Query 001436
Match_columns 1078
No_of_seqs 582 out of 4701
Neff 6.3
Searched_HMMs 29240
Date Tue Mar 26 17:04:11 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001436.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_736-740//hhsearch_pdb/001436hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 1.0 1 1 286.2 29.8 294 526-851 18-320 (437)
2 1n11_A Ankyrin; clathrin, BAND 1.0 1 1 282.2 30.6 294 526-851 84-386 (437)
3 4g8k_A 2-5A-dependent ribonucl 1.0 1 1 259.2 30.1 279 525-830 28-330 (337)
4 3utm_A Tankyrase-1; tankyrase, 1.0 1 1 254.7 27.2 280 525-826 27-334 (351)
5 2fo1_E LIN-12 protein; beta-ba 1.0 1 1 248.2 20.0 248 526-792 98-371 (373)
6 1wdy_A 2-5A-dependent ribonucl 1.0 1 1 247.2 28.2 252 525-793 8-279 (285)
7 3ljn_A Hypothetical protein; a 1.0 1 1 243.0 16.6 222 523-793 21-270 (364)
8 4g8k_A 2-5A-dependent ribonucl 1.0 1 1 241.3 27.7 246 526-794 63-328 (337)
9 3ljn_A Hypothetical protein; a 1.0 1 1 240.1 11.7 226 550-827 13-270 (364)
10 1oy3_D Transcription factor in 1.0 1 1 239.5 17.6 252 524-816 11-269 (282)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=286.22 Aligned_cols=294 Identities=14% Similarity=0.137 Sum_probs=179.6
Q ss_pred CHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH---
Q ss_conf 20656239923799999879976678999999813789995799642011212002889997555788998127779---
Q 001436 526 CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL--- 602 (1078)
Q Consensus 526 ~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl--- 602 (1078)
+++||..|+++++..|++.|++ .+..+..|.||||+||..|+ .++++ +++..+++++..+..| .|+||+
T Consensus 18 L~~Aa~~g~~~~v~~Ll~~g~~--~~~~~~~~~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~A~~ 89 (437)
T 1n11_A 18 LHVASFMGHLPIVKNLLQRGAS--PNVSNVKVETPLHMAARAGH--TEVAK--YLLQNKAKVNAKAKDD--QTPLHCAAR 89 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC--SCCSSSCCCCHHHHHHHHTC--HHHHH--HHHHHTCCSSCCCTTS--CCHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHHHH
T ss_conf 9999987899999999986999--99888899879999998197--99999--9995899999879999--989999998
Q ss_pred --HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH
Q ss_conf --899999998199998677647131999999961511678998875129988767453101599999997197999999
Q 001436 603 --HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRK 680 (1078)
Q Consensus 603 --~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~ 680 (1078)
+.+++++|+..++..+..+..|.+++|+|+..++. +.+..|++.+.+.+..+..+ .++++.++. .+...++++
T Consensus 90 ~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~--~~v~~Ll~~~~~~~~~~~~g--~t~L~~A~~-~g~~~~v~~ 164 (437)
T 1n11_A 90 IGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV--ETVLALLEKEASQACMTKKG--FTPLHVAAK-YGKVRVAEL 164 (437)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCH--HHHHHHHHTTCCSCCCCTTS--CCHHHHHHH-TTCHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCCC--CCHHHHHHH-CCCHHHHHH
T ss_conf 7989999999967999887799998599999985999--99999996799876779999--879999997-698999999
Q ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 99689999855899993989999829988899999679996313899950889999829999999999759999988899
Q 001436 681 VCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDP 760 (1078)
Q Consensus 681 Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp 760 (1078)
|++.|++++..+..|.||||+|+..|+.+++++|+..|++++..+..|+||||+|+..|+.+++++|+..|++++.
T Consensus 165 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~---- 240 (437)
T 1n11_A 165 LLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA---- 240 (437)
T ss_dssp HHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC----
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC----
T ss_conf 9967999877789998889999981999999999847999887677899889999986989999999976999888----
Q ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf 99999999989999966949999999982797433357558899999468759----99999999814799999997310
Q 001436 761 SPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDESDV 836 (1078)
Q Consensus 761 ~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~----~~~v~~Lle~~a~~~~~~~~e~~ 836 (1078)
++..|.||||+|+..|+.+++++|++.+++ ++..+..|.||++.+. .++++.|++.+++++..+
T Consensus 241 --~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~----- 308 (437)
T 1n11_A 241 --ESVQGVTPLHLAAQEGHAEMVALLLSKQAN-----GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATT----- 308 (437)
T ss_dssp --CCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC-----
T ss_pred --CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC-----
T ss_conf --798999799999977889999999966999-----99879999979999998499999999984875678879-----
Q ss_pred HCCCCHHHHHHHHHH
Q ss_conf 000001889998787
Q 001436 837 LSLKDSLTAICNATQ 851 (1078)
Q Consensus 837 lslkdsltAlr~Aaq 851 (1078)
..+.|+++.|+.
