Query 001439
Match_columns 1077
No_of_seqs 594 out of 5385
Neff 10.0
Searched_HMMs 13730
Date Tue Mar 26 16:23:14 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001439.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_741-745//hhsearch_scop/001439hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 0 0 273.6 18.4 297 25-423 1-303 (313)
2 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 1.4E-45 0 247.3 17.4 258 660-997 51-312 (313)
3 d2omza2 c.10.2.1 (A:33-416) In 100.0 1.1E-38 7.7E-43 211.5 33.8 76 881-962 308-383 (384)
4 d2omza2 c.10.2.1 (A:33-416) In 100.0 3.3E-37 2.4E-41 203.8 31.8 16 902-917 349-364 (384)
5 d1xkua_ c.10.2.7 (A:) Decorin 100.0 3.4E-35 2.5E-39 193.5 29.8 268 588-965 12-285 (305)
6 d1xkua_ c.10.2.7 (A:) Decorin 100.0 5.6E-34 4.1E-38 187.2 28.6 66 750-816 190-255 (305)
7 d1ozna_ c.10.2.7 (A:) Reticulo 100.0 1.2E-35 9E-40 195.7 19.6 68 899-966 172-239 (284)
8 d1ozna_ c.10.2.7 (A:) Reticulo 100.0 9.8E-34 7.1E-38 186.0 19.1 67 750-816 172-238 (284)
9 d1p9ag_ c.10.2.7 (G:) von Will 100.0 2.9E-32 2.1E-36 178.4 19.8 163 750-969 50-212 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 100.0 2.7E-31 1.9E-35 173.4 21.0 110 882-992 102-211 (266)
11 d1jl5a_ c.10.2.6 (A:) Leucine 100.0 6.3E-25 4.6E-29 140.6 34.0 55 903-965 283-337 (353)
12 d1jl5a_ c.10.2.6 (A:) Leucine 100.0 1.9E-24 1.4E-28 138.2 33.0 69 879-959 283-351 (353)
13 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.9 4.3E-30 3.2E-34 167.2 0.7 114 102-218 3-125 (460)
14 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.9 3.8E-28 2.7E-32 157.2 8.1 114 130-243 3-125 (460)
15 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.9 9.1E-25 6.6E-29 139.8 16.0 79 881-960 154-233 (242)
16 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.9 2.3E-25 1.7E-29 142.9 12.7 180 757-996 10-190 (192)
17 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.9 2.2E-24 1.6E-28 137.8 13.5 53 885-937 182-234 (242)
18 d1h6ua2 c.10.2.1 (A:36-262) In 99.9 1.3E-23 9.5E-28 133.8 17.1 74 881-960 152-225 (227)
19 d1h6ua2 c.10.2.1 (A:36-262) In 99.9 4.8E-24 3.5E-28 136.1 14.0 18 900-917 191-208 (227)
20 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.9 1.2E-23 9E-28 134.0 12.1 85 882-966 56-140 (192)
21 d2astb2 c.10.1.3 (B:2136-2419) 99.9 4.5E-23 3.3E-27 131.1 14.4 60 334-396 174-235 (284)
22 d1h6ta2 c.10.2.1 (A:31-240) In 99.9 6.5E-22 4.7E-26 125.1 16.1 74 881-960 135-208 (210)
23 d2astb2 c.10.1.3 (B:2136-2419) 99.9 2.5E-23 1.8E-27 132.4 8.8 13 360-372 223-235 (284)
24 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.9 3.4E-21 2.5E-25 121.4 13.2 93 125-217 27-133 (344)
25 d1h6ta2 c.10.2.1 (A:31-240) In 99.9 2.2E-20 1.6E-24 117.2 17.2 34 900-935 174-207 (210)
26 d2omxa2 c.10.2.1 (A:37-235) In 99.9 2.6E-20 1.9E-24 116.8 16.9 17 925-941 169-185 (199)
27 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.8 1.7E-20 1.3E-24 117.8 11.9 100 96-195 26-135 (344)
28 d1a9na_ c.10.2.4 (A:) Spliceso 99.7 3.6E-18 2.6E-22 105.9 10.0 112 125-243 14-125 (162)
29 d1a9na_ c.10.2.4 (A:) Spliceso 99.7 3.4E-18 2.4E-22 106.0 8.2 14 927-940 111-124 (162)
30 d2ifga3 c.10.2.7 (A:36-191) Hi 99.7 3.4E-17 2.5E-21 100.8 10.4 87 881-968 32-119 (156)
31 d1dcea3 c.10.2.2 (A:444-567) R 99.7 2.6E-16 1.9E-20 96.3 11.1 80 883-965 23-103 (124)
32 d1dcea3 c.10.2.2 (A:444-567) R 99.7 5.2E-16 3.8E-20 94.7 12.4 14 227-240 87-100 (124)
33 d1m9la_ c.10.3.1 (A:) Outer ar 99.6 2.5E-18 1.8E-22 106.7 -3.2 107 125-240 44-150 (198)
34 d1m9la_ c.10.3.1 (A:) Outer ar 99.6 2.5E-17 1.8E-21 101.5 0.5 112 144-265 39-150 (198)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 99.6 4.9E-15 3.6E-19 89.7 10.4 111 882-994 10-121 (156)
36 d1pgva_ c.10.1.1 (A:) Tropomod 99.0 7E-10 5.1E-14 63.2 9.2 45 151-195 42-86 (167)
37 d1pgva_ c.10.1.1 (A:) Tropomod 98.9 7.3E-09 5.3E-13 57.9 9.1 118 98-215 12-141 (167)
38 d1koha1 c.10.2.3 (A:201-362) m 98.8 5E-10 3.7E-14 63.9 2.7 125 101-236 22-152 (162)
39 d1io0a_ c.10.1.1 (A:) Tropomod 98.8 7.5E-09 5.5E-13 57.9 7.8 43 101-143 17-60 (166)
40 d1io0a_ c.10.1.1 (A:) Tropomod 98.5 1E-07 7.6E-12 52.0 6.5 88 125-212 13-109 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00 E-value=0 Score=273.61 Aligned_cols=297 Identities=28% Similarity=0.411 Sum_probs=169.8
Q ss_pred CCCCHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCC--CCCCEEECCCC--CCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 44748999999820000038877656887899998875--64411746998--946999827766676322343325668
Q 001439 25 EGCLNHERFALLQLKLFFIDPYNYLLDWVDDEGATDCC--QWERVSCNNTM--GRVVVLDLSQTHRGEYWYLNASLFTPF 100 (1077)
Q Consensus 25 ~~~~~~~~~all~~k~~~~~~~~~~~~w~~~~~~~~~c--~w~gv~c~~~~--~~v~~l~l~~~~~~~~~~~~~~~~~~l 100 (1077)
..|+++||+||++||+++.+|. .+++|.. + +||| .|+||+|+... +||+.++|++....+...+. ..
T Consensus 1 ~~c~~~e~~aLl~~k~~~~~~~-~l~sW~~-~--~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp-~~---- 71 (313)
T d1ogqa_ 1 ELCNPQDKQALLQIKKDLGNPT-TLSSWLP-T--TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIP-SS---- 71 (313)
T ss_dssp CCSCHHHHHHHHHHHHHTTCCG-GGTTCCT-T--SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECC-GG----
T ss_pred CCCCHHHHHHHHHHHHHCCCCC-CCCCCCC-C--CCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCC-HH----
T ss_conf 9989899999999999779998-6778899-9--999889488969748999479889989899888888798-47----
Q ss_pred CCCCEEECCCCCCCCCCCCHHHHHCCCCCCCCEEECCC-CCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHCCC
Q ss_conf 67767648999888641001333203899986995899-97980136875226998888489996888658751011049
Q 001439 101 QQLESLDLRDNDIAGCVENEGLERLSRLSNLKMLNLVG-NLFNNSILSSLARLSSLTSLDLSANRLKGSIDIKGPKRLSR 179 (1077)
Q Consensus 101 ~~L~~L~L~~n~~~~~~~~~~~~~l~~l~~L~~L~Ls~-n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~ 179 (1077)
++++++|++|+|++ |.+.+.+|..++++++|++|++++|++.+..+ ..+..
