Query 001438
Match_columns 1077
No_of_seqs 268 out of 3999
Neff 8.3
Searched_HMMs 29240
Date Tue Mar 26 15:50:18 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001438.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_741-745//hhsearch_pdb/001438hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1380.9 112.6 1042 34-1077 53-1136(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1210.1 97.6 1039 36-1077 28-1090(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 811.7 54.5 578 40-623 737-1319(1321)
4 3qf4_B Uncharacterized ABC tra 1.0 1 1 712.1 65.0 572 40-623 22-593 (598)
5 3qf4_A ABC transporter, ATP-bi 1.0 1 1 710.3 69.6 567 45-621 13-579 (587)
6 3g5u_A MCG1178, multidrug resi 1.0 1 1 709.6 55.7 580 41-623 691-1273(1284)
7 4a82_A Cystic fibrosis transme 1.0 1 1 707.3 66.7 572 44-620 3-576 (578)
8 2yl4_A ATP-binding cassette SU 1.0 1 1 686.3 75.9 574 43-621 7-584 (595)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 682.7 77.9 567 43-621 13-580 (582)
10 3b60_A Lipid A export ATP-bind 1.0 1 1 681.7 72.5 566 43-620 13-579 (582)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1380.94 Aligned_cols=1042 Identities=33% Similarity=0.532 Sum_probs=889.0
Q ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----------------CCCHHHH
Q ss_conf 862121156999998332466999999999999989679899999999999971015----------------8821344
Q 001438 34 KQQQKRSVSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAY----------------LFPKTAS 97 (1077)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~----------------~~~~~~~ 97 (1077)
+++..++++++++|+|+.++++.+++++++++++.|+..|++.+++|++++.+.... .....+.
T Consensus 53 ~~~~~~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (1321)
T 4f4c_A 53 KEEVVNKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFE 132 (1321)
T ss_dssp --CCSSCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHH
T ss_pred HHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 20256877999973156767899999999999999999999999999999999701000145430003443100168999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 58999999999999999999999999999999999999999999999919901120588922899999967999999998
Q 001438 98 HKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALS 177 (1077)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~~~~~~~~G~i~s~~~~D~~~i~~~~~ 177 (1077)
..+..+.+.+++++++.+++.+++.++|.+.++|+..++|.++|++++++|++|||++ ++|+++||+++|++.+++++.
T Consensus 133 ~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~-~~G~l~sr~~~D~~~i~~~~~ 211 (1321)
T 4f4c_A 133 HDVMNVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTN-HSGTLATKLFDNLERVKEGTG 211 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHT-CCTTHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999999978898998799-848999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999899999999999999999999999999999999999999999999999119999996
Q 001438 178 EKVGNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAF 257 (1077)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~Ik~~ 257 (1077)
..++.++..+.++++.++++|+++|.+++++++.+|++.++..++.+...+..++.++..++..+.+.|+++||++||+|
T Consensus 212 ~~l~~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~ 291 (1321)
T 4f4c_A 212 DKIGMAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSL 291 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999899999999999999999999999999999999999999999999999839999982
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 20999999999999999999999999999988999999999999999999999982464787999999999999999998
Q 001438 258 AGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQ 337 (1077)
Q Consensus 258 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~ 337 (1077)
+||+.+.++|.+..++..+...+.....+...+...++..+.+++++|+|.+++..+.+++|.+++++.++..+..|+..
T Consensus 292 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~ 371 (1321)
T 4f4c_A 292 NGLRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGL 371 (1321)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 14299999999999999999999999999999999999999999999999999995998699999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEC
Q ss_conf 57989999999999999999734585665566667777887641899868998599999642000038852996999983
Q 001438 338 AAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVG 417 (1077)
Q Consensus 338 l~~~~~~~~~a~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~~~i~~g~~~~ivG 417 (1077)
+++.+..+.++.++++|++++++.+++.+.....+....+.++.|+|+||+|+||++++.++|+|+||++++|++++|||
T Consensus 372 ~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG 451 (1321)
T 4f4c_A 372 AGPQLAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVG 451 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEE
T ss_conf 99999999999999999999971785345666556567788876799985540799998743333188622882789980
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 99995899999996046798417999995279999788742046880678764001899985399999999999999997
Q 001438 418 GSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLS 497 (1077)
Q Consensus 418 ~~GsGKStl~~~l~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~ 497 (1077)
|||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++++||+|+||+|++||||||.+|.++.+++++.+||+.+
T Consensus 452 ~sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a 531 (1321)
T 4f4c_A 452 SSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMA 531 (1321)
T ss_dssp CSSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHC
T ss_conf 58985778888754565164486157996501125999850466658753320786167886415522099999999875
Q ss_pred HHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 09998841852101020299999994899999999985139989998276889998989999999998707973999825
Q 001438 498 EAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAH 577 (1077)
Q Consensus 498 ~~~~~i~~l~~g~~t~ig~~g~~lSgGqkqri~lARal~~~~~illlDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~itH 577 (1077)
++++||+.||+||+|.|||+|.+|||||||||+||||+|+||+|+||||||||||+++|+.+++++.++.+++|+|+|||
T Consensus 532 ~l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaH 611 (1321)
T 4f4c_A 532 NAEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAH 611 (1321)
T ss_dssp TCHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECS
T ss_pred CCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 65468870888886075589887777787999999987259998998455446887899999999999847988999736
Q ss_pred CCHHHHHCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHCCC----CCCCCCC-CCCCCC--CCCCCCCC-
Q ss_conf 923675039899997988999629468850999368999999997300378----8889999-988643--33323458-
Q 001438 578 RLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQLQEAASQQSN----SSQCPNM-GRPLSI--KFSRELSG- 649 (1077)
Q Consensus 578 ~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~-~~~~~~--~~~~~~~~- 649 (1077)
|++++++||+|+||++|+|+|+|+|+||+++ +|.|+++++.|......+. ....++. ...... ...++...
T Consensus 612 rls~i~~aD~Iivl~~G~ive~Gth~eL~~~-~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1321)
T 4f4c_A 612 RLSTIRNADLIISCKNGQVVEVGDHRALMAQ-QGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEM 690 (1321)
T ss_dssp CTTTTTTCSEEEEEETTEEEEEECHHHHHTT-TCHHHHHHHHHHHHHHHHHHHCC-------------------------
T ss_pred CHHHHHHCCEEEEEECCEEECCCCHHHHHHH-HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 3878986898999639965136899999985-327999999622122223323344332232111222223422222221
Q ss_pred ----CCC-CCCCCCCCCCHHHCCCCCC----------CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf ----777-6555655420100136877----------8888522101239999742035357899999999998657869
Q 001438 650 ----TRT-SFGASFRSEKESVLSHGAA----------DATEPATAKHVSAIKLYSMVRPDWTYGVCGTICAIIAGAQMPL 714 (1077)
Q Consensus 650 ----~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (1077)
.+. ..........+..+..... ...++........++++++.+++|.++..+..++.+.+...|.
T Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~ 770 (1321)
T 4f4c_A 691 DDIMNRVRSSTIGSITNGPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPT 770 (1321)
T ss_dssp -------------------------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHH
T ss_pred CCHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 10221110132124567740257775315403899999999707863109999999877899999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999986306902567879899999999999999999999999999999999999999999998198664244567
Q 001438 715 FALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDN 794 (1077)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~Lr~~lf~~ll~~p~~FFD~~~~ 794 (1077)
+++.+...+..++............|.++|++++++.+++.+++.+++.+++.+++.+||.++|++++++|++|||.++|
T Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~ 850 (1321)
T 4f4c_A 771 YSVFFTSFMNVFAGNPADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQN 850 (1321)
T ss_dssp HHHHHHHHHHHTSSCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGG
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC
T ss_conf 99999999987517934556678999999999999999999999999999999999999999988873499333216788
Q ss_pred CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 71137888752099999997756999999999999999999988679999999899899999999999997551148899
Q 001438 795 SSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKA 874 (1077)
Q Consensus 795 ~~G~IlnR~s~D~~~i~~~l~~~l~~~l~~~~~~i~~i~i~~~~~w~l~l~~l~~~Pl~~~~~~~~~~~~~~~~~~~~~~ 874 (1077)
|+|+|+|||++|++.++..++..+..++..++.++++++++++.+|++++++++++|+.++..+...++......+..+.
T Consensus 851 ~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1321)
T 4f4c_A 851 ASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASE 930 (1321)
T ss_dssp CHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSH
T ss_pred CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 84888850250599999999999999999865377770221378689999999988899999999999999999999999
Q ss_pred HHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99996999999700388987225089999999985433378789999999999999999999999999997998631777
Q 001438 875 YLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELA 954 (1077)
Q Consensus 875 ~~~~~~~~~Etl~Gi~TIra~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~l~~~~~~ 954 (1077)
..+....+.|+++|++|||+|++|+++.++|.+.++...+..++.....++.++....+..+..++++|+|+.++..+..
T Consensus 931 ~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~ 1010 (1321)
T 4f4c_A 931 FADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPP 1010 (1321)
T ss_dssp HHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 88898899999962798886141488999999999999999999999999999999999999999999875788753765
Q ss_pred CHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCCEEEEEEEEECCCCC
Q ss_conf 9889--999999999999999998954345999999999999987378876678-8854566432189942446499987
Q 001438 955 SFKS--VMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGD-IGEELTNVEGTIELRGVHFSYPSRP 1031 (1077)
Q Consensus 955 ~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~-~~~~~~~~~G~I~f~nVsf~Y~~~~ 1031 (1077)
+.+. .+..+.++.....+++......+.+.++..+.+|++++++.+++.++. .+.+.++..|+|+|+||+|+||++|
T Consensus 1011 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~ 1090 (1321)
T 4f4c_A 1011 TMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSLAGEKKKLYGKVIFKNVRFAYPERP 1090 (1321)
T ss_dssp SSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTCCCSBCCCCCCCEEEEEEEECCTTSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC
T ss_conf 42147899999999877889999999999999999999989998607665777667787888888189998798579999
Q ss_pred CCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 6343456216652898899987999977989988940168999989
Q 001438 1032 EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKA 1077 (1077)
Q Consensus 1032 ~~~VLk~isl~I~~GekVaIVGrTGsGKSTli~lL~Rlydp~~G~i 1077 (1077)
+.+||||+||+|+||||||||||||||||||+++|+|||||++|+|
T Consensus 1091 ~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I 1136 (1321)
T 4f4c_A 1091 EIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEI 1136 (1321)
T ss_dssp SSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEE
T ss_pred CCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
T ss_conf 8821245169988989999989999819999999956863899789
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1210.09 Aligned_cols=1039 Identities=35% Similarity=0.641 Sum_probs=879.1
Q ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------CCC---------HHHHHHH
Q ss_conf 2121156999998332466999999999999989679899999999999971015------882---------1344589
Q 001438 36 QQKRSVSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAY------LFP---------KTASHKV 100 (1077)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~------~~~---------~~~~~~~ 100 (1077)
++...++++++++|..++++.+++++.+++++.++..|+++++++.++|.+.... ... ......+
T Consensus 28 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (1284)
T 3g5u_A 28 EKKPAVSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEM 107 (1284)
T ss_dssp -----CTTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 66666569999987265799999999999999999999999999999999861344433222222111110024468899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999919901120588922899999967999999998999
Q 001438 101 AKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKV 180 (1077)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~~~~~~~~G~i~s~~~~D~~~i~~~~~~~~ 180 (1077)
..+.+.+++++++..++.+++.+++.+.+.++..++|.++|++++++|++|||+. ++|+++||+++|++.+++.+...+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~-~~G~l~sr~~~D~~~i~~~~~~~~ 186 (1284)
T 3g5u_A 108 TTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVH-DVGELNTRLTDDVSKINEGIGDKI 186 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSC-CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999986998997568-877899999988999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 99999999999999999999899999999999999999999999999999999999999999999999119999996209
Q 001438 181 GNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGE 260 (1077)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~Ik~~~~e 260 (1077)
..++..+.++++.++++++++|.+++++++.+|++.++..++.+...+..++.++..++....+.|+++|+++||+|++|
T Consensus 187 ~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e 266 (1284)
T 3g5u_A 187 GMFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQ 266 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCH
T ss_conf 99999999999999999999899999999999999999999999999999999999999999999999787999984653
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999988999999999999999999999982464787999999999999999998579
Q 001438 261 DKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAP 340 (1077)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~l~~ 340 (1077)
+.+.++|.+..++..+...+.....+...++..++..+.+++.+|+|++++..+.+++|.+++++..+.....++..+.+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~ 346 (1284)
T 3g5u_A 267 KKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASP 346 (1284)
T ss_dssp CSHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999992998899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCC
Q ss_conf 89999999999999999734585665566667777887641899868998599999642000038852996999983999
Q 001438 341 DITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSG 420 (1077)
Q Consensus 341 ~~~~~~~a~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~~~i~~g~~~~ivG~~G 420 (1077)
.+..+.++..++.|++++++.+++.+.....+...++..+.|+++|++|+|+++++.++|+|+||++++||+++||||||
T Consensus 347 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sG 426 (1284)
T 3g5u_A 347 NIEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSG 426 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCC
T ss_conf 99999999999999999972898677666567777777771899998997699998710125458975998899989999
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 95899999996046798417999995279999788742046880678764001899985399999999999999997099
Q 001438 421 SGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAM 500 (1077)
Q Consensus 421 sGKStl~~~l~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~ 500 (1077)
||||||+++|.|+|+|++|+|.+||+|+.+++.+++|++++||+|+|++|++||+|||.+|.++.+++++.++|+.++++
T Consensus 427 sGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~ 506 (1284)
T 3g5u_A 427 CGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAY 506 (1284)
T ss_dssp SSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCH
T ss_conf 97999999980788999738999999877579999986548986887537766999974579899999999999982969
Q ss_pred HHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCH
Q ss_conf 98841852101020299999994899999999985139989998276889998989999999998707973999825923
Q 001438 501 SFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLS 580 (1077)
Q Consensus 501 ~~i~~l~~g~~t~ig~~g~~lSgGqkqri~lARal~~~~~illlDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~itH~~~ 580 (1077)
+++..+|+|++|.+|++|.+||||||||++||||++++|+|+|||||||+||+++++.+++.+++..+++|+|+||||++
T Consensus 507 ~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~ 586 (1284)
T 3g5u_A 507 DFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLS 586 (1284)
T ss_dssp HHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHH
T ss_conf 99974656334501478786599999999999999529998999798777799999999999999739998999940778
Q ss_pred HHHHCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCCCCC----CCCCCC
Q ss_conf 6750398999979889996294688509993689999999973003788889-99998864333323458----777655
Q 001438 581 TIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQLQEAASQQSNSSQC-PNMGRPLSIKFSRELSG----TRTSFG 655 (1077)
Q Consensus 581 ~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~ 655 (1077)
++..||+|++|++|+++|+|+|+|++++ ++.|.+++..|............ ................. ......