T Consensus 309 ---~~g~t~L~~A~~ 320 (437)
T 1n11_A 309 ---RMGYTPLHVASH 320 (437)
T ss_dssp ---SSCCCHHHHHHH
T ss_pred ---CCCCCHHHHHHH
T ss_conf ---999889999998
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=282.23 Aligned_cols=294 Identities=16% Similarity=0.146 Sum_probs=185.3
Q ss_pred CHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH---
Q ss_conf 20656239923799999879976678999999813789995799642011212002889997555788998127779---
Q 001436 526 CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL--- 602 (1078)
Q Consensus 526 ~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl--- 602 (1078)
+++||..|+.+++..|++.|++ ....+..|.||||+|+.+++ .+++. +++..+++++..+..| .|++|+
T Consensus 84 L~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~g~t~L~~A~~~g~--~~~v~--~Ll~~~~~~~~~~~~g--~t~L~~A~~ 155 (437)
T 1n11_A 84 LHCAARIGHTNMVKLLLENNAN--PNLATTAGHTPLHIAAREGH--VETVL--ALLEKEASQACMTKKG--FTPLHVAAK 155 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC--TTCCCTTCCCHHHHHHHHTC--HHHHH--HHHHTTCCSCCCCTTS--CCHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHHHH
T ss_conf 9999987989999999967999--88779999859999998599--99999--9996799876779999--879999997
Q ss_pred --HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH
Q ss_conf --899999998199998677647131999999961511678998875129988767453101599999997197999999
Q 001436 603 --HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRK 680 (1078)
Q Consensus 603 --~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~ 680 (1078)
+.+++++|+..+...+..+..|.+++|.|+..++ .+.++.|++.+.+.+..+..+ .++++.++. .+...+++.
T Consensus 156 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~-~~~~~~~~~ 230 (437)
T 1n11_A 156 YGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNN--LDIVKLLLPRGGSPHSPAWNG--YTPLHIAAK-QNQVEVARS 230 (437)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTC--HHHHHHHGGGTCCSCCCCTTC--CCHHHHHHH-TTCHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC--HHHHHHHHHCCCCCCCCCCCC--CCHHHHHHH-CCCHHHHHH
T ss_conf 698999999996799987778999888999998199--999999984799988767789--988999998-698999999
Q ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 99689999855899993989999829988899999679996313899950889999829999999999759999988899
Q 001436 681 VCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDP 760 (1078)
Q Consensus 681 Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp 760 (1078)
|++.|++++..+..|.||||+|+..|+.+++++|+..|++++..|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 231 Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~--- 307 (437)
T 1n11_A 231 LLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDAT--- 307 (437)
T ss_dssp HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCC---
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC---
T ss_conf 99769998887989997999999778899999999669999987999997999999849999999998487567887---
Q ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf 99999999989999966949999999982797433357558899999468759----99999999814799999997310
Q 001436 761 SPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDESDV 836 (1078)
Q Consensus 761 ~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~----~~~v~~Lle~~a~~~~~~~~e~~ 836 (1078)
+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||++++. .++++.|++.|++++..+
T Consensus 308 ---~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-----~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~----- 374 (437)
T 1n11_A 308 ---TRMGYTPLHVASHYGNIKLVKFLLQHQAD-----VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVS----- 374 (437)
T ss_dssp ---CSSCCCHHHHHHHSSCSHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC-----
T ss_pred ---CCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCC-----
T ss_conf ---99998899999986949999999966999-----99889999889999998781999999997768998878-----
Q ss_pred HCCCCHHHHHHHHHH
Q ss_conf 000001889998787
Q 001436 837 LSLKDSLTAICNATQ 851 (1078)
Q Consensus 837 lslkdsltAlr~Aaq 851 (1078)
+++.||++.|+.
T Consensus 375 ---~~g~t~l~~A~~ 386 (437)
T 1n11_A 375 ---SDGTTPLAIAKR 386 (437)
T ss_dssp ---SSSCCHHHHHHH
T ss_pred ---CCCCCHHHHHHH
T ss_conf ---998989999988
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=1.00 E-value=1 Score=259.25 Aligned_cols=279 Identities=13% Similarity=0.022 Sum_probs=234.2
Q ss_pred CCHHHHHCCCCHHHHHHHHCCCCCCCCCCC-CCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH-
Q ss_conf 320656239923799999879976678999-999813789995799642011212002889997555788998127779-
Q 001436 525 KCKWSCMFAEVEVPAEVLADGVLCCRIPPH-AVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL- 602 (1078)
Q Consensus 525 ~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~-~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl- 602 (1078)
.+..||..|++++++.||+.|++ ++..+ ..|+||||+||..|+ .++++ +|+..+++++..+..+ .++++.