T Consensus 72 ------------------------l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~----~~~~~ 123 (313)
T d1ogqa_ 72 ------------------------LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP----DFLSQ 123 (313)
T ss_dssp ------------------------GGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECC----GGGGG
T ss_pred ------------------------HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC----CCCCC
T ss_conf ------------------------84675335202026543330024311454200110203564344332----22220
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCCC-CEEECCCCCCCCCCHHHHCCCCCCCC
Q ss_conf 99986997899878951047542067885787578878897574433002666-26506778679874021103775665
Q 001439 180 LNNLKVFDLSGNLFNNSILSSLARLSSLRSLLLYDNRLEGSIDVKEFDSLSNL-EELDMSYNEIDNFEVPQACSGLRKLS 258 (1077)
Q Consensus 180 l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L-~~L~Ls~n~l~~~~~~~~~~~l~~L~ 258 (1077)
+.+|++++++.|.+...+|..+.+++.|+.+++++|.+.+.++ ..+..+.++ +.++++.|+++... +..+..+.
T Consensus 124 ~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip-~~~~~l~~l~~~l~~~~n~l~~~~-~~~~~~l~--- 198 (313)
T d1ogqa_ 124 IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP-DSYGSFSKLFTSMTISRNRLTGKI-PPTFANLN--- 198 (313)
T ss_dssp CTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECC-GGGGCCCTTCCEEECCSSEEEEEC-CGGGGGCC---
T ss_pred HHHHCCCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCC---
T ss_conf 1110011112245555685122067400000023553356203-121443112323102246435332-43322222---
Q ss_pred EEEECCCCCCCCCHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 44301345678402334208999854650446755455333356776676543771401475520316899730189975
Q 001439 259 YLHLLRVGIRDGSKLLQSMGSFPSLNTLDLSYNNFTETVTTTTQGFPHFKSLKELYMDDARIALNTSFLQIIGESMPSIQ 338 (1077)
Q Consensus 259 ~L~l~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~l~~~l~~L~ 338 (1077)
...+++. .+ ...+..+..... ++.++
T Consensus 199 ------------------------~~~l~l~---------------------------~~--~~~~~~~~~~~~-~~~l~ 224 (313)
T d1ogqa_ 199 ------------------------LAFVDLS---------------------------RN--MLEGDASVLFGS-DKNTQ 224 (313)
T ss_dssp ------------------------CSEEECC---------------------------SS--EEEECCGGGCCT-TSCCS
T ss_pred ------------------------CCCCCCC---------------------------CC--CCCCCCCCCCCC-CCCCC
T ss_conf ------------------------2233333---------------------------34--332222222222-22211
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 77234575888854555565588774679835875789740311079987499367974543237863337787655642
Q 001439 339 YLSLSNSSVSNNSRTLDQGLCPLVHLQELHMADNDLRGSLPWCLANMTSLRILDVSSNQLIGSISSSPLIHLTSIEDLIL 418 (1077)
Q Consensus 339 ~L~L~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~i~~~~~~~l~~L~~L~L 418 (1077)
.+++.++.+.+..+ .+..+++|+.|++++|.+++.+|..++++++|++|++++|+++|.+| .+.++++|+.+++
T Consensus 225 ~l~~~~~~l~~~~~----~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP--~~~~L~~L~~l~l 298 (313)
T d1ogqa_ 225 KIHLAKNSLAFDLG----KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP--QGGNLQRFDVSAY 298 (313)
T ss_dssp EEECCSSEECCBGG----GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC--CSTTGGGSCGGGT
T ss_pred CCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCEECCCCCHHHHCCCCCCEEECCCCCCCCCCC--CCCCCCCCCHHHH
T ss_conf 12222222222222----22245544444476570666087688479999989795883516689--8666799897886
Q ss_pred CCCEE
Q ss_conf 88732
Q 001439 419 SDNHF 423 (1077)
Q Consensus 419 ~~n~l 423 (1077)
.+|+.
T Consensus 299 ~~N~~ 303 (313)
T d1ogqa_ 299 ANNKC 303 (313)
T ss_dssp CSSSE
T ss_pred CCCCC
T ss_conf 88950
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00 E-value=1.4e-45 Score=247.29 Aligned_cols=258 Identities=33% Similarity=0.558 Sum_probs=210.7
Q ss_pred CCCEEECCCCCCCC--CCCCCCCCCCCCCEEECCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 99689841685888--8984435878765898778-81247897012589887799424774776799988876325898
Q 001439 660 SLQGLFLSNNSLSG--KIPRWLGNLTVLRHIIMPK-NHIEGPIPLEFCQLRILQILDISDNNISGSLPSCYDFVCIEQVH 736 (1077)
Q Consensus 660 ~L~~L~l~~n~l~~--~~p~~l~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~L~~L~ 736 (1077)
.++.|+++++.+.+ .+|..++++++|++|++++ |.+.|.+|..+.++++|++|++++|.+.+..
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~------------- 117 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAI------------- 117 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEEC-------------
T ss_pred EEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC-------------
T ss_conf 9889989899888888798478467533520202654333002431145420011020356434433-------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCCC-CEEECCCCCC
Q ss_conf 058735432585630254355275036665888899322499888889844751654583100499999-8997868847
Q 001439 737 LSKNMLHGQLKEGTFFNCLTLMILDLSYNHLNGNIPDRVDGLSQLSYLILAHNNLEGEVPIQLCRLNQL-QLLDLSNNNL 815 (1077)
Q Consensus 737 l~~n~~~~~i~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-~~L~Ls~N~l 815 (1077)
+. .+..+..|+.+++++|.+.+.+|..+..++.++.+++++|.+.+.+|..+..+..+ +.+++++|++
T Consensus 118 ----------~~-~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l 186 (313)
T d1ogqa_ 118 ----------PD-FLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186 (313)
T ss_dssp ----------CG-GGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEE
T ss_pred ----------CC-CCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf ----------22-2220111001111224555568512206740000002355335620312144311232310224643
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCEEECCCCCCCCC
Q ss_conf 87789551257521113689999876531233188767942233220010036511001367578786487778957898
Q 001439 816 HGHIPSCFDNTTLHERYNNGSSLQPFETSFVIMGGMDVDPKKQILESFDFTTKSITYTYQGRVPSLLSGLDLSCNRLIGH 895 (1077)
Q Consensus 816 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~ 895 (1077)
++..|..+.++. ...++++++...+.