T Consensus 587 ~i~~~d~i~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (1284)
T 3g5u_A 587 TVRNADVIAGFDGGVIVEQGNHDELMRE-KGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTR 665 (1284)
T ss_dssp HHTTCSEEEECSSSCCCCEECHHHHHHT-TSHHHHHHHHTC---------------------------------------
T ss_pred HHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9974998999989999997889999867-877999999743002211133333322222344333333332000345433
Q ss_pred CCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--HHH
Q ss_conf 565542010013687788885221012399997420353578999999999986578699999999998630690--256
Q 001438 656 ASFRSEKESVLSHGAADATEPATAKHVSAIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDW--DTT 733 (1077)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 733 (1077)
..... ..............+........++++++.+++|+++..+.+++++.+...+.+++.+..++..+.... ...
T Consensus 666 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 744 (1284)
T 3g5u_A 666 KSICG-PHDQDRKLSTKEALDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQ 744 (1284)
T ss_dssp -------------------CCCCCSCCCTTHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHH
T ss_pred CCCCC-CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 34456-42233211024555313662589999998451579999999999999999999999999999998556850336
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHH
Q ss_conf 78798999999999999999999999999999999999999999999981986642445677113788875209999999
Q 001438 734 QREVKKITILFCCAAVITVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTI 813 (1077)
Q Consensus 734 ~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~Lr~~lf~~ll~~p~~FFD~~~~~~G~IlnR~s~D~~~i~~~ 813 (1077)
......+..++++++++..++.+++.+.+.+.+.++..++|.++|++++++|++|||.+.+++|+|+||+++|++.++..
T Consensus 745 ~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~ 824 (1284)
T 3g5u_A 745 RQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGA 824 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 77999999999999999999999999999999999999999999999983998887578998899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 77569999999999999999999886799999998998999999999999975511488999999699999970038898
Q 001438 814 VVDRSTILIQNFGLVTASFVIAFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVA 893 (1077)
Q Consensus 814 l~~~l~~~l~~~~~~i~~i~i~~~~~w~l~l~~l~~~Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Etl~Gi~TIr 893 (1077)
++..+..++..+..++++++++++++|++++++++++|++++..+...+++++...+.++........+.|++.|++|||
T Consensus 825 ~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~ 904 (1284)
T 3g5u_A 825 TGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVV 904 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999996999999999999999999999999999999999999999999999998899999
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 72250899999999854333787899999999999999999999999999979986317779889999999999999999
Q 001438 894 AFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAM 973 (1077)
Q Consensus 894 a~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~l~~~~~~~~~~l~~~~~~~~~~~~~~ 973 (1077)
+|++|+++.++|.+..+...+...+.....+...++.+.+.++..++++|+|+.++..+.++.++++.++.+......++
T Consensus 905 a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1284)
T 3g5u_A 905 SLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAV 984 (1284)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 84659999999999999999999999999999999999999999999999999999909806999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCCEEEE
Q ss_conf 998954345999999999999987378876678--885456643218994244649998763434562166528988999
Q 001438 974 GETLALVPDLLKGNQMAASVFEVLDRKTQVIGD--IGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMAL 1051 (1077)
Q Consensus 974 ~~~~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~--~~~~~~~~~G~I~f~nVsf~Y~~~~~~~VLk~isl~I~~GekVaI 1051 (1077)
+......+.+.++..+.+|++++++.+++.+.. .+..+++.+|.|+|+||+|+||++++.++|+|+||+|++||++||
T Consensus 985 ~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~i 1064 (1284)
T 3g5u_A 985 GQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLAL 1064 (1284)
T ss_dssp HHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEE
T ss_conf 99999999999999999999999838876666555665456777857999989977999987002030599769988999
Q ss_pred ECCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 87999977989988940168999989
Q 001438 1052 VGQSGSGKSTVLSLILRFYDPTAGKA 1077 (1077)
Q Consensus 1052 VGrTGsGKSTli~lL~Rlydp~~G~i 1077 (1077)
||||||||||++.+|+|+|+|++|+|
T Consensus 1065 vG~sGsGKSTl~~~l~g~~~p~~G~I 1090 (1284)
T 3g5u_A 1065 VGSSGCGKSTVVQLLERFYDPMAGSV 1090 (1284)
T ss_dssp ECSSSTTHHHHHHHHTTSSCCSEEEE
T ss_pred ECCCCCCHHHHHHHHHCCCCCCCCEE
T ss_conf 88999978999999946867899779
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=811.73 Aligned_cols=578 Identities=36% Similarity=0.557 Sum_probs=498.8
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 15699999833246699999999999998967989999999999997101588213445899999999999999999999
Q 001438 40 SVSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSW 119 (1077)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (1077)
..++++++.+..++ +..++++.+++.+.+...|.+..+++..++.+... +.........+..++++++++..++.+
T Consensus 737 ~~~~~~~~~~~~~~-~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~i~~~ 812 (1321)
T 4f4c_A 737 KTNLFEILYHARPH-ALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGN---PADFLSQGHFWALMFLVLAAAQGICSF 812 (1321)
T ss_dssp CCCHHHHHHHTGGG-HHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSC---SSTTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 31099999998778-99999999999999999999999999999875179---345566789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999991990112058-8922899999967999999998999999999999999999999
Q 001438 120 IEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTE-ASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGF 198 (1077)
Q Consensus 120 ~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~~~~~-~~~G~i~s~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (1077)
+..+++.+.+.++..++|..++++++++|++|||.. .++|+++||+++|++.+++.+...+..++..+..+++.+++++
T Consensus 813 ~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~ 892 (1321)
T 4f4c_A 813 LMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAF 892 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEH
T ss_conf 99999999999999999999988873499333216788848888502505999999999999999998653777702213
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99899999999999999999999999999999999999999999999999119999996209999999999999999999
Q 001438 199 ARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYG 278 (1077)
Q Consensus 199 ~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~Ik~~~~e~~~~~~~~~~~~~~~~~~ 278 (1077)
+++|.++++.++++|++++...+..+.......+.++...+....+.|+++|+++||+|++|+.+.+++.+..+...+..