T Consensus 28 ~L~~Av~~g~~~~V~~LL~~Gad--vn~~~~~~g~TpLh~A~~~g~--~~iv~--~Ll~~ga~~~~~~~~~--~~~~~~~ 99 (337)
T 4g8k_A 28 LLIKAVQNEDVDLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSR--EDIVE--LLLRHGADPVLRKKNG--ATPFILA 99 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCC--TTCCCTTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCHHHHCCCC--CCHHHHH
T ss_conf 99999984899999999987999--783489899699999998498--99999--9987599533321578--8646777
Q ss_pred ----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC--------CCCHHHHHHHH
Q ss_conf ----899999998199998677647131999999961511678998875129988767453--------10159999999
Q 001436 603 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHV--------EKYQILQKIMK 670 (1078)
Q Consensus 603 ----~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~--------~~~t~L~~aa~ 670 (1078)
...+...++..+...+..+..|.++++.++..+. .+.+..+++.+++++...... ...++|+.++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~--~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~ 177 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK--VKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 177 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTC--HHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHH
T ss_pred HHCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCC--HHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 75054135677631020055530379987999987186--9999999975998343330132200036789769999998
Q ss_pred HCCHHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCCC----HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHH
Q ss_conf 7197999999996-899998558999939899998299----88899999679996313899950889999829999999
Q 001436 671 EKLYSWLLRKVCE-DGKGPCILDDEGQGVLHLAASLGY----DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVA 745 (1078)
Q Consensus 671 ~~~~~~lv~~Lle-~Gadin~~d~~G~TpLHlAa~~G~----~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~ 745 (1078)
. ++..++++|++ .|++++.+|..|.|+||.++..+. ..++++|+++|+++|.+|..|+||||+|+..|+.++++
T Consensus 178 ~-g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~ 256 (337)
T 4g8k_A 178 K-GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQ 256 (337)
T ss_dssp H-TCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHH
T ss_pred C-CCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 7-789999999863498967657889727899999737566899999999779998876899998789999851258999
Q ss_pred HHHHC-CCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHH
Q ss_conf 99975-999998889999999999989999966949999999982797433357558899999468759----9999999
Q 001436 746 VLLSL-GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTV 820 (1078)
Q Consensus 746 ~LL~~-GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~----~~~v~~L 820 (1078)
.|+.. |++++. +|..|.||||+|+..|+.+++++|+++|++ ++.+ +|++.+. .++++.|
T Consensus 257 ~Ll~~~~~~vn~------~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd-----~n~~-----~~L~~A~~~~~~~iv~~L 320 (337)
T 4g8k_A 257 RLLEQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRGAS-----TDCG-----DLVMTARRNYDHSLVKVL 320 (337)
T ss_dssp HHHTSTTCCTTC------BCTTSCBHHHHHHHTTCHHHHHHHHTTSCS-----STTC-----CHHHHHHHTTCHHHHHHH
T ss_pred HHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCC-----CHHHHHHHCCCHHHHHHH
T ss_conf 998734875667------689999999999986879999999987899-----9987-----899999986999999999
Q ss_pred HHCCCCCCCC
Q ss_conf 9814799999
Q 001436 821 SEKTATPAND 830 (1078)
Q Consensus 821 le~~a~~~~~ 830 (1078)
+++||+++..
T Consensus 321 l~~GA~~d~~ 330 (337)
T 4g8k_A 321 LSHGAKEDFH 330 (337)
T ss_dssp HHTTCCC---
T ss_pred HHCCCCCCCC
T ss_conf 9876998989
No 4
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=1.00 E-value=1 Score=254.69 Aligned_cols=280 Identities=15% Similarity=0.036 Sum_probs=228.7
Q ss_pred CCHHHHHCCCCHHHHHHHHC-CCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH-
Q ss_conf 32065623992379999987-9976678999999813789995799642011212002889997555788998127779-
Q 001436 525 KCKWSCMFAEVEVPAEVLAD-GVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL- 602 (1078)
Q Consensus 525 ~~~~Ac~fG~veVv~~LLq~-Gv~rC~~p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl- 602 (1078)
.+.+||..|+.+.+..++.. +++ ....+..|.||||+|+..|+ .++++ +++..+++++..+..| .||||+
T Consensus 27 ~L~~A~~~g~~~~v~~ll~~~~~~--~~~~d~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~A 98 (351)
T 3utm_A 27 ELLEAARSGNEEKLMALLTPLNVN--CHASDGRKSTPLHLAAGYNR--VRIVQ--LLLQHGADVHAKDKGG--LVPLHNA 98 (351)
T ss_dssp HHHHHHHHTCHHHHHHHCCTTTTT--CCCSSTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHH
T ss_conf 599999839989999999864888--65579999889999998599--99999--9997699997617999--8089999
Q ss_pred ----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCC------------------
Q ss_conf ----8999999981999986776471319999999615116789988751299887674531------------------
Q 001436 603 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVE------------------ 660 (1078)
Q Consensus 603 ----~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~------------------ 660 (1078)
+.+++++|+..+...+..+..|.+++|+|+..++ .+.++.|++.+++.+..+..+.