T Consensus 187 ~~~~~~~~~~l~------------------------------------------------------~~~l~l~~~~~~~~ 212 (313)
T d1ogqa_ 187 TGKIPPTFANLN------------------------------------------------------LAFVDLSRNMLEGD 212 (313)
T ss_dssp EEECCGGGGGCC------------------------------------------------------CSEEECCSSEEEEC
T ss_pred CCCCCCCCCCCC------------------------------------------------------CCCCCCCCCCCCCC
T ss_conf 533243322222------------------------------------------------------22333333433222
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
Q ss_conf 94132364558656586886998897255698879867688871754388762279976668722462633488310013
Q 001439 896 IPPQIGNLTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSVAYNNLSGKIPERAAQF 975 (1077)
Q Consensus 896 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~ 975 (1077)
+|..+..+++++.+++++|.+++.+| .++.+++|+.|+|++|+++|.+|..+..+++|++|++++|+++|.+|+ +..+
T Consensus 213 ~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L 290 (313)
T d1ogqa_ 213 ASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNL 290 (313)
T ss_dssp CGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCEECCCCCHHHHCCCCCCEEECCCCCCCCCCCC-CCCC
T ss_conf 22222222221112222222222222-222455444444765706660876884799999897958835166898-6667
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7777444567878979999899
Q 001439 976 ATFNESSYEGNPFLCGPPLPIC 997 (1077)
Q Consensus 976 ~~~~~~~~~~N~~~C~~~~~~~ 997 (1077)
..++.+++.||+.+||.|++.|
T Consensus 291 ~~L~~l~l~~N~~l~g~plp~c 312 (313)
T d1ogqa_ 291 QRFDVSAYANNKCLCGSPLPAC 312 (313)
T ss_dssp GGSCGGGTCSSSEEESTTSSCC
T ss_pred CCCCHHHHCCCCCCCCCCCCCC
T ss_conf 9989788688950019898898
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=100.00 E-value=1.1e-38 Score=211.54 Aligned_cols=76 Identities=26% Similarity=0.364 Sum_probs=38.2
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 78648777895789894132364558656586886998897255698879867688871754388762279976668722
Q 001439 881 LLSGLDLSCNRLIGHIPPQIGNLTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSVA 960 (1077)
Q Consensus 881 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls 960 (1077)
.++.|++++|++++.. .+..+++|+.|++++|++++ ++ .++++++|+.|++++|++++.+| +.++++|+.|+++
T Consensus 308 ~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~ 381 (384)
T d2omza2 308 NLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 381 (384)
T ss_dssp TCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECC
T ss_pred CCCEEECCCCCCCCCC--CCCCCCCCCEEECCCCCCCC-CH-HHCCCCCCCEEECCCCCCCCCHH--HCCCCCCCEEECC
T ss_conf 4676777788778984--53668988989898998999-74-67089999989897995899800--0039999996397
Q ss_pred CC
Q ss_conf 46
Q 001439 961 YN 962 (1077)
Q Consensus 961 ~N 962 (1077)
+|
T Consensus 382 ~N 383 (384)
T d2omza2 382 DQ 383 (384)
T ss_dssp CE
T ss_pred CC
T ss_conf 89
No 4
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=100.00 E-value=3.3e-37 Score=203.83 Aligned_cols=16 Identities=44% Similarity=0.642 Sum_probs=5.3
Q ss_pred CCCCCCEEECCCCCCC
Q ss_conf 6455865658688699
Q 001439 902 NLTKIQTLNLSHNNLA 917 (1077)
Q Consensus 902 ~l~~L~~L~Ls~N~l~ 917 (1077)
++++|+.|++++|+++
T Consensus 349 ~l~~L~~L~l~~N~l~ 364 (384)
T d2omza2 349 NLTNINWLSAGHNQIS 364 (384)
T ss_dssp GCTTCCEEECCSSCCC
T ss_pred CCCCCCEEECCCCCCC
T ss_conf 8999998989799589
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=3.4e-35 Score=193.48 Aligned_cols=268 Identities=22% Similarity=0.285 Sum_probs=128.4
Q ss_pred CCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 98998468858887406765169757599932664787465246587766714345842345699466699999689841
Q 001439 588 LQFLDLSNNQLTGEIPEHLAMGCVSLRSLALSNNNLEGHMFSRNFNLTNLIWLQLEGNHFVGEIPQSLSKCSSLQGLFLS 667 (1077)
Q Consensus 588 L~~L~L~~n~l~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 667 (1077)
.+.++-++..++ .+|..++ +.+++|++++|+++...+..|.++++|++|++++|.+....|..|.+++.|+.|+++
T Consensus 12 ~~~~~C~~~~L~-~lP~~l~---~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 12 LRVVQCSDLGLE-KVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp TTEEECTTSCCC-SCCCSCC---TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEECCCCCC-CCCCCCC---CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECCC
T ss_conf 999985599988-5198889---997989784991898696576046565231123443445235665279855783156
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 68588889844358787658987788124789701258988779942477477679998887632589805873543258
Q 001439 668 NNSLSGKIPRWLGNLTVLRHIIMPKNHIEGPIPLEFCQLRILQILDISDNNISGSLPSCYDFVCIEQVHLSKNMLHGQLK 747 (1077)
Q Consensus 668 ~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~L~~L~l~~n~~~~~i~ 747 (1077)
+|++. .+|..+ ...+..|.+..|.+.+..+..+.....+..++...|..... ...
T Consensus 88 ~n~l~-~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~----------------------~~~ 142 (305)
T d1xkua_ 88 KNQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS----------------------GIE 142 (305)
T ss_dssp SSCCS-BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGG----------------------GBC
T ss_pred CCCCC-CCCCCH--HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC----------------------CCC
T ss_conf 87567-676400--11132321024610234444540133110000123333346----------------------777
Q ss_pred CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 56302543552750366658888993224998888898447516545831004999998997868847877895512575
Q 001439 748 EGTFFNCLTLMILDLSYNHLNGNIPDRVDGLSQLSYLILAHNNLEGEVPIQLCRLNQLQLLDLSNNNLHGHIPSCFDNTT 827 (1077)
Q Consensus 748 ~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 827 (1077)
...|..+++|+.+++++|.+.. +|..+ +++|+.|++++|...+..+..+..++.++.|++++|.+.
T Consensus 143 ~~~~~~l~~L~~l~l~~n~l~~-l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~----------- 208 (305)
T d1xkua_ 143 NGAFQGMKKLSYIRIADTNITT-IPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS----------- 208 (305)
T ss_dssp TTGGGGCTTCCEEECCSSCCCS-CCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC-----------
T ss_pred CCCCCCCCCCCCCCCCCCCCCC-CCCCC--CCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC-----------
T ss_conf 6422345656712034677451-67101--776678989788677888267641341330154455332-----------
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 21113689999876531233188767942233220010036511001367578786487778957898941323645586
Q 001439 828 LHERYNNGSSLQPFETSFVIMGGMDVDPKKQILESFDFTTKSITYTYQGRVPSLLSGLDLSCNRLIGHIPPQIGNLTKIQ 907 (1077)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 907 (1077)
+..+..+.++++|+
T Consensus 209 ------------------------------------------------------------------~~~~~~~~~l~~L~ 222 (305)
T d1xkua_ 209 ------------------------------------------------------------------AVDNGSLANTPHLR 222 (305)
T ss_dssp ------------------------------------------------------------------EECTTTGGGSTTCC
T ss_pred ------------------------------------------------------------------CCCCCCCCCCCCCE
T ss_conf ------------------------------------------------------------------22345433443322
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC------CCCCCCCCEEECCCCCCC
Q ss_conf 5658688699889725569887986768887175438876------227997666872246263
Q 001439 908 TLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQ------LVELNTLAVFSVAYNNLS 965 (1077)
Q Consensus 908 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~------l~~l~~L~~l~ls~N~l~ 965 (1077)
+|+|++|.++ .+|..|..+++|+.|+|++|+|+...... ...+.+|+.+++++|++.
T Consensus 223 ~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 223 ELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp EEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred EEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCHHCCCCCCCEEECCCCCCC
T ss_conf 4302554002-46311033467898989898657638100267210021588897889899576
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=5.6e-34 Score=187.21 Aligned_cols=66 Identities=27% Similarity=0.319 Sum_probs=26.0
Q ss_pred CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCCCCEEECCCCCCC
Q ss_conf 3025435527503666588889932249988888984475165458310049999989978688478
Q 001439 750 TFFNCLTLMILDLSYNHLNGNIPDRVDGLSQLSYLILAHNNLEGEVPIQLCRLNQLQLLDLSNNNLH 816 (1077)
Q Consensus 750 ~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 816 (1077)
.|.+++.++.|++++|.+++..+..+.++++|++|++++|+++ .+|.++..+++|+.|++++|+++
T Consensus 190 ~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~ 255 (305)
T d1xkua_ 190 SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS 255 (305)
T ss_dssp GGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCC
T ss_conf 7641341330154455332223454334433224302554002-46311033467898989898657
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.2e-35 Score=195.73 Aligned_cols=68 Identities=25% Similarity=0.246 Sum_probs=22.8
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 32364558656586886998897255698879867688871754388762279976668722462633
Q 001439 899 QIGNLTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSVAYNNLSG 966 (1077)
Q Consensus 899 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 966 (1077)
.|.++++|+.+++++|.+++..|..|..+++|+.||+++|++.+..+..+..+++|+++++++|++.+
T Consensus 172 ~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred HHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
T ss_conf 65465634131421143466281676653200023333352210000023554656889811998878
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=9.8e-34 Score=185.97 Aligned_cols=67 Identities=30% Similarity=0.261 Sum_probs=29.2
Q ss_pred CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCCCCEEECCCCCCC
Q ss_conf 3025435527503666588889932249988888984475165458310049999989978688478
Q 001439 750 TFFNCLTLMILDLSYNHLNGNIPDRVDGLSQLSYLILAHNNLEGEVPIQLCRLNQLQLLDLSNNNLH 816 (1077)
Q Consensus 750 ~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 816 (1077)
.|.++++|+.+++++|++++..|..|..+++|++|++++|++.+..+..|..+++|+++++++|++.
T Consensus 172 ~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred HHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
T ss_conf 6546563413142114346628167665320002333335221000002355465688981199887
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.9e-32 Score=178.37 Aligned_cols=163 Identities=26% Similarity=0.247 Sum_probs=111.1
Q ss_pred CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 30254355275036665888899322499888889844751654583100499999899786884787789551257521
Q 001439 750 TFFNCLTLMILDLSYNHLNGNIPDRVDGLSQLSYLILAHNNLEGEVPIQLCRLNQLQLLDLSNNNLHGHIPSCFDNTTLH 829 (1077)
Q Consensus 750 ~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 829 (1077)
.|.++++|+.|++++|+++.. + .++.+++|++|++++|++++ .+..+..+++|+.|++++|.+....+..+..+.