T Consensus 893 ~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~ 972 (1321)
T 4f4c_A 893 FYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEA 972 (1321)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 78689999999988899999999999999999999999888988999999627988861414889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999998899999999999999999999998246478--79999999999999999985798999999999999999
Q 001438 279 RKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNG--GESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIF 356 (1077)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~l~~l~~~~~~~~~a~~~~~ri~ 356 (1077)
.+.....++..++...+..+..+++++++..++..+..+. +.++..+........++..+......+.++..+.+|++
T Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~ 1052 (1321)
T 4f4c_A 973 IKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIF 1052 (1321)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999875788753765421478999999998778899999999999999999999899
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCC
Q ss_conf 97345856655666677778876418998689985999996420000388529969999839999589999999604679
Q 001438 357 EMIERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP 436 (1077)
Q Consensus 357 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~~~i~~g~~~~ivG~~GsGKStl~~~l~~~~~~ 436 (1077)
++++.+++.+.... ....++..|.|+|+||+|+||++++.++|+|+||+|++||++|||||||||||||+++|.|+|+|
T Consensus 1053 ~~l~~~~~~~~~~~-~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p 1131 (1321)
T 4f4c_A 1053 GMLRKISKIDSLSL-AGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDT 1131 (1321)
T ss_dssp HHHHCCCSSCTTCC-CSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCC
T ss_pred HHHHCCCCCCCCCC-CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf 98607665777667-78788888818999879857999988212451699889899999899998199999999568638
Q ss_pred CCCEEEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 8417999995279999788742046880678764001899985399--99999999999999709998841852101020
Q 001438 437 LSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGK--DDATMEEITRAAKLSEAMSFISNLPERFETQV 514 (1077)
Q Consensus 437 ~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~--~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i 514 (1077)
++|+|.+||+|+++++.+++|+++++|||+|++|+|||||||.+|. ++.+++++++||+.+++++||..+|+|+||.|
T Consensus 1132 ~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~v 1211 (1321)
T 4f4c_A 1132 LGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRV 1211 (1321)
T ss_dssp SSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEE
T ss_pred CCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEE
T ss_conf 99789999998654999999854599878997327239999745499999999999999998298499971767899982
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCEEEEEECC
Q ss_conf 29999999489999999998513998999827688999898999999999870797399982592367503989999798
Q 001438 515 GERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGR 594 (1077)
Q Consensus 515 g~~g~~lSgGqkqri~lARal~~~~~illlDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~itH~~~~~~~~d~i~~l~~G 594 (1077)
||+|.+||||||||||||||++++|+|+|||||||+||+++|+.|++.|++..+++|+|+||||++++.+||+|+|||+|
T Consensus 1212 ge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G 1291 (1321)
T 4f4c_A 1212 GDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNG 1291 (1321)
T ss_dssp TTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECC
T ss_conf 38891569999999999999971799899968111578999999999999973999899960689999969999999898
Q ss_pred EEEEECCHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 89996294688509993689999999973
Q 001438 595 KIVKTGSHEELISNPNSAYAALVQLQEAA 623 (1077)
Q Consensus 595 ~i~~~g~~~~l~~~~~~~~~~l~~~~~~~ 623 (1077)
+|+|+|+|+||+++ +|.|++|++.|..+
T Consensus 1292 ~IvE~Gth~eLl~~-~g~y~~L~~~Q~~e 1319 (1321)
T 4f4c_A 1292 TIIEKGTHTQLMSE-KGAYYKLTQKQMTE 1319 (1321)
T ss_dssp SEEEEECHHHHHHC-C-------------
T ss_pred EEEEECCHHHHHHC-CCHHHHHHHHHHHC
T ss_conf 99998888999849-80999999999850
No 4
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=712.14 Aligned_cols=572 Identities=30% Similarity=0.438 Sum_probs=502.3
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 15699999833246699999999999998967989999999999997101588213445899999999999999999999
Q 001438 40 SVSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSW 119 (1077)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (1077)
...+.+++++..++ +..++.+.++.++.+++.+..+++++.++|.+.... + ...+..+...++++.++..++.+
T Consensus 22 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~ 95 (598)
T 3qf4_B 22 TATLRRLLGYLRPH-TFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPR-R----FDLLPRYMLILGTIYALTSLLFW 95 (598)
T ss_dssp HHHHHHHGGGTGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT-C----GGGHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-C----HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999-999999999999999999999999999999997368-8----89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999199011205889228999999679999999989999999999999999999999
Q 001438 120 IEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFA 199 (1077)
Q Consensus 120 ~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~~~~~~~~G~i~s~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (1077)
++.+++.+.+.++..++|..++++++++|+.||++. ++|++++|+++|++.+++.+...+..++..+..+++.+++++.
T Consensus 96 ~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~-~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~ 174 (598)
T 3qf4_B 96 LQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRT-PHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFR 174 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCTHHHHHS-CHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999977999997688-8899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98999999999999999999999999999999999999999999999991199999962099999999999999999999
Q 001438 200 RVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGR 279 (1077)
Q Consensus 200 ~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~Ik~~~~e~~~~~~~~~~~~~~~~~~~ 279 (1077)
++|.++++.++.+|+..++..++.+...+..++.++..++....+.|.++|+++||+|++|+.+.+++.+..++..+...
T Consensus 175 ~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~ 254 (598)
T 3qf4_B 175 VNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGT 254 (598)
T ss_dssp HCHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98999999999999999999999999999999999999999999999973799999748709999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999889999999999999999999999824647879999999999999999985798999999999999999973
Q 001438 280 KAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMI 359 (1077)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~a~~~~~ri~~~l 359 (1077)
+.....+....+..++..+..+++++++++++..+.+++|.+++++.+......|+..+...+..+.++..+++|+.+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l 334 (598)
T 3qf4_B 255 KAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEIL 334 (598)
T ss_dssp HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999859978999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 45856655666677778876418998689985999996420000388529969999839999589999999604679841
Q 001438 360 ERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSG 439 (1077)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~~~i~~g~~~~ivG~~GsGKStl~~~l~~~~~~~~G 439 (1077)
+.+++.+.. .....++..+.|+++|++|+|++ +.++|+|+||++++||+++|+||||||||||+++|.|+++|++|
T Consensus 335 ~~~~~~~~~--~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G 410 (598)
T 3qf4_B 335 DLEEEKDDP--DAVELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRG 410 (598)
T ss_dssp TSCCCCCCS--SCCCCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEE
T ss_pred CCCCCCCCC--CCCCCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCE
T ss_conf 688777777--77777777771899998997799--98601222799869988999899999699999999458579980
Q ss_pred EEEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCC
Q ss_conf 79999952799997887420468806787640018999853999999999999999970999884185210102029999
Q 001438 440 EILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGI 519 (1077)
Q Consensus 440 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ig~~g~ 519 (1077)
+|.+||+|+.+++.+++|++++||+|+|++|++|++|||.++.++.+++++.++++.++++++++.+|+|++|.+|++|.
T Consensus 411 ~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~ 490 (598)
T 3qf4_B 411 QILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGE 490 (598)
T ss_dssp EEEETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHT
T ss_pred EEEECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCC
T ss_conf 89999998301889999841089907982324639999744799999999999999969788897464532364227889
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCEEEEEECCEEEEE
Q ss_conf 99948999999999851399899982768899989899999999987079739998259236750398999979889996
Q 001438 520 QLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKT 599 (1077)
Q Consensus 520 ~lSgGqkqri~lARal~~~~~illlDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~itH~~~~~~~~d~i~~l~~G~i~~~ 599 (1077)
+||||||||++||||++++|+|++||||||+||++++..+.+.+.+..+++|+|+||||++++..||+|++|++|+++++
T Consensus 491 ~LSgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~ 570 (598)
T 3qf4_B 491 DLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEM 570 (598)
T ss_dssp TSCHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEEC
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEE
T ss_conf 87999999999999996499999998976679999999999999998089989999427789971998999989999987
Q ss_pred CCHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 294688509993689999999973
Q 001438 600 GSHEELISNPNSAYAALVQLQEAA 623 (1077)
Q Consensus 600 g~~~~l~~~~~~~~~~l~~~~~~~ 623 (1077)
|+|+|++++ ++.|.+++..|...