T Consensus 99 ~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 176 (351)
T 3utm_A 99 CSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNR--VEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYE 176 (351)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC--HHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC--HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 97788999999997799999778889989999997499--9999999976999863367898623777533258999864
Q ss_pred -CCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC---CHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf -0159999999719799999999689999855899993989999829---988899999679996313899950889999
Q 001436 661 -KYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLG---YDWAIKPTVTAGVSINFRDLSGWTALHWAA 736 (1078)
Q Consensus 661 -~~t~L~~aa~~~~~~~lv~~Lle~Gadin~~d~~G~TpLHlAa~~G---~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa 736 (1078)
.+..+..++...... .+..++..+......+..|.||||+|+..+ ...++++|+..|++++.+|..|+||||+|+
T Consensus 177 ~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 255 (351)
T 3utm_A 177 FKGHSLLQAAREADLA-KVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAA 255 (351)
T ss_dssp HHHHHHHHHHHTTCHH-HHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred HCCCHHHHHHHHCCHH-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf 0421799999832499-999999700013357888998899999971755899999999759996776999998999999
Q ss_pred HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 82999999999975999998889999999999989999966949999999982797433357558899999468759999
Q 001436 737 YCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKA 816 (1078)
Q Consensus 737 ~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~~~~ 816 (1078)
..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|++.|++ ++.++..|.||++++...+
T Consensus 256 ~~g~~~~v~~Ll~~ga~~n~------~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad-----~~~~~~~g~tal~~a~~~~ 324 (351)
T 3utm_A 256 ERAHNDVMEVLHKHGAKMNA------LDSLGQTALHRAALAGHLQTCRLLLSYGSD-----PSIISLQGFTAAQMGNEAV 324 (351)
T ss_dssp HTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHSCHHH
T ss_pred HCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHHH
T ss_conf 85989899999987999877------599999889999982859999999984999-----8886889988365636999
Q ss_pred HHHHHHCCCC
Q ss_conf 9999981479
Q 001436 817 VQTVSEKTAT 826 (1078)
Q Consensus 817 v~~Lle~~a~ 826 (1078)
++.|.+....
T Consensus 325 ~~~l~~~~~~ 334 (351)
T 3utm_A 325 QQILSESTPM 334 (351)
T ss_dssp HHHHHHC---
T ss_pred HHHHHHCCCC
T ss_conf 9998760622
No 5
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=248.21 Aligned_cols=248 Identities=16% Similarity=0.085 Sum_probs=158.9
Q ss_pred CHHHHHCCCCHHHHHHHHCCCCCCCCCCC-CCCCCHHHHHHHCCCCCCCHHHHHH------CCCCCCCCCCCCCCCCCCC
Q ss_conf 20656239923799999879976678999-9998137899957996420112120------0288999755578899812
Q 001436 526 CKWSCMFAEVEVPAEVLADGVLCCRIPPH-AVGRVPFYITCSNRLACSEVREFDY------IVGSVKDADISDIYGSSTS 598 (1078)
Q Consensus 526 ~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~-~~G~tPLhvAa~ng~~cseVv~fey------l~~~~adin~~d~~g~~~t 598 (1078)
+++||. |+.+++..|+... .+..+ ..|+||||+||.+|+ .+++++++ ++..+++++..+..| .|
T Consensus 98 L~~Aa~-~~~~~~~~L~~~~----~n~~d~~~g~t~Lh~Aa~~g~--~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g--~T 168 (373)
T 2fo1_E 98 LHTEAA-GSYAITEPITRES----VNIIDPRHNRTVLHWIASNSS--AEKSEDLIVHEAKECIAAGADVNAMDCDE--NT 168 (373)
T ss_dssp HHHHHH-SSSCCCSCCSTTT----TTTCCCSSCCCHHHHHHCTTC--CSCCTTHHHHHHHHHHHTCCCTTCCCTTS--CC
T ss_pred HHHHHC-CCCHHHHHHCCCC----CCCCCCCCCCCHHHHHHHCCC--HHHHHHHHHHHHHHHHHCCCCCCCCCCCC--CC
T ss_conf 999863-8716888750023----433577679888999987798--77899999999999986599876778999--89
Q ss_pred HHHH-----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHC---CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 7779-----89999999819999867764713199999996151167899887512---998876745310159999999
Q 001436 599 ESFL-----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEA---NPEKNLSQHVEKYQILQKIMK 670 (1078)
Q Consensus 599 ~Lhl-----~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~---ad~n~~s~~~~~~t~L~~aa~ 670 (1078)
+||+ +.+++++|+..|+..+..+..|.+++|+|+..++ .+.+++|++.+ .+.+..+..+ .++++.++.
