~i~li~~~-~~Gil~lLdee~~~p~~~d~ 158 (1079)
+.|||||||||||||||||+|++|+|+.||+||.+|||+|++|+| .||++|||||+++ |.|||++|||||++|++||+
T Consensus 462 ~~NsFEQlCINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek~~p~GilslLDEec~~p~~tD~ 541 (770)
T 1w9i_A 462 KVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDN 541 (770)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGGGHHHHHHHHCTTTTCHHHHHHHHHSSSSCCHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHH
T ss_conf 64789999987637899999986402778887621587730302356728999997278987022433666079998768
Q ss_pred HHHHHHHHH-HCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHH--C
Q ss_conf 999999988-3299986789889987489970864278463202320313259999998514784311254443000--0
Q 001433 159 TFAQKLYQT-FKNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEE--S 235 (1079)
Q Consensus 159 ~~~~kl~~~-~~~~~~~~~p~~~~~~F~i~H~ag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S~~~~i~~lf~~~~~~--~ 235 (1079)
+|++||+.. +++|+.|.+|+.+...|+|+||||+|+|+++||++||+|+++++++.+|++|+++||+.||++.... .
T Consensus 542 ~f~~kL~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~Lf~~~~~~~~~ 621 (770)
T 1w9i_A 542 TLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621 (770)
T ss_dssp HHHHHHHHHHTTTSTTEECCSSCSSEEEEEETTEEEEEECTTHHHHHHCCCCHHHHHHHHTCSSTTHHHHHHCHHHHCCC
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCC
T ss_conf 99999999855789784578888885575314765324236834442572309999999856478999984055788877
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 48888863679789999999998537898245622899989987665011668763155136799984079986695889
Q 001433 236 SKTSKFSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEF 315 (1079)
Q Consensus 236 ~~~~k~~tv~~~f~~~l~~Lm~~l~~t~~hfirCikpN~~~~~~~fd~~~v~~Qlr~~gile~~~~~~~gyp~r~~~~~F 315 (1079)
.++++++||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||+|++||+++|||+|++|.+|
T Consensus 622 ~k~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF 701 (770)
T 1w9i_A 622 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADF 701 (770)
T ss_dssp EETTEECCHHHHHHHHHHHHHHHHHTSEEEEEEEECSCSSCCSSCCCHHHHHHHHHHSSHHHHHHHTTSSCCEEEESCC-
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHH
T ss_conf 77787762369899999999999971496446645688644347617441086745632699999998568633529999
Q ss_pred HHHHHHHHCCCCC-CCCCHHHHHHHHHHHCCCC--CCEECCCEEEEECCCCCCCHHHHHHHCCHHHH
Q ss_conf 9987232104579-9972899999998651988--70005410344034433101112321010368
Q 001433 316 VDRFGILASKVLD-GSSDEVTACKRLLEKVGLE--GYQIGKTKVFLRAGQMADLDARRTEVLGRSAS 379 (1079)
Q Consensus 316 ~~ry~~l~~~~~~-~~~~~~~~~~~il~~~~~~--~~~iG~tkVFlr~~~~~~Le~~r~~~l~~~a~ 379 (1079)
+.||++|+| .++ +..|.+++|+.||..++++ +|++|+||||||+|+++.||.+|++++..+++
T Consensus 702 ~~RY~~L~~-~~~~~~~d~k~~~~~lL~~~~~~~~~~~~G~TKVF~r~~~l~~LE~~R~~~l~~~~~ 767 (770)
T 1w9i_A 702 VKRYYLLAP-NVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEARELRGDYKDD 767 (770)
T ss_dssp -----------------------------------CCCCCSSEEEECTTTTTC--------------
T ss_pred HHHHHHHCC-CCCCCCCCHHHHHHHHHHHCCCCCCCEEECCEEEEECCCHHHHHHHHHHHHHHHHHC
T ss_conf 999998561-234678898999999999639994527767811896105999999999999998743
Done!