T Consensus 571 g~~~~l~~~-~~~~~~~~~~~~~~ 593 (598)
T 3qf4_B 571 GKHDELIQK-RGFYYELFTSQYGL 593 (598)
T ss_dssp SCHHHHHHT-TCHHHHHHHHHHGG
T ss_pred CCHHHHHHC-CCHHHHHHHHHHHH
T ss_conf 789999867-87799999997646
No 5
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=710.29 Aligned_cols=567 Identities=25% Similarity=0.353 Sum_probs=493.0
Q ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99983324669999999999999896798999999999999710158821344589999999999999999999999999
Q 001438 45 KLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSC 124 (1077)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (1077)
++++|.+++ +..+.++.++.++.+++.+..+++++.++|...... + ...+..+...++++.+...++.++..++
T Consensus 13 ~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (587)
T 3qf4_A 13 TLARYLKPY-WIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARG-D----FSLVLKTGILMLIVALIGAVGGIGCTVF 86 (587)
T ss_dssp CGGGGTGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT-C----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-C----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999-999999999999999999999999999999987369-8----7999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999919901120588922899999967999999998999999999999999999999998999
Q 001438 125 WMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQI 204 (1077)
Q Consensus 125 ~~~~~~~~~~~lr~~~~~~il~~~~~~~~~~~~~G~i~s~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 204 (1077)
+.+.+.++..++|.+++++++++|..+|++. ++|+++||+++|++.+++.+...+..++..++.+++.+++++.++|.+
T Consensus 87 ~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~-~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 165 (587)
T 3qf4_A 87 ASYASQNFGADLRRDLFRKVLSFSISNVNRF-HTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKL 165 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999978897997658-889999999999999999999999999999999999999999998999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999119999996209999999999999999999999999
Q 001438 205 SLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLA 284 (1077)
Q Consensus 205 ~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 284 (1077)
++++++.+|++.++..++.+...+..++.++..++..+.+.|.++|+++||+|++|+.+.+++.+..++..+...+....
T Consensus 166 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 245 (587)
T 3qf4_A 166 SSVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSL 245 (587)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998559999986214999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99988999999999999999999999982464787999999999999999998579899999999999999997345856
Q 001438 285 KGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTM 364 (1077)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~a~~~~~ri~~~l~~~~~ 364 (1077)
.+...+...++..+..+++++++++++..+.++.|.+++++.+......|+..++..+..+.++..+++|+.++++.+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~ 325 (587)
T 3qf4_A 246 IVFALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPA 325 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999999984993899999999999999999999999999999999999999999768976
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 65566667777887641899868998599999642000038852996999983999958999999960467984179999
Q 001438 365 SKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLD 444 (1077)
Q Consensus 365 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~~~i~~g~~~~ivG~~GsGKStl~~~l~~~~~~~~G~i~~~ 444 (1077)
.++.. .....++.++.|+++|++|+|++. +.++|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.+|
T Consensus 326 ~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~ 403 (587)
T 3qf4_A 326 IEEAD-NALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVD 403 (587)
T ss_dssp CCCCT-TCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEES
T ss_pred CCCCC-CCCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEC
T ss_conf 57887-765668888807997889984899-9764211179986998899989999979999999927866998679899
Q ss_pred CEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHH
Q ss_conf 95279999788742046880678764001899985399999999999999997099988418521010202999999948
Q 001438 445 GNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGG 524 (1077)
Q Consensus 445 g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ig~~g~~lSgG 524 (1077)
|+|+.+++.+++|++++||+|+|++|++|++|||.++.++.+++++.++++.++++++++.+|+|++|.++++|.+||||
T Consensus 404 g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgG 483 (587)
T 3qf4_A 404 ELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGG 483 (587)
T ss_dssp SSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHH
T ss_pred CEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHH
T ss_conf 99834078999984138977898676755999985248899999999999996849999756531212751898992999
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHH
Q ss_conf 99999999985139989998276889998989999999998707973999825923675039899997988999629468
Q 001438 525 QKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEE 604 (1077)
Q Consensus 525 qkqri~lARal~~~~~illlDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~ 604 (1077)
||||++||||++++|+|++||||||+||+++++.+.+.+++..+++|+|+||||++++..||+|++|++|+++++|+|+|
T Consensus 484 qrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~e 563 (587)
T 3qf4_A 484 QKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKE 563 (587)
T ss_dssp HHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHH
T ss_conf 99999999999729999999797544799999999999998679998999822768898199899998998999788999
Q ss_pred HHCCCCCHHHHHHHHHH
Q ss_conf 85099936899999999
Q 001438 605 LISNPNSAYAALVQLQE 621 (1077)
Q Consensus 605 l~~~~~~~~~~l~~~~~ 621 (1077)
++++ ++.|.+++..|.
T Consensus 564 l~~~-~~~~~~~~~~~~ 579 (587)
T 3qf4_A 564 LLEH-CKPYREIYESQF 579 (587)
T ss_dssp HHHH-CHHHHHHHHHHC
T ss_pred HHHC-CCHHHHHHHHHH
T ss_conf 9867-839999999984
No 6
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=709.62 Aligned_cols=580 Identities=35% Similarity=0.611 Sum_probs=502.3
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 56999998332466999999999999989679899999999999971015882134458999999999999999999999
Q 001438 41 VSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWI 120 (1077)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (1077)
.++++++++..+. +..+.++.+++++.+...|.++++++.+++.+.... ...........+...+++++++..++.++
T Consensus 691 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 768 (1284)
T 3g5u_A 691 ASFWRILKLNSTE-WPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGG-PPETQRQNSNLFSLLFLILGIISFITFFL 768 (1284)
T ss_dssp CCTTHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC-STTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5899999984515-799999999999999999999999999999985568-50336779999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999199011205-889228999999679999999989999999999999999999999
Q 001438 121 EVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDT-EASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFA 199 (1077)
Q Consensus 121 ~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~~~~-~~~~G~i~s~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (1077)
+.+++.+.+.+...++|..++++++++|++|||. +.++|++++|+++|++.+++.+...+..++..+..++..+++++.
T Consensus 769 ~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~i~~~~ 848 (1284)
T 3g5u_A 769 QGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLI 848 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999983998887578998899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98999999999999999999999999999999999999999999999991199999962099999999999999999999
Q 001438 200 RVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGR 279 (1077)
Q Consensus 200 ~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~Ik~~~~e~~~~~~~~~~~~~~~~~~~ 279 (1077)
++|.+++++++.+|++++...+..+.......+.++...+......|+++|+++||+|++|+.+.+++.+..+...+...