T Consensus 169 pL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~--~~~v~~Ll~~~~~~~~~~~~d~~g--~t~L~~A~~ 244 (373)
T 2fo1_E 169 PLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRD--FGMMVYMLNSTKLKGDIEELDRNG--MTALMIVAH 244 (373)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTC--HHHHHHHTTSHHHHHTTSCCCTTS--CCHHHHHHH
T ss_pred HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC--HHHHHHHHHCCCCCCCHHHCCCCC--CCHHHHHHH
T ss_conf 8999998694999999997799976158989879999987799--889999984576556732237789--979999998
Q ss_pred HCC--HHHHHHHHHHCCCCCCC--------CCCCCCCHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHCC
Q ss_conf 719--79999999968999985--------5899993989999829988899999679-996313899950889999829
Q 001436 671 EKL--YSWLLRKVCEDGKGPCI--------LDDEGQGVLHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYCG 739 (1078)
Q Consensus 671 ~~~--~~~lv~~Lle~Gadin~--------~d~~G~TpLHlAa~~G~~~iv~~LL~~G-adin~~D~~G~TpLH~Aa~~G 739 (1078)
.++ ...++++|++.|++++. .+..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|
T Consensus 245 ~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g 324 (373)
T 2fo1_E 245 NEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEG 324 (373)
T ss_dssp SCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHT
T ss_pred HCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 37834499999999779976555544457555458889999998099999999997368986676989998999999868
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf 99999999975999998889999999999989999966949999999982797
Q 001436 740 REKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT 792 (1078)
Q Consensus 740 ~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~ 792 (1078)
+.++|++|+++|++++.. |..|.||||+|+.+|+.+++++|++.++.
T Consensus 325 ~~~iv~~Ll~~gad~~~~------d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 325 RIEVVMYLIQQGASVEAV------DATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp CHHHHHHHHHTTCCSSCC------CSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred CHHHHHHHHHCCCCCCCC------CCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf 999999999769985477------98999999999985988899998733734
No 6
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=247.20 Aligned_cols=252 Identities=13% Similarity=0.042 Sum_probs=203.8
Q ss_pred CCHHHHHCCCCHHHHHHHHCCCCCCCCCC-CCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH-
Q ss_conf 32065623992379999987997667899-9999813789995799642011212002889997555788998127779-
Q 001436 525 KCKWSCMFAEVEVPAEVLADGVLCCRIPP-HAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL- 602 (1078)
Q Consensus 525 ~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~-~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl- 602 (1078)
.+.+||..|+++++..|++.|++ .... +..|.||||+|+..++ .++++ +++..+++++..+..| .|++|+
T Consensus 8 ~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~A 79 (285)
T 1wdy_A 8 LLIKAVQNEDVDLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSR--EDIVE--LLLRHGADPVLRKKNG--ATPFLLA 79 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHH
T ss_conf 99999971899999999986998--432038999869999997697--99999--9997699975458789--9899999
Q ss_pred ----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC--------CCCCCHHHHHHHH
Q ss_conf ----8999999981999986776471319999999615116789988751299887674--------5310159999999
Q 001436 603 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQ--------HVEKYQILQKIMK 670 (1078)
Q Consensus 603 ----~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~--------~~~~~t~L~~aa~ 670 (1078)
+.+++++|+..+...+..+..|.++++.++..++ .+.+++|++.+++.+.... +....++++.++.