T Consensus 50 ~f~~l~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~-- 124 (266)
T d1p9ag_ 50 TLMPYTRLTQLNLDRAELTKL-Q-VDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG-- 124 (266)
T ss_dssp GGTTCTTCCEEECTTSCCCEE-E-CCSCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCT--
T ss_pred HHHCCCCCCCCCCCCCCCCCC-C-CCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC--
T ss_conf 863456552213566544443-1-11112232111112222211-111212222222222222311011001122221--
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 11368999987653123318876794223322001003651100136757878648777895789894132364558656
Q 001439 830 ERYNNGSSLQPFETSFVIMGGMDVDPKKQILESFDFTTKSITYTYQGRVPSLLSGLDLSCNRLIGHIPPQIGNLTKIQTL 909 (1077)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 909 (1077)
.++.|++++|.+++..+..+..++.++.+
T Consensus 125 ---------------------------------------------------~l~~L~l~~n~l~~l~~~~~~~l~~l~~l 153 (266)
T d1p9ag_ 125 ---------------------------------------------------ELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (266)
T ss_dssp ---------------------------------------------------TCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred ---------------------------------------------------CCCCCCCCCCCCCEECCCCCCCCCCCHHC
T ss_conf ---------------------------------------------------11122124342102212333221110000
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 586886998897255698879867688871754388762279976668722462633488
Q 001439 910 NLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSVAYNNLSGKIP 969 (1077)
Q Consensus 910 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 969 (1077)
++++|++++..+..|..+++|+.|||++|+|+ .+|.++..+++|+.+++++|++.+.+.
T Consensus 154 ~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~CdC~ 212 (266)
T d1p9ag_ 154 SLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (266)
T ss_dssp ECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-CCCHHHCCCCCCCEEEECCCCCCCCCC
T ss_conf 00015652237200134212423430139785-568667778889999836999878864
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.7e-31 Score=173.43 Aligned_cols=110 Identities=28% Similarity=0.313 Sum_probs=43.5
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 86487778957898941323645586565868869988972556988798676888717543887622799766687224
Q 001439 882 LSGLDLSCNRLIGHIPPQIGNLTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSVAY 961 (1077)
Q Consensus 882 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~ 961 (1077)
|+.|++++|.+.+..+..+..+.+++.|++++|.++...+..+..+++|+.+++++|++++..+..+..+++|++|++++
T Consensus 102 L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 181 (266)
T d1p9ag_ 102 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQE 181 (266)
T ss_dssp CCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEECCC
T ss_conf 22222222311011001122221111221243421022123332211100000001565223720013421242343013
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6263348831001377774445678789799
Q 001439 962 NNLSGKIPERAAQFATFNESSYEGNPFLCGP 992 (1077)
Q Consensus 962 N~l~~~~p~~~~~~~~~~~~~~~~N~~~C~~ 992 (1077)
|.++ .+|.....+..+..+.+.||||.|+|
T Consensus 182 N~L~-~lp~~~~~~~~L~~L~L~~Np~~CdC 211 (266)
T d1p9ag_ 182 NSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (266)
T ss_dssp SCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCC-CCCHHHCCCCCCCEEEECCCCCCCCC
T ss_conf 9785-56866777888999983699987886
No 11
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.96 E-value=6.3e-25 Score=140.61 Aligned_cols=55 Identities=31% Similarity=0.487 Sum_probs=26.2
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 455865658688699889725569887986768887175438876227997666872246263
Q 001439 903 LTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSVAYNNLS 965 (1077)
Q Consensus 903 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~ 965 (1077)
+++|++|+|++|.++ .+|.. +++|+.|+|++|+|+ .+|.. +++|+.|++++|+++
T Consensus 283 ~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~ 337 (353)
T d1jl5a_ 283 PPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR 337 (353)
T ss_dssp CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS
T ss_pred CCCCCEEECCCCCCC-CCCCC---CCCCCEEECCCCCCC-CCCCC---CCCCCEEECCCCCCC
T ss_conf 898898979799168-35665---487998989999687-54532---288898987699189
No 12
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.95 E-value=1.9e-24 Score=138.20 Aligned_cols=69 Identities=29% Similarity=0.508 Sum_probs=47.8
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 78786487778957898941323645586565868869988972556988798676888717543887622799766687
Q 001439 879 PSLLSGLDLSCNRLIGHIPPQIGNLTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFS 958 (1077)
Q Consensus 879 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ 958 (1077)
+..|++|+|++|+++ .+|.. +++|+.|+|++|+|+ .+|.. +++|+.|++++|+|+ .+|... .+|+.|.
T Consensus 283 ~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~-~lp~~~---~~L~~L~ 350 (353)
T d1jl5a_ 283 PPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR-EFPDIP---ESVEDLR 350 (353)
T ss_dssp CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-SCCCCC---TTCCEEE
T ss_pred CCCCCEEECCCCCCC-CCCCC---CCCCCEEECCCCCCC-CCCCC---CCCCCEEECCCCCCC-CCCCCC---CCCCEEE
T ss_conf 898898979799168-35665---487998989999687-54532---288898987699189-777652---6567128
Q ss_pred C
Q ss_conf 2
Q 001439 959 V 959 (1077)
Q Consensus 959 l 959 (1077)
+
T Consensus 351 ~ 351 (353)
T d1jl5a_ 351 M 351 (353)
T ss_dssp C
T ss_pred C
T ss_conf 9
No 13
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=4.3e-30 Score=167.20 Aligned_cols=114 Identities=23% Similarity=0.225 Sum_probs=56.0
Q ss_pred CCCEEECCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCCCCCH----HHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHC
Q ss_conf 7767648999888641001333203899986995899979801----368752269988884899968886587510110
Q 001439 102 QLESLDLRDNDIAGCVENEGLERLSRLSNLKMLNLVGNLFNNS----ILSSLARLSSLTSLDLSANRLKGSIDIKGPKRL 177 (1077)
Q Consensus 102 ~L~~L~L~~n~~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l 177 (1077)
+|++||++++++++..-. +.+..+++++.|+|++|.+++. +...+..+++|++||+++|.+.+.....+...+
T Consensus 3 ~l~~ld~~~~~i~~~~~~---~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l 79 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWA---ELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGL 79 (460)
T ss_dssp EEEEEEEESCCCCHHHHH---HHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCHHHHH---HHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHH
T ss_conf 877798208958868999---99976779999982899998899999999985399988897959859728999999998
Q ss_pred C-CCCCCCEEECCCCCCCCHH----HHHHHCCCCCCEEECCCCCCC
Q ss_conf 4-9999869978998789510----475420678857875788788
Q 001439 178 S-RLNNLKVFDLSGNLFNNSI----LSSLARLSSLRSLLLYDNRLE 218 (1077)
Q Consensus 178 ~-~l~~L~~L~Ls~n~l~~~~----~~~l~~l~~L~~L~L~~n~l~ 218 (1077)
. ...+|++|++++|.+++.. +..+..+++|++|++++|.+.
T Consensus 80 ~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 80 QTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp CSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred HCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCH
T ss_conf 4378877887788877543221012110000343200244433202
No 14
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=3.8e-28 Score=157.22 Aligned_cols=114 Identities=17% Similarity=0.166 Sum_probs=49.7
Q ss_pred CCCEEECCCCCCCCHH-HHHHHCCCCCCEEECCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCHHHHHHHC-----
Q ss_conf 9869958999798013-6875226998888489996888658751011049999869978998789510475420-----
Q 001439 130 NLKMLNLVGNLFNNSI-LSSLARLSSLTSLDLSANRLKGSIDIKGPKRLSRLNNLKVFDLSGNLFNNSILSSLAR----- 203 (1077)
Q Consensus 130 ~L~~L~Ls~n~l~~~~-~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~----- 203 (1077)
+|+.||++++++++.. ...+..+++++.|+|++|.++......++..+..+++|++|++++|.++......+..