T Consensus 849 ~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~~~~~~~~~~~ 928 (1284)
T 3g5u_A 849 YGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAM 928 (1284)
T ss_dssp SCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 96999999999999999999999999999999999999999999999998899999846599999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999889999999999999999999999824647879999999999999999985798999999999999999973
Q 001438 280 KAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMI 359 (1077)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~a~~~~~ri~~~l 359 (1077)
+.....+...++...+..+.+++.+|+|++++..+.++.+.++.++........++..+......+.++..+..|+++++
T Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l 1008 (1284)
T 3g5u_A 929 KKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRII 1008 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSSCCSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999909806999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 45856655666677778876418998689985999996420000388529969999839999589999999604679841
Q 001438 360 ERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSG 439 (1077)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~~~i~~g~~~~ivG~~GsGKStl~~~l~~~~~~~~G 439 (1077)
+.+++.+.........+...+.|+++||+|+|+++++.++|+|+||++++||+++||||||||||||+++|.|+++|++|
T Consensus 1009 ~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G 1088 (1284)
T 3g5u_A 1009 EKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAG 1088 (1284)
T ss_dssp HSCCSSSSCCSSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 38876666555665456777857999989977999987002030599769988999889999789999999468678997
Q ss_pred EEEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCC--CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
Q ss_conf 79999952799997887420468806787640018999853999--9999999999999709998841852101020299
Q 001438 440 EILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGER 517 (1077)
Q Consensus 440 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ig~~ 517 (1077)
+|.+||+|+.+++.+++|++++||+|+|.+|++||+|||.++.+ ..+++++.++++.+++++++..+|+|++|.+||+
T Consensus 1089 ~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~ 1168 (1284)
T 3g5u_A 1089 SVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDK 1168 (1284)
T ss_dssp EEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTT
T ss_pred EEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
T ss_conf 79899998000789999702689877874066669999746687789999999999998395999972704245611788
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCEEEEEECCEEE
Q ss_conf 99999489999999998513998999827688999898999999999870797399982592367503989999798899
Q 001438 518 GIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIV 597 (1077)
Q Consensus 518 g~~lSgGqkqri~lARal~~~~~illlDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~itH~~~~~~~~d~i~~l~~G~i~ 597 (1077)
|.+||||||||++||||++++|+|+|||||||+||..+++.+++.+++..+++|+|+||||++++..||+|++|++|+++
T Consensus 1169 G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi~isH~l~~i~~~dri~vl~~G~i~ 1248 (1284)
T 3g5u_A 1169 GTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVK 1248 (1284)
T ss_dssp SCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEEEECSCTTGGGSCSEEEEEETBEEE
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEE
T ss_conf 89338999999999999974999999868755579999999999999867999899995587999809989999899899
Q ss_pred EECCHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 96294688509993689999999973
Q 001438 598 KTGSHEELISNPNSAYAALVQLQEAA 623 (1077)
Q Consensus 598 ~~g~~~~l~~~~~~~~~~l~~~~~~~ 623 (1077)
|+|+|+|++++ +|.|+++++.|...
T Consensus 1249 ~~g~~~~l~~~-~g~y~~l~~~q~~~ 1273 (1284)
T 3g5u_A 1249 EHGTHQQLLAQ-KGIYFSMVSVQAGA 1273 (1284)
T ss_dssp EEECHHHHHHS-CSHHHHHHHHHC--
T ss_pred EECCHHHHHHC-CCHHHHHHHHHHHC
T ss_conf 97789999847-77799999997613
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=707.30 Aligned_cols=572 Identities=30% Similarity=0.399 Sum_probs=493.4
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-HH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998332466999999999999989679899999999999971015882-13-44589999999999999999999999
Q 001438 44 FKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFP-KT-ASHKVAKYSLDFVYLSVAILFSSWIE 121 (1077)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (1077)
+++++|.+++++ .++++.++.++.++..+..+++++.++|.+....... .. .......+...++++.+...++.+++
T Consensus 3 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (578)
T 4a82_A 3 KRYLQFVKPYKY-RIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIR 81 (578)
T ss_dssp HHHHHHHGGGHH-HHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999889999-9999999999999999999999999999998168711467788889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999919901120588922899999967999999998999999999999999999999998
Q 001438 122 VSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARV 201 (1077)
Q Consensus 122 ~~~~~~~~~~~~~~lr~~~~~~il~~~~~~~~~~~~~G~i~s~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (1077)
.++..+.+.++..++|..++++++++|..+|++ .++|++++|+++|++.+++.+...+..++..+..+++.+++++.++
T Consensus 82 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~-~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 160 (578)
T 4a82_A 82 QYLAQWTSNKILYDIRKKLYNHLQALSARFYAN-NQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD 160 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHT-SCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999998789999768-9869999999999999999999999999999999999999999996
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999119999996209999999999999999999999
Q 001438 202 WQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKA 281 (1077)
Q Consensus 202 ~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 281 (1077)
|.++++.++.+|++.++..++.+...+..++.++..++..+.+.|.++|+++||+|++|+.+.+++.+..++..+...+.
T Consensus 161 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (578)
T 4a82_A 161 VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH 240 (578)
T ss_dssp TTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998249999981664999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999988999999999999999999999982464787999999999999999998579899999999999999997345
Q 001438 282 GLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIER 361 (1077)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~a~~~~~ri~~~l~~ 361 (1077)
....+...++..++..+..+++++++++++..+.+++|.+++++.+......|+..++..+..+.++..+.+|++++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 320 (578)
T 4a82_A 241 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDE 320 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985995899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 85665566667777887641899868998599999642000038852996999983999958999999960467984179
Q 001438 362 DTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEI 441 (1077)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~~~i~~g~~~~ivG~~GsGKStl~~~l~~~~~~~~G~i 441 (1077)
+++.++.. .....+...+.++++|++|+|++. +.++|+|+||++++||+++|+||||||||||+++|.|+++|++|+|
T Consensus 321 ~~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i 398 (578)
T 4a82_A 321 DYDIKNGV-GAQPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQI 398 (578)
T ss_dssp CCSSCCCT-TCCCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEE
T ss_pred CCCCCCCC-CCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
T ss_conf 97666787-766667778807999999975899-9741343379987999999989999859999999846788999679
Q ss_pred EECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCC
Q ss_conf 99995279999788742046880678764001899985399999999999999997099988418521010202999999
Q 001438 442 LLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQL 521 (1077)
Q Consensus 442 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ig~~g~~l 521 (1077)
.+||+|+.+++.+++|++++||+|+|++|++|++|||.+|.++.+++++.++|+.++++++++.+|+|++|.+|++|.+|
T Consensus 399 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~L 478 (578)
T 4a82_A 399 LIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKL 478 (578)
T ss_dssp EETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTS
T ss_pred EECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCC
T ss_conf 99999844278999960068992898347645999985279998899999999880959999757330102530688967
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECC
Q ss_conf 94899999999985139989998276889998989999999998707973999825923675039899997988999629
Q 001438 522 SGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGS 601 (1077)
Q Consensus 522 SgGqkqri~lARal~~~~~illlDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~itH~~~~~~~~d~i~~l~~G~i~~~g~ 601 (1077)
|||||||++||||++++|++++||||||+||+++++.+.+.+.+..+++|+|+||||++.+..||+|++|++|+++++|+
T Consensus 479 SgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 558 (578)
T 4a82_A 479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGT 558 (578)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECC
T ss_conf 99999999999999749999999786545799999999999999808997999831789997199899998998999888
Q ss_pred HHHHHCCCCCHHHHHHHHH
Q ss_conf 4688509993689999999
Q 001438 602 HEELISNPNSAYAALVQLQ 620 (1077)
Q Consensus 602 ~~~l~~~~~~~~~~l~~~~ 620 (1077)
|+|++++ ++.|.++++.|
T Consensus 559 ~~el~~~-~~~~~~~~~~q 576 (578)
T 4a82_A 559 HRELIAK-QGAYEHLYSIQ 576 (578)
T ss_dssp HHHHHHT-TSHHHHHHTTT
T ss_pred HHHHHHC-CCHHHHHHHHH
T ss_conf 9999858-83899999850
No 8
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=686.29 Aligned_cols=574 Identities=37% Similarity=0.540 Sum_probs=487.7
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999833246699999999999998967989999999999997101588213445899999999999999999999999
Q 001438 43 LFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEV 122 (1077)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (1077)
+.+++++..++++ .+.++.++.++.++..+..+++++.++|........ .....+..+...++++.++..++.+++.