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~--~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 157 (285)
T 1wdy_A 80 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK--VKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTC--HHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred HHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC--HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHH
T ss_conf 97499999999997599987658456889999999098--8999999984899441104478888660279869999998
Q ss_pred HCCHHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCC----HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHH
Q ss_conf 71979999999968-99998558999939899998299----88899999679996313899950889999829999999
Q 001436 671 EKLYSWLLRKVCED-GKGPCILDDEGQGVLHLAASLGY----DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVA 745 (1078)
Q Consensus 671 ~~~~~~lv~~Lle~-Gadin~~d~~G~TpLHlAa~~G~----~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~ 745 (1078)
.+ ...+++.|++. |++++..+..|.||||+|+..|+ ..++++|++.|++++.+|..|+||||+|+..|+.++++
T Consensus 158 ~~-~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 236 (285)
T 1wdy_A 158 KG-HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQ 236 (285)
T ss_dssp HT-CHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CC-CHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
T ss_conf 39-89999999996699987548899987899998156233899999999769999886877986899999829999999
Q ss_pred HHHH-CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Q ss_conf 9997-59999988899999999999899999669499999999827974
Q 001436 746 VLLS-LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTS 793 (1078)
Q Consensus 746 ~LL~-~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~~ 793 (1078)
+|+. .|++++. +|..|.||||+|+..|+.+++++|+++|+++
T Consensus 237 ~Ll~~~g~~~~~------~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~ 279 (285)
T 1wdy_A 237 RLLEQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRGAST 279 (285)
T ss_dssp HHHHSSSCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHSSCS
T ss_pred HHHHCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
T ss_conf 999636998545------0899983999999839499999999759999
No 7
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=1.00 E-value=1 Score=243.01 Aligned_cols=222 Identities=13% Similarity=0.120 Sum_probs=175.9
Q ss_pred CCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 23320656239923799999879976678999999813789995799642011212002889997555788998127779
Q 001436 523 VAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL 602 (1078)
Q Consensus 523 ~~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl 602 (1078)
.+.+++||..|+++++..|++.|++ ....+..|.||||+||.+|+ .++++ +++..+++++. ..| .|+|
T Consensus 21 ~t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~--~~g--~t~L-- 88 (364)
T 3ljn_A 21 MEKIHVAARKGQTDEVRRLIETGVS--PTIQNRFGCTALHLACKFGC--VDTAK--YLASVGEVHSL--WHG--QKPI-- 88 (364)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHCC--HHHHH--HHHHHCCCCCC--BTT--BCHH--
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCC--CCC--CCHH--
T ss_conf 9799999980999999999986989--42248999969999998598--99999--99977997545--689--9889--
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH----CCCCCC-----------------CCCCCCC
Q ss_conf 8999999981999986776471319999999615116789988751----299887-----------------6745310
Q 001436 603 HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVE----ANPEKN-----------------LSQHVEK 661 (1078)
Q Consensus 603 ~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~----~ad~n~-----------------~s~~~~~ 661 (1078)
|+|+..++ .++++.|++. +.+.+. .+. ..
T Consensus 89 --------------------------~~A~~~g~--~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g 138 (364)
T 3ljn_A 89 --------------------------HLAVMANK--TDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHC--KG 138 (364)
T ss_dssp --------------------------HHHHHTTC--HHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEE--SC
T ss_pred --------------------------HHHHHCCC--HHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHCCCCCCC--CC
T ss_conf --------------------------99988699--8899999971333587778898630267665403566798--89
Q ss_pred CHHHHHHHHHCC--HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCHHHHH
Q ss_conf 159999999719--79999999968999985589999398999982998889999967999-----63138999508899
Q 001436 662 YQILQKIMKEKL--YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVS-----INFRDLSGWTALHW 734 (1078)
Q Consensus 662 ~t~L~~aa~~~~--~~~lv~~Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gad-----in~~D~~G~TpLH~ 734 (1078)
.++++.++. .+ +..++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+
T Consensus 139 ~t~L~~A~~-~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~ 217 (364)
T 3ljn_A 139 QTALHWCVG-LGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHW 217 (364)
T ss_dssp CCHHHHHHH-SCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHH
T ss_pred CCHHHHHHH-CCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 878999997-4996699999999769997362889998999999829899999998605541235552328899809999
Q ss_pred HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Q ss_conf 99829999999999759999988899999999999899999669499999999827974
Q 001436 735 AAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTS 793 (1078)
Q Consensus 735 Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~~ 793 (1078)
|+..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|+++|+..
T Consensus 218 A~~~g~~~~v~~Ll~~gad~~~------~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 218 AILINWEDVAMRFVEMGIDVNM------EDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp HHTTTCHHHHHHHHTTTCCTTC------CCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred HHHCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHHCHHHHHHHHHHCCCCH
T ss_conf 9975988999999986999888------7999998899999838299999999748805
No 8
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=1.00 E-value=1 Score=241.32 Aligned_cols=246 Identities=15% Similarity=0.092 Sum_probs=209.3