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCC
T ss_conf 87779820895886899999976779999982899998899999999985399988897959859728999999998437
Q ss_pred CCCCCEEECCCCCCCCCCC---HHHHHCCCCCCEEECCCCCCC
Q ss_conf 6788578757887889757---443300266626506778679
Q 001439 204 LSSLRSLLLYDNRLEGSID---VKEFDSLSNLEELDMSYNEID 243 (1077)
Q Consensus 204 l~~L~~L~L~~n~l~~~~~---~~~l~~l~~L~~L~Ls~n~l~ 243 (1077)
..+|++|++++|.++.... ...+..+++|++|++++|.+.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCH
T ss_conf 8877887788877543221012110000343200244433202
No 15
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=9.1e-25 Score=139.79 Aligned_cols=79 Identities=20% Similarity=0.054 Sum_probs=39.7
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCC-EEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 786487778957898941323645586-5658688699889725569887986768887175438876227997666872
Q 001439 881 LLSGLDLSCNRLIGHIPPQIGNLTKIQ-TLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSV 959 (1077)
Q Consensus 881 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l 959 (1077)
.++.+++++|+++...+..+. ...++ .+++++|.++...+..|.++++|+.|++++|+++...+..|.+++.|+.+++
T Consensus 154 ~l~~L~l~~n~l~~i~~~~~~-~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 154 ESVILWLNKNGIQEIHNCAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 232 (242)
T ss_dssp SCEEEECCSSCCCEECTTTTT-TCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSE
T ss_pred CCEEEECCCCCCCCCCCCCCC-CHHHHCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCC
T ss_conf 100122001233332222222-0111012123543246424788668999998989799289459779737713414767
Q ss_pred C
Q ss_conf 2
Q 001439 960 A 960 (1077)
Q Consensus 960 s 960 (1077)
.
T Consensus 233 ~ 233 (242)
T d1xwdc1 233 Y 233 (242)
T ss_dssp E
T ss_pred C
T ss_conf 8
No 16
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.93 E-value=2.3e-25 Score=142.88 Aligned_cols=180 Identities=22% Similarity=0.272 Sum_probs=120.0
Q ss_pred CCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 52750366658888993224998888898447516545-83100499999899786884787789551257521113689
Q 001439 757 LMILDLSYNHLNGNIPDRVDGLSQLSYLILAHNNLEGE-VPIQLCRLNQLQLLDLSNNNLHGHIPSCFDNTTLHERYNNG 835 (1077)
Q Consensus 757 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~ 835 (1077)
.+.++.++++++ .+|..+. +++++|+|++|++++. .+..|..+++|+.|++++|.+.+..+..+..+.
T Consensus 10 ~~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~-------- 78 (192)
T d1w8aa_ 10 GTTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGAS-------- 78 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCT--------
T ss_pred CCEEEEECCCCC-CCCCCCC--CCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC--------
T ss_conf 999997089967-0298989--78788984898775530200257876272130136322121212221122--------
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 99987653123318876794223322001003651100136757878648777895789894132364558656586886
Q 001439 836 SSLQPFETSFVIMGGMDVDPKKQILESFDFTTKSITYTYQGRVPSLLSGLDLSCNRLIGHIPPQIGNLTKIQTLNLSHNN 915 (1077)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 915 (1077)
.|+.|+|++|++++..|..|.++++|++|+|++|.
T Consensus 79 ---------------------------------------------~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~ 113 (192)
T d1w8aa_ 79 ---------------------------------------------HIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQ 113 (192)
T ss_dssp ---------------------------------------------TCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSC
T ss_pred ---------------------------------------------CCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCC
T ss_conf ---------------------------------------------22101003553443497998079746552457745
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99889725569887986768887175438876227997666872246263348831001377774445678789799998
Q 001439 916 LAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSVAYNNLSGKIPERAAQFATFNESSYEGNPFLCGPPLP 995 (1077)
Q Consensus 916 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~~N~~~C~~~~~ 995 (1077)
|+++.|+.|..+++|++|+|++|.+.+..+..+ -...++...+..|.+.+..|. .+....-.++..|.+.|.++..
T Consensus 114 l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~-~~~~l~~~~l~~~~~~c~~p~---~l~~~~l~~L~~n~l~C~~~~~ 189 (192)
T d1w8aa_ 114 ISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW-FAEWLRKKSLNGGAARCGAPS---KVRDVQIKDLPHSEFKCSSENS 189 (192)
T ss_dssp CCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH-HHHHHHHHCCSGGGCBBCSST---TTTTSBGGGSCTTTCCCCCC--
T ss_pred CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHCCCCCCEEECCCH---HHCCCEEEECCHHHCCCCCCCC
T ss_conf 353597785687533420003644343530277-764235403568982768984---3369886144875575899888
Q ss_pred C
Q ss_conf 9
Q 001439 996 I 996 (1077)
Q Consensus 996 ~ 996 (1077)
.
T Consensus 190 ~ 190 (192)
T d1w8aa_ 190 E 190 (192)
T ss_dssp -
T ss_pred C
T ss_conf 8
No 17
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=2.2e-24 Score=137.83 Aligned_cols=53 Identities=11% Similarity=0.003 Sum_probs=29.2
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 87778957898941323645586565868869988972556988798676888
Q 001439 885 LDLSCNRLIGHIPPQIGNLTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDLSY 937 (1077)
Q Consensus 885 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 937 (1077)
+++++|+++...+..|.++++|++|+|++|+++...+..|.++++|+.+++.+
T Consensus 182 ~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 182 NLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp ECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEES
T ss_pred CCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCCCC
T ss_conf 12354324642478866899999898979928945977973771341476788
No 18
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.92 E-value=1.3e-23 Score=133.85 Aligned_cols=74 Identities=22% Similarity=0.335 Sum_probs=36.2
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 78648777895789894132364558656586886998897255698879867688871754388762279976668722
Q 001439 881 LLSGLDLSCNRLIGHIPPQIGNLTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSVA 960 (1077)
Q Consensus 881 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls 960 (1077)
.++.|++++|.+++. ..+.++++|+.|+|++|.+++. +. ++.+++|+.|++++|+++...| +..+++|+.++++
T Consensus 152 ~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~n~l~~l-~~-l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 152 NLQYLSIGNAQVSDL--TPLANLSKLTTLKADDNKISDI-SP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (227)
T ss_dssp TCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred CCCCCCCCCCCCCCC--HHHCCCCCCEECCCCCCCCCCC-HH-HCCCCCCCEEECCCCCCCCCCC--CCCCCCCCEEEEE
T ss_conf 110023333333310--0105646335644588841778-53-4479999989795996899802--0369998989712
No 19
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.91 E-value=4.8e-24 Score=136.07 Aligned_cols=18 Identities=17% Similarity=0.493 Sum_probs=6.4
Q ss_pred CCCCCCCCEEECCCCCCC
Q ss_conf 236455865658688699
Q 001439 900 IGNLTKIQTLNLSHNNLA 917 (1077)
Q Consensus 900 ~~~l~~L~~L~Ls~N~l~ 917 (1077)
+.++++|++|+|++|+++
T Consensus 191 l~~l~~L~~L~Ls~N~lt 208 (227)
T d1h6ua2 191 LASLPNLIEVHLKNNQIS 208 (227)
T ss_dssp GGGCTTCCEEECTTSCCC
T ss_pred HCCCCCCCEEECCCCCCC
T ss_conf 447999998979599689
No 20
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.90 E-value=1.2e-23 Score=133.97 Aligned_cols=85 Identities=28% Similarity=0.406 Sum_probs=33.8