T Consensus 7 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (595)
T 2yl4_A 7 ARKLLGLAYPERR-RLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTV--DYSDNLTRLCLGLSAVFLCGAAANAIRV 83 (595)
T ss_dssp HHHHHHHHGGGHH-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTS--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999887899-999999999999999999999999999999735740--2667999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999199011205889228999999679999999989999999999999999999999989
Q 001438 123 SCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVW 202 (1077)
Q Consensus 123 ~~~~~~~~~~~~~lr~~~~~~il~~~~~~~~~~~~~G~i~s~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (1077)
++..+.+.++..++|..++++++++|..+|++. ++|++++++++|++.+++.+...+..++..+..+++.+++++.++|
T Consensus 84 ~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 162 (595)
T 2yl4_A 84 YLMQTSGQRIVNRLRTSLFSSILRQEVAFFDKT-RTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSP 162 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHS-CHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999981999997779-8488999999999999999999999999999999999999999819
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999991199999962099999999999999999999999
Q 001438 203 QISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAG 282 (1077)
Q Consensus 203 ~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 282 (1077)
.+++++++.+|++.++...+.+...+..++.++...+..+.+.|.++|+++||+|++|+.+.+++.+..++..+...+..
T Consensus 163 ~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 242 (595)
T 2yl4_A 163 NLATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEA 242 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999981199999837569999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999889999999999999999999999824647879999999999999999985798999999999999999973458
Q 001438 283 LAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERD 362 (1077)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~a~~~~~ri~~~l~~~ 362 (1077)
...+...+...++..+..+.++++|++++..+.+++|.+++++.+......|+..+...+..+.++..+.+|++++++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~ 322 (595)
T 2yl4_A 243 FARAGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLERE 322 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999869978999999999999999999999999999999999999999998389
Q ss_pred CCCCCCCCCCCCCCCCCCC-EEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 5665566667777887641-899868998599999642000038852996999983999958999999960467984179
Q 001438 363 TMSKASSKTGRKLDKLSGH-IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEI 441 (1077)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~-i~~~~v~f~y~~~~~~~~l~~~~~~i~~g~~~~ivG~~GsGKStl~~~l~~~~~~~~G~i 441 (1077)
++.+... .....++..+. |+++|++|+|+++++.++|+|+||++++||+++|+||||||||||+++|.|+++|++|+|
T Consensus 323 ~~~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i 401 (595)
T 2yl4_A 323 PKLPFNE-GVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTI 401 (595)
T ss_dssp CSSCSSC-SBCCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEE
T ss_pred CCCCCCC-CCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
T ss_conf 7667777-877776789983899988998589988812011279984998899989999979999999825857898379
Q ss_pred EECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCC---CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
Q ss_conf 9999527999978874204688067876400189998539999---9999999999997099988418521010202999
Q 001438 442 LLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDD---ATMEEITRAAKLSEAMSFISNLPERFETQVGERG 518 (1077)
Q Consensus 442 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ig~~g 518 (1077)
.+||+|+.+++..++|++++||+|+|++|++|++|||.++.+. .+++++.++++.++++++++.+|+|++|.+|++|
T Consensus 402 ~~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~ 481 (595)
T 2yl4_A 402 SLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKG 481 (595)
T ss_dssp EETTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSS
T ss_pred EECCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCC
T ss_conf 99999811179999973228983688326877999984058776656899999999986979999747320135016887
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCEEEEEECCEEEE
Q ss_conf 99994899999999985139989998276889998989999999998707973999825923675039899997988999
Q 001438 519 IQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVK 598 (1077)
Q Consensus 519 ~~lSgGqkqri~lARal~~~~~illlDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~itH~~~~~~~~d~i~~l~~G~i~~ 598 (1077)
.+||||||||++||||++++|++++||||||+||+++++.+.+.+.+..+++|+|+||||++.+..||+|++|++|++++
T Consensus 482 ~~LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~ 561 (595)
T 2yl4_A 482 VLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITE 561 (595)
T ss_dssp CCCCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEE
T ss_conf 86899999999999999759999999886668998999999999999965997999946878997599899998998999
Q ss_pred ECCHHHHHCCCCCHHHHHHHHHH
Q ss_conf 62946885099936899999999
Q 001438 599 TGSHEELISNPNSAYAALVQLQE 621 (1077)
Q Consensus 599 ~g~~~~l~~~~~~~~~~l~~~~~ 621 (1077)
+|+|+|+++++++.|.++++.|.
T Consensus 562 ~g~~~~l~~~~~~~~~~~~~~q~ 584 (595)
T 2yl4_A 562 YGKHEELLSKPNGIYRKLMNKQS 584 (595)
T ss_dssp EECSCC------C----------
T ss_pred ECCHHHHHHCCCHHHHHHHHHHH
T ss_conf 78899997478729999999743
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=682.65 Aligned_cols=567 Identities=28% Similarity=0.433 Sum_probs=490.9
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999833246699999999999998967989999999999997101588213445899999999999999999999999
Q 001438 43 LFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEV 122 (1077)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (1077)
+.+++++..+++ ..+.++.++.++.++..+..+++++.++|...... + ..........++++.++..++.++..
T Consensus 13 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (582)
T 3b5x_A 13 FKRLWTYIRLYK-AGLVVSTIALVINAAADTYMISLLKPLLDEGFGNA-E----SNFLRILPFMILGLMFVRGLSGFASS 86 (582)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-C----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999988999-99999999999999999999999999999986468-6----67999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999199011205889228999999679999999989999999999999999999999989
Q 001438 123 SCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVW 202 (1077)
Q Consensus 123 ~~~~~~~~~~~~~lr~~~~~~il~~~~~~~~~~~~~G~i~s~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (1077)
++..+.+.++..++|..++++++++|+.+|++ .++|++++++++|++.+++.+...+..++..+..+++.+++++.++|
T Consensus 87 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~-~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 165 (582)
T 3b5x_A 87 YCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQ-ESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSW 165 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999998699999778-98789999999889999999999999999999999999999999829
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999991199999962099999999999999999999999
Q 001438 203 QISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAG 282 (1077)
Q Consensus 203 ~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 282 (1077)
.++++.++.+|+..++...+.+...+..++.++...+..+.+.|.++|+++||+|++|+.+.+++.+..++..+...+..
T Consensus 166 ~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 245 (582)
T 3b5x_A 166 QLSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLV 245 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999995199999708759999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999889999999999999999999999824647879999999999999999985798999999999999999973458
Q 001438 283 LAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERD 362 (1077)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~a~~~~~ri~~~l~~~ 362 (1077)
...+.......++..+..+++++++++.+..+.++.|.+++++.+......|+..+...+..+.++..+.+|+.++++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~ 325 (582)
T 3b5x_A 246 SAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLE 325 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999859988999999999999999999999999999999999999999997589
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 56655666677778876418998689985999996420000388529969999839999589999999604679841799
Q 001438 363 TMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEIL 442 (1077)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~~~i~~g~~~~ivG~~GsGKStl~~~l~~~~~~~~G~i~ 442 (1077)
++.+. .....++..+.++++|++|+|++. +.++|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.