Q ss_pred CHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH---
Q ss_conf 20656239923799999879976678999999813789995799642011212002889997555788998127779---
Q 001436 526 CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL--- 602 (1078)
Q Consensus 526 ~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl--- 602 (1078)
+++||..|+.+++..||+.|+. ....+..|.+|++.++..+. ..+.. ++...+++++..+..| .|++++
T Consensus 63 Lh~A~~~g~~~iv~~Ll~~ga~--~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~d~~g--~t~l~~A~~ 134 (337)
T 4g8k_A 63 LHNAVQMSREDIVELLLRHGAD--PVLRKKNGATPFILAAIAGS--VKLLK--LFLSKGADVNECDFYG--FTAFMEAAV 134 (337)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHTC--HHHHH--HHHTTTCCTTCBCTTC--CBHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCC--HHHHCCCCCCHHHHHHHCCC--CHHHH--HHHHCCCHHHHHCCCC--CCHHHHHHH
T ss_conf 9999984989999999875995--33321578864677775054--13567--7631020055530379--987999987
Q ss_pred --HHHHHHHHHHCCCCCCC----------CCCCCCCHHHHHHHHCCCHHHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHH
Q ss_conf --89999999819999867----------7647131999999961511678998875-1299887674531015999999
Q 001436 603 --HLRLERILSMRSSPQNH----------LSEGLCEKQKLISKIIQLKEEEESYQMV-EANPEKNLSQHVEKYQILQKIM 669 (1078)
Q Consensus 603 --~~rivkLLl~~g~~~~~----------~~~~g~t~lhlA~k~~~ll~e~~~~LL~-~~ad~n~~s~~~~~~t~L~~aa 669 (1078)
+.+++++|+..++..+. .+..|.+++|+|+..++. +++++|++ .+++++..+..+ .++++.++
T Consensus 135 ~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~--~~v~~LL~~~gad~n~~d~~g--~t~l~~~~ 210 (337)
T 4g8k_A 135 YGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV--EVLKILLDEMGADVNACDNMG--RNALIHAL 210 (337)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCH--HHHHHHHHHSCCCTTCCCTTS--CCHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCCCC--CCHHHHHH
T ss_conf 18699999999759983433301322000367897699999987789--999999863498967657889--72789999
Q ss_pred HHC---CHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHH
Q ss_conf 971---979999999968999985589999398999982998889999967-9996313899950889999829999999
Q 001436 670 KEK---LYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCGREKTVA 745 (1078)
Q Consensus 670 ~~~---~~~~lv~~Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~-Gadin~~D~~G~TpLH~Aa~~G~~eiV~ 745 (1078)
... ....++++|++.|++++.+|..|.||||+|+..|+..+++.|+.. |++++.+|..|+||||+|+..|+.++|+
T Consensus 211 ~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~ 290 (337)
T 4g8k_A 211 LSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAE 290 (337)
T ss_dssp HHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
T ss_conf 97375668999999997799988768999987899998512589999987348756676899999999999868799999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Q ss_conf 9997599999888999999999998999996694999999998279743
Q 001436 746 VLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSL 794 (1078)
Q Consensus 746 ~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~ 794 (1078)
+||++||+++. .+|||+|+.+|+.+++++|+++|+++.
T Consensus 291 ~Ll~~GAd~n~-----------~~~L~~A~~~~~~~iv~~Ll~~GA~~d 328 (337)
T 4g8k_A 291 LLCKRGASTDC-----------GDLVMTARRNYDHSLVKVLLSHGAKED 328 (337)
T ss_dssp HHHTTSCSSTT-----------CCHHHHHHHTTCHHHHHHHHHTTCCC-
T ss_pred HHHHCCCCCCC-----------CCHHHHHHHCCCHHHHHHHHHCCCCCC
T ss_conf 99987899998-----------789999998699999999998769989
No 9
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=1.00 E-value=1 Score=240.10 Aligned_cols=226 Identities=16% Similarity=0.135 Sum_probs=189.3
Q ss_pred CCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 78999999813789995799642011212002889997555788998127779899999998199998677647131999
Q 001436 550 RIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQK 629 (1078)
Q Consensus 550 ~~p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl~~rivkLLl~~g~~~~~~~~~g~t~lh 629 (1078)
....+..|.||||+||..|+ .++++ +++..+++++..+..| .+++|
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~--~~~v~--~Ll~~g~~~~~~d~~g------------------------------~t~L~ 58 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQ--TDEVR--RLIETGVSPTIQNRFG------------------------------CTALH 58 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTC--HHHHH--HHHHTTCCTTCCCTTC------------------------------CCHHH
T ss_pred CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC------------------------------CCHHH
T ss_conf 45548899979999998099--99999--9998698942248999------------------------------96999
Q ss_pred HHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHC----CCCCCC---------------
Q ss_conf 9999615116789988751299887674531015999999971979999999968----999985---------------
Q 001436 630 LISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCED----GKGPCI--------------- 690 (1078)
Q Consensus 630 lA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Lle~----Gadin~--------------- 690 (1078)
+|+..++ .+++++|++.+++.+.. ...++++.++. .++..++++|++. |++++.
T Consensus 59 ~A~~~g~--~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (364)
T 3ljn_A 59 LACKFGC--VDTAKYLASVGEVHSLW----HGQKPIHLAVM-ANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGS 131 (364)
T ss_dssp HHHHHCC--HHHHHHHHHHCCCCCCB----TTBCHHHHHHH-TTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETT
T ss_pred HHHHCCC--HHHHHHHHHCCCCCCCC----CCCCHHHHHHH-CCCHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHCC
T ss_conf 9998598--99999999779975456----89988999988-69988999999713335877788986302676654035
Q ss_pred --CCCCCCCHHHHHHHCC--CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCC
Q ss_conf --5899993989999829--98889999967999631389995088999982999999999975999-----99888999
Q 001436 691 --LDDEGQGVLHLAASLG--YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAA-----PGLLTDPS 761 (1078)
Q Consensus 691 --~d~~G~TpLHlAa~~G--~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd-----vna~tdp~ 761 (1078)
.+..|.||||+|+..| +.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+..|++ ++.