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 86487778957898941323645586565868869988972556988798676888717543887622799766687224
Q 001439 882 LSGLDLSCNRLIGHIPPQIGNLTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSVAY 961 (1077)
Q Consensus 882 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~ 961 (1077)
|+.|+|++|.+.+..+..|..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..|..|..+++|+++++++
T Consensus 56 L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~ 135 (192)
T d1w8aa_ 56 LVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLAS 135 (192)
T ss_dssp CCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTT
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC
T ss_conf 72130136322121212221122221010035534434979980797465524577453535977856875334200036
Q ss_pred CCCCC
Q ss_conf 62633
Q 001439 962 NNLSG 966 (1077)
Q Consensus 962 N~l~~ 966 (1077)
|++.+
T Consensus 136 N~~~~ 140 (192)
T d1w8aa_ 136 NPFNC 140 (192)
T ss_dssp CCBCC
T ss_pred CCCCC
T ss_conf 44343
No 21
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=4.5e-23 Score=131.08 Aligned_cols=60 Identities=25% Similarity=0.297 Sum_probs=30.2
Q ss_pred CCCCCEEECCCCC-CCCCCCCCCCCCCCCCCCCEEECCCC-CCCCCCHHHHCCCCCCCEEECCCC
Q ss_conf 8997577234575-88885455556558877467983587-578974031107998749936797
Q 001439 334 MPSIQYLSLSNSS-VSNNSRTLDQGLCPLVHLQELHMADN-DLRGSLPWCLANMTSLRILDVSSN 396 (1077)
Q Consensus 334 l~~L~~L~L~~~~-~~~~~~~~~~~l~~l~~L~~L~L~~n-~l~~~~~~~l~~l~~L~~L~L~~n 396 (1077)
+++|++|++++|. +++.... .+..+++|++|++++| .+++.....++++++|+.|+++++
T Consensus 174 ~~~L~~L~L~~~~~itd~~~~---~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 174 CPNLVHLDLSDSVMLKNDCFQ---EFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp CTTCSEEECTTCTTCCGGGGG---GGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCCCCCCCCCCCCCCHHHH---HHCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEEEECC
T ss_conf 222123553223477830333---32135768779899999787378999726999898964488
No 22
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.89 E-value=6.5e-22 Score=125.10 Aligned_cols=74 Identities=28% Similarity=0.414 Sum_probs=36.6
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 78648777895789894132364558656586886998897255698879867688871754388762279976668722
Q 001439 881 LLSGLDLSCNRLIGHIPPQIGNLTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSVA 960 (1077)
Q Consensus 881 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls 960 (1077)
.++.+++++|.+++ +..+..+++|+.+++++|.+++.. .+.++++|+.|++++|+++. +| .+..+++|++|+++
T Consensus 135 ~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i~--~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 135 QLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIV--PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELF 208 (210)
T ss_dssp TCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEE
T ss_pred CCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCEEECCCCCCCC-CH-HHCCCCCCCEEECC
T ss_conf 12221122233345--431000133210013464302564--53678989999897998998-72-11699998999711
No 23
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=2.5e-23 Score=132.38 Aligned_cols=13 Identities=15% Similarity=0.192 Sum_probs=4.9
Q ss_pred CCCCCCEEECCCC
Q ss_conf 8877467983587
Q 001439 360 PLVHLQELHMADN 372 (1077)
Q Consensus 360 ~l~~L~~L~L~~n 372 (1077)
++++|+.|++.++
T Consensus 223 ~~~~L~~L~l~~~ 235 (284)
T d2astb2 223 EIPTLKTLQVFGI 235 (284)
T ss_dssp GCTTCCEEECTTS
T ss_pred CCCCCCEEEEECC
T ss_conf 6999898964488
No 24
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.86 E-value=3.4e-21 Score=121.38 Aligned_cols=93 Identities=23% Similarity=0.201 Sum_probs=34.8
Q ss_pred CCCCCCCCEEECCCCCCCCHHHHH----HHCCCCCCEEECCCCCCCCCCC------CCCHHHCCCCCCCCEEECCCCCCC
Q ss_conf 038999869958999798013687----5226998888489996888658------751011049999869978998789
Q 001439 125 LSRLSNLKMLNLVGNLFNNSILSS----LARLSSLTSLDLSANRLKGSID------IKGPKRLSRLNNLKVFDLSGNLFN 194 (1077)
Q Consensus 125 l~~l~~L~~L~Ls~n~l~~~~~~~----l~~l~~L~~L~Ls~n~l~~~~~------~~~~~~l~~l~~L~~L~Ls~n~l~ 194 (1077)
+.....++.|+|++|.++...... +...++|+.++++++....... ..+...+..+++|++|++++|.+.
T Consensus 27 L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 106 (344)
T d2ca6a1 27 LLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFG 106 (344)
T ss_dssp HHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCC
T ss_pred HHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 96389978897849837789999999999858998888887775433454210678799988754777563300001345
Q ss_pred CHH----HHHHHCCCCCCEEECCCCCC
Q ss_conf 510----47542067885787578878
Q 001439 195 NSI----LSSLARLSSLRSLLLYDNRL 217 (1077)
Q Consensus 195 ~~~----~~~l~~l~~L~~L~L~~n~l 217 (1077)
... ...+..+++|++|++++|.+
T Consensus 107 ~~~~~~l~~~l~~~~~L~~L~l~~n~l 133 (344)
T d2ca6a1 107 PTAQEPLIDFLSKHTPLEHLYLHNNGL 133 (344)
T ss_dssp TTTHHHHHHHHHHCTTCCEEECCSSCC
T ss_pred CCCCCCHHHHHCCCCCCHHEECCCCCC
T ss_conf 543331011100234321000002466
No 25
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.86 E-value=2.2e-20 Score=117.22 Aligned_cols=34 Identities=35% Similarity=0.682 Sum_probs=11.9
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 236455865658688699889725569887986768
Q 001439 900 IGNLTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDL 935 (1077)
Q Consensus 900 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 935 (1077)
+.++++|+.|+|++|.++. +| .+..+++|+.|+|
T Consensus 174 l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L 207 (210)
T d1h6ta2 174 LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLEL 207 (210)
T ss_dssp GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEE
T ss_pred CCCCCCCCEEECCCCCCCC-CH-HHCCCCCCCEEEC
T ss_conf 3678989999897998998-72-1169999899971
No 26
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.85 E-value=2.6e-20 Score=116.84 Aligned_cols=17 Identities=53% Similarity=0.749 Sum_probs=5.7
Q ss_pred CCCCCCCEEECCCCCCC
Q ss_conf 69887986768887175
Q 001439 925 SNLRNIESLDLSYNKLS 941 (1077)
Q Consensus 925 ~~l~~L~~L~Ls~N~l~ 941 (1077)
+++++|+.|++++|+++
T Consensus 169 ~~l~~L~~L~ls~N~i~ 185 (199)
T d2omxa2 169 ANLTTLERLDISSNKVS 185 (199)
T ss_dssp TTCTTCCEEECCSSCCC
T ss_pred CCCCCCCEEECCCCCCC
T ss_conf 67998999978799799
No 27
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.84 E-value=1.7e-20 Score=117.77 Aligned_cols=100 Identities=16% Similarity=0.149 Sum_probs=58.9
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCCCCC---H-------HHHHHHCCCCCCEEECCCCCC
Q ss_conf 256686776764899988864100133320389998699589997980---1-------368752269988884899968
Q 001439 96 LFTPFQQLESLDLRDNDIAGCVENEGLERLSRLSNLKMLNLVGNLFNN---S-------ILSSLARLSSLTSLDLSANRL 165 (1077)
Q Consensus 96 ~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~---~-------~~~~l~~l~~L~~L~Ls~n~l 165 (1077)
.+.....++.|++++|.+...........+...++|+.++++++.... . +...+..+++|++|++++|.+
T Consensus 26 ~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i 105 (344)
T d2ca6a1 26 VLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAF 105 (344)
T ss_dssp HHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCC
T ss_pred HHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99638997889784983778999999999985899888888777543345421067879998875477756330000134
Q ss_pred CCCCCCCCHHHCCCCCCCCEEECCCCCCCC
Q ss_conf 886587510110499998699789987895
Q 001439 166 KGSIDIKGPKRLSRLNNLKVFDLSGNLFNN 195 (1077)
Q Consensus 166 ~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~ 195 (1077)
.......+...+..+++|++|++++|.+..