T Consensus 326 ~~~~~---~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~ 401 (582)
T 3b5x_A 326 TERDN---GKYEAERVNGEVDVKDVTFTYQGK-EKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSIC 401 (582)
T ss_pred CCCCC---CCCCCCCCCCEEEEEEEEEECCCC-CCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf 76777---777777788828999989972899-86540041699879998999899999799999999657789998798
Q ss_pred ECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCC
Q ss_conf 9995279999788742046880678764001899985399-999999999999997099988418521010202999999
Q 001438 443 LDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGK-DDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQL 521 (1077)
Q Consensus 443 ~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ig~~g~~l 521 (1077)
+||+|+.+++..++|++++||+|+|++|++|++|||.++. ++.+++++.++++.++++++++.+|+|++|.+|++|.+|
T Consensus 402 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~L 481 (582)
T 3b5x_A 402 LDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSL 481 (582)
T ss_pred ECCEEHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCC
T ss_conf 99998563889999648589827990531029999856688999999999999987989999847653345106888847
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECC
Q ss_conf 94899999999985139989998276889998989999999998707973999825923675039899997988999629
Q 001438 522 SGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGS 601 (1077)
Q Consensus 522 SgGqkqri~lARal~~~~~illlDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~itH~~~~~~~~d~i~~l~~G~i~~~g~ 601 (1077)
|||||||++||||++++|++++||||||+||+++++.+.+.+.+..+++|+|+|||+++.+..||+|++|++|+++++|+
T Consensus 482 SgGq~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 561 (582)
T 3b5x_A 482 SGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGR 561 (582)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 99999999999999749999999785446899999999999999728998999936889998199899998998999778
Q ss_pred HHHHHCCCCCHHHHHHHHHH
Q ss_conf 46885099936899999999
Q 001438 602 HEELISNPNSAYAALVQLQE 621 (1077)
Q Consensus 602 ~~~l~~~~~~~~~~l~~~~~ 621 (1077)
|+|++++ ++.|.++++.|.
T Consensus 562 ~~~l~~~-~~~~~~~~~~q~ 580 (582)
T 3b5x_A 562 HADLLAQ-DGAYAQLHRIQF 580 (582)
T ss_pred HHHHHHC-CCHHHHHHHHHH
T ss_conf 9999848-858999999861
No 10
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=681.67 Aligned_cols=566 Identities=30% Similarity=0.464 Sum_probs=488.0
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999833246699999999999998967989999999999997101588213445899999999999999999999999
Q 001438 43 LFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEV 122 (1077)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (1077)
+.+++++..+++ ..+.++.++.++.++..+..+++++.++|..... . . ..........++++.++..++.++..
T Consensus 13 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~---~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (582)
T 3b60_A 13 FRRLWPTIAPFK-AGLIVAGIALILNAASDTFMLSLLKPLLDDGFGK---T-D-RSVLLWMPLVVIGLMILRGITSYISS 86 (582)
T ss_dssp HHHHHHHHGGGH-HHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTS---T-T-HHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---C-C-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999-9999999999999999999999999999988436---8-6-57999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999199011205889228999999679999999989999999999999999999999989
Q 001438 123 SCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVW 202 (1077)
Q Consensus 123 ~~~~~~~~~~~~~lr~~~~~~il~~~~~~~~~~~~~G~i~s~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (1077)
+...+.+.++..++|..++++++++|..+|++. ++|++++|+++|++.+++.+...+..++..+..+++.+++++.++|
T Consensus 87 ~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 165 (582)
T 3b60_A 87 YCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQ-STGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSW 165 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCSTHHHHS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999980999997889-8658999999879999999999999999999999999999999809
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999991199999962099999999999999999999999
Q 001438 203 QISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAG 282 (1077)
Q Consensus 203 ~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 282 (1077)
.++++.++.+|+..++...+.+...+..++.++...+..+.+.|.++|+++||+|++|+.+.+++.+..++..+...+..
T Consensus 166 ~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 245 (582)
T 3b60_A 166 QLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMV 245 (582)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999996199999837689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999889999999999999999999999824647879999999999999999985798999999999999999973458
Q 001438 283 LAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERD 362 (1077)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~a~~~~~ri~~~l~~~ 362 (1077)
...++..+...++..+..+++++++++.+..+.++.|.+++++.+......|+..+...+..+.++..+.+|+.++++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~ 325 (582)
T 3b60_A 246 SASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSE 325 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999849998999999999999999999999999999999999999999997599
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 56655666677778876418998689985999996420000388529969999839999589999999604679841799
Q 001438 363 TMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEIL 442 (1077)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~~~i~~g~~~~ivG~~GsGKStl~~~l~~~~~~~~G~i~ 442 (1077)
++.+. .....++..+.|+++|++|+|++. +.++|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.
T Consensus 326 ~~~~~---~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~ 401 (582)
T 3b60_A 326 QEKDE---GKRVIDRATGDLEFRNVTFTYPGR-EVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHIL 401 (582)
T ss_dssp CSCCC---CCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEE
T ss_pred CCCCC---CCCCCCCCCCCEEEEEEEEECCCC-CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEE
T ss_conf 87667---777777888847999889973999-97441561599769998999899999899999998610689897697
Q ss_pred ECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCC
Q ss_conf 9995279999788742046880678764001899985399-999999999999997099988418521010202999999
Q 001438 443 LDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGK-DDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQL 521 (1077)
Q Consensus 443 ~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ig~~g~~l 521 (1077)
+||+|+.+++..++|++++||+|+|++|++|++|||.++. ++.+++++.++++.++++++++.+|+|++|.+|++|.+|
T Consensus 402 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~L 481 (582)
T 3b60_A 402 MDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLL 481 (582)
T ss_dssp ETTEETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSS
T ss_pred ECCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99998230699999960808806874778789999854599998999999999984979999845041145114798878
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECC
Q ss_conf 94899999999985139989998276889998989999999998707973999825923675039899997988999629
Q 001438 522 SGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGS 601 (1077)
Q Consensus 522 SgGqkqri~lARal~~~~~illlDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~itH~~~~~~~~d~i~~l~~G~i~~~g~ 601 (1077)
|||||||++||||++++|++++||||||+||+++++.+.+.+.+..+++|+|+||||++.+..||+|++|++|+++++|+
T Consensus 482 SgGq~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 561 (582)
T 3b60_A 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGT 561 (582)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 99999999999999728998999786555798999999999999967997999945477898599899997888988458
Q ss_pred HHHHHCCCCCHHHHHHHHH
Q ss_conf 4688509993689999999
Q 001438 602 HEELISNPNSAYAALVQLQ 620 (1077)
Q Consensus 602 ~~~l~~~~~~~~~~l~~~~ 620 (1077)
|+|++++ ++.|+++++.|
T Consensus 562 ~~~l~~~-~~~~~~~~~~q 579 (582)
T 3b60_A 562 HSELLAQ-HGVYAQLHKMQ 579 (582)
T ss_dssp HHHHHHH-TSSHHHHHHHT
T ss_pred HHHHHHC-CCHHHHHHHHH
T ss_conf 9999876-98899999975
Done!