T Consensus 132 ~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~----- 206 (364)
T 3ljn_A 132 HVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDY----- 206 (364)
T ss_dssp EEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTC-----
T ss_pred CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC-----
T ss_conf 667988987899999749966999999997699973628899989999998298999999986055412355523-----
Q ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHCCCCC
Q ss_conf 9999999989999966949999999982797433357558899999468759----99999999814799
Q 001436 762 PEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATP 827 (1078)
Q Consensus 762 ~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~----~~~v~~Lle~~a~~ 827 (1078)
+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||++++. .++++.|++.++.+
T Consensus 207 -~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-----~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 207 -ANKQGNSHLHWAILINWEDVAMRFVEMGID-----VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp -CCTTCCCTTHHHHTTTCHHHHHHHHTTTCC-----TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred -CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCH
T ss_conf -288998099999975988999999986999-----8887999998899999838299999999748805
No 10
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=1.00 E-value=1 Score=239.50 Aligned_cols=252 Identities=12% Similarity=-0.004 Sum_probs=185.4
Q ss_pred CCCHHHHHCCCCHHHHHHHHCCCCCC-CCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 33206562399237999998799766-78999999813789995799642011212002889997555788998127779
Q 001436 524 AKCKWSCMFAEVEVPAEVLADGVLCC-RIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL 602 (1078)
Q Consensus 524 ~~~~~Ac~fG~veVv~~LLq~Gv~rC-~~p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl 602 (1078)
+.+++||..|+.+++..|++.|.... ....+..|.||||+||..++ .++++ +++..+++++..+..| .||||+
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~--~~~v~--~Ll~~ga~~~~~~~~g--~tpL~~ 84 (282)
T 1oy3_D 11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGE--ASTVE--KLYAAGAGVLVAERGG--HTALHL 84 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTC--HHHHH--HHHHTTCCSSCCCTTS--CCHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHH
T ss_conf 09999997687889999985477743100647889879999998699--99999--9998699988779899--999999
Q ss_pred -----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHH
Q ss_conf -----899999998199998677647131999999961511678998875129988767453101599999997197999
Q 001436 603 -----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWL 677 (1078)
Q Consensus 603 -----~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~l 677 (1078)
+..++++|+..+............ . ...... ......+++..+.......+
T Consensus 85 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~-------------------~-~~~~~~----~~~~~~~~~~~~~~~~~~~~ 140 (282)
T 1oy3_D 85 ACRVRAHTCACVLLQPRPSHPRDASDTYL-------------------T-QSQDCT----PDTSHAPAAVDSQPNPENEE 140 (282)
T ss_dssp HTTTTCHHHHHHHSSSCCSSCCCC--------------------------------------------------------
T ss_pred HHHCCCCCHHHHHHCCCCCCCHHHHHHHH-------------------H-CCCCCC----CCHHCCHHHHCCCCCCCHHH
T ss_conf 98738840557642347777224677775-------------------2-343458----50110022201356530000
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC-CCHHHHHHHHCCCHHHHHHHHHCCCCCCC
Q ss_conf 99999689999855899993989999829988899999679996313899-95088999982999999999975999998
Q 001436 678 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLS-GWTALHWAAYCGREKTVAVLLSLGAAPGL 756 (1078)
Q Consensus 678 v~~Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~-G~TpLH~Aa~~G~~eiV~~LL~~GAdvna 756 (1078)
...+...+.+++.++..|.||||+|+..|+..++++|+++|++++.++.. |+||||+|+..|+.++|++|+.+|++++.
T Consensus 141 ~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~ 220 (282)
T 1oy3_D 141 EPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTA 220 (282)
T ss_dssp ---CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
T ss_conf 02335554057776789968999999749999999999838987888877896899999883989999999975999866
Q ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 889999999999989999966949999999982797433357558899999468759999
Q 001436 757 LTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKA 816 (1078)
Q Consensus 757 ~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~~~~ 816 (1078)
+|..|.||||+|+..|+.+++++|+++|++ ++.++..|.||++.+....
T Consensus 221 ------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 221 ------RMYGGRTPLGSALLRPNPILARLLRAHGAP-----EPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp ------CCTTSCCHHHHHHTSSCHHHHHHHHHTTCC-----CCCCC--------------
T ss_pred ------CCCCCCCHHHHHHHCCCCHHHHHHHHCCCC-----CCCCCCCCCCCCCCCCCCC
T ss_conf ------446999789999984991799999984998-----5767874556543357865
Done!