T Consensus 106 ~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~ 135 (344)
T d2ca6a1 106 GPTAQEPLIDFLSKHTPLEHLYLHNNGLGP 135 (344)
T ss_dssp CTTTHHHHHHHHHHCTTCCEEECCSSCCHH
T ss_pred CCCCCCCHHHHHCCCCCCHHEECCCCCCCC
T ss_conf 554333101110023432100000246666
No 28
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=3.6e-18 Score=105.86 Aligned_cols=112 Identities=22% Similarity=0.204 Sum_probs=57.1
Q ss_pred CCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCHHHHHHHCC
Q ss_conf 03899986995899979801368752269988884899968886587510110499998699789987895104754206
Q 001439 125 LSRLSNLKMLNLVGNLFNNSILSSLARLSSLTSLDLSANRLKGSIDIKGPKRLSRLNNLKVFDLSGNLFNNSILSSLARL 204 (1077)
Q Consensus 125 l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l 204 (1077)
+.+...+|+|+|++|.++. ++..+..+++|++|++++|.+... ..+..+++|++|++++|.++...+..+..+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~l------~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l 86 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL------DGFPLLRRLKTLLVNNNRICRIGEGLDQAL 86 (162)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE------CCCCCCSSCCEEECCSSCCCEECSCHHHHC
T ss_pred CCCCCCCCEEECCCCCCCC-CCCCCCCCCCCCEEECCCCCCCCC------CCCCCCCCHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 1685748489788997886-576200414599898979978764------774457613064310213457776322334
Q ss_pred CCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCC
Q ss_conf 788578757887889757443300266626506778679
Q 001439 205 SSLRSLLLYDNRLEGSIDVKEFDSLSNLEELDMSYNEID 243 (1077)
Q Consensus 205 ~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~Ls~n~l~ 243 (1077)
++|++|++++|.+........+..+++|+++++++|.++
T Consensus 87 ~~L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 87 PDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp TTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 534434203000166542110013653206640799634
No 29
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3.4e-18 Score=106.00 Aligned_cols=14 Identities=21% Similarity=0.313 Sum_probs=4.6
Q ss_pred CCCCCEEECCCCCC
Q ss_conf 88798676888717
Q 001439 927 LRNIESLDLSYNKL 940 (1077)
Q Consensus 927 l~~L~~L~Ls~N~l 940 (1077)
+++|+.|++++|.+
T Consensus 111 l~~L~~L~l~~N~i 124 (162)
T d1a9na_ 111 LKSLTYLCILRNPV 124 (162)
T ss_dssp CTTCCEEECCSSGG
T ss_pred CCCCCHHHCCCCCC
T ss_conf 65320664079963
No 30
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=3.4e-17 Score=100.82 Aligned_cols=87 Identities=18% Similarity=0.165 Sum_probs=46.3
Q ss_pred CCCEEECCCCC-CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 78648777895-78989413236455865658688699889725569887986768887175438876227997666872
Q 001439 881 LLSGLDLSCNR-LIGHIPPQIGNLTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSV 959 (1077)
Q Consensus 881 ~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l 959 (1077)
.++.|++++|+ ++...+..|.++++|+.|+|++|+|+.+.|..|..+++|+.|+|++|+|+...+..+.. ..|+.+++
T Consensus 32 ~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~-~~l~~L~L 110 (156)
T d2ifga3 32 NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG-LSLQELVL 110 (156)
T ss_dssp CCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS-CCCCEEEC
T ss_pred CCCEEECCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHCC-CCCCCCCC
T ss_conf 65743168986644369212256666672162021247742011124554333322678785157456335-32124335
Q ss_pred CCCCCCCCC
Q ss_conf 246263348
Q 001439 960 AYNNLSGKI 968 (1077)
Q Consensus 960 s~N~l~~~~ 968 (1077)
++|++.+..
T Consensus 111 ~~Np~~C~C 119 (156)
T d2ifga3 111 SGNPLHCSC 119 (156)
T ss_dssp CSSCCCCCG
T ss_pred CCCCCCCCC
T ss_conf 798633881
No 31
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.67 E-value=2.6e-16 Score=96.26 Aligned_cols=80 Identities=31% Similarity=0.424 Sum_probs=27.3
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC-CCCCCCCCCCEEECCC
Q ss_conf 648777895789894132364558656586886998897255698879867688871754388-7622799766687224
Q 001439 883 SGLDLSCNRLIGHIPPQIGNLTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIP-YQLVELNTLAVFSVAY 961 (1077)
Q Consensus 883 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~l~ls~ 961 (1077)
+.|++++|.++ .+|+.++.+++|+.|++++|.+++. | .+..+++|+.|++++|+++.... ..+..+++|+.+++++
T Consensus 23 ~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~~L~l~~ 99 (124)
T d1dcea3 23 THLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQG 99 (124)
T ss_dssp CEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTT
T ss_pred CEEECCCCCCC-CCHHHHHHHHCCCCCCCCCCCCCCC-C-CCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCEEECCC
T ss_conf 98979787168-6521565543135453243211235-7-4123355576888898658888825653799999998979
Q ss_pred CCCC
Q ss_conf 6263
Q 001439 962 NNLS 965 (1077)
Q Consensus 962 N~l~ 965 (1077)
|+++
T Consensus 100 N~i~ 103 (124)
T d1dcea3 100 NSLC 103 (124)
T ss_dssp SGGG
T ss_pred CCCC
T ss_conf 9688
No 32
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.67 E-value=5.2e-16 Score=94.71 Aligned_cols=14 Identities=29% Similarity=0.164 Sum_probs=4.6
Q ss_pred HCCCCCCEEECCCC
Q ss_conf 00266626506778
Q 001439 227 DSLSNLEELDMSYN 240 (1077)
Q Consensus 227 ~~l~~L~~L~Ls~n 240 (1077)
..+++|+.+++++|
T Consensus 87 ~~~~~L~~L~l~~N 100 (124)
T d1dcea3 87 VSCPRLVLLNLQGN 100 (124)
T ss_dssp GGCTTCCEEECTTS
T ss_pred CCCCCCCEEECCCC
T ss_conf 37999999989799
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.63 E-value=2.5e-18 Score=106.65 Aligned_cols=107 Identities=30% Similarity=0.380 Sum_probs=37.6
Q ss_pred CCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCHHHHHHHCC
Q ss_conf 03899986995899979801368752269988884899968886587510110499998699789987895104754206
Q 001439 125 LSRLSNLKMLNLVGNLFNNSILSSLARLSSLTSLDLSANRLKGSIDIKGPKRLSRLNNLKVFDLSGNLFNNSILSSLARL 204 (1077)
Q Consensus 125 l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l 204 (1077)
+..+++|++|++++|.++. + +.+..+++|++|++++|.+.. ++ .....+++|++|++++|.++. ...+.++
T Consensus 44 l~~L~~L~~L~Ls~n~I~~-i-~~l~~l~~L~~L~Ls~N~i~~-i~----~~~~~~~~L~~L~l~~N~i~~--l~~~~~l 114 (198)
T d1m9la_ 44 LSTLKACKHLALSTNNIEK-I-SSLSGMENLRILSLGRNLIKK-IE----NLDAVADTLEELWISYNQIAS--LSGIEKL 114 (198)
T ss_dssp HHHTTTCCEEECSEEEESC-C-CCHHHHTTCCEEECCEEEECS-CS----SHHHHHHHCCEEECSEEECCC--HHHHHHH
T ss_pred HHCCCCCCEEECCCCCCCC-C-CCCCCCCCCCCHHHCCCCCCC-CC----CCCCCCCCCCCCCCCCCCCCC--CCCCCCC
T ss_conf 7626046151994468998-6-442478253573413534321-00----003322123333333322222--2222222
Q ss_pred CCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCC
Q ss_conf 788578757887889757443300266626506778
Q 001439 205 SSLRSLLLYDNRLEGSIDVKEFDSLSNLEELDMSYN 240 (1077)
Q Consensus 205 ~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~Ls~n 240 (1077)
++|+.|++++|.+........+..+++|+.|++++|
T Consensus 115 ~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N 150 (198)
T d1m9la_ 115 VNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGN 150 (198)
T ss_dssp HHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSS
T ss_pred CCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCC
T ss_conf 234111234102125542212367776302342798
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.61 E-value=2.5e-17 Score=101.54 Aligned_cols=112 Identities=29% Similarity=0.371 Sum_probs=61.8
Q ss_pred HHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCH
Q ss_conf 13687522699888848999688865875101104999986997899878951047542067885787578878897574
Q 001439 144 SILSSLARLSSLTSLDLSANRLKGSIDIKGPKRLSRLNNLKVFDLSGNLFNNSILSSLARLSSLRSLLLYDNRLEGSIDV 223 (1077)
Q Consensus 144 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 223 (1077)
.++.+++.+++|++|++++|.+.. ++ .+..+++|++|++++|.++. ++.....+++|+.|++++|.+.. .
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~~-i~-----~l~~l~~L~~L~Ls~N~i~~-i~~~~~~~~~L~~L~l~~N~i~~---l 108 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIEK-IS-----SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIAS---L 108 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEESC-CC-----CHHHHTTCCEEECCEEEECS-CSSHHHHHHHCCEEECSEEECCC---H
T ss_pred HHHHHHHCCCCCCEEECCCCCCCC-CC-----CCCCCCCCCCHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC---C
T ss_conf 024677626046151994468998-64-----42478253573413534321-00003322123333333322222---2
Q ss_pred HHHHCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCEEEECCC
Q ss_conf 433002666265067786798740211037756654430134
Q 001439 224 KEFDSLSNLEELDMSYNEIDNFEVPQACSGLRKLSYLHLLRV 265 (1077)
Q Consensus 224 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~~ 265 (1077)
..+..+++|+.|++++|+++++.....+..+++|+.|++.++
T Consensus 109 ~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N 150 (198)
T d1m9la_ 109 SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGN 150 (198)
T ss_dssp HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSS
T ss_pred CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCC
T ss_conf 222222234111234102125542212367776302342798
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=4.9e-15 Score=89.71 Aligned_cols=111 Identities=17% Similarity=0.237 Sum_probs=86.6
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCEEECCCC-CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 864877789578989413236455865658688-6998897255698879867688871754388762279976668722
Q 001439 882 LSGLDLSCNRLIGHIPPQIGNLTKIQTLNLSHN-NLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSVA 960 (1077)
Q Consensus 882 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls 960 (1077)
.+.++.+++++. ..|..+..+++|++|++++| .++.+.+..|.++++|+.|++++|+|+...+..|..+++|+.|+++
T Consensus 10 ~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls 88 (156)
T d2ifga3 10 SSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (156)
T ss_dssp SSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CCEEEECCCCCC-CCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECC
T ss_conf 996985289976-5860025765657431689866443692122566666721620212477420111245543333226
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 4626334883100137777444567878979999
Q 001439 961 YNNLSGKIPERAAQFATFNESSYEGNPFLCGPPL 994 (1077)
Q Consensus 961 ~N~l~~~~p~~~~~~~~~~~~~~~~N~~~C~~~~ 994 (1077)
+|+++...+..+ +...+..+.+.+||+.|+|.+
T Consensus 89 ~N~l~~l~~~~~-~~~~l~~L~L~~Np~~C~C~~ 121 (156)
T d2ifga3 89 FNALESLSWKTV-QGLSLQELVLSGNPLHCSCAL 121 (156)
T ss_dssp SSCCSCCCSTTT-CSCCCCEEECCSSCCCCCGGG
T ss_pred CCCCCCCCHHHH-CCCCCCCCCCCCCCCCCCCHH
T ss_conf 787851574563-353212433579863388117
No 36
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.03 E-value=7e-10 Score=63.17 Aligned_cols=45 Identities=11% Similarity=0.177 Sum_probs=17.2
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCC
Q ss_conf 269988884899968886587510110499998699789987895
Q 001439 151 RLSSLTSLDLSANRLKGSIDIKGPKRLSRLNNLKVFDLSGNLFNN 195 (1077)
Q Consensus 151 ~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~ 195 (1077)
..+.|++|++++|.+.......+...+...+.|++|++++|.++.
T Consensus 42 ~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~ 86 (167)
T d1pgva_ 42 NSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 86 (167)
T ss_dssp TCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHCCH
T ss_conf 377645401201562156798875310002343300330102145
No 37
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.86 E-value=7.3e-09 Score=57.95 Aligned_cols=118 Identities=10% Similarity=0.084 Sum_probs=67.1
Q ss_pred CCCCCCCEEECCCC-CCCCCCCCHHHHHCCCCCCCCEEECCCCCCCCHH----HHHHHCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 66867767648999-8886410013332038999869958999798013----687522699888848999688865875
Q 001439 98 TPFQQLESLDLRDN-DIAGCVENEGLERLSRLSNLKMLNLVGNLFNNSI----LSSLARLSSLTSLDLSANRLKGSIDIK 172 (1077)
Q Consensus 98 ~~l~~L~~L~L~~n-~~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~----~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 172 (1077)
...+.|+.|+|+++ .++.......+..+...++|++|++++|.+++.. ...+...+.|++|++++|.+.+.....
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred HCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHCCHHHHHH
T ss_conf 28999819782799998989999999997637764540120156215679887531000234330033010214599999
Q ss_pred CHHHCCCCCCCCEEECCCCCCCCH-------HHHHHHCCCCCCEEECCCC
Q ss_conf 101104999986997899878951-------0475420678857875788
Q 001439 173 GPKRLSRLNNLKVFDLSGNLFNNS-------ILSSLARLSSLRSLLLYDN 215 (1077)
Q Consensus 173 ~~~~l~~l~~L~~L~Ls~n~l~~~-------~~~~l~~l~~L~~L~L~~n 215 (1077)
+...+...+.|++|++++|.+... +...+...+.|+.|+++.+
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred HHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCC
T ss_conf 99999848938987788776888657999999999972998538648688
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.84 E-value=5e-10 Score=63.91 Aligned_cols=125 Identities=24% Similarity=0.244 Sum_probs=0.0
Q ss_pred CCCCEEECCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHCCCC
Q ss_conf 67767648999888641001333203899986995899979801368752269988884899968886587510110499
Q 001439 101 QQLESLDLRDNDIAGCVENEGLERLSRLSNLKMLNLVGNLFNNSILSSLARLSSLTSLDLSANRLKGSIDIKGPKRLSRL 180 (1077)
Q Consensus 101 ~~L~~L~L~~n~~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~l 180 (1077)
...+.|+++..... ..+..+..+..++...+... .+.....++++|++|++++|+++...+. +..+..+
T Consensus 22 ~~~~~Ldls~l~~~--------~~l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~--~~~~~~l 90 (162)
T d1koha1 22 GSQQALDLKGLRSD--------PDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDM--SSIVQKA 90 (162)
T ss_dssp SSSCCBCCCCCSSC--------TTTTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGG--GTHHHHS
T ss_pred HHHCEEECCCCCCC--------CHHHHCCCHHHCCHHHHHHH-HHHHHHHHCCCCCEEECCCCCCCCCCHH--HHHHHHC
T ss_conf 33086534359898--------21554664011225556766-6078897487878863777666677315--8898658
Q ss_pred CCCCEEECCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCHHH------HHCCCCCCEEE
Q ss_conf 998699789987895104754206788578757887889757443------30026662650
Q 001439 181 NNLKVFDLSGNLFNNSILSSLARLSSLRSLLLYDNRLEGSIDVKE------FDSLSNLEELD 236 (1077)
Q Consensus 181 ~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~------l~~l~~L~~L~ 236 (1077)
++|+.|++++|.+++...-.......|+.+++++|.+........ +..+++|+.||
T Consensus 91 ~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 91 PNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp TTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEC
T ss_conf 85610004357213423442220331042664899767676661569999999889978799
No 39
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=98.81 E-value=7.5e-09 Score=57.87 Aligned_cols=43 Identities=23% Similarity=0.285 Sum_probs=15.9
Q ss_pred CCCCEEECCC-CCCCCCCCCHHHHHCCCCCCCCEEECCCCCCCC
Q ss_conf 6776764899-988864100133320389998699589997980
Q 001439 101 QQLESLDLRD-NDIAGCVENEGLERLSRLSNLKMLNLVGNLFNN 143 (1077)
Q Consensus 101 ~~L~~L~L~~-n~~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~ 143 (1077)
+.|++|++++ +.++..........+...++|++|++++|.++.
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~ 60 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSND 60 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCH
T ss_pred CCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCH
T ss_conf 99868876899998989999999888419825743015896117
No 40
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=98.51 E-value=1e-07 Score=51.99 Aligned_cols=88 Identities=17% Similarity=0.186 Sum_probs=42.4
Q ss_pred CCCCCCCCEEECCC-CCCCCHH----HHHHHCCCCCCEEECCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCHHH-
Q ss_conf 03899986995899-9798013----68752269988884899968886587510110499998699789987895104-
Q 001439 125 LSRLSNLKMLNLVG-NLFNNSI----LSSLARLSSLTSLDLSANRLKGSIDIKGPKRLSRLNNLKVFDLSGNLFNNSIL- 198 (1077)
Q Consensus 125 l~~l~~L~~L~Ls~-n~l~~~~----~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~- 198 (1077)
..+.+.|++|++++ +.++... ...+...++|++|++++|.+.......+...+...+.++.+++++|.+.....
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~ 92 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 92 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HHCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHH
T ss_conf 95599986887689999898999999988841982574301589611778999998775212210121025432201478
Q ss_pred ---HHHHCCCCCCEEEC
Q ss_conf ---75420678857875
Q 001439 199 ---SSLARLSSLRSLLL 212 (1077)
Q Consensus 199 ---~~l~~l~~L~~L~L 212 (1077)
..+...+.|+.+++
T Consensus 93 ~l~~~l~~~~~L~~l~L 109 (166)
T d1io0a_ 93 ALVEALQSNTSLIELRI 109 (166)
T ss_dssp HHHHGGGGCSSCCEEEC
T ss_pred HHHHHHHHCCCCCEEEE
T ss_conf 89999984865247732
Done!